BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (178 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat... 372 e-102 UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S... 285 4e-76 UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulat... 218 5e-56 UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria... 181 8e-45 UniRef50_A1JM20 Putative DNA-binding protein n=1 Tax=Yersinia en... 159 5e-38 UniRef50_Q2BZH4 Transcriptional regulator, HTH_3 family protein ... 149 4e-35 UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid... 147 1e-34 UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R... 144 9e-34 UniRef50_Q484W4 DNA-binding protein n=1 Tax=Colwellia psychreryt... 142 5e-33 UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax... 137 1e-31 UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ... 137 2e-31 UniRef50_A6F756 DNA-binding protein n=1 Tax=Moritella sp. PE36 R... 136 3e-31 UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi... 135 7e-31 UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacil... 134 2e-30 UniRef50_B1HN87 Transcriptional regulator n=2 Tax=Bacillaceae Re... 133 2e-30 UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost... 131 1e-29 UniRef50_B4RY23 Transcriptional regulator, HTH_3 family protein ... 130 2e-29 UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacill... 125 7e-28 UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD 124 1e-27 UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin... 124 2e-27 UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1... 122 4e-27 UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0... 121 1e-26 UniRef50_A4C3V5 DNA-binding protein n=1 Tax=Pseudoalteromonas tu... 119 3e-26 UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph... 119 3e-26 UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=My... 119 4e-26 UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Cl... 119 4e-26 UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID... 118 9e-26 UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Pr... 117 2e-25 UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicu... 116 3e-25 UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl... 116 4e-25 UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Ha... 115 5e-25 UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me... 115 9e-25 UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clos... 114 1e-24 UniRef50_Q49XM3 Predicted transcriptional regulator n=1 Tax=Stap... 112 6e-24 UniRef50_C0C4F2 Putative uncharacterized protein n=2 Tax=Clostri... 109 3e-23 UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B... 108 1e-22 UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira Rep... 105 6e-22 UniRef50_D2JL57 DNA-binding protein, putative n=1 Tax=Staphyloco... 103 3e-21 UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Pr... 103 4e-21 UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusob... 103 4e-21 UniRef50_C4Z9Q8 Putative uncharacterized protein n=3 Tax=Clostri... 102 8e-21 UniRef50_UPI00005895B5 truncated transcriptional regulator n=1 T... 101 9e-21 UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Bu... 100 3e-20 UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Bu... 100 3e-20 UniRef50_B7IJ03 DNA-binding protein n=74 Tax=Bacillus RepID=B7IJ... 99 5e-20 UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus ... 96 6e-19 UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ... 96 7e-19 UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus claus... 93 3e-18 UniRef50_UPI0001C36321 DNA-binding protein, putative n=1 Tax=Clo... 93 5e-18 UniRef50_B8EMC1 Transcriptional regulator, XRE family n=1 Tax=Me... 92 6e-18 UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseu... 92 1e-17 UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostri... 91 1e-17 UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostri... 91 2e-17 UniRef50_C8WYG8 Transcriptional regulator, XRE family n=2 Tax=Al... 91 2e-17 UniRef50_C5RJ85 Transcriptional regulator, XRE family n=1 Tax=Cl... 90 4e-17 UniRef50_C9KMM8 Putative transcriptional regulator n=1 Tax=Mitsu... 88 1e-16 UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahe... 87 2e-16 UniRef50_Q1R0K7 Transcriptional regulator, XRE family n=1 Tax=Ch... 87 3e-16 UniRef50_B9L7E6 Helix-turn-helix protein n=1 Tax=Nautilia profun... 86 4e-16 UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hy... 84 2e-15 UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=B... 84 3e-15 UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M... 84 3e-15 UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax... 83 3e-15 UniRef50_D0LSP1 Transcriptional regulator, XRE family n=1 Tax=Ha... 81 1e-14 UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin... 80 2e-14 UniRef50_B8IHD2 Transcriptional regulator, XRE family n=13 Tax=A... 80 3e-14 UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba... 80 3e-14 UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin... 79 5e-14 UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi... 79 6e-14 UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Ma... 79 7e-14 UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH... 79 8e-14 UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre... 78 1e-13 UniRef50_B1HMP7 Transcriptional regulator n=2 Tax=Bacillaceae Re... 78 1e-13 UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th... 78 1e-13 UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Ga... 78 1e-13 UniRef50_D2BA96 Putative transcriptional regulator, XRE family n... 78 2e-13 UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin... 78 2e-13 UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales ... 78 2e-13 UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar... 77 2e-13 UniRef50_A9FKR7 DNA-binding protein n=2 Tax=Myxococcales RepID=A... 76 4e-13 UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh... 76 4e-13 UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re... 76 5e-13 UniRef50_A1RRK6 Transcriptional regulator, XRE family n=3 Tax=Th... 76 5e-13 UniRef50_C9NG53 Transcriptional regulator, XRE family n=3 Tax=Ac... 75 6e-13 UniRef50_C9ZEI0 Putative DNA-binding protein n=1 Tax=Streptomyce... 75 8e-13 UniRef50_A8U412 Transcriptional regulator, XRE family with cupin... 75 8e-13 UniRef50_C1B633 Putative uncharacterized protein n=1 Tax=Rhodoco... 75 1e-12 UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Pr... 75 1e-12 UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl... 75 1e-12 UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a... 74 2e-12 UniRef50_A6V7P4 DNA-binding protein n=45 Tax=Bacteria RepID=A6V7... 74 3e-12 UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Ta... 74 3e-12 UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepI... 73 5e-12 UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=... 72 9e-12 UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax... 72 1e-11 UniRef50_D0L2V7 Helix-turn-helix domain protein n=1 Tax=Gordonia... 72 1e-11 UniRef50_D2B674 Putative transcriptional regulator, XRE family n... 72 1e-11 UniRef50_Q9R6H1 Tiorf88 protein n=1 Tax=Agrobacterium tumefacien... 71 1e-11 UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni... 71 1e-11 UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Ac... 71 2e-11 UniRef50_A3MUA0 Transcriptional regulator, XRE family n=1 Tax=Py... 71 2e-11 UniRef50_C2LK61 Transcriptional regulator n=4 Tax=Enterobacteria... 71 2e-11 UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=B... 70 2e-11 UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me... 70 2e-11 UniRef50_C7PXU7 Transcriptional regulator, XRE family n=1 Tax=Ca... 70 3e-11 UniRef50_A4X7C8 Helix-turn-helix domain protein n=1 Tax=Salinisp... 70 3e-11 UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=... 70 3e-11 UniRef50_C8XHM1 Transcriptional regulator, XRE family n=2 Tax=Fr... 70 4e-11 UniRef50_UPI0000557893 COG1396: Predicted transcriptional regula... 70 4e-11 UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1... 69 5e-11 UniRef50_C9ND81 Transcriptional regulator, XRE family n=1 Tax=St... 69 6e-11 UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus... 69 7e-11 UniRef50_UPI0001AEDAD5 hypothetical protein SalbJ_26149 n=1 Tax=... 69 7e-11 UniRef50_B6A104 Transcriptional regulator, XRE family n=49 Tax=c... 69 8e-11 UniRef50_UPI000050FEC2 Helix-turn-helix family protein n=1 Tax=B... 69 9e-11 UniRef50_B2PVG1 Putative uncharacterized protein n=1 Tax=Provide... 69 9e-11 UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac... 69 9e-11 UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro... 69 9e-11 UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch... 69 1e-10 UniRef50_Q6MKI2 Putative DNA-binding protein n=1 Tax=Bdellovibri... 69 1e-10 UniRef50_B5XVI4 DNA-binding protein n=3 Tax=Enterobacteriaceae R... 68 1e-10 UniRef50_C5BLI6 DNA-binding protein n=1 Tax=Teredinibacter turne... 68 1e-10 UniRef50_Q1EMV7 Putative DNA binding regulatory protein n=1 Tax=... 68 2e-10 UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte... 68 2e-10 UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin... 67 2e-10 UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Pr... 67 3e-10 UniRef50_A6G914 Transcriptional regulator, XRE family with cupin... 67 3e-10 UniRef50_B2TDB5 Transcriptional regulator, XRE family n=5 Tax=Ba... 67 3e-10 UniRef50_A4FBL3 Transcriptional regulator, Cro/CI family n=2 Tax... 67 3e-10 UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh... 67 3e-10 UniRef50_A4FEP7 Transcriptional regulator, XRE family n=1 Tax=Sa... 67 3e-10 UniRef50_UPI0001C30F4B transcriptional regulator, XRE family n=1... 67 4e-10 UniRef50_A6BK54 Putative uncharacterized protein n=1 Tax=Dorea l... 66 4e-10 UniRef50_C6XRL5 Transcriptional regulator, XRE family n=1 Tax=Hi... 66 4e-10 UniRef50_Q39D54 Transcriptional regulator, XRE family n=59 Tax=P... 66 4e-10 UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Ch... 66 4e-10 UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rh... 66 5e-10 UniRef50_UPI0001B543C0 hypothetical protein SSPB78_17204 n=1 Tax... 66 6e-10 UniRef50_A3K855 Putative DNA-binding protein n=1 Tax=Sagittula s... 65 8e-10 UniRef50_B4SZY7 Transcriptional regulator, XRE family n=57 Tax=B... 65 1e-09 UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=... 65 1e-09 UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rh... 65 1e-09 UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzi... 65 1e-09 UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge... 65 1e-09 UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Op... 65 1e-09 UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax... 65 1e-09 UniRef50_A6TPN0 Cupin 2, conserved barrel domain protein n=1 Tax... 65 1e-09 UniRef50_C2ASM9 Predicted transcriptional regulator n=1 Tax=Tsuk... 64 2e-09 UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=De... 64 2e-09 UniRef50_B1MI43 Hypothetical transcriptional regulator n=1 Tax=M... 64 2e-09 UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n... 64 2e-09 UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin... 64 3e-09 UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein... 63 3e-09 UniRef50_C7Q8B8 Transcriptional regulator, XRE family n=4 Tax=Ac... 63 4e-09 UniRef50_Q1R147 Transcriptional regulator, XRE family with cupin... 63 4e-09 UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De... 63 5e-09 UniRef50_A1SCT4 Helix-turn-helix domain protein n=1 Tax=Nocardio... 63 5e-09 UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7... 63 5e-09 UniRef50_C5CXI9 Transcriptional regulator, XRE family n=1 Tax=Va... 62 7e-09 UniRef50_A8M338 Transcriptional regulator, XRE family n=1 Tax=Sa... 62 1e-08 UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be... 62 1e-08 UniRef50_UPI0001B560F6 putative transcriptional regulator n=1 Ta... 62 1e-08 UniRef50_Q2KW20 Putative transcriptional regulator n=1 Tax=Borde... 62 1e-08 UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=... 62 1e-08 UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum... 62 1e-08 UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin... 61 1e-08 UniRef50_B2JWV8 Transcriptional regulator, XRE family n=5 Tax=Ba... 61 1e-08 UniRef50_Q12QC4 Transcriptional regulator n=2 Tax=Alteromonadale... 61 2e-08 UniRef50_A6V6S7 Probable transcriptional regulator n=6 Tax=Pseud... 61 2e-08 UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q... 60 3e-08 UniRef50_A4AL40 Putative regulatory protein n=2 Tax=Actinobacter... 60 3e-08 UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De... 60 3e-08 UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill... 60 4e-08 UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al... 60 4e-08 UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burne... 60 4e-08 UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D... 60 5e-08 UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo... 59 5e-08 UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein... 59 6e-08 UniRef50_A9ANZ3 Transcriptional regulator, XRE family n=31 Tax=P... 59 6e-08 UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde... 59 6e-08 UniRef50_Q46QV6 Helix-turn-helix motif n=4 Tax=Proteobacteria Re... 59 6e-08 UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin... 59 7e-08 UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax... 59 7e-08 UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De... 59 8e-08 UniRef50_Q89VD2 Blr1115 protein n=1 Tax=Bradyrhizobium japonicum... 59 8e-08 UniRef50_A8GCS9 Transcriptional regulator, XRE family n=2 Tax=Ga... 59 9e-08 UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=De... 59 9e-08 UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy... 59 1e-07 UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost... 58 1e-07 UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh... 58 1e-07 UniRef50_B6VJL5 DNA binding regulatory protein n=2 Tax=Actinomyc... 58 1e-07 UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=... 58 1e-07 UniRef50_A7MK95 Putative uncharacterized protein n=1 Tax=Cronoba... 58 1e-07 UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco... 58 1e-07 UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea... 58 2e-07 UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein... 57 2e-07 UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro... 57 3e-07 UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin... 57 3e-07 UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh... 57 4e-07 UniRef50_B9JGZ9 Transcriptional regulator protein n=13 Tax=Prote... 57 4e-07 UniRef50_B7GVK0 Helix-turn-helix family protein n=11 Tax=Acineto... 57 4e-07 UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin... 56 4e-07 UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My... 56 4e-07 UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=F... 56 5e-07 UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin... 56 5e-07 UniRef50_D1SYA6 Transcriptional regulator, XRE family n=1 Tax=Ac... 56 5e-07 UniRef50_C6Q242 Transcriptional regulator, XRE family n=2 Tax=Cl... 56 5e-07 UniRef50_A8ZZ11 Helix-turn-helix domain protein n=1 Tax=Desulfoc... 56 5e-07 UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B... 56 6e-07 UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Pa... 56 7e-07 UniRef50_C9XPQ5 Putative transcriptional regulator (Putative unc... 56 7e-07 UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=... 55 7e-07 UniRef50_D1VIB7 Transcriptional regulator, XRE family n=1 Tax=Fr... 55 8e-07 UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B... 55 8e-07 UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax... 55 8e-07 UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI... 55 9e-07 UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B... 55 9e-07 UniRef50_A4FH89 HTH transcriptional regulator, XRE family, cupin... 55 9e-07 UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin... 55 9e-07 UniRef50_UPI0001C31978 transcriptional regulator, XRE family n=1... 55 1e-06 UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammapr... 55 1e-06 UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob... 55 1e-06 UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=De... 55 1e-06 UniRef50_A8FQX1 DNA-binding protein n=3 Tax=Alteromonadales RepI... 55 1e-06 UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=... 55 1e-06 UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax... 55 1e-06 UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Aci... 55 1e-06 UniRef50_C6D8D0 Transcriptional regulator, XRE family n=1 Tax=Pa... 55 1e-06 UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0... 55 1e-06 UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kl... 55 1e-06 UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu... 54 2e-06 UniRef50_Q6FBS7 Putative transcription regulator protein n=1 Tax... 54 2e-06 UniRef50_A1UVQ7 DNA-binding protein n=35 Tax=Burkholderia RepID=... 54 2e-06 UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=De... 54 2e-06 UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B... 54 2e-06 UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ... 54 2e-06 UniRef50_C7MI31 Predicted transcriptional regulator n=1 Tax=Brac... 54 2e-06 UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobac... 54 2e-06 UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enter... 54 2e-06 UniRef50_A8M439 Transcriptional regulator, XRE family n=2 Tax=Sa... 54 3e-06 UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re... 54 3e-06 UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=... 54 3e-06 UniRef50_A8MGA3 Transcriptional regulator, XRE family n=2 Tax=Cl... 54 3e-06 UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba... 54 3e-06 UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=R... 54 3e-06 UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rh... 53 3e-06 UniRef50_A8W2R9 Putative transcriptional regulator, XRE family n... 53 4e-06 UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci... 53 4e-06 UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepI... 53 4e-06 UniRef50_A3KBA7 Putative DNA-binding protein n=1 Tax=Sagittula s... 53 4e-06 >UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54 Tax=Enterobacteriaceae RepID=YDCN_ECOLI Length = 178 Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust. Identities = 178/178 (100%), Positives = 178/178 (100%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN Sbjct: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG Sbjct: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS Sbjct: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 >UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica RepID=B5FUU1_SALDC Length = 185 Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 129/177 (72%), Positives = 151/177 (85%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+NL +L+TTL+ LR QRGWSLSRLAE +GVSKAMLGQIERNESSPTVATLWKIATGLN Sbjct: 8 MDNLTHYLATTLRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 67 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 VPFS FISPPQ+ P +DPQQQAMVIT LFP+DP+LCF++FS+ +A G +SESTPH+ G Sbjct: 68 VPFSMFISPPQAEFPPTFDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVSESTPHKAG 127 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 VIEHVVVI G+LD+C G WQT++ G+G+RFA D H YRN +QTVHFHSLIHYPR Sbjct: 128 VIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHFHSLIHYPR 184 >UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulator ydcN n=2 Tax=Cronobacter RepID=C9Y503_CROTZ Length = 204 Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 105/174 (60%), Positives = 129/174 (74%), Gaps = 1/174 (0%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 ++ L+ TLK LRQQ+ WSL++ A+ TGVSKAMLGQIERNESSPTVATLWKIATG NVP Sbjct: 30 DITAHLAQTLKALRQQKNWSLTQAAQETGVSKAMLGQIERNESSPTVATLWKIATGFNVP 89 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 FS FI+PP +V+D QQ M++ LFP+D QL F+ ++ +A GA S+STPHE GV Sbjct: 90 FSVFITPPAPGARTVFD-AQQTMLVEPLFPWDEQLRFDMLAVTLAPGAQSDSTPHENGVT 148 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EHVVVI+G+L+L DG W+ L GEG++FA D H YRN V FHSLIHYP Sbjct: 149 EHVVVIEGELELQTDGVWRRLGPGEGLKFAGDRPHAYRNATPLPVRFHSLIHYP 202 >UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria RepID=A0KQ29_AERHH Length = 230 Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 96/187 (51%), Positives = 117/187 (62%), Gaps = 9/187 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + + L+ LK LR + GWSL A TGVSKAMLGQIER ESSPTVATLWKIATG Sbjct: 42 MQEMNQHLAQRLKGLRSELGWSLDVAARETGVSKAMLGQIERGESSPTVATLWKIATGFR 101 Query: 61 VPFSTFISP-PQSATPSVY--------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 V FS+FI P P +Y P + M + LFPY+ + FE F + + G Sbjct: 102 VSFSSFIEPTPAEQGEVLYRTADAIRQQPAGEGMQVAPLFPYEGRFGFELFELTLLPGYQ 161 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 ES PHE GV EHV+VI G +++ V+GEW++L GE VRFAAD H YRN G FH+ Sbjct: 162 RESEPHEPGVTEHVIVISGLMEVLVEGEWRSLTQGEAVRFAADRPHGYRNLGVAPAIFHN 221 Query: 172 LIHYPRS 178 LIHYP S Sbjct: 222 LIHYPVS 228 >UniRef50_A1JM20 Putative DNA-binding protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JM20_YERE8 Length = 153 Score = 159 bits (401), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 80/151 (52%), Positives = 99/151 (65%), Gaps = 8/151 (5%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSV--------YDPQQQAMVI 87 MLGQIER ESSPTVATLWKIA+GLNV FS F+ P + + ++ ++ + M + Sbjct: 1 MLGQIERGESSPTVATLWKIASGLNVSFSQFLETPPAQSAALHRHGLLTTFNSETSGMRV 60 Query: 88 TSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGE 147 LFPYD L + F I + G SESTPHE GVIEHV+VI+G+L L VDG +TL GE Sbjct: 61 VPLFPYDATLRMDMFVIDLEPGGCSESTPHEAGVIEHVIVIEGELILTVDGVTRTLTTGE 120 Query: 148 GVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +RFAAD H YRN +V FH LIHYP + Sbjct: 121 ALRFAADCPHGYRNESGHSVRFHDLIHYPHT 151 >UniRef50_Q2BZH4 Transcriptional regulator, HTH_3 family protein n=3 Tax=Vibrionaceae RepID=Q2BZH4_9GAMM Length = 183 Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 76/168 (45%), Positives = 103/168 (61%), Gaps = 2/168 (1%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 +S LK LR+++ SL ++ TGVSKAMLGQIER ESSPTVATLWKI++GLN F+ F Sbjct: 11 ISKHLKALREKQKLSLDATSKLTGVSKAMLGQIERKESSPTVATLWKISSGLNSSFTAFF 70 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 S ++ P M + +L YDP + FE F I + S+PH+ G IEH VV Sbjct: 71 SDQNDTDGRIF-PADIDMHVKTLITYDPTVRFEMFEITLTHFHTQHSSPHKTGTIEHSVV 129 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 +G+L + +D +W L+ GE +RF AD H YR E V FH+++ Y Sbjct: 130 TEGELGVYIDDKWHYLSKGESIRFEADKPHDYRAVTESVV-FHNIVSY 176 >UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium RepID=A6LSV7_CLOB8 Length = 184 Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/184 (41%), Positives = 109/184 (59%), Gaps = 7/184 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M NL + + LK++R +R SL A+ TGVSKAMLGQIER +S+PTV+TLWKI+TGL Sbjct: 1 MRNLNSIIGSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKISTGLK 60 Query: 61 VPFSTFISPPQSATPSV----YDP---QQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS FI Q V DP M + +FP+D FE F+I++ SG Sbjct: 61 VSFSFFIDEEQDELEIVDQNNIDPIIEDDARMKLYPIFPFDANRGFEIFTIELESGCNHV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 STPH GV E+++V G++++ +D + +L G ++F A++ H YRN + F ++I Sbjct: 121 STPHSDGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVSREKAIFQNII 180 Query: 174 HYPR 177 Y R Sbjct: 181 LYFR 184 >UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales RepID=Q1GDQ0_SILST Length = 187 Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 101/159 (63%), Gaps = 5/159 (3%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ L+++R G SLSR AE TGVSKAMLGQIER ESSPT+ATLWKIA G ++P + I Sbjct: 6 ITLNLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFHLPLTALI 65 Query: 68 ---SPPQSATPSVYDPQQ--QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 + P + VY + ++ + +FPYDP L E F + + G ES PH+ GV Sbjct: 66 EESTRPSGRSGEVYRTVEFPGSIAVKIVFPYDPSLGAETFHVSLKPGQSHESLPHDTGVT 125 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 E V V++G++++ DG+W L G+G+RF AD H YR+ Sbjct: 126 EEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRS 164 >UniRef50_Q484W4 DNA-binding protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484W4_COLP3 Length = 185 Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/174 (43%), Positives = 105/174 (60%), Gaps = 1/174 (0%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + + LK R +GWSL ++ T VSKAMLGQIER ESSPTVA LW IATG ++P Sbjct: 4 NFNNAIGSQLKLARTNKGWSLDIASKNTNVSKAMLGQIERGESSPTVARLWDIATGFHLP 63 Query: 63 FSTFISPPQSATPSVYDPQQQAMV-ITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 S F + S +A + I++LFP+D + E FS+ +AS S PH GV Sbjct: 64 LSYFFLAIEDDDVSKNMLNSEAGISISTLFPFDVETKSEVFSLTLASLHQQISAPHNDGV 123 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 IEH++VI+G ++ ++G+W L+ G+ V+F A+ H YRN E FH++I Y Sbjct: 124 IEHILVIEGDMEYLLNGQWHHLSKGDVVKFNANQKHGYRNVSEHQAVFHNIICY 177 >UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax=Vibrio RepID=A5F6U2_VIBC3 Length = 181 Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/171 (44%), Positives = 100/171 (58%), Gaps = 2/171 (1%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ LK LR+ RG SL A+ TGVSKAMLGQIER ESSPT+ATLWKIA+GL FS F Sbjct: 10 IANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFF 69 Query: 68 S-PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVV 126 + PQ + P M I +LFPY E F I + S+PH GVIE++ Sbjct: 70 ANDPQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIH 129 Query: 127 VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 V++G + + D +W L GE +RF +D H Y E+ V F +++ YPR Sbjct: 130 VLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPR 179 >UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WK19_9GAMM Length = 174 Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/175 (42%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N ++ LK+LR+ +GWSL+ AE TGVSKAMLGQIER ESSPT+ATLWK+ATG N Sbjct: 1 MQNNHHTVARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 V S ++ Q P +D + + + L +DPQ E + + MA GA S S H +G Sbjct: 61 VSLSWLLNDEQQ--PMTFDFAHERIQVERLLAFDPQTQQEVYKLCMAEGAQSHSDAHRRG 118 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + V G+LD+ V T+ GE RF A H Y N F ++I+Y Sbjct: 119 TFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSGKTEFLAVINY 173 >UniRef50_A6F756 DNA-binding protein n=1 Tax=Moritella sp. PE36 RepID=A6F756_9GAMM Length = 214 Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 105/195 (53%), Gaps = 19/195 (9%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ L + LK R +GWSL + ++ TGVSKAMLGQIER ESSPTV LW IA G +P Sbjct: 20 NIHTSLGSRLKTARSNKGWSLDKTSQHTGVSKAMLGQIERGESSPTVVKLWNIANGFELP 79 Query: 63 FSTFIS------PPQSATPSV------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA 110 S F++ SA S+ + + I +LFPYDP E F I + Sbjct: 80 LSYFLTDLAQTQAETSANTSLNTALNKLQNSEDDIHIVTLFPYDPLTKLEVFQITLDPQR 139 Query: 111 ISESTPHEKGVIEHVVVIDGQLD----LCVDG---EWQTLNCGEGVRFAADVTHIYRNGG 163 S PH GV+EH++ +DG ++ L DG +W L G+ ++F AD H YRN Sbjct: 140 EHISAPHNAGVVEHIIAVDGTMEYFLALTADGIAQQWHALKQGQSIKFNADQQHGYRNMT 199 Query: 164 EQTVHFHSLIHYPRS 178 E+ V H++I Y ++ Sbjct: 200 EKPVTIHNIISYTQT 214 >UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes RepID=C6Q1A6_9CLOT Length = 184 Score = 135 bits (339), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + L +R+Q+G SL ++AE TGVSK ML QIE+ S+PTV TLWKIATGLN Sbjct: 1 MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60 Query: 61 VPFSTFISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS F+ V + M++ LFPYD FE F+I++ G + Sbjct: 61 VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVYPLFPYDNTRRFEVFTIELEPGCNHK 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH +G E++VV G+++ + L+ G+ +R+ A+ H YRN + V F +I Sbjct: 121 SVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEIVIFQHII 180 Query: 174 HY 175 +Y Sbjct: 181 YY 182 >UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LQ1_BACLD Length = 183 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 9/184 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M ++ + ++ +K+LR+ R +SL +L+ TGVSK ML QIE+ SSPT+ TLWKIA GL Sbjct: 1 MNSIEKQVAENIKRLRKIRNYSLDQLSSMTGVSKGMLAQIEKGSSSPTITTLWKIANGLQ 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSL--------FPYDPQLCFEHFSIQMASGAIS 112 V F++ P + P+V ++ V+ FP+D + FE F I++A G + Sbjct: 61 VSFTSLAERP-AGEPTVVRKHEKTPVMAGEEKYAAFPHFPFDQKKKFEIFYIELAPGCVH 119 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ES PH G+ E+V+V G L + LN G+ + F A+ H Y+N EQT ++L Sbjct: 120 ESEPHHGGIEEYVLVSKGALAVTAGDYTCDLNEGDAMHFTANTVHTYKNNTEQTASCYTL 179 Query: 173 IHYP 176 I+YP Sbjct: 180 IYYP 183 >UniRef50_B1HN87 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HN87_LYSSC Length = 183 Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME ++R L+ LK++RQQR SL +A+ATGVSKA L QIE+ E++PTV+T+WKIA G+ Sbjct: 1 MEQMSRNLAFQLKKIRQQRHLSLDDVAKATGVSKAQLAQIEKGEANPTVSTIWKIAAGMR 60 Query: 61 VPFSTFISPPQS--------ATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + FS+ + PP + P V D + + S+ PY+P+ +E + ++M GA+S Sbjct: 61 ISFSSLLQPPTAHFMRYSSKDVPHV-DEDEGRYRVYSIIPYNPERGWEFYKVEMEPGAVS 119 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S H +GV E V++I GQ + + L+ G+ + F+ H YRN E FH + Sbjct: 120 RSEAHTEGVEETVMIIKGQAAISAGDMHELLDEGDTLVFSGHQPHEYRNTSEGLTIFHLI 179 Query: 173 IHY 175 + Y Sbjct: 180 LQY 182 >UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium RepID=Q18AY1_CLOD6 Length = 183 Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 105/181 (58%), Gaps = 11/181 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N + L+ LRQ+ G SL + ++ TGVSKAMLGQIER ESSPTV+TLWKI++G Sbjct: 1 MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFK 60 Query: 61 VPFSTFIS---------PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + F+T ++ + P V Q+ M + ++P+ PQ FE F I++ Sbjct: 61 INFTTLLNENTNTYEVIKKEEVEPIV--EQKGNMKLYPIYPFSPQRRFELFIIELEENCT 118 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S+ H + E+V+VI+G+LDL VDG+ L G +RF + HIY+N + FH+ Sbjct: 119 HVSSTHSHVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKTIFHN 178 Query: 172 L 172 + Sbjct: 179 I 179 >UniRef50_B4RY23 Transcriptional regulator, HTH_3 family protein n=2 Tax=Alteromonas macleodii RepID=B4RY23_ALTMD Length = 208 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/177 (41%), Positives = 106/177 (59%), Gaps = 5/177 (2%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 +++ ++ L+ +R RG SL + A+ TGVSKAMLGQIER ESSPT+ATLWKIATGL F Sbjct: 32 ISKSIAQHLQSVRTGRGLSLDKTAKLTGVSKAMLGQIERGESSPTIATLWKIATGLACSF 91 Query: 64 STFISPPQSATPSVYDPQQQA----MVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 S+F+S ++A S + + A + I +LFP++ FE F + + S+ H+ Sbjct: 92 SSFLSGDETAPTSQHADDKFANDPNVTIKTLFPFNAVTQFEMFELCLKDFHEQHSSAHQI 151 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 GV EH+ V+ G+L + DG+WQ E AD H YR+ +T F +IHYP Sbjct: 152 GVTEHIHVLQGKLGVLQDGQWQAYQAQEQCILHADQPHGYRDEVGET-RFVVVIHYP 207 >UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDG4_BREBN Length = 185 Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + +K++R++R SL + +E TGVSK MLGQIER +S+PT+ TLWKIA+GL Sbjct: 1 MEEFHTNIGENIKRIRKERNLSLDKTSEITGVSKTMLGQIERGKSAPTITTLWKIASGLR 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 + FS+ IS + V + ++ + L PY+P+ FE FS+ + G Sbjct: 61 LSFSSLISQYKPNVTIVKKKEVNPIIENDGQYRVYPLVPYNPEQQFEIFSVTLEPGCEHI 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH GV E ++V +G L++ V+ + + + + F AD HIY+N G++ V +I Sbjct: 121 AEPHTTGVEEFILVNEGTLEVVVNEQIYVVEPEDTLIFKADRPHIYQNNGDRIVKCSVII 180 Query: 174 HY 175 HY Sbjct: 181 HY 182 >UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD Length = 189 Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 103/181 (56%), Gaps = 7/181 (3%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L++ + LK++R RG +L +LA+ TGVSK MLGQIER ES+PTV+TLWKIATGL+V Sbjct: 4 EMLSKRIGQRLKRIRSDRGMTLDQLAKKTGVSKPMLGQIERGESNPTVSTLWKIATGLHV 63 Query: 62 PFSTFISPPQSATPSVYDPQQQAMV------ITSLFPYDPQLCFEHFSIQMASGAISEST 115 F+ FI + + Q ++ + LFP FE FS+++ +G S Sbjct: 64 SFTAFIEDEKPNVTVIKRDQVLPIIDGCDFQVFPLFPRSKDKPFEIFSVKLEAGTDHTSE 123 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNG-GEQTVHFHSLIH 174 H +GV E V+V G L++ + E L G+G+ F AD H Y NG + F ++I Sbjct: 124 GHAQGVHEFVIVEKGTLNVKIGDEVYVLERGDGIHFPADQVHHYINGSSSEACVFTNIIS 183 Query: 175 Y 175 Y Sbjct: 184 Y 184 >UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR34_RHORT Length = 248 Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/184 (38%), Positives = 109/184 (59%), Gaps = 12/184 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+L + L++LR RG SL RLA+ +GVS+AMLGQIE S+PT+ LWKIA L+V Sbjct: 62 EDLMPVVGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALDV 121 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAIS 112 PFS F++ P + + +V + +A +TS LFP+D E + + ++ +I+ Sbjct: 122 PFSAFVAAP-ALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIA 180 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN-GGEQTVHFHS 171 +S PH G +E + V G L++ L+ G+ ++F AD+ H YRN GG+ TV F+ Sbjct: 181 QSHPHPAGTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNPGGDDTV-FYL 239 Query: 172 LIHY 175 ++ Y Sbjct: 240 VMTY 243 >UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA45 Length = 189 Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 104/182 (57%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + + + L+ +R+ RG SL +AE TGVSKAMLGQIER +S+PT++ LW+I +GL Sbjct: 1 MEPIHKKVGRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLG 60 Query: 61 VPFSTFISPPQS----ATPSVYDP---QQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F+T I ++ +P +P + A + LF Y+ + FE + + M G Sbjct: 61 ISFTTLIEEAETEVTVVSPDDVEPFHEAEGAYRVYPLFSYNLRTKFESYMVIMDPGCDHG 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H GV E++ V G+L+L + E T+ G V F+A+ H Y N G +T F+++I Sbjct: 121 SEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVNPGNETTKFYTII 180 Query: 174 HY 175 Y Sbjct: 181 FY 182 >UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH Length = 204 Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 7/185 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + L+ LK +R++ SL ++++ TGVSK M+GQIER ESSPT+ T+WKIA GL Sbjct: 20 MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISE 113 V F++ I+ PQ T + Q + S FP+ FE +++++ + Sbjct: 80 VSFTSLINNPQPDTKVILRNDIQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAEGKLS 139 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H++G E + V +G+L + ++ LN G+ +RF AD H Y N G I Sbjct: 140 SEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRLSMTI 199 Query: 174 HYPRS 178 +Y S Sbjct: 200 YYSAS 204 >UniRef50_A4C3V5 DNA-binding protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C3V5_9GAMM Length = 154 Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/151 (45%), Positives = 85/151 (56%), Gaps = 8/151 (5%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFI-SPPQSATPSVYDP-------QQQAMVI 87 MLGQIER ESSPTVATLWKIATG +P S F+ +P Q + V D + I Sbjct: 1 MLGQIERGESSPTVATLWKIATGFTLPLSYFLLTPGQDSGVEVPDDAAFQIQRNLNDLQI 60 Query: 88 TSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGE 147 +L P+D FE F I + G S PH GVIEH+VVI G ++ ++ W L G+ Sbjct: 61 KTLLPFDSITRFELFQIVINPGYSHLSLPHNHGVIEHIVVISGAIEYLLNDNWLRLTAGQ 120 Query: 148 GVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +F AD H YRN +QT FH+LI Y S Sbjct: 121 VAKFCADQPHGYRNVTQQTAVFHNLIFYGES 151 >UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R4_STAS1 Length = 181 Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N+ ++ + R++ SL ++A ATGVSK ML QIE+ +S+PT+ TLWKIA GL+ Sbjct: 1 MYNIQSIVAKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLH 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-----QQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + S S + + + + I FPYD FE F +++ G S Sbjct: 61 ISLSQLTSTSNDTIDFIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKMHSD 120 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 PH G E+++V DG L++ VDG+ T+N + RF +D+ H Y N G V S ++Y Sbjct: 121 PHHPGSEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVALTSTMYY 180 >UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=Myxococcales RepID=B8JEE6_ANAD2 Length = 260 Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 105/178 (58%), Gaps = 11/178 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++L + T L++LR QR SL +L++ +GVS+AMLGQIE +S+PT+ LWKI++ L+V Sbjct: 74 KDLTPVVGTNLRRLRTQRDLSLEKLSKLSGVSRAMLGQIELGQSAPTINVLWKISSALSV 133 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAIS 112 PFS I+ + V + A V++S LFP+D E + ++MA G++ Sbjct: 134 PFSALITARSTGGLHVLR-AEHAKVLSSHDGSYSSRALFPFDEPRRVEFYELRMAPGSVE 192 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE-QTVHF 169 + H G IE++VV G +++ V G + L G+ + F AD H+YR+ + +TV + Sbjct: 193 RADAHNPGTIENLVVAAGAVEIEVPGRKEQLGTGDAIVFQADAPHVYRSRADVETVMY 250 >UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C6PVT7_9CLOT Length = 182 Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 7/175 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + LK++R +R +L + TGVSKAMLGQIER ES+PT++ LWKI+TGL + FS + Sbjct: 8 IGSVLKRVRFERELTLEETSNLTGVSKAMLGQIERGESNPTISILWKISTGLRISFSELL 67 Query: 68 SPPQSATPSV----YDPQQQA---MVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 +V +P ++ M++ +FP++P FE+F I++ GA STPH+ Sbjct: 68 GSENDDYKAVSIDDIEPVYESDGKMILYDVFPFNPLSGFEYFYIKLLPGAHHVSTPHQSS 127 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 V E++VV G L L + + L +RF + +H Y N ++ V F ++I Y Sbjct: 128 VEEYIVVTKGTLKLTLGEQTFELTSPAALRFKPNKSHTYSNPYDEEVIFQNVIKY 182 >UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID=C4IIY7_CLOBU Length = 183 Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 11/184 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + R +S LK +R+ + SL ++E TGVSK+MLGQIER ES+PTVA L KI +GL Sbjct: 1 MDYINRNVSINLKNIRKSKKMSLDVVSEQTGVSKSMLGQIERGESNPTVAILGKIVSGLR 60 Query: 61 VPFSTFISPP---------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 V F+ + P +S PS Q + + + FPY+ FE + I++ G + Sbjct: 61 VSFNDLVCMPKEEIYIVKKESLEPSKESTDQYS--VYTYFPYEEDRNFEIYMIEIKPGGV 118 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + H + E++ VI G+L L +D + + G+ VRF D H+Y N + + F++ Sbjct: 119 YTTGSHGEKTCEYINVIKGELTLEIDEKKYVIKSGDAVRFNTDKDHVYINDTNELLSFNA 178 Query: 172 LIHY 175 + ++ Sbjct: 179 VFYW 182 >UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=B3QIN2_RHOPT Length = 207 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 102/178 (57%), Gaps = 12/178 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L++LR ++G+SL RLA+ +GVS+AMLGQIE +S PT+ TLWK+AT L VP Sbjct: 21 DLPSIVGHNLRRLRVRQGYSLERLAKQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVP 80 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAISE 113 F+ I+ P V + A ++TS LFP+D + E + +++A + Sbjct: 81 FARLIATETPHHPQVLR-RTDAKLLTSNQGQFTSRALFPFDGERQVEFYELRLAPLHRED 139 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQT-LNCGEGVRFAADVTHIYRN-GGEQTVHF 169 + PH G E++VV G +++ E L+ G+ + F ADV H YRN G E+ V F Sbjct: 140 ADPHAAGTRENLVVAKGAVEITAGAERPVVLSAGDAILFDADVPHSYRNLGAEEAVLF 197 >UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B0MBC4_9FIRM Length = 180 Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 7/176 (3%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ +K+LR+++ S+ L++ +GVSK+ML QIER + +PT++TLWKI+ G+ VPF Sbjct: 5 VAKNIKRLREKQKLSMEALSKLSGVSKSMLAQIERGDGNPTISTLWKISNGMKVPFDALT 64 Query: 68 SPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 P++ + + ++ S LFP D F + +++ + ES H KG Sbjct: 65 VRPKTPYEIIKTADIEPLLEDSGRVKNYPLFPDDADRKFAVYYLKLEPYSRWESEAHLKG 124 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E + V G L++C D TL E +RF D H YRN G TV + ++ YP Sbjct: 125 TTEFITVFHGDLEICADCHKFTLTKDESIRFPGDTAHSYRNTGNDTVVLYMILFYP 180 >UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C7IC10_9CLOT Length = 184 Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+NL+ +S LK++R+++ SL +A+ +GVSK+MLGQIER E +PTV+T+WKIA GL Sbjct: 1 MDNLSNIISENLKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLK 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS ++ ++ V + ++ I F +D FE +S++ + Sbjct: 61 VSFSQLVNHTETNVEIVDIKNLKPLLEDEGRVRIYPTFSFDSTRRFEIYSLEFQTNGYLS 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH +GV E + V G+L + V + ++ G+ +RF AD H Y+N G +I Sbjct: 121 TEPHLQGVQEFLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANCLLDMVI 180 Query: 174 HYP 176 YP Sbjct: 181 FYP 183 >UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0X7_HALOH Length = 182 Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L++LR +G+SL L E GVSK+MLGQIER +++PTV TLWK+A LN Sbjct: 1 MNEINANIGKKLRKLRIGKGYSLGDLEEIAGVSKSMLGQIERGKTNPTVKTLWKVARSLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGAIS 112 VPFS FI S V+ P ++ +V + L P + FE + +++ G Sbjct: 61 VPFSFFIEEETSPV-KVFSPSKEVLVSGKKGRYRVYPLMPLNRTKNFEIYLMEIEPGYSY 119 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 +S PH +GV E V+V +G L L V+ + E + F D HIY N E + + L Sbjct: 120 KSEPHSQGVEEFVMVKEGILRLTVNSKEYKAREEEIIHFPGDRVHIYHNISETPLKAYVL 179 Query: 173 IHY 175 + Y Sbjct: 180 VCY 182 >UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus RepID=A9A888_METM6 Length = 209 Score = 115 bits (287), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 102/185 (55%), Gaps = 9/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 MEN + +S LK++R + G SL +++ TGVSK MLGQIER E +PT++T+ KIA GL Sbjct: 26 MENPSHVISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLK 85 Query: 61 VPFSTFISPPQSATPSV--------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + F++ +S ++ +V YD ++ +F ++ FE ++ G + Sbjct: 86 ISFTSLLSEKEADVKTVELNNVSPIYDDSKKWR-FYPVFNFEDSRPFEISYVEADPGVVM 144 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S H K E V V +G+L L ++ + T++ G +RF A+V H Y N + H + Sbjct: 145 SSDGHIKNSEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVIHMM 204 Query: 173 IHYPR 177 ++YP+ Sbjct: 205 LYYPK 209 >UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N143_CLOK5 Length = 184 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 102/181 (56%), Gaps = 6/181 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME++ + LK +R++R +L L++ T VS +MLG+IER ++PT+ LWKIA GL Sbjct: 1 MEDIKSIIGINLKNIRKKRQLTLEMLSKLTNVSISMLGEIERGITNPTITVLWKIADGLK 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV------ITSLFPYDPQLCFEHFSIQMASGAISES 114 +PF+ I+ + VY+ + ++ + SLF +DP E + + G+ ES Sbjct: 61 IPFTDLINEEKPPISVVYNSDAKTIINESGFKLFSLFNFDPIKKIELYYKILEVGSSYES 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H G+ E++++ +G ++L + + L+ G+ + F ++ H Y+N GE + + L++ Sbjct: 121 KGHTVGIEEYIMICNGIMNLQIGDKNYILSKGDSINFKGNIYHRYKNEGELPLRAYMLLY 180 Query: 175 Y 175 Y Sbjct: 181 Y 181 >UniRef50_Q49XM3 Predicted transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q49XM3_STAS1 Length = 182 Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + ++ LK R+Q G+SL L+ T VSK MLGQIER ES P++ TLWKIA GL Sbjct: 1 MKEINDIIAENLKLYRKQNGYSLEHLSYLTEVSKTMLGQIERKESIPSITTLWKIANGLK 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 V F+ + Q + I F +D + FE + + + G Sbjct: 61 VSFTELTQENDEIIRKITLNDIQPLASEDNKYQIYPYFKFDIEKKFESYMVLIEPGGTMS 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 PH G +E++ V DG L L + E + E ++F A++ H Y N + T+ + +I Sbjct: 121 GEPHGSGTMEYITVFDGTLTLILADEQFIIKENESIKFNANMFHNYANNHDTTIRINMVI 180 Query: 174 HY 175 HY Sbjct: 181 HY 182 >UniRef50_C0C4F2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0C4F2_9CLOT Length = 183 Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 104/183 (56%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + ++ +++LR++ S+ L++ + VSK+ML QIER E++PT++TLWKI+ G+ Sbjct: 1 MDPMNMIVAKNIRRLREENKLSMEELSKLSSVSKSMLAQIERGEANPTISTLWKISNGMK 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISE 113 VPF P+++ V + Q ++ +FP D F + +++ G+ E Sbjct: 61 VPFDHLTVRPKTSYEIVNTSEIQPLLEDGGRVKNYPVFPDDENRRFAVYYLELDKGSYWE 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH KG E + + G +++ G+ T+ GE +RF AD TH Y+N G++T H +I Sbjct: 121 SEPHLKGTTEFITIFAGCVEISAGGQQFTVGRGESIRFRADSTHSYKNTGDETAILHMII 180 Query: 174 HYP 176 + P Sbjct: 181 YNP 183 >UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM Length = 183 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 94/181 (51%), Gaps = 7/181 (3%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ ++ LK LR +R SL +LAE + +SK ML QIE+++++PT+ TLWKIA GL VP Sbjct: 2 NINSIIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLKVP 61 Query: 63 FSTFISPPQSAT----PSVYDPQQQAMVITSLFPY---DPQLCFEHFSIQMASGAISEST 115 ++ + + T S +PQ + Y P FE F I++ G S Sbjct: 62 YTLLLEQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRNFELFQIELDEGCSYRSV 121 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H K E+++V++G+L L V+ E LN + + F+ HIY N G T+ Y Sbjct: 122 GHSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLKATITNFY 181 Query: 176 P 176 P Sbjct: 182 P 182 >UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira RepID=B0SF19_LEPBA Length = 207 Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 8/173 (4%) Query: 11 TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP 70 LK +R +G+SL +LA GVS+AML QIE+ +S PT++ LWKIA GLNVPFS + Sbjct: 30 NLKLIRHTKGFSLDKLANRCGVSRAMLSQIEQGKSVPTISVLWKIANGLNVPFSELLKEK 89 Query: 71 --------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 ++ V + +LFP+ E + + + G + PH+ G Sbjct: 90 NQDGIHILKAENSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEVAEPHKTGTT 149 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E++VV+ G+L L V + L + V F ADV+H Y N +Q + ++ Y Sbjct: 150 ENLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVMDY 202 >UniRef50_D2JL57 DNA-binding protein, putative n=1 Tax=Staphylococcus aureus RepID=D2JL57_STAAU Length = 182 Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 95/171 (55%), Gaps = 8/171 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + ++T L+++R Q+ SL L++ T VSKA+L QIE+ ++PT++TLWKIA GLN Sbjct: 1 MEYINEIIATNLRKIRNQKRMSLDDLSKLTSVSKAVLFQIEKGTTNPTISTLWKIAEGLN 60 Query: 61 VPFSTFISPPQSATPSVYD---PQQQAMVITSLFPYDPQLCF---EHFSIQMASGAISES 114 +P S I +SAT D P ++ + P C+ E F I + + ES Sbjct: 61 IPLSNIIHKRKSATIVRKDETIPLNDNSNNVKIYSHIP--CYRNLEIFDIVLNKDGVLES 118 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + H+ G E V + G++ + ++ E L E +RF ++V+H Y N G + Sbjct: 119 SGHDIGAEELVFIKVGKVKVTIENEEFILTENEILRFDSNVSHSYENIGSE 169 >UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=Q3SUW3_NITWN Length = 259 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 9/178 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L+++R ++G SL RLA+ +GVS+AMLGQIE +S+PT+ LWKI T L VPF++ Sbjct: 77 IVGKNLRRIRLRQGLSLERLAKQSGVSRAMLGQIETGKSTPTIGLLWKICTSLTVPFASL 136 Query: 67 IS--PPQSAT------PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 I+ P+ + Q +LFP+D + E + +++A + H Sbjct: 137 IAVGDPEGIIVLRRDGSKLLSSNQGRFTSRALFPFDSERRTEFYELRLAPLYCENAEAHA 196 Query: 119 KGVIEHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G E++VV G +++ V TL+ G+ + F ADV H YRN G + ++ Y Sbjct: 197 AGTRENLVVAKGSVEIAVGSARPTTLSEGDAMLFEADVPHAYRNLGTDEAVLYLVMTY 254 >UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TWB6_FUSNP Length = 182 Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 10/182 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L +S +K++RQ++ SL LA+ + VSK+ML QIER E +PT++TLWKIA G+ Sbjct: 1 MDRLNILVSENIKRIRQEKNLSLGDLAKLSDVSKSMLAQIERGEGNPTLSTLWKIANGMQ 60 Query: 61 VPFSTFISPPQ--------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 V F+T I+ P+ + + D + SLF D + F + I++ Sbjct: 61 VSFNTLIAQPKLPYKVTKLAEIEPILD-MNGGLKNYSLFS-DIENNFSVYQIEVGKEISW 118 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S H G E V+VI G L++ ++ + L GE + F AD+ H Y N E T FH++ Sbjct: 119 ISEAHLSGTAEFVIVIQGTLEIKLEEKTFILKKGENLWFKADIPHGYCNLDEGTTIFHNI 178 Query: 173 IH 174 ++ Sbjct: 179 LY 180 >UniRef50_C4Z9Q8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z9Q8_EUBR3 Length = 189 Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 7/172 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L+ +S LK++RQ +G SL ++AE TGVSK+ML QIE+ ++P++ L KI +GL Sbjct: 3 MDYLSHNVSENLKRIRQSKGMSLDQVAEQTGVSKSMLAQIEKGTANPSIGVLGKITSGLR 62 Query: 61 VPFSTFISPPQS----ATPSVYDPQQQAM---VITSLFPYDPQLCFEHFSIQMASGAISE 113 + F I PP+ +P P ++ + + + FPY+ E + I + G + Sbjct: 63 IEFQRLIDPPRVDYALISPDDLVPTKELLGQYRVWTCFPYEDSREVEVYRIDVEPGGVYT 122 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 S H + E++ V DG L + Q ++ G+ +F D H+YRN G++ Sbjct: 123 SGGHGEKTREYLTVTDGVLTVECHDHVQEIHRGQVYKFETDQPHLYRNDGDR 174 >UniRef50_UPI00005895B5 truncated transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=UPI00005895B5 Length = 161 Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 90/162 (55%), Gaps = 11/162 (6%) Query: 23 LSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQ 82 + +L++ TGVS + L +IE+ + P++ T+WKI+ GL + FS+ +S +S V ++ Sbjct: 1 MEKLSKLTGVSTSSLNEIEKGNTIPSINTVWKISNGLKLSFSSLMSEAESDYVQV--NKE 58 Query: 83 QAMVITS---------LFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLD 133 + +T FP++ FE F +++ GA +S PH G E ++++DGQL+ Sbjct: 59 DVVPVTEDDGKYRVYPYFPFEKSKSFEFFYVELDPGATLDSEPHLSGSEESIIIVDGQLE 118 Query: 134 LCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + ++ E L G+ +RF +D+TH Y N GE +I Y Sbjct: 119 MHLENEVIDLGKGDALRFKSDITHSYTNHGEDMTLISMVIDY 160 >UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Burkholderiales RepID=B2UK31_RALPJ Length = 198 Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/180 (34%), Positives = 90/180 (50%), Gaps = 12/180 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LRQ R SL L+ GVSK+ML Q+ERN ++PTVA LW++AT L V + F+ Sbjct: 17 VGAKLQALRQARKLSLDELSRHAGVSKSMLSQVERNLANPTVAVLWRLATALGVSLADFL 76 Query: 68 SPPQS--ATPSV-YDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAISEST 115 SP + A P+V P VI S L P D FE + + + G + S Sbjct: 77 SPESAADAAPAVTVIPAHSIPVIKSPDGKCELKILGPVDLAARFEWYELAIQPGGMLASE 136 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 PHE G EH+ V++G + + + + GE R+ DV H N G+ ++ Y Sbjct: 137 PHELGAKEHLSVLNGTVTVQSGPSEKKVRHGETARYPVDVQHAISNAGKTVATALLVVEY 196 >UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Burkholderiales RepID=Q1LDV8_RALME Length = 203 Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 16/183 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + L+ LRQ + SL L+ GVSK+ML QIERN ++PTVA LW++A L V + F+ Sbjct: 21 VGSALQALRQSQQLSLDELSRRAGVSKSMLSQIERNLANPTVAVLWRLANALGVSLTDFL 80 Query: 68 S--------------PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + PP ATP++ P + + L P D FE + + + G + Sbjct: 81 AQGTAAPQAPAITVVPPH-ATPALKSPDTRCE-LRILGPIDMAGRFEWYELSIQPGGVLA 138 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PHE G EH+ V+ G + + G+ + L G+ R+ ADV H N G+ ++ Sbjct: 139 SEPHEAGTQEHLSVLTGSMTVRSGGDEKKLKHGDTARYGADVAHAIGNPGKSVATALLVV 198 Query: 174 HYP 176 +P Sbjct: 199 VHP 201 >UniRef50_B7IJ03 DNA-binding protein n=74 Tax=Bacillus RepID=B7IJ03_BACC2 Length = 190 Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 5/169 (2%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF--ISP 69 L+Q+R ++ SL LA TGVSK LG+IER E++PT+A +WKI GL++P S + Sbjct: 20 LRQIRNEQKLSLEELAHKTGVSKLTLGKIERGETNPTLAVIWKITKGLSIPLSRLMVVGE 79 Query: 70 PQSAT---PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVV 126 P + + QA + ++F Y + E + S +I E H +G IE V Sbjct: 80 PVAVARCGEGFAVDEGQAWHLETMFRYTKETGMEMHRACLRSNSIYEPEAHHEGAIELVT 139 Query: 127 VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 ++ G++ + V+ + LN + ++F A+ H+Y+N E+ H + Y Sbjct: 140 IMKGKVSIQVENDVYELNEFDSIQFEANKKHVYKNEEEEVAVLHLTMKY 188 >UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X8B7_ENTFA Length = 183 Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 8/169 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + LK++RQ++ +L LA TGVSK ML QIE+ ++PT+ T+WKI+ GLNVP++ Sbjct: 6 IIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLNVPYTYL 65 Query: 67 I-------SPPQSATPSVYD-PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 + +P T +V + + + + + + + FE F ++ SG ++ H Sbjct: 66 LEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFELDSGKKYQAVGHS 125 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 K IE+V+VI G L L V + L + F A+ H Y N G + V Sbjct: 126 KRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQV 174 >UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUL8_9FIRM Length = 186 Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ + +++LR+ + +L A ATGVS++ML QIE+ + +PT++ LWKIA G V Sbjct: 4 NINLEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGYKVS 63 Query: 63 FSTFISPPQ---------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 F++ + TP + D + +F +D + FE + I + G + Sbjct: 64 FTSLVETGMEDAAVIRAGDITPIMEDGGN--YMNYPVFAFDDRKLFETYRIVIKPGGCLK 121 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH G E++ + GQ + G+ L G+ +RF AD H YRN G +I Sbjct: 122 ARPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTGNAEMSMVI 181 Query: 174 HYPR 177 Y R Sbjct: 182 FYGR 185 >UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCS3_BACSK Length = 193 Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 4/172 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+QLR +G S+ LA+ GVSK L +IE+ E +PT++ +WKIA GL++P + + Sbjct: 19 IGKNLRQLRTSKGMSIEALAQQIGVSKLTLLKIEQGEGNPTLSVIWKIANGLHIPITALL 78 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDP----QLCFEHFSIQMASGAISESTPHEKGVIE 123 S + + + F +P Q E + + ES H GV+E Sbjct: 79 SFEADVAIARANKAMKLSSSDDEFIVEPLFRSQGLMECYRGYLQPQCRYESEAHRLGVVE 138 Query: 124 HVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 V V+ GQL + V+GE L+ + + F D H Y N G++T H LI Y Sbjct: 139 TVTVMAGQLTIEVEGESHHLSAYDSIHFKGDRPHAYINLGKETAVLHFLISY 190 >UniRef50_UPI0001C36321 DNA-binding protein, putative n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36321 Length = 162 Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 9/151 (5%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITS------ 89 MLGQIER +SSPT+ TLWKIATGL +P S + QS+ ++ ++Q +++ Sbjct: 11 MLGQIERGQSSPTINTLWKIATGLKIPLSLLLE-EQSSEYTIAAAEEQNVILEDNGRMKA 69 Query: 90 --LFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGE 147 +F YDP E F I S H GV E V V+ G L L ++G+ + + Sbjct: 70 YPIFAYDPIRSVESFYITFEPDCKHTSDKHNDGVEEQVFVLHGSLQLVLNGKTIIVTENQ 129 Query: 148 GVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +RF AD+ H Y N + + +I Y ++ Sbjct: 130 AIRFHADIPHEYNNPFADSCTVYDMIFYSKN 160 >UniRef50_B8EMC1 Transcriptional regulator, XRE family n=1 Tax=Methylocella silvestris BL2 RepID=B8EMC1_METSB Length = 206 Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 9/177 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 +S L+ L Q++G S+ LA A+G+++ L + E++PT+ +WKIA L VPF + + Sbjct: 24 ISERLRLLMQRKGRSIEALAAASGLARNKLDAVAAGEAAPTINLVWKIANALGVPFGSLV 83 Query: 68 SPPQ--------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 + + AT VY + L P+D + E + + +A ++ S H Sbjct: 84 AARKRGGNIVLRKATEKVYFSNDGRLTSRPLLPHDCKRLVEFYEMTIAPDYVARSEAHGA 143 Query: 120 GVIEHVVVIDGQLDLCVDGEW-QTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G +E +VV+ G++ + V E Q L G+ + F ADV H Y N G + ++ Y Sbjct: 144 GTLESLVVVRGEVAIVVGKEASQRLKEGDAMTFEADVPHSYHNLGSTEALLYLVMSY 200 >UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseudomonas RepID=Q880R5_PSESM Length = 212 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 12/179 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ L++LR +R S+ LA TGVS+AML QIE S P++ L KIA GL V + F+ Sbjct: 32 VARNLQRLRSKRYLSMDALARLTGVSRAMLAQIESGRSVPSIKVLCKIAKGLKVSIAAFL 91 Query: 68 SPPQSATPSVYDPQQQAMVIT--------SLFPYDPQLCFEHFSIQMASGAISE--STPH 117 + Q +++ +LFP+D E + I++ GA+ E S H Sbjct: 92 EDRAFEGVELLPAQHSKRLVSASGVFVSRALFPFDMARQSEFYEIRL--GALGEEISNGH 149 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 GV E++VV G L++ V+ E L+ G+ + F AD H YRN + ++ YP Sbjct: 150 GPGVQENLVVAQGVLEVSVNEERYLLSTGDSILFYADQPHRYRNPADSEALAFLVMTYP 208 >UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHK0_EUBSP Length = 184 Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 11/185 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME L + ++ LK++R+ +G SL + + T +SK+ML Q+ER E +PT++T++K++ GL Sbjct: 1 MERLNQIIAENLKEIRKGKGLSLEQASALTSISKSMLSQLERGEVNPTISTVYKLSLGLK 60 Query: 61 VPFSTF-ISPPQ--------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 VP + F + P+ P D + + +F + FE F ++ G + Sbjct: 61 VPVTAFTLDKPKPFSKTGKSEVVPLSGDDGRYRLY--PIFNFRDGQDFEIFDLEFDEGGM 118 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 G E + V GQL L L GE + A +IY+N G V Sbjct: 119 MPGNRQMNGTREFITVYSGQLTLSFQDREYVLEAGEAASYNAFDDYIYKNTGTGMVTASI 178 Query: 172 LIHYP 176 ++HYP Sbjct: 179 VVHYP 183 >UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2L3_9CLOT Length = 215 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E+L + ++ LK++R+ + SL + + T +SK+ML Q+ER E +PT++T++K++ GL Sbjct: 32 LEDLNQLIADNLKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLK 91 Query: 61 VPFSTFISP---PQSAT------PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 VP + F +P P S T P V D + + +F + FE F + G Sbjct: 92 VPVTAFTAPKPTPFSQTSKAEVSPLVSDDGRYRLY--PVFSFRDGQDFEIFDFEFDEGGQ 149 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 G E + V GQL L L G+ + A +IY+N G+ + Sbjct: 150 MAGNRQMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACI 209 Query: 172 LIHYP 176 ++HYP Sbjct: 210 VVHYP 214 >UniRef50_C8WYG8 Transcriptional regulator, XRE family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYG8_ALIAD Length = 201 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 8/168 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ + +S L+ LR RGWS+S L +GV+K + Q+E +PTVATLW +A+ L+VP Sbjct: 14 NIMKIVSNNLRALRLARGWSISELERRSGVAKGTISQLESGYGNPTVATLWSLASALSVP 73 Query: 63 FSTFISPPQSA-----TPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 FS I + +P + +P + + + E + + ++ S H Sbjct: 74 FSDLIQTAKETESVHESPVLAEPSGTTRFVDRV---TMEGMIEIYEMVLSKDDERVSEAH 130 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 G++EH++V+ G++++ G+ LN G F V H+YR+ E+ Sbjct: 131 PLGIMEHILVVQGRMEVGPIGQEIALNPGSYTTFPGYVRHVYRSLDEE 178 >UniRef50_C5RJ85 Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ85_CLOCL Length = 182 Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 6/174 (3%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS--T 65 +S +K++RQ+R +L LA TGVSK+ML +IER SPT++ L KI G+NVP + T Sbjct: 8 ISRNIKRIRQERNLTLDDLAILTGVSKSMLSEIERCTKSPTISVLEKICDGINVPLAQLT 67 Query: 66 FISPPQSATPSVYDPQQ----QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 PQ + + + + + LF + P FE F +A + +S HE G+ Sbjct: 68 HTEMPQVSVITNDTVKNYSAWKGFELFVLFEFSPDKKFEIFRHVIAPHSERKSELHEAGI 127 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E+++ G + + + L GE ++F A+ H Y N Q V+ L+++ Sbjct: 128 REYIICTKGVFSIQIGDKTFNLQEGEALQFLANCKHKYFNSTNQEVNIIMLLYH 181 >UniRef50_C9KMM8 Putative transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM8_9FIRM Length = 219 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 12/182 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L ++ L +R+ +G SL +AE TGVSK+ML IE+ ++P++ L KI +GL Sbjct: 36 MDYLVHNIAINLNHIRKAKGMSLDVVAEQTGVSKSMLAAIEKGAANPSIGVLGKIMSGLR 95 Query: 61 VPFSTFI-SPPQSA--------TPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + + SP Q A TP+ D + V T FP E + I + G Sbjct: 96 IELTDLTQSPRQDAYLVDVEKLTPT-KDVAGEYRVWTC-FPIADNHVVEIYRIDVEPGGT 153 Query: 112 SESTPHEKGVIEHVVVIDGQLDL-CVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 S H + E+V V++G+L L + + T+ G+ RF+++ HIYRN G++ + F Sbjct: 154 YRSGGHGERTKEYVFVLEGELSLELANQKVYTIEAGQSFRFSSEEEHIYRNHGKEKISFA 213 Query: 171 SL 172 S Sbjct: 214 SF 215 >UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLI4_HAHCH Length = 192 Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L L ++QLR+ +L +LA+ + VS++ML QIER +++PT ATLW + + + Sbjct: 5 DLVARLGKRIQQLRKSEKLTLEQLAQQSNVSRSMLSQIERGQANPTFATLWNLTRAMGIE 64 Query: 63 FSTFISPPQ------------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA 110 +S + + + TP + +P Q ++ L P E + ++M Sbjct: 65 WSELVDESEGVSHSPIEHIIAAQTPKIDNP-QGGYHLSILSPPHLVGSIEWYELRMRPQG 123 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 ES H +G +EH+ V+ GQL++ + Q L G+ R+ ADV H +N G+ Sbjct: 124 KLESQAHTQGCMEHLTVLSGQLEVVSGTQSQRLAQGDTARYHADVAHTIQNPGD 177 >UniRef50_Q1R0K7 Transcriptional regulator, XRE family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0K7_CHRSD Length = 178 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 81/148 (54%), Gaps = 3/148 (2%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L++LR+ RG+SLS LAE +SK+ L Q+E +PT+ TLW +A L V FS ++ + Sbjct: 12 LRRLREARGYSLSALAERAAISKSTLSQLEAGHGNPTIETLWTLANTLGVTFSELLA-EK 70 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQ 131 + +V +P + + + P++ E + +Q+ASG I S H +GV E V+V++G Sbjct: 71 TGGVTVGEPGGGQVQVVARGRQSPRV--EVYLMQLASGEIKHSRGHPRGVRERVMVVEGT 128 Query: 132 LDLCVDGEWQTLNCGEGVRFAADVTHIY 159 L + GE F AD+ H Y Sbjct: 129 LRVGTPRALAVCRAGEQHEFDADLDHRY 156 >UniRef50_B9L7E6 Helix-turn-helix protein n=1 Tax=Nautilia profundicola AmH RepID=B9L7E6_NAUPA Length = 272 Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 11/152 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L +K R+ +G +LS LA GV+K+ L +IE N+++PT+ T+W IA L VPF + Sbjct: 3 LGEKIKFFRENKGLNLSELASRAGVAKSTLFKIEENKTNPTINTIWAIAEVLGVPFGELV 62 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 + V S+ + FE + + + + A + PH G +E + V Sbjct: 63 GEGEIKGEGV-----------SVVLIEKTDEFESYKMNLKTSAEYIAKPHFAGAVERIYV 111 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 + G + + + TL+ GE V F AD THIY Sbjct: 112 LKGDVKVGSVDDIHTLHSGETVEFEADKTHIY 143 >UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBJ6_9RHIZ Length = 213 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 13/172 (7%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 L+ + L+ LR++ G SL +LA +GVS+AMLGQIE +S+PT+ L +IA L V Sbjct: 21 KLSIIVGENLRHLRRKSGLSLEQLAAKSGVSRAMLGQIETGKSAPTINLLGRIAEALQVS 80 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITS---------LFPY-DPQLCFEHFSIQMASGAIS 112 + IS P +A +V P+ +A V+ S LFP+ DPQ E + + + + Sbjct: 81 VPSLISHP-AAGGTVIVPRDRATVLASSNGGFTCRALFPWGDPQ-SIEIYEVTIIAHHSE 138 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGG 163 + E GV + +VV+ G+++L + + L+ G+ + F AD H N G Sbjct: 139 DVAAFEPGVKKALVVLTGEIELTIAEDSPARLSEGDSIIFNADSPHTLHNPG 190 >UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=B2T7X7_BURPP Length = 212 Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 +++LR +R +L L+ A GVSK+ML +IER++++PT+A W++ L V + +P + Sbjct: 39 IQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSLFAPQK 98 Query: 72 S------------ATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 + T S +D + Q V P + FE + + + G S HE Sbjct: 99 TPEAIAVSGPHEIPTLSGHDAKYQLRV---WGPIELAGKFEWYELTLQPGGALVSNAHEP 155 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 G EH+ V+ G +++ G + L + R+ AD H RN G+ Sbjct: 156 GTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAVRNAGK 200 >UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA Length = 178 Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 6/177 (3%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++QLR++RG SL +AE TG++ + L Q+ER+ + P++ +L KIA L++P F Sbjct: 1 MLGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYF 60 Query: 67 ISPPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + P+ +P V Q++ + + L D E ++ GA S P Sbjct: 61 LLNPEDHSPVVRKDQRKVLRFPQSHLTYELLSPDLNRNMEVMMARLEPGAASCDEPLAHP 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 E +VV+ G +++ + GE + G+ + + A + H + GE+ + F S I P+ Sbjct: 121 GEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQ 177 >UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria (class) RepID=A1RBM5_ARTAT Length = 206 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 8/181 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ + ++Q RQ RGW+L +LAEA GVS+ M+ +E+ ++P+V TL +I+ L V Sbjct: 14 LSLAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGVGL 73 Query: 64 STFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISEST 115 + P+ V + A + TS + + E + + G S Sbjct: 74 PALVESPRPKPVKVTRSGEGAALWTSEQGGRGVLVAGTESPDVVELWDWTLGPGDQHGSE 133 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H G E + V+ G L + VDG TL G+ + F DV H Y N G V F + Sbjct: 134 AHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYANPGTDPVRFSLAVFG 193 Query: 176 P 176 P Sbjct: 194 P 194 >UniRef50_D0LSP1 Transcriptional regulator, XRE family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSP1_HALO1 Length = 187 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 9/176 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+ +KQLR+ RG S +++A+ G+ + +ER + +PT++ L + A L V + Sbjct: 13 LAHNVKQLREARGMSQAQIAKLAGIPRPTWSTLERGDGNPTLSVLLRAAAALQVSLEELV 72 Query: 68 SPPQSATPSVYDP------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 +PP++A VY ++ + + +L P DP + + A GA PH G Sbjct: 73 APPRAAA-RVYRKGSLTVRRRGRVTVENLLP-DPVPGLQLERMHFAPGAGMSGVPHTAGT 130 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ-TVHFHSLIHYP 176 E++ + G++ L G+ TL+ G+ V F D H YRN G Q ++ F ++ P Sbjct: 131 REYLCCMQGEVQLSAAGDSWTLSEGDVVVFRGDQKHGYRNPGAQPSLAFSVVVLAP 186 >UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO Length = 189 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 11/165 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+T K+LR+ R WSL A+ TGVSK+ML +IER +SPT L K+A G + S + Sbjct: 5 LATRFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISISQLV 64 Query: 68 SPPQSATPSVYDPQQQAMVI---------TSLFPYDPQLCFEHFSIQMASGAISEST--P 116 + + V P+ + V SL P Q F + + S T P Sbjct: 65 GGEELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSGTFPP 124 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 H GV E + V G+L L + E L G+ + + A V+H + N Sbjct: 125 HRAGVEETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDN 169 >UniRef50_B8IHD2 Transcriptional regulator, XRE family n=13 Tax=Alphaproteobacteria RepID=B8IHD2_METNO Length = 218 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 13/172 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST-- 65 L T+++LR+ SLS LAE +GV+K+++ QIERNE++PT+AT+W+++ L+V Sbjct: 36 LGKTIQRLRKAYNLSLSELAEQSGVAKSIISQIERNETNPTLATIWRLSQALDVSIERVL 95 Query: 66 -------FISPPQSA-TPS-VYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 FI A TP V + + + IT L + + + G +S Sbjct: 96 ATGDEEPFIEKSSRADTPILVSEDGKVKLAITGWIKTVEWLQW--YDVTAEPGGELDSDA 153 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 H++G +E + V++G+ ++ V G Q + GE +R+ D H R +QT Sbjct: 154 HQRGSVECLSVLEGEFEVEVAGAVQRVKTGETLRYRCDRPHTVRCISDQTAR 205 >UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=D2R569_9PLAN Length = 202 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 10/172 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L + + ++ +R+ +GW+L +LA +GVS++ML +IER ++PT+ ++IA + Sbjct: 12 EPLQQLVCDRVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGM 71 Query: 62 PFSTFISPPQSATP--SVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGAI 111 + P+ P V ++ + I +L P + E + + + +G Sbjct: 72 TLGDLVDSPEPPKPRIDVIRSDDRSFMFRDDSDCRIRTLSPLHLEKDVEFYELTLRTGGK 131 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 ES PH +G E + V G + L E L G+ + ADV H RN G Sbjct: 132 LESQPHFEGTREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIG 183 >UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin sensor n=21 Tax=Rhodobacterales RepID=Q1GC59_SILST Length = 188 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 +++ L LK+ R+ +G SL +A +GVS++M+ QIER ESSPT+ATLW + L V Sbjct: 6 DDILTLLPARLKEARRAQGLSLEAVANLSGVSRSMVSQIERGESSPTIATLWNLTRALQV 65 Query: 62 PFSTFISPPQSATP---------SVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 F+ + ++A V D + I L P + E + I ASG Sbjct: 66 DFAGLLEAGEAADRIDVLRARDVPVIDSKAAHCTIAILSPPEDVGGHEVYDISFASGGAL 125 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRF 151 S PH G E + V++G++ L L G+ R+ Sbjct: 126 ISQPHAPGTREQLTVLEGRVVLTSGTAEDRLEPGDTARY 164 >UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO Length = 207 Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 14/176 (7%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++ LR RGWS LA +GVSK ML QIE ++P++ TL ++A V + + P + Sbjct: 19 VRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLCRVADAFGVSIARLLEPAE 78 Query: 72 SATPSVYDPQQQ-----------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 +T V + A +++ L +P L E + +M G S H G Sbjct: 79 QSTVRVSAADEAPVLWRGPNGGLARLLSGLG--EPDLV-ELWDWRMEPGEALRSPDHAHG 135 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E + V+DG + VDG + GE V F AD H YR G+ V ++ P Sbjct: 136 TREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDGPVRLMMVVVTP 191 >UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5V7_MAGSM Length = 183 Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 89/168 (52%), Gaps = 16/168 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++QLR QR + LA+ + +A L +E+++++P++A ++KIA L + + + Sbjct: 10 IRQLRSQRKLTQQALADMAEIPRATLATVEKDDANPSLAVVYKIARALGLSIDQLLVTER 69 Query: 72 SATPSV----------YDPQQQAMVITSLFPYDPQLCFEH-FSIQMASGAISESTPHEKG 120 V D + +A+V++ P + F+ FS+Q +GA+ E PH G Sbjct: 70 ERIQVVPADQMRWVETADGRYRAVVVS---PGNALHFFQQIFSLQ--AGAVYEGRPHPPG 124 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 E++ V++G L+L + GE + L G+ RF +V H YRN EQTV Sbjct: 125 SEEYLHVLEGALELELAGECKRLVKGDSARFGGNVLHQYRNPTEQTVR 172 >UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH7_9PLAN Length = 205 Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 10/177 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 LS +++LR++RGWSL L+ A GVS++ML QIER E++PT+A +I+ + + Sbjct: 27 LSQRVRELRKERGWSLDSLSAACGVSRSMLSQIERGEANPTLAVTVRISQAFGIALGELV 86 Query: 68 SPPQSATP---------SVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 P S + + + I +L P + E + +Q+ + +S PH Sbjct: 87 EAPVSTSAIEVIRAEDRTFHYRSDDECRIRTLSPLHLEKDVEFYEVQLHANGKLQSAPHF 146 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE-QTVHFHSLIH 174 +G E + V G++ + + L G+ + DV H N G + V F +I+ Sbjct: 147 RGTREFLTVEKGKVQVNSGEDTTQLGPGDSASYRVDVPHAIMNIGRGEAVLFLVVIY 203 >UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces RepID=B5HZF0_9ACTO Length = 201 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 10/172 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++ L + L+ +K+ R +RG++L LA GVS+ ML QIE+ ++P++ T+ KI L Sbjct: 15 LDLLTQSLARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGDALG 74 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVI--TSLFPYDPQLC-------FEHFSIQMASGAI 111 + +T + Q + P +QA+ + T Y+ L E + ++ G Sbjct: 75 ISITTLLDYEQGPKVRIV-PAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPGES 133 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 S S PH G +E V V+ G+L L VDG + G F A+ H Y N G Sbjct: 134 SPSDPHPTGTVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQG 185 >UniRef50_B1HMP7 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HMP7_LYSSC Length = 194 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 6/163 (3%) Query: 11 TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP 70 L+++R+ + SL LA + VSK LG+IER E++PTV LWKI GL++P + +S Sbjct: 25 NLREIRKNKRMSLEELASVSNVSKLTLGKIERGETNPTVNILWKICRGLHIPLISLLSFE 84 Query: 71 QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP----HEKGVIEHVV 126 ++ + + Q + + +P F+ + G + ++ H G E V+ Sbjct: 85 ENVEVHRFGSEYQFAGHNNDWFVEP--LFKTNGTEWYRGRLDPNSEYSECHLAGSEEVVL 142 Query: 127 VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 V++GQL+L V + LN + ++F + H Y N ++ +H Sbjct: 143 VLNGQLELKVGEKTHLLNQWDVIKFKGEELHTYINHSDEKIHL 185 >UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8D2_THECD Length = 187 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 8/170 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ T++ LR GWSL +LA GVSK +L +E+ +P + TL +I+ L VP + + Sbjct: 11 VARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQALGVPLTRLV 70 Query: 68 SPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISESTPHEK 119 + V+ P++Q ++ L + + E + ++ G S PH Sbjct: 71 QVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPGEPRHSDPHAP 130 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 G E + V +G L + VDG+ + G FA D H Y N G F Sbjct: 131 GTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180 >UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Gammaproteobacteria RepID=A6VVG9_MARMS Length = 176 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 6/153 (3%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++++R +G SLS+LA G++K+ L +IE+ E +PT+ T+W++A LNVPF + Sbjct: 9 LGRNIQKMRMAKGLSLSQLALDAGLAKSNLSRIEQGEGNPTLETIWRLAVQLNVPFGDLV 68 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 + +S ++ + Q +I +P+L + + + A I +S PH G E + + Sbjct: 69 ATVES---TLGENGVQVRLIDQ-GEDNPRL--DVYWMSCAPNTIKQSEPHIAGTTETITL 122 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 I G+L + + + L G+ FAADV H Y+ Sbjct: 123 ISGKLLAGENNDLRHLEIGKAHTFAADVPHSYQ 155 >UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=D2BA96_STRRD Length = 192 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 11/188 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M +LA L +++LR RG +L ++A A VS +ML +ER + +PTV L +IA GL Sbjct: 1 MVDLA-ALGLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVI-------TSLFPYDPQLCFEHFSIQMASGAISE 113 V + ++ P+ V Q V + L P P + FE + G + Sbjct: 60 VSLAELVAEPEDRRVIVRRAADQDTVDEPGGWHRSILTPVVPGVNFEWIRTTLPPGCDAG 119 Query: 114 STP-HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH-- 170 P + +G E+VVV G L L V + L G+ FAAD H Y N G ++ Sbjct: 120 RFPAYAQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPCAYYVA 179 Query: 171 SLIHYPRS 178 +LI PRS Sbjct: 180 ALIMRPRS 187 >UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2 Tax=Bacteria RepID=Q1AWJ9_RUBXD Length = 203 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 9/181 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ R + ++ LR++RG +L LA +GVS+AM+ ++ER E PT+ ++A GL V Sbjct: 11 EDAVRRVGERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGV 70 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLC---FEHFSIQMASGAISEST--- 115 S + V +++ + ++ QL F ++ I E + Sbjct: 71 SLSELAGERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSG 130 Query: 116 ---PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 PH GV E++VV G+L + G L G+ + FAADV H + N GE ++ + Sbjct: 131 EFPPHRPGVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGECSYYLV 190 Query: 173 I 173 I Sbjct: 191 I 191 >UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales RepID=C0Z4P6_BREBN Length = 189 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 13/173 (7%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 LK++R+++ SL L+E +GVSK LG IER E++PT+ LWKI+ L++P S Sbjct: 19 LKKIRKEKHLSLEDLSELSGVSKLTLGNIERGETNPTIGVLWKISKCLSIPLLALFSTEN 78 Query: 72 SATPSVYDP------QQQAMVITSLF---PYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 S S + VI +F + + C + +Q S E H Sbjct: 79 SVNLSRAGKGLRIAGDNKDWVIEPIFQNVSNEIETCRAY--LQPNSSYYPEK--HHHNTT 134 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E V+ G L + V+ E LN + + F AD TH Y N ++ V H ++ Y Sbjct: 135 EIATVMSGTLSIHVNNESYVLNQYDSISFCADGTHSYINQSDELVVLHIILKY 187 >UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter RepID=B8HGK7_ARTCA Length = 201 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 11/165 (6%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST-FISPP 70 ++ +R+ RG +L+RL+E TG+S+A++ QIER ++P+ TL ++A GL++P FI Sbjct: 24 VRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDIPVGRFFIGQD 83 Query: 71 QSATPSVYDPQQQAM----------VITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 QS +P V ++ + I L D E I G + +TP Sbjct: 84 QSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGHDTSATPFTHS 143 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 E +I G+ D+ +DG +L G+ + +++++ H Y+N E+ Sbjct: 144 GEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEE 188 >UniRef50_A9FKR7 DNA-binding protein n=2 Tax=Myxococcales RepID=A9FKR7_SORC5 Length = 186 Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 12/183 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 LA L+ +KQLR+ RG + +LA+ GV +A +E ++PT+ L + A L V Sbjct: 6 ELAGRLAKNIKQLREARGLTQQQLAKLAGVPRATWAHLESGAANPTLGVLHRAAAALQVS 65 Query: 63 FSTFISPPQSATPSVY--------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 +S P+ AT +Y P Q ++ L P DP E I + G Sbjct: 66 IEEMLSAPR-ATCQLYARDALPTRSPGQ--ALVRKLLP-DPIPGMEMDRIAIPPGGRMTG 121 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PH G E++ G+L L V GE L G+ F D H Y N G+Q +S++ Sbjct: 122 VPHTPGTREYLTCESGELQLVVSGERFKLGSGDVAVFRGDQRHSYHNPGKQPAVGYSVVV 181 Query: 175 YPR 177 R Sbjct: 182 LAR 184 >UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BB48_9RHOB Length = 218 Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 13/165 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LRQ + L++L E TG+S AML +IER + PT+ATL +IA V F Sbjct: 31 IGPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGLDHFF 90 Query: 68 SPPQSATPSVYDPQQQAMV---------ITSLF-PYDPQLCFEHFSIQMA--SGAISEST 115 P + A P + +Q+ + ++ LF D + F +A SG SES Sbjct: 91 GPGEDA-PVLEIVRQRDRLKLGDKTSGPLSYLFESLDFPVTKSRFQSYLAEFSGNGSESM 149 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 PH E + VI+G L+L + G + L+ G+ + F A H YR Sbjct: 150 PHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYR 194 >UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2 Length = 201 Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 10/167 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L + ++ LR++R + RLAE GVS ++ QIER +P+ ATL ++A GL +P + Sbjct: 20 LGSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQLL 79 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYD--------PQL--CFEHFSIQMASGAISESTPH 117 P+S + V +++ + L D P L E + G + +TP+ Sbjct: 80 EAPESKSVVVRKNERRRLDGHGLANDDGGSYELLTPDLNGALEATWVVTPPGYDTSATPY 139 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 E +V+ G D+ +DG L+ G+ +R+A+++ H Y N E Sbjct: 140 HHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSE 186 >UniRef50_A1RRK6 Transcriptional regulator, XRE family n=3 Tax=Thermoprotei RepID=A1RRK6_PYRIL Length = 516 Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 10/167 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L +LR+++G SLSRLA GVSK+ L +IE ++ SP++ TLW IA L VPF + Sbjct: 5 LGNRLSELRRRKGLSLSRLARLAGVSKSTLWEIENDKISPSINTLWAIANALGVPFGELV 64 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 + V D + +I + E + +++ S AI S PH +E V V Sbjct: 65 ----TYDIVVKDEGVEVRLIERVENK------EVYLMKLRSNAIKRSEPHRNSPMEVVQV 114 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 I G + + + + G+ +F H+Y G+ +LI+ Sbjct: 115 IKGVMIVGSRDKLSLVGEGDFAKFYGGREHLYMAVGDDAEAIVTLIY 161 >UniRef50_C9NG53 Transcriptional regulator, XRE family n=3 Tax=Actinomycetales RepID=C9NG53_9ACTO Length = 194 Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 16/183 (8%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R L+ ++ R + G SL L VSK L +E+ + +P ATL ++A L + S Sbjct: 9 RTLARNVRAARTRAGLSLDELGRRAKVSKGALVGLEKAQGNPNFATLVRLADTLGISVSA 68 Query: 66 FISPPQSATPSVYDPQ------------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + P V + +++T+ P E + ++ G Sbjct: 69 LLEGPAEGRVRVVSADAVMPLWAGERGSEARLMLTTSGPAP----VEVWRWKLEPGEEYP 124 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH+ GV+E V V G++ L VDG ++ G+ F D TH YR G T H + Sbjct: 125 SHPHQAGVVETVSVTSGRMTLVVDGTEHSVEAGQTATFDGDATHAYRGSGSGTCHLIMTV 184 Query: 174 HYP 176 H P Sbjct: 185 HIP 187 >UniRef50_C9ZEI0 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZEI0_STRSW Length = 204 Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 89/180 (49%), Gaps = 11/180 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ ++ LR+QRG SL+RLA G++K L +E+ +PTV TL+ IAT L VP + Sbjct: 8 VVARNVRLLREQRGLSLARLAREAGLAKQTLSNLEQGTGNPTVDTLFSIATALGVPVTRL 67 Query: 67 ISPPQSAT-----PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMA---SGAISESTPHE 118 ++ + V + + + +L E++ +++ GA PH Sbjct: 68 VAEREQVMTVQRGADVVWKEHEGLETRALDHVYGSGVIENYLVRVGPDRDGAGRPIEPHP 127 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN-GGEQTVHFHSLIHYPR 177 G +EH+ VI G++ + L+ G+ VR+ D H+Y++ GE VH ++ PR Sbjct: 128 VGTLEHLYVISGRVRVGPAESPVELDAGDFVRYPGDRPHVYQSLDGESLVHI--VVSVPR 185 >UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT Length = 201 Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 9/182 (4%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R + ++ LR+ RG +L+ LA G+S +ML +ER E + TV L +IA L + Sbjct: 20 RAIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIAR 79 Query: 66 FISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGA-ISESTPH 117 + +V +Q +V + P P + FE + G E PH Sbjct: 80 LVEDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGPH 139 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF-HSLIHYP 176 + E+++V++G+L L +DG L G+ + H YRN G T + ++I P Sbjct: 140 QADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLAMIERP 199 Query: 177 RS 178 R+ Sbjct: 200 RT 201 >UniRef50_C1B633 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1B633_RHOOB Length = 208 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 82/176 (46%), Gaps = 19/176 (10%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++ RQ R SL LA ++ VS++ML IE PTV L +IA L V S + Sbjct: 28 LGARIRTERQLRRLSLEDLARSSEVSRSMLSAIELGAKVPTVLVLDRIAVALGVSVSRLL 87 Query: 68 SP---------PQSATPSVYDPQQQAMVITSLFPYDPQLCFE----HFSIQMASGAISES 114 P +A V D ITS P L FE F + +G E Sbjct: 88 DEEREGRAIHLPVAAQRVVSDAAGWRRKITS--PVVHGLDFETGRLEFDPLVDAG---EF 142 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN-GGEQTVHF 169 PH KG IEH+ V GQL++ + G+ L G+ + F +DV H +RN G +TV F Sbjct: 143 APHHKGWIEHITVERGQLEITLAGQAYLLGEGDALYFESDVIHAFRNPGRSKTVAF 198 >UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A8GBR8_SERP5 Length = 189 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 9/178 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+ L LRQQ+GWSL LA+ TG+S+A L ++ER E+SPT + L K+ + + S + Sbjct: 12 LAQRLSDLRQQQGWSLEELAQQTGISRATLSRVERAETSPTASLLNKLCSAYGLTMSRLL 71 Query: 68 SPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGA-ISESTPHE 118 S + P + +QQ + + S+ P E + +GA I+ P Sbjct: 72 SEVEDEPPELLHREQQTVWVDRASGFHRCSVSPPAALYKAEFIECTLEAGAVIAYDAPSI 131 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + H+ ++ G+L+L ++G L G+ +R+ + G + H+ +I P Sbjct: 132 HALEHHLWLLAGRLELTLEGRTFQLEPGDCLRYRLFGASKFHASGPEPAHYTLVISRP 189 >UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia RepID=B2A1T2_NATTJ Length = 192 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 13/168 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + T+K+LRQ + L ++E TG+S +L QIER + ++ +LWKI+ L VP +F Sbjct: 15 IGETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSFF 74 Query: 68 SPPQSATPSVY---DPQQ----QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 SV D +Q ++ VI L D E + + SG + E HEK Sbjct: 75 EELNREKVSVVRKEDRKQLDIPRSNVIYQLLSPDMNRKIEMLLVTLKSGEVEE---HEKV 131 Query: 121 VIEHV---VVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 E +VI G+L + V E TL G+ F + + H + N G++ Sbjct: 132 THEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDE 179 >UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes RepID=D1YD37_PROAC Length = 258 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E LA + +KQ R R W+L +LA GVS+ +L +E+ +P V TL +++ L V Sbjct: 70 EPLAHAIGARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGV 129 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISE 113 + PP S P + Q A + T + +P E + +A + Sbjct: 130 GLPALVEPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAPSERHD 189 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H G E + V +G + + VDG L G+ + F D H Y N + + F + Sbjct: 190 SEAHSDGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARFSLTV 249 Query: 174 HYP 176 P Sbjct: 250 FEP 252 >UniRef50_A6V7P4 DNA-binding protein n=45 Tax=Bacteria RepID=A6V7P4_PSEA7 Length = 258 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 7/160 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L+ ++K+ R++ G S+S LA+ G++K+ L Q+E +P++ TLW +A L+V + Sbjct: 83 LLAASIKRERERLGLSISELAKRAGIAKSTLSQLEAGVGNPSLETLWALAMALDVQVTRL 142 Query: 67 ISPPQSATPSVYDPQ------QQAMVITSLFPYDPQ-LCFEHFSIQMASGAISESTPHEK 119 I+ P+S + + +QA +L P + + + + + GA S PH Sbjct: 143 IAQPRSRVQVIRADEGATVASEQAHYAATLLAVCPAGVQRDLYRLVVEPGAPRLSDPHLP 202 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 G +EHVV+ G+ L G L+ G+ ++AD H++ Sbjct: 203 GTLEHVVICHGRARLGPVGHPVELSAGDYASYSADEAHMF 242 >UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Tax=Alphaproteobacteria RepID=B2S813_BRUA1 Length = 650 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 6/176 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N A + L +LR++RG +L LAE + +S+A + +E +P + TLW +A L Sbjct: 1 MSNSAE-IGMNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + F + D ++ P E F + + + A + H G Sbjct: 60 IEFGELVGARNDVEVVEADGISVRLIDRQTRPR----TVEAFLLDLPANAKRHADAHVHG 115 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V E+VVV+ G + + L+ G+ +FAADV HIY +G E + ++I YP Sbjct: 116 VSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSSGAEPSRAIVTII-YP 170 >UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepID=B6BEY2_9RHOB Length = 182 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 11/163 (6%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + ++ +++ R + G SLS LA G++K+ L Q+E +P+V TLW +A L VP S Sbjct: 6 QMIAAAIQRERNRAGKSLSALAAQAGIAKSTLSQLEAGNGNPSVETLWALAAALGVPLSL 65 Query: 66 FISPPQSATPSVYDPQQQAM---------VITSLFPYDPQLCFEHFSIQMASGAISESTP 116 +T + + + + V+ S P + + + + + M G + P Sbjct: 66 LFETEAPSTTLIRAAEGEPLESEQSDFTAVLLSRCPSN--VRRDIYRVVMQPGEARRAQP 123 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 H +G +EH++V GQ+ DG+ L G+ + D H Y Sbjct: 124 HPRGTVEHMLVCSGQMRAGPDGQEDVLQPGDYYTYPGDRPHSY 166 >UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771 RepID=UPI00019046BF Length = 280 Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 12/166 (7%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI-SPP 70 +K LR ++ L +LA TG+S AML +IER + PT+ TL +IA V F + Sbjct: 105 IKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHFFKADK 164 Query: 71 QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE-----------STPHEK 119 + +V +Q+ + + P FE A + S PH+ Sbjct: 165 EEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDSPPSEPHQH 224 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 G E + V+ G+L + VDG+ L+ G+ + F + V H YR GE+ Sbjct: 225 GSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSYRREGEE 270 >UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax=Idiomarina loihiensis RepID=Q5QYK8_IDILO Length = 191 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 9/172 (5%) Query: 15 LRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSAT 74 R+Q G SL LA+ +SK ML QIE+ ++P++ L K+A L V + ++ Sbjct: 20 FRKQYGMSLDELAKNAEISKGMLVQIEKGRANPSIGILCKLANALAVSVADIVAVSDDPK 79 Query: 75 PSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVV 126 ++ PQ V L + E + M S H KG IE + Sbjct: 80 VTIRQPQDIPTLWNGDHGGVARLLAGSKGTIMIELWRWSMFPKEQFVSEAHSKGTIELIH 139 Query: 127 VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 V G LD+ V+ E TL+ G+ + DV H Y+N + VHF ++ Y +S Sbjct: 140 VEGGCLDVLVNEETYTLSAGDSMTAEMDVAHTYQNSTNEPVHF-TMTVYEKS 190 >UniRef50_D0L2V7 Helix-turn-helix domain protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L2V7_GORB4 Length = 182 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 7/176 (3%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ + + +LR R SLS LA A G+ K L ++E + +PT+ TL+ +A L V Sbjct: 10 EDRRTAIGARITELRTARSMSLSALARAAGIGKGSLSELESGQRNPTIDTLYAVAGPLGV 69 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 P S + +S T ++ P E F + + G + ES H GV Sbjct: 70 PLSALLG-EESGTEGSGRSLSARLLHVEHHPDG--AVTEVFWLTVTPGDVRESPAHGPGV 126 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR-NGGEQTVHFHSLIHYP 176 +E+V V+ G L G + GE +++ +DV H YR + G Q V IH P Sbjct: 127 VENVHVVSGNLTAGRRGAENSAGPGETLQWISDVRHTYRSDAGAQAVLT---IHTP 179 >UniRef50_D2B674 Putative transcriptional regulator, XRE family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B674_STRRD Length = 199 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 15/165 (9%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF- 66 ++ L++ R RG S+ LAE TGVSKA++ Q+ER ++PTV L ++AT L + F Sbjct: 25 IAANLRRARLGRGLSVRELAELTGVSKALISQVERGVANPTVEVLSRLATSLELTFGELT 84 Query: 67 ---------ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 I +S +V D I +LF + FE + +G S + H Sbjct: 85 RIHLVGPEVIRRSESVPLAVGD-----TAIRTLFAAPDRRRFELAEGDIPAGTRSAKSSH 139 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNG 162 +G +EH V++G++ + + TL G+ +RFA++ H+Y G Sbjct: 140 GRGSVEHAYVVEGEVTVETEEWSVTLTAGDALRFASESDHVYTTG 184 >UniRef50_Q9R6H1 Tiorf88 protein n=1 Tax=Agrobacterium tumefaciens RepID=Q9R6H1_RHIRD Length = 163 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 7/158 (4%) Query: 22 SLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQ 81 SLS LA ++K+ L ++E + +P++ TLW IA+ L +PFS S + + Sbjct: 2 SLSALATKANLAKSTLSELEAGKGNPSIETLWAIASALEIPFSFLFESASSHSQLIRADA 61 Query: 82 QQAMVITS-------LFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDL 134 A+ S L P + + + + G+I + PH +G IEH++VI G + L Sbjct: 62 GVALAADSSDFRTVLLNKCPPASRRDLYRLTLRRGSIRNAEPHPRGTIEHIIVISGAVRL 121 Query: 135 CVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 G + + G+ R+ D H Y E V +L Sbjct: 122 GPTGAIEDIGPGDYYRYPGDGPHSYEALSENAVILLAL 159 >UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMM2_9BACT Length = 182 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 9/160 (5%) Query: 11 TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP 70 T+K+LR + +L LA+ +G S + L Q+ER+ SPTVA+L KIA L V ++F S Sbjct: 6 TVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITSFFSGD 65 Query: 71 QSATPSVYDPQQQ---------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 S T S+ + + +V SL + E + GA S + Sbjct: 66 DSETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDDYNIHLG 125 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 E V V+ GQ+++ +DG TLN G+ + ++V H ++N Sbjct: 126 EEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKN 165 >UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Actinomycetales RepID=D2PZI7_9ACTO Length = 200 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 9/162 (5%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 R L L+ R ++G SLS LA +G++K L Q+E +PT+ T++ ++ L VP S Sbjct: 11 GRVLGVNLRARRDEQGISLSELARRSGIAKGTLSQLESGAGNPTIETVFSLSNALGVPVS 70 Query: 65 TFIS-PPQSATPSVY----DPQQQAMVITSLFPY--DPQLCFEHFSIQMASGAISESTPH 117 +S PP S V D A V + +P FE + ++ G + ST H Sbjct: 71 ALLSEPPASDLVLVRSADTDVLSGAAVDLRMLRRLENPGSLFEIYDQRIRPGKVQHSTGH 130 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 EH VV+ G++ + Q L G+ + F AD H Y Sbjct: 131 PG--TEHHVVLTGRVRITARDRSQELGPGDYLAFRADAPHEY 170 >UniRef50_A3MUA0 Transcriptional regulator, XRE family n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=A3MUA0_PYRCJ Length = 528 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 10/173 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L R + + LR++RG SLS LAE GVSK+ L +IE +P+V TLWKIA L V Sbjct: 3 EYLKRSVGERIAALRRERGLSLSELAERAGVSKSTLYEIEMGRVAPSVTTLWKIANALEV 62 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 F + P+ S ++++ + + D FE + +++ A+ S PH V Sbjct: 63 GFGALV--PEWVLVS-----ERSVDVLLIERGD---GFEAYLMRLKPYAVHVSRPHVGVV 112 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E+V V G + L GE F +V H Y G +T L++ Sbjct: 113 SEYVFVAKGAAVVGPVDSPIFLREGEATEFPGNVPHFYAPFGGETRLIVRLVY 165 >UniRef50_C2LK61 Transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK61_PROMI Length = 192 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 3/156 (1%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 +L +KQLRQ R SL+ L+ +G+SKA L ++E +S+P + TL IA L P Sbjct: 12 YLGNKVKQLRQSRNLSLNELSRKSGISKAALSKLESGDSNPRIDTLEAIAIALGFPLGDL 71 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQL--CFEHFSIQMASGAISESTPHEKGVIEH 124 S + P + + F + + E + I+M GAI S H G EH Sbjct: 72 FSFTREEYPRLERHKPIVGDYAQEFKFRIGIGNITEIWHIEMKHGAIINSPAHADGTQEH 131 Query: 125 VVVIDGQLDL-CVDGEWQTLNCGEGVRFAADVTHIY 159 ++V G+L + + E L G+ F + H Y Sbjct: 132 IMVYSGKLMMRFANDETVLLETGDFYAFHGNAPHSY 167 >UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=Bacteria RepID=C6CLM7_DICZE Length = 195 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 21/179 (11%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R L+ L LR++RGWSL L++++G+S+A L ++ER ESSPT L ++ S+ Sbjct: 16 RRLAERLAALRRERGWSLDELSQSSGISRATLSRLERMESSPTAVLLGRLCAVYGCTMSS 75 Query: 66 FISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSI--------------QMASGA- 110 ++ + P QQ + I DP+ F S+ ++ +GA Sbjct: 76 LLAEVEIQLPQKLSAAQQPVWI------DPETGFIRRSVSPPSAGFRAEMIHGELPAGAR 129 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 I P G+ H+ V++GQL + ++G TL + +R+ + N G V + Sbjct: 130 IDYHAPPLAGLEHHLYVLEGQLVMTLEGVIHTLGPQDSLRYRLYGASGFHNPGPDAVRY 188 >UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium RepID=B1M8P3_METRJ Length = 202 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 11/170 (6%) Query: 18 QRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISP-------- 69 ++G SL LA +GVS++M+ +IER+E+ P+ L ++A L V FS ++P Sbjct: 32 EQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGVTFSRLMAPATEREILL 91 Query: 70 -PQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA-ISESTPHEKGVIEHVVV 127 P S P + D + + + P P + + GA E T H +GV E++ V Sbjct: 92 IPASRQPILRD-EASGYLRRCISPVLPGRGIDWVLNTLPPGASTGEFTAHRRGVSEYIYV 150 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 + G+L + + G+ + F AD H + N G + + +I R Sbjct: 151 LRGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEACEYFLVIDPSR 200 >UniRef50_C7PXU7 Transcriptional regulator, XRE family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXU7_CATAD Length = 215 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 7/145 (4%) Query: 22 SLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP-------QSAT 74 SLS +A +SK+ L Q+E +P++ TLW + T L +PF PP ++ + Sbjct: 55 SLSEVARRADLSKSTLSQLESGIGNPSLETLWALCTALGIPFGQLFDPPPPRTQVIRAGS 114 Query: 75 PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDL 134 + +Q + L P + + ++ G++ S PH GV+EHVVV G+ + Sbjct: 115 GAAVAAEQADYRVLLLATCPPGARRDVYRVEAEPGSVRRSDPHAPGVVEHVVVCAGRALV 174 Query: 135 CVDGEWQTLNCGEGVRFAADVTHIY 159 V E L G+ + + DV H++ Sbjct: 175 GVAEEPVELGPGDYIVYPGDVPHLF 199 >UniRef50_A4X7C8 Helix-turn-helix domain protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X7C8_SALTO Length = 203 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 7/169 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +LAR + + + +LR G SL+ LA A +SK L IE+ +PT++TLW +AT L VP Sbjct: 24 DLARTVGSNVHRLRNTAGMSLADLATAGDISKTTLHGIEQGHGNPTLSTLWALATALRVP 83 Query: 63 FSTFISPPQSATPSVYDPQQQAMV----ITSLFPYDPQL--CFEHFSIQMASGAISESTP 116 + P T V Q+ + +++ + +L E + I +A ST Sbjct: 84 LGELLETPTPRTDVVRADDQRPRISGDAVSARLLHRIRLHGTVEVYDIDVAQ-TTQHSTA 142 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 H GV E +++ G + TL + +RF A+ H Y+ G+ Sbjct: 143 HLPGVQECLILTHGSITTGPTDAAVTLTAHDSIRFDANHRHQYQGHGQH 191 >UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=Bacillus RepID=A0RIX6_BACAH Length = 237 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 14/168 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + ++++RQ+RG +++++ E TG+SK + Q+E N++SP+++TL I+ LNVP + Sbjct: 59 IGSAIREIRQRRGITIAQICEGTGLSKGFMSQVENNKTSPSISTLETISNFLNVPLPYLL 118 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFS---------IQMASGAISESTPHE 118 + V +++ S++ D Q EH + +++ +G E+TP+ Sbjct: 119 LEQKDRLKVVKKVERKY----SVYGKDEQRI-EHVAEQGGLRLNLVEIPAGFPKENTPNA 173 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 E +V+ G+L++ + + G+ + A V HI RN GE+T Sbjct: 174 HEGEECHLVLRGKLEVQHGEDVAIVEEGDSFSWNACVPHIVRNIGEET 221 >UniRef50_C8XHM1 Transcriptional regulator, XRE family n=2 Tax=Frankineae RepID=C8XHM1_NAKMY Length = 187 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 2/160 (1%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L+ R ++G S+ LA+A G+ K L +IE +PT++TL+ +A L P Sbjct: 5 DLPHLIGERLRAARTEQGLSVGGLAQAAGIGKGSLSEIENGTRNPTLSTLYGLANALGRP 64 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFP--YDPQLCFEHFSIQMASGAISESTPHEKG 120 S ++ A S + + ++ P D + E ++I++ G+ S H Sbjct: 65 LSWLLAEQVGAQVSSPGIAARLLDTSATGPSGTDDDVTVEVYAIRLEPGSTHVSQAHGPA 124 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 V+EH++V+ G++ G TL+ G + +D H YR Sbjct: 125 VVEHLLVVRGRVAAGRQGAEVTLDTGMSTSWVSDGPHSYR 164 >UniRef50_UPI0000557893 COG1396: Predicted transcriptional regulators n=1 Tax=Bacillus anthracis str. A2012 RepID=UPI0000557893 Length = 83 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 44/66 (66%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + L+ LK +R++ SL ++++ TGVSK M+GQIER ESSPT+ T+WKIA G Sbjct: 16 MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGFK 75 Query: 61 VPFSTF 66 F F Sbjct: 76 SVFYFF 81 >UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31672 Length = 196 Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 12/178 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + ++ LR+ SL LAE +GVS ML Q+ER E+SPT+ +IA GL++ S + Sbjct: 12 IGSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQLL 71 Query: 68 SPPQSATPSVYDPQQQAM-----------VITSLFPYDPQLCFEH-FSIQMASGAISEST 115 + ++ Q++ V+T P H + A+G + Sbjct: 72 RLDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDPP 131 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 HE G E ++ G++ L DG L+ G+ V F AD+ H + N G + +++ Sbjct: 132 VHEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVV 189 >UniRef50_C9ND81 Transcriptional regulator, XRE family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9ND81_9ACTO Length = 190 Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 3/154 (1%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 +++ R+QRG S + LA G+ KA L Q+E +PT+ TL +A L +P + ++ Sbjct: 21 IRRRREQRGMSSAELARRAGLGKATLSQLEAGRGNPTIETLDALAIALRIPLTDLLARDT 80 Query: 72 SATPSVY---DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVI 128 P + D + L E + ++M G + PH G IEH++V Sbjct: 81 DPGPVLVPGTDLADGEVGRELLRRISSGNSLEIWRLRMPPGTDLDGVPHATGTIEHLLVS 140 Query: 129 DGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNG 162 G++ L G+ + FA D H+YR G Sbjct: 141 SGRVTAGPTDAPSDLYTGDLLAFAGDAPHLYRTG 174 >UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HW94_9ACTO Length = 194 Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 11/173 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L +LR +RGWSL LAE +GVSK+ L + ER E SPT + L ++ S + Sbjct: 15 LGVRLAELRAERGWSLGELAERSGVSKSTLSRAERAEISPTASLLNRLCGVYGRTMSQLL 74 Query: 68 SPPQ----------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA-ISESTP 116 S + SA V++ + V S+ P P L E ++A+GA ++ P Sbjct: 75 SEIEAEAEPAPLVRSAGQPVWEDRAAGFVRRSVSPPHPGLRGELVEGRLAAGADLAYDRP 134 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 G+ +H+ V++G LD+ L+ G+ +R +R G V + Sbjct: 135 PVPGLEQHIWVLEGALDVTAQDVEHHLDTGDCLRLRVWGPTRFRCAGPDAVRY 187 >UniRef50_UPI0001AEDAD5 hypothetical protein SalbJ_26149 n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AEDAD5 Length = 199 Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 11/177 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+ +++ R RGWSL L ATG+SK +L QIER E++PT+ L ++A L + + Sbjct: 26 LAQNVRRHRLARGWSLRELGAATGISKGLLSQIERAEANPTLEILTRLADVLATTCTDLL 85 Query: 68 SPP-------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 P ++A P+ +P + ++ LF E + ++ A S+ + H Sbjct: 86 RRPLLRPEIVRAAEPA-EEPGETSVHF--LFAQGELGRAEFYRSRLHPHAQSQVSSHGTD 142 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 +E+V V+ G++ L VDGE L+ G+ RF+ +H Y E T H+++ YPR Sbjct: 143 SVEYVTVVSGRVVLVVDGERYALDQGDTARFSGLSSHHYET-EESTAVTHTVVGYPR 198 >UniRef50_B6A104 Transcriptional regulator, XRE family n=49 Tax=cellular organisms RepID=B6A104_RHILW Length = 207 Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 11/189 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E ++ +S LK R+ G+SL L+ +GVSK ML +IE+ ++P++ATL + AT L Sbjct: 15 VERVSATVSQNLKIFRRDSGFSLDELSRRSGVSKGMLVEIEKGTANPSIATLCRAATALG 74 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGAIS 112 V + F+ S + P+ + + T L + E + M G + Sbjct: 75 VSVADFVGVASSVPVRIVPPEDASTLWRGPNGGSATLLVGTNGPDEIELWRWSMFPGEMF 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF--- 169 ES H G +E + V G+L ++ Q + G V + H Y N GE + F Sbjct: 135 ESPGHSPGTLELLNVEVGELTFRLEETEQAVRAGSSVLARTESPHAYLNRGECELRFVMA 194 Query: 170 HSLIHYPRS 178 + + PRS Sbjct: 195 VAELQRPRS 203 >UniRef50_UPI000050FEC2 Helix-turn-helix family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEC2 Length = 183 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 7/159 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ +K+ R + SLS +A G+ K+ + +E +P+V T+W +A L++P + + Sbjct: 9 IAAAIKRERLRADLSLSEVARRAGIGKSTMSGLEAGTGNPSVETMWALAAALDIPLARLL 68 Query: 68 SPPQSATPSVYD------PQQQAMVITSLFPYDPQLCFEH-FSIQMASGAISESTPHEKG 120 PPQ V+ P A +L P + IQ G +S PH G Sbjct: 69 DPPQHEVALVHAKDLPSLPSNTANYAATLLSASPANARRDVYFIQAEPGQPRDSQPHPIG 128 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 +EHV++ G + V G L+ G+ + + D H + Sbjct: 129 TVEHVILGQGAARIEVLGNSYELHVGDYLTYPGDQPHKF 167 >UniRef50_B2PVG1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PVG1_PROST Length = 185 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 3/151 (1%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++ LRQ R SL+ LA +G+SKA L ++E +S+P V TL IA L P S + Sbjct: 13 VRLLRQARNLSLNELARLSGISKAALSKLESGDSNPRVDTLEAIAIALRFPLSDLFTLQH 72 Query: 72 SATPSVYD--PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVID 129 A P PQQ F + E + + M GAI S H G EH+++ Sbjct: 73 EAYPYFVKSAPQQGDYSQQFKFRINMGNISEIWQLNMKRGAIINSPAHMSGTHEHIMLHT 132 Query: 130 GQLDLCVDGEWQT-LNCGEGVRFAADVTHIY 159 G L L + E L G+ F+ D H Y Sbjct: 133 GSLMLRLKDEQTVLLEEGDFYAFSCDFPHSY 163 >UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD Length = 205 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%) Query: 6 RF-LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 RF + L+ R+QRG SL+ +AE TG+SK L ++ER+ SP++ +L IA + + + Sbjct: 5 RFPIGERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVGLAVA 64 Query: 65 -TFISPPQSATPSVYD-PQ---QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 F P + SV P + + T L P D + ++ G+ + H Sbjct: 65 DVFAVAPVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGSGGDELYHLP 124 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 +E V+ G+++L E TL+ G+ FAAD H +RN G+ Sbjct: 125 SQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGD 169 >UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A23 Length = 178 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 10/168 (5%) Query: 10 TTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISP 69 T +++ R RG ++ +LA+ GVS ++ Q+ER + P++ T+ +IA L++P + Sbjct: 4 TRIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQE 63 Query: 70 PQSATPSV--YDPQ------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 P T +V +D + A+ T P +L E + G +S Sbjct: 64 PDEETVAVIRHDDRYRISSPHHAITYTRASPGGAKL--EVLEGVLEPGGVSSDELRSHPS 121 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 E VVVI G+L + V + L G+ F + V H +RN G T F Sbjct: 122 EECVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARF 169 >UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus RepID=B8G9C1_CHLAD Length = 211 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 15/163 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L+ LR+++ S+ LAEA+G++ L IE +SP+V+TL ++A L VP S F +P Sbjct: 26 LRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPISAFFTPEV 85 Query: 72 SATPSVYDPQQQAMVITSLFPYDP---------QLCFEHFSIQMASGAIS--ESTPHEKG 120 VY P QA I S+FP+ E + + GA S E+ H Sbjct: 86 PQQRIVYTPAGQA--IASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEAIIHTGQ 143 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 E V ++GQ+ V + T+N G+ + F A + H + N G Sbjct: 144 --EFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHNPG 184 >UniRef50_Q6MKI2 Putative DNA-binding protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKI2_BDEBA Length = 188 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 LA+ L+ + +LR++R + + LA+ GV ++ L +E +P++ L K+ L V F Sbjct: 7 LAQNLAAQITELRKKRQLTQAALAKLAGVPRSTLTNMESGMGNPSLVNLAKVCAALQVSF 66 Query: 64 STFISPPQSATPSVYDPQQQA-------MVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 ++ P+S T + + A + + L P DP +++ GA P Sbjct: 67 EELLATPRSQTKLIRKDEIPANKKAKGNVTVYKLLP-DPIPGMAIDRMELEVGARMGGIP 125 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN-GGEQTVHFHSLIHY 175 H G E++ + GQ+ + V GE L G+ + F D H Y N G + + + Sbjct: 126 HSSGTKEYLHCVQGQMTVVVSGESFELKPGDVLAFPGDSAHNYVNTGATKAIGLSVVTMT 185 Query: 176 PR 177 PR Sbjct: 186 PR 187 >UniRef50_B5XVI4 DNA-binding protein n=3 Tax=Enterobacteriaceae RepID=B5XVI4_KLEP3 Length = 189 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 7/161 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ + + +++LRQ RG SL+ L++ +GVSK L ++E SSP V TL IAT L +P Sbjct: 12 LSLNIGSKIRRLRQSRGISLNDLSKLSGVSKGALSKLESGSSSPRVDTLDAIATALRLPV 71 Query: 64 STFISPPQSATPSVYD----PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 +S P P + + ++ F P E + +QM S H + Sbjct: 72 GDLLSGGSRMYPRFEKHRPVPGEYSQMMK--FRIGPGNTSEIWLLQMEPQVTIHSPGHSE 129 Query: 120 GVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIY 159 G EH++V G L L E TL G+ F+A V H Y Sbjct: 130 GAHEHILVHSGTLRLRFSQYEVITLEPGDFYAFSAQVAHTY 170 >UniRef50_C5BLI6 DNA-binding protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLI6_TERTT Length = 185 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 10/168 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E LAR L+ ++QLR +RG++ ++A + + IE ++PT++ L K+A L Sbjct: 3 LETLARNLAGNVRQLRSERGFTQQQMATLAQIPRPTWASIESGAANPTLSVLSKLANALQ 62 Query: 61 VPFSTFISPPQSAT---PSVYDPQQQAMVITSLF-PYDPQLC--FEHFSIQMASGAISES 114 V +S P+S + + P ++ +F P P+L E +Q+ A + Sbjct: 63 VSIEELVSAPRSQAAFFAAGFGPHRKRR--GGIFSPMVPELVPGVEISRLQIEPAATVQG 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRN 161 PH G E++ G+L+L + DG W L G+ V F D H Y N Sbjct: 121 APHTHGTREYLTCERGKLELRLDDGSWFLLP-GDAVAFRGDQKHAYVN 167 >UniRef50_Q1EMV7 Putative DNA binding regulatory protein n=1 Tax=Streptomyces cattleya RepID=Q1EMV7_STRCT Length = 185 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 25/189 (13%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E + + +++LR+ RG S++ L+ +GVS+A L +E +PT+ T+ IA L + Sbjct: 5 EGVGVTVGAQVRRLREFRGLSVAELSRLSGVSRATLSMLESGRGNPTIETVSAIAVALRL 64 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE-------- 113 P + DP V+ P PQ + ++ +G SE Sbjct: 65 PLGDLL----------VDPTPPEPVLRPGTPR-PQTSRQDLLDRIGAGGHSEIWRLRLCG 113 Query: 114 ------STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 S PH +G +E VV + G+L L L G+ V F AD H Y ++ V Sbjct: 114 AGRRVDSPPHTRGTLERVVALRGRLRLGPVDRPVVLATGDFVVFPADEPHFYEAVDDEDV 173 Query: 168 HFHSLIHYP 176 ++ YP Sbjct: 174 DAVIVMTYP 182 >UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae RepID=Q5LWB9_SILPO Length = 193 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 38/181 (20%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + T +++LR+ RG +L +LA ATG+S L Q+ER + P+V L I+T L V + F Sbjct: 12 IIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINWF 71 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE-STPHEKGVIEHV 125 P +V DP+ +V +++ +SG E +P+ G +E + Sbjct: 72 FPDPD----TVSDPEADLVVRAD----------RRRTLRFSSGVRDELISPNLSGQLELI 117 Query: 126 V-----------------------VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNG 162 V +++GQL++ V TL G+ V+FA+ + H Y N Sbjct: 118 VTTFDPGAGSGAELYAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNP 177 Query: 163 G 163 G Sbjct: 178 G 178 >UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ Length = 203 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 15/163 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++++R + G +L LA+ +G+S L Q+ER++++P++ TL +A L V FIS P+ Sbjct: 26 IREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVFISTPK 85 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH-----EKGVIEHV- 125 A + ++ + V+ D L +E S + G +S H + HV Sbjct: 86 PADSVTREGERPSFVLA-----DSSLQYERISTVLPGGTLSSLIVHIPVGYASEITAHVG 140 Query: 126 ----VVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 VV+DG + + L+ G+ + F D H + N G+ Sbjct: 141 EELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGD 183 >UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Proteobacteria RepID=Q12BT0_POLSJ Length = 207 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 12/177 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ ++ LR R SL LA GVS++M+ IER ESSPT L K+ATGLNVP ++ Sbjct: 20 IAQRVRDLRAARSLSLDALATHCGVSRSMISLIERGESSPTAVLLEKLATGLNVPLASLF 79 Query: 68 SPPQ---------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA--ISESTP 116 PQ + PS DP V ++ P + + + A E+ Sbjct: 80 EAPQPTKDPVARLADQPSWRDP-HSGYVRRNVSPSGVASPIQIVEVSFPAKARVAYETGA 138 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E + + V V++G +++ V + L G+ + D Y N +T + +I Sbjct: 139 REAQIHQQVWVLEGSIEVTVGDDQHRLGTGDCLALVLDRPVSYHNPTRKTARYAVVI 195 >UniRef50_A6G914 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G914_9DELT Length = 199 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 15/185 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + + ++ RQ G SL LA+A+GVS ML ++ER +PTV ++IA L Sbjct: 1 MHDPSSSIGKNIRSRRQALGLSLDALAQASGVSSTMLSEVERARKNPTVKLAYQIARALG 60 Query: 61 VPFSTFISPPQSATPSV---------YDPQQQAM---VITSLFPYDPQLCFEHFSIQMAS 108 + + + S+ DP Q + + +SL + +L + +S Sbjct: 61 CSLTDLLEDSPAVEVSIVRADQRRTLVDPDTQVVRHGLRSSLLDRNLELAWYELPAGESS 120 Query: 109 GAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 G + + P G++E V++G +++ + G L G+ + + T YRN G++ Sbjct: 121 GEMGANLP---GMVELATVVEGSVEVVLGGRSFELELGDSITYGPQSTTEYRNPGDEPAQ 177 Query: 169 FHSLI 173 LI Sbjct: 178 ILLLI 182 >UniRef50_B2TDB5 Transcriptional regulator, XRE family n=5 Tax=Bacteria RepID=B2TDB5_BURPP Length = 190 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 11/156 (7%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R ++ L+ LR +R WSL LA+ +GVS+A L ++E SPT L K+ +P S Sbjct: 13 RRIAQRLRALRAERNWSLDELAKLSGVSRATLSRLENAAVSPTANVLGKLCVAYGLPMSR 72 Query: 66 FI-------SP--PQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA-ISEST 115 + +P P++A P ++ S+ P L E ++ +G I+ Sbjct: 73 LMHMVEEDFAPLVPRAAQP-LWTDASVGFRRRSVSPPAQALSGEALECELDAGVQIAYDA 131 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRF 151 G+ H++++DG+L + VDG+ L G+ +R+ Sbjct: 132 SPRPGLEHHLILLDGELQITVDGQSHGLQPGDCLRY 167 >UniRef50_A4FBL3 Transcriptional regulator, Cro/CI family n=2 Tax=Actinomycetales RepID=A4FBL3_SACEN Length = 194 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 8/179 (4%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R ++ ++ R + G SL L VSK L +E + +P +ATL ++A L V S Sbjct: 9 RTVAHNVRAARVRAGLSLEELGRRAQVSKGALVALENAQGNPNLATLVRLADTLGVSVSA 68 Query: 66 FISPPQSATPSVYDPQQQAMVITSLFPYDPQLCF--------EHFSIQMASGAISESTPH 117 + P V A + T + +L E + ++ S PH Sbjct: 69 LMQGPPEGRVRVVAADAVAPLWTGERGGEARLVLTTSGSAPVEVWRWRLEPDEEYPSHPH 128 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + GV+E V V G++ L VDG + + G+ F D H YR G +T H +H P Sbjct: 129 QAGVVETVSVTSGRMVLVVDGVERVVEAGQTATFDGDAPHAYRGSGTETCHLIMTVHLP 187 >UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae RepID=A6UHX0_SINMW Length = 193 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 12/166 (7%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS-PP 70 +K LR ++ L +LA TG+S AML +IER + PT+ TL +IA V F + Sbjct: 19 IKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHFFNVDK 78 Query: 71 QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE-----------STPHEK 119 + ++ +Q+ + + P FE + + S PH+ Sbjct: 79 EEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDSPPSEPHQH 138 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 G E + V+ G+L + V+G+ L+ G+ V F + V H YR+ G++ Sbjct: 139 GSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKE 184 >UniRef50_A4FEP7 Transcriptional regulator, XRE family n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FEP7_SACEN Length = 192 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L+ L+ LR++ G SLS +A +G++K L Q+E +PT+ T++ ++ L+VP S+ Sbjct: 1 MLAANLRALRERAGLSLSEVARRSGIAKGTLSQLESGAGNPTIETVFSLSNALSVPVSSL 60 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQL---------CFEHFSIQMASGAISESTPH 117 ++ + P V + + + + S D ++ FE + ++ G + S H Sbjct: 61 LT--ERLDPEVVLVRSRGLEVLSSNAVDLRMLRRMDLTETVFELYDQRVRPGEVQRSEGH 118 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EHVVV G L + L G+ V F A HIY G V L+ YP Sbjct: 119 PGR--EHVVVTSGVLRVGPPDSPFELEAGDYVCFPARQPHIYETVGGPVVSVL-LLEYP 174 >UniRef50_UPI0001C30F4B transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F4B Length = 201 Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+ T++ R+QRGWS +L+ G+SK L +ER E++P ++TL +I L++ + + Sbjct: 10 LARTVRAARRQRGWSQDQLSAHAGISKGALVALERAETNPNLSTLCRIGDALDLNAAQLL 69 Query: 68 SPPQSATPSVYDPQQ-----------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + + D + A V+ P E + ++ +G E+ P Sbjct: 70 EQRPTNGLRIVDAAEVAPLWRGPAGGTAAVVLVTGGTAP---VELWRWRLPAGEFYENVP 126 Query: 117 HEK--GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 + GV++ V V+ G L L +DG L G F A H +R G H Sbjct: 127 YPDGAGVVKTVTVVAGTLRLTLDGAGHDLRRGATATFDASAAHAFRGSGRGGCELLVTTH 186 Query: 175 YP 176 P Sbjct: 187 LP 188 >UniRef50_A6BK54 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BK54_9FIRM Length = 149 Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 7/147 (4%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFIS-PPQ---SATPSVYDP---QQQAMVIT 88 ML Q+ER E +PT++T++K+A GL VP + F + PQ DP + Sbjct: 1 MLSQLERGEVNPTISTVYKLALGLKVPVTAFTADKPQPFFGTGKKEVDPLAGDDGRYRLY 60 Query: 89 SLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEG 148 +F + FE F ++ G + ++ G E + V G+L L L G+ Sbjct: 61 PIFSFREGQDFEIFDLEFDEGGMMQANRQMNGTREFITVYSGELTLIFKDHEYVLKAGDA 120 Query: 149 VRFAADVTHIYRNGGEQTVHFHSLIHY 175 + A ++Y+N G+ V + ++HY Sbjct: 121 ASYNAFDDYVYKNTGKGMVTANIVVHY 147 >UniRef50_C6XRL5 Transcriptional regulator, XRE family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRL5_HIRBI Length = 194 Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 15/174 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKI--ATGLNVP--- 62 L+ LK+LR ++ WSL +LAE +G+S+ L ++E+ E SPT L K+ A GL + Sbjct: 19 LAQRLKELRAEQNWSLDQLAEISGISRGTLFRLEKGEVSPTAHVLGKLCPAYGLTMSRLM 78 Query: 63 ------FSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA-ISEST 115 FS I P+ YD + S+ P L E ++ +GA IS Sbjct: 79 AMVETQFSALI--PRGEQKIWYDA-DYSFKRKSVSPPSTNLSGEVIECELIAGASISYDK 135 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 P +G+ H+++ GQL + VD +L G+ +R+ + ++ + T + Sbjct: 136 PPRRGLEHHLIMQAGQLQVTVDNAKYSLKTGDCLRYQLTGSSHFKANSDATAQY 189 >UniRef50_Q39D54 Transcriptional regulator, XRE family n=59 Tax=Proteobacteria RepID=Q39D54_BURS3 Length = 233 Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 8/172 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++ L + + L +LR +R SL LA +GVS+AML QIE S P++ L KIA L Sbjct: 28 LDVLEQVVGVNLARLRAERQLSLDALARLSGVSRAMLAQIESARSVPSIKVLCKIAAALK 87 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAIS 112 V + F+ ++ + V++S L+P E +++A Sbjct: 88 VSVAAFLRRHAVNGFEHLAAERASRVVSSNGRFSARALYPEGEPAAAEFHELRIAPLHTE 147 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 G ++VV +G L++ V Q L G+ + F AD + RN G+ Sbjct: 148 PGARRAPGTTVNLVVSEGTLEVSVHERRQLLATGDAIVFDADQPYSLRNPGD 199 >UniRef50_Q11I99 Transcriptional regulator, XRE family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11I99_MESSB Length = 198 Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R L++ +++LR+ RG +L+ LA G S L Q+ER S P+VA L +A VP S Sbjct: 18 RLLASDIRRLRKARGLTLAGLASQLGRSVGWLSQVERGISLPSVADLRALANHFKVPVSF 77 Query: 66 FISPPQSATPSVYDPQQQAMVITS-----LFPYDPQLCFEHFSIQMA----------SGA 110 F+ TP+ D ++ +V+ + L P++ E S + +G Sbjct: 78 FL------TPAASDEKELQVVVRADKRRKLVSGQPRVLEELLSPNLGGRFEIICCEFAGN 131 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 P ++ E V+ G LD+ V G+W L+ G+ R + T +RN E+ Sbjct: 132 TPLPQPRKRAAEEAGYVVSGALDIEVTGKWYELSAGDSFRVRGE-TLRWRNPHEE 185 >UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rhizobiaceae RepID=A6UF59_SINMW Length = 197 Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 14/183 (7%) Query: 1 MENLARFLSTTL----KQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIA 56 MENL L + + LR + +L LA GVS+AM+ +IER E+SPT L ++ Sbjct: 6 MENLGSQLDEVVGMRVRALRAAQDLTLDDLANRAGVSRAMISRIERGEASPTAQLLARLC 65 Query: 57 TGLNVPFST-FISPPQSATPSVYDPQQQ-------AMVITSLFPYDPQLCFEHFSIQMAS 108 + L S F S A+P Q+ + S+ P + ++ Sbjct: 66 SALGTTLSALFASGVSEASPLARRQDQRLWRDPESGYLRRSVSPEGVGSPIDIVEVEFPP 125 Query: 109 GA--ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 GA + E P ++G+ +H+ + G+L+L ++ Q L G+ + + HI+ N E+ Sbjct: 126 GARVVFERQPMDRGITQHLWLFSGRLELTMESGQQLLEPGDCLFMGLEEAHIFHNPYEEA 185 Query: 167 VHF 169 H+ Sbjct: 186 AHY 188 >UniRef50_UPI0001B543C0 hypothetical protein SSPB78_17204 n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B543C0 Length = 167 Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 3/165 (1%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 +++LR+ R SLS LA +G+ KA L +E +PT+ TL+ + T L VP + ++PP Sbjct: 5 IRELREARALSLSALARRSGLGKATLSGLEAGTRNPTLETLYAVTTALGVPLTAALAPPG 64 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQ 131 +A + A ++ D + E + +++ +GA S H G EH+ V+ G Sbjct: 65 AAPGTASGAAVDARLLDRY--EDDEAVTETYRVRVRAGAAQHSAAHAPGTREHLTVLAGT 122 Query: 132 LDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + L G+ + ADV H+YR L+ YP Sbjct: 123 VLAGTATAPVRLAPGDAHTWPADVPHLYRATAADAEAI-LLVRYP 166 >UniRef50_A3K855 Putative DNA-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K855_9RHOB Length = 162 Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 9/157 (5%) Query: 22 SLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSA-------- 73 +L+ L +GVS+A L +IE+ E+SPT TL K+AT VP S I+P Sbjct: 2 TLNDLEARSGVSRATLSRIEKAEASPTAETLGKLATAFAVPISRLIAPLDDVFVPLISGD 61 Query: 74 TPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMA-SGAISESTPHEKGVIEHVVVIDGQL 132 +V+ ++ + P L FE + S IS +P G H+V++DG+L Sbjct: 62 MQTVWTDEEAGFTRRVVSPRTGTLSFEVIEGTLRPSARISYDSPSVAGQEHHLVLLDGRL 121 Query: 133 DLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 L V + L + +R+A ++ GG+ +F Sbjct: 122 RLTVGEDVHDLRPKDCLRYALYGATLFEAGGDGARYF 158 >UniRef50_B4SZY7 Transcriptional regulator, XRE family n=57 Tax=Bacteria RepID=B4SZY7_SALNS Length = 182 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 7/161 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ +L + RQ+ G SL+ +A G++K+ L Q+E +P++ TLW + L++PF+ Sbjct: 7 VIARSLVRERQRTGLSLAEIARRAGIAKSTLSQLEAGNGNPSLETLWSLCVALDIPFARL 66 Query: 67 ISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISESTPHEK 119 + P T + + +V L P + + + GA S PH Sbjct: 67 LEPQVQKTQVIRRGEGTKVVAEQAHYQAILLAACPPGARRDIYLLLTQPGADRISHPHPP 126 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 G +EH++V G+ + + + L G+ + + D HI++ Sbjct: 127 GSVEHIIVTQGKALVGLTEAPEELAEGDYICYPGDQAHIFK 167 >UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2 Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ Length = 182 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 21/166 (12%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L L+ LKQLR RGWSL +LA+ +GVS++ L +IE E SPT TL +++ Sbjct: 1 MDTLNDRLADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQ 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA---------- 110 + S ++P ++ + ++Q+ D + F + +G Sbjct: 61 MTISQLLAPVEAPFQPLVRAEEQSTW------RDDENGFSRRVVSPPAGGLSAEVIRCTL 114 Query: 111 -----ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRF 151 IS + P + G H+V+++G L + + E L G+ +R+ Sbjct: 115 EPYQIISYAGPSKPGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRY 160 >UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rhizobium RepID=B5ZXQ7_RHILW Length = 189 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L + + +++LR +G +L LA A+GVS+AM+ +IER E+SPT + L +I L + Sbjct: 3 EQLEQAIGIRIRKLRLDKGLTLDDLATASGVSRAMISRIERAEASPTASLLARICAALGL 62 Query: 62 PFSTFISPP-QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFS--------------IQM 106 S F + + A P +QQ DP+ + S ++ Sbjct: 63 SLSAFFAEEGEQAAPLARRQEQQVW-------RDPETGYLRRSVSAPGTASDVDIVEVEF 115 Query: 107 ASGAISESTPHEK--GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 +GA PH G+ +H+ + DG+L++ L G+ + H++ N G Sbjct: 116 PAGARVSFPPHAASHGMTQHIWLFDGELEMTAGEAVYRLRPGDCLFMPVGEGHVFHNPGN 175 Query: 165 QTVHF 169 + Sbjct: 176 APARY 180 >UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzia RepID=B9R695_9RHOB Length = 183 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 21/177 (11%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+ L LR+ +G SL LAE +G+S+A L +IER ++SPT A L ++AT V + Sbjct: 6 LAQRLIGLRKTKGLSLDELAEKSGISRATLSRIERGDTSPTAAALGRLATAFGVSVADLF 65 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMA----SGAISESTPHEKGVIE 123 +A + +QA+ DP+ F+ S+ A G++ E T +I Sbjct: 66 GLGAAAHDAKLAQNEQAVW------RDPETGFQRRSVSPAISGFRGSVIEGTLPAGAIIS 119 Query: 124 -----------HVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 H+V++ G L + + L+ G+ +RF + + Y G + + Sbjct: 120 YAAPPLPDLEHHLVLLSGALTVVLGDTRHDLSPGDCLRFRLNTPNAYHATGSKPARY 176 >UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter RepID=C6E5F4_GEOSM Length = 199 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 16/173 (9%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++ LRQ++ +L LA+ TG+SK +L QIE ++ +P +ATL KIA GL V F Sbjct: 14 LGEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIHYFF 73 Query: 68 ----------------SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 SP S + Q + L P Q E F I+ A Sbjct: 74 EEAGDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEFEQRAW 133 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 S + +E V ++DG+L+ E L G+ + + + H Y + GE Sbjct: 134 DNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGE 186 >UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZY56_OPITP Length = 204 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 10/171 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ ++ ++ + R ++ SL LA + VSK ML QIE+ + +PT+A + KIATGL V Sbjct: 21 EHSSQIIAKKILTERHRQKLSLGDLAVRSDVSKGMLSQIEQGKRNPTIAVMSKIATGLRV 80 Query: 62 PFSTFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGAISE 113 P + + V + + + +L P D + E + + + Sbjct: 81 PLARLLPDDGPRVWRVIRANDENHILFDNDEHQLRTLSPIDLEKQVEFYELILHPHGKLV 140 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQT-LNCGEGVRFAADVTHIYRNGG 163 S PH +G E + V G + + GE +T L G+ +AADV H N G Sbjct: 141 SDPHARGAEEILTVAKGHVQVK-SGEKETELRRGDSAYYAADVPHAIVNLG 190 >UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales RepID=UPI0001B554B1 Length = 210 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 17/171 (9%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L LR + G ++S LA A GVS+ ++ QIER +P+ TL K+A L VP F Sbjct: 31 LGRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFF 90 Query: 68 SPPQSATPSVYDPQQ--QAMVITSLFPYDPQLCFE------HFSIQMASGAISES----- 114 + A ++P +A L D L +E H + M I Sbjct: 91 DGSEDA----WEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGRLGMMRAEIPPGYSNAL 146 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 PH E +++++G L + V G+ L G+ + + A V H + N G + Sbjct: 147 APHRHEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTR 197 >UniRef50_A6TPN0 Cupin 2, conserved barrel domain protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TPN0_ALKMQ Length = 131 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 1/100 (1%) Query: 76 SVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLC 135 S+Y+ + ++ +FP++P+ FE+F I++ GA STPH EH+VV +G L+L Sbjct: 33 SIYESNGKK-ILYDVFPFNPKSGFEYFHIKLIPGAKHVSTPHHNPTEEHIVVTEGTLELT 91 Query: 136 VDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 V+ + L +RF ++ H Y N + + F +++ Y Sbjct: 92 VEDQRFELTAPSALRFKSNKNHTYSNPYDIEMIFQNIVKY 131 >UniRef50_C2ASM9 Predicted transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ASM9_TSUPA Length = 171 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 3/148 (2%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L++LR +RG SLS LA GV K L +IE +PTV TL+ + L+VP + + Sbjct: 10 LRELRSERGLSLSELARRAGVGKGSLSEIEAGGRNPTVETLYSLCGPLDVPLTALLGESP 69 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQ 131 + + + ++ P+ + E F ++ + S H V EH+ ++DG Sbjct: 70 GTDSTAHGGMRTVLLSVRHLPH---VTVEVFRLEFPESSDHTSPGHGPAVREHLTLVDGA 126 Query: 132 LDLCVDGEWQTLNCGEGVRFAADVTHIY 159 L + G+ + G+ + +D H + Sbjct: 127 LLVGPVGDETVVRQGDSCIWTSDGPHRF 154 >UniRef50_B8FZM0 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM0_DESHD Length = 181 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 6/151 (3%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++ +R++R + ++LA+ +S + IERN SP++ATL +IA L+VP +F P Sbjct: 8 IRAIRKRRNLTTTQLADQLDLSNGYISLIERNIVSPSLATLKRIAQALSVPLESFFLDPD 67 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEH-----VV 126 + Y + + I + + +L +H + + +ST +K V H + Sbjct: 68 TEIIYSYLKKDEQQYIPAE-GRNWRLLIDHSKTNLMGAFVVDSTAVDKNVYSHQGVELIY 126 Query: 127 VIDGQLDLCVDGEWQTLNCGEGVRFAADVTH 157 V++G+ L + E L G+ + F A + H Sbjct: 127 VLEGETSLNISKEDYQLKAGDSLYFDASIMH 157 >UniRef50_B1MI43 Hypothetical transcriptional regulator n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MI43_MYCA9 Length = 185 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF--ISP 69 L++LR + G SL+ LA +GV K + ++E + + TL+ + L P S +SP Sbjct: 15 LRRLRTEAGLSLAELATRSGVGKGSISELENGRRTARLDTLFALTKALGAPLSAAVGVSP 74 Query: 70 PQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVID 129 P PSV+ A+ ++ D + +++ + S H GV E + V+ Sbjct: 75 PADG-PSVHGQAVHAVSLSGWQTDDGYVEVYRITVETTT---QHSPAHATGVRETITVVA 130 Query: 130 GQLDLCVDGEWQTLNCGEGVRFAADVTHIYR--NGGEQTVHFHSLIHYP 176 G L+ G+ Q GE + F +V H+YR NG + V +HYP Sbjct: 131 GTLEAGPLGDPQIAAAGETMCFPGNVPHVYRAVNGPAEAV---LTMHYP 176 >UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN Length = 169 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 11/156 (7%) Query: 22 SLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF-ISPPQSATPSVYDP 80 +L++LA + +S A++ QIER +++P+ TL ++A GL +P F + + A+P V Sbjct: 2 TLAQLAAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASPVVRSG 61 Query: 81 QQQAM----------VITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDG 130 ++ + + L + E I G + +TP G E +V+ G Sbjct: 62 DRRNLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMSG 121 Query: 131 QLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 ++D+ +DGE TL G+ + FA+ H Y N E++ Sbjct: 122 KIDVYLDGERHTLTAGDSITFASTTPHWYVNRYEES 157 >UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB Length = 204 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 22/176 (12%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + T +Q+RQ +G SL L+E +GVS + QIER+ ++P++ L I LNVP Sbjct: 16 IGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNVPMQVMF 75 Query: 68 --------------SPP----QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASG 109 PP + P + ++TS ++ Q+ SG Sbjct: 76 GDDSGTTADSDADGDPPFLRRAAKRPRIDLGSLHKELLTSGGNHNLQIMILTIEPGGTSG 135 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + S P EKG + V++G+L L VD L G+ F + H +RN G++ Sbjct: 136 NTTLSYPAEKGGL----VLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDR 187 >UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJV6_DESAH Length = 190 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 17/184 (9%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + +S +K+ R + +L LA+ TG++K L ++ER++ +P +TL KIA L V +T Sbjct: 4 KIISVNIKRFRTSKRLTLQELADRTGLTKGYLSKVERSQKAPPYSTLSKIAAALEVEITT 63 Query: 66 FIS----PPQSATPSVYDPQQQAMVI-TSLFP-YDPQLC--------FEHFSIQMASGAI 111 +S P++ + Q+ ++ T FP YD +L E F I A Sbjct: 64 LLSQGIDSPKNVPLCLSRKAQRTLIPGTEQFPGYDYELLAEKKPGKNMEPFIIH-APFEA 122 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + HE E + V+DGQL+ + L+ G+ V F + + H+ ++ G + Sbjct: 123 QRTYSHEGE--EFIYVMDGQLEFYYGDDTYHLDPGDNVYFDSVIPHVGKSMGHEKSKLLV 180 Query: 172 LIHY 175 +I++ Sbjct: 181 VIYF 184 >UniRef50_C7Q8B8 Transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=C7Q8B8_CATAD Length = 189 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 3/178 (1%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIER-NESSPTVATLWKIATGLNV 61 + A + +++LR +RG SLS LA V KA L +E + +PT+ TL+ IA L V Sbjct: 8 DFATQIGARIRRLRLERGVSLSALARDAAVGKATLSGLEDGSRGNPTIETLYAIAGRLGV 67 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPY--DPQLCFEHFSIQMASGAISESTPHEK 119 P + P + V SL D E F + + G S H Sbjct: 68 PIGALLPDPPHPGEKPLETIHGTAVSASLLETFSDADADTELFRLHIRPGHEQLSPAHPP 127 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 G +E++ V G + T+ G V + ADV H Y + V+ LI PR Sbjct: 128 GTVEYLTVFTGTARVGRPDALLTVPPGAHVSWTADVPHTYTAISDDDVYASLLIRTPR 185 >UniRef50_Q1R147 Transcriptional regulator, XRE family with cupin sensor protein n=24 Tax=Proteobacteria RepID=Q1R147_CHRSD Length = 190 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 11/170 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ +++LRQ S LAE GVS+ ML IE+ + + +++TL ++A L V F + Sbjct: 18 VAANVRRLRQGASLSQQALAERAGVSRRMLVNIEKGDVNVSLSTLDRLAEALGVLFYALV 77 Query: 68 SPPQSATPSVYD--------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 PP S + D P A ++ S P ++ E +S M G ES Sbjct: 78 QPPGSEDSARIDEVAWVGRFPDSHARLLASK-PARQEV--ELWSWSMEPGESYESVADGT 134 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 G E +VVI+G L L + T+ G+ + +D H YRN G + F Sbjct: 135 GWHEMLVVIEGTLTLELADHEVTIEAGDFHVYPSDQFHRYRNEGTGRLRF 184 >UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE71_DESAA Length = 527 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 5/174 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 T+K+LR+ W+ LA+ATG + + +E +E SP+V+ L ++A L + TF+ Sbjct: 354 FGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPGTFL 413 Query: 68 SPPQSAT-----PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 + + Y + Q+ L P F I + S + ++ Sbjct: 414 RDEEKSAIRDQRAKAYAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPVEYKHEGE 473 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+DG L+L +D L GE RF +++ H ++ + +++ P Sbjct: 474 EFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527 >UniRef50_A1SCT4 Helix-turn-helix domain protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SCT4_NOCSJ Length = 210 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 10/176 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 LS + +LR QRG SLS LA+ +GV+K L +ER +PT+ T++ ++ GL VP + Sbjct: 15 LSRAILRLRTQRGLSLSALADQSGVAKGTLSNLERGVGNPTLETIFALSRGLGVPIGELV 74 Query: 68 SPPQSATPSVY---DPQQQAMVITSLFPYD----PQLCFEHFSIQMASGAISESTPHEKG 120 S + A + D + V L YD E + + G S H Sbjct: 75 SSEEEAASTFVGRDDARHIRGVAVELMLYDRFASTGSATEIYDFRCLPGDRQVSRGHPG- 133 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 +EH+VV G+L + G+ V F + H Y ++ V +IHYP Sbjct: 134 -VEHIVVKQGRLLTGPTSSPIEVGPGDYVSFPSWGDHAY-EALDEVVEGFLVIHYP 187 >UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH Length = 181 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 12/163 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ ++ LR+++ +L L+E TG+S + L Q+E N SS + +L KIA LNVP + F Sbjct: 5 IAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFF 64 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK-------- 119 P+ V +++ + +L +F+ + A +I P EK Sbjct: 65 KSPELHKFLVKKQEREVFELEGSSSKFIRLS-GNFT-ERAMESILVVIPAEKQHGHKFSH 122 Query: 120 -GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 G E + V++G + +DGE +N G+ + F + + HI N Sbjct: 123 PGE-EFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSN 164 >UniRef50_C5CXI9 Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus S110 RepID=C5CXI9_VARPS Length = 195 Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 1/80 (1%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ L LRQ + SL+ LAE +GVSKAM+ ++ER ESSPT L ++A GL VP + Sbjct: 17 LIAARLLALRQAKALSLAELAELSGVSKAMISKVERAESSPTAVLLGRLAAGLGVPLAQL 76 Query: 67 ISPPQSATPSVYDPQQQAMV 86 ++ + A+P P+ + V Sbjct: 77 LT-EEKASPRRLRPRAEQEV 95 >UniRef50_A8M338 Transcriptional regulator, XRE family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M338_SALAI Length = 175 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 7/164 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + + +LR G SL+ LA A G+S+ L IE+ +PT++TLW +AT L VP + Sbjct: 1 MGSHVHRLRTAAGISLADLAAAGGISRTTLHGIEQGHGNPTLSTLWALATALRVPLGELL 60 Query: 68 SPPQSATPSVY----DPQQQAMVITSLFPYDPQL--CFEHFSIQMASGAISESTPHEKGV 121 P S T V P+ +++ + +L + + I +A S H GV Sbjct: 61 ETPNSTTDVVRADDDRPRIDGDAVSARLLHRIRLNGSLDVYDINVAQ-TTQYSPAHLPGV 119 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 E +V+ G + TL + +RF A+ H Y+ G+ Sbjct: 120 QECLVLTHGSITTGPTDAAVTLAEHDSIRFDANHRHQYQGHGQH 163 >UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVJ0_BEUC1 Length = 201 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 6/160 (3%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L+ LR+Q G +L +A TG+S A+L QIE + P++ +L K+A + +T Sbjct: 25 LGDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVATLF 84 Query: 68 SPPQSATPSVYDPQQQAMVI--TSLFPYDP----QLCFEHFSIQMASGAISESTPHEKGV 121 P + + + P ++ ++ L Y+ + E +A G +S P Sbjct: 85 HEPDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGDLEVLRSVLAPGDVSAEGPRGHAS 144 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 E V V+ G++ + + L GE F + H YRN Sbjct: 145 TECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRN 184 >UniRef50_UPI0001B560F6 putative transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B560F6 Length = 180 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 9/176 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 LA + T ++ LR + G L+ LA +G+ K L ++E +PT+ TL+ IAT L++P Sbjct: 12 LAAVVGTRIRTLRTRAGVGLTTLAADSGLGKGTLSELENGRRNPTLDTLFAIATALSIPL 71 Query: 64 STFISPPQSATPSVYDPQQQAMVITSLFPY-DPQLCFEHFSIQMASGAISESTPHEKGVI 122 S + V + ++ T L + DP+ E + + + + S PH GV Sbjct: 72 SDLL----FGDDGVAEAHGDSVTATLLGRWEDPEGVTEVYRLTIHE-RVQVSHPHSPGVR 126 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN-GGEQTVHFHSLIHYPR 177 E + V+ G ++ T++ F A+ H+YR GG T + YPR Sbjct: 127 EVLTVLTGTAEVGPVSAPVTVSAAGTHTFIAETEHVYRGIGGVATAVL--TMRYPR 180 >UniRef50_Q2KW20 Putative transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KW20_BORA1 Length = 177 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 9/173 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 +S +++LR +RG S + LA G+S+ M+ +E E++ ++A L IAT L+V F + Sbjct: 9 VSANVRRLRAERGLSQTALAARAGLSRRMIVGLESGEANISLAKLGLIATALDVNFIELV 68 Query: 68 SPPQSATPSVYD-----PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 S P TP P QA ++ S + E + +A G ++ P G Sbjct: 69 SSP-GQTPGALTWRGLHPGSQAHLVASA---PGKANTELWIWTLAPGERYQAEPDPPGWS 124 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + VI+G+L L +G + L G + + + Y N GE + F + Y Sbjct: 125 EILYVIEGELTLRYEGVTRLLAAGSATAYDSCADYAYLNEGETVLRFTRNVVY 177 >UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR92_9PROT Length = 190 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 21/159 (13%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ LK LR +RGWSL +LA + +S+A L ++E E SPT L K+ + S + Sbjct: 15 IAQRLKGLRAERGWSLDQLATRSAISRATLSRLENAEVSPTANVLGKLCAVYGLTMSRLM 74 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQ-----MASGA----------IS 112 + P++ + QA+ DP++ F S+ +A+ A I+ Sbjct: 75 HMVEGEFPALVRGEAQAVW------NDPEIGFRRRSVSPPAQTLAAEALECEIDPGTRIT 128 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRF 151 P G+ H+++++G+L + V G+ L+ G+ +R+ Sbjct: 129 YDEPPRPGLEHHLLMVNGKLAVTVGGQTYNLHPGDCLRY 167 >UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA Length = 210 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 9/170 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L T++ LRQ+ G S+ +A TG+S M+ Q+ER + P++ TL ++ L+VP S F Sbjct: 26 LGETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDVPISYFF 85 Query: 68 SPPQSATPSVYDPQQQAM---------VITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 Y ++ + V+ D + E + + + GA S + + Sbjct: 86 ETTDPGDVQRYIVRKNSRRLLRLTASGVVKEALTPDGKGQLELYELTLNPGASSGTDFLQ 145 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 + ++ G L L +D + L G+ RF + V H++ N +Q Sbjct: 146 HTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAAR 195 >UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Bacteria RepID=Q31LK1_SYNE7 Length = 230 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 14/167 (8%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L R+L T+++LRQ+ +++ +++ G+S+ ML +IE ++S ++ TL ++ + L V Sbjct: 21 LCRYLGNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSL 80 Query: 64 STFISPPQSATPSVY-DPQQQAMVIT----------SLFPYDP--QLCFEHFSIQMASGA 110 S ++++ V+ P+ A + L DP Q CFE F I + + Sbjct: 81 SALFKGYEASSEQVFLVPEGTAKEVVRRGTRNGHTYQLLASDPTAQFCFESFLITLHERS 140 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTH 157 + G E + V++G++ + L G+ + F +D+ H Sbjct: 141 EPFAAFEHPG-FESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPH 186 >UniRef50_B2JWV8 Transcriptional regulator, XRE family n=5 Tax=Bacteria RepID=B2JWV8_BURP8 Length = 189 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 20/183 (10%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++N+ + + ++ R+ RGWSL+ LAE +GVS+AM+ ++ER ESSPT + L K+A Sbjct: 5 IDNVDQRIGARIRAEREGRGWSLTSLAEKSGVSRAMVHKVERGESSPTASLLAKLAGAFG 64 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCF--EHFSIQMASG--------A 110 + S ++ + + +Q + + DPQ + H S + AS Sbjct: 65 MSMSALLALAELEDGRLLRRAEQPLWV------DPQSGYVRRHVSPKSASPLNLVEIDLP 118 Query: 111 ISESTPHEKGVIEH----VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 S P H + V+DG+L GE L G+ + +++N + Sbjct: 119 PSTEIPMPASAYLHSQQLIWVLDGELVFIEGGERHQLGAGDCLELGPPSDCVFKNESSRA 178 Query: 167 VHF 169 + Sbjct: 179 CKY 181 >UniRef50_Q12QC4 Transcriptional regulator n=2 Tax=Alteromonadales RepID=Q12QC4_SHEDO Length = 195 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 14/165 (8%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ ++ RQ SL LA+ +GVS++M+ QIE + SPT+ L K+A +++ F Sbjct: 15 YIGLFIRSFRQANHESLQSLADRSGVSRSMISQIESGQKSPTIMILAKLADAMSISLEDF 74 Query: 67 ISPPQSA-TPSVYDPQQQAMVITSLFPY-----------DPQLCFEHFSIQMASGAISES 114 I P+ T V P + +V S + P ++ + I+ +G S Sbjct: 75 IKVPKGLNTLEVLTPSESNIVSKSASAFVCHQLAARSSSSPADLYQFYFIK--AGKTQFS 132 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 + +++V V G+L L + + ++ G+ ++F A + H + Sbjct: 133 ANPKSTAVKYVWVEQGELSLYLSSKQVSVKAGQAIKFNASIPHRF 177 >UniRef50_A6V6S7 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=A6V6S7_PSEA7 Length = 183 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L ++ L LR +R +L++LAE + VSKAM+ +IERNESSPT + L ++A GL V Sbjct: 2 DLDELIARRLSTLRSERRLTLAQLAERSAVSKAMISRIERNESSPTASVLGRLAGGLGVT 61 Query: 63 FSTFISPPQS-ATPSVYDPQQQ 83 S + Q+ A P +Q+ Sbjct: 62 LSELLGNTQAPAAPLCRRDRQE 83 >UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5 Length = 208 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 13/171 (7%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 +FL T ++ LR++RG +LS LA+ + ++ + Q+ERN + P++ L+ IA L V Sbjct: 27 QFLGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQW 86 Query: 66 FISPPQSATPS----VYDPQQQAMV------ITSLFPYDPQLCFEHFSIQMASGAIS-ES 114 F + P V +Q+ V I L P E + G S ES Sbjct: 87 FFASETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKES 146 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 HE E V+ G +L V + L+ G+ F++ H Y N GE+ Sbjct: 147 YSHEGE--EAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEE 195 >UniRef50_A4AL40 Putative regulatory protein n=2 Tax=Actinobacteria (class) RepID=A4AL40_9ACTN Length = 195 Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L++ RQ + +L LA+ATG+SK+ L ++E + P++ L + L+VP ++ P+ Sbjct: 18 LRRARQNKNLTLDDLAQATGISKSTLSRLESGQRKPSLELLLPVVAALSVPLDQIVTSPR 77 Query: 72 SATPSVYDPQQQA--MVITSLFPY--DPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 A P V +A ++T L + PQ F I +A+ E T G E + V Sbjct: 78 IADPRVAQKSTRADGRMLTPLSQHLGKPQ----AFKITIAA-TDGEPTLRTHGGYEWIYV 132 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ++G+L L + + GE F H + + G V S+ Sbjct: 133 LEGRLRLVLGEHDIVMGTGEAAEFDTKNPHWFGSSGNGPVEILSM 177 >UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales RepID=Q39Q24_GEOMG Length = 198 Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 14/172 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L +++LRQ++ +L L+E +G+SK +L QIE ++ +P +ATL KI+ GL V F Sbjct: 15 LGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIHYFF 74 Query: 68 SPPQSATPSVYDPQQQ--------------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + V Q V SL P E F ++ + Sbjct: 75 EEEEDQQKLVLTRASQQTATRRRTGNDAPHGYVYRSLAPGIRHKPMEPFLVEFELTEWDD 134 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + + E + +++G+L+ + LN G+ + + + H Y + GEQ Sbjct: 135 AFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGYVSVGEQ 186 >UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGC0_BREBN Length = 185 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 7/160 (4%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++ +R++RG++L +A TG+SK +L Q+ER S P++ +LWKI L P F Sbjct: 12 IRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALESPIIHFFEDID 71 Query: 72 SATPSVYDPQQQAMVI-------TSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEH 124 V Q++ ++ SL +++ G ++ + E Sbjct: 72 QKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAKLGMLEVRLMPGEMAVDKFVQSEGEEC 131 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 VI G + + E L G+ + F + TH N GE Sbjct: 132 FTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGE 171 >UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=A1BAD5_PARDP Length = 213 Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 26/171 (15%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISP-- 69 LK+LR S +LAEA+GV + IE SSP+VA+L KI GL V S F P Sbjct: 31 LKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLGVTMSEFFEPDL 90 Query: 70 PQSATPSVYDPQQQAMVITSLFP-------------------YDPQLCFEHFSIQMASGA 110 PQS P + P + + + L+ ++ Q+ E + GA Sbjct: 91 PQSPQP-FFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILHERYE----PGA 145 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 + T E +V+ G+++L V + + L G+ FA+ H +RN Sbjct: 146 DTGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRN 196 >UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burnetii RepID=B6J765_COXB1 Length = 183 Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 13/178 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 F + LK+LRQ+R S+ LA+A GVSK+M+ +IE E PT+ K+A L S Sbjct: 3 FFAERLKRLRQERQMSMQALADAAGVSKSMICKIESTEVQPTLDVAGKLAVALGKTLSEM 62 Query: 67 ISPPQSATPSVYD--PQQQAMVITS-------LFPYDPQLCFEHFSIQMASGA--ISEST 115 + PQ TPSV ++QA+ I + + P E ++ GA T Sbjct: 63 LHSPQ--TPSVIQLTTEEQAIWIDAQNIKRRNISPILEGSKVEWLFVEFPPGASLTKPLT 120 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 P+ +++++ G L++ ++ +L G+ + + N + ++ LI Sbjct: 121 PYTPETEKYILITKGVLEVKINKTIYSLKKGDSLYYDGKCASELLNPSRKVTEYYVLI 178 >UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales RepID=B5EB42_GEOBB Length = 188 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 16/161 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 +K+LR R +L +A TG S A++ QIE + SP +ATL KIA +V + F S + Sbjct: 11 IKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFDVKLAQFFSEDE 70 Query: 72 -------------SATPSVYDPQ--QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + P V + +Q SL Y + F + + A +T Sbjct: 71 DNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVTLTEKAPEANTY 130 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTH 157 G E + V++G D ++ + TLN G+ + F + + H Sbjct: 131 SHDGE-EFIYVMNGTADFILEDQKITLNEGDSLYFESTLGH 170 >UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMM9_9RHOB Length = 219 Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 23/179 (12%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++ LR+ R +L LAEATG+S + QIER ++ P+V L++I+ L V S F Sbjct: 28 LGEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALGVSVSWFF 87 Query: 68 SPPQ---SATPSVYDPQQ----QAMVI----TSLFPYD---------PQLC--FEHFSIQ 105 P+ S P P Q +++++ YD P L E S + Sbjct: 88 PGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGKLELLSCR 147 Query: 106 MASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 A G+ ++ +G E +V+ G L+L V L G+ F + H YRN E Sbjct: 148 FAPGSGVDTVYAHEGE-EAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHRYRNPSE 205 >UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWQ8_9PROT Length = 195 Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 9/178 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ + LR + S +LA GVSK ++ QIE+ S+P +ATL ++A+ L V Sbjct: 12 VIARNVALLRHGQRLSYEQLARRAGVSKGVVVQIEQARSNPNIATLCRLASALGVAVVDL 71 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQLC--------FEHFSIQMASGAISESTPHE 118 ++ A V + ++ + +L E + + +G + H Sbjct: 72 LAEDSGAGVRVVRADEVPVLWSGPNGGTARLLAGTRGPDMLELWEWVLHAGERYDGAAHA 131 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 G E V V++G L + VDG+ L G+G+ FA D H Y + V F +H P Sbjct: 132 AGTREIVHVVEGVLAIEVDGQRIDLAAGDGMTFAGDRRHAYLAVSD-LVRFTMAVHEP 188 >UniRef50_A9ANZ3 Transcriptional regulator, XRE family n=31 Tax=Proteobacteria RepID=A9ANZ3_BURM1 Length = 200 Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 13/149 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF- 66 L+ ++ LR+ R +LS LAE G S L Q+ER S PTVA L I L VP + F Sbjct: 25 LAILIRDLRKHRKVTLSELAERIGRSVGFLSQVERGLSRPTVADLTAIGEALGVPTTYFY 84 Query: 67 -ISPPQSATPSVYDPQQQAMV-----ITSLFPYDPQLCFEHFSI---QMASGAISESTPH 117 +S P+S P V P ++ V IT + P + FSI +A GA S P Sbjct: 85 SLSKPRS-IPWVTRPDERRTVYYADGITDVL-VSPTMR-ARFSILESHLAPGASSGERPV 141 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCG 146 + + V++G+L + VDG+ + G Sbjct: 142 DDSDEQGGFVLEGELTIWVDGDDTPVTLG 170 >UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WPD8_BORBR Length = 201 Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 25/177 (14%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R + ++++R+++ SL LA +GV+ ML QIER+ +P++ TL +I L+VP S Sbjct: 7 RLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDVPLSA 66 Query: 66 FISPP------------------QSATPSVYDPQQQAMVITSLFPYDPQ-LCFEHFSIQM 106 ++ T V M L P Q L F +IQ Sbjct: 67 LFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPPAGQRLQFMVLNIQP 126 Query: 107 A--SGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 SGA S EKG + V+ G +L +DG+ L G+ +F H++RN Sbjct: 127 GGTSGAPPLSYAAEKGGM----VLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRN 179 >UniRef50_Q46QV6 Helix-turn-helix motif n=4 Tax=Proteobacteria RepID=Q46QV6_RALEJ Length = 188 Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 41/61 (67%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 +ST ++ R+ R WSL+ LAE +GVSKAM+ +IER E+SPT L K++ +P S + Sbjct: 12 ISTCVRVERESREWSLADLAERSGVSKAMISKIERGEASPTATVLGKLSGAFGLPLSMLL 71 Query: 68 S 68 + Sbjct: 72 A 72 >UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132 Tax=Proteobacteria RepID=A0KZV5_SHESA Length = 208 Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 21/175 (12%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M NL + +L+ +R+ +G S LA+ GV+ + + IE+N SP+V++L K+ +G+ Sbjct: 24 MRNLD--IGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIP 81 Query: 61 VPFSTFIS---PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP- 116 + F S +S VY + + T P + +L F A +SE+ P Sbjct: 82 MSLVDFFSIEASIESEQKVVYRSDELLDIGTG--PLEFKLIGRDFP-NRAMSVMSETYPP 138 Query: 117 ----------HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 HE E +VI+G+ +L V E L G+ F +++ H +RN Sbjct: 139 GSDTGEEMLKHEGE--EAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRN 191 >UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae RepID=A5IJD1_THEP1 Length = 188 Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 13/172 (7%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N R + L++LR +G + LAE T +S++ + Q+E +++SP++ TL +I L Sbjct: 11 NFVR-IGEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTD 69 Query: 63 FSTFIS---------PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 F S + P +P+ I D ++ + + + GA +E Sbjct: 70 LKHFFSDVEEERVVFKKEERVPVYDEPEGVKSEILMSGVEDKEI--DPILVTLEPGAQTE 127 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + +G E VI G++DL +D + L G+ + AD H +N G++ Sbjct: 128 EESYHEGS-EFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNSGKK 178 >UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K4_PELCD Length = 188 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 15/167 (8%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + LK R +G ++ L +GVS M+ +IER + P+V L K+A+ L + F Sbjct: 5 LIGKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSIGYF 64 Query: 67 ISPPQSATPSV------------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 + + ++ + Y +QQ +T DP H +++ S Sbjct: 65 VEEAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGL-QDPSFTVLHDTLE--KNCNSGD 121 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 P E V+V+ G+L+ + E L G+ + F A + H++RN Sbjct: 122 APMVHTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRN 168 >UniRef50_Q89VD2 Blr1115 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89VD2_BRAJA Length = 196 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 11/178 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + L R + LK LR Q G +L+ LA +GVS+AM+G++ER +SS T A L K+ L+V Sbjct: 7 QKLDRAIGRRLKTLRTQAGMTLNELAGRSGVSRAMIGRVERAQSSATAALLNKLCAALDV 66 Query: 62 PFSTFIS----PPQ-----SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA-I 111 S ++ PP+ + P DP P D E + + +GA + Sbjct: 67 TLSDVVALAEKPPERLMRLADQPHWRDP-DSGYRRRHASPPDAASGIEIIVVDLPAGARV 125 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 S S + +++++G + + +D + L G+ + F + N Q + Sbjct: 126 SYSPWGRNAFTQQLLMLEGAVCVHIDAKTVRLRDGDCLDFDVMRAVTFENETRQDARY 183 >UniRef50_A8GCS9 Transcriptional regulator, XRE family n=2 Tax=Gammaproteobacteria RepID=A8GCS9_SERP5 Length = 191 Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 11/172 (6%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 ++LS+ L+ RQQ G S LAE + VS+ ML IE + + ++A L K+A LN+ F+ Sbjct: 17 QYLSSNLRGYRQQAGLSQVALAEKSDVSRRMLAGIEAGDRNVSLAVLDKLADALNISFTD 76 Query: 66 FISPPQSATPSV--------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 I P++ + P QA+ S+ P ++ E + + G +S P Sbjct: 77 LIQAPETRGSHLVGELAWQGVQPASQALFAASV-PARQRV--ELWEWTLMPGEHYDSVPD 133 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 +G E + VI G L L ++ + TL G+ F +D + Y N EQ + F Sbjct: 134 AEGWSEIIYVIAGSLTLLLEQQTLTLEAGQTQVFNSDQHYAYANRSEQPLRF 185 >UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=Deltaproteobacteria RepID=A0LGL4_SYNFM Length = 209 Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 37/183 (20%), Positives = 82/183 (44%), Gaps = 14/183 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + T +++ R+Q+ ++S LA TG+ +A L +E + P++ L KIA L + TF+ Sbjct: 26 IGTRVRKYREQKSLTVSELASRTGLDEAFLEAVEEHNVYPSLGPLLKIARALGLRLGTFL 85 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASG---------AISESTPHE 118 + P + ++ ++ L D + S+ G I + + Sbjct: 86 DDQEVGDPLIVRVGERKEELSMLKGKDKPVTLRFHSLGRGKGDRHMEPFYIEILPESARD 145 Query: 119 KGVIEH-----VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 K + H +VV+ G++++ E L G+ + + + V H + G + ++++ Sbjct: 146 KKLSAHEGEEFIVVLSGEVEVIYGQETHVLKAGDSIYYNSVVPHYVSSIGSRKAEIYAVL 205 Query: 174 HYP 176 ++P Sbjct: 206 YFP 208 >UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHE5_SYNFM Length = 204 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 19/176 (10%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF- 66 + +++LRQ+ +L LA TG+SK L QIE N+ P VATL+++A L V F Sbjct: 18 IGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALGHFF 77 Query: 67 ----------ISPPQSATPSVYDPQQQA----MVITSLFPYDPQLCFEHFSIQMASGAIS 112 I+ + P Q+ + T+L E F ++ + Sbjct: 78 QESVEDDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEFPTQEKE 137 Query: 113 EST--PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 E HE E + V++GQ++ +TL+ G+ + ++++H +R G +T Sbjct: 138 EMVFLSHEGE--EFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNET 191 >UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XR14_CLODC Length = 181 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 20/177 (11%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP-FSTF 66 L + ++R+++ S+ LA+ V+ ++L QIER ++P+V +L IA+ LNVP F+ F Sbjct: 6 LGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLNVPLFTFF 65 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASG----AISESTPHEKGVI 122 +S V ++ +++ P ++ +E I +SG AI + P+ I Sbjct: 66 VSEVDKKNLIVRHDNRKKVIL----PGSKEVIYEIL-IPDSSGNLEFAIMDLAPNTSSCI 120 Query: 123 EHVV--------VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN--GGEQTVHF 169 + + V++G++ L +D + TL+ G+ V+ H ++N E V F Sbjct: 121 DRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIF 177 >UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter sphaeroides RepID=B9KL60_RHOSK Length = 211 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 79/177 (44%), Gaps = 21/177 (11%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + L+Q+R+ SLS L+E +GVS L Q+ER P++ T+ +I+ L VP Sbjct: 2 NSNHLIGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVP 61 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITS-----LFPYDPQL-----------CFEHFSIQM 106 + P ++P+ M++ S L +P + + ++ M Sbjct: 62 PFWLLE-----MPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFDAMQLMTVVM 116 Query: 107 ASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 G+ S + + I+ ++ G L+L VDG L+ G+ F + + H + N G Sbjct: 117 EPGSKSGAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRG 173 >UniRef50_B6VJL5 DNA binding regulatory protein n=2 Tax=Actinomycetales RepID=B6VJL5_9NOCA Length = 197 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 13/169 (7%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + ++ +++ RQ+RG SL+ LA +G+SK L ++E+ +PTV TL + L+ Sbjct: 5 MSDTNQLVARNVRRYRQERGLSLAELARRSGLSKQTLSKVEQGVGNPTVETLALLGAALD 64 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFS--------IQMASGAIS 112 +P ++ + +P V+ ++ V T+ ++ E + +++ GA + Sbjct: 65 MPARRLLT--EWGSP-VFVQRRDEDVWTTEDGRSERILDEVYGSGYVRNHLVRLDRGATT 121 Query: 113 ESTPHEK--GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 + G + HV VI G L + TL G+ VRF DV ++Y Sbjct: 122 AGPDASEPPGTLHHVYVISGWLRTGPLTDPVTLEAGDFVRFPGDVPYVY 170 >UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM Length = 183 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 9/175 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME++ L ++ R + G SL LA+ +G++ +ML QIER+ +P++ TL IA L+ Sbjct: 1 MEDIN--LGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALD 58 Query: 61 VPFSTFISPPQSATPSVYDPQQQ-------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VP F + + + A + +L D + E + + G S Sbjct: 59 VPMFKFFKDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRGSIEFCMMSIPPGLTSG 118 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 P E E V+ G +++ V G L G+ +R H + N G V Sbjct: 119 RNPQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQ 173 >UniRef50_A7MK95 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK95_ENTS8 Length = 199 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +++L+ L+ LK R++ +L L++ GVSK ML ++E+ ++P++A L K+A L Sbjct: 8 VDSLSVALAQKLKAWRKEHKVTLDALSQRAGVSKGMLVELEKAAANPSIAILCKVAAALG 67 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLC--------FEHFSIQMASGAIS 112 + + + + + Q ++ T +L E + ++ G + Sbjct: 68 LSVADLLDVASQPAARLIEATQIPVLWTGDHGGTARLLAGTSGPNMVELWRWELQPGDVF 127 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S H +G E + V G L L V+ E +N G D H Y N ++T+ F Sbjct: 128 TSPGHPQGTSELLHVERGVLTLDVNDEVLKVNAGASAVARTDAPHRYANEQQETLIFTMT 187 Query: 173 IHYP 176 +H P Sbjct: 188 VHEP 191 >UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z3_MACCJ Length = 167 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 3/159 (1%) Query: 11 TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP 70 ++++R++R +L ++AE T +S L Q+E N+S T+AT+ IA L V S F Sbjct: 6 NIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQFFY-E 64 Query: 71 QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDG 130 ++ V + ++Q+ L YD F +++ G G E V + G Sbjct: 65 HASLMDVLNAKRQSFYYEQL-AYDKGSPFIPLKVKLKPGNTDLEYVQHDG-FEFVYCLKG 122 Query: 131 QLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 +L + +D L+ GE + + A+ H + N ++ V F Sbjct: 123 RLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEF 161 >UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7J9_9RHIZ Length = 205 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 15/171 (8%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L+ +R G L +A A S++ML ++E SP++ L +I LNV S Sbjct: 23 LIGARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNVNISGL 82 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFE-------HFSIQ-----MASGAISES 114 +P + + + ++++ S + P L E H +Q +A GA S+ Sbjct: 83 FAPVEETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPGAASDG 142 Query: 115 TPHEKGVIEHV-VVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 +G E V V++G L+L V + L G+ F + H YRN G+ Sbjct: 143 AIQHEG--EEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGK 191 >UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX2_9PROT Length = 192 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 25/183 (13%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME L + L+QLR++RG +L LA TG++K L +IE + P +ATL +IA + Sbjct: 1 MEEL---IGPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIG 57 Query: 61 VPFSTFISPPQSATP-----SVY--DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F Q A SV D Q+ A+ S F YD + + + + S A+ Sbjct: 58 CDMAYFFQSQQGADAFDDRVSVVRADEQRPAVRGGSSFGYD----YRNIAHTLRSKAMDS 113 Query: 114 ---STPHE---KGVIEH-----VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNG 162 + P E EH V V++G + + G TL G+ V F + + H ++ Sbjct: 114 FIFTFPAELQGDTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPHRGKSK 173 Query: 163 GEQ 165 G Q Sbjct: 174 GAQ 176 >UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A6284 Length = 177 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 8/165 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + ++ LR+Q +L A + G+SK L QIER + P++A+L IA L V F+ Sbjct: 1 MGNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFV 60 Query: 68 SPPQSATPSVY---DPQQQAMVITSLFPYDPQLC----FEHFSIQMASGAISESTPHEKG 120 P A + PQ A I L + ++ +G + G Sbjct: 61 GAPGDAPTACRCEAPPQPGAEAIAHALAQVSHLANGTKLDAMLFRIPAGQAALEVASHTG 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 E + V++G+++L +D L GE + + V H + N ++ Sbjct: 121 E-EFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAADE 164 >UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR Length = 182 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 K LR++ G S LA+ GV+ + QIE N SP+VA+L K+ + + + F + + Sbjct: 9 FKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSMAEFFAVDE 68 Query: 72 SATPSVYD-PQQQAMVITSLFPY--------DPQLCFEHFSIQMASGAISESTPHEKGVI 122 + QQQ + Y D Q+ ++ + E HE Sbjct: 69 PKPDQFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEMLAHEGQ-- 126 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 E V++ G+L+L VD E L+ G+ F + TH +RN Sbjct: 127 ECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRN 165 >UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UAQ2_METS4 Length = 207 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 9/151 (5%) Query: 20 GWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF-STFISPPQSATPSVY 78 G SL +A TG+S L Q+ER SSP++ L ++A L V S F + P A P V Sbjct: 38 GLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLASLFGAAPGPAEPIVT 97 Query: 79 DPQQQAMVITSLFPYDPQLC--------FEHFSIQMASGAISESTPHEKGVIEHVVVIDG 130 P ++A + QL F +++A GA + G E +V++G Sbjct: 98 RPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDEALTHGGEEAGLVLEG 157 Query: 131 QLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 +L L V+ +L G+ RFA+ H Y N Sbjct: 158 RLALWVEDAALSLAAGDSFRFASRRPHRYGN 188 >UniRef50_B9JGZ9 Transcriptional regulator protein n=13 Tax=Proteobacteria RepID=B9JGZ9_AGRRK Length = 200 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 45/68 (66%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++++ + + T ++ R+ RGWSL+ LAE + VS+AM+ +IER +SSPT L K++ Sbjct: 16 LDSVDKRIGTRIRIERESRGWSLTELAERSAVSRAMIHKIERGDSSPTATLLGKLSGAFG 75 Query: 61 VPFSTFIS 68 + ST ++ Sbjct: 76 LSMSTLMA 83 >UniRef50_B7GVK0 Helix-turn-helix family protein n=11 Tax=Acinetobacter RepID=B7GVK0_ACIB3 Length = 183 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 11/168 (6%) Query: 10 TTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISP 69 T ++ LR + S LA+ GVS+ + +E + + ++A L IA L V F T +S Sbjct: 13 TNIRSLRDEHSLSQQDLADRAGVSRRTIAALETGQVNISLAKLDAIAAVLGVDFRTIVSA 72 Query: 70 PQSATPSVYDP--------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 P+ ++ + + +A + S+ P Q+ +S+ + ++E+ +G Sbjct: 73 PELKEHALVNALAWQGQKEESKATFLASV-PSRSQVELWTWSLAVGESYVAEADA--EGW 129 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 E + V++G+L + +T+ G FA+ VT+ Y N G Q + F Sbjct: 130 QELIYVLEGELTIQFTDSSKTIAAGSSFIFASSVTYTYINSGSQVLKF 177 >UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12 Tax=Bacteria RepID=Q1AT52_RUBXD Length = 220 Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 40/199 (20%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N ++L +++ R ++G +LS ++ +SK+ML +IE ++SP++ T+ ++A L V Sbjct: 23 NPDQYLGNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVT 82 Query: 63 FSTFISPPQSATPSVYD-PQQQAMVITS------------------LFPYD--PQLCFEH 101 ST S YD P A ++ + L Y+ P+ FE Sbjct: 83 LSTMFSN--------YDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEP 134 Query: 102 FSIQMASGAISESTP-HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 F I + + SE+ P E IE + +++G+L L G+ + F D+ H Sbjct: 135 FLITIKNK--SETFPTFEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPH--- 189 Query: 161 NGGEQT----VHFHSLIHY 175 G EQ + F ++I+Y Sbjct: 190 -GPEQLIDVPIRFLAIINY 207 >UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T298_MYCVP Length = 180 Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 3/161 (1%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 +S L+ +RQ+RG +L LA TG++K+ L ++ER +S P++A KI+ L V + Sbjct: 1 MSGLLRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLF 60 Query: 68 S-PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV-IEHV 125 S P+ +T SV ++ L E + G + PH + E + Sbjct: 61 SDDPEVSTISVDRAAERGADRHHAVAAR-MLGKEMSPFVVRPGRTFTTHPHPTHLGQEFI 119 Query: 126 VVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 V G+++L DG L G+ F A H R GE Sbjct: 120 FVHSGRVELSHDGRIIALEAGDCAYFDASAPHKLRQIGEDA 160 >UniRef50_A9VF72 Transcriptional regulator, XRE family n=75 Tax=Firmicutes RepID=A9VF72_BACWK Length = 197 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 10/171 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP-FSTF 66 L T+ R++ ++ A+ G+S +++ QIER ++P++ L IA LNVP F+ F Sbjct: 17 LGQTVLSYRKKNNMTIREFADYAGISTSLISQIERGHANPSLNVLELIAKALNVPLFTLF 76 Query: 67 ISP--------PQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA-ISESTPH 117 I+ + VY +V L P + E + + A +ES Sbjct: 77 INDIDTDSLISKKKDRKKVYRENNDHIVYDVLTPDFMKARIEMLMMDLNGYANTTESHYS 136 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 + E VV+ G++ + ++G L G+ VR +V H + N ++ H Sbjct: 137 HEDKEEIAVVMKGEVYVELEGNEYFLEEGDVVRIPPNVKHRFLNKSDEMNH 187 >UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Rhodobacteraceae RepID=A6DW64_9RHOB Length = 209 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L +++ RQ +L L+ GVS + L QIER+ + PT+ TL +IA L+V FI Sbjct: 14 LGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSIDHFI 73 Query: 68 SPPQ---SATPSVYDPQ----QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + P+ S T + PQ +++ + P F + + G SE+ H Sbjct: 74 ATPRQADSVTRAETRPQFSISGTSIIYEQIGAEFPGHELTSFILNVPPGYESETVQHSGE 133 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 E + V+DG++ V+G+ L G+ + + H + N E+ Sbjct: 134 --ELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSER 176 >UniRef50_D1SYA6 Transcriptional regulator, XRE family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SYA6_9BURK Length = 189 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 4/171 (2%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ F+S L++LR + G S LAEA G+S+ M+ +E +++ ++A+L ++A L V Sbjct: 13 NVLAFVSENLRRLRAEAGLSQLALAEAAGLSRRMISSLEAGDTNISLASLDRLAAALGVG 72 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITS---LFPYDPQLC-FEHFSIQMASGAISESTPHE 118 F +S P + + V + S L Y P + +S +A G Sbjct: 73 FVALVSDPSARSQRVDALAWKGKSKDSRGVLLGYVPATREAQLWSWALAPGETYHGQADP 132 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 G E V V+ G L L + E T+ G+ +++ ++ N G + + F Sbjct: 133 AGWHEMVFVVAGTLALRFEHEVVTVAAGDYCIYSSAQDYVCENAGTEMLRF 183 >UniRef50_C6Q242 Transcriptional regulator, XRE family n=2 Tax=Clostridium RepID=C6Q242_9CLOT Length = 71 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 43/62 (69%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++++RQ++G +L+ LA+ TG++ + L QIERN P++++L KI+ L VP TF Sbjct: 1 MLGPKIREIRQEKGLTLNELADKTGLTASYLSQIERNIIDPSLSSLRKISLSLEVPIYTF 60 Query: 67 IS 68 ++ Sbjct: 61 LT 62 >UniRef50_A8ZZ11 Helix-turn-helix domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZZ11_DESOH Length = 387 Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 44/66 (66%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 F+ +++LR+QRGW++SRLA G+++ LG+IER ++P+ A +++++ L V T Sbjct: 10 FIGRNIRKLRRQRGWTISRLAGEIGMAEIPLGRIERGGNAPSAAVIFQLSRALGVSVDTL 69 Query: 67 ISPPQS 72 + +S Sbjct: 70 FAEDES 75 >UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria RepID=Q1IRF9_ACIBL Length = 292 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 16/164 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIAT--GLNV-------- 61 L+ +R RG SL+++AEA G+S L IER+ S +VATL K+A LN+ Sbjct: 122 LRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDLFDQSG 181 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 + P + D + ++ +P L F + +G+ E HE Sbjct: 182 GRQYLVRPAERRQLDASDGVRMELLAWGNPVMEPHL----FHVAPGAGSGDEEYSHEGE- 236 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 E + V+ G L+L VDG+ L G+ F + H + N G + Sbjct: 237 -EFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSK 279 >UniRef50_A1AZ95 Transcriptional regulator, XRE family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AZ95_PARDP Length = 204 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 34/180 (18%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV-PFSTF 66 L L+ LR+++GWSL+R AE GV + L +IE + SPT+ L KI ++ P F Sbjct: 14 LPERLRALRERKGWSLNRAAEEVGVPPSTLSRIENRKMSPTLDLLLKIVRTFDMHPNDVF 73 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQL----------------CFEHFSIQMASGA 110 P QQ+ I+ DP L CF +I + Sbjct: 74 SGRPD---------QQEKQEISVSRASDPALIELPNLFYKHLHPDMECFNFRAILIT--L 122 Query: 111 ISESTPHEKGVIEH-----VVVIDGQLDLCVDGE-WQTLNCGEGVRFAADVTHIYRNGGE 164 + S G+ H V ++ G+L + ++G TL G+ + F + + H Y + G+ Sbjct: 123 FARSVEEYGGLTAHSGQEFVYLLSGKLQVHLEGHPLVTLAPGDSIMFTSSIPHAYVSAGD 182 >UniRef50_C9XPQ5 Putative transcriptional regulator (Putative uncharacterized protein) n=3 Tax=Clostridium difficile RepID=C9XPQ5_CLODC Length = 188 Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 16/174 (9%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++ +R+ + +LS +++ T +S + + QIER+ P++++L KIA L+ P F Sbjct: 1 MLGEKMRNIRKSKKKTLSDVSKLTDLSISYISQIERDAIEPSLSSLRKIAEVLDTPLYMF 60 Query: 67 ISPPQSATPSVYDPQQQAMV----------ITSLFP---YDPQLCFEHFSIQMASGAISE 113 + + V + + M+ I S P + P + F F ++ S + Sbjct: 61 MD-DNNTDDLVIRKEDRVMMKFPKSEMFYEIVSPMPTTEFTPSILFVEFELKPESEDAKD 119 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 H E +VV G +D+C+ + LN G+ A+V H N + T+ Sbjct: 120 YIYHASE--EIMVVTSGVVDICMGEKVVRLNPGDSTFIKANVPHKIINPSKDTI 171 >UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1 Length = 236 Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 14/171 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 + N L + ++ LRQ+ +L A A G+SK L Q+ER +SP++ +L IA L Sbjct: 53 LANAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALG 112 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVI---TSLF------PYDPQLCFEHFSIQMASG-A 110 V F+ P Q + +LF P QL E ++M G Sbjct: 113 VTVQYFVETPSEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQL--EAILVRMPPGQK 170 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 SE T H E + VI+G++ L ++G+ L+ G+ + + V H + N Sbjct: 171 RSEVTTHAGE--EFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVN 219 >UniRef50_D1VIB7 Transcriptional regulator, XRE family n=1 Tax=Frankia sp. EuI1c RepID=D1VIB7_9ACTO Length = 203 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 45/71 (63%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + L L+ T++ R RG +++ LA+A+GVS+AM+ ++ER E+ PT A L K++ L + Sbjct: 3 DTLGAALAATVRSARAARGLTVAGLADASGVSRAMISKVERAEAQPTAALLAKLSGALGL 62 Query: 62 PFSTFISPPQS 72 S I+ +S Sbjct: 63 TLSELIARAES 73 >UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2 Length = 184 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 14/157 (8%) Query: 16 RQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATP 75 R+ G + RLAE ++ +ML QIE+ ++P++ TL I+ LN+P F S Sbjct: 14 RKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALNIPLFNFFLEDTSTEE 73 Query: 76 SVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASG---AISESTPHEKGVIEHVV------ 126 V Q+ + FP + +E S + A+ P +E V Sbjct: 74 LVVRANQRKKIT---FPESGNVSYELLSPNLDGSLELALMNLLPQTASSMEPVAHKGEEI 130 Query: 127 --VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 +++GQ+ L ++ E LN G+ V+ H + N Sbjct: 131 AFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWEN 167 >UniRef50_A8I731 Helix-turn-helix XRE-family like protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I731_AZOC5 Length = 231 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 10/166 (6%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R +++++ R RG SL R+A+A G+S +L Q+ER SSP+V L I L V + Sbjct: 49 RAFGSSIREARLARGLSLQRVADAAGLSVGLLSQVERGISSPSVRVLRAICGALGVTVQS 108 Query: 66 FI---SPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISEST 115 P S + V P Q+ ++ + I +A G S Sbjct: 109 LFGEDGAPLSESRHVMRPYQRRRLDLGAKGIVKEFLSRSDLSTLQIMEIILAPGGSSGEE 168 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 + E VV++G ++L +DG L G+ F + + H +RN Sbjct: 169 AYNHIGEEGGVVVEGAMELVIDGTVHRLMQGDSFAFESALPHKFRN 214 >UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14 Length = 203 Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 17/173 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV---PFSTFIS 68 LK +R+ S LA +GV+ A + IE+N SP++++L K+ G+ + F TF Sbjct: 28 LKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLADFFTFDQ 87 Query: 69 PP--------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP--HE 118 PP P + + +++ + P Q+ F Q A GA S P H Sbjct: 88 PPGQDQYVFRAGDQPDLGRNGVRLLLVGATLP-SRQMRF--LREQYAPGADSGEEPIVHS 144 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 +G E +V G ++L +DG+ L G+G F + H +RN G+ S Sbjct: 145 EGE-ECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIIS 196 >UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IAI3_9BACI Length = 188 Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 11/158 (6%) Query: 15 LRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSAT 74 +R++RG SL L+ + VS +ML QIER +PT+ +IA LN S + ++ Sbjct: 10 IRKKRGMSLQELSALSKVSTSMLSQIERGGKNPTITVACQIAEALNTTLSALLDSQETRE 69 Query: 75 PSVYDPQQQAMVITSLFPYDPQL---CFEHFSIQMASGAI---SEST---PHEKGVIEHV 125 V +++ + + L F I+ I SES H+ GV E++ Sbjct: 70 IVVIRKEKRPVYFDESSGFQRHLLSPSFPSRGIEFVKNVIPPLSESGIFPAHKSGVKEYI 129 Query: 126 VVIDGQL--DLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 V G L +L + LN G+ F A+ H + N Sbjct: 130 YVEKGSLNVELSKGAYKEQLNEGDSFFFEANTEHRFIN 167 >UniRef50_A4FH89 HTH transcriptional regulator, XRE family, cupin domain n=2 Tax=Saccharopolyspora erythraea RepID=A4FH89_SACEN Length = 196 Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 19/179 (10%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 L + + L+ +R RG SLS +A + K L ++E + +PT+ TL+ +A L VP Sbjct: 2 ELVKVVGANLRAVRSVRGLSLSEVARRAAIGKGTLSELEAGQRNPTLETLYALAQVLEVP 61 Query: 63 FSTFISPPQSATPSVYDPQQQAMVIT-----SLFPYDPQLCF---------EHFSIQMAS 108 + ++A D +Q +V S D QL E + + + Sbjct: 62 LGELLVETEAA-----DGDRQVLVRAGGADLSGRTIDVQLMDRTAIGGFRQEIYRLYARA 116 Query: 109 GAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 G+ S H V+E ++V G L + + TL G+ +RF H+Y G V Sbjct: 117 GSRYVSPGHRPRVVEQLLVHSGTLVAGPEQDPVTLGPGDYLRFDGGADHVYEAPGTDVV 175 >UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD Length = 197 Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 23/173 (13%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS-TF 66 L ++Q R+ +G +L+ L++ +G+S +L QIER SSP++ ++ +I T L VP S F Sbjct: 16 LGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPLSWLF 75 Query: 67 ISPPQSATPSVYDPQQQAMVIT-------SLFPY-------DPQLCFEH--FSIQMASGA 110 + P + +P ++ +V+ L Y P L E + + + G Sbjct: 76 DNGP------LENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGGEMQIYLVSIRPGG 129 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 S + E +V+ G L+L VD L G+ RF + + H + N G Sbjct: 130 QSGPETYTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPG 182 >UniRef50_UPI0001C31978 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31978 Length = 94 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 36/56 (64%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 +++LR +RG SLS L AT V + LG +ER E PT+ T+ ++A GL VP S + Sbjct: 20 VRELRGRRGMSLSELGRATLVHEGYLGAVERAEVEPTLRTMVRVAGGLGVPLSVLV 75 >UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=C9Y4D6_CROTZ Length = 199 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 8/184 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +++L+ L+ LK R++ +L L+ GVSK ML ++E+ ++P++A L KIA L Sbjct: 15 IDSLSVALAQRLKSWRKEHNVTLDTLSRRAGVSKGMLVELEKAAANPSIAILCKIAAALG 74 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLC--------FEHFSIQMASGAIS 112 + + + + + Q ++ T +L E + +M G Sbjct: 75 LSVADLLDVASQPAARLIEASQIPVLWTGDSGGTARLLAGTSGPSMVELWRWEMRPGERF 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S H +G E + V G L L V+ E +N G D H Y N + T+ F Sbjct: 135 TSPGHPQGTAELLHVEQGILTLSVNDERLHINAGASAVARTDAPHGYANEHQATLIFTMT 194 Query: 173 IHYP 176 ++ P Sbjct: 195 VYEP 198 >UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JI22_AGRRK Length = 204 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 16/165 (9%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++ LR +R SL+ LA TG+S L QIER SS V +W +A L+V S I Sbjct: 26 VRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDVEPSALIVDGG 85 Query: 72 SATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISES---TPHEKG 120 +Y + +A I+ P + + G +E+ T HE G Sbjct: 86 EPVNDLYCVRANSRRPLPVRAEGISKDLLSPPGAALTGMQVIVEPGGGTETYAHTGHEFG 145 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 V G+++L VD L G+ F + + H +RN G + Sbjct: 146 -----CVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTE 185 >UniRef50_B8FZM1 Transcriptional regulator, XRE family n=2 Tax=Desulfitobacterium hafniense RepID=B8FZM1_DESHD Length = 179 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 18/161 (11%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L + ++ +R+ + SL +AE T ++ + L QIERN +SP++ TL KIA+ L P S+F Sbjct: 4 LGSAIRFMRKNQKLSLKDVAEKTELTISHLSQIERNLASPSLITLEKIASALGYPISSFF 63 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSI-------QMASGAISESTPHEKG 120 PQ + + Q+ + I +P + F I Q+ + + E+ Sbjct: 64 VNPQFTSTHIPAEAQRTIQI------NPGMTLR-FLINNVGQRNQLGAYIAEVADLSEEI 116 Query: 121 VIEH----VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTH 157 +I H + V++G++ V + L G+ + F +V H Sbjct: 117 IIHHGTKLIYVLEGEMHFNVAQKEFYLTEGDSLFFNGNVPH 157 >UniRef50_A8FQX1 DNA-binding protein n=3 Tax=Alteromonadales RepID=A8FQX1_SHESH Length = 181 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 9/173 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 +A ++ +K+LR Q + LAE G+ +A L +E S+P+++ + K+A L V Sbjct: 1 MANPINEGIKRLRAQHKLTQIELAEMAGIPRATLANMEGANSNPSISVVMKVAQALGVTV 60 Query: 64 STFISPPQSATPSVYDPQQQAM--------VITSLFPYDPQLCFEHFSIQMASGAISEST 115 I+ QS + + + + + T P Q + + M G ++ Sbjct: 61 DDLITRRQSVHVTKVERKDMPVSHQHDGKFISTRTSPISTQ-NLQINDVIMMPGCNTKGV 119 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 PH +G E + ++G L V GE + G F + H Y N + VH Sbjct: 120 PHPEGSHELFLCLEGTATLEVQGEMFEIEAGNLTYFKGHLPHQYGNASLKPVH 172 >UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=Ochrobactrum RepID=A6X8F8_OCHA4 Length = 202 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 11/173 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N A + ++ RQ G +L L+E +G+S L QIER SPTV TL+ IA L++ Sbjct: 18 NDAGDIGARIRLRRQTLGLTLGYLSEVSGLSTGALSQIERGLVSPTVRTLYTIAEVLSMS 77 Query: 63 FSTFISP-----PQSATPSVYDPQQQAMVITS----LFPYDPQL--CFEHFSIQMASGAI 111 + I P A P V +Q V+ + P+L + F++++ G Sbjct: 78 PAQLIDPQGFAAAARANPYVLRAGEQPEVLNAGGVIKHRASPELIETMKSFAVRIIPGGS 137 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 S + E VI G L ++ L+ G+G + H + N GE Sbjct: 138 SGEECYTHSGEELGYVISGSFTLQIEDAQYLLSAGDGFALPSTTRHRFFNNGE 190 >UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes RepID=A4J4T3_DESRM Length = 180 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 8/161 (4%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++ LR Q+ +L L+E TG+S + L Q+ER SS + +L KIA LNV ++F + Sbjct: 8 VRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALNVHIASFFANYS 67 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLC-------FEHFSIQMASGAISESTPHEKGVIEH 124 + + +Q++ I +L E + A G + +T G E Sbjct: 68 NTNFTTRADEQKSFKIEGSSTEYIRLSGEFHGRNLEPLLVTFAPGQVQPNTFCHPGE-EF 126 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 V++G + VDG+ + G+ + F + + H + N +Q Sbjct: 127 YYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQ 167 >UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Acinetobacter RepID=B2HYY3_ACIBC Length = 197 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 12/181 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+++ ++ +++LR RG++L LA VS++ + IER E+SPT L K+A GL Sbjct: 1 MDDINIRIAHRIRELRLARGYTLDVLAARCQVSRSAISLIERGETSPTAVVLEKLANGLE 60 Query: 61 VPFSTFISPP---QSATPSVYDPQQQ-------AMVITSLFPYDPQLCFEHFSIQMA--S 108 VP + + S+ P + +Q + ++ P + +L F+ I+ S Sbjct: 61 VPLTQIFTNEAGNSSSQPLIRRNEQAEWRDPETGYIRRTVSPPNLKLPFQIVEIEFPPHS 120 Query: 109 GAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 E+ + V + + V++G++++ + L G+ + D IY N Q Sbjct: 121 RITYETNESSRVVQQQLWVVEGKIEIQLGETSYALGQGDCLAMQLDQPVIYSNHSAQVAR 180 Query: 169 F 169 + Sbjct: 181 Y 181 >UniRef50_C6D8D0 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8D0_PAESJ Length = 112 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 40/70 (57%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M ++R + ++ +R+Q+G+S +LA ++ + +GQ+ER E SPTV L KIA L Sbjct: 1 MNEISRNIGENIRAIRKQKGFSQEQLALRAEINGSYMGQVERGEKSPTVDVLSKIAHALQ 60 Query: 61 VPFSTFISPP 70 P + P Sbjct: 61 CPLEQLVHMP 70 >UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA Length = 224 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 28/174 (16%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ LK LR+Q+GW+L LAEA G++K+ L ++ER S P++A K++ L V Sbjct: 40 MTIRLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLF 99 Query: 68 SPPQ------------------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASG 109 S + +A+ Y+ + L P+ H S Sbjct: 100 SESRDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPF-----VVHPPRDYVSS 154 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 A E HE E + V G +++ E L G+ V F A + H R+ G Sbjct: 155 AFRE---HEGE--EMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPHRMRSVG 203 >UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4Z4_CLOK5 Length = 179 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 29/184 (15%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 +K+LR ++G +L ++E TG+S L Q ER ++ V L IAT LNV + F Sbjct: 7 VKELRNKKGLTLKTMSEKTGLSTGFLSQFERGITTIAVEHLSTIATVLNVRINYF----- 61 Query: 72 SATPSVYDPQQQAMVITSLF-PYDPQL---CFEHFS----IQMASGAISESTPHEKGVI- 122 +D +++ ++I S P+ Q+ ++ S +M S + E P ++ Sbjct: 62 ------FDDEEKELIIRSYDQPFVRQINKAIYKSLSRYPEDKMLSPELIELLPKDEHQYP 115 Query: 123 --------EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E + V++G L L +D L G+ + + H + N + V F + +H Sbjct: 116 DIYAHQGEEFIYVLEGILTLIIDENIFKLYPGDSAHYLSTQKHNWDNQTNKVVKFIT-VH 174 Query: 175 YPRS 178 YP S Sbjct: 175 YPSS 178 >UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K52_SYMTH Length = 196 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 5/163 (3%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++Q R Q+G +L LAE +G+SK L Q+E +++SP++ L +++ GL VP + + Sbjct: 10 LGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVALLL 69 Query: 68 SPPQSATPSVYDPQQQAMVITS-----LFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 + V +Q + P + +++A GA + H Sbjct: 70 ISQEERAHVVRANARQGYSMNGEGLSVQLLSAPGRSLKMMLLELAPGAATGGDNHVHEGE 129 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 E +V+ G + E LN G+ + + + H N G+Q Sbjct: 130 ECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQ 172 >UniRef50_Q6FBS7 Putative transcription regulator protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FBS7_ACIAD Length = 190 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 40/61 (65%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M ++ + LS +KQLR +RG++L LA + VS+AM+ IER ++PT L K+A L+ Sbjct: 1 MMDINQHLSQRIKQLRLERGYTLDELANRSHVSRAMISMIERATTNPTAVVLEKLAVALD 60 Query: 61 V 61 + Sbjct: 61 I 61 >UniRef50_A1UVQ7 DNA-binding protein n=35 Tax=Burkholderia RepID=A1UVQ7_BURMS Length = 94 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 43/75 (57%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M L + ++QLR+ R WS +LAE G++++ +G+IER + ++ T+ K+A Sbjct: 1 MTALVQRFGAAIRQLREARAWSQEQLAEHAGLNRSYVGEIERGTAIASIVTVDKLARAFG 60 Query: 61 VPFSTFISPPQSATP 75 VP + +SP A P Sbjct: 61 VPIARLLSPAGDAGP 75 >UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=Desulfobacteraceae RepID=B8FLW0_DESAA Length = 184 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 6/178 (3%) Query: 5 ARFLST--TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 A+ +ST + LR+ + L LA TG++ L +IE E+ P+V +L +IA L V Sbjct: 7 AKNISTGQRIHDLRKDKDMDLETLANETGLAVDTLEKIESGENMPSVGSLLQIARALEVD 66 Query: 63 FSTFISPPQSATP----SVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 + F+ T Y + T+L P + F I++ + ++ Sbjct: 67 SAFFLEKEVKTTKKGLAKAYSERTSHYAYTTLSPGARHKHMKAFKIEIPPKQEHDGVSYQ 126 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+ G++++ V L G + F + + H+ +N GE +++ P Sbjct: 127 HEGEEFVYVLSGKVEVTVGEHVNKLEEGGSLHFNSGLRHLLKNPGEDAALLLVVVYTP 184 >UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=A9ALB0_BURM1 Length = 193 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 12/163 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L + ++ LRQ+ +L A A G+SK L Q+ER +SP++ +L IA L V F+ Sbjct: 17 LGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYFV 76 Query: 68 SPPQSATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASG-AISESTPHE 118 P S SV +Q A + L E ++M G SE T H Sbjct: 77 DTP-SEERSVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVTTHA 135 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 E + V++G++ L ++G+ L G+ + + V H + N Sbjct: 136 GE--EFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWAN 176 >UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFC8_FUSMR Length = 187 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 9/177 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++ R + ++ L+E G++ +ML QIER+ +P++ATL I+ L+VP F Sbjct: 10 LGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKALDVPLFMFF 69 Query: 68 SPPQ--------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 ++ S+ P+ + L P D + E + + S + +E Sbjct: 70 KEENNEELVVRANSRKSIGLPENNEVRYELLTP-DTKGSIEFCMMNIPSYSFTEEIGQSH 128 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E ++ G++ + + LN G+ +R A H + N + V I+ P Sbjct: 129 SGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVKVIFAINPP 185 >UniRef50_C7MI31 Predicted transcriptional regulator n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MI31_BRAFD Length = 190 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 7/176 (3%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++ RQ+ S+ LAE + VS+ ML QIE +++P+VA L +IA GL F+ + Sbjct: 13 LGERIRAARQELELSVGALAERSDVSRRMLTQIELGQANPSVAILDRIAAGLGTTFAALM 72 Query: 68 -----SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 +PP D A+++ ++ D + E + ++ + E P Sbjct: 73 GVGADAPPDGVEIWSTDHGSWAVLLDAI--DDGGVSVETWKWKLVGEDVYEGAPGGAAGR 130 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 + VI+G L+ W+ + G R A YR F S+ PR+ Sbjct: 131 IMLHVIEGSLETEEGAPWRVIEAGGSHRSPAGGVRRYRARDGGVAVFLSVAVLPRA 186 >UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERF8_OCEIH Length = 189 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 31/173 (17%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +KQ+R + + ++A+ G+SK++L +IE +++ +ATL KI+ L VP + + Sbjct: 9 IGDKIKQVRLRNKKTQQQIADECGISKSLLSKIENGQTASAIATLSKISDALKVPLAWLL 68 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEH--FSIQMASG---------AISESTP 116 D ++Q +VI + ++ E +S ++ + I TP Sbjct: 69 D----------DKEEQDLVIQRKYNRPSKVGDESMGYSYELLANRSKYSGIEPTIVHVTP 118 Query: 117 HEKGV----------IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIY 159 + + E + +++G+++L +GE Q L G+ FA H++ Sbjct: 119 KHRNLRQDKTYTHSQDEFIYILEGEIELLYNGEKQFLEKGDSAYFAGSKPHLF 171 >UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enterobacteriaceae RepID=D1RT89_SEROD Length = 462 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 42/68 (61%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++N+ + + ++ R+ R WSLS LAE GVS+AM+ +IER +SSPT L +++ Sbjct: 278 LDNINQRIGARIRIEREARHWSLSDLAERAGVSRAMVHKIERGDSSPTAMLLARLSGAFG 337 Query: 61 VPFSTFIS 68 + S I+ Sbjct: 338 LSMSKLIA 345 >UniRef50_A8M439 Transcriptional regulator, XRE family n=2 Tax=Salinispora RepID=A8M439_SALAI Length = 219 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 7/150 (4%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L+ LR+ RG +L+ ++ TGVS++ L ++E + T+ L +A NVP + P+ Sbjct: 16 LRALRRHRGLTLADVSTTTGVSESTLSRLEGGQRRATLELLLPLARIYNVPLDDLVGAPR 75 Query: 72 SATPSVY-DPQQQ---AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 + P ++ P ++ A V S P Q F+ I A E TP E + V Sbjct: 76 TGDPRIHLTPIRRFGMAFVPLSRRPGGVQ-AFKM--IIPARREPLEPTPKTHDGFEWLYV 132 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTH 157 ++GQL L + TL+ GE F + H Sbjct: 133 LNGQLRLMLGERDLTLSPGEAAEFDTSLPH 162 >UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER Length = 196 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 30/173 (17%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF- 66 ++ L+ R++ G +L LAE TG++K+ L ++ER S+P++A KIA L+ Sbjct: 1 MAAFLRTHRRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLF 60 Query: 67 ------------------ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMAS 108 I P S SVYDP ++V ++ P F + AS Sbjct: 61 SDSMEGNAMTIVRAKDRVIDPANSVQSSVYDPIAPSLVGKAMQP---------FVVHPAS 111 Query: 109 GAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 + H E V V G ++ + G+ L+ G+ + F A+ H R+ Sbjct: 112 VMGPKFMDHTGE--EFVFVHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRS 162 >UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2V3_9SPHI Length = 194 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 15/174 (8%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+L + +K +R+++GW L A+ +G+S AML +IE PT+ +L +I LN+ Sbjct: 5 EHLTIQIGNKIKGIRKEKGWKLGEFADKSGMSIAMLSKIENGRVIPTIPSLMQIINTLNL 64 Query: 62 PFSTFISPPQ---SATPSVYDPQQQAMVIT---SLFPYDPQLCFEHFSIQMASGAISEST 115 + F S + ++ ++ + ++ Y Q+ +F I AS IS T Sbjct: 65 NLADFFSDLKVDGDFNGFIFRKKEDYVSLSKEEDSVGYHYQMIL-NFPIDKASMEISLLT 123 Query: 116 -----PHEK---GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN 161 EK E++ +I G+L + E + G+ + F ++ H+ +N Sbjct: 124 LDSHAQREKLSTSGFEYIYLIKGKLTYELGDETLEMEEGDSLFFDGEMPHVPKN 177 >UniRef50_A8MGA3 Transcriptional regulator, XRE family n=2 Tax=Clostridiaceae RepID=A8MGA3_ALKOO Length = 130 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 38/59 (64%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++ LR+++ +S+ + E TG+SK+ + +IE ++SSPT TL KIA L V TF Sbjct: 3 LGEKIRALRKEKRYSIMNIRELTGLSKSTISEIENDKSSPTAETLQKIANALEVTVDTF 61 >UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JV98_9RHOB Length = 195 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 12/160 (7%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 ++ LR ++ L++L T +S ML +IER + PT+ TL +IA V F Sbjct: 19 IRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGLEHFFEEGD 78 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE-----------STPHEKG 120 + T + +++ + + P FE + I S PHE Sbjct: 79 APTLEIVRSKER-LKMPDTMERMPSYYFESLDFPVNDRPIDSFLSEFVPRAKASEPHEHE 137 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 IE V VI G L++ + + L + + F A H Y+ Sbjct: 138 GIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYK 177 >UniRef50_Q1GGY8 Transcriptional regulator, XRE family n=22 Tax=Rhodobacterales RepID=Q1GGY8_SILST Length = 209 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L +++LR+QR W+L A G++++ L +IE + SPT L K+A GL + Sbjct: 27 LGARVRELRKQRDWTLEHAASQAGLARSTLSKIENGQMSPTYDALKKLAVGLQISVPQLF 86 Query: 68 SPPQ 71 +PPQ Sbjct: 87 TPPQ 90 >UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UFY6_METS4 Length = 201 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 13/169 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++ LR+ +G +L ++A GVS L QIERN S + L +IAT L V S F Sbjct: 21 LLGEQIRALRKIKGLTLQQIAGEIGVSIGYLSQIERNRSKLPIGVLKRIATILGVQLSWF 80 Query: 67 -----ISPPQSATPSVYDPQQQAMVITS------LFPYDPQLCFEHFSIQMASGAISEST 115 + PP+ V +++ M T L + E +A G+ S+ Sbjct: 81 FQPQTLGPPEEQDFIVRAGRRRRMSFTGTGIAEELLSPNLNGPLEVLLSTIAPGSDSDFY 140 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 H+ +E +V+ G LDL + L G+ F++ H N GE Sbjct: 141 SHDG--MEAGLVLAGTLDLWIGDRTFRLEVGDSFSFSSRERHRCANPGE 187 >UniRef50_A8W2R9 Putative transcriptional regulator, XRE family n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W2R9_9BACI Length = 195 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIER-NESSPTVATLWKIATGLNVPFST 65 L LK+LR++RG S+ +LAE +GVS++ L IE N S T+ TL K+A L+V + Sbjct: 1 MLKDNLKKLRKERGMSMRKLAELSGVSRSTLHDIENLNMKSTTLNTLEKLADALDVSVNY 60 Query: 66 FI 67 I Sbjct: 61 LI 62 >UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0D911_9RHOB Length = 205 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 17/171 (9%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L+ LR+ G SL L+ +S L QIER+ SSP+V TL K+AT +VP S F Sbjct: 25 LGLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLATSFDVPLSYFF 84 Query: 68 SPP----------QSATPSVYDPQQQAMVITSLFPY---DPQLCFEHFSIQMASGAISES 114 + P + T D Q + L P QL + + +SG E+ Sbjct: 85 ADPAADEVDGIVIRRDTGHEMDVSAQGIRKHLLTPKALDGLQLMMVRMTPESSSGP--EA 142 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 HE ++ V+ G + L V+G L G+ F + H + G Q Sbjct: 143 YGHEG--LDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRFECVGTQ 191 >UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepID=A0PPF1_MYCUA Length = 180 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 33/178 (18%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ L+ +R+QRG +L +LA+ G++K+ L +IER +S+P++A K+A L+V Sbjct: 1 MTALLRAVRRQRGLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLF 60 Query: 68 SP-----------------PQSATPSVYDPQQQAMVITSLF--PYDPQLCFEHFSIQMAS 108 S PQS V Q ++ P Q C Sbjct: 61 SDESAHETITADRAHDRLGPQSGRYHVLASTQLGKTMSPFVVRPTAGQDC---------- 110 Query: 109 GAISESTPH-EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + PH E E V V G ++L + TL G+ F A V H R G + Sbjct: 111 ---ASDGPHPEHTGQEFVFVHTGSVELDYGDQTITLGTGDSAYFDASVGHKLRAVGTE 165 >UniRef50_A3KBA7 Putative DNA-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3KBA7_9RHOB Length = 186 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%) Query: 20 GWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYD 79 GW+L +LA A+GVS+A L ++E E SP+ L++++ + S +S + + Sbjct: 21 GWTLDQLAAASGVSRAALSRLENAEVSPSADVLYRLSAAHEMTLSRLMSLMEDGFAAQVR 80 Query: 80 PQQQAMVITS--------LFPYDPQLCFEHFSIQMASGA-ISESTPHEKGVIEHVVVIDG 130 QA+ + P P L E ++ G + P G H+V++ G Sbjct: 81 RDDQALWRDGETGLSRRIVSPAAPALAGEVIECKITPGTHWVQEAPEVPGQEHHLVMLTG 140 Query: 131 QLDLCVDGEWQTLNCGEGVRF 151 + VDGE L G+ +R+ Sbjct: 141 YMHAVVDGEAHYLAPGDTLRY 161 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat... 268 4e-71 UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S... 243 3e-63 UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulat... 218 6e-56 UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid... 211 8e-54 UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi... 209 3e-53 UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria... 206 4e-52 UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacil... 201 1e-50 UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1... 201 1e-50 UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacill... 199 3e-50 UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph... 199 3e-50 UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD 198 8e-50 UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ... 197 1e-49 UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0... 196 2e-49 UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl... 195 6e-49 UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicu... 187 1e-46 UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin... 186 3e-46 UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me... 186 3e-46 UniRef50_B1HN87 Transcriptional regulator n=2 Tax=Bacillaceae Re... 185 7e-46 UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ... 184 8e-46 UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Pr... 184 1e-45 UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax... 183 3e-45 UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Ha... 182 5e-45 UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira Rep... 182 6e-45 UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clos... 181 1e-44 UniRef50_Q484W4 DNA-binding protein n=1 Tax=Colwellia psychreryt... 180 2e-44 UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax... 179 4e-44 UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B... 178 6e-44 UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID... 178 7e-44 UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus ... 178 7e-44 UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusob... 177 1e-43 UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Cl... 177 2e-43 UniRef50_Q2BZH4 Transcriptional regulator, HTH_3 family protein ... 176 3e-43 UniRef50_A6F756 DNA-binding protein n=1 Tax=Moritella sp. PE36 R... 176 3e-43 UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba... 176 3e-43 UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Bu... 176 3e-43 UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=My... 175 4e-43 UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus claus... 175 5e-43 UniRef50_Q49XM3 Predicted transcriptional regulator n=1 Tax=Stap... 175 6e-43 UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Pr... 175 6e-43 UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M... 175 6e-43 UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost... 175 7e-43 UniRef50_D2BA96 Putative transcriptional regulator, XRE family n... 174 1e-42 UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostri... 173 3e-42 UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th... 172 3e-42 UniRef50_C0C4F2 Putative uncharacterized protein n=2 Tax=Clostri... 172 3e-42 UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseu... 171 1e-41 UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a... 171 1e-41 UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl... 169 3e-41 UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostri... 169 4e-41 UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH... 169 4e-41 UniRef50_A1JM20 Putative DNA-binding protein n=1 Tax=Yersinia en... 168 6e-41 UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R... 168 8e-41 UniRef50_B4RY23 Transcriptional regulator, HTH_3 family protein ... 167 2e-40 UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre... 167 2e-40 UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=... 165 6e-40 UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=B... 165 6e-40 UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q... 165 7e-40 UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahe... 165 7e-40 UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi... 164 1e-39 UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re... 164 1e-39 UniRef50_C4Z9Q8 Putative uncharacterized protein n=3 Tax=Clostri... 164 2e-39 UniRef50_A9FKR7 DNA-binding protein n=2 Tax=Myxococcales RepID=A... 163 2e-39 UniRef50_C5RJ85 Transcriptional regulator, XRE family n=1 Tax=Cl... 163 2e-39 UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro... 163 3e-39 UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl... 163 3e-39 UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum... 162 5e-39 UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Bu... 160 1e-38 UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax... 160 1e-38 UniRef50_A8U412 Transcriptional regulator, XRE family with cupin... 160 1e-38 UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni... 160 1e-38 UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rh... 160 2e-38 UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=... 160 2e-38 UniRef50_B7IJ03 DNA-binding protein n=74 Tax=Bacillus RepID=B7IJ... 159 3e-38 UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin... 159 3e-38 UniRef50_Q6MKI2 Putative DNA-binding protein n=1 Tax=Bdellovibri... 159 4e-38 UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De... 159 5e-38 UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Op... 159 6e-38 UniRef50_B8EMC1 Transcriptional regulator, XRE family n=1 Tax=Me... 159 6e-38 UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax... 158 8e-38 UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu... 158 9e-38 UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin... 158 9e-38 UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost... 157 1e-37 UniRef50_C9KMM8 Putative transcriptional regulator n=1 Tax=Mitsu... 157 1e-37 UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar... 157 2e-37 UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo... 157 2e-37 UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch... 157 2e-37 UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hy... 156 3e-37 UniRef50_UPI00005895B5 truncated transcriptional regulator n=1 T... 156 3e-37 UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepI... 156 4e-37 UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be... 155 4e-37 UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th... 155 5e-37 UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge... 155 5e-37 UniRef50_D0LSP1 Transcriptional regulator, XRE family n=1 Tax=Ha... 155 7e-37 UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga... 154 9e-37 UniRef50_D2JL57 DNA-binding protein, putative n=1 Tax=Staphyloco... 154 1e-36 UniRef50_A4C3V5 DNA-binding protein n=1 Tax=Pseudoalteromonas tu... 154 1e-36 UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin... 154 2e-36 UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin... 154 2e-36 UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea... 154 2e-36 UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax... 154 2e-36 UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti... 153 2e-36 UniRef50_C9NG53 Transcriptional regulator, XRE family n=3 Tax=Ac... 153 2e-36 UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F... 153 2e-36 UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Ma... 153 3e-36 UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Bu... 153 3e-36 UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin... 153 3e-36 UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales ... 152 3e-36 UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Pr... 152 4e-36 UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh... 152 4e-36 UniRef50_C9ZEI0 Putative DNA-binding protein n=1 Tax=Streptomyce... 152 5e-36 UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin... 152 5e-36 UniRef50_B2PVG1 Putative uncharacterized protein n=1 Tax=Provide... 152 5e-36 UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax... 152 5e-36 UniRef50_B1HMP7 Transcriptional regulator n=2 Tax=Bacillaceae Re... 151 8e-36 UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill... 151 8e-36 UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin... 151 8e-36 UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=De... 151 8e-36 UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7... 151 1e-35 UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me... 150 1e-35 UniRef50_B8IHD2 Transcriptional regulator, XRE family n=13 Tax=A... 150 1e-35 UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte... 150 1e-35 UniRef50_C2LK61 Transcriptional regulator n=4 Tax=Enterobacteria... 150 2e-35 UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Pr... 150 2e-35 UniRef50_A7MK95 Putative uncharacterized protein n=1 Tax=Cronoba... 150 2e-35 UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzi... 150 2e-35 UniRef50_A4FBL3 Transcriptional regulator, Cro/CI family n=2 Tax... 150 2e-35 UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh... 150 2e-35 UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=... 150 2e-35 UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin... 150 3e-35 UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammapr... 150 3e-35 UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy... 149 3e-35 UniRef50_Q1R147 Transcriptional regulator, XRE family with cupin... 149 4e-35 UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=... 149 5e-35 UniRef50_C1B633 Putative uncharacterized protein n=1 Tax=Rhodoco... 149 5e-35 UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh... 148 7e-35 UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci... 148 7e-35 UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Ta... 148 8e-35 UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Aci... 148 8e-35 UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi... 148 8e-35 UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=... 148 9e-35 UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Ac... 148 9e-35 UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C... 148 9e-35 UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1... 147 1e-34 UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B... 147 1e-34 UniRef50_C8WYG8 Transcriptional regulator, XRE family n=2 Tax=Al... 147 1e-34 UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Ve... 147 1e-34 UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein... 147 1e-34 UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein... 147 2e-34 UniRef50_Q1EMV7 Putative DNA binding regulatory protein n=1 Tax=... 147 2e-34 UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De... 147 2e-34 UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob... 147 2e-34 UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=De... 147 2e-34 UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ... 147 2e-34 UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rh... 147 2e-34 UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin... 146 3e-34 UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=B... 146 3e-34 UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin... 146 3e-34 UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De... 146 3e-34 UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=... 146 3e-34 UniRef50_A3MUA0 Transcriptional regulator, XRE family n=1 Tax=Py... 146 3e-34 UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B... 146 4e-34 UniRef50_A6G914 Transcriptional regulator, XRE family with cupin... 146 4e-34 UniRef50_C8XHM1 Transcriptional regulator, XRE family n=2 Tax=Fr... 145 4e-34 UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My... 145 4e-34 UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba... 145 4e-34 UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B... 145 5e-34 UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde... 145 5e-34 UniRef50_C9ND81 Transcriptional regulator, XRE family n=1 Tax=St... 145 7e-34 UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco... 144 1e-33 UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin... 144 1e-33 UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kl... 144 1e-33 UniRef50_A4FEP7 Transcriptional regulator, XRE family n=1 Tax=Sa... 144 1e-33 UniRef50_C7PXU7 Transcriptional regulator, XRE family n=1 Tax=Ca... 144 1e-33 UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepI... 144 1e-33 UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin... 144 1e-33 UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rh... 144 1e-33 UniRef50_C5BLI6 DNA-binding protein n=1 Tax=Teredinibacter turne... 144 2e-33 UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteoba... 144 2e-33 UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein... 143 2e-33 UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin... 143 2e-33 UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac... 143 2e-33 UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi... 143 2e-33 UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burne... 143 3e-33 UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0... 143 3e-33 UniRef50_B5XVI4 DNA-binding protein n=3 Tax=Enterobacteriaceae R... 143 3e-33 UniRef50_B6A104 Transcriptional regulator, XRE family n=49 Tax=c... 142 4e-33 UniRef50_Q39D54 Transcriptional regulator, XRE family n=59 Tax=P... 142 4e-33 UniRef50_B9L7E6 Helix-turn-helix protein n=1 Tax=Nautilia profun... 142 6e-33 UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro... 142 6e-33 UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba... 142 7e-33 UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus... 141 8e-33 UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Ac... 141 8e-33 UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n... 141 8e-33 UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Ga... 141 9e-33 UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin... 141 9e-33 UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax... 141 1e-32 UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa... 141 1e-32 UniRef50_Q2KW20 Putative transcriptional regulator n=1 Tax=Borde... 141 1e-32 UniRef50_Q1R0K7 Transcriptional regulator, XRE family n=1 Tax=Ch... 141 1e-32 UniRef50_UPI0001B543C0 hypothetical protein SSPB78_17204 n=1 Tax... 140 1e-32 UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax... 140 2e-32 UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D... 140 2e-32 UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin... 140 2e-32 UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=... 140 2e-32 UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin... 139 3e-32 UniRef50_UPI0001C30F4B transcriptional regulator, XRE family n=1... 139 3e-32 UniRef50_C7Q8B8 Transcriptional regulator, XRE family n=4 Tax=Ac... 139 3e-32 UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re... 139 4e-32 UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P... 139 4e-32 UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Dein... 139 4e-32 UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Pr... 139 4e-32 UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid... 139 5e-32 UniRef50_UPI000050F7A7 helix-turn-helix domain-containing protei... 139 5e-32 UniRef50_B4SZY7 Transcriptional regulator, XRE family n=57 Tax=B... 139 5e-32 UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin... 139 6e-32 UniRef50_C2ASM9 Predicted transcriptional regulator n=1 Tax=Tsuk... 138 7e-32 UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag... 138 9e-32 UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al... 138 9e-32 UniRef50_D1SYA6 Transcriptional regulator, XRE family n=1 Tax=Ac... 137 1e-31 UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI... 137 1e-31 UniRef50_B2TDB5 Transcriptional regulator, XRE family n=5 Tax=Ba... 137 1e-31 UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin... 137 2e-31 UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostri... 137 2e-31 UniRef50_A4X7C8 Helix-turn-helix domain protein n=1 Tax=Salinisp... 137 2e-31 UniRef50_A4AL40 Putative regulatory protein n=2 Tax=Actinobacter... 137 2e-31 UniRef50_B7GVK0 Helix-turn-helix family protein n=11 Tax=Acineto... 137 2e-31 UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi... 136 3e-31 UniRef50_UPI0001C36321 DNA-binding protein, putative n=1 Tax=Clo... 136 3e-31 UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sang... 136 4e-31 UniRef50_A9ADC6 Transcriptional regulator, XRE family n=61 Tax=B... 136 4e-31 UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh... 135 5e-31 UniRef50_B1MI43 Hypothetical transcriptional regulator n=1 Tax=M... 135 5e-31 UniRef50_A6V7P4 DNA-binding protein n=45 Tax=Bacteria RepID=A6V7... 135 5e-31 UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=... 135 6e-31 UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost... 135 6e-31 Sequences not found previously or not previously below threshold: UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni... 153 2e-36 UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7... 148 9e-35 UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De... 145 9e-34 UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ... 142 7e-33 UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca... 140 2e-32 UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean... 139 3e-32 UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=B... 139 4e-32 UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A... 138 6e-32 UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot... 138 8e-32 UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do... 137 1e-31 UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hy... 137 1e-31 UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo... 137 2e-31 UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C... 137 2e-31 UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ... 136 3e-31 UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 ... 135 5e-31 >UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54 Tax=Enterobacteriaceae RepID=YDCN_ECOLI Length = 178 Score = 268 bits (687), Expect = 4e-71, Method: Composition-based stats. Identities = 178/178 (100%), Positives = 178/178 (100%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN Sbjct: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG Sbjct: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS Sbjct: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 >UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica RepID=B5FUU1_SALDC Length = 185 Score = 243 bits (620), Expect = 3e-63, Method: Composition-based stats. Identities = 129/177 (72%), Positives = 151/177 (85%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+NL +L+TTL+ LR QRGWSLSRLAE +GVSKAMLGQIERNESSPTVATLWKIATGLN Sbjct: 8 MDNLTHYLATTLRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 67 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 VPFS FISPPQ+ P +DPQQQAMVIT LFP+DP+LCF++FS+ +A G +SESTPH+ G Sbjct: 68 VPFSMFISPPQAEFPPTFDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVSESTPHKAG 127 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 VIEHVVVI G+LD+C G WQT++ G+G+RFA D H YRN +QTVHFHSLIHYPR Sbjct: 128 VIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHFHSLIHYPR 184 >UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulator ydcN n=2 Tax=Cronobacter RepID=C9Y503_CROTZ Length = 204 Score = 218 bits (557), Expect = 6e-56, Method: Composition-based stats. Identities = 105/174 (60%), Positives = 129/174 (74%), Gaps = 1/174 (0%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 ++ L+ TLK LRQQ+ WSL++ A+ TGVSKAMLGQIERNESSPTVATLWKIATG NVP Sbjct: 30 DITAHLAQTLKALRQQKNWSLTQAAQETGVSKAMLGQIERNESSPTVATLWKIATGFNVP 89 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 FS FI+PP +V+D QQ M++ LFP+D QL F+ ++ +A GA S+STPHE GV Sbjct: 90 FSVFITPPAPGARTVFDA-QQTMLVEPLFPWDEQLRFDMLAVTLAPGAQSDSTPHENGVT 148 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EHVVVI+G+L+L DG W+ L GEG++FA D H YRN V FHSLIHYP Sbjct: 149 EHVVVIEGELELQTDGVWRRLGPGEGLKFAGDRPHAYRNATPLPVRFHSLIHYP 202 >UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium RepID=A6LSV7_CLOB8 Length = 184 Score = 211 bits (538), Expect = 8e-54, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 107/184 (58%), Gaps = 7/184 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M NL + + LK++R +R SL A+ TGVSKAMLGQIER +S+PTV+TLWKI+TGL Sbjct: 1 MRNLNSIIGSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKISTGLK 60 Query: 61 VPFSTFISPPQSATPSVYDP-------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS FI Q V M + +FP+D FE F+I++ SG Sbjct: 61 VSFSFFIDEEQDELEIVDQNNIDPIIEDDARMKLYPIFPFDANRGFEIFTIELESGCNHV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 STPH GV E+++V G++++ +D + +L G ++F A++ H YRN + F ++I Sbjct: 121 STPHSDGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVSREKAIFQNII 180 Query: 174 HYPR 177 Y R Sbjct: 181 LYFR 184 >UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes RepID=C6Q1A6_9CLOT Length = 184 Score = 209 bits (533), Expect = 3e-53, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + L +R+Q+G SL ++AE TGVSK ML QIE+ S+PTV TLWKIATGLN Sbjct: 1 MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS F+ V + M++ LFPYD FE F+I++ G + Sbjct: 61 VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVYPLFPYDNTRRFEVFTIELEPGCNHK 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH +G E++VV G+++ + L+ G+ +R+ A+ H YRN + V F +I Sbjct: 121 SVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEIVIFQHII 180 Query: 174 HY 175 +Y Sbjct: 181 YY 182 >UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria RepID=A0KQ29_AERHH Length = 230 Score = 206 bits (524), Expect = 4e-52, Method: Composition-based stats. Identities = 95/187 (50%), Positives = 116/187 (62%), Gaps = 9/187 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + + L+ LK LR + GWSL A TGVSKAMLGQIER ESSPTVATLWKIATG Sbjct: 42 MQEMNQHLAQRLKGLRSELGWSLDVAARETGVSKAMLGQIERGESSPTVATLWKIATGFR 101 Query: 61 VPFSTFISPPQSATPSVY---------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 V FS+FI P + V P + M + LFPY+ + FE F + + G Sbjct: 102 VSFSSFIEPTPAEQGEVLYRTADAIRQQPAGEGMQVAPLFPYEGRFGFELFELTLLPGYQ 161 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 ES PHE GV EHV+VI G +++ V+GEW++L GE VRFAAD H YRN G FH+ Sbjct: 162 RESEPHEPGVTEHVIVISGLMEVLVEGEWRSLTQGEAVRFAADRPHGYRNLGVAPAIFHN 221 Query: 172 LIHYPRS 178 LIHYP S Sbjct: 222 LIHYPVS 228 >UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LQ1_BACLD Length = 183 Score = 201 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M ++ + ++ +K+LR+ R +SL +L+ TGVSK ML QIE+ SSPT+ TLWKIA GL Sbjct: 1 MNSIEKQVAENIKRLRKIRNYSLDQLSSMTGVSKGMLAQIEKGSSSPTITTLWKIANGLQ 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F++ P V + ++ FP+D + FE F I++A G + E Sbjct: 61 VSFTSLAERPAGEPTVVRKHEKTPVMAGEEKYAAFPHFPFDQKKKFEIFYIELAPGCVHE 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH G+ E+V+V G L + LN G+ + F A+ H Y+N EQT ++LI Sbjct: 121 SEPHHGGIEEYVLVSKGALAVTAGDYTCDLNEGDAMHFTANTVHTYKNNTEQTASCYTLI 180 Query: 174 HYP 176 +YP Sbjct: 181 YYP 183 >UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA45 Length = 189 Score = 201 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + + + L+ +R+ RG SL +AE TGVSKAMLGQIER +S+PT++ LW+I +GL Sbjct: 1 MEPIHKKVGRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLG 60 Query: 61 VPFSTFISPPQSATPSV-------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F+T I ++ V + + A + LF Y+ + FE + + M G Sbjct: 61 ISFTTLIEEAETEVTVVSPDDVEPFHEAEGAYRVYPLFSYNLRTKFESYMVIMDPGCDHG 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H GV E++ V G+L+L + E T+ G V F+A+ H Y N G +T F+++I Sbjct: 121 SEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVNPGNETTKFYTII 180 Query: 174 HY 175 Y Sbjct: 181 FY 182 >UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDG4_BREBN Length = 185 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + +K++R++R SL + +E TGVSK MLGQIER +S+PT+ TLWKIA+GL Sbjct: 1 MEEFHTNIGENIKRIRKERNLSLDKTSEITGVSKTMLGQIERGKSAPTITTLWKIASGLR 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + FS+ IS + V + + L PY+P+ FE FS+ + G Sbjct: 61 LSFSSLISQYKPNVTIVKKKEVNPIIENDGQYRVYPLVPYNPEQQFEIFSVTLEPGCEHI 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH GV E ++V +G L++ V+ + + + + F AD HIY+N G++ V +I Sbjct: 121 AEPHTTGVEEFILVNEGTLEVVVNEQIYVVEPEDTLIFKADRPHIYQNNGDRIVKCSVII 180 Query: 174 HY 175 HY Sbjct: 181 HY 182 >UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R4_STAS1 Length = 181 Score = 199 bits (507), Expect = 3e-50, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N+ ++ + R++ SL ++A ATGVSK ML QIE+ +S+PT+ TLWKIA GL+ Sbjct: 1 MYNIQSIVAKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLH 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-----QQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + S S + + + + I FPYD FE F +++ G S Sbjct: 61 ISLSQLTSTSNDTIDFIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKMHSD 120 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 PH G E+++V DG L++ VDG+ T+N + RF +D+ H Y N G V S ++Y Sbjct: 121 PHHPGSEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVALTSTMYY 180 >UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD Length = 189 Score = 198 bits (504), Expect = 8e-50, Method: Composition-based stats. Identities = 72/181 (39%), Positives = 103/181 (56%), Gaps = 7/181 (3%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L++ + LK++R RG +L +LA+ TGVSK MLGQIER ES+PTV+TLWKIATGL+V Sbjct: 4 EMLSKRIGQRLKRIRSDRGMTLDQLAKKTGVSKPMLGQIERGESNPTVSTLWKIATGLHV 63 Query: 62 PFSTFISPPQSATPSVYDPQQQAMV------ITSLFPYDPQLCFEHFSIQMASGAISEST 115 F+ FI + + Q ++ + LFP FE FS+++ +G S Sbjct: 64 SFTAFIEDEKPNVTVIKRDQVLPIIDGCDFQVFPLFPRSKDKPFEIFSVKLEAGTDHTSE 123 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNG-GEQTVHFHSLIH 174 H +GV E V+V G L++ + E L G+G+ F AD H Y NG + F ++I Sbjct: 124 GHAQGVHEFVIVEKGTLNVKIGDEVYVLERGDGIHFPADQVHHYINGSSSEACVFTNIIS 183 Query: 175 Y 175 Y Sbjct: 184 Y 184 >UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WK19_9GAMM Length = 174 Score = 197 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 75/175 (42%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N ++ LK+LR+ +GWSL+ AE TGVSKAMLGQIER ESSPT+ATLWK+ATG N Sbjct: 1 MQNNHHTVARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 V S ++ Q P +D + + + L +DPQ E + + MA GA S S H +G Sbjct: 61 VSLSWLLNDEQ--QPMTFDFAHERIQVERLLAFDPQTQQEVYKLCMAEGAQSHSDAHRRG 118 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + V G+LD+ V T+ GE RF A H Y N F ++I+Y Sbjct: 119 TFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSGKTEFLAVINY 173 >UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH Length = 204 Score = 196 bits (500), Expect = 2e-49, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 7/185 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + L+ LK +R++ SL ++++ TGVSK M+GQIER ESSPT+ T+WKIA GL Sbjct: 20 MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79 Query: 61 VPFSTFISPPQSATPSVYDPQQQ-------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F++ I+ PQ T + Q + FP+ FE +++++ + Sbjct: 80 VSFTSLINNPQPDTKVILRNDIQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAEGKLS 139 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H++G E + V +G+L + ++ LN G+ +RF AD H Y N G I Sbjct: 140 SEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRLSMTI 199 Query: 174 HYPRS 178 +Y S Sbjct: 200 YYSAS 204 >UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C7IC10_9CLOT Length = 184 Score = 195 bits (496), Expect = 6e-49, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+NL+ +S LK++R+++ SL +A+ +GVSK+MLGQIER E +PTV+T+WKIA GL Sbjct: 1 MDNLSNIISENLKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLK 60 Query: 61 VPFSTFISPPQSATPSVYDP-------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS ++ ++ V + + I F +D FE +S++ + Sbjct: 61 VSFSQLVNHTETNVEIVDIKNLKPLLEDEGRVRIYPTFSFDSTRRFEIYSLEFQTNGYLS 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH +GV E + V G+L + V + ++ G+ +RF AD H Y+N G +I Sbjct: 121 TEPHLQGVQEFLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANCLLDMVI 180 Query: 174 HYP 176 YP Sbjct: 181 FYP 183 >UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B0MBC4_9FIRM Length = 180 Score = 187 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 7/180 (3%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ +K+LR+++ S+ L++ +GVSK+ML QIER + +PT++TLWKI+ G+ VPF Sbjct: 1 MNLIVAKNIKRLREKQKLSMEALSKLSGVSKSMLAQIERGDGNPTISTLWKISNGMKVPF 60 Query: 64 STFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISESTP 116 P++ + + ++ LFP D F + +++ + ES Sbjct: 61 DALTVRPKTPYEIIKTADIEPLLEDSGRVKNYPLFPDDADRKFAVYYLKLEPYSRWESEA 120 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 H KG E + V G L++C D TL E +RF D H YRN G TV + ++ YP Sbjct: 121 HLKGTTEFITVFHGDLEICADCHKFTLTKDESIRFPGDTAHSYRNTGNDTVVLYMILFYP 180 >UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR34_RHORT Length = 248 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 8/182 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+L + L++LR RG SL RLA+ +GVS+AMLGQIE S+PT+ LWKIA L+V Sbjct: 62 EDLMPVVGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALDV 121 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAISE 113 PFS F++ P + V + + + +LFP+D E + + ++ +I++ Sbjct: 122 PFSAFVAAPALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIAQ 181 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH G +E + V G L++ L+ G+ ++F AD+ H YRN G F+ ++ Sbjct: 182 SHPHPAGTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNPGGDDTVFYLVM 241 Query: 174 HY 175 Y Sbjct: 242 TY 243 >UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus RepID=A9A888_METM6 Length = 209 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 7/184 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 MEN + +S LK++R + G SL +++ TGVSK MLGQIER E +PT++T+ KIA GL Sbjct: 26 MENPSHVISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLK 85 Query: 61 VPFSTFISPPQSATPSVY-------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F++ +S ++ +V + +F ++ FE ++ G + Sbjct: 86 ISFTSLLSEKEADVKTVELNNVSPIYDDSKKWRFYPVFNFEDSRPFEISYVEADPGVVMS 145 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H K E V V +G+L L ++ + T++ G +RF A+V H Y N + H ++ Sbjct: 146 SDGHIKNSEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVIHMML 205 Query: 174 HYPR 177 +YP+ Sbjct: 206 YYPK 209 >UniRef50_B1HN87 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HN87_LYSSC Length = 183 Score = 185 bits (470), Expect = 7e-46, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME ++R L+ LK++RQQR SL +A+ATGVSKA L QIE+ E++PTV+T+WKIA G+ Sbjct: 1 MEQMSRNLAFQLKKIRQQRHLSLDDVAKATGVSKAQLAQIEKGEANPTVSTIWKIAAGMR 60 Query: 61 VPFSTFISPP-------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + FS+ + PP S D + + S+ PY+P+ +E + ++M GA+S Sbjct: 61 ISFSSLLQPPTAHFMRYSSKDVPHVDEDEGRYRVYSIIPYNPERGWEFYKVEMEPGAVSR 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H +GV E V++I GQ + + L+ G+ + F+ H YRN E FH ++ Sbjct: 121 SEAHTEGVEETVMIIKGQAAISAGDMHELLDEGDTLVFSGHQPHEYRNTSEGLTIFHLIL 180 Query: 174 HY 175 Y Sbjct: 181 QY 182 >UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUL8_9FIRM Length = 186 Score = 184 bits (469), Expect = 8e-46, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 1 ME-NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGL 59 M+ N+ + +++LR+ + +L A ATGVS++ML QIE+ + +PT++ LWKIA G Sbjct: 1 MDININLEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGY 60 Query: 60 NVPFSTFISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 V F++ + + + +F +D + FE + I + G Sbjct: 61 KVSFTSLVETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKLFETYRIVIKPGGCL 120 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ++ PH G E++ + GQ + G+ L G+ +RF AD H YRN G + Sbjct: 121 KARPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTGNAEMSMV 180 Query: 173 IHYPR 177 I Y R Sbjct: 181 IFYGR 185 >UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=B3QIN2_RHOPT Length = 207 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L++LR ++G+SL RLA+ +GVS+AMLGQIE +S PT+ TLWK+AT L VP Sbjct: 21 DLPSIVGHNLRRLRVRQGYSLERLAKQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVP 80 Query: 63 FSTFISPPQSATPSVYD--------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F+ I+ P V Q +LFP+D + E + +++A ++ Sbjct: 81 FARLIATETPHHPQVLRRTDAKLLTSNQGQFTSRALFPFDGERQVEFYELRLAPLHREDA 140 Query: 115 TPHEKGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 PH G E++VV G +++ L+ G+ + F ADV H YRN G + ++ Sbjct: 141 DPHAAGTRENLVVAKGAVEITAGAERPVVLSAGDAILFDADVPHSYRNLGAEEAVLFLVM 200 Query: 174 HY 175 Y Sbjct: 201 TY 202 >UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax=Vibrio RepID=A5F6U2_VIBC3 Length = 181 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 2/175 (1%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 ++ LK LR+ RG SL A+ TGVSKAMLGQIER ESSPT+ATLWKIA+GL F Sbjct: 6 FKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASF 65 Query: 64 STFIS-PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 S F + PQ + P M I +LFPY E F I + S+PH GVI Sbjct: 66 SAFFANDPQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVI 125 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 E++ V++G + + D +W L GE +RF +D H Y E+ V F +++ YPR Sbjct: 126 EYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPR 179 >UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0X7_HALOH Length = 182 Score = 182 bits (462), Expect = 5e-45, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L++LR +G+SL L E GVSK+MLGQIER +++PTV TLWK+A LN Sbjct: 1 MNEINANIGKKLRKLRIGKGYSLGDLEEIAGVSKSMLGQIERGKTNPTVKTLWKVARSLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VPFS FI S ++ + L P + FE + +++ G + Sbjct: 61 VPFSFFIEEETSPVKVFSPSKEVLVSGKKGRYRVYPLMPLNRTKNFEIYLMEIEPGYSYK 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH +GV E V+V +G L L V+ + E + F D HIY N E + + L+ Sbjct: 121 SEPHSQGVEEFVMVKEGILRLTVNSKEYKAREEEIIHFPGDRVHIYHNISETPLKAYVLV 180 Query: 174 HY 175 Y Sbjct: 181 CY 182 >UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira RepID=B0SF19_LEPBA Length = 207 Score = 182 bits (462), Expect = 6e-45, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 8/182 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + LK +R +G+SL +LA GVS+AML QIE+ +S PT++ LWKIA GLNV Sbjct: 21 DYITDVVKENLKLIRHTKGFSLDKLANRCGVSRAMLSQIEQGKSVPTISVLWKIANGLNV 80 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAISE 113 PFS + + + ++ +LFP+ E + + + G Sbjct: 81 PFSELLKEKNQDGIHILKAENSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEV 140 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH+ G E++VV+ G+L L V + L + V F ADV+H Y N +Q + ++ Sbjct: 141 AEPHKTGTTENLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM 200 Query: 174 HY 175 Y Sbjct: 201 DY 202 >UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N143_CLOK5 Length = 184 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 100/181 (55%), Gaps = 6/181 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME++ + LK +R++R +L L++ T VS +MLG+IER ++PT+ LWKIA GL Sbjct: 1 MEDIKSIIGINLKNIRKKRQLTLEMLSKLTNVSISMLGEIERGITNPTITVLWKIADGLK 60 Query: 61 VPFSTFISPPQSATPSVYDPQ------QQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 +PF+ I+ + VY+ + + SLF +DP E + + G+ ES Sbjct: 61 IPFTDLINEEKPPISVVYNSDAKTIINESGFKLFSLFNFDPIKKIELYYKILEVGSSYES 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H G+ E++++ +G ++L + + L+ G+ + F ++ H Y+N GE + + L++ Sbjct: 121 KGHTVGIEEYIMICNGIMNLQIGDKNYILSKGDSINFKGNIYHRYKNEGELPLRAYMLLY 180 Query: 175 Y 175 Y Sbjct: 181 Y 181 >UniRef50_Q484W4 DNA-binding protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484W4_COLP3 Length = 185 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 1/174 (0%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + + LK R +GWSL ++ T VSKAMLGQIER ESSPTVA LW IATG ++P Sbjct: 4 NFNNAIGSQLKLARTNKGWSLDIASKNTNVSKAMLGQIERGESSPTVARLWDIATGFHLP 63 Query: 63 FSTFISPPQSATPSVYD-PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 S F + S + + I++LFP+D + E FS+ +AS S PH GV Sbjct: 64 LSYFFLAIEDDDVSKNMLNSEAGISISTLFPFDVETKSEVFSLTLASLHQQISAPHNDGV 123 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 IEH++VI+G ++ ++G+W L+ G+ V+F A+ H YRN E FH++I Y Sbjct: 124 IEHILVIEGDMEYLLNGQWHHLSKGDVVKFNANQKHGYRNVSEHQAVFHNIICY 177 >UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria (class) RepID=A1RBM5_ARTAT Length = 206 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 8/181 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ + ++Q RQ RGW+L +LAEA GVS+ M+ +E+ ++P+V TL +I+ L V Sbjct: 14 LSLAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRISDALGVGL 73 Query: 64 STFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISEST 115 + P+ V + A + TS + + E + + G S Sbjct: 74 PALVESPRPKPVKVTRSGEGAALWTSEQGGRGVLVAGTESPDVVELWDWTLGPGDQHGSE 133 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H G E + V+ G L + VDG TL G+ + F DV H Y N G V F + Sbjct: 134 AHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYANPGTDPVRFSLAVFG 193 Query: 176 P 176 P Sbjct: 194 P 194 >UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM Length = 183 Score = 178 bits (453), Expect = 6e-44, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 7/181 (3%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ ++ LK LR +R SL +LAE + +SK ML QIE+++++PT+ TLWKIA GL VP Sbjct: 2 NINSIIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLKVP 61 Query: 63 FSTFISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 ++ + + T + ++ + P FE F I++ G S Sbjct: 62 YTLLLEQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRNFELFQIELDEGCSYRSV 121 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H K E+++V++G+L L V+ E LN + + F+ HIY N G T+ Y Sbjct: 122 GHSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLKATITNFY 181 Query: 176 P 176 P Sbjct: 182 P 182 >UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID=C4IIY7_CLOBU Length = 183 Score = 178 bits (453), Expect = 7e-44, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + R +S LK +R+ + SL ++E TGVSK+MLGQIER ES+PTVA L KI +GL Sbjct: 1 MDYINRNVSINLKNIRKSKKMSLDVVSEQTGVSKSMLGQIERGESNPTVAILGKIVSGLR 60 Query: 61 VPFSTFISPPQSA----TPSVYDPQQQA---MVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F+ + P+ +P +++ + + FPY+ FE + I++ G + Sbjct: 61 VSFNDLVCMPKEEIYIVKKESLEPSKESTDQYSVYTYFPYEEDRNFEIYMIEIKPGGVYT 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + H + E++ VI G+L L +D + + G+ VRF D H+Y N + + F+++ Sbjct: 121 TGSHGEKTCEYINVIKGELTLEIDEKKYVIKSGDAVRFNTDKDHVYINDTNELLSFNAVF 180 Query: 174 HY 175 ++ Sbjct: 181 YW 182 >UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X8B7_ENTFA Length = 183 Score = 178 bits (453), Expect = 7e-44, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + + LK++RQ++ +L LA TGVSK ML QIE+ ++PT+ T+WKI+ GLN Sbjct: 1 ME-INTIIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLN 59 Query: 61 VPFSTFISPPQSATPSVY--------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 VP++ + V + + + + + + + FE F ++ SG Sbjct: 60 VPYTYLLEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFELDSGKKY 119 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ++ H K IE+V+VI G L L V + L + F A+ H Y N G + V + Sbjct: 120 QAVGHSKRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQVQAVVI 179 Query: 173 IHY 175 +Y Sbjct: 180 NYY 182 >UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TWB6_FUSNP Length = 182 Score = 177 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 99/181 (54%), Gaps = 8/181 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L +S +K++RQ++ SL LA+ + VSK+ML QIER E +PT++TLWKIA G+ Sbjct: 1 MDRLNILVSENIKRIRQEKNLSLGDLAKLSDVSKSMLAQIERGEGNPTLSTLWKIANGMQ 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 V F+T I+ P+ + + ++ SLF D + F + I++ Sbjct: 61 VSFNTLIAQPKLPYKVTKLAEIEPILDMNGGLKNYSLFS-DIENNFSVYQIEVGKEISWI 119 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H G E V+VI G L++ ++ + L GE + F AD+ H Y N E T FH+++ Sbjct: 120 SEAHLSGTAEFVIVIQGTLEIKLEEKTFILKKGENLWFKADIPHGYCNLDEGTTIFHNIL 179 Query: 174 H 174 + Sbjct: 180 Y 180 >UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C6PVT7_9CLOT Length = 182 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + + LK++R +R +L + TGVSKAMLGQIER ES+PT++ LWKI+TGL Sbjct: 1 MNDPTYNIGSVLKRVRFERELTLEETSNLTGVSKAMLGQIERGESNPTISILWKISTGLR 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + FS + +V M++ +FP++P FE+F I++ GA Sbjct: 61 ISFSELLGSENDDYKAVSIDDIEPVYESDGKMILYDVFPFNPLSGFEYFYIKLLPGAHHV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 STPH+ V E++VV G L L + + L +RF + +H Y N ++ V F ++I Sbjct: 121 STPHQSSVEEYIVVTKGTLKLTLGEQTFELTSPAALRFKPNKSHTYSNPYDEEVIFQNVI 180 Query: 174 HY 175 Y Sbjct: 181 KY 182 >UniRef50_Q2BZH4 Transcriptional regulator, HTH_3 family protein n=3 Tax=Vibrionaceae RepID=Q2BZH4_9GAMM Length = 183 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 4/177 (2%) Query: 1 MEN--LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATG 58 M +S LK LR+++ SL ++ TGVSKAMLGQIER ESSPTVATLWKI++G Sbjct: 2 MNEEIFKARISKHLKALREKQKLSLDATSKLTGVSKAMLGQIERKESSPTVATLWKISSG 61 Query: 59 LNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 LN F+ F S ++ P M + +L YDP + FE F I + S+PH+ Sbjct: 62 LNSSFTAFFSDQNDTDGRIF-PADIDMHVKTLITYDPTVRFEMFEITLTHFHTQHSSPHK 120 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G IEH VV +G+L + +D +W L+ GE +RF AD H YR ++V FH+++ Y Sbjct: 121 TGTIEHSVVTEGELGVYIDDKWHYLSKGESIRFEADKPHDYRAVT-ESVVFHNIVSY 176 >UniRef50_A6F756 DNA-binding protein n=1 Tax=Moritella sp. PE36 RepID=A6F756_9GAMM Length = 214 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 99/195 (50%), Gaps = 19/195 (9%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ L + LK R +GWSL + ++ TGVSKAMLGQIER ESSPTV LW IA G +P Sbjct: 20 NIHTSLGSRLKTARSNKGWSLDKTSQHTGVSKAMLGQIERGESSPTVVKLWNIANGFELP 79 Query: 63 FSTFISPPQSATPSV------------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA 110 S F++ + + I +LFPYDP E F I + Sbjct: 80 LSYFLTDLAQTQAETSANTSLNTALNKLQNSEDDIHIVTLFPYDPLTKLEVFQITLDPQR 139 Query: 111 ISESTPHEKGVIEHVVVIDGQLDL-------CVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 S PH GV+EH++ +DG ++ + +W L G+ ++F AD H YRN Sbjct: 140 EHISAPHNAGVVEHIIAVDGTMEYFLALTADGIAQQWHALKQGQSIKFNADQQHGYRNMT 199 Query: 164 EQTVHFHSLIHYPRS 178 E+ V H++I Y ++ Sbjct: 200 EKPVTIHNIISYTQT 214 >UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=D2R569_9PLAN Length = 202 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 10/186 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L + + ++ +R+ +GW+L +LA +GVS++ML +IER ++PT+ ++IA + Sbjct: 12 EPLQQLVCDRVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGM 71 Query: 62 PFSTFISPPQSATPSVY--DPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGAI 111 + P+ P + ++ + I +L P + E + + + +G Sbjct: 72 TLGDLVDSPEPPKPRIDVIRSDDRSFMFRDDSDCRIRTLSPLHLEKDVEFYELTLRTGGK 131 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 ES PH +G E + V G + L E L G+ + ADV H RN G Sbjct: 132 LESQPHFEGTREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRGEAVVFL 191 Query: 172 LIHYPR 177 + Y R Sbjct: 192 VDIYGR 197 >UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Burkholderiales RepID=Q1LDV8_RALME Length = 203 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 12/182 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + + L+ LRQ + SL L+ GVSK+ML QIERN ++PTVA LW++A L V + F Sbjct: 20 AVGSALQALRQSQQLSLDELSRRAGVSKSMLSQIERNLANPTVAVLWRLANALGVSLTDF 79 Query: 67 IS----PPQSATPSVYDPQ--------QQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 ++ PQ+ +V P + L P D FE + + + G + S Sbjct: 80 LAQGTAAPQAPAITVVPPHATPALKSPDTRCELRILGPIDMAGRFEWYELSIQPGGVLAS 139 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PHE G EH+ V+ G + + G+ + L G+ R+ ADV H N G+ ++ Sbjct: 140 EPHEAGTQEHLSVLTGSMTVRSGGDEKKLKHGDTARYGADVAHAIGNPGKSVATALLVVV 199 Query: 175 YP 176 +P Sbjct: 200 HP 201 >UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=Myxococcales RepID=B8JEE6_ANAD2 Length = 260 Score = 175 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 8/182 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++L + T L++LR QR SL +L++ +GVS+AMLGQIE +S+PT+ LWKI++ L+V Sbjct: 74 KDLTPVVGTNLRRLRTQRDLSLEKLSKLSGVSRAMLGQIELGQSAPTINVLWKISSALSV 133 Query: 62 PFSTFISPPQSATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 PFS I+ + V + + +LFP+D E + ++MA G++ Sbjct: 134 PFSALITARSTGGLHVLRAEHAKVLSSHDGSYSSRALFPFDEPRRVEFYELRMAPGSVER 193 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + H G IE++VV G +++ V G + L G+ + F AD H+YR+ + + ++ Sbjct: 194 ADAHNPGTIENLVVAAGAVEIEVPGRKEQLGTGDAIVFQADAPHVYRSRADVETVMYLVM 253 Query: 174 HY 175 Y Sbjct: 254 TY 255 >UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCS3_BACSK Length = 193 Score = 175 bits (446), Expect = 5e-43, Method: Composition-based stats. Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 8/176 (4%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + + L+QLR +G S+ LA+ GVSK L +IE+ E +PT++ +WKIA GL++P + Sbjct: 17 KQIGKNLRQLRTSKGMSIEALAQQIGVSKLTLLKIEQGEGNPTLSVIWKIANGLHIPITA 76 Query: 66 FISPP------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 +S ++ ++ LF Q E + + ES H Sbjct: 77 LLSFEADVAIARANKAMKLSSSDDEFIVEPLFRS--QGLMECYRGYLQPQCRYESEAHRL 134 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 GV+E V V+ GQL + V+GE L+ + + F D H Y N G++T H LI Y Sbjct: 135 GVVETVTVMAGQLTIEVEGESHHLSAYDSIHFKGDRPHAYINLGKETAVLHFLISY 190 >UniRef50_Q49XM3 Predicted transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q49XM3_STAS1 Length = 182 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + ++ LK R+Q G+SL L+ T VSK MLGQIER ES P++ TLWKIA GL Sbjct: 1 MKEINDIIAENLKLYRKQNGYSLEHLSYLTEVSKTMLGQIERKESIPSITTLWKIANGLK 60 Query: 61 VPFSTFISPPQSATPSV-------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F+ + + I F +D + FE + + + G Sbjct: 61 VSFTELTQENDEIIRKITLNDIQPLASEDNKYQIYPYFKFDIEKKFESYMVLIEPGGTMS 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 PH G +E++ V DG L L + E + E ++F A++ H Y N + T+ + +I Sbjct: 121 GEPHGSGTMEYITVFDGTLTLILADEQFIIKENESIKFNANMFHNYANNHDTTIRINMVI 180 Query: 174 HY 175 HY Sbjct: 181 HY 182 >UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=Q3SUW3_NITWN Length = 259 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 L + L+++R ++G SL RLA+ +GVS+AMLGQIE +S+PT+ LWKI T L VP Sbjct: 73 ELPVIVGKNLRRIRLRQGLSLERLAKQSGVSRAMLGQIETGKSTPTIGLLWKICTSLTVP 132 Query: 63 FSTFISPPQSATPSVYDPQ--------QQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F++ I+ V Q +LFP+D + E + +++A + Sbjct: 133 FASLIAVGDPEGIIVLRRDGSKLLSSNQGRFTSRALFPFDSERRTEFYELRLAPLYCENA 192 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G E++VV G +++ V TL+ G+ + F ADV H YRN G + ++ Sbjct: 193 EAHAAGTRENLVVAKGSVEIAVGSARPTTLSEGDAMLFEADVPHAYRNLGTDEAVLYLVM 252 Query: 174 HY 175 Y Sbjct: 253 TY 254 >UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA Length = 178 Score = 175 bits (444), Expect = 6e-43, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 90/177 (50%), Gaps = 6/177 (3%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++QLR++RG SL +AE TG++ + L Q+ER+ + P++ +L KIA L++P F Sbjct: 1 MLGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYF 60 Query: 67 ISPPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + P+ +P V Q++ + + L D E ++ GA S P Sbjct: 61 LLNPEDHSPVVRKDQRKVLRFPQSHLTYELLSPDLNRNMEVMMARLEPGAASCDEPLAHP 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 E +VV+ G +++ + GE + G+ + + A + H + GE+ + F S I P+ Sbjct: 121 GEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQ 177 >UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium RepID=Q18AY1_CLOD6 Length = 183 Score = 175 bits (444), Expect = 7e-43, Method: Composition-based stats. Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N + L+ LRQ+ G SL + ++ TGVSKAMLGQIER ESSPTV+TLWKI++G Sbjct: 1 MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFK 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 + F+T ++ + + + + +V + ++P+ PQ FE F I++ Sbjct: 61 INFTTLLNENTNTYEVIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENCTHV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S+ H + E+V+VI+G+LDL VDG+ L G +RF + HIY+N + FH++ Sbjct: 121 SSTHSHVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKTIFHNIE 180 Query: 174 HY 175 Y Sbjct: 181 VY 182 >UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=D2BA96_STRRD Length = 192 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 11/188 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M +LA L +++LR RG +L ++A A VS +ML +ER + +PTV L +IA GL Sbjct: 1 MVDLA-ALGLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISE 113 V + ++ P+ V Q V L P P + FE + G + Sbjct: 60 VSLAELVAEPEDRRVIVRRAADQDTVDEPGGWHRSILTPVVPGVNFEWIRTTLPPGCDAG 119 Query: 114 STP-HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS- 171 P + +G E+VVV G L L V + L G+ FAAD H Y N G ++ Sbjct: 120 RFPAYAQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPCAYYVA 179 Query: 172 -LIHYPRS 178 LI PRS Sbjct: 180 ALIMRPRS 187 >UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHK0_EUBSP Length = 184 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME L + ++ LK++R+ +G SL + + T +SK+ML Q+ER E +PT++T++K++ GL Sbjct: 1 MERLNQIIAENLKEIRKGKGLSLEQASALTSISKSMLSQLERGEVNPTISTVYKLSLGLK 60 Query: 61 VPFSTF-------ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VP + F S + + +F + FE F ++ G + Sbjct: 61 VPVTAFTLDKPKPFSKTGKSEVVPLSGDDGRYRLYPIFNFRDGQDFEIFDLEFDEGGMMP 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G E + V GQL L L GE + A +IY+N G V ++ Sbjct: 121 GNRQMNGTREFITVYSGQLTLSFQDREYVLEAGEAASYNAFDDYIYKNTGTGMVTASIVV 180 Query: 174 HYP 176 HYP Sbjct: 181 HYP 183 >UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8D2_THECD Length = 187 Score = 172 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 11/184 (5%) Query: 1 MEN---LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIAT 57 M + + ++ T++ LR GWSL +LA GVSK +L +E+ +P + TL +I+ Sbjct: 1 MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60 Query: 58 GLNVPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASG 109 L VP + + + V+ P++Q ++ L + + E + ++ G Sbjct: 61 ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 S PH G E + V +G L + VDG+ + G FA D H Y N G F Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180 Query: 170 HSLI 173 + Sbjct: 181 VLTV 184 >UniRef50_C0C4F2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0C4F2_9CLOT Length = 183 Score = 172 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 59/183 (32%), Positives = 104/183 (56%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + ++ +++LR++ S+ L++ + VSK+ML QIER E++PT++TLWKI+ G+ Sbjct: 1 MDPMNMIVAKNIRRLREENKLSMEELSKLSSVSKSMLAQIERGEANPTISTLWKISNGMK 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 VPF P+++ V + Q ++ +FP D F + +++ G+ E Sbjct: 61 VPFDHLTVRPKTSYEIVNTSEIQPLLEDGGRVKNYPVFPDDENRRFAVYYLELDKGSYWE 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH KG E + + G +++ G+ T+ GE +RF AD TH Y+N G++T H +I Sbjct: 121 SEPHLKGTTEFITIFAGCVEISAGGQQFTVGRGESIRFRADSTHSYKNTGDETAILHMII 180 Query: 174 HYP 176 + P Sbjct: 181 YNP 183 >UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseudomonas RepID=Q880R5_PSESM Length = 212 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 8/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + ++ L++LR +R S+ LA TGVS+AML QIE S P++ L KIA GL V Sbjct: 26 DLIGPRVARNLQRLRSKRYLSMDALARLTGVSRAMLAQIESGRSVPSIKVLCKIAKGLKV 85 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAISE 113 + F+ + Q ++ +LFP+D E + I++ + Sbjct: 86 SIAAFLEDRAFEGVELLPAQHSKRLVSASGVFVSRALFPFDMARQSEFYEIRLGALGEEI 145 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H GV E++VV G L++ V+ E L+ G+ + F AD H YRN + ++ Sbjct: 146 SNGHGPGVQENLVVAQGVLEVSVNEERYLLSTGDSILFYADQPHRYRNPADSEALAFLVM 205 Query: 174 HYP 176 YP Sbjct: 206 TYP 208 >UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes RepID=D1YD37_PROAC Length = 258 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E LA + +KQ R R W+L +LA GVS+ +L +E+ +P V TL +++ L V Sbjct: 70 EPLAHAIGARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGV 129 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISE 113 + PP S P + Q A + T + +P E + +A + Sbjct: 130 GLPALVEPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAPSERHD 189 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H G E + V +G + + VDG L G+ + F D H Y N + + F + Sbjct: 190 SEAHSDGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARFSLTV 249 Query: 174 HYP 176 P Sbjct: 250 FEP 252 >UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia RepID=B2A1T2_NATTJ Length = 192 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 7/166 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + T+K+LRQ + L ++E TG+S +L QIER + ++ +LWKI+ L VP +F Sbjct: 15 IGETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGSFF 74 Query: 68 SPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 SV + + VI L D E + + SG + E Sbjct: 75 EELNREKVSVVRKEDRKQLDIPRSNVIYQLLSPDMNRKIEMLLVTLKSGEVEEHEKVTHE 134 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 E +VI G+L + V E TL G+ F + + H + N G++ Sbjct: 135 GEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEE 180 >UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2L3_9CLOT Length = 215 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E+L + ++ LK++R+ + SL + + T +SK+ML Q+ER E +PT++T++K++ GL Sbjct: 32 LEDLNQLIADNLKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLK 91 Query: 61 VPFSTF-------ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VP + F S A S + +F + FE F + G Sbjct: 92 VPVTAFTAPKPTPFSQTSKAEVSPLVSDDGRYRLYPVFSFRDGQDFEIFDFEFDEGGQMA 151 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G E + V GQL L L G+ + A +IY+N G+ + ++ Sbjct: 152 GNRQMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACIVV 211 Query: 174 HYP 176 HYP Sbjct: 212 HYP 214 >UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH7_9PLAN Length = 205 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 9/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + ++ LS +++LR++RGWSL L+ A GVS++ML QIER E++PT+A +I+ + Sbjct: 21 DEISGQLSQRVRELRKERGWSLDSLSAACGVSRSMLSQIERGEANPTLAVTVRISQAFGI 80 Query: 62 PFSTFISPP---------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + P ++ + + I +L P + E + +Q+ + Sbjct: 81 ALGELVEAPVSTSAIEVIRAEDRTFHYRSDDECRIRTLSPLHLEKDVEFYEVQLHANGKL 140 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 +S PH +G E + V G++ + + L G+ + DV H N G + Sbjct: 141 QSAPHFRGTREFLTVEKGKVQVNSGEDTTQLGPGDSASYRVDVPHAIMNIGRGEAVLFLV 200 Query: 173 IHY 175 + Y Sbjct: 201 VIY 203 >UniRef50_A1JM20 Putative DNA-binding protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JM20_YERE8 Length = 153 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 80/151 (52%), Positives = 98/151 (64%), Gaps = 8/151 (5%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYD--------PQQQAMVI 87 MLGQIER ESSPTVATLWKIA+GLNV FS F+ P + + +++ + M + Sbjct: 1 MLGQIERGESSPTVATLWKIASGLNVSFSQFLETPPAQSAALHRHGLLTTFNSETSGMRV 60 Query: 88 TSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGE 147 LFPYD L + F I + G SESTPHE GVIEHV+VI+G+L L VDG +TL GE Sbjct: 61 VPLFPYDATLRMDMFVIDLEPGGCSESTPHEAGVIEHVIVIEGELILTVDGVTRTLTTGE 120 Query: 148 GVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +RFAAD H YRN +V FH LIHYP + Sbjct: 121 ALRFAADCPHGYRNESGHSVRFHDLIHYPHT 151 >UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales RepID=Q1GDQ0_SILST Length = 187 Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats. Identities = 75/176 (42%), Positives = 105/176 (59%), Gaps = 6/176 (3%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 ++ L+++R G SLSR AE TGVSKAMLGQIER ESSPT+ATLWKIA G ++P + Sbjct: 3 DESITLNLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFHLPLT 62 Query: 65 TFISP---PQSATPSVYDPQQ--QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 I P + VY + ++ + +FPYDP L E F + + G ES PH+ Sbjct: 63 ALIEESTRPSGRSGEVYRTVEFPGSIAVKIVFPYDPSLGAETFHVSLKPGQSHESLPHDT 122 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 GV E V V++G++++ DG+W L G+G+RF AD H YR+ F ++ HY Sbjct: 123 GVTEEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA-FLNMHHY 177 >UniRef50_B4RY23 Transcriptional regulator, HTH_3 family protein n=2 Tax=Alteromonas macleodii RepID=B4RY23_ALTMD Length = 208 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 73/177 (41%), Positives = 104/177 (58%), Gaps = 5/177 (2%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 +++ ++ L+ +R RG SL + A+ TGVSKAMLGQIER ESSPT+ATLWKIATGL F Sbjct: 32 ISKSIAQHLQSVRTGRGLSLDKTAKLTGVSKAMLGQIERGESSPTIATLWKIATGLACSF 91 Query: 64 STFISPPQSATPSVYDPQ----QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 S+F+S ++A S + + I +LFP++ FE F + + S+ H+ Sbjct: 92 SSFLSGDETAPTSQHADDKFANDPNVTIKTLFPFNAVTQFEMFELCLKDFHEQHSSAHQI 151 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 GV EH+ V+ G+L + DG+WQ E AD H YR+ +T F +IHYP Sbjct: 152 GVTEHIHVLQGKLGVLQDGQWQAYQAQEQCILHADQPHGYRDEVGET-RFVVVIHYP 207 >UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces RepID=B5HZF0_9ACTO Length = 201 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 8/184 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++ L + L+ +K+ R +RG++L LA GVS+ ML QIE+ ++P++ T+ KI L Sbjct: 15 LDLLTQSLARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGDALG 74 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAIS 112 + +T + Q + +Q + + L + E + ++ G S Sbjct: 75 ISITTLLDYEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPGESS 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S PH G +E V V+ G+L L VDG + G F A+ H Y N G + Sbjct: 135 PSDPHPTGTVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGAVPMEMVMA 194 Query: 173 IHYP 176 + P Sbjct: 195 VSVP 198 >UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM Length = 183 Score = 165 bits (419), Expect = 6e-40, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME++ L ++ R + G SL LA+ +G++ +ML QIER+ +P++ TL IA L+ Sbjct: 1 MEDIN--LGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALD 58 Query: 61 VPFSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VP F + + + A + +L D + E + + G S Sbjct: 59 VPMFKFFKDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRGSIEFCMMSIPPGLTSG 118 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 P E E V+ G +++ V G L G+ +R H + N G V I Sbjct: 119 RNPQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFAI 178 Query: 174 HYP 176 P Sbjct: 179 TPP 181 >UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=B2T7X7_BURPP Length = 212 Score = 165 bits (419), Expect = 6e-40, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 9/175 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +++LR +R +L L+ A GVSK+ML +IER++++PT+A W++ L V + Sbjct: 35 VGEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSLF 94 Query: 68 SPPQSATPSVYDPQQQ---------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 +P ++ + + P + FE + + + G S HE Sbjct: 95 APQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIELAGKFEWYELTLQPGGALVSNAHE 154 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G EH+ V+ G +++ G + L + R+ AD H RN G+ ++ Sbjct: 155 PGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAVRNAGKGEAKALLVV 209 >UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5 Length = 208 Score = 165 bits (418), Expect = 7e-40, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 11/181 (6%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 +FL T ++ LR++RG +LS LA+ + ++ + Q+ERN + P++ L+ IA L V Sbjct: 27 QFLGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQW 86 Query: 66 FISPPQSATP----SVYDPQQQAMV------ITSLFPYDPQLCFEHFSIQMASGAISEST 115 F + P V +Q+ V I L P E + G S+ Sbjct: 87 FFASETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSK-E 145 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + E V+ G +L V + L+ G+ F++ H Y N GE+ +I Sbjct: 146 SYSHEGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITP 205 Query: 176 P 176 P Sbjct: 206 P 206 >UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLI4_HAHCH Length = 192 Score = 165 bits (418), Expect = 7e-40, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 13/183 (7%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L L ++QLR+ +L +LA+ + VS++ML QIER +++PT ATLW + + + Sbjct: 5 DLVARLGKRIQQLRKSEKLTLEQLAQQSNVSRSMLSQIERGQANPTFATLWNLTRAMGIE 64 Query: 63 FSTFISPPQ------------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA 110 +S + + + TP + +P Q ++ L P E + ++M Sbjct: 65 WSELVDESEGVSHSPIEHIIAAQTPKIDNP-QGGYHLSILSPPHLVGSIEWYELRMRPQG 123 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 ES H +G +EH+ V+ GQL++ + Q L G+ R+ ADV H +N G+ Sbjct: 124 KLESQAHTQGCMEHLTVLSGQLEVVSGTQSQRLAQGDTARYHADVAHTIQNPGDSDTIAL 183 Query: 171 SLI 173 ++ Sbjct: 184 LVV 186 >UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO Length = 207 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 8/181 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ ++ LR RGWS LA +GVSK ML QIE ++P++ TL ++A V Sbjct: 11 VTSAVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLCRVADAFGVSI 70 Query: 64 STFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISEST 115 + + P + +T V + ++ L E + +M G S Sbjct: 71 ARLLEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPDLVELWDWRMEPGEALRSP 130 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H G E + V+DG + VDG + GE V F AD H YR G+ V ++ Sbjct: 131 DHAHGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDGPVRLMMVVVT 190 Query: 176 P 176 P Sbjct: 191 P 191 >UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2 Length = 201 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 10/169 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L + ++ LR++R + RLAE GVS ++ QIER +P+ ATL ++A GL +P + Sbjct: 20 LGSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQMPIGQLL 79 Query: 68 SPPQSATPSVYDPQQQAM----------VITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 P+S + V +++ + L D E + G + +TP+ Sbjct: 80 EAPESKSVVVRKNERRRLDGHGLANDDGGSYELLTPDLNGALEATWVVTPPGYDTSATPY 139 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 E +V+ G D+ +DG L+ G+ +R+A+++ H Y N E Sbjct: 140 HHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETE 188 >UniRef50_C4Z9Q8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z9Q8_EUBR3 Length = 189 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 7/174 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L+ +S LK++RQ +G SL ++AE TGVSK+ML QIE+ ++P++ L KI +GL Sbjct: 3 MDYLSHNVSENLKRIRQSKGMSLDQVAEQTGVSKSMLAQIEKGTANPSIGVLGKITSGLR 62 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F I PP+ + + + FPY+ E + I + G + Sbjct: 63 IEFQRLIDPPRVDYALISPDDLVPTKELLGQYRVWTCFPYEDSREVEVYRIDVEPGGVYT 122 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 S H + E++ V DG L + Q ++ G+ +F D H+YRN G++ Sbjct: 123 SGGHGEKTREYLTVTDGVLTVECHDHVQEIHRGQVYKFETDQPHLYRNDGDRVA 176 >UniRef50_A9FKR7 DNA-binding protein n=2 Tax=Myxococcales RepID=A9FKR7_SORC5 Length = 186 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 4/179 (2%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 LA L+ +KQLR+ RG + +LA+ GV +A +E ++PT+ L + A L V Sbjct: 6 ELAGRLAKNIKQLREARGLTQQQLAKLAGVPRATWAHLESGAANPTLGVLHRAAAALQVS 65 Query: 63 FSTFISPPQSATPSVYDP----QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 +S P++ + + DP E I + G PH Sbjct: 66 IEEMLSAPRATCQLYARDALPTRSPGQALVRKLLPDPIPGMEMDRIAIPPGGRMTGVPHT 125 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 G E++ G+L L V GE L G+ F D H Y N G+Q +S++ R Sbjct: 126 PGTREYLTCESGELQLVVSGERFKLGSGDVAVFRGDQRHSYHNPGKQPAVGYSVVVLAR 184 >UniRef50_C5RJ85 Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ85_CLOCL Length = 182 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 6/181 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + +S +K++RQ+R +L LA TGVSK+ML +IER SPT++ L KI G+N Sbjct: 1 MISTSETISRNIKRIRQERNLTLDDLAILTGVSKSMLSEIERCTKSPTISVLEKICDGIN 60 Query: 61 VPFSTFISPPQSATPSVYDP------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 VP + + + + + LF + P FE F +A + +S Sbjct: 61 VPLAQLTHTEMPQVSVITNDTVKNYSAWKGFELFVLFEFSPDKKFEIFRHVIAPHSERKS 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 HE G+ E+++ G + + + L GE ++F A+ H Y N Q V+ L++ Sbjct: 121 ELHEAGIREYIICTKGVFSIQIGDKTFNLQEGEALQFLANCKHKYFNSTNQEVNIIMLLY 180 Query: 175 Y 175 + Sbjct: 181 H 181 >UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A23 Length = 178 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 6/173 (3%) Query: 10 TTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISP 69 T +++ R RG ++ +LA+ GVS ++ Q+ER + P++ T+ +IA L++P + Sbjct: 4 TRIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQE 63 Query: 70 PQSATPSVYDPQQQAMVITSLFPYD------PQLCFEHFSIQMASGAISESTPHEKGVIE 123 P T +V + + + E + G +S E Sbjct: 64 PDEETVAVIRHDDRYRISSPHHAITYTRASPGGAKLEVLEGVLEPGGVSSDELRSHPSEE 123 Query: 124 HVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 VVVI G+L + V + L G+ F + V H +RN G T F + P Sbjct: 124 CVVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPP 176 >UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYK9_9CLOT Length = 181 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 8/173 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ ++ LR+++ +L L+ TG+S + L Q+E N SS + +L KI+ L V + F Sbjct: 5 IAQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNINYFF 64 Query: 68 SPPQSATPSVYDPQQQAMVIT-------SLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 P+ V ++ I L P E + I S G Sbjct: 65 EIPEVNNFLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNFSHPG 124 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E V V++G L + +D + G+ + + + H + N +Q+V +++ Sbjct: 125 -EEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVL 176 >UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA Length = 210 Score = 162 bits (411), Expect = 5e-39, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 9/180 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + L T++ LRQ+ G S+ +A TG+S M+ Q+ER + P++ TL ++ L+V Sbjct: 20 DAVDQRLGETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDV 79 Query: 62 PFSTFIS--PPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAIS 112 P S F P + + + V+ D + E + + + GA S Sbjct: 80 PISYFFETTDPGDVQRYIVRKNSRRLLRLTASGVVKEALTPDGKGQLELYELTLNPGASS 139 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + + + ++ G L L +D + L G+ RF + V H++ N +Q + Sbjct: 140 GTDFLQHTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWV 199 >UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Burkholderiales RepID=B2UK31_RALPJ Length = 198 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 12/181 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L+ LRQ R SL L+ GVSK+ML Q+ERN ++PTVA LW++AT L V + F Sbjct: 16 AVGAKLQALRQARKLSLDELSRHAGVSKSMLSQVERNLANPTVAVLWRLATALGVSLADF 75 Query: 67 ISPPQSAT---PSVYDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAISES 114 +SP +A P VI S L P D FE + + + G + S Sbjct: 76 LSPESAADAAPAVTVIPAHSIPVIKSPDGKCELKILGPVDLAARFEWYELAIQPGGMLAS 135 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PHE G EH+ V++G + + + + GE R+ DV H N G+ ++ Sbjct: 136 EPHELGAKEHLSVLNGTVTVQSGPSEKKVRHGETARYPVDVQHAISNAGKTVATALLVVE 195 Query: 175 Y 175 Y Sbjct: 196 Y 196 >UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae RepID=A5IJD1_THEP1 Length = 188 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 8/173 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L++LR +G + LAE T +S++ + Q+E +++SP++ TL +I L F Sbjct: 15 IGEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKHFF 74 Query: 68 SPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 S + ++ + + L + + + GA +E + +G Sbjct: 75 SDVEEERVVFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEESYHEG 134 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E VI G++DL +D + L G+ + AD H +N G++ ++ Sbjct: 135 S-EFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNSGKKKAVLLWIM 186 >UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT Length = 201 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 9/182 (4%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R + ++ LR+ RG +L+ LA G+S +ML +ER E + TV L +IA L + Sbjct: 20 RAIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIAR 79 Query: 66 FISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAIS-ESTPH 117 + +V +Q +V + P P + FE + G + E PH Sbjct: 80 LVEDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGPH 139 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF-HSLIHYP 176 + E+++V++G+L L +DG L G+ + H YRN G T + ++I P Sbjct: 140 QADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLAMIERP 199 Query: 177 RS 178 R+ Sbjct: 200 RT 201 >UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMM2_9BACT Length = 182 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 9/178 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 T+K+LR + +L LA+ +G S + L Q+ER+ SPTVA+L KIA L V ++F Sbjct: 3 FGKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITSFF 62 Query: 68 SPPQSATPSVYDPQQQA---------MVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 S S T S+ + + +V SL + E + GA S + Sbjct: 63 SGDDSETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDDYNI 122 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+ GQ+++ +DG TLN G+ + ++V H ++N + + P Sbjct: 123 HLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTPP 180 >UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rhizobium RepID=B5ZXQ7_RHILW Length = 189 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 10/182 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L + + +++LR +G +L LA A+GVS+AM+ +IER E+SPT + L +I L + Sbjct: 3 EQLEQAIGIRIRKLRLDKGLTLDDLATASGVSRAMISRIERAEASPTASLLARICAALGL 62 Query: 62 PFSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 S F + + Q+Q + S+ + ++ +GA Sbjct: 63 SLSAFFAEEGEQAAPLARRQEQQVWRDPETGYLRRSVSAPGTASDVDIVEVEFPAGARVS 122 Query: 114 STPHE--KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 PH G+ +H+ + DG+L++ L G+ + H++ N G + Sbjct: 123 FPPHAASHGMTQHIWLFDGELEMTAGEAVYRLRPGDCLFMPVGEGHVFHNPGNAPARYCV 182 Query: 172 LI 173 ++ Sbjct: 183 VL 184 >UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771 RepID=UPI00019046BF Length = 280 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 13/185 (7%) Query: 2 ENLARF-LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 L R+ + +K LR ++ L +LA TG+S AML +IER + PT+ TL +IA Sbjct: 94 NELQRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFG 153 Query: 61 VPFSTFI-SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI-------- 111 V F + + +V +Q+ + + P FE A + Sbjct: 154 VGLDHFFKADKEEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFP 213 Query: 112 ---SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 S PH+ G E + V+ G+L + VDG+ L+ G+ + F + V H YR GE+ Sbjct: 214 IDSPPSEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSYRREGEEISS 273 Query: 169 FHSLI 173 +I Sbjct: 274 ALVVI 278 >UniRef50_B7IJ03 DNA-binding protein n=74 Tax=Bacillus RepID=B7IJ03_BACC2 Length = 190 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + + L+Q+R ++ SL LA TGVSK LG+IER E++PT+A +WKI GL++ Sbjct: 10 KEVIQQVGQLLRQIRNEQKLSLEELAHKTGVSKLTLGKIERGETNPTLAVIWKITKGLSI 69 Query: 62 PFSTFISPPQSATPSVYD-----PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 P S + + + + QA + ++F Y + E + S +I E Sbjct: 70 PLSRLMVVGEPVAVARCGEGFAVDEGQAWHLETMFRYTKETGMEMHRACLRSNSIYEPEA 129 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H +G IE V ++ G++ + V+ + LN + ++F A+ H+Y+N E+ H + Y Sbjct: 130 HHEGAIELVTIMKGKVSIQVENDVYELNEFDSIQFEANKKHVYKNEEEEVAVLHLTMKY 188 >UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2 Tax=Bacteria RepID=Q1AWJ9_RUBXD Length = 203 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 9/181 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ R + ++ LR++RG +L LA +GVS+AM+ ++ER E PT+ ++A GL V Sbjct: 11 EDAVRRVGERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGV 70 Query: 62 PFSTF--------ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS- 112 S + + + L P E + G+ S Sbjct: 71 SLSELAGERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSG 130 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E PH GV E++VV G+L + G L G+ + FAADV H + N GE ++ + Sbjct: 131 EFPPHRPGVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGECSYYLV 190 Query: 173 I 173 I Sbjct: 191 I 191 >UniRef50_Q6MKI2 Putative DNA-binding protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKI2_BDEBA Length = 188 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 9/184 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + LA+ L+ + +LR++R + + LA+ GV ++ L +E +P++ L K+ L V Sbjct: 5 DVLAQNLAAQITELRKKRQLTQAALAKLAGVPRSTLTNMESGMGNPSLVNLAKVCAALQV 64 Query: 62 PFSTFISPPQSATPSVYDPQQQA-------MVITSLFPYDPQLCFEHFSIQMASGAISES 114 F ++ P+S T + + A + + L P DP +++ GA Sbjct: 65 SFEELLATPRSQTKLIRKDEIPANKKAKGNVTVYKLLP-DPIPGMAIDRMELEVGARMGG 123 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PH G E++ + GQ+ + V GE L G+ + F D H Y N G S++ Sbjct: 124 IPHSSGTKEYLHCVQGQMTVVVSGESFELKPGDVLAFPGDSAHNYVNTGATKAIGLSVVT 183 Query: 175 -YPR 177 PR Sbjct: 184 MTPR 187 >UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales RepID=Q39Q24_GEOMG Length = 198 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 14/181 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L +++LRQ++ +L L+E +G+SK +L QIE ++ +P +ATL KI+ GL V F Sbjct: 15 LGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIHYFF 74 Query: 68 SPPQSATPSVYDPQQQ--------------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + V Q V SL P E F ++ + Sbjct: 75 EEEEDQQKLVLTRASQQTATRRRTGNDAPHGYVYRSLAPGIRHKPMEPFLVEFELTEWDD 134 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + + E + +++G+L+ + LN G+ + + + H Y + GEQ +++ Sbjct: 135 AFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGYVSVGEQKATAVAVL 194 Query: 174 H 174 + Sbjct: 195 Y 195 >UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZY56_OPITP Length = 204 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 8/180 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ ++ ++ + R ++ SL LA + VSK ML QIE+ + +PT+A + KIATGL V Sbjct: 21 EHSSQIIAKKILTERHRQKLSLGDLAVRSDVSKGMLSQIEQGKRNPTIAVMSKIATGLRV 80 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAISE 113 P + + V + ++ +L P D + E + + + Sbjct: 81 PLARLLPDDGPRVWRVIRANDENHILFDNDEHQLRTLSPIDLEKQVEFYELILHPHGKLV 140 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH +G E + V G + + + L G+ +AADV H N G + ++ Sbjct: 141 SDPHARGAEEILTVAKGHVQVKSGEKETELRRGDSAYYAADVPHAIVNLGNTEAVAYMIV 200 >UniRef50_B8EMC1 Transcriptional regulator, XRE family n=1 Tax=Methylocella silvestris BL2 RepID=B8EMC1_METSB Length = 206 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 9/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + +S L+ L Q++G S+ LA A+G+++ L + E++PT+ +WKIA L VP Sbjct: 19 DFGLSISERLRLLMQRKGRSIEALAAASGLARNKLDAVAAGEAAPTINLVWKIANALGVP 78 Query: 63 FSTFISPPQS--------ATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F + ++ + AT VY + L P+D + E + + +A ++ S Sbjct: 79 FGSLVAARKRGGNIVLRKATEKVYFSNDGRLTSRPLLPHDCKRLVEFYEMTIAPDYVARS 138 Query: 115 TPHEKGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G +E +VV+ G++ + V Q L G+ + F ADV H Y N G + ++ Sbjct: 139 EAHGAGTLESLVVVRGEVAIVVGKEASQRLKEGDAMTFEADVPHSYHNLGSTEALLYLVM 198 Query: 174 HY 175 Y Sbjct: 199 SY 200 >UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax=Idiomarina loihiensis RepID=Q5QYK8_IDILO Length = 191 Score = 158 bits (400), Expect = 8e-38, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 8/179 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ + R+Q G SL LA+ +SK ML QIE+ ++P++ L K+A L V Sbjct: 9 INEAIAKRVYTFRKQYGMSLDELAKNAEISKGMLVQIEKGRANPSIGILCKLANALAVSV 68 Query: 64 STFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCF-EHFSIQMASGAISEST 115 + ++ ++ PQ + + L E + M S Sbjct: 69 ADIVAVSDDPKVTIRQPQDIPTLWNGDHGGVARLLAGSKGTIMIELWRWSMFPKEQFVSE 128 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H KG IE + V G LD+ V+ E TL+ G+ + DV H Y+N + VHF ++ Sbjct: 129 AHSKGTIELIHVEGGCLDVLVNEETYTLSAGDSMTAEMDVAHTYQNSTNEPVHFTMTVY 187 >UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K52_SYMTH Length = 196 Score = 158 bits (400), Expect = 9e-38, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 5/170 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++Q R Q+G +L LAE +G+SK L Q+E +++SP++ L +++ GL VP + + Sbjct: 10 LGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVALLL 69 Query: 68 SPPQSATPSVYDPQQQAMV-----ITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 + V +Q ++ P + +++A GA + H Sbjct: 70 ISQEERAHVVRANARQGYSMNGEGLSVQLLSAPGRSLKMMLLELAPGAATGGDNHVHEGE 129 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E +V+ G + E LN G+ + + + H N G+Q + Sbjct: 130 ECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCV 179 >UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Clostridiales RepID=A3DDF7_CLOTH Length = 179 Score = 158 bits (400), Expect = 9e-38, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 64/176 (36%), Gaps = 8/176 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + ++QLR + LA+ +SK + QIE + +SP++ TL I L TF Sbjct: 3 IGAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKTFF 62 Query: 68 SPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 S + + + I + P + E + + G S H Sbjct: 63 SDSEDKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLED-HPHE 121 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V+ G +++ + E +N GE F + H N GE + P Sbjct: 122 GEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPP 177 >UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile RepID=Q186J9_CLOD6 Length = 187 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 71/185 (38%), Gaps = 9/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + + ++ LR+ + S+S LA+ + +S ++ QIERN P++ +WKI+ L+ Sbjct: 1 MYLMNIDVGSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALD 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAI 111 + F + + I + L P E + + Sbjct: 61 INIGYFFEEIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLSGKKIEFILVTLDGHTH 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S E +I G++ + + + L G+ F + + H+Y N ++ Sbjct: 121 KNSEFVTHEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVW 180 Query: 172 LIHYP 176 + P Sbjct: 181 AMTPP 185 >UniRef50_C9KMM8 Putative transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM8_9FIRM Length = 219 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 8/177 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L ++ L +R+ +G SL +AE TGVSK+ML IE+ ++P++ L KI +GL Sbjct: 36 MDYLVHNIAINLNHIRKAKGMSLDVVAEQTGVSKSMLAAIEKGAANPSIGVLGKIMSGLR 95 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + + P+ V + + + FP E + I + G Sbjct: 96 IELTDLTQSPRQDAYLVDVEKLTPTKDVAGEYRVWTCFPIADNHVVEIYRIDVEPGGTYR 155 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGE-WQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 S H + E+V V++G+L L + + T+ G+ RF+++ HIYRN G++ + F Sbjct: 156 SGGHGERTKEYVFVLEGELSLELANQKVYTIEAGQSFRFSSEEEHIYRNHGKEKISF 212 >UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter RepID=B8HGK7_ARTCA Length = 201 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 11/182 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 L + ++ +R+ RG +L+RL+E TG+S+A++ QIER ++P+ TL ++A GL++ Sbjct: 14 SELLATVGNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDI 73 Query: 62 PFSTFI-SPPQSATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQMASGA 110 P F QS +P V ++ I L D E I G Sbjct: 74 PVGRFFIGQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGH 133 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + +TP E +I G+ D+ +DG +L G+ + +++++ H Y+N E+ Sbjct: 134 DTSATPFTHSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAI 193 Query: 171 SL 172 + Sbjct: 194 WV 195 >UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMM9_9RHOB Length = 219 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 23/198 (11%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + L ++ LR+ R +L LAEATG+S + QIER ++ P+V L++I+ L Sbjct: 21 MSRVDPGLGEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALG 80 Query: 61 VPFSTFISPPQ-----------------SATPSVYDPQQQAM-----VITSLFPYDPQLC 98 V S F P+ + V +++A+ + L Sbjct: 81 VSVSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK 140 Query: 99 FEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHI 158 E S + A G+ ++ + E +V+ G L+L V L G+ F + H Sbjct: 141 LELLSCRFAPGSGVDTV-YAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHR 199 Query: 159 YRNGGEQTVHFHSLIHYP 176 YRN E + P Sbjct: 200 YRNPSETETIVIWALTPP 217 >UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus RepID=B8G9C1_CHLAD Length = 211 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 10/181 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LR+++ S+ LAEA+G++ L IE +SP+V+TL ++A L VP S F Sbjct: 22 VGKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPISAFF 81 Query: 68 SPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 +P VY P QA+ + L P E + + GA S Sbjct: 82 TPEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEAIIHT 141 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY---PR 177 E V ++GQ+ V + T+N G+ + F A + H + N G ++ PR Sbjct: 142 GQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHNPGSTPAQALLVLCPLELPR 201 Query: 178 S 178 S Sbjct: 202 S 202 >UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBJ6_9RHIZ Length = 213 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 9/179 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ + L+ LR++ G SL +LA +GVS+AMLGQIE +S+PT+ L +IA L V Sbjct: 22 LSIIVGENLRHLRRKSGLSLEQLAAKSGVSRAMLGQIETGKSAPTINLLGRIAEALQVSV 81 Query: 64 STFISPPQSATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + IS P + + + +LFP+ E + + + + + Sbjct: 82 PSLISHPAAGGTVIVPRDRATVLASSNGGFTCRALFPWGDPQSIEIYEVTIIAHHSEDVA 141 Query: 116 PHEKGVIEHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E GV + +VV+ G+++L + + L+ G+ + F AD H N G ++ Sbjct: 142 AFEPGVKKALVVLTGEIELTIAEDSPARLSEGDSIIFNADSPHTLHNPGNADAKAFLVV 200 >UniRef50_UPI00005895B5 truncated transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=UPI00005895B5 Length = 161 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 7/160 (4%) Query: 23 LSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSV----- 77 + +L++ TGVS + L +IE+ + P++ T+WKI+ GL + FS+ +S +S V Sbjct: 1 MEKLSKLTGVSTSSLNEIEKGNTIPSINTVWKISNGLKLSFSSLMSEAESDYVQVNKEDV 60 Query: 78 --YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLC 135 + FP++ FE F +++ GA +S PH G E ++++DGQL++ Sbjct: 61 VPVTEDDGKYRVYPYFPFEKSKSFEFFYVELDPGATLDSEPHLSGSEESIIIVDGQLEMH 120 Query: 136 VDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 ++ E L G+ +RF +D+TH Y N GE +I Y Sbjct: 121 LENEVIDLGKGDALRFKSDITHSYTNHGEDMTLISMVIDY 160 >UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepID=B6BEY2_9RHOB Length = 182 Score = 156 bits (395), Expect = 4e-37, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + ++ +++ R + G SLS LA G++K+ L Q+E +P+V TLW +A L Sbjct: 1 MSAPHQMIAAAIQRERNRAGKSLSALAAQAGIAKSTLSQLEAGNGNPSVETLWALAAALG 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISE 113 VP S +T + + + + L + + + + M G Sbjct: 61 VPLSLLFETEAPSTTLIRAAEGEPLESEQSDFTAVLLSRCPSNVRRDIYRVVMQPGEARR 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH +G +EH++V GQ+ DG+ L G+ + D H Y + F ++ Sbjct: 121 AQPHPRGTVEHMLVCSGQMRAGPDGQEDVLQPGDYYTYPGDRPHSYEAL-QADTLFLMVM 179 Query: 174 HYP 176 P Sbjct: 180 EAP 182 >UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVJ0_BEUC1 Length = 201 Score = 155 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 6/177 (3%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 L L+ LR+Q G +L +A TG+S A+L QIE + P++ +L K+A + +T Sbjct: 23 HVLGDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVAT 82 Query: 66 FISPPQSATPSVYDPQQQAMVITSLFPYDPQLC------FEHFSIQMASGAISESTPHEK 119 P + + + P ++ ++ + E +A G +S P Sbjct: 83 LFHEPDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGDLEVLRSVLAPGDVSAEGPRGH 142 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+ G++ + + L GE F + H YRN ++ P Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPP 199 >UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3B6_THELT Length = 185 Score = 155 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 82/183 (44%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + ++ LRQ + ++ LA+ +GV+ ++ QIE + SP+++TL I + L Sbjct: 1 MNSELDNIGEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALG 60 Query: 61 VPFSTFISPPQSATPS---VYDPQQQAMVITSLFPYD----PQLCFEHFSIQMASGAISE 113 + + V +++ ++++ Y+ + F + GA S Sbjct: 61 ETIISLVEQDVGDQIIKGIVRKEERRKVIVSPGLTYELLSSKNNAYSMFISYLEPGADSR 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + + IE +VI G++++ V + L G+ + + + + H ++N G T ++ Sbjct: 121 ESFYAHEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVWVV 180 Query: 174 HYP 176 P Sbjct: 181 SPP 183 >UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter RepID=C6E5F4_GEOSM Length = 199 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 16/184 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++ LRQ++ +L LA+ TG+SK +L QIE ++ +P +ATL KIA GL V F Sbjct: 14 LGEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIHYFF 73 Query: 68 SPPQSATPSVYDPQQQ----------------AMVITSLFPYDPQLCFEHFSIQMASGAI 111 + +Q + L P Q E F I+ A Sbjct: 74 EEAGDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEFEQRAW 133 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + +E V ++DG+L+ E L G+ + + + H Y + GE + Sbjct: 134 DNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVRARAVA 193 Query: 172 LIHY 175 +++ Sbjct: 194 VLYT 197 >UniRef50_D0LSP1 Transcriptional regulator, XRE family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSP1_HALO1 Length = 187 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 7/180 (3%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + L+ +KQLR+ RG S +++A+ G+ + +ER + +PT++ L + A L V Sbjct: 8 DTGAHLAHNVKQLREARGMSQAQIAKLAGIPRPTWSTLERGDGNPTLSVLLRAAAALQVS 67 Query: 63 FSTFISPPQSATPSVYD-----PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 ++PP++A ++ + + +L P DP + + A GA PH Sbjct: 68 LEELVAPPRAAARVYRKGSLTVRRRGRVTVENLLP-DPVPGLQLERMHFAPGAGMSGVPH 126 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT-VHFHSLIHYP 176 G E++ + G++ L G+ TL+ G+ V F D H YRN G Q + F ++ P Sbjct: 127 TAGTREYLCCMQGEVQLSAAGDSWTLSEGDVVVFRGDQKHGYRNPGAQPSLAFSVVVLAP 186 >UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KY58_9GAMM Length = 219 Score = 154 bits (391), Expect = 9e-37, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 11/183 (6%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 R L ++ LR+ RG +LS L++ + +S+ L Q+ER S P++ L I+ L V S Sbjct: 35 DRSLGLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALGVTIS 94 Query: 65 TFIS-----PPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISE 113 F + V + ++ L + E G S Sbjct: 95 WFFQNQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELLSPNLSRQIEMLKCTFPPGTSSG 154 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 P+ E +++ G+L+L ++ L G+ FA+ +H Y N + I Sbjct: 155 DVPYTHQGEEAGIILSGKLNLWIEDTHIVLEEGDSFAFASSKSHRYANLEDVETVVIWTI 214 Query: 174 HYP 176 P Sbjct: 215 TPP 217 >UniRef50_D2JL57 DNA-binding protein, putative n=1 Tax=Staphylococcus aureus RepID=D2JL57_STAAU Length = 182 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 8/180 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + ++T L+++R Q+ SL L++ T VSKA+L QIE+ ++PT++TLWKIA GLN Sbjct: 1 MEYINEIIATNLRKIRNQKRMSLDDLSKLTSVSKAVLFQIEKGTTNPTISTLWKIAEGLN 60 Query: 61 VPFSTFISPPQSATPSVYD------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 +P S I +SAT D + I S P E F I + + ES Sbjct: 61 IPLSNIIHKRKSATIVRKDETIPLNDNSNNVKIYSHIPC--YRNLEIFDIVLNKDGVLES 118 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 + H+ G E V + G++ + ++ E L E +RF ++V+H Y N G + + H Sbjct: 119 SGHDIGAEELVFIKVGKVKVTIENEEFILTENEILRFDSNVSHSYENIGSEECIVMIVNH 178 >UniRef50_A4C3V5 DNA-binding protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C3V5_9GAMM Length = 154 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 65/151 (43%), Positives = 81/151 (53%), Gaps = 8/151 (5%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQ--------QAMVI 87 MLGQIER ESSPTVATLWKIATG +P S F+ P + + I Sbjct: 1 MLGQIERGESSPTVATLWKIATGFTLPLSYFLLTPGQDSGVEVPDDAAFQIQRNLNDLQI 60 Query: 88 TSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGE 147 +L P+D FE F I + G S PH GVIEH+VVI G ++ ++ W L G+ Sbjct: 61 KTLLPFDSITRFELFQIVINPGYSHLSLPHNHGVIEHIVVISGAIEYLLNDNWLRLTAGQ 120 Query: 148 GVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +F AD H YRN +QT FH+LI Y S Sbjct: 121 VAKFCADQPHGYRNVTQQTAVFHNLIFYGES 151 >UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD Length = 197 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 11/171 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++Q R+ +G +L+ L++ +G+S +L QIER SSP++ ++ +I T L VP S Sbjct: 16 LGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPLSWLF 75 Query: 68 -----SPPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISESTP 116 P V ++ + V L D + + + + G S Sbjct: 76 DNGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGGEMQIYLVSIRPGGQSGPET 135 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 + E +V+ G L+L VD L G+ RF + + H + N G Sbjct: 136 YTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQA 186 >UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin sensor n=34 Tax=Burkholderia RepID=Q39C45_BURS3 Length = 286 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + +++LR++ +L +A +S L Q+ER+ + ++++L +A L+ Sbjct: 26 MDSDLMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISLSSLVNVAKALD 85 Query: 61 VPFSTFISPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISE 113 VP S I P+ A P ++ +++ L +QM G SE Sbjct: 86 VPLSALIDQPRQAQPDSHEGRRKPYALDARSQWYERLSTTFDGSQINALKVQMMEGYRSE 145 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G E V V+ G++ V + L+ G+ + F A H N G+ ++ Sbjct: 146 WVAH--GGDEFVYVLAGRICYTVGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 203 Query: 174 HYP 176 P Sbjct: 204 TLP 206 >UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7J9_9RHIZ Length = 205 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 13/187 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++ + L+ +R G L +A A S++ML ++E SP++ L +I LNV Sbjct: 18 DHNDVLIGARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNV 77 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFE---HFSIQ---------MASG 109 S +P + + + ++++ S + P L E + I +A G Sbjct: 78 NISGLFAPVEETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPG 137 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 A S+ +G E V++G L+L V + L G+ F + H YRN G+ Sbjct: 138 AASDGAIQHEG-EEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARV 196 Query: 170 HSLIHYP 176 + P Sbjct: 197 VWVNSPP 203 >UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales RepID=UPI0001B554B1 Length = 210 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 9/178 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L LR + G ++S LA A GVS+ ++ QIER +P+ TL K+A L VP F Sbjct: 31 LGRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFF 90 Query: 68 SPPQSA--TPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 + A +V + ++ L ++ G + PH Sbjct: 91 DGSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGRLGMMRAEIPPGYSNALAPHR 150 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E +++++G L + V G+ L G+ + + A V H + N G + + P Sbjct: 151 HEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPP 208 >UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJP6_9BACT Length = 178 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 75/173 (43%), Gaps = 5/173 (2%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS 68 L+++R++ +L +++ TG +K+ + QIE ++SP++A+L KI L S Sbjct: 4 GIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISELFE 63 Query: 69 PPQSATPSVYDPQ-----QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIE 123 ++ P +++ ++ L E I++ + + + E Sbjct: 64 DERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTDYYHHTGEE 123 Query: 124 HVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V++G + + + + L GE + F++++ H RN ++ + P Sbjct: 124 LGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTPP 176 >UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMV2_MOBAS Length = 193 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 13/187 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++ + + L+ +R SL +LA G S++ML ++E +PT+ L K+ L + Sbjct: 6 NSVPQDVGRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGI 65 Query: 62 PFSTFISPPQSATPSVYDPQQQ------------AMVITSLFPYDPQLCFEHFSIQMASG 109 + P V+ ++ +++ L P PQ E + G Sbjct: 66 NIAFLFEPQDEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPG 125 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 ++ G E V++G L V+G L G+ F ++ H YRN G++ Sbjct: 126 GSTDGAFSHVG-EEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARV 184 Query: 170 HSLIHYP 176 + P Sbjct: 185 LWVNTPP 191 >UniRef50_C9NG53 Transcriptional regulator, XRE family n=3 Tax=Actinomycetales RepID=C9NG53_9ACTO Length = 194 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 8/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + R L+ ++ R + G SL L VSK L +E+ + +P ATL ++A L + Sbjct: 5 DEALRTLARNVRAARTRAGLSLDELGRRAKVSKGALVGLEKAQGNPNFATLVRLADTLGI 64 Query: 62 PFSTFISPPQSATPSVYDPQ--------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 S + P V ++ + E + ++ G Sbjct: 65 SVSALLEGPAEGRVRVVSADAVMPLWAGERGSEARLMLTTSGPAPVEVWRWKLEPGEEYP 124 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH+ GV+E V V G++ L VDG ++ G+ F D TH YR G T H + Sbjct: 125 SHPHQAGVVETVSVTSGRMTLVVDGTEHSVEAGQTATFDGDATHAYRGSGSGTCHLIMTV 184 Query: 174 HYP 176 H P Sbjct: 185 HIP 187 >UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium RepID=A5TRU5_FUSNP Length = 184 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 11/180 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + LK+ R +G SL LA +S + L QIE+ ++SP++ L KIA L+V + I Sbjct: 3 IGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAYLI 62 Query: 68 SPPQSATPSV-YDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAISESTPH 117 + ++ + ++ I S L + + E ++ S + Sbjct: 63 EDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRDFY 122 Query: 118 EKG-VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 G E + +++G+L++ V + L+ G+ + F + + H ++N ++ V ++ P Sbjct: 123 SHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVSPP 182 >UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5V7_MAGSM Length = 183 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 6/176 (3%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++QLR QR + LA+ + +A L +E+++++P++A ++KIA L + Sbjct: 2 VNNLAGMRIRQLRSQRKLTQQALADMAEIPRATLATVEKDDANPSLAVVYKIARALGLSI 61 Query: 64 STFISPPQSATPSVYDPQQQ----AMVITSLFPYDPQLCFEHFS--IQMASGAISESTPH 117 + + V Q + A P F + +GA+ E PH Sbjct: 62 DQLLVTERERIQVVPADQMRWVETADGRYRAVVVSPGNALHFFQQIFSLQAGAVYEGRPH 121 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G E++ V++G L+L + GE + L G+ RF +V H YRN EQTV I Sbjct: 122 PPGSEEYLHVLEGALELELAGECKRLVKGDSARFGGNVLHQYRNPTEQTVRCLVTI 177 >UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Burkholderia multivorans RepID=A9ABP2_BURM1 Length = 281 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + +++LR++ +L +A +S L Q+ER+ + ++++L +A LN Sbjct: 1 MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISE 113 VP I P+ A P + ++++ L ++M G SE Sbjct: 61 VPLGALIDQPRQAQPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRSE 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G E V V+ G++ + + L+ G+ + F A H N G+ ++ Sbjct: 121 WVAH--GGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 178 Query: 174 HYP 176 P Sbjct: 179 TLP 181 >UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ Length = 203 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++++R + G +L LA+ +G+S L Q+ER++++P++ TL +A L V F Sbjct: 21 AFGERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVF 80 Query: 67 ISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 IS P+ A + ++ + V + P + + G SE T H Sbjct: 81 ISTPKPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLIVHIPVGYASEITAHV- 139 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 E +VV+DG + + L+ G+ + F D H + N G+ PR Sbjct: 140 -GEELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGTSPR 196 >UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales RepID=C0Z4P6_BREBN Length = 189 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 7/174 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + LK++R+++ SL L+E +GVSK LG IER E++PT+ LWKI+ L++P Sbjct: 15 VGGVLKKIRKEKHLSLEDLSELSGVSKLTLGNIERGETNPTIGVLWKISKCLSIPLLALF 74 Query: 68 SPPQSATPSVYDP------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 S S S + VI +F + E + + H Sbjct: 75 STENSVNLSRAGKGLRIAGDNKDWVIEPIF-QNVSNEIETCRAYLQPNSSYYPEKHHHNT 133 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E V+ G L + V+ E LN + + F AD TH Y N ++ V H ++ Y Sbjct: 134 TEIATVMSGTLSIHVNNESYVLNQYDSISFCADGTHSYINQSDELVVLHIILKY 187 >UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A8GBR8_SERP5 Length = 189 Score = 152 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 9/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E+ L+ L LRQQ+GWSL LA+ TG+S+A L ++ER E+SPT + L K+ + Sbjct: 5 LESADLRLAQRLSDLRQQQGWSLEELAQQTGISRATLSRVERAETSPTASLLNKLCSAYG 64 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVIT--------SLFPYDPQLCFEHFSIQMASGAI- 111 + S +S + P + +QQ + + S+ P E + +GA+ Sbjct: 65 LTMSRLLSEVEDEPPELLHREQQTVWVDRASGFHRCSVSPPAALYKAEFIECTLEAGAVI 124 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + P + H+ ++ G+L+L ++G L G+ +R+ + G + H+ Sbjct: 125 AYDAPSIHALEHHLWLLAGRLELTLEGRTFQLEPGDCLRYRLFGASKFHASGPEPAHYTL 184 Query: 172 LIHYP 176 +I P Sbjct: 185 VISRP 189 >UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae RepID=A6UHX0_SINMW Length = 193 Score = 152 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 13/184 (7%) Query: 2 ENLARF-LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 L R+ + +K LR ++ L +LA TG+S AML +IER + PT+ TL +IA Sbjct: 8 NELQRYAIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFG 67 Query: 61 VPFSTFIS-PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS------- 112 V F + + ++ +Q+ + + P FE + + Sbjct: 68 VGLDHFFNVDKEEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFP 127 Query: 113 ----ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 S PH+ G E + V+ G+L + V+G+ L+ G+ V F + V H YR+ G++ Sbjct: 128 VDSPPSEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEIST 187 Query: 169 FHSL 172 + Sbjct: 188 AIVV 191 >UniRef50_C9ZEI0 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZEI0_STRSW Length = 204 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 9/181 (4%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 ++ ++ LR+QRG SL+RLA G++K L +E+ +PTV TL+ IAT L VP + Sbjct: 6 NAVVARNVRLLREQRGLSLARLAREAGLAKQTLSNLEQGTGNPTVDTLFSIATALGVPVT 65 Query: 65 TFISPPQ-----SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMAS---GAISESTP 116 ++ + V + + + +L E++ +++ GA P Sbjct: 66 RLVAEREQVMTVQRGADVVWKEHEGLETRALDHVYGSGVIENYLVRVGPDRDGAGRPIEP 125 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 H G +EH+ VI G++ + L+ G+ VR+ D H+Y++ +++ H ++ P Sbjct: 126 HPVGTLEHLYVISGRVRVGPAESPVELDAGDFVRYPGDRPHVYQSLDGESLV-HIVVSVP 184 Query: 177 R 177 R Sbjct: 185 R 185 >UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO Length = 189 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 12/182 (6%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + L+T K+LR+ R WSL A+ TGVSK+ML +IER +SPT L K+A G + Sbjct: 1 MTAVLATRFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISI 60 Query: 64 STFISPPQSATPSVYDPQQQ---------AMVITSLFPYDPQLCFEHFSIQMASGAISES 114 S + + + V P+ + SL P Q F + + S Sbjct: 61 SQLVGGEELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSG 120 Query: 115 T--PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE-QTVHFHS 171 T PH GV E + V G+L L + E L G+ + + A V+H + N + + F Sbjct: 121 TFPPHRAGVEETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPSDSEPAVFFI 180 Query: 172 LI 173 +I Sbjct: 181 VI 182 >UniRef50_B2PVG1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PVG1_PROST Length = 185 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 5/179 (2%) Query: 1 MEN-LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGL 59 M+ + + ++ LRQ R SL+ LA +G+SKA L ++E +S+P V TL IA L Sbjct: 1 MDKKINIKIGQKVRLLRQARNLSLNELARLSGISKAALSKLESGDSNPRVDTLEAIAIAL 60 Query: 60 NVPFSTFISPPQSATPSVY--DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 P S + A P PQQ F + E + + M GAI S H Sbjct: 61 RFPLSDLFTLQHEAYPYFVKSAPQQGDYSQQFKFRINMGNISEIWQLNMKRGAIINSPAH 120 Query: 118 EKGVIEHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G EH+++ G L L + D + L G+ F+ D H Y E ++ ++ Y Sbjct: 121 MSGTHEHIMLHTGSLMLRLKDEQTVLLEEGDFYAFSCDFPHSYLCM-EGELNATVVMTY 178 >UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes RepID=A4J4T3_DESRM Length = 180 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 12/180 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + ++ LR Q+ +L L+E TG+S + L Q+ER SS + +L KIA LN Sbjct: 1 MEEIF----EKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALN 56 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVIT-------SLFPYDPQLCFEHFSIQMASGAISE 113 V ++F + + + +Q++ I L E + A G + Sbjct: 57 VHIASFFANYSNTNFTTRADEQKSFKIEGSSTEYIRLSGEFHGRNLEPLLVTFAPGQVQP 116 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 +T G E V++G + VDG+ + G+ + F + + H + N +Q ++ Sbjct: 117 NTFCHPG-EEFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVL 175 >UniRef50_B1HMP7 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HMP7_LYSSC Length = 194 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 10/179 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L+++R+ + SL LA + VSK LG+IER E++PTV LWKI GL++P Sbjct: 17 DLFSQVGMNLREIRKNKRMSLEELASVSNVSKLTLGKIERGETNPTVNILWKICRGLHIP 76 Query: 63 FSTFISPPQSATPSVYDPQQQ------AMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + +S ++ + + Q + LF + E + ++ + S Sbjct: 77 LISLLSFEENVEVHRFGSEYQFAGHNNDWFVEPLFKTN---GTEWYRGRLDPNSEY-SEC 132 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H G E V+V++GQL+L V + LN + ++F + H Y N ++ +H + Y Sbjct: 133 HLAGSEEVVLVLNGQLELKVGEKTHLLNQWDVIKFKGEELHTYINHSDEKIHLMLSLTY 191 >UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGC0_BREBN Length = 185 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 7/184 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + ++ +R++RG++L +A TG+SK +L Q+ER S P++ +LWKI L Sbjct: 1 MRLPIETIGHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALE 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVI-------TSLFPYDPQLCFEHFSIQMASGAISE 113 P F V Q++ ++ SL +++ G ++ Sbjct: 61 SPIIHFFEDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAKLGMLEVRLMPGEMAV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + E VI G + + E L G+ + F + TH N GE + Sbjct: 121 DKFVQSEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWSV 180 Query: 174 HYPR 177 + P+ Sbjct: 181 NPPQ 184 >UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132 Tax=Proteobacteria RepID=A0KZV5_SHESA Length = 208 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 11/180 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M NL + +L+ +R+ +G S LA+ GV+ + + IE+N SP+V++L K+ +G+ Sbjct: 24 MRNLD--IGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIP 81 Query: 61 VPFSTFIS---PPQSATPSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + F S +S VY + + + P S G+ Sbjct: 82 MSLVDFFSIEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSD 141 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + + E +VI+G+ +L V E L G+ F +++ H +RN ++ S Sbjct: 142 TGEEMLKHEGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVS 201 >UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=Desulfobacteraceae RepID=B8FLW0_DESAA Length = 184 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 4/172 (2%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS 68 + LR+ + L LA TG++ L +IE E+ P+V +L +IA L V + F+ Sbjct: 13 GQRIHDLRKDKDMDLETLANETGLAVDTLEKIESGENMPSVGSLLQIARALEVDSAFFLE 72 Query: 69 PPQSATPS----VYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEH 124 T Y + T+L P + F I++ + ++ E Sbjct: 73 KEVKTTKKGLAKAYSERTSHYAYTTLSPGARHKHMKAFKIEIPPKQEHDGVSYQHEGEEF 132 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V V+ G++++ V L G + F + + H+ +N GE +++ P Sbjct: 133 VYVLSGKVEVTVGEHVNKLEEGGSLHFNSGLRHLLKNPGEDAALLLVVVYTP 184 >UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH Length = 181 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 8/173 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ ++ LR+++ +L L+E TG+S + L Q+E N SS + +L KIA LNVP + F Sbjct: 5 IAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPITYFF 64 Query: 68 SPPQSATPSVYDPQQQAMVIT-------SLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 P+ V +++ + L + E + + + G Sbjct: 65 KSPELHKFLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPAEKQHGHKFSHPG 124 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E + V++G + +DGE +N G+ + F + + HI N + +++ Sbjct: 125 -EEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVV 176 >UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium RepID=B1M8P3_METRJ Length = 202 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 9/179 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ +++ R+++G SL LA +GVS++M+ +IER+E+ P+ L ++A L V FS + Sbjct: 22 IAEEIRRRRREQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGVTFSRLM 81 Query: 68 SPPQSAT--------PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS-ESTPHE 118 +P + + + + P P + + GA + E T H Sbjct: 82 APATEREILLIPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTGEFTAHR 141 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 +GV E++ V+ G+L + + G+ + F AD H + N G + + +I R Sbjct: 142 RGVSEYIYVLRGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEACEYFLVIDPSR 200 >UniRef50_B8IHD2 Transcriptional regulator, XRE family n=13 Tax=Alphaproteobacteria RepID=B8IHD2_METNO Length = 218 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 9/179 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ L T+++LR+ SLS LAE +GV+K+++ QIERNE++PT+AT+W+++ L+V Sbjct: 32 LSGQLGKTIQRLRKAYNLSLSELAEQSGVAKSIISQIERNETNPTLATIWRLSQALDVSI 91 Query: 64 ST---------FISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 FI A + + + + + + + G +S Sbjct: 92 ERVLATGDEEPFIEKSSRADTPILVSEDGKVKLAITGWIKTVEWLQWYDVTAEPGGELDS 151 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H++G +E + V++G+ ++ V G Q + GE +R+ D H R +QT ++ Sbjct: 152 DAHQRGSVECLSVLEGEFEVEVAGAVQRVKTGETLRYRCDRPHTVRCISDQTARATMVV 210 >UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae RepID=Q5LWB9_SILPO Length = 193 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 10/180 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + T +++LR+ RG +L +LA ATG+S L Q+ER + P+V L I+T L V + F Sbjct: 12 IIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINWF 71 Query: 67 ISPPQSATPS----VYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISESTP 116 P + + V ++ V L + E GA S + Sbjct: 72 FPDPDTVSDPEADLVVRADRRRTLRFSSGVRDELISPNLSGQLELIVTTFDPGAGSGAEL 131 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + E +++GQL++ V TL G+ V+FA+ + H Y N G + P Sbjct: 132 YAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGPGRTVMIWAVTPP 191 >UniRef50_C2LK61 Transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK61_PROMI Length = 192 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 4/175 (2%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 +L +KQLRQ R SL+ L+ +G+SKA L ++E +S+P + TL IA L P Sbjct: 10 NEYLGNKVKQLRQSRNLSLNELSRKSGISKAALSKLESGDSNPRIDTLEAIAIALGFPLG 69 Query: 65 TFISPPQSATPSVYD--PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 S + P + P F E + I+M GAI S H G Sbjct: 70 DLFSFTREEYPRLERHKPIVGDYAQEFKFRIGIGNITEIWHIEMKHGAIINSPAHADGTQ 129 Query: 123 EHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EH++V G+L + + E L G+ F + H Y E + ++ P Sbjct: 130 EHIMVYSGKLMMRFANDETVLLETGDFYAFHGNAPHSYICV-EGHMRASVIMSSP 183 >UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Proteobacteria RepID=Q12BT0_POLSJ Length = 207 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L ++ ++ LR R SL LA GVS++M+ IER ESSPT L K+ATGLNVP Sbjct: 15 SLNDRIAQRVRDLRAARSLSLDALATHCGVSRSMISLIERGESSPTAVLLEKLATGLNVP 74 Query: 63 FSTFISPPQSATPSV--------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI--S 112 ++ PQ V + V ++ P + + + A Sbjct: 75 LASLFEAPQPTKDPVARLADQPSWRDPHSGYVRRNVSPSGVASPIQIVEVSFPAKARVAY 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E+ E + + V V++G +++ V + L G+ + D Y N +T + + Sbjct: 135 ETGAREAQIHQQVWVLEGSIEVTVGDDQHRLGTGDCLALVLDRPVSYHNPTRKTARYAVV 194 Query: 173 IHY 175 I Sbjct: 195 ITT 197 >UniRef50_A7MK95 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK95_ENTS8 Length = 199 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 8/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +++L+ L+ LK R++ +L L++ GVSK ML ++E+ ++P++A L K+A L Sbjct: 8 VDSLSVALAQKLKAWRKEHKVTLDALSQRAGVSKGMLVELEKAAANPSIAILCKVAAALG 67 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLC--------FEHFSIQMASGAIS 112 + + + + + Q ++ T +L E + ++ G + Sbjct: 68 LSVADLLDVASQPAARLIEATQIPVLWTGDHGGTARLLAGTSGPNMVELWRWELQPGDVF 127 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S H +G E + V G L L V+ E +N G D H Y N ++T+ F Sbjct: 128 TSPGHPQGTSELLHVERGVLTLDVNDEVLKVNAGASAVARTDAPHRYANEQQETLIFTMT 187 Query: 173 IHYPR 177 +H P Sbjct: 188 VHEPH 192 >UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzia RepID=B9R695_9RHOB Length = 183 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 11/185 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L+ L LR+ +G SL LAE +G+S+A L +IER ++SPT A L ++AT Sbjct: 1 MND--QDLAQRLIGLRKTKGLSLDELAEKSGISRATLSRIERGDTSPTAAALGRLATAFG 58 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGA-I 111 V + +A + +QA+ S+ P + +GA I Sbjct: 59 VSVADLFGLGAAAHDAKLAQNEQAVWRDPETGFQRRSVSPAISGFRGSVIEGTLPAGAII 118 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + P + H+V++ G L + + L+ G+ +RF + + Y G + + Sbjct: 119 SYAAPPLPDLEHHLVLLSGALTVVLGDTRHDLSPGDCLRFRLNTPNAYHATGSKPARYLL 178 Query: 172 LIHYP 176 + P Sbjct: 179 TVITP 183 >UniRef50_A4FBL3 Transcriptional regulator, Cro/CI family n=2 Tax=Actinomycetales RepID=A4FBL3_SACEN Length = 194 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 8/179 (4%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R ++ ++ R + G SL L VSK L +E + +P +ATL ++A L V S Sbjct: 9 RTVAHNVRAARVRAGLSLEELGRRAQVSKGALVALENAQGNPNLATLVRLADTLGVSVSA 68 Query: 66 FISPPQSATPSVYDPQQQAMVITSLFPYDPQLCF--------EHFSIQMASGAISESTPH 117 + P V A + T + +L E + ++ S PH Sbjct: 69 LMQGPPEGRVRVVAADAVAPLWTGERGGEARLVLTTSGSAPVEVWRWRLEPDEEYPSHPH 128 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + GV+E V V G++ L VDG + + G+ F D H YR G +T H +H P Sbjct: 129 QAGVVETVSVTSGRMVLVVDGVERVVEAGQTATFDGDAPHAYRGSGTETCHLIMTVHLP 187 >UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter sphaeroides RepID=B9KL60_RHOSK Length = 211 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 11/179 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + L+Q+R+ SLS L+E +GVS L Q+ER P++ T+ +I+ L VP Sbjct: 2 NSNHLIGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVP 61 Query: 63 FSTFISPPQSATP----SVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + P P + Q + + +L + ++ M G+ Sbjct: 62 PFWLLEMPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFDAMQLMTVVMEPGSK 121 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 S + + I+ ++ G L+L VDG L+ G+ F + + H + N G Sbjct: 122 SGAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAEVL 180 >UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1 Length = 236 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 15/185 (8%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N L + ++ LRQ+ +L A A G+SK L Q+ER +SP++ +L IA L V Sbjct: 55 NAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALGVT 114 Query: 63 FSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 F+ P Q A + L E ++M G Sbjct: 115 VQYFVETPSEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQKRSEV 174 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH- 174 E + VI+G++ L ++G+ L+ G+ + + V H + N T S++ Sbjct: 175 T-THAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVN----TAKIESVVVW 229 Query: 175 --YPR 177 PR Sbjct: 230 VGTPR 234 >UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7 Tax=Rhodobacteraceae RepID=Q28QP9_JANSC Length = 205 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 9/176 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 N L +++ R+Q +L L + G+S L Q+ER +++P++ TL +IA GL+V Sbjct: 6 SNNDPALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSV 65 Query: 62 PFSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 FI+ P+ A + +++ S+ P + + + G SE Sbjct: 66 ELEYFIATPKPADSLSRGGARPQFSIDGSSILYESVGADFPGAELSCYILHVPPGYASEV 125 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 E + ++ G++ + G+ L G+ + ++ H + N + T Sbjct: 126 V--HHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRIL 179 >UniRef50_C9Y4D6 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=C9Y4D6_CROTZ Length = 199 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 8/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +++L+ L+ LK R++ +L L+ GVSK ML ++E+ ++P++A L KIA L Sbjct: 15 IDSLSVALAQRLKSWRKEHNVTLDTLSRRAGVSKGMLVELEKAAANPSIAILCKIAAALG 74 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLC--------FEHFSIQMASGAIS 112 + + + + + Q ++ T +L E + +M G Sbjct: 75 LSVADLLDVASQPAARLIEASQIPVLWTGDSGGTARLLAGTSGPSMVELWRWEMRPGERF 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S H +G E + V G L L V+ E +N G D H Y N + T+ F Sbjct: 135 TSPGHPQGTAELLHVEQGILTLSVNDERLHINAGASAVARTDAPHGYANEHQATLIFTMT 194 Query: 173 IHYPR 177 ++ P Sbjct: 195 VYEPH 199 >UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHE5_SYNFM Length = 204 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 15/181 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +++LRQ+ +L LA TG+SK L QIE N+ P VATL+++A L V F Sbjct: 18 IGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALGHFF 77 Query: 68 SPP-QSATPSVYDPQQQA--------------MVITSLFPYDPQLCFEHFSIQMASGAIS 112 + ++ +++ + T+L E F ++ + Sbjct: 78 QESVEDDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEFPTQEKE 137 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E E + V++GQ++ +TL+ G+ + ++++H +R G +T ++ Sbjct: 138 EMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETARALAV 197 Query: 173 I 173 + Sbjct: 198 V 198 >UniRef50_Q1R147 Transcriptional regulator, XRE family with cupin sensor protein n=24 Tax=Proteobacteria RepID=Q1R147_CHRSD Length = 190 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 6/178 (3%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 ++ ++ +++LRQ S LAE GVS+ ML IE+ + + +++TL ++A L V Sbjct: 13 DVLVHVAANVRRLRQGASLSQQALAERAGVSRRMLVNIEKGDVNVSLSTLDRLAEALGVL 72 Query: 63 FSTFISPPQSAT----PSVYDPQQQAMVITSLFPYDPQLC-FEHFSIQMASGAISESTPH 117 F + PP S V + L P E +S M G ES Sbjct: 73 FYALVQPPGSEDSARIDEVAWVGRFPDSHARLLASKPARQEVELWSWSMEPGESYESVAD 132 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH-SLIH 174 G E +VVI+G L L + T+ G+ + +D H YRN G + F +++H Sbjct: 133 GTGWHEMLVVIEGTLTLELADHEVTIEAGDFHVYPSDQFHRYRNEGTGRLRFIRNVVH 190 >UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=Euryarchaeota RepID=Q468H3_METBF Length = 192 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 78/192 (40%), Gaps = 17/192 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M R + + ++QLR+ R ++ LAEA+ S+ ++ Q+E P++ L KIA L Sbjct: 1 MSEENR-VGSKIRQLREAREMTIEELAEASQSSEELIQQLENGALVPSLTPLLKIARALG 59 Query: 61 VPFSTFISPPQSATPSVYD----------------PQQQAMVITSLFPYDPQLCFEHFSI 104 V TF+ + P + P++ A+ SL E F I Sbjct: 60 VRLGTFLDDMPQSGPVIVRAGLSDNVVRFSGKTEKPRKSALEFYSLASDKADRNMEPFII 119 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + E + ++ G++++ + LN G+ + + + + H G+ Sbjct: 120 DIHPSPDESHQLSSHEGEEFIYILSGEIEIFYGKDVHRLNAGDSIYYDSIIPHDVHAAGK 179 Query: 165 QTVHFHSLIHYP 176 + ++++ P Sbjct: 180 EDAKILAVVYAP 191 >UniRef50_C1B633 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1B633_RHOOB Length = 208 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 8/175 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++ RQ R SL LA ++ VS++ML IE PTV L +IA L V S Sbjct: 27 ALGARIRTERQLRRLSLEDLARSSEVSRSMLSAIELGAKVPTVLVLDRIAVALGVSVSRL 86 Query: 67 ISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAIS-ESTPHE 118 + + Q +V + P L FE ++ + E PH Sbjct: 87 LDEEREGRAIHLPVAAQRVVSDAAGWRRKITSPVVHGLDFETGRLEFDPLVDAGEFAPHH 146 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 KG IEH+ V GQL++ + G+ L G+ + F +DV H +RN G ++ Sbjct: 147 KGWIEHITVERGQLEITLAGQAYLLGEGDALYFESDVIHAFRNPGRSKTVAFIVM 201 >UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BB48_9RHOB Length = 218 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 13/178 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LRQ + L++L E TG+S AML +IER + PT+ATL +IA V F Sbjct: 31 IGPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGLDHFF 90 Query: 68 SPPQSATPSVYDPQQQA------------MVITSLFPYDPQLCFEHFSIQMASGAISEST 115 P + A Q+ + SL + F+ + + SG SES Sbjct: 91 GPGEDAPVLEIVRQRDRLKLGDKTSGPLSYLFESLDFPVTKSRFQSYLAEF-SGNGSESM 149 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 PH E + VI+G L+L + G + L+ G+ + F A H YR Q ++ Sbjct: 150 PHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVPGQRCRALVVV 207 >UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0D911_9RHOB Length = 205 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 11/176 (6%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 L L+ LR+ G SL L+ +S L QIER+ SSP+V TL K+AT +VP S Sbjct: 22 DSTLGLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLATSFDVPLS 81 Query: 65 TFISPP----------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F + P + T D Q + L P + ++M + S Sbjct: 82 YFFADPAADEVDGIVIRRDTGHEMDVSAQGIRKHLLTPKALD-GLQLMMVRMTPESSSGP 140 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + ++ V+ G + L V+G L G+ F + H + G Q Sbjct: 141 EAYGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRFECVGTQPAEVL 196 >UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Tax=Alphaproteobacteria RepID=B2S813_BRUA1 Length = 650 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 6/176 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N A + L +LR++RG +L LAE + +S+A + +E +P + TLW +A L Sbjct: 1 MSNSAE-IGMNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + F + D ++ P E F + + + A + H G Sbjct: 60 IEFGELVGARNDVEVVEADGISVRLIDRQTRP----RTVEAFLLDLPANAKRHADAHVHG 115 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V E+VVV+ G + + L+ G+ +FAADV HIY + G + I YP Sbjct: 116 VSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSS-GAEPSRAIVTIIYP 170 >UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Acinetobacter RepID=B2HYY3_ACIBC Length = 197 Score = 148 bits (375), Expect = 8e-35, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 12/185 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+++ ++ +++LR RG++L LA VS++ + IER E+SPT L K+A GL Sbjct: 1 MDDINIRIAHRIRELRLARGYTLDVLAARCQVSRSAISLIERGETSPTAVVLEKLANGLE 60 Query: 61 VPFSTFISPP---QSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGA 110 VP + + S+ P + +Q + ++ P + +L F+ I+ + Sbjct: 61 VPLTQIFTNEAGNSSSQPLIRRNEQAEWRDPETGYIRRTVSPPNLKLPFQIVEIEFPPHS 120 Query: 111 I--SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 E+ + V + + V++G++++ + L G+ + D IY N Q Sbjct: 121 RITYETNESSRVVQQQLWVVEGKIEIQLGETSYALGQGDCLAMQLDQPVIYSNHSAQVAR 180 Query: 169 FHSLI 173 + ++ Sbjct: 181 YILVV 185 >UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWJ8_9PLAN Length = 183 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 12/175 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 LS ++++R G +L LAE TG+++ ++ +IE +P++ TL KIA V + + Sbjct: 6 LSQRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTADLL 65 Query: 68 SPPQSATPSVYDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASG-AISESTPH 117 + V +++ IT L E +++ G E H Sbjct: 66 AGLDQRPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEIQPGKGRDEKLAH 125 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E E V+V+DG ++ E L G+ + V H RN G + Sbjct: 126 E--GEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVV 178 >UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2 Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ Length = 182 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L L+ LKQLR RGWSL +LA+ +GVS++ L +IE E SPT TL +++ Sbjct: 1 MDTLNDRLADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQ 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGA-I 111 + S ++P ++ + ++Q+ + P L E + I Sbjct: 61 MTISQLLAPVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQII 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + P + G H+V+++G L + + E L G+ +R+ ++ G + + Sbjct: 121 SYAGPSKPGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLIM 180 Query: 172 LI 173 L+ Sbjct: 181 LV 182 >UniRef50_D2PZI7 Transcriptional regulator, XRE family n=2 Tax=Actinomycetales RepID=D2PZI7_9ACTO Length = 200 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 10/178 (5%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R L L+ R ++G SLS LA +G++K L Q+E +PT+ T++ ++ L VP S Sbjct: 12 RVLGVNLRARRDEQGISLSELARRSGIAKGTLSQLESGAGNPTIETVFSLSNALGVPVSA 71 Query: 66 FISPPQSATPSVYDPQQQ------AMVITSLFP-YDPQLCFEHFSIQMASGAISESTPHE 118 +S P ++ + A+ + L +P FE + ++ G + ST H Sbjct: 72 LLSEPPASDLVLVRSADTDVLSGAAVDLRMLRRLENPGSLFEIYDQRIRPGKVQHSTGHP 131 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EH VV+ G++ + Q L G+ + F AD H Y + V L+ YP Sbjct: 132 --GTEHHVVLTGRVRITARDRSQELGPGDYLAFRADAPHEYEAL-DGEVRSVLLLEYP 186 >UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL Length = 189 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 10/178 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +K+LR + +L L+E T +S L Q+ER ++ + +L KIA L+V + F Sbjct: 5 IGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSLTYFF 64 Query: 68 SPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISES-TPHE 118 P+ V ++ + +L F I++ E+ ++ Sbjct: 65 QAPKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEILPTDSKENIISYQ 124 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V++G L L ++ + + L G+ + + + H + N + V ++ H P Sbjct: 125 HKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTV-HTP 181 >UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ Length = 274 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 13/180 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + LK LR+++G +L +++ TGVS + L +IE + + ++ATL K+AT F Sbjct: 96 AVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNLLYF 155 Query: 67 ISPPQSATPSVYDP--------QQQAMVITSLFPYDPQLCFEHFSIQMASGAIS-ESTPH 117 + + ++ + + L + + E +A GA E+ H Sbjct: 156 FEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTALN-EPAMEPLLYTVAPGAGRNENISH 214 Query: 118 EKGVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E E V V+ G L++ +D E + G+ + F + H +RN G++ + + P Sbjct: 215 E--GEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTPP 272 >UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31672 Length = 196 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 12/179 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + + ++ LR+ SL LAE +GVS ML Q+ER E+SPT+ +IA GL++ S Sbjct: 11 AIGSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQL 70 Query: 67 ISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISESTP-- 116 + + ++ Q++ +S L P P E + G + Sbjct: 71 LRLDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGDP 130 Query: 117 --HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 HE G E ++ G++ L DG L+ G+ V F AD+ H + N G + +++ Sbjct: 131 PVHEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVV 189 >UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=A9ALB0_BURM1 Length = 193 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 15/183 (8%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 A L + ++ LRQ+ +L A A G+SK L Q+ER +SP++ +L IA L V Sbjct: 14 AAALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQ 73 Query: 65 TFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 F+ P Q A + L E ++M G Sbjct: 74 YFVDTPSEERSVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVT- 132 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH--- 174 E + V++G++ L ++G+ L G+ + + V H + N T S++ Sbjct: 133 THAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWAN----TAKIESVVVWVG 188 Query: 175 YPR 177 PR Sbjct: 189 TPR 191 >UniRef50_C8WYG8 Transcriptional regulator, XRE family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYG8_ALIAD Length = 201 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 3/176 (1%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ + +S L+ LR RGWS+S L +GV+K + Q+E +PTVATLW +A+ L+VP Sbjct: 14 NIMKIVSNNLRALRLARGWSISELERRSGVAKGTISQLESGYGNPTVATLWSLASALSVP 73 Query: 63 FSTFISPPQSATPSVYDP--QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 FS I + P + + + + E + + ++ S H G Sbjct: 74 FSDLIQTAKETESVHESPVLAEPSGTTRFVDRVTMEGMIEIYEMVLSKDDERVSEAHPLG 133 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 ++EH++V+ G++++ G+ LN G F V H+YR+ ++ + YP Sbjct: 134 IMEHILVVQGRMEVGPIGQEIALNPGSYTTFPGYVRHVYRSL-DEEARAVLWLVYP 188 >UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMB1_VEREI Length = 208 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 14/188 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + +++LR + G ++++++E G+S+ ML +IE + + TL +IA L V Sbjct: 20 LEESVGAAIRELRLREGLTIAQVSEQAGISRGMLSKIETGSTMAGLDTLARIARTLGVAM 79 Query: 64 STFISP-----------PQSATPSVYDPQQQAMVITSLFPY--DPQLCFEHFSIQMASGA 110 S + A V ++ L Y P FE F I MA + Sbjct: 80 SALFGKYDASAAMAQHVKRGAGMEVVRRGTKSGHSYHLLAYGQGPVKWFEPFLITMADDS 139 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + G E + +++G ++ + L G+ + F H N + + F Sbjct: 140 QRYPSFQHPGT-EFLYMLEGVIEYRCGQQTYVLEPGDALSFDGQALHGPENLMQCPIRFL 198 Query: 171 SLIHYPRS 178 S+I YPRS Sbjct: 199 SIIIYPRS 206 >UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJV6_DESAH Length = 190 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 19/189 (10%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + +S +K+ R + +L LA+ TG++K L ++ER++ +P +TL KIA L Sbjct: 1 MDE--KIISVNIKRFRTSKRLTLQELADRTGLTKGYLSKVERSQKAPPYSTLSKIAAALE 58 Query: 61 VPFSTFIS----PPQSATPSVYDPQQQAMV----------ITSLFPYDPQLCFEHFSIQM 106 V +T +S P++ + Q+ ++ L P E F I Sbjct: 59 VEITTLLSQGIDSPKNVPLCLSRKAQRTLIPGTEQFPGYDYELLAEKKPGKNMEPFIIH- 117 Query: 107 ASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 A + HE E + V+DGQL+ + L+ G+ V F + + H+ ++ G + Sbjct: 118 APFEAQRTYSHE--GEEFIYVMDGQLEFYYGDDTYHLDPGDNVYFDSVIPHVGKSMGHEK 175 Query: 167 VHFHSLIHY 175 +I++ Sbjct: 176 SKLLVVIYF 184 >UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWQ8_9PROT Length = 195 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 9/178 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ + LR + S +LA GVSK ++ QIE+ S+P +ATL ++A+ L V Sbjct: 12 VIARNVALLRHGQRLSYEQLARRAGVSKGVVVQIEQARSNPNIATLCRLASALGVAVVDL 71 Query: 67 ISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISESTPHE 118 ++ A V + ++ + L E + + +G + H Sbjct: 72 LAEDSGAGVRVVRADEVPVLWSGPNGGTARLLAGTRGPDMLELWEWVLHAGERYDGAAHA 131 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 G E V V++G L + VDG+ L G+G+ FA D H Y + V F +H P Sbjct: 132 AGTREIVHVVEGVLAIEVDGQRIDLAAGDGMTFAGDRRHAYLAVSD-LVRFTMAVHEP 188 >UniRef50_Q1EMV7 Putative DNA binding regulatory protein n=1 Tax=Streptomyces cattleya RepID=Q1EMV7_STRCT Length = 185 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 3/180 (1%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E + + +++LR+ RG S++ L+ +GVS+A L +E +PT+ T+ IA L + Sbjct: 5 EGVGVTVGAQVRRLREFRGLSVAELSRLSGVSRATLSMLESGRGNPTIETVSAIAVALRL 64 Query: 62 PFSTFISPPQSATPSVY--DPQQQAMVITSLFPYDPQLCFEHFSIQM-ASGAISESTPHE 118 P + P P + P+ Q L E + +++ +G +S PH Sbjct: 65 PLGDLLVDPTPPEPVLRPGTPRPQTSRQDLLDRIGAGGHSEIWRLRLCGAGRRVDSPPHT 124 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +G +E VV + G+L L L G+ V F AD H Y ++ V ++ YP + Sbjct: 125 RGTLERVVALRGRLRLGPVDRPVVLATGDFVVFPADEPHFYEAVDDEDVDAVIVMTYPAA 184 >UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K4_PELCD Length = 188 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 9/179 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + LK R +G ++ L +GVS M+ +IER + P+V L K+A+ L + Sbjct: 2 IKTLIGKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSI 61 Query: 64 STFISPPQSATPSVYDPQQQA---------MVITSLFPYDPQLCFEHFSIQMASGAISES 114 F+ + ++ + + Q I+SL F + S Sbjct: 62 GYFVEEAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQDPSFTVLHDTLEKNCNSGD 121 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 P E V+V+ G+L+ + E L G+ + F A + H++RN ++ Sbjct: 122 APMVHTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVLWVV 180 >UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JI22_AGRRK Length = 204 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 10/179 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + ++ LR +R SL+ LA TG+S L QIER SS V +W +A L+V Sbjct: 16 NEVDVLVGRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDV 75 Query: 62 PFSTFISPPQSATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 S I +Y + +A I+ P + + G +E Sbjct: 76 EPSALIVDGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSPPGAALTGMQVIVEPGGGTE 135 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + H E V G+++L VD L G+ F + + H +RN G + + Sbjct: 136 TYAHT--GHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWV 192 >UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=Deltaproteobacteria RepID=A0LGL4_SYNFM Length = 209 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 81/186 (43%), Gaps = 14/186 (7%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 + + T +++ R+Q+ ++S LA TG+ +A L +E + P++ L KIA L + Sbjct: 23 SEKIGTRVRKYREQKSLTVSELASRTGLDEAFLEAVEEHNVYPSLGPLLKIARALGLRLG 82 Query: 65 TFISPPQSATPSVYDPQQQAMVITSLFPYDP--------------QLCFEHFSIQMASGA 110 TF+ + P + ++ ++ L D E F I++ + Sbjct: 83 TFLDDQEVGDPLIVRVGERKEELSMLKGKDKPVTLRFHSLGRGKGDRHMEPFYIEILPES 142 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + E +VV+ G++++ E L G+ + + + V H + G + + Sbjct: 143 ARDKKLSAHEGEEFIVVLSGEVEVIYGQETHVLKAGDSIYYNSVVPHYVSSIGSRKAEIY 202 Query: 171 SLIHYP 176 +++++P Sbjct: 203 AVLYFP 208 >UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFC8_FUSMR Length = 187 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 9/185 (4%) Query: 1 MEN--LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATG 58 M+N L L ++ R + ++ L+E G++ +ML QIER+ +P++ATL I+ Sbjct: 1 MKNDILDLGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKA 60 Query: 59 LNVPFSTFISPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAI 111 L+VP F + V ++++ V L D + E + + S + Sbjct: 61 LDVPLFMFFKEENNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPSYSF 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 +E E ++ G++ + + LN G+ +R A H + N + V Sbjct: 121 TEEIGQSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVKVIF 180 Query: 172 LIHYP 176 I+ P Sbjct: 181 AINPP 185 >UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rhizobiaceae RepID=A6UF59_SINMW Length = 197 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 14/189 (7%) Query: 1 MENL----ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIA 56 MENL + ++ LR + +L LA GVS+AM+ +IER E+SPT L ++ Sbjct: 6 MENLGSQLDEVVGMRVRALRAAQDLTLDDLANRAGVSRAMISRIERGEASPTAQLLARLC 65 Query: 57 TGLNVPFSTFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMAS 108 + L S + S + Q Q + S+ P + ++ Sbjct: 66 SALGTTLSALFASGVSEASPLARRQDQRLWRDPESGYLRRSVSPEGVGSPIDIVEVEFPP 125 Query: 109 GA--ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 GA + E P ++G+ +H+ + G+L+L ++ Q L G+ + + HI+ N E+ Sbjct: 126 GARVVFERQPMDRGITQHLWLFSGRLELTMESGQQLLEPGDCLFMGLEEAHIFHNPYEEA 185 Query: 167 VHFHSLIHY 175 H+ ++ Sbjct: 186 AHYAIVLCR 194 >UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12 Tax=Bacteria RepID=Q1AT52_RUBXD Length = 220 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 16/187 (8%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N ++L +++ R ++G +LS ++ +SK+ML +IE ++SP++ T+ ++A L V Sbjct: 23 NPDQYLGNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVT 82 Query: 63 FSTFISPPQSATPS-----------VYDPQQQAMVITSLFPYD--PQLCFEHFSIQMASG 109 ST S + + V + L Y+ P+ FE F I + Sbjct: 83 LSTMFSNYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIK-- 140 Query: 110 AISESTP-HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 SE+ P E IE + +++G+L L G+ + F D+ H + + Sbjct: 141 NKSETFPTFEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPHGPEQLIDVPIR 200 Query: 169 FHSLIHY 175 F ++I+Y Sbjct: 201 FLAIINY 207 >UniRef50_C6CLM7 Transcriptional regulator, XRE family n=12 Tax=Bacteria RepID=C6CLM7_DICZE Length = 195 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 9/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 + R L+ L LR++RGWSL L++++G+S+A L ++ER ESSPT L ++ Sbjct: 11 LSETDRRLAERLAALRRERGWSLDELSQSSGISRATLSRLERMESSPTAVLLGRLCAVYG 70 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGA-I 111 S+ ++ + P QQ + I S+ P E ++ +GA I Sbjct: 71 CTMSSLLAEVEIQLPQKLSAAQQPVWIDPETGFIRRSVSPPSAGFRAEMIHGELPAGARI 130 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 P G+ H+ V++GQL + ++G TL + +R+ + N G V + Sbjct: 131 DYHAPPLAGLEHHLYVLEGQLVMTLEGVIHTLGPQDSLRYRLYGASGFHNPGPDAVRYLI 190 Query: 172 LIHYP 176 I P Sbjct: 191 AICTP 195 >UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB Length = 204 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 22/190 (11%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ + T +Q+RQ +G SL L+E +GVS + QIER+ ++P++ L I LNV Sbjct: 10 EDTPGAIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNV 69 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITS--------------LFPYDPQLCFEHFSIQMA 107 P T + + L + + + Sbjct: 70 PMQVMFGDDSGTTADSDADGDPPFLRRAAKRPRIDLGSLHKELLTSGGNHNLQIMILTIE 129 Query: 108 SGAISE----STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 G S S P EKG +V++G+L L VD L G+ F + H +RN G Sbjct: 130 PGGTSGNTTLSYPAEKGG----LVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDG 185 Query: 164 EQTVHFHSLI 173 ++ +I Sbjct: 186 DRPARILWVI 195 >UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE71_DESAA Length = 527 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 5/177 (2%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 T+K+LR+ W+ LA+ATG + + +E +E SP+V+ L ++A L + Sbjct: 351 DSSFGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPG 410 Query: 65 TFISPPQ-----SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 TF+ + Y + Q+ L P F I + S + ++ Sbjct: 411 TFLRDEEKSAIRDQRAKAYAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPVEYKH 470 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+DG L+L +D L GE RF +++ H ++ + +++ P Sbjct: 471 EGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527 >UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=Bacillus RepID=A0RIX6_BACAH Length = 237 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 85/168 (50%), Gaps = 4/168 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + ++++RQ+RG +++++ E TG+SK + Q+E N++SP+++TL I+ LNVP + Sbjct: 59 IGSAIREIRQRRGITIAQICEGTGLSKGFMSQVENNKTSPSISTLETISNFLNVPLPYLL 118 Query: 68 SPPQSATPSVYDPQQQAMVIT----SLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIE 123 + V +++ V + Q +++ +G E+TP+ E Sbjct: 119 LEQKDRLKVVKKVERKYSVYGKDEQRIEHVAEQGGLRLNLVEIPAGFPKENTPNAHEGEE 178 Query: 124 HVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 +V+ G+L++ + + G+ + A V HI RN GE+T Sbjct: 179 CHLVLRGKLEVQHGEDVAIVEEGDSFSWNACVPHIVRNIGEETALLLI 226 >UniRef50_A3MUA0 Transcriptional regulator, XRE family n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=A3MUA0_PYRCJ Length = 528 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 10/173 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L R + + LR++RG SLS LAE GVSK+ L +IE +P+V TLWKIA L V Sbjct: 3 EYLKRSVGERIAALRRERGLSLSELAERAGVSKSTLYEIEMGRVAPSVTTLWKIANALEV 62 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 F + P ++++ + + FE + +++ A+ S PH V Sbjct: 63 GFGALV-------PEWVLVSERSVDV---LLIERGDGFEAYLMRLKPYAVHVSRPHVGVV 112 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E+V V G + L GE F +V H Y G +T L++ Sbjct: 113 SEYVFVAKGAAVVGPVDSPIFLREGEATEFPGNVPHFYAPFGGETRLIVRLVY 165 >UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IAI3_9BACI Length = 188 Score = 146 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 11/177 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +R++RG SL L+ + VS +ML QIER +PT+ +IA LN S + Sbjct: 3 FGKQVNFIRKKRGMSLQELSALSKVSTSMLSQIERGGKNPTITVACQIAEALNTTLSALL 62 Query: 68 SPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISESTP-HE 118 ++ V +++ + L P P E + + S P H+ Sbjct: 63 DSQETREIVVIRKEKRPVYFDESSGFQRHLLSPSFPSRGIEFVKNVIPPLSESGIFPAHK 122 Query: 119 KGVIEHVVVIDGQLDLCV--DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 GV E++ V G L++ + + LN G+ F A+ H + N + + +I Sbjct: 123 SGVKEYIYVEKGSLNVELSKGAYKEQLNEGDSFFFEANTEHRFINETDHECIYFLVI 179 >UniRef50_A6G914 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G914_9DELT Length = 199 Score = 146 bits (369), Expect = 4e-34, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 9/186 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + + ++ RQ G SL LA+A+GVS ML ++ER +PTV ++IA L Sbjct: 1 MHDPSSSIGKNIRSRRQALGLSLDALAQASGVSSTMLSEVERARKNPTVKLAYQIARALG 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAIS 112 + + + S+ Q+ ++ L E ++ +G S Sbjct: 61 CSLTDLLEDSPAVEVSIVRADQRRTLVDPDTQVVRHGLRSSLLDRNLELAWYELPAGESS 120 Query: 113 -ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E + G++E V++G +++ + G L G+ + + T YRN G++ Sbjct: 121 GEMGANLPGMVELATVVEGSVEVVLGGRSFELELGDSITYGPQSTTEYRNPGDEPAQILL 180 Query: 172 LIHYPR 177 LI + Sbjct: 181 LIDTSK 186 >UniRef50_C8XHM1 Transcriptional regulator, XRE family n=2 Tax=Frankineae RepID=C8XHM1_NAKMY Length = 187 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 2/173 (1%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L+ R ++G S+ LA+A G+ K L +IE +PT++TL+ +A L P Sbjct: 5 DLPHLIGERLRAARTEQGLSVGGLAQAAGIGKGSLSEIENGTRNPTLSTLYGLANALGRP 64 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFP--YDPQLCFEHFSIQMASGAISESTPHEKG 120 S ++ A S + + ++ P D + E ++I++ G+ S H Sbjct: 65 LSWLLAEQVGAQVSSPGIAARLLDTSATGPSGTDDDVTVEVYAIRLEPGSTHVSQAHGPA 124 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 V+EH++V+ G++ G TL+ G + +D H YR E+ +I Sbjct: 125 VVEHLLVVRGRVAAGRQGAEVTLDTGMSTSWVSDGPHSYRALDERPADVVLVI 177 >UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T298_MYCVP Length = 180 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 1/162 (0%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L+ +RQ+RG +L LA TG++K+ L ++ER +S P++A KI+ L V + S Sbjct: 5 LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFSDDP 64 Query: 72 SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE-KGVIEHVVVIDG 130 + D + L E + G + PH E + V G Sbjct: 65 EVSTISVDRAAERGADRHHAVAARMLGKEMSPFVVRPGRTFTTHPHPTHLGQEFIFVHSG 124 Query: 131 QLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 +++L DG L G+ F A H R GE + Sbjct: 125 RVELSHDGRIIALEAGDCAYFDASAPHKLRQIGEDAAEVVVV 166 >UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JV98_9RHOB Length = 195 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 12/176 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + ++ LR ++ L++L T +S ML +IER + PT+ TL +IA V F Sbjct: 15 IGQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGLEHFF 74 Query: 68 SPPQSATPSVYDPQQQ-----------AMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + T + +++ + SL + F + A + S P Sbjct: 75 EEGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVNDRPIDSFLSEFVPRAKA-SEP 133 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 HE IE V VI G L++ + + L + + F A H Y+ + Sbjct: 134 HEHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCASPDKATAVIV 189 >UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria RepID=Q1IRF9_ACIBL Length = 292 Score = 145 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 4/176 (2%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 A + L+ +R RG SL+++AEA G+S L IER+ S +VATL K+A + Sbjct: 115 ADNVGLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNIL 174 Query: 65 TFISPPQSATPSVYDPQQQAMVITSLFPYD----PQLCFEHFSIQMASGAISESTPHEKG 120 V +++ + + + E +A GA S + Sbjct: 175 DLFDQSGGRQYLVRPAERRQLDASDGVRMELLAWGNPVMEPHLFHVAPGAGSGDEEYSHE 234 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E + V+ G L+L VDG+ L G+ F + H + N G + + P Sbjct: 235 GEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTPP 290 >UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WPD8_BORBR Length = 201 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 20/195 (10%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + R + ++++R+++ SL LA +GV+ ML QIER+ +P++ TL +I L+VP Sbjct: 4 DDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDVP 63 Query: 63 FSTFISP------------------PQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSI 104 S ++ T V M L P Q + + Sbjct: 64 LSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPPAGQR-LQFMVL 122 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + G S + P + +V+ G +L +DG+ L G+ +F H++RN + Sbjct: 123 NIQPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPYD 182 Query: 165 QTVHFHSLI-HYPRS 178 + +I H P + Sbjct: 183 EPASILWIIAHEPAA 197 >UniRef50_C9ND81 Transcriptional regulator, XRE family n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9ND81_9ACTO Length = 190 Score = 145 bits (367), Expect = 7e-34, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 4/175 (2%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 A + +++ R+QRG S + LA G+ KA L Q+E +PT+ TL +A L +P + Sbjct: 14 AIAVGAQIRRRREQRGMSSAELARRAGLGKATLSQLEAGRGNPTIETLDALAIALRIPLT 73 Query: 65 TFISPPQSATPSVY---DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 ++ P + D + L E + ++M G + PH G Sbjct: 74 DLLARDTDPGPVLVPGTDLADGEVGRELLRRISSGNSLEIWRLRMPPGTDLDGVPHATGT 133 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 IEH++V G++ L G+ + FA D H+YR G +I P Sbjct: 134 IEHLLVSSGRVTAGPTDAPSDLYTGDLLAFAGDAPHLYR-TGPVAADVTVVIASP 187 >UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales RepID=Q3A2S3_PELCD Length = 188 Score = 145 bits (366), Expect = 9e-34, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + LK+LR + L ++K + Q+E + + P++ATL I Sbjct: 1 MER-NLNIGEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F + P + + + L P + + + GA E Sbjct: 60 VSMQEFFTDPVDTEVVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEME 119 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 +G E V+ G++ + +D + T+ E F +D H RN G+ ++ Sbjct: 120 EQDFHEG-EEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVV 178 Query: 174 HYP 176 P Sbjct: 179 TPP 181 >UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z3_MACCJ Length = 167 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 3/165 (1%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + ++++R++R +L ++AE T +S L Q+E N+S T+AT+ IA L V S F Sbjct: 3 IGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQFF 62 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 S V + ++Q+ L YD F +++ G G E V Sbjct: 63 YEHAS-LMDVLNAKRQSFYYEQL-AYDKGSPFIPLKVKLKPGNTDLEYVQHDG-FEFVYC 119 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + G+L + +D L+ GE + + A+ H + N ++ V F + Sbjct: 120 LKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVI 164 >UniRef50_Q1GC59 Transcriptional regulator, XRE family with cupin sensor n=21 Tax=Rhodobacterales RepID=Q1GC59_SILST Length = 188 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 +++ L LK+ R+ +G SL +A +GVS++M+ QIER ESSPT+ATLW + L V Sbjct: 6 DDILTLLPARLKEARRAQGLSLEAVANLSGVSRSMVSQIERGESSPTIATLWNLTRALQV 65 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITS---------LFPYDPQLCFEHFSIQMASGAIS 112 F+ + ++A + VI S L P + E + I ASG Sbjct: 66 DFAGLLEAGEAADRIDVLRARDVPVIDSKAAHCTIAILSPPEDVGGHEVYDISFASGGAL 125 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRF 151 S PH G E + V++G++ L L G+ R+ Sbjct: 126 ISQPHAPGTREQLTVLEGRVVLTSGTAEDRLEPGDTARY 164 >UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4Z4_CLOK5 Length = 179 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 9/178 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +K+LR ++G +L ++E TG+S L Q ER ++ V L IAT LNV + F Sbjct: 3 IGEKVKELRNKKGLTLKTMSEKTGLSTGFLSQFERGITTIAVEHLSTIATVLNVRINYFF 62 Query: 68 SPPQSA-------TPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + P V + S +P D L E + + + Sbjct: 63 DDEEKELIIRSYDQPFVRQINKAIYKSLSRYPEDKMLSPELIEL-LPKDEHQYPDIYAHQ 121 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 E + V++G L L +D L G+ + + H + N + V F ++ HYP S Sbjct: 122 GEEFIYVLEGILTLIIDENIFKLYPGDSAHYLSTQKHNWDNQTNKVVKFITV-HYPSS 178 >UniRef50_A4FEP7 Transcriptional regulator, XRE family n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FEP7_SACEN Length = 192 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 10/177 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L+ L+ LR++ G SLS +A +G++K L Q+E +PT+ T++ ++ L+VP S+ Sbjct: 1 MLAANLRALRERAGLSLSEVARRSGIAKGTLSQLESGAGNPTIETVFSLSNALSVPVSSL 60 Query: 67 ISPPQSATPSVYDPQ------QQAMVITSLFPYDP-QLCFEHFSIQMASGAISESTPHEK 119 ++ + + A+ + L D + FE + ++ G + S H Sbjct: 61 LTERLDPEVVLVRSRGLEVLSSNAVDLRMLRRMDLTETVFELYDQRVRPGEVQRSEGHP- 119 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EHVVV G L + L G+ V F A HIY G V L+ YP Sbjct: 120 -GREHVVVTSGVLRVGPPDSPFELEAGDYVCFPARQPHIYETVG-GPVVSVLLLEYP 174 >UniRef50_C7PXU7 Transcriptional regulator, XRE family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PXU7_CATAD Length = 215 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 7/148 (4%) Query: 20 GWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVY- 78 SLS +A +SK+ L Q+E +P++ TLW + T L +PF PP T + Sbjct: 53 DLSLSEVARRADLSKSTLSQLESGIGNPSLETLWALCTALGIPFGQLFDPPPPRTQVIRA 112 Query: 79 ------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQL 132 +Q + L P + + ++ G++ S PH GV+EHVVV G+ Sbjct: 113 GSGAAVAAEQADYRVLLLATCPPGARRDVYRVEAEPGSVRRSDPHAPGVVEHVVVCAGRA 172 Query: 133 DLCVDGEWQTLNCGEGVRFAADVTHIYR 160 + V E L G+ + + DV H++ Sbjct: 173 LVGVAEEPVELGPGDYIVYPGDVPHLFE 200 >UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepID=A0PPF1_MYCUA Length = 180 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L+ +R+QRG +L +LA+ G++K+ L +IER +S+P++A K+A L+V S Sbjct: 5 LRAVRRQRGLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSDES 64 Query: 72 SATPSVYDPQQQAM-----VITSLFPYDPQLCFEHFSIQMASGAI-SESTPH-EKGVIEH 124 + D + L F ++ +G + PH E E Sbjct: 65 AHETITADRAHDRLGPQSGRYHVLASTQLGKTMSPFVVRPTAGQDCASDGPHPEHTGQEF 124 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 V V G ++L + TL G+ F A V H R G + + Sbjct: 125 VFVHTGSVELDYGDQTITLGTGDSAYFDASVGHKLRAVGTERAEVVVV 172 >UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR Length = 182 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 7/175 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + K LR++ G S LA+ GV+ + QIE N SP+VA+L K+ + + Sbjct: 1 METEIGPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSM 60 Query: 64 STFISPPQSATPSVYDPQQQ-------AMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + F + + + +QQ + + Y ++ GA + Sbjct: 61 AEFFAVDEPKPDQFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEM 120 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E V++ G+L+L VD E L+ G+ F + TH +RN + S Sbjct: 121 LAHEGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVS 175 >UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UFY6_METS4 Length = 201 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 13/182 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++ LR+ +G +L ++A GVS L QIERN S + L +IAT L V S F Sbjct: 21 LLGEQIRALRKIKGLTLQQIAGEIGVSIGYLSQIERNRSKLPIGVLKRIATILGVQLSWF 80 Query: 67 IS-----PPQSATPSVYDPQQQAMVITS------LFPYDPQLCFEHFSIQMASGAISEST 115 PP+ V +++ M T L + E +A G S+S Sbjct: 81 FQPQTLGPPEEQDFIVRAGRRRRMSFTGTGIAEELLSPNLNGPLEVLLSTIAPG--SDSD 138 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + +E +V+ G LDL + L G+ F++ H N GE +I Sbjct: 139 FYSHDGMEAGLVLAGTLDLWIGDRTFRLEVGDSFSFSSRERHRCANPGEIETKVVWIITP 198 Query: 176 PR 177 P Sbjct: 199 PH 200 >UniRef50_C5BLI6 DNA-binding protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLI6_TERTT Length = 185 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 5/180 (2%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E LAR L+ ++QLR +RG++ ++A + + IE ++PT++ L K+A L Sbjct: 3 LETLARNLAGNVRQLRSERGFTQQQMATLAQIPRPTWASIESGAANPTLSVLSKLANALQ 62 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--LFPYDPQL--CFEHFSIQMASGAISESTP 116 V +S P+S P P+L E +Q+ A + P Sbjct: 63 VSIEELVSAPRSQAAFFAAGFGPHRKRRGGIFSPMVPELVPGVEISRLQIEPAATVQGAP 122 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN-GGEQTVHFHSLIHY 175 H G E++ G+L+L +D L G+ V F D H Y N + S++ + Sbjct: 123 HTHGTREYLTCERGKLELRLDDGSWFLLPGDAVAFRGDQKHAYVNCLHNEPSIAFSVVCF 182 >UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteobacteria RepID=A8HXH8_AZOC5 Length = 249 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 13/187 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L ++ +R+Q ++S LA A G+S ML +IE + SP+++TL +A LNVP Sbjct: 61 SLEQALGIQVRSIRRQLDLTVSDLANAAGISVGMLSKIENGQISPSLSTLQSVARALNVP 120 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFPY------------DPQLCFEHFSIQMASGA 110 + S + Y Q +VI + E + I + A Sbjct: 121 ITALFSTFEERHDCSYVKAGQGVVIERRGTKVGHQYELLGHGLGGDIVVEPYLITLTQEA 180 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + T G +E + ++ G++ L G+ + F + H + + + Sbjct: 181 VPY-TSFRHGGVEFIHMLSGEVVYRHGDRTYHLRPGDSLMFDSAAAHGPEELITRPMTYL 239 Query: 171 SLIHYPR 177 S+I Y R Sbjct: 240 SIIVYSR 246 >UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX2_9PROT Length = 192 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 20/190 (10%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME L + L+QLR++RG +L LA TG++K L +IE + P +ATL +IA + Sbjct: 1 MEEL---IGPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIG 57 Query: 61 VPFSTFISPPQSATPS-----VYDPQQQAMVIT--SLFPYDPQ--------LCFEHFSIQ 105 + F Q A V +Q + S F YD + + F Sbjct: 58 CDMAYFFQSQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFT 117 Query: 106 MASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + + T E E V V++G + + G TL G+ V F + + H ++ G Q Sbjct: 118 FPA-ELQGDTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPHRGKSKGAQ 176 Query: 166 TVHFHSLIHY 175 +IH Sbjct: 177 -AQALVIIHR 185 >UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LFU9_RALME Length = 212 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 13/178 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ L +LR+ G +L LA+ ++K+ L ++ER SSPT+ T+ K+A L V I Sbjct: 30 IAERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQLI 89 Query: 68 SPPQSAT-----------PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + A P ++ ++ P + F + + + E P Sbjct: 90 TRSSRANEILHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIM-VPPFTLEEDQP 148 Query: 117 HE-KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E + V+ G++++ D ++ G+ + F A + H R+ G ++ Sbjct: 149 MASHAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPHRSRSLGRIQAQALVVV 206 >UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD Length = 205 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 5/178 (2%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + L+ R+QRG SL+ +AE TG+SK L ++ER+ SP++ +L IA + Sbjct: 1 MQAPRFPIGERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVG 60 Query: 61 VPFSTFISPPQSATPSVYDP-----QQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + + + D + + T L P D + ++ G+ + Sbjct: 61 LAVADVFAVAPVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGSGGDEL 120 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H +E V+ G+++L E TL+ G+ FAAD H +RN G+ ++ Sbjct: 121 YHLPSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVLWVL 178 >UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UR68_RHOBA Length = 233 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 12/165 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+ L+QLR RG +L +A+ +G +K+ L ++E +P++ L +A+ L V S+ + Sbjct: 55 LAQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSSLL 114 Query: 68 S--PPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 + V +++ ++ SL + F +++ SG E P Sbjct: 115 EGLDDRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKIPSGEERE--PR 172 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNG 162 E + V+ G++ + TL+ G+ + F ++V H N Sbjct: 173 THEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANP 217 >UniRef50_B6J765 Transcriptional regulator n=6 Tax=Coxiella burnetii RepID=B6J765_COXB1 Length = 183 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 9/178 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 F + LK+LRQ+R S+ LA+A GVSK+M+ +IE E PT+ K+A L S Sbjct: 3 FFAERLKRLRQERQMSMQALADAAGVSKSMICKIESTEVQPTLDVAGKLAVALGKTLSEM 62 Query: 67 ISPPQSATPSVYDPQQQAMVI-------TSLFPYDPQLCFEHFSIQMASGA--ISESTPH 117 + PQ+ + ++QA+ I ++ P E ++ GA TP+ Sbjct: 63 LHSPQTPSVIQLTTEEQAIWIDAQNIKRRNISPILEGSKVEWLFVEFPPGASLTKPLTPY 122 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 +++++ G L++ ++ +L G+ + + N + ++ LI Sbjct: 123 TPETEKYILITKGVLEVKINKTIYSLKKGDSLYYDGKCASELLNPSRKVTEYYVLIVR 180 >UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA Length = 224 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 10/172 (5%) Query: 11 TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP 70 LK LR+Q+GW+L LAEA G++K+ L ++ER S P++A K++ L V S Sbjct: 43 RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSES 102 Query: 71 QSATPSVYDPQQQ---------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 + Q A S+ F + +S S E Sbjct: 103 RDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVHPPRDYVS-SAFREHEG 161 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E + V G +++ E L G+ V F A + H R+ G ++ Sbjct: 162 EEMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPHRMRSVGVTQAEVLVVV 213 >UniRef50_B5XVI4 DNA-binding protein n=3 Tax=Enterobacteriaceae RepID=B5XVI4_KLEP3 Length = 189 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 4/175 (2%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ + + +++LRQ RG SL+ L++ +GVSK L ++E SSP V TL IAT L +P Sbjct: 12 LSLNIGSKIRRLRQSRGISLNDLSKLSGVSKGALSKLESGSSSPRVDTLDAIATALRLPV 71 Query: 64 STFISPPQSATPSV--YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 +S P + P F P E + +QM S H +G Sbjct: 72 GDLLSGGSRMYPRFEKHRPVPGEYSQMMKFRIGPGNTSEIWLLQMEPQVTIHSPGHSEGA 131 Query: 122 IEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 EH++V G L L E TL G+ F+A V H Y + E V ++ + Sbjct: 132 HEHILVHSGTLRLRFSQYEVITLEPGDFYAFSAQVAHTY-SATETAVSATVVMTH 185 >UniRef50_B6A104 Transcriptional regulator, XRE family n=49 Tax=cellular organisms RepID=B6A104_RHILW Length = 207 Score = 142 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 11/189 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E ++ +S LK R+ G+SL L+ +GVSK ML +IE+ ++P++ATL + AT L Sbjct: 15 VERVSATVSQNLKIFRRDSGFSLDELSRRSGVSKGMLVEIEKGTANPSIATLCRAATALG 74 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAIS 112 V + F+ S + P+ + + L + E + M G + Sbjct: 75 VSVADFVGVASSVPVRIVPPEDASTLWRGPNGGSATLLVGTNGPDEIELWRWSMFPGEMF 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ES H G +E + V G+L ++ Q + G V + H Y N GE + F Sbjct: 135 ESPGHSPGTLELLNVEVGELTFRLEETEQAVRAGSSVLARTESPHAYLNRGECELRFVMA 194 Query: 173 I---HYPRS 178 + PRS Sbjct: 195 VAELQRPRS 203 >UniRef50_Q39D54 Transcriptional regulator, XRE family n=59 Tax=Proteobacteria RepID=Q39D54_BURS3 Length = 233 Score = 142 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 8/184 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++ L + + L +LR +R SL LA +GVS+AML QIE S P++ L KIA L Sbjct: 28 LDVLEQVVGVNLARLRAERQLSLDALARLSGVSRAMLAQIESARSVPSIKVLCKIAAALK 87 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAIS 112 V + F+ ++ + V++S L+P E +++A Sbjct: 88 VSVAAFLRRHAVNGFEHLAAERASRVVSSNGRFSARALYPEGEPAAAEFHELRIAPLHTE 147 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 G ++VV +G L++ V Q L G+ + F AD + RN G+ + Sbjct: 148 PGARRAPGTTVNLVVSEGTLEVSVHERRQLLATGDAIVFDADQPYSLRNPGDSEARAFRV 207 Query: 173 IHYP 176 P Sbjct: 208 TVSP 211 >UniRef50_B9L7E6 Helix-turn-helix protein n=1 Tax=Nautilia profundicola AmH RepID=B9L7E6_NAUPA Length = 272 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 13/170 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L +K R+ +G +LS LA GV+K+ L +IE N+++PT+ T+W IA L VPF + Sbjct: 3 LGEKIKFFRENKGLNLSELASRAGVAKSTLFKIEENKTNPTINTIWAIAEVLGVPFGELV 62 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 + V S+ + FE + + + + A + PH G +E + V Sbjct: 63 GEGEIKGEGV-----------SVVLIEKTDEFESYKMNLKTSAEYIAKPHFAGAVERIYV 111 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 + G + + + TL+ GE V F AD THIY T I+YP+ Sbjct: 112 LKGDVKVGSVDDIHTLHSGETVEFEADKTHIYSALTPST--LIVTIYYPK 159 >UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A6284 Length = 177 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 8/172 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + ++ LR+Q +L A + G+SK L QIER + P++A+L IA L V F+ Sbjct: 1 MGNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFV 60 Query: 68 SPPQSA-------TPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 P A P + A + + + ++ +G + G Sbjct: 61 GAPGDAPTACRCEAPPQPGAEAIAHALAQVSHLANGTKLDAMLFRIPAGQAALEVASHTG 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + V++G+++L +D L GE + + V H + N ++ + Sbjct: 121 -EEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAADEEAVIVWV 171 >UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN Length = 189 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 9/177 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + +K LR + +L ++AE T +S + L Q+ER +SS T+ +L KI+ L V Sbjct: 1 MEPTIGVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSP 60 Query: 64 STFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 F S S + V L + ++ + Sbjct: 61 GYFFSGESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGE-KGM 119 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 P E + V++G L + + E L G+ + + V H + N + F + Sbjct: 120 PFVHQGQEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCV 176 >UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria RepID=B5EKJ2_ACIF5 Length = 181 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 10/174 (5%) Query: 10 TTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISP 69 ++QLR+ RGWS+ LA +S + L QIE ++SP++ATL KI L +P + Sbjct: 6 KKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAAIFDD 65 Query: 70 PQSAT-PSVYDPQQQAM--------VITSLFPYDPQLCFEHFSIQMASGAISESTPHE-K 119 ++A P + + + L PQ + + + G P+ Sbjct: 66 GETAGLPWIMRSGDRRKFYSAGSHASLEPLARGLPQKKMQPLLMVLEPGGECGEHPYTSA 125 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E +VI G G L G+ + + + H + N G ++ Sbjct: 126 EGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHNRGHSATTLLVVV 179 >UniRef50_B5HW94 DNA-binding protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HW94_9ACTO Length = 194 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 11/186 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + L L +LR +RGWSL LAE +GVSK+ L + ER E SPT + L ++ Sbjct: 9 DPVDTRLGVRLAELRAERGWSLGELAERSGVSKSTLSRAERAEISPTASLLNRLCGVYGR 68 Query: 62 PFSTFISPPQ----------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 S +S + SA V++ + V S+ P P L E ++A+GA Sbjct: 69 TMSQLLSEIEAEAEPAPLVRSAGQPVWEDRAAGFVRRSVSPPHPGLRGELVEGRLAAGAD 128 Query: 112 -SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + P G+ +H+ V++G LD+ L+ G+ +R +R G V + Sbjct: 129 LAYDRPPVPGLEQHIWVLEGALDVTAQDVEHHLDTGDCLRLRVWGPTRFRCAGPDAVRYV 188 Query: 171 SLIHYP 176 + P Sbjct: 189 LAVVLP 194 >UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Actinomycetales RepID=C8X7U0_NAKMY Length = 197 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 1/171 (0%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R + LK LR QRG +L+ ++ +TG+SK+ L ++E + PT+ L ++ VP Sbjct: 17 RQVGPRLKGLRTQRGLTLTVVSASTGISKSTLSRLETGQRRPTLELLLALSHAYRVPLDD 76 Query: 66 FISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHV 125 ++ P+ P + + T + + + I + + ++ T G E + Sbjct: 77 LVAAPEEGDPRLRLKPGRVKGRTVIPLTRQSDGMQAWKIIIPTSNVTPETRSHDG-DEWI 135 Query: 126 VVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V+ G + + + L G+ F V H + + G+ S+ P Sbjct: 136 YVLSGHMRFLLGDQDMVLGPGDVAAFDTKVPHWFGSTGDAPAEILSIFGRP 186 >UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN Length = 169 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 11/163 (6%) Query: 21 WSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDP 80 +L++LA + +S A++ QIER +++P+ TL ++A GL +P F V Sbjct: 1 MTLAQLAAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASPVVRS 60 Query: 81 QQQ-----------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVID 129 + + L + E I G + +TP G E +V+ Sbjct: 61 GDRRNLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMS 120 Query: 130 GQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 G++D+ +DGE TL G+ + FA+ H Y N E++ + Sbjct: 121 GKIDVYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWV 163 >UniRef50_A6VVG9 Transcriptional regulator, XRE family n=3 Tax=Gammaproteobacteria RepID=A6VVG9_MARMS Length = 176 Score = 141 bits (357), Expect = 9e-33, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 7/176 (3%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + L ++++R +G SLS+LA G++K+ L +IE+ E +PT+ T+W++A LNV Sbjct: 3 KPILGSLGRNIQKMRMAKGLSLSQLALDAGLAKSNLSRIEQGEGNPTLETIWRLAVQLNV 62 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 PF ++ +S + + + + + + + + A I +S PH G Sbjct: 63 PFGDLVATVESTL------GENGVQVRLIDQGEDNPRLDVYWMSCAPNTIKQSEPHIAGT 116 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 E + +I G+L + + + L G+ FAADV H Y+ + +I Y + Sbjct: 117 TETITLISGKLLAGENNDLRHLEIGKAHTFAADVPHSYQ-TDDSWATLMMVITYSK 171 >UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=Q1GM81_SILST Length = 190 Score = 141 bits (357), Expect = 9e-33, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 15/180 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L+ +R++ S LA+ TGV + + IE + +P+V L +I G+ + S F Sbjct: 13 LGPRLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPISLSDFF 72 Query: 68 S-PPQSATPSVYDPQQ----------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + P++ S Y + V +LF + +E + I +G + Sbjct: 73 AFEPETEKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADTGRVMYG-- 130 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E +V+ G++++ V + + L G+ F + H +R G + S P Sbjct: 131 --HEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSACTPP 188 >UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales RepID=A8I9H1_AZOC5 Length = 216 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 13/180 (7%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 A L L+QLRQ+RG +L RLA + +++ L +ER +P++ L ++AT L V + Sbjct: 25 ADRLGPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIA 84 Query: 65 TFI---SPPQSATPSVYDPQQQAMV-----ITSLFPYDPQLCFEHFSIQM---ASGAISE 113 + P + +A+ + L + + F + G I Sbjct: 85 QLFDLNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDP 144 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G E + V+ G++ + + E L G+ + F ++ H R+ G + +I Sbjct: 145 RWAH--GGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKHEVRSLGREKAQVLVVI 202 >UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6V3_PAESJ Length = 182 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 11/175 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + ++ +R+++ +++++ E TG+S+ + Q+E N++SP++ TL IA L VP + + Sbjct: 3 IGSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAYLL 62 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFE-------HFSIQMASGAISESTPHEKG 120 + V ++ IT+ P ++ +++ GA S H Sbjct: 63 LDKKEKMQIVRKDGRR---ITTSGPDKLKVSHLSSTKNVHMMIVELPPGA-STGENHAHE 118 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E VVI G + + + L+ G+ + A H +N G T ++ Sbjct: 119 GEEVHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKNIGRDTAIVMISVYT 173 >UniRef50_Q2KW20 Putative transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2KW20_BORA1 Length = 177 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 1/175 (0%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E + +S +++LR +RG S + LA G+S+ M+ +E E++ ++A L IAT L+V Sbjct: 3 EPVLEHVSANVRRLRAERGLSQTALAARAGLSRRMIVGLESGEANISLAKLGLIATALDV 62 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQL-CFEHFSIQMASGAISESTPHEKG 120 F +S P ++ L P E + +A G ++ P G Sbjct: 63 NFIELVSSPGQTPGALTWRGLHPGSQAHLVASAPGKANTELWIWTLAPGERYQAEPDPPG 122 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + VI+G+L L +G + L G + + + Y N GE + F + Y Sbjct: 123 WSEILYVIEGELTLRYEGVTRLLAAGSATAYDSCADYAYLNEGETVLRFTRNVVY 177 >UniRef50_Q1R0K7 Transcriptional regulator, XRE family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0K7_CHRSD Length = 178 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 4/177 (2%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L++LR+ RG+SLS LAE +SK+ L Q+E +PT+ TLW +A L Sbjct: 1 MPSPTPVIVANLRRLREARGYSLSALAERAAISKSTLSQLEAGHGNPTIETLWTLANTLG 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 V FS ++ ++ +V +P + + + P+ E + +Q+ASG I S H +G Sbjct: 61 VTFSELLAE-KTGGVTVGEPGGGQVQVVARGRQSPR--VEVYLMQLASGEIKHSRGHPRG 117 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 V E V+V++G L + GE F AD+ H Y I YP+ Sbjct: 118 VRERVMVVEGTLRVGTPRALAVCRAGEQHEFDADLDHRYEAL-LGATQAMVTILYPQ 173 >UniRef50_UPI0001B543C0 hypothetical protein SSPB78_17204 n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B543C0 Length = 167 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 3/169 (1%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +++LR+ R SLS LA +G+ KA L +E +PT+ TL+ + T L VP + + Sbjct: 1 MGARIRELREARALSLSALARRSGLGKATLSGLEAGTRNPTLETLYAVTTALGVPLTAAL 60 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 +PP +A + A ++ D + E + +++ +GA S H G EH+ V Sbjct: 61 APPGAAPGTASGAAVDARLLDRY--EDDEAVTETYRVRVRAGAAQHSAAHAPGTREHLTV 118 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + G + L G+ + ADV H+YR L+ YP Sbjct: 119 LAGTVLAGTATAPVRLAPGDAHTWPADVPHLYRATAAD-AEAILLVRYP 166 >UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas aeruginosa group RepID=A4XQJ4_PSEMY Length = 188 Score = 140 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 73/175 (41%), Gaps = 9/175 (5%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 A + L++ R+ G +L+++A G++ + L Q ERN + ++++L IA L+VP + Sbjct: 3 ADRIGERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLN 62 Query: 65 TFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 P P + ++ Q + L P + + G SE H Sbjct: 63 VLFDQPAQPQPDSHVNERVRYTVGGQLLAYERLSSSFPGNSINAVKMNIPVGYQSELIAH 122 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E +E V+ G++ ++G L G+ V F A H N + ++ Sbjct: 123 E--GVEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTM 175 >UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales RepID=B5EB42_GEOBB Length = 188 Score = 140 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 16/181 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + +K+LR R +L +A TG S A++ QIE + SP +ATL KIA +V + F Sbjct: 7 IGPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFDVKLAQFF 66 Query: 68 SPPQSATPSVYDPQQQAMVI---------------TSLFPYDPQLCFEHFSIQMASGAIS 112 S + Q ++ SL Y + F + + A Sbjct: 67 SEDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVTLTEKA-P 125 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E+ + E + V++G D ++ + TLN G+ + F + + H + + V + Sbjct: 126 EANTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKEVRVLVV 185 Query: 173 I 173 + Sbjct: 186 V 186 >UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Rhodobacteraceae RepID=A6DW64_9RHOB Length = 209 Score = 140 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 9/171 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L +++ RQ +L L+ GVS + L QIER+ + PT+ TL +IA L+V F Sbjct: 13 ALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSIDHF 72 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEH-------FSIQMASGAISESTPHEK 119 I+ P+ A + I+ Q+ E F + + G SE+ H Sbjct: 73 IATPRQADSVTRAETRPQFSISGTSIIYEQIGAEFPGHELTSFILNVPPGYESETVQHS- 131 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 E + V+DG++ V+G+ L G+ + + H + N E+ Sbjct: 132 -GEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARLL 181 >UniRef50_A8TR92 Transcriptional regulator, XRE family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR92_9PROT Length = 190 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 9/180 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 ++ + ++ LK LR +RGWSL +LA + +S+A L ++E E SPT L K+ + Sbjct: 10 SVDQRIAQRLKGLRAERGWSLDQLATRSAISRATLSRLENAEVSPTANVLGKLCAVYGLT 69 Query: 63 FSTFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGA-ISE 113 S + + P++ + QA+ S+ P L E ++ G I+ Sbjct: 70 MSRLMHMVEGEFPALVRGEAQAVWNDPEIGFRRRSVSPPAQTLAAEALECEIDPGTRITY 129 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 P G+ H+++++G+L + V G+ L+ G+ +R+ + + + + Sbjct: 130 DEPPRPGLEHHLLMVNGKLAVTVGGQTYNLHPGDCLRYQLFGPSAFATPADSGARYFLFM 189 >UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026G4_SOLUE Length = 225 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 13/183 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+QLR ++ +L L TG+S +ML Q+E + PT+ATL +I+ +V F Sbjct: 42 IGRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLEHFF 101 Query: 68 SPPQSA-TPSVYDPQQQAMVITSLFPYDPQLCFE------------HFSIQMASGAISES 114 + T ++ ++ P FE + + ++ Sbjct: 102 GNRRGQKTFALVRAAERLRFPERADAPKPAYFFECLAFAAQSKGLQAYVAEFPPRRAADV 161 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H E + V++G L + +GE L G+ V F + H YR E + Sbjct: 162 QEHFHEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVAEAPARAIVVTT 221 Query: 175 YPR 177 PR Sbjct: 222 PPR 224 >UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEW8_9RHOB Length = 202 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 12/175 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L++ R+ +G +L +AE G+S + Q ER+ + P++++L KIA L V + Sbjct: 16 IGAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGVSLQDIL 75 Query: 68 SPPQSATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 A + +++ AM + P ++ G SE H Sbjct: 76 PETVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIMRQPPGHRSELQSH 135 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + E V++G + + +DGE L+ G+ + F++ H N + V + Sbjct: 136 D--GEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEIVLILHV 188 >UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=C3MAN4_RHISN Length = 220 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 15/184 (8%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 ++ + L+ +R S LA+ GV+ + + IE N S+P+V L +I G+ + Sbjct: 39 MSVDIGNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGL 98 Query: 64 STFIS-PPQSATPSVYDPQQ----------QAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + F S P+ + Y ++ + +LF Q+ E + GA + Sbjct: 99 AEFFSFEPERPRKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQ----PGADT 154 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E +V+ G+L++ VD E + L G+ F + H +R G S Sbjct: 155 GKVLLVHEGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISA 214 Query: 173 IHYP 176 P Sbjct: 215 CTPP 218 >UniRef50_UPI0001C30F4B transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F4B Length = 201 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 12/188 (6%) Query: 1 MEN--LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATG 58 M+ + L+ T++ R+QRGWS +L+ G+SK L +ER E++P ++TL +I Sbjct: 1 MDEQAVIEALARTVRAARRQRGWSQDQLSAHAGISKGALVALERAETNPNLSTLCRIGDA 60 Query: 59 LNVPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGA 110 L++ + + + + D + A + + E + ++ +G Sbjct: 61 LDLNAAQLLEQRPTNGLRIVDAAEVAPLWRGPAGGTAAVVLVTGGTAPVELWRWRLPAGE 120 Query: 111 ISESTPHE--KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 E+ P+ GV++ V V+ G L L +DG L G F A H +R G Sbjct: 121 FYENVPYPDGAGVVKTVTVVAGTLRLTLDGAGHDLRRGATATFDASAAHAFRGSGRGGCE 180 Query: 169 FHSLIHYP 176 H P Sbjct: 181 LLVTTHLP 188 >UniRef50_C7Q8B8 Transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=C7Q8B8_CATAD Length = 189 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 73/179 (40%), Gaps = 3/179 (1%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERN-ESSPTVATLWKIATGLN 60 + A + +++LR +RG SLS LA V KA L +E +PT+ TL+ IA L Sbjct: 7 SDFATQIGARIRRLRLERGVSLSALARDAAVGKATLSGLEDGSRGNPTIETLYAIAGRLG 66 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPY--DPQLCFEHFSIQMASGAISESTPHE 118 VP + P + V SL D E F + + G S H Sbjct: 67 VPIGALLPDPPHPGEKPLETIHGTAVSASLLETFSDADADTELFRLHIRPGHEQLSPAHP 126 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 G +E++ V G + T+ G V + ADV H Y + V+ LI PR Sbjct: 127 PGTVEYLTVFTGTARVGRPDALLTVPPGAHVSWTADVPHTYTAISDDDVYASLLIRTPR 185 >UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=Bacteria RepID=A1AL86_PELPD Length = 192 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 17/192 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + R + + +R+ G + +LAE S+ ++ +E+ E +P++ L KI L Sbjct: 1 MTDRNR-IGDKITTIRESLGLTREQLAERCDCSETVIAGLEQGELAPSLTPLIKITRTLG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQQ----------------AMVITSLFPYDPQLCFEHFSI 104 V T + P V + A+ SL E F I Sbjct: 60 VRLGTLLDDDTMLGPVVTRSGENNGISRVKSLEIASNAGALDFFSLAANKTARHMEPFII 119 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + + E + ++DG +++ + L G+ + + + V H R+ G Sbjct: 120 NVKPACKGGAPLSSHEGEEFIYILDGTVEVEYGKDLYQLEPGDSIYYDSIVPHQLRSRGS 179 Query: 165 QTVHFHSLIHYP 176 + ++++ P Sbjct: 180 DSARILAVVYAP 191 >UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER Length = 196 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 12/177 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ L+ R++ G +L LAE TG++K+ L ++ER S+P++A KIA L+ Sbjct: 1 MAAFLRTHRRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLF 60 Query: 68 SPP-QSATPSVYDPQQQAM---------VITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 S + ++ + + + V + P + F + ++ Sbjct: 61 SDSMEGNAMTIVRAKDRVIDPANSVQSSVYDPIAPSLVGKAMQPFVVH--PASVMGPKFM 118 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 + E V V G ++ + G+ L+ G+ + F A+ H R+ +++ Sbjct: 119 DHTGEEFVFVHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSADRAVVLVVVY 175 >UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=B2JW16_BURP8 Length = 234 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 21/192 (10%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 A L T L+ R + +L LAE G S+++L ++E ++P++ATL +IA L+ + Sbjct: 42 AEGLGTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNIA 101 Query: 65 TFISPPQSATPSVYDPQQQ--------------------AMVITSLFPYDPQLCFEHFSI 104 +S P + + ++ ++++ L P + Sbjct: 102 ALVSGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDIH 161 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + A S+ G E V++G+L+L + E L G+ F + H YRN G+ Sbjct: 162 VLEPLARSDEQISHAG-EELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGD 220 Query: 165 QTVHFHSLIHYP 176 + P Sbjct: 221 VITRVLWINTPP 232 >UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Deinococci RepID=C1XM81_MEIRU Length = 186 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 72/171 (42%), Gaps = 5/171 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ R +G +L ++A+ +G+ K+ + ++ERN ++ +VA+L K+ L++ + Sbjct: 12 IGPRLRAARLAKGLTLEQVAQRSGLDKSFISRLERNATAASVASLLKVCAALDIQPGSLF 71 Query: 68 SPPQSATPSVYDPQQQAM----VITSLFPYDPQLCFEHFSIQMASGAISESTPHE-KGVI 122 PP + + V + + ++ G P+ Sbjct: 72 DPPSTNLVRSGEAPSAHFGGWGVRDFILSRGLRGELMLLRTEIEPGGHGGKEPYSFPSDT 131 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + V V++G L+ + TL G+ + F+ H +RN G+ ++ Sbjct: 132 DVVTVLEGSLEFTIGETRYTLYPGDSLTFSGKEPHTWRNPGKSRAVVLWVL 182 >UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=C3MCD7_RHISN Length = 244 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 76/187 (40%), Gaps = 15/187 (8%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + ++ R++ G ++S +A AT +S ML +IE +SP++ TL +A L VP Sbjct: 53 LEVAIGHEVRAFRKKLGITVSDVAAATDISVGMLSKIENGNTSPSLTTLQTLARALGVPI 112 Query: 64 STFISPPQSATPSVYDPQQQAMVITSLFPYDP--------------QLCFEHFSIQMASG 109 ++F + +V+ + + + + E + I + Sbjct: 113 TSFFRGFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTAGVVVEPYLITLTED 172 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 + + G +E + +++G++ + G+ + F AD H + + Sbjct: 173 S-DVFPTFQHGGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTRLPIRY 231 Query: 170 HSLIHYP 176 S+I YP Sbjct: 232 LSIISYP 238 >UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAK2_OLICO Length = 202 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 12/181 (6%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 ++ L ++ RQQRG SL +LA ATG++K+ L ++ER + P++ T K++ Sbjct: 19 VSSSLGERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTV 78 Query: 64 STFISPP-QSATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + ++ + ++ I ++ P E F ++ Sbjct: 79 GQLLGESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMR-PPHKFH 137 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + V+ GQ+++ L G+ + F + H R+ GE + Sbjct: 138 SDRRFTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPHRSRSIGETRAEALVV 197 Query: 173 I 173 + Sbjct: 198 V 198 >UniRef50_UPI000050F7A7 helix-turn-helix domain-containing protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7A7 Length = 182 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 8/175 (4%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 AR ++ R+ +L+ LA G+S+A L +IER E +V+ ++ L V Sbjct: 9 ARVFGARIRARRKYNDLTLNELAVRAGISRAALSKIERGEQDTSVSNAMGLSRALGVDVG 68 Query: 65 TFISPPQ-----SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES-TPHE 118 ++PP+ SA + + + L PQ E ++ + S H Sbjct: 69 ELLAPPEVVITSSAAIPAHSAYGRGTLRRDL--PAPQENMEVVHYKLDPHCETASFAAHR 126 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G E V+ G +++ TL G+ + DV H N G + +I Sbjct: 127 SGSRETFFVLAGTIEIVTIDRRTTLRVGDCAQAPGDVPHQLSNPGNEPAELMLII 181 >UniRef50_B4SZY7 Transcriptional regulator, XRE family n=57 Tax=Bacteria RepID=B4SZY7_SALNS Length = 182 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 7/167 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M ++ +L + RQ+ G SL+ +A G++K+ L Q+E +P++ TLW + L+ Sbjct: 1 MTQPISVIARSLVRERQRTGLSLAEIARRAGIAKSTLSQLEAGNGNPSLETLWSLCVALD 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISE 113 +PF+ + P T + + +V L P + + + GA Sbjct: 61 IPFARLLEPQVQKTQVIRRGEGTKVVAEQAHYQAILLAACPPGARRDIYLLLTQPGADRI 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 S PH G +EH++V G+ + + + L G+ + + D HI++ Sbjct: 121 SHPHPPGSVEHIIVTQGKALVGLTEAPEELAEGDYICYPGDQAHIFK 167 >UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Bacteria RepID=Q31LK1_SYNE7 Length = 230 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 14/184 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L R+L T+++LRQ+ +++ +++ G+S+ ML +IE ++S ++ TL ++ + L V Sbjct: 21 LCRYLGNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSL 80 Query: 64 STFISP-----------PQSATPSVYDPQQQAMVITSLFPYDP--QLCFEHFSIQMASGA 110 S P+ V + L DP Q CFE F I + + Sbjct: 81 SALFKGYEASSEQVFLVPEGTAKEVVRRGTRNGHTYQLLASDPTAQFCFESFLITLHERS 140 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 E E + V++G++ + L G+ + F +D+ H + + F Sbjct: 141 E-PFAAFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPHGPELLIDLPIRFL 199 Query: 171 SLIH 174 + + Sbjct: 200 ATVF 203 >UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria RepID=A6UEP3_SINMW Length = 234 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 76/188 (40%), Gaps = 15/188 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + ++ R++ G +++ +A AT +S ML +IE +SP++ TL ++ L VP Sbjct: 43 LEVAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPI 102 Query: 64 STFISPPQSATPSVYDPQQQAMVITSLFPYDP--------------QLCFEHFSIQMASG 109 + F + +V+ + + + + E + I + Sbjct: 103 TAFFRRFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTSGVVVEPYLITLTEN 162 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 + T G+ E + +++G++ + G+ + F AD H + + Sbjct: 163 SDIFPTFQHDGL-EFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTTLPIRY 221 Query: 170 HSLIHYPR 177 S+I YPR Sbjct: 222 LSIISYPR 229 >UniRef50_C2ASM9 Predicted transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2ASM9_TSUPA Length = 171 Score = 138 bits (349), Expect = 7e-32, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 4/170 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L++LR +RG SLS LA GV K L +IE +PTV TL+ + L+VP + + Sbjct: 6 VGGRLRELRSERGLSLSELARRAGVGKGSLSEIEAGGRNPTVETLYSLCGPLDVPLTALL 65 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVV 127 + + + ++ P+ + E F ++ + S H V EH+ + Sbjct: 66 GESPGTDSTAHGGMRTVLLSVRHLPH---VTVEVFRLEFPESSDHTSPGHGPAVREHLTL 122 Query: 128 IDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 +DG L + G+ + G+ + +D H + + +I PR Sbjct: 123 VDGALLVGPVGDETVVRQGDSCIWTSDGPHRFAAI-DGPAEAVVVITTPR 171 >UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEN9_9FIRM Length = 188 Score = 138 bits (349), Expect = 8e-32, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 10/179 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L +K R+++ SL LA VS + L QIE ++ P++ TL +I+T L V S + Sbjct: 4 LGMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSKLL 63 Query: 68 SPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 +S + + + + I + +DP E + S P+ Sbjct: 64 GEDESVRLMMIKKESRHRLTNLGDGLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPYTH 123 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVR-FAADVTHIYRNGG-EQTVHFHSLIHYP 176 E V++G++ L VD E + G+ +H + N E+T + + P Sbjct: 124 AGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNPP 182 >UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HHC8_PEPMA Length = 179 Score = 138 bits (348), Expect = 9e-32, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 10/177 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + ++ LR + G + LAE + ++K + Q+ER+ +SP+V +L + L +TF Sbjct: 3 IGEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMATFF 62 Query: 68 SPPQSATPSVYDPQQQA-------MVITSLFPYDPQLCFEHFSIQM-ASGAISESTPHEK 119 S Q+ IT L P E I + G E P E Sbjct: 63 MDKPSVKEIFTKDDYQSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETKEYNPFE- 121 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V++G ++ +D E LN G+ + T + N G + ++ P Sbjct: 122 -GEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMSPP 177 >UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=A1BAD5_PARDP Length = 213 Score = 138 bits (348), Expect = 9e-32, Method: Composition-based stats. Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + LK+LR S +LAEA+GV + IE SSP+VA+L KI GL Sbjct: 22 MSDFD--VGARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLG 79 Query: 61 VPFSTFISPPQSATPS-VYDPQQQAMVITSLFP-------------------YDPQLCFE 100 V S F P +P + P + + + L+ ++ Q+ E Sbjct: 80 VTMSEFFEPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILHE 139 Query: 101 HFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR 160 + GA + T E +V+ G+++L V + + L G+ FA+ H +R Sbjct: 140 RYE----PGADTGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFR 195 Query: 161 NGGEQTVHFHSLIHYP 176 N ++ S P Sbjct: 196 NVSDREAVVVSACTPP 211 >UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2 Tax=Bacteria RepID=C1ZLV1_PLALI Length = 189 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 12/178 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L+ +K R + +L ++A TG++++ ++E +P++ +L +IA L V S + Sbjct: 6 LAQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSDLV 65 Query: 68 S-----------PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 +P+ +V SL P + F + + +G + Sbjct: 66 EGLDRKPQMAVIRKSERKVVERNPETSDIVYESLAHVRPDRAMDPFLLTVPAGGQRK-DA 124 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E ++V+ G++ L + E L G+ + F A H N + + Sbjct: 125 LGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCVFY 182 >UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC19_9RHIZ Length = 218 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 14/185 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + +K+ R + +L+ L+ G+S AML +IE + ++ L ++ + + Sbjct: 33 LESRIGAVIKRRRAEANLTLADLSAGAGLSSAMLSRIENGMAMASLDALERLCAAVGIGL 92 Query: 64 STFISP---PQSATPSVYDPQQQAMVI--------TSLFPYD--PQLCFEHFSIQMASGA 110 + + V +Q +V L YD P+ FE F I+M + Sbjct: 93 GDLFKETDTQRGSAQLVKRAEQMEVVRVGTKFGHTYRLLAYDRGPRKLFEPFFIEMDKKS 152 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 S G E + ++ G+++ + G+ F+ DV H + + F Sbjct: 153 ESYPRFSHPGT-EFIYMLQGRMEYRFGDRTYLVEPGDAFTFSGDVVHGPEKLLDDRIRFL 211 Query: 171 SLIHY 175 ++I Y Sbjct: 212 AIIFY 216 >UniRef50_D1SYA6 Transcriptional regulator, XRE family n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1SYA6_9BURK Length = 189 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 4/172 (2%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ F+S L++LR + G S LAEA G+S+ M+ +E +++ ++A+L ++A L V Sbjct: 13 NVLAFVSENLRRLRAEAGLSQLALAEAAGLSRRMISSLEAGDTNISLASLDRLAAALGVG 72 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITS---LFPYDPQ-LCFEHFSIQMASGAISESTPHE 118 F +S P + + V + S L Y P + +S +A G Sbjct: 73 FVALVSDPSARSQRVDALAWKGKSKDSRGVLLGYVPATREAQLWSWALAPGETYHGQADP 132 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 G E V V+ G L L + E T+ G+ +++ ++ N G + + F Sbjct: 133 AGWHEMVFVVAGTLALRFEHEVVTVAAGDYCIYSSAQDYVCENAGTEMLRFV 184 >UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14 Length = 203 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 9/172 (5%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF-- 66 LK +R+ S LA +GV+ A + IE+N SP++++L K+ G+ + + F Sbjct: 25 GARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLADFFT 84 Query: 67 ISPPQSATPSVYDPQQQAMVITS------LFPYDPQLCFEHFSIQMASGAISESTP-HEK 119 P V+ Q + + + P Q A GA S P Sbjct: 85 FDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPIVHS 144 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E +V G ++L +DG+ L G+G F + H +RN G+ S Sbjct: 145 EGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIIS 196 >UniRef50_B2TDB5 Transcriptional regulator, XRE family n=5 Tax=Bacteria RepID=B2TDB5_BURPP Length = 190 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 9/179 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + R ++ L+ LR +R WSL LA+ +GVS+A L ++E SPT L K+ +P Sbjct: 11 IDRRIAQRLRALRAERNWSLDELAKLSGVSRATLSRLENAAVSPTANVLGKLCVAYGLPM 70 Query: 64 STFISPPQSATPSVYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASG-AISES 114 S + + + Q + S+ P L E ++ +G I+ Sbjct: 71 SRLMHMVEEDFAPLVPRAAQPLWTDASVGFRRRSVSPPAQALSGEALECELDAGVQIAYD 130 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G+ H++++DG+L + VDG+ L G+ +R+ + + I Sbjct: 131 ASPRPGLEHHLILLDGELQITVDGQSHGLQPGDCLRYQLFGPSAFVTPAHSGARYLLFI 189 >UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3 Tax=Burkholderia RepID=Q13H28_BURXL Length = 204 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LR +G S++ LA GVS + Q+ERN+++P+V L ++ L VP + + Sbjct: 19 VGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTALL 78 Query: 68 SPPQSATPSVYDPQQQAMVITSLF------------PYDPQLCFEHFSIQMASGAISEST 115 + + + + LF + I + +G+ SE Sbjct: 79 EEDDAVSDPITGDFVRKAAERPLFEVGKNGMQKELLSPHGDHDLQMMIIMLPAGSGSEEV 138 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G + +V++G + L V L G+ +F + V H RN +T +++ Sbjct: 139 LVGIG-EKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLLWIMNT 197 >UniRef50_C0C444 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C444_9CLOT Length = 199 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 5/171 (2%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + + +++ R+++G +L +L+EATG+S L +ERN +SPT+ + KI Sbjct: 19 NDIQLIGYSIRSQRRKKGMTLQQLSEATGLSIGYLSNLERNANSPTLVNIQKICEAFGTS 78 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITS----LFPYDPQL-CFEHFSIQMASGAISESTPH 117 + + + V +++ ++ L D L + + + Sbjct: 79 LFSLLEMNKEEDIIVRHNEREPIISEEHNMKLENIDFGLDDTSFIYMTIEPDGAGDGLWW 138 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 E E VI G+L L +D + L+ G+ + A H Y N +++ Sbjct: 139 EHEYHEVGTVIKGRLTLKLDNQVFELDEGDTILIKAHTRHCYYNKTQESCV 189 >UniRef50_A4X7C8 Helix-turn-helix domain protein n=1 Tax=Salinispora tropica CNB-440 RepID=A4X7C8_SALTO Length = 203 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 7/178 (3%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +LAR + + + +LR G SL+ LA A +SK L IE+ +PT++TLW +AT L VP Sbjct: 24 DLARTVGSNVHRLRNTAGMSLADLATAGDISKTTLHGIEQGHGNPTLSTLWALATALRVP 83 Query: 63 FSTFISPPQSATPSVYDPQQQAMVI------TSLFPYDPQLCFEHFSIQMASGAISESTP 116 + P T V Q+ + L E + I +A ST Sbjct: 84 LGELLETPTPRTDVVRADDQRPRISGDAVSARLLHRIRLHGTVEVYDIDVA-QTTQHSTA 142 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H GV E +++ G + TL + +RF A+ H Y+ G+ ++H Sbjct: 143 HLPGVQECLILTHGSITTGPTDAAVTLTAHDSIRFDANHRHQYQGHGQHNRAVLIMLH 200 >UniRef50_A4AL40 Putative regulatory protein n=2 Tax=Actinobacteria (class) RepID=A4AL40_9ACTN Length = 195 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 3/166 (1%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ L++ RQ + +L LA+ATG+SK+ L ++E + P++ L + L+VP + Sbjct: 14 IAPRLRRARQNKNLTLDDLAQATGISKSTLSRLESGQRKPSLELLLPVVAALSVPLDQIV 73 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPYDPQLCF-EHFSIQMASGAISESTPHEKGVIEHVV 126 + P+ A P V +A L P L + F I +A+ E T G E + Sbjct: 74 TSPRIADPRVAQKSTRADG-RMLTPLSQHLGKPQAFKITIAA-TDGEPTLRTHGGYEWIY 131 Query: 127 VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 V++G+L L + + GE F H + + G V S+ Sbjct: 132 VLEGRLRLVLGEHDIVMGTGEAAEFDTKNPHWFGSSGNGPVEILSM 177 >UniRef50_B7GVK0 Helix-turn-helix family protein n=11 Tax=Acinetobacter RepID=B7GVK0_ACIB3 Length = 183 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 5/175 (2%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + + T ++ LR + S LA+ GVS+ + +E + + ++A L IA L V F T Sbjct: 9 QHVGTNIRSLRDEHSLSQQDLADRAGVSRRTIAALETGQVNISLAKLDAIAAVLGVDFRT 68 Query: 66 FISPPQSATPSVYDP-----QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 +S P+ ++ + Q++ T L + E ++ +A G + +G Sbjct: 69 IVSAPELKEHALVNALAWQGQKEESKATFLASVPSRSQVELWTWSLAVGESYVAEADAEG 128 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + V++G+L + +T+ G FA+ VT+ Y N G Q + F + Y Sbjct: 129 WQELIYVLEGELTIQFTDSSKTIAAGSSFIFASSVTYTYINSGSQVLKFIRNVVY 183 >UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus RepID=Q0S834_RHOSR Length = 187 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 7/179 (3%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 LA + T ++ R G +L +A TG+S+ L Q E S P+V L ++A L Sbjct: 8 LAVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVAQVLGTTA 67 Query: 64 STFISPPQSATPSVYDPQQQAMVITS-----LFPYDPQLCFEHFSIQMASGAISESTPHE 118 + S+ ++ S F E + G+ + E Sbjct: 68 HALLEQGARTPTSLVRSREGRRFALSDGAVLRFCSTGVRAMEPNEVTAQPGSQAGEHT-E 126 Query: 119 KGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E + VIDG + + V E L+ G+ + + A V H + N + F P Sbjct: 127 HAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFLITSTPP 185 >UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA Length = 185 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 74/180 (41%), Gaps = 10/180 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + + +K++R ++G L +AE +S +ML QIE+ ++P++ T+ IA L +P Sbjct: 2 DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61 Query: 63 FSTFISPPQSA--TPSVYDPQQQAM-----VITSLFPYDPQLCFEHFSIQM-ASGAISES 114 F P+ + ++ + + + + L + E + A + Sbjct: 62 LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPTNIECMKMTFTEKNAETSI 121 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR--NGGEQTVHFHSL 172 P E +++ G++ + + + + G+ V A H + N GE V F Sbjct: 122 EPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSVT 181 >UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio RepID=A6CYI2_9VIBR Length = 185 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 12/187 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N + + QLR++RG S LAE G++ + + IE + SP+V++L KI + Sbjct: 1 MDN--HQIGKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFS 58 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVIT--------SLFPYDPQLCFEHFSI-QMASGAI 111 + S F + Q + + +I L F I + + Sbjct: 59 LSLSEFFTLEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNST 118 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + ++ + E V+ G+++L +GE + GE + H + N ++ S Sbjct: 119 TGASNIKHEGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMIS 178 Query: 172 LIHYPRS 178 H P++ Sbjct: 179 A-HTPKA 184 >UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN Length = 185 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 68/177 (38%), Gaps = 10/177 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + LKQLR ++G + LA +SK + Q+ER+ +SP++ATL I L F Sbjct: 9 IGEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNLKDFF 68 Query: 68 SPPQSA-----TPSVYDPQQQA--MVITSLFPYDPQLCFEHFSIQMASGAISES-TPHEK 119 + + +++ + + + P + E + + ++ PHE Sbjct: 69 NNDEEEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKNMMEPILVTLEPNGQYKNDEPHE- 127 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V+ G + + + + GE + A H N G+ + P Sbjct: 128 -GEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVSTPP 183 >UniRef50_UPI0001C36321 DNA-binding protein, putative n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36321 Length = 162 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 7/150 (4%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQ-------AMVIT 88 MLGQIER +SSPT+ TLWKIATGL +P S + S +Q M Sbjct: 11 MLGQIERGQSSPTINTLWKIATGLKIPLSLLLEEQSSEYTIAAAEEQNVILEDNGRMKAY 70 Query: 89 SLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEG 148 +F YDP E F I S H GV E V V+ G L L ++G+ + + Sbjct: 71 PIFAYDPIRSVESFYITFEPDCKHTSDKHNDGVEEQVFVLHGSLQLVLNGKTIIVTENQA 130 Query: 149 VRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +RF AD+ H Y N + + +I Y ++ Sbjct: 131 IRFHADIPHEYNNPFADSCTVYDMIFYSKN 160 >UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGL3_SANKS Length = 204 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + L T++ R+Q S+ LA+ GVS ++ Q+ER +P++ ++ ++A+ L V Sbjct: 18 DTVAMLGATVRAARKQLDLSVQALAQRAGVSLGLVSQLERGLGNPSLHSIQRLASALGVS 77 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHF-----------SIQMASGAI 111 + + PP V + + + P D Q E + Sbjct: 78 VTRLLEPPAEELVVVRAGRPHVLPLAPGTPDDGQAVRELLSPRGETAIQLIRTTLPPAFT 137 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + P E V V+ G L + L G+ + H + NG + Sbjct: 138 NVERPFRHLGTETVTVLSGVLHITHGDREIELGAGDTATYGCSTPHWWANGHDGETVVL 196 >UniRef50_A9ADC6 Transcriptional regulator, XRE family n=61 Tax=Bacteria RepID=A9ADC6_BURM1 Length = 224 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ +++LR RG++L LA GVS++M+ IER +SPT L K+A GL + Sbjct: 33 INERIARRVRELRTLRGYTLDALAARCGVSRSMISLIERAAASPTAVVLDKLAAGLGISL 92 Query: 64 STFI--SPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAI--S 112 + A P V QQ +L P + + GA Sbjct: 93 AGLFGGDDGAPAQPLVRRAQQAEWRDPASGYARRNLSPPGWPSPLQLVEVDFPPGARVAY 152 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ++ E + + V+ G++D+ + L+ G+ + D I+ N + Sbjct: 153 DTGAREIAWHQQIWVVRGRIDVTLGATLHQLHEGDCLAMRLDQPLIFSNPSLHAARYIVA 212 Query: 173 I 173 I Sbjct: 213 I 213 >UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UAQ2_METS4 Length = 207 Score = 135 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 11/168 (6%) Query: 20 GWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI-SPPQSATPSVY 78 G SL +A TG+S L Q+ER SSP++ L ++A L V ++ + P A P V Sbjct: 38 GLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLASLFGAAPGPAEPIVT 97 Query: 79 DPQQQAMVITSLFPYDPQLC--------FEHFSIQMASGAISESTPHEKGVIEHVVVIDG 130 P ++A + QL F +++A GA + G E +V++G Sbjct: 98 RPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDEALTHGGEEAGLVLEG 157 Query: 131 QLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG--EQTVHFHSLIHYP 176 +L L V+ +L G+ RFA+ H Y N ++ V P Sbjct: 158 RLALWVEDAALSLAAGDSFRFASRRPHRYGNPSETDEAVVLWVNAVPP 205 >UniRef50_B1MI43 Hypothetical transcriptional regulator n=1 Tax=Mycobacterium abscessus ATCC 19977 RepID=B1MI43_MYCA9 Length = 185 Score = 135 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 8/180 (4%) Query: 1 MENLARF---LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIAT 57 M+N + L++LR + G SL+ LA +GV K + ++E + + TL+ + Sbjct: 1 MDNDQSAPAEVGARLRRLRTEAGLSLAELATRSGVGKGSISELENGRRTARLDTLFALTK 60 Query: 58 GLNVPFSTFIS-PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 L P S + P + PSV+ A+ ++ D E + I + + S Sbjct: 61 ALGAPLSAAVGVSPPADGPSVHGQAVHAVSLSGWQTDDGY--VEVYRITVET-TTQHSPA 117 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 H GV E + V+ G L+ G+ Q GE + F +V H+YR +HYP Sbjct: 118 HATGVRETITVVAGTLEAGPLGDPQIAAAGETMCFPGNVPHVYRAV-NGPAEAVLTMHYP 176 >UniRef50_A6V7P4 DNA-binding protein n=45 Tax=Bacteria RepID=A6V7P4_PSEA7 Length = 258 Score = 135 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 7/176 (3%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L+ ++K+ R++ G S+S LA+ G++K+ L Q+E +P++ TLW +A L+V + Sbjct: 83 LLAASIKRERERLGLSISELAKRAGIAKSTLSQLEAGVGNPSLETLWALAMALDVQVTRL 142 Query: 67 ISPPQSATPSVYDPQ------QQAMVITSLFPYDP-QLCFEHFSIQMASGAISESTPHEK 119 I+ P+S + + +QA +L P + + + + + GA S PH Sbjct: 143 IAQPRSRVQVIRADEGATVASEQAHYAATLLAVCPAGVQRDLYRLVVEPGAPRLSDPHLP 202 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G +EHVV+ G+ L G L+ G+ ++AD H++ +T + H Sbjct: 203 GTLEHVVICHGRARLGPVGHPVELSAGDYASYSADEAHMFEALEARTTAVMLIEHT 258 >UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMW2_9PROT Length = 218 Score = 135 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 13/188 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++ + + ++ R R +L LA G+S + L ++ER + +V L +IA L Sbjct: 4 IDQSLQRIGDAIRDRRTSRRMTLGDLAARCGLSVSFLSRVERGHAQSSVGNLIRIADALG 63 Query: 61 VPFSTFISPPQSATPS----VYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMAS 108 I PP + T V+ + T + E +++++ Sbjct: 64 GTIHDLIGPPDATTADHGFAVFRSAESMPRAIPATGYRWTPVSTGGAGRAIEATLLELSA 123 Query: 109 GAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 +++ G E V++G++ V L G+ + +D+ H G+ Sbjct: 124 AGSADTRFAHPG-EEICFVLEGRVRFVVGERTTLLEPGDAIHLRSDIPHTAEAAGDAPAR 182 Query: 169 FHSLIHYP 176 + H+P Sbjct: 183 VLMMTHHP 190 >UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2V3_9SPHI Length = 194 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 19/187 (10%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+L + +K +R+++GW L A+ +G+S AML +IE PT+ +L +I LN+ Sbjct: 5 EHLTIQIGNKIKGIRKEKGWKLGEFADKSGMSIAMLSKIENGRVIPTIPSLMQIINTLNL 64 Query: 62 PFSTFISP---PQSATPSVYDPQQQAMVITSL-------------FPYDPQLCFEHFSIQ 105 + F S ++ ++ + ++ FP D + E + Sbjct: 65 NLADFFSDLKVDGDFNGFIFRKKEDYVSLSKEEDSVGYHYQMILNFPID-KASMEISLLT 123 Query: 106 MASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + S A E E++ +I G+L + E + G+ + F ++ H+ +N Sbjct: 124 LDSHAQREKL--STSGFEYIYLIKGKLTYELGDETLEMEEGDSLFFDGEMPHVPKNTQSN 181 Query: 166 TVHFHSL 172 + Sbjct: 182 EAILLVV 188 >UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XR14_CLODC Length = 181 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 12/183 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M +L L + ++R+++ S+ LA+ V+ ++L QIER ++P+V +L IA+ LN Sbjct: 1 MNDLN--LGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58 Query: 61 VPFSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAIS 112 VP TF + + VI + D E + +A S Sbjct: 59 VPLFTFFVSEVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGNLEFAIMDLAPNTSS 118 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN--GGEQTVHFH 170 E V++G++ L +D + TL+ G+ V+ H ++N E V F Sbjct: 119 CIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIFA 178 Query: 171 SLI 173 ++ Sbjct: 179 VIL 181 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77626 Uncharacterized HTH-type transcriptional regulat... 213 2e-54 UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=S... 199 2e-50 UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulat... 196 3e-49 UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Fi... 193 2e-48 UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacill... 192 4e-48 UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacil... 192 5e-48 UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1... 192 6e-48 UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostrid... 191 8e-48 UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria... 190 2e-47 UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Cl... 190 2e-47 UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD 189 3e-47 UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=M... 189 4e-47 UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0... 187 1e-46 UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin... 186 2e-46 UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q... 184 9e-46 UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Deni... 184 9e-46 UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staph... 184 9e-46 UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Cl... 184 1e-45 UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Deni... 183 2e-45 UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Cl... 183 2e-45 UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae Re... 183 3e-45 UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina ... 182 3e-45 UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales ... 182 5e-45 UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax... 181 9e-45 UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clost... 180 2e-44 UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Ha... 179 4e-44 UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=C... 179 4e-44 UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseo... 179 5e-44 UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=... 179 5e-44 UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Pr... 178 8e-44 UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=ga... 177 9e-44 UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=De... 176 2e-43 UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=De... 176 2e-43 UniRef50_D2BA96 Putative transcriptional regulator, XRE family n... 176 2e-43 UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira Rep... 176 2e-43 UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin... 176 3e-43 UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Auranti... 176 3e-43 UniRef50_UPI0001B57A23 transcriptional regulator, XRE family pro... 175 5e-43 UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=B... 175 6e-43 UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum... 175 6e-43 UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Me... 175 6e-43 UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea... 175 7e-43 UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Th... 174 8e-43 UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=... 174 9e-43 UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Ge... 174 9e-43 UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicu... 174 1e-42 UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7... 174 1e-42 UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=F... 174 2e-42 UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax... 173 2e-42 UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Ba... 173 3e-42 UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clost... 173 3e-42 UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax... 173 3e-42 UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacteriu... 172 4e-42 UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Ch... 172 4e-42 UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clos... 172 4e-42 UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Ar... 172 4e-42 UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin... 171 7e-42 UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Bu... 171 7e-42 UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B... 171 8e-42 UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus claus... 171 8e-42 UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacte... 171 9e-42 UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH... 171 1e-41 UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus ... 171 1e-41 UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rh... 171 1e-41 UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rh... 171 1e-41 UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax... 170 2e-41 UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacill... 169 3e-41 UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin... 169 3e-41 UniRef50_B1HN87 Transcriptional regulator n=2 Tax=Bacillaceae Re... 169 3e-41 UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostri... 169 3e-41 UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Pr... 169 4e-41 UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=De... 169 5e-41 UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=... 168 6e-41 UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=... 168 6e-41 UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Sy... 168 7e-41 UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Be... 168 9e-41 UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax... 167 1e-40 UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin... 167 2e-40 UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria ... 166 2e-40 UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Ci... 166 2e-40 UniRef50_Q49XM3 Predicted transcriptional regulator n=1 Tax=Stap... 166 3e-40 UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=My... 166 3e-40 UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Cl... 166 3e-40 UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin... 166 4e-40 UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Th... 166 4e-40 UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=De... 166 5e-40 UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rh... 166 5e-40 UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Bu... 165 5e-40 UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=D... 165 5e-40 UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7... 165 6e-40 UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin... 165 7e-40 UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahe... 165 8e-40 UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostri... 164 1e-39 UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=B... 164 1e-39 UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein... 164 1e-39 UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pi... 164 1e-39 UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rh... 164 2e-39 UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin... 164 2e-39 UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseu... 163 2e-39 UniRef50_A8U412 Transcriptional regulator, XRE family with cupin... 163 2e-39 UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID... 163 2e-39 UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cel... 163 2e-39 UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=B... 163 3e-39 UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Stre... 163 3e-39 UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Mi... 163 3e-39 UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=P... 162 4e-39 UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin... 162 4e-39 UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales ... 162 4e-39 UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein... 162 4e-39 UniRef50_Q484W4 DNA-binding protein n=1 Tax=Colwellia psychreryt... 162 5e-39 UniRef50_Q2BZH4 Transcriptional regulator, HTH_3 family protein ... 162 6e-39 UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=B... 161 7e-39 UniRef50_C0C4F2 Putative uncharacterized protein n=2 Tax=Clostri... 161 8e-39 UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium a... 161 8e-39 UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n... 161 8e-39 UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizob... 161 8e-39 UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin... 161 9e-39 UniRef50_A6F756 DNA-binding protein n=1 Tax=Moritella sp. PE36 R... 161 9e-39 UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Ve... 161 1e-38 UniRef50_C1ZLV1 Putative transcriptional regulator with cupin do... 161 1e-38 UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Op... 161 1e-38 UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin... 161 1e-38 UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Pr... 160 1e-38 UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=A... 160 1e-38 UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusob... 160 1e-38 UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=De... 160 1e-38 UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodoba... 160 2e-38 UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerot... 160 2e-38 UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin... 160 2e-38 UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium ... 160 2e-38 UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodo... 160 2e-38 UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin... 160 2e-38 UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxid... 159 3e-38 UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rh... 159 3e-38 UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae Re... 159 3e-38 UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Borde... 159 3e-38 UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Me... 159 3e-38 UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Ba... 159 4e-38 UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C... 159 4e-38 UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Ca... 159 4e-38 UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopi... 159 5e-38 UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kl... 159 5e-38 UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin... 158 6e-38 UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hy... 158 6e-38 UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin... 158 7e-38 UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=De... 158 7e-38 UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzi... 158 9e-38 UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Ac... 157 1e-37 UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia mag... 157 1e-37 UniRef50_C5RJ85 Transcriptional regulator, XRE family n=1 Tax=Cl... 157 2e-37 UniRef50_C4Z9Q8 Putative uncharacterized protein n=3 Tax=Clostri... 157 2e-37 UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax... 157 2e-37 UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Dein... 157 2e-37 UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=R... 157 2e-37 UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Pa... 156 2e-37 UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepI... 156 3e-37 UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizob... 156 3e-37 UniRef50_Q6MKI2 Putative DNA-binding protein n=1 Tax=Bdellovibri... 156 3e-37 UniRef50_A5V718 Transcriptional regulator, XRE family with cupin... 156 4e-37 UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0... 155 4e-37 UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macroco... 155 4e-37 UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=My... 155 5e-37 UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteoba... 155 5e-37 UniRef50_A9FKR7 DNA-binding protein n=2 Tax=Myxococcales RepID=A... 155 5e-37 UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Aci... 155 6e-37 UniRef50_B8IHD2 Transcriptional regulator, XRE family n=13 Tax=A... 155 6e-37 UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Ac... 155 7e-37 UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin... 155 7e-37 UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Al... 155 7e-37 UniRef50_C9KMM8 Putative transcriptional regulator n=1 Tax=Mitsu... 155 8e-37 UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 ... 155 8e-37 UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxid... 154 9e-37 UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Bu... 154 9e-37 UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Ocean... 154 1e-36 UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Ac... 154 1e-36 UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vi... 154 1e-36 UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Pr... 154 1e-36 UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B... 154 1e-36 UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Pr... 154 1e-36 UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax... 154 1e-36 UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=P... 154 1e-36 UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin... 154 2e-36 UniRef50_UPI00016A6284 transcriptional regulator, XRE family pro... 154 2e-36 UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin... 154 2e-36 UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepI... 154 2e-36 UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1... 154 2e-36 UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=R... 153 2e-36 UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin... 153 2e-36 UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agroba... 153 2e-36 UniRef50_A6G914 Transcriptional regulator, XRE family with cupin... 153 3e-36 UniRef50_B8EMC1 Transcriptional regulator, XRE family n=1 Tax=Me... 153 3e-36 UniRef50_B7IJ03 DNA-binding protein n=74 Tax=Bacillus RepID=B7IJ... 153 3e-36 UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pa... 152 3e-36 UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepI... 152 3e-36 UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=... 152 4e-36 UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizo... 152 4e-36 UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=De... 152 5e-36 UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin... 152 6e-36 UniRef50_A1JM20 Putative DNA-binding protein n=1 Tax=Yersinia en... 152 6e-36 UniRef50_C9NG53 Transcriptional regulator, XRE family n=3 Tax=Ac... 151 7e-36 UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rh... 151 8e-36 UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin... 151 8e-36 UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax... 151 8e-36 UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=De... 151 8e-36 UniRef50_A3DCV9 Transcriptional regulator n=3 Tax=Clostridium th... 151 9e-36 UniRef50_D0LSP1 Transcriptional regulator, XRE family n=1 Tax=Ha... 151 1e-35 UniRef50_B4RY23 Transcriptional regulator, HTH_3 family protein ... 151 1e-35 UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin... 151 1e-35 UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin... 151 1e-35 UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Ma... 150 1e-35 UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rh... 150 1e-35 UniRef50_C9ZEI0 Putative DNA-binding protein n=1 Tax=Streptomyce... 150 2e-35 UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Deni... 150 2e-35 UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rh... 150 3e-35 UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=... 149 3e-35 UniRef50_B2PVG1 Putative uncharacterized protein n=1 Tax=Provide... 149 3e-35 UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B... 149 4e-35 UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacter... 149 4e-35 UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=... 149 4e-35 UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales ... 149 4e-35 UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Ta... 149 4e-35 UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enter... 149 4e-35 UniRef50_UPI00005895B5 truncated transcriptional regulator n=1 T... 149 4e-35 UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax... 149 5e-35 UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sph... 149 5e-35 UniRef50_C2LK61 Transcriptional regulator n=4 Tax=Enterobacteria... 149 5e-35 UniRef50_B1HMP7 Transcriptional regulator n=2 Tax=Bacillaceae Re... 149 5e-35 UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sang... 149 6e-35 UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobac... 148 7e-35 UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales Re... 148 7e-35 UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Vi... 148 8e-35 UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hy... 148 8e-35 UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostri... 148 9e-35 UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Na... 148 9e-35 UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria... 147 1e-34 UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=F... 147 1e-34 UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=... 147 1e-34 UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Pa... 147 1e-34 UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostri... 147 1e-34 UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Bu... 147 1e-34 UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rh... 147 2e-34 UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein... 147 2e-34 UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=De... 147 2e-34 UniRef50_A4FBL3 Transcriptional regulator, Cro/CI family n=2 Tax... 147 2e-34 UniRef50_A4AL40 Putative regulatory protein n=2 Tax=Actinobacter... 147 2e-34 UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clost... 147 2e-34 UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bord... 147 2e-34 UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium sm... 147 2e-34 UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 ... 146 2e-34 UniRef50_D2JL57 DNA-binding protein, putative n=1 Tax=Staphyloco... 146 2e-34 Sequences not found previously or not previously below threshold: >UniRef50_P77626 Uncharacterized HTH-type transcriptional regulator ydcN n=54 Tax=Enterobacteriaceae RepID=YDCN_ECOLI Length = 178 Score = 213 bits (543), Expect = 2e-54, Method: Composition-based stats. Identities = 178/178 (100%), Positives = 178/178 (100%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN Sbjct: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG Sbjct: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS Sbjct: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 >UniRef50_B5FUU1 Transcriptional regulator, XRE family n=30 Tax=Salmonella enterica RepID=B5FUU1_SALDC Length = 185 Score = 199 bits (508), Expect = 2e-50, Method: Composition-based stats. Identities = 129/177 (72%), Positives = 151/177 (85%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+NL +L+TTL+ LR QRGWSLSRLAE +GVSKAMLGQIERNESSPTVATLWKIATGLN Sbjct: 8 MDNLTHYLATTLRMLRHQRGWSLSRLAEISGVSKAMLGQIERNESSPTVATLWKIATGLN 67 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 VPFS FISPPQ+ P +DPQQQAMVIT LFP+DP+LCF++FS+ +A G +SESTPH+ G Sbjct: 68 VPFSMFISPPQAEFPPTFDPQQQAMVITPLFPWDPELCFDYFSLLLAPGTVSESTPHKAG 127 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 VIEHVVVI G+LD+C G WQT++ G+G+RFA D H YRN +QTVHFHSLIHYPR Sbjct: 128 VIEHVVVIQGRLDMCTGGVWQTIDAGKGLRFAGDTAHTYRNSSDQTVHFHSLIHYPR 184 >UniRef50_C9Y503 Uncharacterized HTH-type transcriptional regulator ydcN n=2 Tax=Cronobacter RepID=C9Y503_CROTZ Length = 204 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 105/174 (60%), Positives = 129/174 (74%), Gaps = 1/174 (0%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 ++ L+ TLK LRQQ+ WSL++ A+ TGVSKAMLGQIERNESSPTVATLWKIATG NVP Sbjct: 30 DITAHLAQTLKALRQQKNWSLTQAAQETGVSKAMLGQIERNESSPTVATLWKIATGFNVP 89 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 FS FI+PP +V+D QQ M++ LFP+D QL F+ ++ +A GA S+STPHE GV Sbjct: 90 FSVFITPPAPGARTVFDA-QQTMLVEPLFPWDEQLRFDMLAVTLAPGAQSDSTPHENGVT 148 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EHVVVI+G+L+L DG W+ L GEG++FA D H YRN V FHSLIHYP Sbjct: 149 EHVVVIEGELELQTDGVWRRLGPGEGLKFAGDRPHAYRNATPLPVRFHSLIHYP 202 >UniRef50_C6Q1A6 Transcriptional regulator, XRE family n=2 Tax=Firmicutes RepID=C6Q1A6_9CLOT Length = 184 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + L +R+Q+G SL ++AE TGVSK ML QIE+ S+PTV TLWKIATGLN Sbjct: 1 MKDFNLIIGKNLNNIRRQKGLSLDKVAELTGVSKGMLAQIEKGISNPTVTTLWKIATGLN 60 Query: 61 VPFSTFISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS F+ V + M++ LFPYD FE F+I++ G + Sbjct: 61 VSFSYFMEEENREIVYVSHNNIKPILENDKKMMVYPLFPYDNTRRFEVFTIELEPGCNHK 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH +G E++VV G+++ + L+ G+ +R+ A+ H YRN + V F +I Sbjct: 121 SVPHNEGTEEYIVVAKGEMEAVIGDLVYKLSYGDAIRYFANKPHCYRNTTNEIVIFQHII 180 Query: 174 HY 175 +Y Sbjct: 181 YY 182 >UniRef50_C0ZDG4 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDG4_BREBN Length = 185 Score = 192 bits (489), Expect = 4e-48, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + +K++R++R SL + +E TGVSK MLGQIER +S+PT+ TLWKIA+GL Sbjct: 1 MEEFHTNIGENIKRIRKERNLSLDKTSEITGVSKTMLGQIERGKSAPTITTLWKIASGLR 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + FS+ IS + V + + L PY+P+ FE FS+ + G Sbjct: 61 LSFSSLISQYKPNVTIVKKKEVNPIIENDGQYRVYPLVPYNPEQQFEIFSVTLEPGCEHI 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH GV E ++V +G L++ V+ + + + + F AD HIY+N G++ V +I Sbjct: 121 AEPHTTGVEEFILVNEGTLEVVVNEQIYVVEPEDTLIFKADRPHIYQNNGDRIVKCSVII 180 Query: 174 HY 175 HY Sbjct: 181 HY 182 >UniRef50_Q65LQ1 Putative transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65LQ1_BACLD Length = 183 Score = 192 bits (488), Expect = 5e-48, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 101/183 (55%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M ++ + ++ +K+LR+ R +SL +L+ TGVSK ML QIE+ SSPT+ TLWKIA GL Sbjct: 1 MNSIEKQVAENIKRLRKIRNYSLDQLSSMTGVSKGMLAQIEKGSSSPTITTLWKIANGLQ 60 Query: 61 VPFSTFISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F++ P V ++ FP+D + FE F I++A G + E Sbjct: 61 VSFTSLAERPAGEPTVVRKHEKTPVMAGEEKYAAFPHFPFDQKKKFEIFYIELAPGCVHE 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH G+ E+V+V G L + LN G+ + F A+ H Y+N EQT ++LI Sbjct: 121 SEPHHGGIEEYVLVSKGALAVTAGDYTCDLNEGDAMHFTANTVHTYKNNTEQTASCYTLI 180 Query: 174 HYP 176 +YP Sbjct: 181 YYP 183 >UniRef50_UPI000178AA45 transcriptional regulator, XRE family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA45 Length = 189 Score = 192 bits (488), Expect = 6e-48, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + + + L+ +R+ RG SL +AE TGVSKAMLGQIER +S+PT++ LW+I +GL Sbjct: 1 MEPIHKKVGRNLQAIRKSRGLSLDNVAELTGVSKAMLGQIERGDSNPTISVLWRIVSGLG 60 Query: 61 VPFSTFISPPQSATPSV-------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F+T I ++ V + + A + LF Y+ + FE + + M G Sbjct: 61 ISFTTLIEEAETEVTVVSPDDVEPFHEAEGAYRVYPLFSYNLRTKFESYMVIMDPGCDHG 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H GV E++ V G+L+L + E T+ G V F+A+ H Y N G +T F+++I Sbjct: 121 SEAHNDGVEEYIFVHQGELELWREDESYTVPAGSSVHFSANRPHRYVNPGNETTKFYTII 180 Query: 174 HY 175 Y Sbjct: 181 FY 182 >UniRef50_A6LSV7 Helix-turn-helix domain protein n=7 Tax=Clostridium RepID=A6LSV7_CLOB8 Length = 184 Score = 191 bits (486), Expect = 8e-48, Method: Composition-based stats. Identities = 74/184 (40%), Positives = 107/184 (58%), Gaps = 7/184 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M NL + + LK++R +R SL A+ TGVSKAMLGQIER +S+PTV+TLWKI+TGL Sbjct: 1 MRNLNSIIGSKLKEIRNKRELSLDEAAKLTGVSKAMLGQIERGQSNPTVSTLWKISTGLK 60 Query: 61 VPFSTFISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS FI Q V M + +FP+D FE F+I++ SG Sbjct: 61 VSFSFFIDEEQDELEIVDQNNIDPIIEDDARMKLYPIFPFDANRGFEIFTIELESGCNHV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 STPH GV E+++V G++++ +D + +L G ++F A++ H YRN + F ++I Sbjct: 121 STPHSDGVEEYIIVTQGEVEIDIDDQKYSLQKGNSIKFVANIPHKYRNVSREKAIFQNII 180 Query: 174 HYPR 177 Y R Sbjct: 181 LYFR 184 >UniRef50_A0KQ29 DNA-binding protein n=42 Tax=Gammaproteobacteria RepID=A0KQ29_AERHH Length = 230 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 95/187 (50%), Positives = 116/187 (62%), Gaps = 9/187 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + + L+ LK LR + GWSL A TGVSKAMLGQIER ESSPTVATLWKIATG Sbjct: 42 MQEMNQHLAQRLKGLRSELGWSLDVAARETGVSKAMLGQIERGESSPTVATLWKIATGFR 101 Query: 61 VPFSTFISPPQSATPSVY---------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 V FS+FI P + V P + M + LFPY+ + FE F + + G Sbjct: 102 VSFSSFIEPTPAEQGEVLYRTADAIRQQPAGEGMQVAPLFPYEGRFGFELFELTLLPGYQ 161 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 ES PHE GV EHV+VI G +++ V+GEW++L GE VRFAAD H YRN G FH+ Sbjct: 162 RESEPHEPGVTEHVIVISGLMEVLVEGEWRSLTQGEAVRFAADRPHGYRNLGVAPAIFHN 221 Query: 172 LIHYPRS 178 LIHYP S Sbjct: 222 LIHYPVS 228 >UniRef50_B2A1T2 Transcriptional regulator, XRE family n=3 Tax=Clostridia RepID=B2A1T2_NATTJ Length = 192 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 7/178 (3%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + T+K+LRQ + L ++E TG+S +L QIER + ++ +LWKI+ L VP + Sbjct: 13 SEIGETIKKLRQTKDLKLKDVSEETGISTGLLSQIERGQVQASLGSLWKISKALEVPLGS 72 Query: 66 FISPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 F SV + + VI L D E + + SG + E Sbjct: 73 FFEELNREKVSVVRKEDRKQLDIPRSNVIYQLLSPDMNRKIEMLLVTLKSGEVEEHEKVT 132 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E +VI G+L + V E TL G+ F + + H + N G++ + P Sbjct: 133 HEGEECGLVIKGKLGITVGDETITLEEGDSAYFDSTIPHRFFNPGDEESISVWAMTPP 190 >UniRef50_Q9K8U3 BH2909 protein n=2 Tax=Bacillus RepID=Q9K8U3_BACHD Length = 189 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 70/181 (38%), Positives = 99/181 (54%), Gaps = 7/181 (3%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L++ + LK++R RG +L +LA+ TGVSK MLGQIER ES+PTV+TLWKIATGL+V Sbjct: 4 EMLSKRIGQRLKRIRSDRGMTLDQLAKKTGVSKPMLGQIERGESNPTVSTLWKIATGLHV 63 Query: 62 PFSTFISPPQSATPSVYDP------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 F+ FI + + + LFP FE FS+++ +G S Sbjct: 64 SFTAFIEDEKPNVTVIKRDQVLPIIDGCDFQVFPLFPRSKDKPFEIFSVKLEAGTDHTSE 123 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRN-GGEQTVHFHSLIH 174 H +GV E V+V G L++ + E L G+G+ F AD H Y N + F ++I Sbjct: 124 GHAQGVHEFVIVEKGTLNVKIGDEVYVLERGDGIHFPADQVHHYINGSSSEACVFTNIIS 183 Query: 175 Y 175 Y Sbjct: 184 Y 184 >UniRef50_Q2RGY9 Transcriptional regulator, MerR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGY9_MOOTA Length = 178 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 6/177 (3%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++QLR++RG SL +AE TG++ + L Q+ER+ + P++ +L KIA L++P F Sbjct: 1 MLGKKIRQLRRERGMSLKDVAEKTGLTSSFLSQVERDLADPSITSLRKIAEALDIPIFYF 60 Query: 67 ISPPQSATPSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + P+ +P V Q+ Q+ + L D E ++ GA S P Sbjct: 61 LLNPEDHSPVVRKDQRKVLRFPQSHLTYELLSPDLNRNMEVMMARLEPGAASCDEPLAHP 120 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 E +VV+ G +++ + GE + G+ + + A + H + GE+ + F S I P+ Sbjct: 121 GEECIVVLQGVMEIDIGGEVFRVETGDSIYYYASIPHKLWSVGEEELVFISAITPPQ 177 >UniRef50_A0RE37 DNA-binding protein n=81 Tax=Firmicutes RepID=A0RE37_BACAH Length = 204 Score = 187 bits (476), Expect = 1e-46, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 7/185 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + L+ LK +R++ SL ++++ TGVSK M+GQIER ESSPT+ T+WKIA GL Sbjct: 20 MEEIQLILAKNLKTIREKEKLSLEKVSQLTGVSKTMIGQIERGESSPTLTTIWKIANGLK 79 Query: 61 VPFSTFISPPQSATPSVYDPQQQ-------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F++ I+ PQ T + Q + FP+ FE +++++ + Sbjct: 80 VSFTSLINNPQPDTKVILRNDIQVLSEDSGRYKVYPSFPFQDDRNFEIYTVEIEAEGKLS 139 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H++G E + V +G+L + ++ LN G+ +RF AD H Y N G I Sbjct: 140 SEGHKEGTEEFITVFEGELTIEINDCQYKLNSGDAIRFKADRPHTYHNFGRTLTRLSMTI 199 Query: 174 HYPRS 178 +Y S Sbjct: 200 YYSAS 204 >UniRef50_A3DDF7 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Clostridiales RepID=A3DDF7_CLOTH Length = 179 Score = 186 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 64/177 (36%), Gaps = 8/177 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + ++QLR + LA+ +SK + QIE + +SP++ TL I L TF Sbjct: 2 QIGAKIRQLRIANQMTQEELADRAELSKGFISQIENDLTSPSINTLVDILQCLGTDLKTF 61 Query: 67 ISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 S + + + I + P + E + + G S H Sbjct: 62 FSDSEDKQIVFREKDYFSKTDNELKNTIEWVVPNSQKNAMEPIRMTLQPGGRSLED-HPH 120 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V+ G +++ + E +N GE F + H N GE + P Sbjct: 121 EGEEFGYVVKGSIEVHIGNECYRVNEGESFYFESTRKHYIVNVGESDAQVIWVSTPP 177 >UniRef50_Q4KD74 DNA-binding protein n=10 Tax=Pseudomonas RepID=Q4KD74_PSEF5 Length = 208 Score = 184 bits (469), Expect = 9e-46, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 11/181 (6%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 +FL T ++ LR++RG +LS LA+ + ++ + Q+ERN + P++ L+ IA L V Sbjct: 27 QFLGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQW 86 Query: 66 FISP-----PQSATPSVYDPQQ-----QAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 F + P+ V Q+ + +I L P E + G Sbjct: 87 FFASETQTAPEDQGYVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPG-TYSKE 145 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + E V+ G +L V + L+ G+ F++ H Y N GE+ +I Sbjct: 146 SYSHEGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITP 205 Query: 176 P 176 P Sbjct: 206 P 206 >UniRef50_C1SMM2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMM2_9BACT Length = 182 Score = 184 bits (469), Expect = 9e-46, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 9/179 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 T+K+LR + +L LA+ +G S + L Q+ER+ SPTVA+L KIA L V ++F Sbjct: 2 EFGKTVKELRLKHNMTLRDLAKTSGCSISFLSQLERDLISPTVASLRKIADALGVTITSF 61 Query: 67 ISPPQSATPSVYDPQQQAM---------VITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 S S T S+ + + + V SL + E + GA S + Sbjct: 62 FSGDDSETDSIVVRKDKRVRLGSKASKVVYESLKHREANSVLEPLYHILDKGAYSGDDYN 121 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+ GQ+++ +DG TLN G+ + ++V H ++N + + P Sbjct: 122 IHLGEEFVYVMKGQVEITLDGRPMTLNEGDSALYNSNVPHRWKNTFDGETILLWVNTPP 180 >UniRef50_Q4A0R4 Putative transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q4A0R4_STAS1 Length = 181 Score = 184 bits (469), Expect = 9e-46, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N+ ++ + R++ SL ++A ATGVSK ML QIE+ +S+PT+ TLWKIA GL+ Sbjct: 1 MYNIQSIVAKNIADYRKKHQLSLDKVANATGVSKNMLSQIEKGQSNPTITTLWKIANGLH 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-----QQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + S S + + + + I FPYD FE F +++ G S Sbjct: 61 ISLSQLTSTSNDTIDFIDESDIIPLIDKEVSIYPYFPYDENKKFEMFKMEIQPGGKMHSD 120 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 PH G E+++V DG L++ VDG+ T+N + RF +D+ H Y N G V S ++Y Sbjct: 121 PHHPGSEEYIIVNDGVLEIEVDGKQYTINHHQAFRFNSDLPHSYFNPGTSIVALTSTMYY 180 >UniRef50_C6PYK9 Transcriptional regulator, XRE family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYK9_9CLOT Length = 181 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 8/179 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ ++ LR+++ +L L+ TG+S + L Q+E N SS + +L KI+ L V Sbjct: 1 MINEIAQKIRDLRKEKNLTLKDLSNETGLSISFLSQVENNSSSLAITSLKKISDALGVNI 60 Query: 64 STFISPPQSATPSVYDPQQQAMVIT-------SLFPYDPQLCFEHFSIQMASGAISESTP 116 + F P+ V ++ I L P E + I S Sbjct: 61 NYFFEIPEVNNFLVKSEDEKPFKIEGSNSEFIRLSGEFPNRKLEAMITTIPPEQIHGSNF 120 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E V V++G L + +D + G+ + + + H + N +Q+V +++ Sbjct: 121 -SHPGEEFVYVLEGTLTVVIDENEYYVKAGDSIHYPSTSNHGWINPSKQSVKILTVLTP 178 >UniRef50_C1SJP6 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJP6_9BACT Length = 178 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 78/173 (45%), Gaps = 5/173 (2%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS 68 L+++R++ +L +++ TG +K+ + QIE ++SP++A+L KI L S Sbjct: 4 GIKLREIRKKLSMTLEDISQKTGFTKSFISQIENGKNSPSIASLKKICYALGTTISELFE 63 Query: 69 PPQS-----ATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIE 123 ++ ++P + +++ ++ L E I++ + + + E Sbjct: 64 DERNIVNIFSSPDFKVFKNKSISMSFLASKLVNRKMEPILIELDPYGETGTDYYHHTGEE 123 Query: 124 HVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V++G + + + + L GE + F++++ H RN ++ + P Sbjct: 124 LGYVVEGDICVVIGNDEHYLTQGECIYFSSNLPHKIRNRTDKPAVAFWVGTPP 176 >UniRef50_C7IC10 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C7IC10_9CLOT Length = 184 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+NL+ +S LK++R+++ SL +A+ +GVSK+MLGQIER E +PTV+T+WKIA GL Sbjct: 1 MDNLSNIISENLKRVREEKKLSLDTVAKLSGVSKSMLGQIERCEVNPTVSTMWKIANGLK 60 Query: 61 VPFSTFISPPQSATPSV-------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V FS ++ ++ V + + I F +D FE +S++ + Sbjct: 61 VSFSQLVNHTETNVEIVDIKNLKPLLEDEGRVRIYPTFSFDSTRRFEIYSLEFQTNGYLS 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH +GV E + V G+L + V + ++ G+ +RF AD H Y+N G +I Sbjct: 121 TEPHLQGVQEFLTVYSGELTVTVGEKSFVVHEGKAIRFKADEPHSYKNTGGANCLLDMVI 180 Query: 174 HYP 176 YP Sbjct: 181 FYP 183 >UniRef50_A0QRK7 DNA-binding protein n=2 Tax=Corynebacterineae RepID=A0QRK7_MYCS2 Length = 201 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 11/186 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + L + ++ LR++R + RLAE GVS ++ QIER +P+ ATL ++A GL + Sbjct: 14 DAMLGDLGSRIRMLRKERQLTTERLAETAGVSAGLISQIERGNGNPSFATLVQLAHGLQM 73 Query: 62 PFSTFISPPQSATPSVYDPQQQAMV----------ITSLFPYDPQLCFEHFSIQMASGAI 111 P + P+S + V +++ + L D E + G Sbjct: 74 PIGQLLEAPESKSVVVRKNERRRLDGHGLANDDGGSYELLTPDLNGALEATWVVTPPGYD 133 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE-QTVHFH 170 + +TP+ E +V+ G D+ +DG L+ G+ +R+A+++ H Y N E + Sbjct: 134 TSATPYHHHGEEFGIVLSGTKDVYLDGIRHRLHAGDSIRYASNIPHWYVNPSETEECTAI 193 Query: 171 SLIHYP 176 + P Sbjct: 194 WVSTPP 199 >UniRef50_A3WK19 Putative DNA-binding protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WK19_9GAMM Length = 174 Score = 182 bits (464), Expect = 3e-45, Method: Composition-based stats. Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 2/175 (1%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N ++ LK+LR+ +GWSL+ AE TGVSKAMLGQIER ESSPT+ATLWK+ATG N Sbjct: 1 MQNNHHTVARRLKKLRKDKGWSLTACAEHTGVSKAMLGQIERQESSPTLATLWKLATGFN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 V S ++ P +D + + + L +DPQ E + + MA GA S S H +G Sbjct: 61 VSLSWLLNDE--QQPMTFDFAHERIQVERLLAFDPQTQQEVYKLCMAEGAQSHSDAHRRG 118 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + V G+LD+ V T+ GE RF A H Y N F ++I+Y Sbjct: 119 TFEMLYVQSGRLDIVVGETQVTIKAGEAYRFDAAQPHSYINRYSGKTEFLAVINY 173 >UniRef50_C5EUL8 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUL8_9FIRM Length = 186 Score = 182 bits (462), Expect = 5e-45, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 8/185 (4%) Query: 1 ME-NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGL 59 M+ N+ + +++LR+ + +L A ATGVS++ML QIE+ + +PT++ LWKIA G Sbjct: 1 MDININLEVGRNIRRLREAKKLTLDGAAAATGVSRSMLAQIEKGDVNPTISVLWKIANGY 60 Query: 60 NVPFSTFISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 V F++ + + + +F +D + FE + I + G Sbjct: 61 KVSFTSLVETGMEDAAVIRAGDITPIMEDGGNYMNYPVFAFDDRKLFETYRIVIKPGGCL 120 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ++ PH G E++ + GQ + G+ L G+ +RF AD H YRN G + Sbjct: 121 KARPHLAGTEEYITLFCGQAVIEAAGQEWELAEGDSIRFKADTAHGYRNPGTGNAEMSMV 180 Query: 173 IHYPR 177 I Y R Sbjct: 181 IFYGR 185 >UniRef50_A5IJD1 Cupin 2, conserved barrel domain protein n=9 Tax=Thermotogaceae RepID=A5IJD1_THEP1 Length = 188 Score = 181 bits (460), Expect = 9e-45, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 8/174 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L++LR +G + LAE T +S++ + Q+E +++SP++ TL +I L F Sbjct: 14 RIGEKLRKLRLSKGLTQEELAERTDLSRSFISQLESDKTSPSIDTLERILEALGTDLKHF 73 Query: 67 ISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISESTPHEK 119 S + ++ + L + + + GA +E + Sbjct: 74 FSDVEEERVVFKKEERVPVYDEPEGVKSEILMSGVEDKEIDPILVTLEPGAQTEEESY-H 132 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E VI G++DL +D + L G+ + AD H +N G++ ++ Sbjct: 133 EGSEFGFVIQGRIDLYLDDKRYRLKEGDCFYYKADKKHYVKNSGKKKAVLLWIM 186 >UniRef50_Q186J9 Putative transcriptional regulator n=7 Tax=Clostridium difficile RepID=Q186J9_CLOD6 Length = 187 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 9/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + + ++ LR+ + S+S LA+ + +S ++ QIERN P++ +WKI+ L+ Sbjct: 1 MYLMNIDVGSKIRSLRKSKNISISTLAKNSDLSTGLISQIERNMVVPSIVAMWKISKALD 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAM---------VITSLFPYDPQLCFEHFSIQMASGAI 111 + F + + L P E + + Sbjct: 61 INIGYFFEEIGREDSDIVVKKNNRKKIVTNDSTKFYELLVPNLSGKKIEFILVTLDGHTH 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S E +I G++ + + + L G+ F + + H+Y N ++ Sbjct: 121 KNSEFVTHEGEECGYIIKGKMKITLGNKEYLLEEGDSFYFNSTIPHVYENYDDEVCISVW 180 Query: 172 LIHYP 176 + P Sbjct: 181 AMTPP 185 >UniRef50_B8D0X7 Transcriptional regulator, XRE family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0X7_HALOH Length = 182 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L++LR +G+SL L E GVSK+MLGQIER +++PTV TLWK+A LN Sbjct: 1 MNEINANIGKKLRKLRIGKGYSLGDLEEIAGVSKSMLGQIERGKTNPTVKTLWKVARSLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VPFS FI S ++ + L P + FE + +++ G + Sbjct: 61 VPFSFFIEEETSPVKVFSPSKEVLVSGKKGRYRVYPLMPLNRTKNFEIYLMEIEPGYSYK 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH +GV E V+V +G L L V+ + E + F D HIY N E + + L+ Sbjct: 121 SEPHSQGVEEFVMVKEGILRLTVNSKEYKAREEEIIHFPGDRVHIYHNISETPLKAYVLV 180 Query: 174 HY 175 Y Sbjct: 181 CY 182 >UniRef50_Q3AEA2 Transcriptional regulator, MerR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEA2_CARHZ Length = 274 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 11/179 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + LK LR+++G +L +++ TGVS + L +IE + + ++ATL K+AT F Sbjct: 96 AVGQKLKALREKKGLTLEEVSQGTGVSVSYLSRIESGQVNVSIATLQKLATFYEKNLLYF 155 Query: 67 ISPPQSATPSVYDP--------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 + + ++ + + L + + E +A GA Sbjct: 156 FEGMDTKEQKLVRAGLGQVLETDEEGIKVELLTALN-EPAMEPLLYTVAPGAGRNEN-IS 213 Query: 119 KGVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+ G L++ +D E + G+ + F + H +RN G++ + + P Sbjct: 214 HEGEEFVYVLKGVLEVWLDETERYVVGPGDSLYFKSTQQHRWRNIGDEELVALWINTPP 272 >UniRef50_A3SMM9 Probable transcriptional regulator n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMM9_9RHOB Length = 219 Score = 179 bits (454), Expect = 5e-44, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 23/198 (11%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + L ++ LR+ R +L LAEATG+S + QIER ++ P+V L++I+ L Sbjct: 21 MSRVDPGLGEEIRNLRKARRLTLGALAEATGLSTGFISQIERAQNRPSVTALFRISRALG 80 Query: 61 VPFSTFISPPQ-----------------SATPSVYDPQQQAMVI-----TSLFPYDPQLC 98 V S F P+ + V +++A+ L Sbjct: 81 VSVSWFFPGPEVPDSGAPDPDSPDQNTADRSIIVRRAERRAIAYDDGIRDELLTPGLGGK 140 Query: 99 FEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHI 158 E S + A G+ ++ + E +V+ G L+L V L G+ F + H Sbjct: 141 LELLSCRFAPGSGVDTV-YAHEGEEAGLVLSGVLELWVGEAHHRLEAGDSFAFDSATPHR 199 Query: 159 YRNGGEQTVHFHSLIHYP 176 YRN E + P Sbjct: 200 YRNPSETETIVIWALTPP 217 >UniRef50_C5ESK2 DNA-binding protein n=2 Tax=Clostridiales RepID=C5ESK2_9FIRM Length = 183 Score = 179 bits (454), Expect = 5e-44, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME++ L ++ R + G SL LA+ +G++ +ML QIER+ +P++ TL IA L+ Sbjct: 1 MEDIN--LGKKVQDFRNKSGMSLRELAKRSGLTASMLSQIERDLVNPSIGTLKAIAQALD 58 Query: 61 VPFSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VP F + + + A + +L D + E + + G S Sbjct: 59 VPMFKFFKDDEPQVQMIVRRGENKTIGHPDADLAYTLLTPDVRGSIEFCMMSIPPGLTSG 118 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 P E E V+ G +++ V G L G+ +R H + N G V I Sbjct: 119 RNPQEHVGEEVAYVVRGSVEINVAGVSYQLEEGDSIRIPPQTAHQWMNQGGTVVQVIFAI 178 Query: 174 HYP 176 P Sbjct: 179 TPP 181 >UniRef50_B3QIN2 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=B3QIN2_RHOPT Length = 207 Score = 178 bits (452), Expect = 8e-44, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 97/182 (53%), Gaps = 9/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L++LR ++G+SL RLA+ +GVS+AMLGQIE +S PT+ TLWK+AT L VP Sbjct: 21 DLPSIVGHNLRRLRVRQGYSLERLAKQSGVSRAMLGQIETGKSVPTIGTLWKVATALGVP 80 Query: 63 FSTFISPPQSATPSVYDP--------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F+ I+ P V Q +LFP+D + E + +++A ++ Sbjct: 81 FARLIATETPHHPQVLRRTDAKLLTSNQGQFTSRALFPFDGERQVEFYELRLAPLHREDA 140 Query: 115 TPHEKGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 PH G E++VV G +++ L+ G+ + F ADV H YRN G + ++ Sbjct: 141 DPHAAGTRENLVVAKGAVEITAGAERPVVLSAGDAILFDADVPHSYRNLGAEEAVLFLVM 200 Query: 174 HY 175 Y Sbjct: 201 TY 202 >UniRef50_B8KY58 Transcriptional regulator, XRE family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KY58_9GAMM Length = 219 Score = 177 bits (451), Expect = 9e-44, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 11/183 (6%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 R L ++ LR+ RG +LS L++ + +S+ L Q+ER S P++ L I+ L V S Sbjct: 35 DRSLGLDIRDLRKARGMTLSELSKISELSQGYLSQVERGISVPSIKALHSISRALGVTIS 94 Query: 65 TFI-----SPPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISE 113 F + V + ++ L + E G S Sbjct: 95 WFFQNQVTGEDPAMRAWVVRSGNRRKLTFNTGIVDELLSPNLSRQIEMLKCTFPPGTSSG 154 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 P+ E +++ G+L+L ++ L G+ FA+ +H Y N + I Sbjct: 155 DVPYTHQGEEAGIILSGKLNLWIEDTHIVLEEGDSFAFASSKSHRYANLEDVETVVIWTI 214 Query: 174 HYP 176 P Sbjct: 215 TPP 217 >UniRef50_Q39Q24 Transcriptional regulator, XRE family n=5 Tax=Desulfuromonadales RepID=Q39Q24_GEOMG Length = 198 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 14/182 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L +++LRQ++ +L L+E +G+SK +L QIE ++ +P +ATL KI+ GL V F Sbjct: 14 RLGEKVRKLRQEQRLTLQELSELSGLSKPLLSQIENDQVTPPIATLLKISKGLKVGIHYF 73 Query: 67 ISPPQSATPSVYDPQQQ--------------AMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + V Q V SL P E F ++ Sbjct: 74 FEEEEDQQKLVLTRASQQTATRRRTGNDAPHGYVYRSLAPGIRHKPMEPFLVEFELTEWD 133 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 ++ + E + +++G+L+ + LN G+ + + + H Y + GEQ ++ Sbjct: 134 DAFFYRHDGFEFIYLLEGELEFHYGTDIMRLNPGDSIYYDSSEPHGYVSVGEQKATAVAV 193 Query: 173 IH 174 ++ Sbjct: 194 LY 195 >UniRef50_Q3A2S3 Transcriptional regulator, XRE family n=8 Tax=Desulfuromonadales RepID=Q3A2S3_PELCD Length = 188 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 63/181 (34%), Gaps = 8/181 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + LK+LR + L ++K + Q+E + + P++ATL I V Sbjct: 2 ERNLNIGEKLKRLRMINSLTQEELGNRADLTKGYISQLENDTACPSIATLKDILDVFGVS 61 Query: 63 FSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 F + P + + + L P + + + GA E Sbjct: 62 MQEFFTDPVDTEVVFGTDARVQPTNDGDDIKVELLVPGAQNREMDPALVTLEPGAEMEEQ 121 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E V+ G++ + +D + T+ E F +D H RN G+ ++ Sbjct: 122 DF-HEGEEFGYVLLGRIQVQLDDKVYTVKKNECFFFTSDRRHSVRNIGKGPARILWVVTP 180 Query: 176 P 176 P Sbjct: 181 P 181 >UniRef50_D2BA96 Putative transcriptional regulator, XRE family n=4 Tax=Actinomycetales RepID=D2BA96_STRRD Length = 192 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 11/188 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M +LA L +++LR RG +L ++A A VS +ML +ER + +PTV L +IA GL Sbjct: 1 MVDLA-ALGLRVQELRHLRGLTLQQMAGAADVSVSMLSSVERGQKAPTVVVLGRIADGLG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISE 113 V + ++ P+ V Q V L P P + FE + G + Sbjct: 60 VSLAELVAEPEDRRVIVRRAADQDTVDEPGGWHRSILTPVVPGVNFEWIRTTLPPGCDAG 119 Query: 114 -STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS- 171 + +G E+VVV G L L V + L G+ FAAD H Y N G ++ Sbjct: 120 RFPAYAQGSHEYVVVESGTLRLTVADQTVELGEGDSAYFAADAEHGYVNPGPVPCAYYVA 179 Query: 172 -LIHYPRS 178 LI PRS Sbjct: 180 ALIMRPRS 187 >UniRef50_B0SF19 Transcriptional regulator n=6 Tax=Leptospira RepID=B0SF19_LEPBA Length = 207 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 8/182 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + LK +R +G+SL +LA GVS+AML QIE+ +S PT++ LWKIA GLNV Sbjct: 21 DYITDVVKENLKLIRHTKGFSLDKLANRCGVSRAMLSQIEQGKSVPTISVLWKIANGLNV 80 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAISE 113 PFS + + + ++ +LFP+ E + + + G Sbjct: 81 PFSELLKEKNQDGIHILKAENSKVLYSNSKVFASRALFPFLGNRKTEFYELILKPGGHEV 140 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH+ G E++VV+ G+L L V + L + V F ADV+H Y N +Q + ++ Sbjct: 141 AEPHKTGTTENLVVVSGKLRLRVGEKVVELEPKDSVFFKADVSHEYSNPTDQETLMYLVM 200 Query: 174 HY 175 Y Sbjct: 201 DY 202 >UniRef50_Q2RR34 Transcriptional Regulator, XRE family with Cupin sensor domain n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RR34_RHORT Length = 248 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 8/182 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+L + L++LR RG SL RLA+ +GVS+AMLGQIE S+PT+ LWKIA L+V Sbjct: 62 EDLMPVVGENLRRLRTGRGLSLDRLAKLSGVSRAMLGQIELGRSAPTITVLWKIARALDV 121 Query: 62 PFSTFISPPQSATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 PFS F++ P + V + +LFP+D E + + ++ +I++ Sbjct: 122 PFSAFVAAPALSKAVVLRRSEASWLTSTDGRFSSRALFPFDAPRRVEFYEVVLSGHSIAQ 181 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH G +E + V G L++ L+ G+ ++F AD+ H YRN G F+ ++ Sbjct: 182 SHPHPAGTVETLTVARGVLEVDSGPRIHRLDPGDALQFEADIDHAYRNPGGDDTVFYLVM 241 Query: 174 HY 175 Y Sbjct: 242 TY 243 >UniRef50_Q1YMV2 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YMV2_MOBAS Length = 193 Score = 176 bits (447), Expect = 3e-43, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 13/187 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++ + + L+ +R SL +LA G S++ML ++E +PT+ L K+ L + Sbjct: 6 NSVPQDVGRKLRHMRNLHNLSLKQLAATVGCSESMLSKVETGRVNPTLTMLRKLVDALGI 65 Query: 62 PFSTFISPPQSATPSVYDPQQQ------------AMVITSLFPYDPQLCFEHFSIQMASG 109 + P V+ ++ +++ L P PQ E + G Sbjct: 66 NIAFLFEPQDEDAAIVHRAGERQVIGVGQSRRGAGIMLERLPPAAPQNVLEANIHIVNPG 125 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 ++ E V++G L V+G L G+ F ++ H YRN G++ Sbjct: 126 GSTDG-AFSHVGEEIGFVLEGTFTLTVEGVTHVLAPGDSFAFRSERPHEYRNDGDKVARV 184 Query: 170 HSLIHYP 176 + P Sbjct: 185 LWVNTPP 191 >UniRef50_UPI0001B57A23 transcriptional regulator, XRE family protein n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57A23 Length = 178 Score = 175 bits (445), Expect = 5e-43, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 6/172 (3%) Query: 11 TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP 70 +++ R RG ++ +LA+ GVS ++ Q+ER + P++ T+ +IA L++P + P Sbjct: 5 RIREFRTLRGLTVRQLADQAGVSTGLISQVERGVTDPSLETMRRIAEVLDIPLFSLFQEP 64 Query: 71 QSATPSVYDPQQQAMVITSLFPYD------PQLCFEHFSIQMASGAISESTPHEKGVIEH 124 T +V + + + E + G +S E Sbjct: 65 DEETVAVIRHDDRYRISSPHHAITYTRASPGGAKLEVLEGVLEPGGVSSDELRSHPSEEC 124 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 VVVI G+L + V + L G+ F + V H +RN G T F + P Sbjct: 125 VVVIAGRLTVQVGEQTHVLKTGDSCHFDSTVPHRFRNDGRTTARFLVSVTPP 176 >UniRef50_Q1IRF9 Transcriptional regulator, MerR family n=2 Tax=Bacteria RepID=Q1IRF9_ACIBL Length = 292 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 8/176 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L+ +R RG SL+++AEA G+S L IER+ S +VATL K+A + Sbjct: 117 NVGLRLRLVRTSRGLSLAQVAEAVGISVGFLSAIERSAMSASVATLRKLAKFYKLNILDL 176 Query: 67 ISPPQSATPSVYDPQQQ------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 V +++ + + L +P E +A GA S + Sbjct: 177 FDQSGGRQYLVRPAERRQLDASDGVRMELLAWGNP--VMEPHLFHVAPGAGSGDEEYSHE 234 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E + V+ G L+L VDG+ L G+ F + H + N G + + P Sbjct: 235 GEEFLFVLTGLLNLVVDGKEYRLQKGDSFYFESSTPHRWSNTGSKEAVVLWVNTPP 290 >UniRef50_Q89FI5 Blr6715 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89FI5_BRAJA Length = 210 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 9/182 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + L T++ LRQ+ G S+ +A TG+S M+ Q+ER + P++ TL ++ L+V Sbjct: 20 DAVDQRLGETVRLLRQRAGLSIQDVANKTGLSNGMISQLERARAMPSIRTLRLLSIALDV 79 Query: 62 PFSTFIS--PPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAIS 112 P S F P + + + V+ D + E + + + GA S Sbjct: 80 PISYFFETTDPGDVQRYIVRKNSRRLLRLTASGVVKEALTPDGKGQLELYELTLNPGASS 139 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + + + ++ G L L +D + L G+ RF + V H++ N +Q + Sbjct: 140 GTDFLQHTGEKAGYILSGSLRLWLDNQAHVLEAGDSFRFPSIVPHMFDNPTQQAARVIWV 199 Query: 173 IH 174 Sbjct: 200 TT 201 >UniRef50_A9A888 Transcriptional regulator, XRE family n=8 Tax=Methanococcus RepID=A9A888_METM6 Length = 209 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 7/184 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 MEN + +S LK++R + G SL +++ TGVSK MLGQIER E +PT++T+ KIA GL Sbjct: 26 MENPSHVISKNLKKIRNENGLSLDAVSKLTGVSKGMLGQIEREEVNPTISTILKIANGLK 85 Query: 61 VPFSTFISPPQSATPSV-------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F++ +S ++ +V + +F ++ FE ++ G + Sbjct: 86 ISFTSLLSEKEADVKTVELNNVSPIYDDSKKWRFYPVFNFEDSRPFEISYVEADPGVVMS 145 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H K E V V +G+L L ++ + T++ G +RF A+V H Y N + H ++ Sbjct: 146 SDGHIKNSEETVTVYEGELTLSIEDKTYTISKGNSIRFKAEVPHKYENRSSKMTVIHMML 205 Query: 174 HYPR 177 +YP+ Sbjct: 206 YYPK 209 >UniRef50_A9D7J9 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7J9_9RHIZ Length = 205 Score = 175 bits (444), Expect = 7e-43, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 13/187 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++ + L+ +R G L +A A S++ML ++E SP++ L +I LNV Sbjct: 18 DHNDVLIGARLRHMRIASGLKLKDVAAAADCSESMLSKVETGHVSPSINMLHRITKVLNV 77 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFE---HFSIQ---------MASG 109 S +P + + + ++++ S + P L E + I +A G Sbjct: 78 NISGLFAPVEETSRFIQRQGTRSVLSESYMRHGPGLALERLTPYEIHGHLQGQLHVIAPG 137 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 A S+ + E V++G L+L V + L G+ F + H YRN G+ Sbjct: 138 AASDG-AIQHEGEEVGYVVEGSLELTVGDQTVLLGAGDSFFFDSSRPHSYRNPGKVVARV 196 Query: 170 HSLIHYP 176 + P Sbjct: 197 VWVNSPP 203 >UniRef50_A8F3B6 Transcriptional regulator, XRE family n=1 Tax=Thermotoga lettingae TMO RepID=A8F3B6_THELT Length = 185 Score = 174 bits (443), Expect = 8e-43, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 82/183 (44%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + ++ LRQ + ++ LA+ +GV+ ++ QIE + SP+++TL I + L Sbjct: 1 MNSELDNIGEKIRSLRQSKKLTVRELAKLSGVTPGLISQIEHGKVSPSLSTLKAILSALG 60 Query: 61 VPFSTFISPPQSATPS---VYDPQQQAMVITSLFPYD----PQLCFEHFSIQMASGAISE 113 + + V +++ ++++ Y+ + F + GA S Sbjct: 61 ETIISLVEQDVGDQIIKGIVRKEERRKVIVSPGLTYELLSSKNNAYSMFISYLEPGADSR 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + + IE +VI G++++ V + L G+ + + + + H ++N G T ++ Sbjct: 121 ESFYAHEGIESGIVIQGEVEITVGDKSIVLREGDSITYPSTIPHRWKNVGNVTAVGVWVV 180 Query: 174 HYP 176 P Sbjct: 181 SPP 183 >UniRef50_UPI00019046BF hypothetical protein RetlI_11854 n=1 Tax=Rhizobium etli IE4771 RepID=UPI00019046BF Length = 280 Score = 174 bits (443), Expect = 9e-43, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 14/182 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +K LR ++ L +LA TG+S AML +IER + PT+ TL +IA V F Sbjct: 100 AIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHF 159 Query: 67 I-SPPQSATPSVYDPQQQ------------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + + +V +Q+ A SL E F + + Sbjct: 160 FKADKEEPLIAVVRKEQRLKLPSPPGEKRPAFFFESLDYPAADRRMEAFYAEFPIDS-PP 218 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH+ G E + V+ G+L + VDG+ L+ G+ + F + V H YR GE+ +I Sbjct: 219 SEPHQHGSAEFIYVLSGRLVVNVDGKETALDAGDAIYFDSSVPHSYRREGEEISSALVVI 278 Query: 174 HY 175 Sbjct: 279 SP 280 >UniRef50_C6E5F4 Transcriptional regulator, XRE family n=5 Tax=Geobacter RepID=C6E5F4_GEOSM Length = 199 Score = 174 bits (443), Expect = 9e-43, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 16/184 (8%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++ LRQ++ +L LA+ TG+SK +L QIE ++ +P +ATL KIA GL V F Sbjct: 14 LGEKVRGLRQEQRLTLQALADMTGLSKPLLSQIENDQVTPPIATLLKIAKGLKVGIHYFF 73 Query: 68 SPPQSATPSVYDPQQQ----------------AMVITSLFPYDPQLCFEHFSIQMASGAI 111 + +Q + L P Q E F I+ A Sbjct: 74 EEAGDRKKFMLTRGEQSPLGSQRRPGKENIQHGYMYKPLAPGMRQKKVEPFLIEFEQRAW 133 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + +E V ++DG+L+ E L G+ + + + H Y + GE + Sbjct: 134 DNSLFYSHEGVEFVYLLDGELEFHYADEVMKLYAGDSIYYESSEPHGYVSVGEVRARAVA 193 Query: 172 LIHY 175 +++ Sbjct: 194 VLYT 197 >UniRef50_B0MBC4 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B0MBC4_9FIRM Length = 180 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 7/180 (3%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ +K+LR+++ S+ L++ +GVSK+ML QIER + +PT++TLWKI+ G+ VPF Sbjct: 1 MNLIVAKNIKRLREKQKLSMEALSKLSGVSKSMLAQIERGDGNPTISTLWKISNGMKVPF 60 Query: 64 STFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 P++ + + LFP D F + +++ + ES Sbjct: 61 DALTVRPKTPYEIIKTADIEPLLEDSGRVKNYPLFPDDADRKFAVYYLKLEPYSRWESEA 120 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 H KG E + V G L++C D TL E +RF D H YRN G TV + ++ YP Sbjct: 121 HLKGTTEFITVFHGDLEICADCHKFTLTKDESIRFPGDTAHSYRNTGNDTVVLYMILFYP 180 >UniRef50_A7G0N7 DNA-binding protein n=13 Tax=Firmicutes RepID=A7G0N7_CLOBH Length = 181 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 8/179 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ ++ LR+++ +L L+E TG+S + L Q+E N SS + +L KIA LNVP Sbjct: 1 MINEIAEKIRNLRKEKNLTLKDLSEKTGLSISFLSQVENNSSSLAITSLKKIADALNVPI 60 Query: 64 STFISPPQSATPSVYDPQQQAMVIT-------SLFPYDPQLCFEHFSIQMASGAISESTP 116 + F P+ V +++ + L + E + + + Sbjct: 61 TYFFKSPELHKFLVKKQEREVFELEGSSSKFIRLSGNFTERAMESILVVIPA-EKQHGHK 119 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + V++G + +DGE +N G+ + F + + HI N + +++ Sbjct: 120 FSHPGEEFIYVLEGAIIANIDGEEYFVNEGDSIHFPSTIPHILSNPLKTDSKILTVVCP 178 >UniRef50_A5TRU5 MerR family transcriptional regulator n=14 Tax=Fusobacterium RepID=A5TRU5_FUSNP Length = 184 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 11/181 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + LK+ R +G SL LA +S + L QIE+ ++SP++ L KIA L+V + Sbjct: 2 TIGEKLKKSRNDKGMSLRELATKVELSASFLSQIEQGKASPSIENLKKIAHTLDVRVAYL 61 Query: 67 ISPPQSATPSVYDPQQQAMVITS----------LFPYDPQLCFEHFSIQMASGAISESTP 116 I + ++ +++ + L + + E ++ S Sbjct: 62 IEDEEDDIRNIEHIKKENIRYIESLDSNIKMGILLSNNREKNMEPIIYEIGVDGESGRDF 121 Query: 117 HEKGV-IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + G E + +++G+L++ V + L+ G+ + F + + H ++N ++ V ++ Sbjct: 122 YSHGSSEEFIYILEGELEVYVANKKYKLSKGDSLYFKSSLKHRFKNTSKKEVKALWVVSP 181 Query: 176 P 176 P Sbjct: 182 P 182 >UniRef50_A1RBM5 Putative Helix-turn-helix domain protein n=2 Tax=Actinobacteria (class) RepID=A1RBM5_ARTAT Length = 206 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 12/188 (6%) Query: 1 MEN----LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIA 56 M+ L+ + ++Q RQ RGW+L +LAEA GVS+ M+ +E+ ++P+V TL +I+ Sbjct: 7 MDESTTTLSLAIGARVRQERQNRGWTLDQLAEAAGVSRRMIINMEQGAANPSVGTLLRIS 66 Query: 57 TGLNVPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMAS 108 L V + P+ V + A + TS + + E + + Sbjct: 67 DALGVGLPALVESPRPKPVKVTRSGEGAALWTSEQGGRGVLVAGTESPDVVELWDWTLGP 126 Query: 109 GAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 G S H G E + V+ G L + VDG TL G+ + F DV H Y N G V Sbjct: 127 GDQHGSEAHAAGTKELLQVLHGTLTVDVDGHMNTLEAGDSMTFPGDVAHSYANPGTDPVR 186 Query: 169 FHSLIHYP 176 F + P Sbjct: 187 FSLAVFGP 194 >UniRef50_D2R569 Transcriptional regulator, XRE family n=3 Tax=Bacteria RepID=D2R569_9PLAN Length = 202 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 10/186 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L + + ++ +R+ +GW+L +LA +GVS++ML +IER ++PT+ ++IA + Sbjct: 12 EPLQQLVCDRVRSMRKAKGWTLEQLASLSGVSRSMLSEIERGSANPTLGVAFRIAQAFGM 71 Query: 62 PFSTFISPPQSATPS--VYDPQQQAMV--------ITSLFPYDPQLCFEHFSIQMASGAI 111 + P+ P V ++ + I +L P + E + + + +G Sbjct: 72 TLGDLVDSPEPPKPRIDVIRSDDRSFMFRDDSDCRIRTLSPLHLEKDVEFYELTLRTGGK 131 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 ES PH +G E + V G + L E L G+ + ADV H RN G Sbjct: 132 LESQPHFEGTREFLTVEKGVVRLTAGSETSELKQGDSAHYPADVPHEIRNIGRGEAVVFL 191 Query: 172 LIHYPR 177 + Y R Sbjct: 192 VDIYGR 197 >UniRef50_Q18AY1 Putative transcriptional regulator n=5 Tax=Clostridium RepID=Q18AY1_CLOD6 Length = 183 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N + L+ LRQ+ G SL + ++ TGVSKAMLGQIER ESSPTV+TLWKI++G Sbjct: 1 MDNKFPNVGENLRLLRQEMGISLDKASKMTGVSKAMLGQIERGESSPTVSTLWKISSGFK 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 + F+T ++ + + + + +V + ++P+ PQ FE F I++ Sbjct: 61 INFTTLLNENTNTYEVIKKEEVEPIVEQKGNMKLYPIYPFSPQRRFELFIIELEENCTHV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S+ H + E+V+VI+G+LDL VDG+ L G +RF + HIY+N + FH++ Sbjct: 121 SSTHSHVLEEYVLVIEGKLDLNVDGKTYILESGHSIRFDGTLEHIYKNLNKGKTIFHNIE 180 Query: 174 HY 175 Y Sbjct: 181 VY 182 >UniRef50_A4J4T3 Cupin 2, conserved barrel domain protein n=3 Tax=Firmicutes RepID=A4J4T3_DESRM Length = 180 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 12/182 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + ++ LR Q+ +L L+E TG+S + L Q+ER SS + +L KIA LN Sbjct: 1 MEEIF----EKVRTLRNQKNMTLKDLSEKTGLSVSFLSQVERGTSSLAITSLKKIADALN 56 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVIT-------SLFPYDPQLCFEHFSIQMASGAISE 113 V ++F + + + +Q++ I L E + A G + Sbjct: 57 VHIASFFANYSNTNFTTRADEQKSFKIEGSSTEYIRLSGEFHGRNLEPLLVTFAPGQVQP 116 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 +T E V++G + VDG+ + G+ + F + + H + N +Q ++ Sbjct: 117 NTFC-HPGEEFYYVLEGAVIFNVDGKEILVKEGDTIHFPSTLPHFWINPLQQKTKVLCVL 175 Query: 174 HY 175 Sbjct: 176 TP 177 >UniRef50_Q67K52 Transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67K52_SYMTH Length = 196 Score = 172 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 5/173 (2%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++Q R Q+G +L LAE +G+SK L Q+E +++SP++ L +++ GL VP + Sbjct: 9 SLGHRIRQTRTQKGITLQELAERSGLSKGFLCQLENDKASPSLQALDRLSAGLGVPVALL 68 Query: 67 ISPPQSATPSVYDPQQQAMVITSL-----FPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 + + V +Q + P + +++A GA + H Sbjct: 69 LISQEERAHVVRANARQGYSMNGEGLSVQLLSAPGRSLKMMLLELAPGAATGGDNHVHEG 128 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E +V+ G + E LN G+ + + + H N G+Q + Sbjct: 129 EECHLVLQGTVRYRQGDEELILNEGDSLHWNGYIPHRVENCGDQPARILCVTT 181 >UniRef50_B8G9C1 Transcriptional regulator, XRE family n=3 Tax=Chloroflexus RepID=B8G9C1_CHLAD Length = 211 Score = 172 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 10/181 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LR+++ S+ LAEA+G++ L IE +SP+V+TL ++A L VP S F Sbjct: 22 VGKRLRTLRERQRMSIRALAEASGLAVNTLSLIENGRTSPSVSTLQRLAVALQVPISAFF 81 Query: 68 SPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 +P VY P QA+ + L P E + + GA S Sbjct: 82 TPEVPQQRIVYTPAGQAIASIFPHGTLADLAPGFINRTLEPLLLTLNPGAGSGPEAIIHT 141 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY---PR 177 E V ++GQ+ V + T+N G+ + F A + H + N G ++ PR Sbjct: 142 GQEFVFGVNGQILYTVADQTYTINPGDSLLFEAVLPHRWHNPGSTPAQALLVLCPLELPR 201 Query: 178 S 178 S Sbjct: 202 S 202 >UniRef50_A5N143 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N143_CLOK5 Length = 184 Score = 172 bits (437), Expect = 4e-42, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 100/181 (55%), Gaps = 6/181 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME++ + LK +R++R +L L++ T VS +MLG+IER ++PT+ LWKIA GL Sbjct: 1 MEDIKSIIGINLKNIRKKRQLTLEMLSKLTNVSISMLGEIERGITNPTITVLWKIADGLK 60 Query: 61 VPFSTFISPPQSATPSVYDPQ------QQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 +PF+ I+ + VY+ + + SLF +DP E + + G+ ES Sbjct: 61 IPFTDLINEEKPPISVVYNSDAKTIINESGFKLFSLFNFDPIKKIELYYKILEVGSSYES 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H G+ E++++ +G ++L + + L+ G+ + F ++ H Y+N GE + + L++ Sbjct: 121 KGHTVGIEEYIMICNGIMNLQIGDKNYILSKGDSINFKGNIYHRYKNEGELPLRAYMLLY 180 Query: 175 Y 175 Y Sbjct: 181 Y 181 >UniRef50_B8HGK7 Transcriptional regulator, XRE family n=3 Tax=Arthrobacter RepID=B8HGK7_ARTCA Length = 201 Score = 172 bits (437), Expect = 4e-42, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 11/185 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 L + ++ +R+ RG +L+RL+E TG+S+A++ QIER ++P+ TL ++A GL++ Sbjct: 14 SELLATVGNKVRSMRKDRGMTLARLSEITGLSQAIVSQIERGMANPSFTTLAQLAHGLDI 73 Query: 62 PFSTFISPPQSATPSVYDPQQQAMV-----------ITSLFPYDPQLCFEHFSIQMASGA 110 P F + V + + I L D E I G Sbjct: 74 PVGRFFIGQDQSRSPVVRRSARRNLQNVTRESVGEAIHELLTPDRDGTIEAQWISTPPGH 133 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + +TP E +I G+ D+ +DG +L G+ + +++++ H Y+N E+ Sbjct: 134 DTSATPFTHSGEEFCYIISGRKDVYLDGVCYSLEEGDSITYSSEIPHWYKNSYEEVCVAI 193 Query: 171 SLIHY 175 + Sbjct: 194 WVNAP 198 >UniRef50_Q222R6 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q222R6_RHOFD Length = 197 Score = 171 bits (435), Expect = 7e-42, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 11/176 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L ++Q R+ +G +L+ L++ +G+S +L QIER SSP++ ++ +I T L VP S Sbjct: 16 LGMQVRQRRRIKGLTLTELSQQSGLSVGLLSQIERGLSSPSLKSMTQICTALGVPLSWLF 75 Query: 68 -----SPPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISESTP 116 P V ++ + V L D + + + + G S Sbjct: 76 DNGPLENPAEKGLVVRRGSRRRLDLGTYGVTKELLSPDLGGEMQIYLVSIRPGGQSGPET 135 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + E +V+ G L+L VD L G+ RF + + H + N G + Sbjct: 136 YTHRGEEGGLVLTGTLELTVDDRIVLLYEGDSFRFRSSLAHRFANPGTTQANVVWA 191 >UniRef50_Q1LDV8 Transcriptional regulator, XRE family n=9 Tax=Burkholderiales RepID=Q1LDV8_RALME Length = 203 Score = 171 bits (435), Expect = 7e-42, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 12/182 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + + L+ LRQ + SL L+ GVSK+ML QIERN ++PTVA LW++A L V + F Sbjct: 20 AVGSALQALRQSQQLSLDELSRRAGVSKSMLSQIERNLANPTVAVLWRLANALGVSLTDF 79 Query: 67 IS----PPQSATPSVY--------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 ++ PQ+ +V + L P D FE + + + G + S Sbjct: 80 LAQGTAAPQAPAITVVPPHATPALKSPDTRCELRILGPIDMAGRFEWYELSIQPGGVLAS 139 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PHE G EH+ V+ G + + G+ + L G+ R+ ADV H N G+ ++ Sbjct: 140 EPHEAGTQEHLSVLTGSMTVRSGGDEKKLKHGDTARYGADVAHAIGNPGKSVATALLVVV 199 Query: 175 YP 176 +P Sbjct: 200 HP 201 >UniRef50_B1KW62 Cupin domain protein n=26 Tax=Firmicutes RepID=B1KW62_CLOBM Length = 183 Score = 171 bits (435), Expect = 8e-42, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 7/181 (3%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ ++ LK LR +R SL +LAE + +SK ML QIE+++++PT+ TLWKIA GL VP Sbjct: 2 NINSIIAENLKTLRTERNLSLGQLAELSNISKVMLSQIEKSDTNPTINTLWKIANGLKVP 61 Query: 63 FSTFISPPQSATPSVYDP-------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 ++ + + T + ++ + P FE F I++ G S Sbjct: 62 YTLLLEQKEYDTCIIKKSNLEPQISEEGHYRAYCYYTNTPYRNFELFQIELDEGCSYRSV 121 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H K E+++V++G+L L V+ E LN + + F+ HIY N G T+ Y Sbjct: 122 GHSKKSEEYIMVLEGELTLKVNNETYKLNPNDSISFSPSNQHIYSNNGNGTLKATITNFY 181 Query: 176 P 176 P Sbjct: 182 P 182 >UniRef50_Q5WCS3 Transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCS3_BACSK Length = 193 Score = 171 bits (435), Expect = 8e-42, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 8/180 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + L+QLR +G S+ LA+ GVSK L +IE+ E +PT++ +WKIA GL++ Sbjct: 13 QEAGKQIGKNLRQLRTSKGMSIEALAQQIGVSKLTLLKIEQGEGNPTLSVIWKIANGLHI 72 Query: 62 PFSTFISPP------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 P + +S ++ ++ LF Q E + + ES Sbjct: 73 PITALLSFEADVAIARANKAMKLSSSDDEFIVEPLFR--SQGLMECYRGYLQPQCRYESE 130 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H GV+E V V+ GQL + V+GE L+ + + F D H Y N G++T H LI Y Sbjct: 131 AHRLGVVETVTVMAGQLTIEVEGESHHLSAYDSIHFKGDRPHAYINLGKETAVLHFLISY 190 >UniRef50_Q5LWB9 DNA-binding protein, putative n=2 Tax=Rhodobacteraceae RepID=Q5LWB9_SILPO Length = 193 Score = 171 bits (435), Expect = 9e-42, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 10/180 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + T +++LR+ RG +L +LA ATG+S L Q+ER + P+V L I+T L V + F Sbjct: 12 IIGTRMRELRKARGLTLKQLAAATGLSIGYLSQLERQAADPSVRALNVISTALGVGINWF 71 Query: 67 ISPPQ----SATPSVYDPQQQAMVITS------LFPYDPQLCFEHFSIQMASGAISESTP 116 P V ++ + S L + E GA S + Sbjct: 72 FPDPDTVSDPEADLVVRADRRRTLRFSSGVRDELISPNLSGQLELIVTTFDPGAGSGAEL 131 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + E +++GQL++ V TL G+ V+FA+ + H Y N G + P Sbjct: 132 YAHRGEEAGFIVEGQLEVTVGARLVTLGVGDTVQFASTIPHRYHNPGPGRTVMIWAVTPP 191 >UniRef50_A6CFH7 DNA-binding protein n=6 Tax=Bacteria RepID=A6CFH7_9PLAN Length = 205 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 9/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + ++ LS +++LR++RGWSL L+ A GVS++ML QIER E++PT+A +I+ + Sbjct: 21 DEISGQLSQRVRELRKERGWSLDSLSAACGVSRSMLSQIERGEANPTLAVTVRISQAFGI 80 Query: 62 PFSTFISPPQSATPS-VYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAIS 112 + P S + V + + S L P + E + +Q+ + Sbjct: 81 ALGELVEAPVSTSAIEVIRAEDRTFHYRSDDECRIRTLSPLHLEKDVEFYEVQLHANGKL 140 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 +S PH +G E + V G++ + + L G+ + DV H N G + Sbjct: 141 QSAPHFRGTREFLTVEKGKVQVNSGEDTTQLGPGDSASYRVDVPHAIMNIGRGEAVLFLV 200 Query: 173 IHY 175 + Y Sbjct: 201 VIY 203 >UniRef50_C0X8B7 Transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X8B7_ENTFA Length = 183 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 8/181 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + + LK++RQ++ +L LA TGVSK ML QIE+ ++PT+ T+WKI+ GLNVP Sbjct: 2 EINTIIGNNLKKIRQEKKLTLDELAGITGVSKGMLSQIEKGTTNPTINTIWKISNGLNVP 61 Query: 63 FSTFISPPQSATPSVYDP--------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 ++ + V + + + + + + + FE F ++ SG ++ Sbjct: 62 YTYLLEDDYVKENPVVKKTETVTQHSEDHSYRVFNYYSDNQKRNFELFQFELDSGKKYQA 121 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H K IE+V+VI G L L V + L + F A+ H Y N G + V + + Sbjct: 122 VGHSKRSIEYVMVIQGTLALEVGDQRYLLPKDAAMYFDANQVHTYINEGTEQVQAVVINY 181 Query: 175 Y 175 Y Sbjct: 182 Y 182 >UniRef50_B0UFY6 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UFY6_METS4 Length = 201 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 13/187 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 L ++ LR+ +G +L ++A GVS L QIERN S + L +IAT L V Sbjct: 16 NEQELLLGEQIRALRKIKGLTLQQIAGEIGVSIGYLSQIERNRSKLPIGVLKRIATILGV 75 Query: 62 PFSTFISP----PQSATPSVYDPQQQAMVI-------TSLFPYDPQLCFEHFSIQMASGA 110 S F P P + ++ + L + E +A G Sbjct: 76 QLSWFFQPQTLGPPEEQDFIVRAGRRRRMSFTGTGIAEELLSPNLNGPLEVLLSTIAPG- 134 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 S+S + +E +V+ G LDL + L G+ F++ H N GE Sbjct: 135 -SDSDFYSHDGMEAGLVLAGTLDLWIGDRTFRLEVGDSFSFSSRERHRCANPGEIETKVV 193 Query: 171 SLIHYPR 177 +I P Sbjct: 194 WIITPPH 200 >UniRef50_B9KL60 Transcriptional regulator, XRE family n=3 Tax=Rhodobacter sphaeroides RepID=B9KL60_RHOSK Length = 211 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 11/186 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + L+Q+R+ SLS L+E +GVS L Q+ER P++ T+ +I+ L VP Sbjct: 2 NSNHLIGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRTIERISQALGVP 61 Query: 63 FSTFISPPQSATPS----VYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + P P + Q + + +L + ++ M G+ Sbjct: 62 PFWLLEMPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTLVTPRSFDAMQLMTVVMEPGSK 121 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + + I+ ++ G L+L VDG L+ G+ F + + H + N G Sbjct: 122 SGAGFYRHEGIDVGYILSGSLNLEVDGRTHVLSAGDCFAFDSQLPHRFENRGGSRAEVLW 181 Query: 172 LIHYPR 177 + R Sbjct: 182 INTKSR 187 >UniRef50_A5F6U2 Transcriptional regulator, HTH_3 family n=27 Tax=Vibrio RepID=A5F6U2_VIBC3 Length = 181 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 75/180 (41%), Positives = 101/180 (56%), Gaps = 4/180 (2%) Query: 1 MENL--ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATG 58 M ++ ++ LK LR+ RG SL A+ TGVSKAMLGQIER ESSPT+ATLWKIA+G Sbjct: 1 MTDVMFKSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASG 60 Query: 59 LNVPFSTFIS-PPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 L FS F + PQ + P M I +LFPY E F I + S+PH Sbjct: 61 LEASFSAFFANDPQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPH 120 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 GVIE++ V++G + + D +W L GE +RF +D H Y + F +++ YPR Sbjct: 121 ALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVT-EKAVFQNIVAYPR 179 >UniRef50_C0ZGC0 Putative DNA-binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGC0_BREBN Length = 185 Score = 169 bits (430), Expect = 3e-41, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 7/184 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + ++ +R++RG++L +A TG+SK +L Q+ER S P++ +LWKI L Sbjct: 1 MRLPIETIGHKIRMIRKERGFTLEIMAGKTGLSKGLLSQVERGISQPSLDSLWKITKALE 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVI-------TSLFPYDPQLCFEHFSIQMASGAISE 113 P F V Q++ ++ SL +++ G ++ Sbjct: 61 SPIIHFFEDIDQKQVHVTRLQKRRQLVFPESTGTYSLLSMGGSAKLGMLEVRLMPGEMAV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + E VI G + + E L G+ + F + TH N GE + Sbjct: 121 DKFVQSEGEECFTVITGSVTARFNDEEHVLEAGDSISFDSSKTHSIENTGETEALLIWSV 180 Query: 174 HYPR 177 + P+ Sbjct: 181 NPPQ 184 >UniRef50_A0KZV5 Transcriptional regulator, XRE family with cupin sensor n=132 Tax=Proteobacteria RepID=A0KZV5_SHESA Length = 208 Score = 169 bits (430), Expect = 3e-41, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 11/184 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M NL + +L+ +R+ +G S LA+ GV+ + + IE+N SP+V++L K+ +G+ Sbjct: 24 MRNLD--IGASLRTVRKMKGLSQRELAKRAGVTNSTISMIEKNSVSPSVSSLKKVLSGIP 81 Query: 61 VPFSTFISPP---QSATPSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + F S +S VY + + + P S G+ Sbjct: 82 MSLVDFFSIEASIESEQKVVYRSDELLDIGTGPLEFKLIGRDFPNRAMSVMSETYPPGSD 141 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + + E +VI+G+ +L V E L G+ F +++ H +RN ++ S Sbjct: 142 TGEEMLKHEGEEAAMVIEGKFELTVGDEVYILEAGDSYYFNSELPHRFRNPFDEPCRLVS 201 Query: 172 LIHY 175 Sbjct: 202 ATTP 205 >UniRef50_B1HN87 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HN87_LYSSC Length = 183 Score = 169 bits (430), Expect = 3e-41, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME ++R L+ LK++RQQR SL +A+ATGVSKA L QIE+ E++PTV+T+WKIA G+ Sbjct: 1 MEQMSRNLAFQLKKIRQQRHLSLDDVAKATGVSKAQLAQIEKGEANPTVSTIWKIAAGMR 60 Query: 61 VPFSTFISPP-------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + FS+ + PP S D + + S+ PY+P+ +E + ++M GA+S Sbjct: 61 ISFSSLLQPPTAHFMRYSSKDVPHVDEDEGRYRVYSIIPYNPERGWEFYKVEMEPGAVSR 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H +GV E V++I GQ + + L+ G+ + F+ H YRN E FH ++ Sbjct: 121 SEAHTEGVEETVMIIKGQAAISAGDMHELLDEGDTLVFSGHQPHEYRNTSEGLTIFHLIL 180 Query: 174 HY 175 Y Sbjct: 181 QY 182 >UniRef50_B0NHK0 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHK0_EUBSP Length = 184 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME L + ++ LK++R+ +G SL + + T +SK+ML Q+ER E +PT++T++K++ GL Sbjct: 1 MERLNQIIAENLKEIRKGKGLSLEQASALTSISKSMLSQLERGEVNPTISTVYKLSLGLK 60 Query: 61 VPFSTF-------ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VP + F S + + +F + FE F ++ G + Sbjct: 61 VPVTAFTLDKPKPFSKTGKSEVVPLSGDDGRYRLYPIFNFRDGQDFEIFDLEFDEGGMMP 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G E + V GQL L L GE + A +IY+N G V ++ Sbjct: 121 GNRQMNGTREFITVYSGQLTLSFQDREYVLEAGEAASYNAFDDYIYKNTGTGMVTASIVV 180 Query: 174 HYP 176 HYP Sbjct: 181 HYP 183 >UniRef50_Q3SUW3 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=Q3SUW3_NITWN Length = 259 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 L + L+++R ++G SL RLA+ +GVS+AMLGQIE +S+PT+ LWKI T L VP Sbjct: 73 ELPVIVGKNLRRIRLRQGLSLERLAKQSGVSRAMLGQIETGKSTPTIGLLWKICTSLTVP 132 Query: 63 FSTFISPPQSATPSVYDPQ--------QQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F++ I+ V Q +LFP+D + E + +++A + Sbjct: 133 FASLIAVGDPEGIIVLRRDGSKLLSSNQGRFTSRALFPFDSERRTEFYELRLAPLYCENA 192 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G E++VV G +++ V TL+ G+ + F ADV H YRN G + ++ Sbjct: 193 EAHAAGTRENLVVAKGSVEIAVGSARPTTLSEGDAMLFEADVPHAYRNLGTDEAVLYLVM 252 Query: 174 HY 175 Y Sbjct: 253 TY 254 >UniRef50_Q3A4K4 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K4_PELCD Length = 188 Score = 169 bits (428), Expect = 5e-41, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 9/181 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + LK R +G ++ L +GVS M+ +IER + P+V L K+A+ L + Sbjct: 2 IKTLIGKKLKTTRLGKGLTIQGLTNLSGVSANMISRIERGLTVPSVKILMKLASALGMSI 61 Query: 64 STFISPPQSATPSVYDPQQQA---------MVITSLFPYDPQLCFEHFSIQMASGAISES 114 F+ + ++ + + Q I+SL F + S Sbjct: 62 GYFVEEAEKSSTVILTRKGQGEPLFFYKDKQQISSLTQGLQDPSFTVLHDTLEKNCNSGD 121 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 P E V+V+ G+L+ + E L G+ + F A + H++RN ++ Sbjct: 122 APMVHTGEEFVMVLKGRLEFIIQDEKYILESGDSLSFKASLPHLWRNLENGPTEVLWVVS 181 Query: 175 Y 175 Sbjct: 182 P 182 >UniRef50_Q3JJ42 DNA-binding protein n=16 Tax=Burkholderia RepID=Q3JJ42_BURP1 Length = 236 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 8/180 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N L + ++ LRQ+ +L A A G+SK L Q+ER +SP++ +L IA L V Sbjct: 55 NAGVALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSITSLAGIAHALGVT 114 Query: 63 FSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 F+ P Q A + L E ++M G Sbjct: 115 VQYFVETPSEERSVCRGDQLRFFSFADSANLFARLTNVPEGRQLEAILVRMPPGQKRSEV 174 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + VI+G++ L ++G+ L+ G+ + + V H + N + + Sbjct: 175 T-THAGEEFLYVIEGEVSLTLEGKSFVLHAGDSAHYQSTVPHSWVNTAKIESVVVWVGTP 233 >UniRef50_Q468H3 Transcriptional regulator, MerR family n=10 Tax=Euryarchaeota RepID=Q468H3_METBF Length = 192 Score = 168 bits (427), Expect = 6e-41, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 78/192 (40%), Gaps = 17/192 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M R + + ++QLR+ R ++ LAEA+ S+ ++ Q+E P++ L KIA L Sbjct: 1 MSEENR-VGSKIRQLREAREMTIEELAEASQSSEELIQQLENGALVPSLTPLLKIARALG 59 Query: 61 VPFSTFISPPQSATPSVYD----------------PQQQAMVITSLFPYDPQLCFEHFSI 104 V TF+ + P + P++ A+ SL E F I Sbjct: 60 VRLGTFLDDMPQSGPVIVRAGLSDNVVRFSGKTEKPRKSALEFYSLASDKADRNMEPFII 119 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + E + ++ G++++ + LN G+ + + + + H G+ Sbjct: 120 DIHPSPDESHQLSSHEGEEFIYILSGEIEIFYGKDVHRLNAGDSIYYDSIIPHDVHAAGK 179 Query: 165 QTVHFHSLIHYP 176 + ++++ P Sbjct: 180 EDAKILAVVYAP 191 >UniRef50_A0LHE5 Transcriptional regulator, XRE family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHE5_SYNFM Length = 204 Score = 168 bits (427), Expect = 7e-41, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 15/183 (8%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +++LRQ+ +L LA TG+SK L QIE N+ P VATL+++A L V F Sbjct: 17 NIGNKVRELRQKNHLTLQDLAVKTGLSKPFLSQIENNKVVPPVATLFRLARALKVALGHF 76 Query: 67 ISPP-QSATPSVYDPQQQ--------------AMVITSLFPYDPQLCFEHFSIQMASGAI 111 + ++ +++ + T+L E F ++ + Sbjct: 77 FQESVEDDRIAITRKKERVRLDRRPHQEKGLVHYIYTALETKKSNKSMEPFLVEFPTQEK 136 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E E + V++GQ++ +TL+ G+ + ++++H +R G +T + Sbjct: 137 EEMVFLSHEGEEFLYVMEGQVEFRTLDRVETLDPGDSIYIESELSHSFRRVGNETARALA 196 Query: 172 LIH 174 ++ Sbjct: 197 VVC 199 >UniRef50_C5BVJ0 Transcriptional regulator, XRE family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BVJ0_BEUC1 Length = 201 Score = 168 bits (426), Expect = 9e-41, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 6/177 (3%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 L L+ LR+Q G +L +A TG+S A+L QIE + P++ +L K+A + +T Sbjct: 23 HVLGDRLRDLRRQHGLTLRDVAGQTGLSVALLSQIENGRTDPSITSLRKLARAFDAEVAT 82 Query: 66 FISPPQSATPSVYDPQQQAMVITSLFPYDPQLC------FEHFSIQMASGAISESTPHEK 119 P + + + P ++ ++ + E +A G +S P Sbjct: 83 LFHEPDAPSVHISRPGERFLLSAPAGLIAYERVTPGRGDLEVLRSVLAPGDVSAEGPRGH 142 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+ G++ + + L GE F + H YRN ++ P Sbjct: 143 ASTECVYVLAGEVVVTIGESDHRLVAGEAATFDSRQPHRYRNDSAANAEILVVVTPP 199 >UniRef50_UPI0001B554B1 hypothetical protein SSPB78_30219 n=2 Tax=Actinomycetales RepID=UPI0001B554B1 Length = 210 Score = 167 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 9/178 (5%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L L LR + G ++S LA A GVS+ ++ QIER +P+ TL K+A L VP F Sbjct: 31 LGRRLSALRARAGLTISALAAAAGVSQGLVSQIERGAGNPSYTTLIKLADALRVPVGAFF 90 Query: 68 SPPQS--ATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 + +V + + + L ++ G + PH Sbjct: 91 DGSEDAWEPAAVVRAGGRRRLSLSDEGLVYELLTPSLHGRLGMMRAEIPPGYSNALAPHR 150 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E +++++G L + V G+ L G+ + + A V H + N G + + P Sbjct: 151 HEGEEVMLLLEGALHVTVGGKESVLEAGDAITYDASVPHRFHNKGTRPAVIVGAMTPP 208 >UniRef50_A9DEU4 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DEU4_9RHIZ Length = 203 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 9/178 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++++R + G +L LA+ +G+S L Q+ER++++P++ TL +A L V F Sbjct: 21 AFGERIREMRHKAGLTLQTLADQSGISVGFLSQVERDKATPSLGTLASVAAALGVDVDVF 80 Query: 67 ISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 IS P+ A + ++ + V + P + + G SE T H Sbjct: 81 ISTPKPADSVTREGERPSFVLADSSLQYERISTVLPGGTLSSLIVHIPVGYASEITAHV- 139 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 E +VV+DG + + L+ G+ + F D H + N G+ PR Sbjct: 140 -GEELIVVLDGTVRQTLGDAAFVLHPGDSLHFMGDTPHSFANVGDVPARLLWTGTSPR 196 >UniRef50_A0PY56 DNA-binding protein, putative n=55 Tax=Bacteria RepID=A0PY56_CLONN Length = 185 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 8/177 (4%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + LKQLR ++G + LA +SK + Q+ER+ +SP++ATL I L F Sbjct: 8 NIGEKLKQLRIEKGLTQMDLASRCELSKGFISQLERDLTSPSIATLVDILECLGTNLKDF 67 Query: 67 ISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 + + + + + P + E + + ++ Sbjct: 68 FNNDEEEKIVFSKEDIFEAEDTELNYNVQWVIPNAQKNMMEPILVTLEPNGQYKNDE-PH 126 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V+ G + + + + GE + A H N G+ + P Sbjct: 127 EGEEFGYVLAGTVYIHLGHKKYKAKKGESFYYKARKNHYISNAGKSLAKVLWVSTPP 183 >UniRef50_D0D911 Transcriptional regulator, XRE family n=1 Tax=Citreicella sp. SE45 RepID=D0D911_9RHOB Length = 205 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 9/179 (5%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 L L+ LR+ G SL L+ +S L QIER+ SSP+V TL K+AT +VP S Sbjct: 22 DSTLGLRLRALRKSHGLSLKELSARASLSVGSLSQIERDLSSPSVRTLNKLATSFDVPLS 81 Query: 65 TFISPPQSATP---SVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISEST 115 F + P + + M + L + ++M + S Sbjct: 82 YFFADPAADEVDGIVIRRDTGHEMDVSAQGIRKHLLTPKALDGLQLMMVRMTPESSSGPE 141 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 + ++ V+ G + L V+G L G+ F + H + G Q + Sbjct: 142 AYGHEGLDAGYVLSGAVRLEVEGRVYLLTEGDSFGFPSTRPHRFECVGTQPAEVLWINT 200 >UniRef50_Q49XM3 Predicted transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Q49XM3_STAS1 Length = 182 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + ++ LK R+Q G+SL L+ T VSK MLGQIER ES P++ TLWKIA GL Sbjct: 1 MKEINDIIAENLKLYRKQNGYSLEHLSYLTEVSKTMLGQIERKESIPSITTLWKIANGLK 60 Query: 61 VPFSTFISPPQSATPSVY-------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F+ + + I F +D + FE + + + G Sbjct: 61 VSFTELTQENDEIIRKITLNDIQPLASEDNKYQIYPYFKFDIEKKFESYMVLIEPGGTMS 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 PH G +E++ V DG L L + E + E ++F A++ H Y N + T+ + +I Sbjct: 121 GEPHGSGTMEYITVFDGTLTLILADEQFIIKENESIKFNANMFHNYANNHDTTIRINMVI 180 Query: 174 HY 175 HY Sbjct: 181 HY 182 >UniRef50_B8JEE6 Transcriptional regulator, XRE family n=3 Tax=Myxococcales RepID=B8JEE6_ANAD2 Length = 260 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 8/182 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++L + T L++LR QR SL +L++ +GVS+AMLGQIE +S+PT+ LWKI++ L+V Sbjct: 74 KDLTPVVGTNLRRLRTQRDLSLEKLSKLSGVSRAMLGQIELGQSAPTINVLWKISSALSV 133 Query: 62 PFSTFISPPQSATPSVYDPQ--------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 PFS I+ + V + + +LFP+D E + ++MA G++ Sbjct: 134 PFSALITARSTGGLHVLRAEHAKVLSSHDGSYSSRALFPFDEPRRVEFYELRMAPGSVER 193 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + H G IE++VV G +++ V G + L G+ + F AD H+YR+ + + ++ Sbjct: 194 ADAHNPGTIENLVVAAGAVEIEVPGRKEQLGTGDAIVFQADAPHVYRSRADVETVMYLVM 253 Query: 174 HY 175 Y Sbjct: 254 TY 255 >UniRef50_C6PVT7 Transcriptional regulator, XRE family n=3 Tax=Clostridium RepID=C6PVT7_9CLOT Length = 182 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 7/182 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + + LK++R +R +L + TGVSKAMLGQIER ES+PT++ LWKI+TGL Sbjct: 1 MNDPTYNIGSVLKRVRFERELTLEETSNLTGVSKAMLGQIERGESNPTISILWKISTGLR 60 Query: 61 VPFSTFISPPQSATPSV-------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + FS + +V M++ +FP++P FE+F I++ GA Sbjct: 61 ISFSELLGSENDDYKAVSIDDIEPVYESDGKMILYDVFPFNPLSGFEYFYIKLLPGAHHV 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 STPH+ V E++VV G L L + + L +RF + +H Y N ++ V F ++I Sbjct: 121 STPHQSSVEEYIVVTKGTLKLTLGEQTFELTSPAALRFKPNKSHTYSNPYDEEVIFQNVI 180 Query: 174 HY 175 Y Sbjct: 181 KY 182 >UniRef50_Q28QP9 Transcriptional regulator, XRE family with cupin sensor n=7 Tax=Rhodobacteraceae RepID=Q28QP9_JANSC Length = 205 Score = 166 bits (420), Expect = 4e-40, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 75/178 (42%), Gaps = 9/178 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 N L +++ R+Q +L L + G+S L Q+ER +++P++ TL +IA GL+V Sbjct: 6 SNNDPALGALIRKRRKQLDLTLQALCDDAGLSVGYLSQVERGQATPSLGTLAQIAQGLSV 65 Query: 62 PFSTFISPPQSATPSVYDPQQ-------QAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 FI+ P+ A + +++ S+ P + + + G SE Sbjct: 66 ELEYFIATPKPADSLSRGGARPQFSIDGSSILYESVGADFPGAELSCYILHVPPGYASEV 125 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + ++ G++ + G+ L G+ + ++ H + N + T Sbjct: 126 V--HHEGEEIIFLLSGEITQTLGGQSFILQQGDSLHYSGSTPHSWSNETQATTRILWT 181 >UniRef50_D1A8D2 Transcriptional regulator, XRE family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A8D2_THECD Length = 187 Score = 166 bits (420), Expect = 4e-40, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 11/184 (5%) Query: 1 MEN---LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIAT 57 M + + ++ T++ LR GWSL +LA GVSK +L +E+ +P + TL +I+ Sbjct: 1 MNDQSTIGAAVARTVRSLRAGHGWSLDQLAVRAGVSKGVLVALEQGRGNPNLGTLIRISQ 60 Query: 58 GLNVPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASG 109 L VP + + + V+ P++Q ++ L + + E + ++ G Sbjct: 61 ALGVPLTRLVQVEEEPAVRVFPPERQVVLWRGPDGGSGVLLAGSEARPSVELWRWELRPG 120 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 S PH G E + V +G L + VDG+ + G FA D H Y N G F Sbjct: 121 EPRHSDPHAPGTREILYVEEGTLTVTVDGQSHPVEAGSAALFAGDRPHSYSNEGTTVCRF 180 Query: 170 HSLI 173 + Sbjct: 181 VLTV 184 >UniRef50_B8FLW0 Transcriptional regulator, XRE family n=2 Tax=Desulfobacteraceae RepID=B8FLW0_DESAA Length = 184 Score = 166 bits (420), Expect = 5e-40, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 4/172 (2%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS 68 + LR+ + L LA TG++ L +IE E+ P+V +L +IA L V + F+ Sbjct: 13 GQRIHDLRKDKDMDLETLANETGLAVDTLEKIESGENMPSVGSLLQIARALEVDSAFFLE 72 Query: 69 PPQSAT----PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEH 124 T Y + T+L P + F I++ + ++ E Sbjct: 73 KEVKTTKKGLAKAYSERTSHYAYTTLSPGARHKHMKAFKIEIPPKQEHDGVSYQHEGEEF 132 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V V+ G++++ V L G + F + + H+ +N GE +++ P Sbjct: 133 VYVLSGKVEVTVGEHVNKLEEGGSLHFNSGLRHLLKNPGEDAALLLVVVYTP 184 >UniRef50_B5ZXQ7 Transcriptional regulator, XRE family n=9 Tax=Rhizobium RepID=B5ZXQ7_RHILW Length = 189 Score = 166 bits (420), Expect = 5e-40, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 11/184 (5%) Query: 1 MEN-LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGL 59 ME L + + +++LR +G +L LA A+GVS+AM+ +IER E+SPT + L +I L Sbjct: 1 MEEQLEQAIGIRIRKLRLDKGLTLDDLATASGVSRAMISRIERAEASPTASLLARICAAL 60 Query: 60 NVPFSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAI 111 + S F + + Q+Q + S+ + ++ +GA Sbjct: 61 GLSLSAFFAEEGEQAAPLARRQEQQVWRDPETGYLRRSVSAPGTASDVDIVEVEFPAGAR 120 Query: 112 SESTPH--EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 PH G+ +H+ + DG+L++ L G+ + H++ N G + Sbjct: 121 VSFPPHAASHGMTQHIWLFDGELEMTAGEAVYRLRPGDCLFMPVGEGHVFHNPGNAPARY 180 Query: 170 HSLI 173 ++ Sbjct: 181 CVVL 184 >UniRef50_A9ABP2 Transcriptional regulator, XRE family n=5 Tax=Burkholderia multivorans RepID=A9ABP2_BURM1 Length = 281 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + +++LR++ +L +A +S L Q+ER+ + ++++L +A LN Sbjct: 1 MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISE 113 VP I P+ A P + ++++ L ++M G Sbjct: 61 VPLGALIDQPRQAQPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEG--YR 118 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S G E V V+ G++ + + L+ G+ + F A H N G+ ++ Sbjct: 119 SEWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 178 Query: 174 HYP 176 P Sbjct: 179 TLP 181 >UniRef50_B5EB42 Transcriptional regulator, XRE family n=11 Tax=Desulfuromonadales RepID=B5EB42_GEOBB Length = 188 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 16/183 (8%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +K+LR R +L +A TG S A++ QIE + SP +ATL KIA +V + F Sbjct: 6 NIGPRIKKLRLARKLTLQAVANETGFSPALISQIENDNVSPPIATLSKIAKFFDVKLAQF 65 Query: 67 ISPPQSATPS-VYDPQQQ--------------AMVITSLFPYDPQLCFEHFSIQMASGAI 111 S + V Q+ SL Y + F + + A Sbjct: 66 FSEDEDNRRFEVVRADQRTIVPRVISKEGTRQGYFYESLSFYKQNKKMDAFMVTLTEKA- 124 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E+ + E + V++G D ++ + TLN G+ + F + + H + + V Sbjct: 125 PEANTYSHDGEEFIYVMNGTADFILEDQKITLNEGDSLYFESTLGHRLLSHDGKEVRVLV 184 Query: 172 LIH 174 ++ Sbjct: 185 VVT 187 >UniRef50_A7GIC6 DNA-binding protein n=17 Tax=Firmicutes RepID=A7GIC6_CLOBL Length = 189 Score = 165 bits (418), Expect = 6e-40, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 76/182 (41%), Gaps = 10/182 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + +K+LR + +L L+E T +S L Q+ER ++ + +L KIA L+V Sbjct: 1 MIDDIGKKIKKLRTNKKLTLKELSEKTNLSIGFLSQLERGLTTVAIDSLTKIAKELDVSL 60 Query: 64 STFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMAS-GAISES 114 + F P+ V ++ + +L F I++ + Sbjct: 61 TYFFQAPKKNKKIVLRSYEKEILQVENNRFIKYNLSNDLEDKSFLPRLIEILPTDSKENI 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 ++ E V V++G L L ++ + + L G+ + + + H + N + V ++ H Sbjct: 121 ISYQHKGEEFVYVLEGILTLFINDDEKELYPGDSAHYDSSINHNWANYTSKPVRLLTV-H 179 Query: 175 YP 176 P Sbjct: 180 TP 181 >UniRef50_Q39C45 Transcriptional regulator, XRE family with cupin sensor n=34 Tax=Burkholderia RepID=Q39C45_BURS3 Length = 286 Score = 165 bits (418), Expect = 7e-40, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 9/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + +++LR++ +L +A +S L Q+ER+ + ++++L +A L+ Sbjct: 26 MDSDLMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISLSSLVNVAKALD 85 Query: 61 VPFSTFISPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISE 113 VP S I P+ A P ++ +++ L +QM G Sbjct: 86 VPLSALIDQPRQAQPDSHEGRRKPYALDARSQWYERLSTTFDGSQINALKVQMMEG--YR 143 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S G E V V+ G++ V + L+ G+ + F A H N G+ ++ Sbjct: 144 SEWVAHGGDEFVYVLAGRICYTVGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVG 203 Query: 174 HYP 176 P Sbjct: 204 TLP 206 >UniRef50_Q2SLI4 Predicted transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLI4_HAHCH Length = 192 Score = 165 bits (418), Expect = 8e-40, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 11/182 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L L ++QLR+ +L +LA+ + VS++ML QIER +++PT ATLW + + + Sbjct: 5 DLVARLGKRIQQLRKSEKLTLEQLAQQSNVSRSMLSQIERGQANPTFATLWNLTRAMGIE 64 Query: 63 FSTFISPPQ-----------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 +S + + +A D Q ++ L P E + ++M Sbjct: 65 WSELVDESEGVSHSPIEHIIAAQTPKIDNPQGGYHLSILSPPHLVGSIEWYELRMRPQGK 124 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 ES H +G +EH+ V+ GQL++ + Q L G+ R+ ADV H +N G+ Sbjct: 125 LESQAHTQGCMEHLTVLSGQLEVVSGTQSQRLAQGDTARYHADVAHTIQNPGDSDTIALL 184 Query: 172 LI 173 ++ Sbjct: 185 VV 186 >UniRef50_C0C2L3 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2L3_9CLOT Length = 215 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E+L + ++ LK++R+ + SL + + T +SK+ML Q+ER E +PT++T++K++ GL Sbjct: 32 LEDLNQLIADNLKEIRRSKALSLEQTSSLTSISKSMLSQLERGEVNPTISTVYKLSLGLK 91 Query: 61 VPFSTF-------ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VP + F S A S + +F + FE F + G Sbjct: 92 VPVTAFTAPKPTPFSQTSKAEVSPLVSDDGRYRLYPVFSFRDGQDFEIFDFEFDEGGQMA 151 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G E + V GQL L L G+ + A +IY+N G+ + ++ Sbjct: 152 GNRQMAGTREFITVYSGQLTLIFKDREYVLEAGDSAAYNAFDDYIYKNTGKGMITACIVV 211 Query: 174 HYP 176 HYP Sbjct: 212 HYP 214 >UniRef50_A9ALB0 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=A9ALB0_BURM1 Length = 193 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 8/178 (4%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 A L + ++ LRQ+ +L A A G+SK L Q+ER +SP++ +L IA L V Sbjct: 14 AAALGSKIRALRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQ 73 Query: 65 TFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 F+ P Q A + L E ++M G Sbjct: 74 YFVDTPSEERSVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVT- 132 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E + V++G++ L ++G+ L G+ + + V H + N + + Sbjct: 133 THAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTP 190 >UniRef50_C0QJV6 Transcriptional regulator (Cro/CI family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJV6_DESAH Length = 190 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 19/188 (10%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + +S +K+ R + +L LA+ TG++K L ++ER++ +P +TL KIA L Sbjct: 1 MDE--KIISVNIKRFRTSKRLTLQELADRTGLTKGYLSKVERSQKAPPYSTLSKIAAALE 58 Query: 61 VPFSTFIS----PPQSATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQM 106 V +T +S P++ + Q+ L P E F I Sbjct: 59 VEITTLLSQGIDSPKNVPLCLSRKAQRTLIPGTEQFPGYDYELLAEKKPGKNMEPFIIHA 118 Query: 107 ASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 A + E + V+DGQL+ + L+ G+ V F + + H+ ++ G + Sbjct: 119 PFEAQRT---YSHEGEEFIYVMDGQLEFYYGDDTYHLDPGDNVYFDSVIPHVGKSMGHEK 175 Query: 167 VHFHSLIH 174 +I+ Sbjct: 176 SKLLVVIY 183 >UniRef50_D2QWJ8 Transcriptional regulator, XRE family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWJ8_9PLAN Length = 183 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 10/175 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 LS ++++R G +L LAE TG+++ ++ +IE +P++ TL KIA V + Sbjct: 5 QLSQRIREMRTSAGLTLEELAEKTGMTRGVISKIENFRVTPSLPTLAKIAEAFGVSTADL 64 Query: 67 ISP-PQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 ++ Q V +++ A+ +L E +++ G + Sbjct: 65 LAGLDQRPQIVVVRKEERQEITRDGSAIRYFALAHKRAIKLMEPMLLEIQPGKGRDEKL- 123 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E V+V+DG ++ E L G+ + V H RN G + Sbjct: 124 AHEGEEFVMVVDGTIEYEYGDESYRLEPGDCIYDDGSVQHTLRNVGRSIARLIVV 178 >UniRef50_A6UHX0 Transcriptional regulator, XRE family n=5 Tax=Rhizobiaceae RepID=A6UHX0_SINMW Length = 193 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 14/179 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +K LR ++ L +LA TG+S AML +IER + PT+ TL +IA V F Sbjct: 14 AIGPRIKALRLRKKLGLVQLAGHTGLSPAMLSKIERGQMFPTLPTLLRIAMVFGVGLDHF 73 Query: 67 IS-PPQSATPSVYDPQQQ------------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + + ++ +Q+ A + SL + F + + Sbjct: 74 FNVDKEEPLIAIVRKEQRLKLPSPPGEKHPAFLFESLDYPASDRRMDAFYAEFPVDS-PP 132 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S PH+ G E + V+ G+L + V+G+ L+ G+ V F + V H YR+ G++ + Sbjct: 133 SEPHQHGSAEFIYVLSGRLIVNVNGKECALDTGDAVYFDSSVPHSYRHEGKEISTAIVV 191 >UniRef50_Q1AT52 Transcriptional regulator, XRE family with cupin sensor n=12 Tax=Bacteria RepID=Q1AT52_RUBXD Length = 220 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 14/186 (7%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N ++L +++ R ++G +LS ++ +SK+ML +IE ++SP++ T+ ++A L V Sbjct: 23 NPDQYLGNFIRKYRLEKGLTLSDISARASISKSMLSKIENGQASPSLHTIARLAQALGVT 82 Query: 63 FSTFISP-----------PQSATPSVYDPQQQAMVITSLFPYD--PQLCFEHFSIQMASG 109 ST S V + L Y+ P+ FE F I + Sbjct: 83 LSTMFSNYDIPSDNAQLVKAGKGMEVVRRGTREGHTYHLLAYNKGPKQLFEPFLITIK-N 141 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 E IE + +++G+L L G+ + F D+ H + + F Sbjct: 142 KSETFPTFEHTGIEFIYMLEGKLKYRYGQFTYLLEPGDALTFHGDIPHGPEQLIDVPIRF 201 Query: 170 HSLIHY 175 ++I+Y Sbjct: 202 LAIINY 207 >UniRef50_Q880R5 Transcriptional regulator, putative n=3 Tax=Pseudomonas RepID=Q880R5_PSESM Length = 212 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 8/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + ++ L++LR +R S+ LA TGVS+AML QIE S P++ L KIA GL V Sbjct: 26 DLIGPRVARNLQRLRSKRYLSMDALARLTGVSRAMLAQIESGRSVPSIKVLCKIAKGLKV 85 Query: 62 PFSTFISPPQSATPSVYDPQQQA--------MVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F+ + Q V +LFP+D E + I++ + Sbjct: 86 SIAAFLEDRAFEGVELLPAQHSKRLVSASGVFVSRALFPFDMARQSEFYEIRLGALGEEI 145 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H GV E++VV G L++ V+ E L+ G+ + F AD H YRN + ++ Sbjct: 146 SNGHGPGVQENLVVAQGVLEVSVNEERYLLSTGDSILFYADQPHRYRNPADSEALAFLVM 205 Query: 174 HYP 176 YP Sbjct: 206 TYP 208 >UniRef50_A8U412 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=alpha proteobacterium BAL199 RepID=A8U412_9PROT Length = 201 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 9/182 (4%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R + ++ LR+ RG +L+ LA G+S +ML +ER E + TV L +IA L + Sbjct: 20 RAIGNRVRTLRKARGNTLATLAARAGLSVSMLSAVERGEKAATVLVLHRIAGALGSTIAR 79 Query: 66 FISPPQSATPSVYD-------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST-PH 117 + +V P + + P P + FE + G + PH Sbjct: 80 LVEDETPVRATVLRHDRQVIVPGEGGWTRRIVSPVVPGIEFEMMQTTLPPGVNAGEYGPH 139 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF-HSLIHYP 176 + E+++V++G+L L +DG L G+ + H YRN G T + ++I P Sbjct: 140 QADSHEYLLVLEGELTLTLDGTEHCLAAGDAIHHDGQCRHGYRNDGAVTCRYVLAMIERP 199 Query: 177 RS 178 R+ Sbjct: 200 RT 201 >UniRef50_C4IIY7 Transcriptional regulator n=3 Tax=Bacteria RepID=C4IIY7_CLOBU Length = 183 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 11/182 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + R +S LK +R+ + SL ++E TGVSK+MLGQIER ES+PTVA L KI +GL Sbjct: 1 MDYINRNVSINLKNIRKSKKMSLDVVSEQTGVSKSMLGQIERGESNPTVAILGKIVSGLR 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQA-------MVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F+ + P+ V + + + FPY+ FE + I++ G + Sbjct: 61 VSFNDLVCMPKEEIYIVKKESLEPSKESTDQYSVYTYFPYEEDRNFEIYMIEIKPGGVYT 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ----TVHF 169 + H + E++ VI G+L L +D + + G+ VRF D H+Y N + F Sbjct: 121 TGSHGEKTCEYINVIKGELTLEIDEKKYVIKSGDAVRFNTDKDHVYINDTNELLSFNAVF 180 Query: 170 HS 171 + Sbjct: 181 YW 182 >UniRef50_A5UJ53 Predicted transcriptional regulator n=37 Tax=cellular organisms RepID=A5UJ53_METS3 Length = 193 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 17/192 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N + + +K L + R SL LA + V+ ++ +I E P++ L KIA L Sbjct: 1 MPNKNK-IGEKIKTLMEVRNVSLDELANDSDVNIELVEKILNGEIIPSLTPLTKIARVLG 59 Query: 61 VPFSTFISPPQSATPSVYDP----------------QQQAMVITSLFPYDPQLCFEHFSI 104 V TFI + P V + + SL E F I Sbjct: 60 VRIGTFIDDDEQTGPLVVRKGKSDKVVYFSGDENKTENSNLEFYSLAAGKSDRNMEPFII 119 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 A E + V++G +++ L G+ + + + V+H + + Sbjct: 120 DFKVDAEESHELSSHEGEEFLYVLEGTIEVIYGQNNYVLETGDSIYYDSIVSHHVHSSND 179 Query: 165 QTVHFHSLIHYP 176 +T ++I+ P Sbjct: 180 ETAKILAVIYTP 191 >UniRef50_B2T7X7 Transcriptional regulator, XRE family n=55 Tax=Burkholderia RepID=B2T7X7_BURPP Length = 212 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 9/176 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +++LR +R +L L+ A GVSK+ML +IER++++PT+A W++ L V + Sbjct: 34 RVGEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSL 93 Query: 67 ISPPQSATPSVYDPQQQ---------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 +P ++ + + P + FE + + + G S H Sbjct: 94 FAPQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIELAGKFEWYELTLQPGGALVSNAH 153 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E G EH+ V+ G +++ G + L + R+ AD H RN G+ ++ Sbjct: 154 EPGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAVRNAGKGEAKALLVV 209 >UniRef50_B5HZF0 Transcriptional regulatory protein n=21 Tax=Streptomyces RepID=B5HZF0_9ACTO Length = 201 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 8/184 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++ L + L+ +K+ R +RG++L LA GVS+ ML QIE+ ++P++ T+ KI L Sbjct: 15 LDLLTQSLARNVKRWRTERGFTLDTLAARAGVSRGMLIQIEQARTNPSLGTVVKIGDALG 74 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAIS 112 + +T + Q + +Q + L + E + ++ G S Sbjct: 75 ISITTLLDYEQGPKVRIVPAEQAVRLWHTDAGSYNRLLAGAEAPGPLEMWDWRLMPGESS 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 S PH G +E V V+ G+L L VDG + G F A+ H Y N G + Sbjct: 135 PSDPHPTGTVELVHVMAGELTLTVDGVEHRVPAGASASFEANTPHTYGNQGAVPMEMVMA 194 Query: 173 IHYP 176 + P Sbjct: 195 VSVP 198 >UniRef50_D1SEA5 Transcriptional regulator, XRE family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SEA5_9ACTO Length = 207 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 8/181 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ ++ LR RGWS LA +GVSK ML QIE ++P++ TL ++A V Sbjct: 11 VTSAVARQVRDLRAARGWSFEELAGRSGVSKGMLVQIEGARTNPSIGTLCRVADAFGVSI 70 Query: 64 STFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISEST 115 + + P + +T V + ++ L E + +M G S Sbjct: 71 ARLLEPAEQSTVRVSAADEAPVLWRGPNGGLARLLSGLGEPDLVELWDWRMEPGEALRSP 130 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H G E + V+DG + VDG + GE V F AD H YR G+ V ++ Sbjct: 131 DHAHGTREILHVLDGVATVTVDGVDHDVRAGETVEFHADREHGYRTAGDGPVRLMMVVVT 190 Query: 176 P 176 P Sbjct: 191 P 191 >UniRef50_B2JW16 Transcriptional regulator, XRE family n=10 Tax=Proteobacteria RepID=B2JW16_BURP8 Length = 234 Score = 162 bits (412), Expect = 4e-39, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 21/189 (11%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 L T L+ R + +L LAE G S+++L ++E ++P++ATL +IA L+ + + Sbjct: 45 LGTRLRHARMVQQLTLKALAEQAGCSESLLSKVEGGHATPSLATLHRIALALDTNIAALV 104 Query: 68 SPPQSATPSVYDPQQQA--------------------MVITSLFPYDPQLCFEHFSIQMA 107 S P + + ++ +++ L P + + Sbjct: 105 SGPVATVTPIQRASERPSVRFPGAQQTAGRHARARSSIMLERLVVAGPGQLLQGDIHVLE 164 Query: 108 SGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 A S+ E V++G+L+L + E L G+ F + H YRN G+ Sbjct: 165 PLARSDEQ-ISHAGEELGYVLEGELELTLGSECYRLQAGDSFYFPSTEPHSYRNPGDVIT 223 Query: 168 HFHSLIHYP 176 + P Sbjct: 224 RVLWINTPP 232 >UniRef50_A6CW39 Transcriptional regulator, XRE family with cupin sensor protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CW39_9VIBR Length = 182 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 7/179 (3%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + K LR++ G S LA+ GV+ + QIE N SP+VA+L K+ + + Sbjct: 1 METEIGPRFKALRERAGLSQRELAKRAGVTNGFISQIESNAVSPSVASLSKLLSKIPSSM 60 Query: 64 STFISPPQSATPSVYDPQQQ-------AMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + F + + + +QQ + + Y ++ GA + Sbjct: 61 AEFFAVDEPKPDQFFSRKQQQPEIGRGKISYRQIGHYHDDRQIGMLRETLSPGADTGDEM 120 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E V++ G+L+L VD E L+ G+ F + TH +RN + S Sbjct: 121 LAHEGQECGVIVQGELELTVDSEVVVLHEGDSYYFDSTRTHRFRNTSDIDCIIVSANSP 179 >UniRef50_C0Z512 Putative DNA-binding protein n=3 Tax=Bacillales RepID=C0Z512_BREBN Length = 189 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 9/177 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + +K LR + +L ++AE T +S + L Q+ER +SS T+ +L KI+ L V Sbjct: 1 MEPTIGVLIKSLRVGKKKTLKQIAEKTQLSISFLSQVERGKSSITLESLKKISEALGVSP 60 Query: 64 STFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 F S S + V L + ++ Sbjct: 61 GYFFSGESSGGNEQVRRASKERSGLLHAPFVYEDLSSDLVNPTLVPILVTLSPHGEKGM- 119 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 P E + V++G L + + E L G+ + + V H + N + F + Sbjct: 120 PFVHQGQEFIYVLEGVLTVLLGEEEHDLFPGDSIHMDSSVPHNWVNRTGEVTRFLCV 176 >UniRef50_A8TJX2 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJX2_9PROT Length = 192 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 20/190 (10%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME L + L+QLR++RG +L LA TG++K L +IE + P +ATL +IA + Sbjct: 1 MEEL---IGPRLRQLRKRRGVTLETLAAGTGLTKGYLSKIETGKMVPPIATLSRIAQAIG 57 Query: 61 VPFSTFISPPQ-----SATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQ 105 + F Q SV +Q ++ + F Sbjct: 58 CDMAYFFQSQQGADAFDDRVSVVRADEQRPAVRGGSSFGYDYRNIAHTLRSKAMDSFIFT 117 Query: 106 MASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQ 165 + + T E E V V++G + + G TL G+ V F + + H ++ G Q Sbjct: 118 FPA-ELQGDTFFEHQGEELVFVLNGTVVFEIAGRELTLEAGDSVYFDSSLPHRGKSKGAQ 176 Query: 166 TVHFHSLIHY 175 +IH Sbjct: 177 -AQALVIIHR 185 >UniRef50_Q484W4 DNA-binding protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q484W4_COLP3 Length = 185 Score = 162 bits (411), Expect = 5e-39, Method: Composition-based stats. Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 1/174 (0%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + + LK R +GWSL ++ T VSKAMLGQIER ESSPTVA LW IATG ++P Sbjct: 4 NFNNAIGSQLKLARTNKGWSLDIASKNTNVSKAMLGQIERGESSPTVARLWDIATGFHLP 63 Query: 63 FSTFISPPQSATPSV-YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 S F + S + + I++LFP+D + E FS+ +AS S PH GV Sbjct: 64 LSYFFLAIEDDDVSKNMLNSEAGISISTLFPFDVETKSEVFSLTLASLHQQISAPHNDGV 123 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 IEH++VI+G ++ ++G+W L+ G+ V+F A+ H YRN E FH++I Y Sbjct: 124 IEHILVIEGDMEYLLNGQWHHLSKGDVVKFNANQKHGYRNVSEHQAVFHNIICY 177 >UniRef50_Q2BZH4 Transcriptional regulator, HTH_3 family protein n=3 Tax=Vibrionaceae RepID=Q2BZH4_9GAMM Length = 183 Score = 162 bits (410), Expect = 6e-39, Method: Composition-based stats. Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 4/177 (2%) Query: 1 MEN--LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATG 58 M +S LK LR+++ SL ++ TGVSKAMLGQIER ESSPTVATLWKI++G Sbjct: 2 MNEEIFKARISKHLKALREKQKLSLDATSKLTGVSKAMLGQIERKESSPTVATLWKISSG 61 Query: 59 LNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 LN F+ F S ++ P M + +L YDP + FE F I + S+PH+ Sbjct: 62 LNSSFTAFFSDQNDTDGRIF-PADIDMHVKTLITYDPTVRFEMFEITLTHFHTQHSSPHK 120 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G IEH VV +G+L + +D +W L+ GE +RF AD H YR ++V FH+++ Y Sbjct: 121 TGTIEHSVVTEGELGVYIDDKWHYLSKGESIRFEADKPHDYRAVT-ESVVFHNIVSY 176 >UniRef50_A1AL86 Transcriptional regulator, MerR family n=3 Tax=Bacteria RepID=A1AL86_PELPD Length = 192 Score = 161 bits (409), Expect = 7e-39, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 17/192 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + R + + +R+ G + +LAE S+ ++ +E+ E +P++ L KI L Sbjct: 1 MTDRNR-IGDKITTIRESLGLTREQLAERCDCSETVIAGLEQGELAPSLTPLIKITRTLG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQ----------------QAMVITSLFPYDPQLCFEHFSI 104 V T + P V + A+ SL E F I Sbjct: 60 VRLGTLLDDDTMLGPVVTRSGENNGISRVKSLEIASNAGALDFFSLAANKTARHMEPFII 119 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + + E + ++DG +++ + L G+ + + + V H R+ G Sbjct: 120 NVKPACKGGAPLSSHEGEEFIYILDGTVEVEYGKDLYQLEPGDSIYYDSIVPHQLRSRGS 179 Query: 165 QTVHFHSLIHYP 176 + ++++ P Sbjct: 180 DSARILAVVYAP 191 >UniRef50_C0C4F2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0C4F2_9CLOT Length = 183 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 102/183 (55%), Gaps = 7/183 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + ++ +++LR++ S+ L++ + VSK+ML QIER E++PT++TLWKI+ G+ Sbjct: 1 MDPMNMIVAKNIRRLREENKLSMEELSKLSSVSKSMLAQIERGEANPTISTLWKISNGMK 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 VPF P+++ V + + +FP D F + +++ G+ E Sbjct: 61 VPFDHLTVRPKTSYEIVNTSEIQPLLEDGGRVKNYPVFPDDENRRFAVYYLELDKGSYWE 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH KG E + + G +++ G+ T+ GE +RF AD TH Y+N G++T H +I Sbjct: 121 SEPHLKGTTEFITIFAGCVEISAGGQQFTVGRGESIRFRADSTHSYKNTGDETAILHMII 180 Query: 174 HYP 176 + P Sbjct: 181 YNP 183 >UniRef50_D1YD37 Cupin domain protein n=3 Tax=Propionibacterium acnes RepID=D1YD37_PROAC Length = 258 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E LA + +KQ R R W+L +LA GVS+ +L +E+ +P V TL +++ L V Sbjct: 70 EPLAHAIGARVKQQRMARRWTLDQLARYAGVSRRVLVNVEQGAVNPRVGTLLRLSDALGV 129 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISE 113 + PP S P + Q A + T + +P E + +A + Sbjct: 130 GLPALVEPPASRAPKLTRNGQGAALWTGEAGGKGMLVAGTEPPEVVELWDWTLAPSERHD 189 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H G E + V +G + + VDG L G+ + F D H Y N + + F + Sbjct: 190 SEAHSDGTRELLHVQEGTVTVEVDGNRYDLAPGDALSFYGDAAHAYINSTDNSARFSLTV 249 Query: 174 HYP 176 P Sbjct: 250 FEP 252 >UniRef50_A4AHT0 Transcriptional regulator, MerR family protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHT0_9ACTN Length = 169 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 11/166 (6%) Query: 21 WSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDP 80 +L++LA + +S A++ QIER +++P+ TL ++A GL +P F V Sbjct: 1 MTLAQLAAKSELSPAIVSQIERGKANPSFTTLAQLAHGLEIPVGRFFVGHAEPASPVVRS 60 Query: 81 QQQAMV-----------ITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVID 129 + + + L + E I G + +TP G E +V+ Sbjct: 61 GDRRNLKGVTRESVGEAVHELLTPEQNGLIEAQWIVSPPGHDTSATPFHHGGEEFGIVMS 120 Query: 130 GQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G++D+ +DGE TL G+ + FA+ H Y N E++ + Sbjct: 121 GKIDVYLDGERHTLTAGDSITFASTTPHWYVNRYEESCVAIWVSTP 166 >UniRef50_B9JLN2 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JLN2_AGRRK Length = 205 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 13/181 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L T L+ RQ G +L LA A S+++L +IE ++SP++ L ++ L Sbjct: 23 RLGTRLRLARQMLGMTLKALAVAADCSESLLSKIENGKASPSLPMLHRLVEVLGTNIGWM 82 Query: 67 ISPPQSATPSVYDPQQQ------------AMVITSLFPYDPQLCFEHFSIQMASGAISES 114 V+ + + + + PY P + + G S + Sbjct: 83 FEEADGEEGIVFRAGTRPLIGLDPLRRGEGISLERIIPYSPGHLLQCNIHHIEPGGES-A 141 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 P + E ++ G ++L V + L+ G+ F +++ H YRN G + Sbjct: 142 GPIQHAGEEVGYLLAGSIELMVGEKTFRLSIGDSFVFRSELPHWYRNVGTTRASIFWVNT 201 Query: 175 Y 175 Sbjct: 202 P 202 >UniRef50_B7RR11 Transcriptional regulator, XRE family with Cupin sensor domain n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR11_9RHOB Length = 204 Score = 161 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 14/186 (7%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ + T +Q+RQ +G SL L+E +GVS + QIER+ ++P++ L I LNV Sbjct: 10 EDTPGAIGETFRQMRQNQGISLRELSEKSGVSVGTISQIERDLANPSMRVLTAIRRALNV 69 Query: 62 PFSTFI---------SPPQSATPSVYDPQQQAMV-----ITSLFPYDPQLCFEHFSIQMA 107 P S P + ++ + L + + + Sbjct: 70 PMQVMFGDDSGTTADSDADGDPPFLRRAAKRPRIDLGSLHKELLTSGGNHNLQIMILTIE 129 Query: 108 SGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 G S +T + +V++G+L L VD L G+ F + H +RN G++ Sbjct: 130 PGGTSGNTTLSYPAEKGGLVLEGELMLSVDNREAHLEEGDSFVFDSAQPHAFRNDGDRPA 189 Query: 168 HFHSLI 173 +I Sbjct: 190 RILWVI 195 >UniRef50_A6F756 DNA-binding protein n=1 Tax=Moritella sp. PE36 RepID=A6F756_9GAMM Length = 214 Score = 161 bits (408), Expect = 9e-39, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 99/195 (50%), Gaps = 19/195 (9%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N+ L + LK R +GWSL + ++ TGVSKAMLGQIER ESSPTV LW IA G +P Sbjct: 20 NIHTSLGSRLKTARSNKGWSLDKTSQHTGVSKAMLGQIERGESSPTVVKLWNIANGFELP 79 Query: 63 FSTFISPPQSATPSV------------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA 110 S F++ + + I +LFPYDP E F I + Sbjct: 80 LSYFLTDLAQTQAETSANTSLNTALNKLQNSEDDIHIVTLFPYDPLTKLEVFQITLDPQR 139 Query: 111 ISESTPHEKGVIEHVVVIDGQLDL-------CVDGEWQTLNCGEGVRFAADVTHIYRNGG 163 S PH GV+EH++ +DG ++ + +W L G+ ++F AD H YRN Sbjct: 140 EHISAPHNAGVVEHIIAVDGTMEYFLALTADGIAQQWHALKQGQSIKFNADQQHGYRNMT 199 Query: 164 EQTVHFHSLIHYPRS 178 E+ V H++I Y ++ Sbjct: 200 EKPVTIHNIISYTQT 214 >UniRef50_A1WMB1 Transcriptional regulator, XRE family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WMB1_VEREI Length = 208 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 14/188 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + +++LR + G ++++++E G+S+ ML +IE + + TL +IA L V Sbjct: 20 LEESVGAAIRELRLREGLTIAQVSEQAGISRGMLSKIETGSTMAGLDTLARIARTLGVAM 79 Query: 64 STFISP-----------PQSATPSVYDPQQQAMVITSLFPYDPQ--LCFEHFSIQMASGA 110 S + A V ++ L Y FE F I MA + Sbjct: 80 SALFGKYDASAAMAQHVKRGAGMEVVRRGTKSGHSYHLLAYGQGPVKWFEPFLITMADDS 139 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + + E + +++G ++ + L G+ + F H N + + F Sbjct: 140 QRYPSF-QHPGTEFLYMLEGVIEYRCGQQTYVLEPGDALSFDGQALHGPENLMQCPIRFL 198 Query: 171 SLIHYPRS 178 S+I YPRS Sbjct: 199 SIIIYPRS 206 >UniRef50_C1ZLV1 Putative transcriptional regulator with cupin domain n=2 Tax=Bacteria RepID=C1ZLV1_PLALI Length = 189 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 71/179 (39%), Gaps = 12/179 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L+ +K R + +L ++A TG++++ ++E +P++ +L +IA L V S Sbjct: 5 ELAQRIKNHRIDQRLTLDQVASRTGLTRSWWSKVENFRITPSLQSLGQIAAALGVSVSDL 64 Query: 67 ISP-PQSATPSVYDPQQQAMV----------ITSLFPYDPQLCFEHFSIQMASGAISEST 115 + + +V ++ +V SL P + F + + +G + Sbjct: 65 VEGLDRKPQMAVIRKSERKVVERNPETSDIVYESLAHVRPDRAMDPFLLTVPAGGQRK-D 123 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E ++V+ G++ L + E L G+ + F A H N + + Sbjct: 124 ALGHEGEEFLLVLSGKVQLEYNNEMLELEEGDSLYFDATTPHRLVNPFTTDTRVLCVFY 182 >UniRef50_B1ZY56 Transcriptional regulator, XRE family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZY56_OPITP Length = 204 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 8/180 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ ++ ++ + R ++ SL LA + VSK ML QIE+ + +PT+A + KIATGL V Sbjct: 21 EHSSQIIAKKILTERHRQKLSLGDLAVRSDVSKGMLSQIEQGKRNPTIAVMSKIATGLRV 80 Query: 62 PFSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISE 113 P + + V + + +L P D + E + + + Sbjct: 81 PLARLLPDDGPRVWRVIRANDENHILFDNDEHQLRTLSPIDLEKQVEFYELILHPHGKLV 140 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH +G E + V G + + + L G+ +AADV H N G + ++ Sbjct: 141 SDPHARGAEEILTVAKGHVQVKSGEKETELRRGDSAYYAADVPHAIVNLGNTEAVAYMIV 200 >UniRef50_C3MAN4 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=C3MAN4_RHISN Length = 220 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 7/180 (3%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 ++ + L+ +R S LA+ GV+ + + IE N S+P+V L +I G+ + Sbjct: 39 MSVDIGNRLRHVRLMHNLSQRELAKRAGVTNSTISLIESNASNPSVGALKRILDGIPIGL 98 Query: 64 STFIS-PPQSATPSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + F S P+ + Y ++ + + + GA + Sbjct: 99 AEFFSFEPERPRKAFYAAEELVEIGKGPISYRQIGDNLFGRSLQILKECYQPGADTGKVL 158 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E +V+ G+L++ VD E + L G+ F + H +R G S P Sbjct: 159 LVHEGEEGGIVLSGRLEVTVDDERRILGPGDAYYFESRRPHRFRCVGPVPCEVISACTPP 218 >UniRef50_C3MCD7 Transcriptional regulator, XRE family n=7 Tax=Proteobacteria RepID=C3MCD7_RHISN Length = 244 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 77/187 (41%), Gaps = 15/187 (8%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + ++ R++ G ++S +A AT +S ML +IE +SP++ TL +A L VP Sbjct: 53 LEVAIGHEVRAFRKKLGITVSDVAAATDISVGMLSKIENGNTSPSLTTLQTLARALGVPI 112 Query: 64 STFISPPQSATPSVYDPQQQAMVITSLFPYDP--------------QLCFEHFSIQMASG 109 ++F + +V+ + + + + E + I + Sbjct: 113 TSFFRGFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTAGVVVEPYLITLTED 172 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 + T + G +E + +++G++ + G+ + F AD H + + Sbjct: 173 SDVFPTF-QHGGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTRLPIRY 231 Query: 170 HSLIHYP 176 S+I YP Sbjct: 232 LSIISYP 238 >UniRef50_A6UEP3 Transcriptional regulator, XRE family n=29 Tax=Alphaproteobacteria RepID=A6UEP3_SINMW Length = 234 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 76/188 (40%), Gaps = 15/188 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + ++ R++ G +++ +A AT +S ML +IE +SP++ TL ++ L VP Sbjct: 43 LEVAIGHEVRAFRKKLGITVADVASATDISVGMLSKIENGNTSPSLTTLQTLSRALGVPI 102 Query: 64 STFISPPQSATPSVYDPQQQAMVITSLFPYDP--------------QLCFEHFSIQMASG 109 + F + +V+ + + + + E + I + Sbjct: 103 TAFFRRFEEEHSAVFVKAGEGVDVERRGTRAGHQYNLLGHIGSNTSGVVVEPYLITLTEN 162 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 + T + +E + +++G++ + G+ + F AD H + + Sbjct: 163 SDIFPTF-QHDGLEFLYMLEGEVVYRHGNNLYRMTPGDSLFFDADAPHGPEELTTLPIRY 221 Query: 170 HSLIHYPR 177 S+I YPR Sbjct: 222 LSIISYPR 229 >UniRef50_A5TWB6 Possible transcriptional regulator n=3 Tax=Fusobacterium RepID=A5TWB6_FUSNP Length = 182 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 8/181 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L +S +K++RQ++ SL LA+ + VSK+ML QIER E +PT++TLWKIA G+ Sbjct: 1 MDRLNILVSENIKRIRQEKNLSLGDLAKLSDVSKSMLAQIERGEGNPTLSTLWKIANGMQ 60 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 V F+T I+ P+ + + SLF D + F + I++ Sbjct: 61 VSFNTLIAQPKLPYKVTKLAEIEPILDMNGGLKNYSLFS-DIENNFSVYQIEVGKEISWI 119 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S H G E V+VI G L++ ++ + L GE + F AD+ H Y N E T FH+++ Sbjct: 120 SEAHLSGTAEFVIVIQGTLEIKLEEKTFILKKGENLWFKADIPHGYCNLDEGTTIFHNIL 179 Query: 174 H 174 + Sbjct: 180 Y 180 >UniRef50_A0LGL4 Transcriptional regulator, XRE family n=9 Tax=Deltaproteobacteria RepID=A0LGL4_SYNFM Length = 209 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 80/186 (43%), Gaps = 14/186 (7%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 + + T +++ R+Q+ ++S LA TG+ +A L +E + P++ L KIA L + Sbjct: 23 SEKIGTRVRKYREQKSLTVSELASRTGLDEAFLEAVEEHNVYPSLGPLLKIARALGLRLG 82 Query: 65 TFISPPQSATPSVYDPQQQA--------------MVITSLFPYDPQLCFEHFSIQMASGA 110 TF+ + P + ++ + SL E F I++ + Sbjct: 83 TFLDDQEVGDPLIVRVGERKEELSMLKGKDKPVTLRFHSLGRGKGDRHMEPFYIEILPES 142 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + E +VV+ G++++ E L G+ + + + V H + G + + Sbjct: 143 ARDKKLSAHEGEEFIVVLSGEVEVIYGQETHVLKAGDSIYYNSVVPHYVSSIGSRKAEIY 202 Query: 171 SLIHYP 176 +++++P Sbjct: 203 AVLYFP 208 >UniRef50_A3JV98 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JV98_9RHOB Length = 195 Score = 160 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 12/177 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + ++ LR ++ L++L T +S ML +IER + PT+ TL +IA V F Sbjct: 14 RIGQKIRALRTEKALGLTQLGNHTDLSAGMLSKIERGQVIPTLPTLLRIAMVFGVGLEHF 73 Query: 67 ISPPQSATPSVYDPQQQ-----------AMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + T + +++ + SL + F + A + S Sbjct: 74 FEEGDAPTLEIVRSKERLKMPDTMERMPSYYFESLDFPVNDRPIDSFLSEFVPRAKA-SE 132 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 PHE IE V VI G L++ + + L + + F A H Y+ + Sbjct: 133 PHEHEGIELVYVISGVLEIHIHDDVHQLAAKDSIYFDATHPHSYKCASPDKATAVIV 189 >UniRef50_B0PEN9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEN9_9FIRM Length = 188 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 10/181 (5%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 L +K R+++ SL LA VS + L QIE ++ P++ TL +I+T L V S Sbjct: 2 SQLGMNIKAERKKQNISLQELASWVQVSTSFLSQIENEKNEPSLTTLKRISTCLGVTVSK 61 Query: 66 FISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 + +S + + + + I + +DP E + S P+ Sbjct: 62 LLGEDESVRLMMIKKESRHRLTNLGDGLEIEFISAFDPAQVMEACIHVLTPDGQSGKVPY 121 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVR-FAADVTHIYRNGG-EQTVHFHSLIHY 175 E V++G++ L VD E + G+ +H + N E+T + + Sbjct: 122 THAGQEIFFVLEGRIKLNVDDEVMEMEEGDSYYLIDCSKSHYFFNASTEETARVLCVTNP 181 Query: 176 P 176 P Sbjct: 182 P 182 >UniRef50_Q1AWJ9 Transcriptional regulator, XRE family with cupin sensor n=2 Tax=Bacteria RepID=Q1AWJ9_RUBXD Length = 203 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 9/181 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+ R + ++ LR++RG +L LA +GVS+AM+ ++ER E PT+ ++A GL V Sbjct: 11 EDAVRRVGERVRMLRRERGLTLEGLAGRSGVSRAMISKVERGEKVPTLVVAARLAEGLGV 70 Query: 62 PFSTFISPPQSATPS--------VYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS- 112 S + + L P E + G+ S Sbjct: 71 SLSELAGERERRRVVVVRREERMTMRDPRTGFERQLLSPGFGGRGVEFIRNVIPEGSTSG 130 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E PH GV E++VV G+L + G L G+ + FAADV H + N GE ++ + Sbjct: 131 EFPPHRPGVEEYLVVERGRLLAVLGGAEHLLGEGDALYFAADVPHRFDNAGEGECSYYLV 190 Query: 173 I 173 I Sbjct: 191 I 191 >UniRef50_C3WFC8 Transcriptional regulator n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFC8_FUSMR Length = 187 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 9/185 (4%) Query: 1 MEN--LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATG 58 M+N L L ++ R + ++ L+E G++ +ML QIER+ +P++ATL I+ Sbjct: 1 MKNDILDLGLGKKIQNYRLNKKLTIKELSEKIGMTSSMLSQIERDLVNPSIATLRAISKA 60 Query: 59 LNVPFSTFISPPQSATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAI 111 L+VP F + V ++++ V L D + E + + S + Sbjct: 61 LDVPLFMFFKEENNEELVVRANSRKSIGLPENNEVRYELLTPDTKGSIEFCMMNIPSYSF 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 +E E ++ G++ + + LN G+ +R A H + N + V Sbjct: 121 TEEIGQSHSGEEVAFILKGKVKIAIGSREYILNEGDSIRIPALTEHRWINEEKDEVKVIF 180 Query: 172 LIHYP 176 I+ P Sbjct: 181 AINPP 185 >UniRef50_Q0S834 Possible transcriptional regulator n=3 Tax=Rhodococcus RepID=Q0S834_RHOSR Length = 187 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 11/186 (5%) Query: 1 MEN----LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIA 56 M+ LA + T ++ R G +L +A TG+S+ L Q E S P+V L ++A Sbjct: 1 MDEDQHLLAVAIGTAIRSARHDAGLTLRDVAAKTGLSQPFLSQAENGHSVPSVMNLHRVA 60 Query: 57 TGLNVPFSTFISPPQSATPSVYDPQQQAMVITS-----LFPYDPQLCFEHFSIQMASGAI 111 L + S+ ++ S F E + G+ Sbjct: 61 QVLGTTAHALLEQGARTPTSLVRSREGRRFALSDGAVLRFCSTGVRAMEPNEVTAQPGSQ 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 + E E + VIDG + + V E L+ G+ + + A V H + N + F Sbjct: 121 AGEHT-EHAGEEFIYVIDGSVRVEVGVEESYVLDKGDTLYYPATVPHRWFNDAAEPARFL 179 Query: 171 SLIHYP 176 P Sbjct: 180 ITSTPP 185 >UniRef50_Q1LFU9 Transcriptional regulator, XRE family with cupin sensor domain n=2 Tax=Cupriavidus RepID=Q1LFU9_RALME Length = 212 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 13/180 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ L +LR+ G +L LA+ ++K+ L ++ER SSPT+ T+ K+A L V Sbjct: 29 SIAERLAELRKLNGLTLEELAQRASLTKSYLSKLERGLSSPTIGTVLKLADALGVTVDQL 88 Query: 67 ISPPQSATPSVY-DPQQQ----------AMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 I+ A ++ + ++ P + F + + + E Sbjct: 89 ITRSSRANEILHIRAADRIPFSPSTERLGYTYEAIATERPDKAMQPFIM-VPPFTLEEDQ 147 Query: 116 PH-EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 P E + V+ G++++ D ++ G+ + F A + H R+ G ++ Sbjct: 148 PMASHAGEELIFVVSGEMEVLFDDRTVRMSAGDSLYFNASIPHRSRSLGRIQAQALVVVS 207 >UniRef50_B6JAK2 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JAK2_OLICO Length = 202 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 12/181 (6%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 ++ L ++ RQQRG SL +LA ATG++K+ L ++ER + P++ T K++ Sbjct: 19 VSSSLGERIRFARQQRGMSLEQLATATGLTKSYLSKVERQLAVPSITTALKVSRVFGQTV 78 Query: 64 STFISPP-QSATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + ++ + ++ I ++ P E F ++ Sbjct: 79 GQLLGESLDESSLCIVRKNERHRFLKNDTHNGYNIEAIASSLPHKRMEPFVMR-PPHKFH 137 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + V+ GQ+++ L G+ + F + H R+ GE + Sbjct: 138 SDRRFTHAGEELIFVLSGQIEIEFIDRTVLLEAGDALYFNSHNPHRSRSIGETRAEALVV 197 Query: 173 I 173 + Sbjct: 198 V 198 >UniRef50_B6BB48 Transcriptional regulator, XRE family n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BB48_9RHOB Length = 218 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L+ LRQ + L++L E TG+S AML +IER + PT+ATL +IA V F Sbjct: 30 RIGPKLRSLRQGKDMGLAQLGEHTGLSAAMLSRIERGQVFPTLATLLRIAMVFGVGLDHF 89 Query: 67 ISPPQSATP-SVYDPQQQ-----------AMVITSLFPYDPQLCFEHFSIQMASGAISES 114 P + A + + + + + SL + F+ + + SG SES Sbjct: 90 FGPGEDAPVLEIVRQRDRLKLGDKTSGPLSYLFESLDFPVTKSRFQSYLAEF-SGNGSES 148 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PH E + VI+G L+L + G + L+ G+ + F A H YR Q ++ Sbjct: 149 MPHAHPGAEMIYVIEGVLELGIHGRTEVLDKGDSIYFDAGFAHSYRAVPGQRCRALVVVS 208 >UniRef50_C3JX63 DNA-binding protein n=3 Tax=Corynebacterineae RepID=C3JX63_RHOER Length = 196 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 74/177 (41%), Gaps = 12/177 (6%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 ++ L+ R++ G +L LAE TG++K+ L ++ER S+P++A KIA L+ Sbjct: 1 MAAFLRTHRRRAGLTLEGLAEQTGLTKSYLSKVERGISTPSIAVALKIARVLDADVGQLF 60 Query: 68 SPP-QSATPSVYDPQQQAM---------VITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 S + ++ + + + V + P + F + ++ Sbjct: 61 SDSMEGNAMTIVRAKDRVIDPANSVQSSVYDPIAPSLVGKAMQPFVVH--PASVMGPKFM 118 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 + E V V G ++ + G+ L+ G+ + F A+ H R+ +++ Sbjct: 119 DHTGEEFVFVHSGSVEFEIPGQTMHLDAGDSLYFDANTPHRMRSVSADRAVVLVVVY 175 >UniRef50_Q7WPD8 Putative transcriptional regulator n=1 Tax=Bordetella bronchiseptica RepID=Q7WPD8_BORBR Length = 201 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 82/195 (42%), Gaps = 20/195 (10%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + R + ++++R+++ SL LA +GV+ ML QIER+ +P++ TL +I L+VP Sbjct: 4 DDTRLVGQAIRRIRKEKKISLQTLAARSGVATGMLSQIERDLGNPSLKTLARIRQALDVP 63 Query: 63 FSTFI----------SPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSI 104 S + V + ++ L P Q + + Sbjct: 64 LSALFEADDETAADAAGAGDLAAHVRRNGTRRVMQFGTPLMTKEMLTPPAGQR-LQFMVL 122 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + G S + P + +V+ G +L +DG+ L G+ +F H++RN + Sbjct: 123 NIQPGGTSGAPPLSYAAEKGGMVLQGAFELELDGQTLQLQRGDSFQFDGATPHVFRNPYD 182 Query: 165 QTVHFHSLI-HYPRS 178 + +I H P + Sbjct: 183 EPASILWIIAHEPAA 197 >UniRef50_B1M8P3 Transcriptional regulator, XRE family n=2 Tax=Methylobacterium RepID=B1M8P3_METRJ Length = 202 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 9/180 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ +++ R+++G SL LA +GVS++M+ +IER+E+ P+ L ++A L V FS Sbjct: 21 HIAEEIRRRRREQGLSLETLAARSGVSRSMISKIERSEAVPSTVVLSRLAEALGVTFSRL 80 Query: 67 ISPPQSAT--------PSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAIS-ESTPH 117 ++P + + + + P P + + GA + E T H Sbjct: 81 MAPATEREILLIPASRQPILRDEASGYLRRCISPVLPGRGIDWVLNTLPPGASTGEFTAH 140 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPR 177 +GV E++ V+ G+L + + G+ + F AD H + N G + + +I R Sbjct: 141 RRGVSEYIYVLRGRLRAVIGERAVIMETGDSLYFEADAGHAFTNVGTEACEYFLVIDPSR 200 >UniRef50_B5EKJ2 Transcriptional regulator, XRE family n=4 Tax=Bacteria RepID=B5EKJ2_ACIF5 Length = 181 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 10/178 (5%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + ++QLR+ RGWS+ LA +S + L QIE ++SP++ATL KI L +P + Sbjct: 2 EQVCKKIRQLREDRGWSVRGLAARAEISPSALSQIEAGQNSPSIATLEKICAALQIPIAA 61 Query: 66 FISPPQSAT-PSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAISESTP 116 ++A P + + L PQ + + + G P Sbjct: 62 IFDDGETAGLPWIMRSGDRRKFYSAGSHASLEPLARGLPQKKMQPLLMVLEPGGECGEHP 121 Query: 117 HE-KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + E +VI G G L G+ + + + H + N G ++ Sbjct: 122 YTSAEGEEFTIVIRGTAAFEQSGVTTELGEGDAIYYDPRLPHNWHNRGHSATTLLVVV 179 >UniRef50_C6JKA9 Transcription regulator n=5 Tax=Bacteria RepID=C6JKA9_FUSVA Length = 185 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 8/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + + +K++R ++G L +AE +S +ML QIE+ ++P++ T+ IA L +P Sbjct: 2 DKEINVGAIIKRIRIEKGLLLKDVAEKCEISSSMLSQIEKGNANPSLNTIKSIAQALEIP 61 Query: 63 FSTFISPPQSATPS--VYDPQQQAM-----VITSLFPYDPQLCFEHFSIQM-ASGAISES 114 F P+ S + + + + + L + E + A + Sbjct: 62 LFKFFIEPEKEDISINILKKEDRKIINTKKIRYELLSPEGPTNIECMKMTFTEKNAETSI 121 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 P E +++ G++ + + + + G+ V A H + N + Sbjct: 122 EPMAHKGEEVAILLSGKVKITIGNQSCEMEPGDSVYIPALKPHKWTNLNAGESVVLFSVT 181 Query: 175 YP 176 P Sbjct: 182 PP 183 >UniRef50_Q026G4 Transcriptional regulator, XRE family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q026G4_SOLUE Length = 225 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 13/183 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+QLR ++ +L L TG+S +ML Q+E + PT+ATL +I+ +V F Sbjct: 42 IGRKLRQLRLRKKIALVDLGRHTGLSASMLSQLENGKLVPTLATLARISMVFDVGLEHFF 101 Query: 68 SPPQSATP-SVYDPQQQ------------AMVITSLFPYDPQLCFEHFSIQMASGAISES 114 + ++ ++ A L + + + ++ Sbjct: 102 GNRRGQKTFALVRAAERLRFPERADAPKPAYFFECLAFAAQSKGLQAYVAEFPPRRAADV 161 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H E + V++G L + +GE L G+ V F + H YR E + Sbjct: 162 QEHFHEGAELIFVLEGSLAIRFEGEDHILQQGDSVYFDSSEPHSYRGVAEAPARAIVVTT 221 Query: 175 YPR 177 PR Sbjct: 222 PPR 224 >UniRef50_Q7UR68 Probable transcription regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UR68_RHOBA Length = 233 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 12/176 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L+ L+QLR RG +L +A+ +G +K+ L ++E +P++ L +A+ L V S+ Sbjct: 54 ELAQRLRQLRLDRGMTLDEVAQKSGQTKSWLSRVENFRITPSLPALADLASSLGVSTSSL 113 Query: 67 ISPPQSATPSVY----------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + V ++ SL + F +++ SG E P Sbjct: 114 LEGLDDRPQIVCVRHDERKKIQRDPDSSIEYYSLASERTHRTMDPFLLKIPSGE--EREP 171 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + V+ G++ + TL+ G+ + F ++V H N L Sbjct: 172 RTHEGEEFLTVLKGRVRFFYGEQEFTLSKGDSLYFDSEVEHCLANPFANDAEVICL 227 >UniRef50_A5N4Z4 Transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4Z4_CLOK5 Length = 179 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 11/180 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +K+LR ++G +L ++E TG+S L Q ER ++ V L IAT LNV + F Sbjct: 2 NIGEKVKELRNKKGLTLKTMSEKTGLSTGFLSQFERGITTIAVEHLSTIATVLNVRINYF 61 Query: 67 ISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMAS-GAISESTPHE 118 + + Q V SL Y I++ + Sbjct: 62 FDDEEKE--LIIRSYDQPFVRQINKAIYKSLSRYPEDKMLSPELIELLPKDEHQYPDIYA 119 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 E + V++G L L +D L G+ + + H + N + V F ++ HYP S Sbjct: 120 HQGEEFIYVLEGILTLIIDENIFKLYPGDSAHYLSTQKHNWDNQTNKVVKFITV-HYPSS 178 >UniRef50_Q1GM81 Transcriptional regulator, XRE family with cupin sensor n=9 Tax=Alphaproteobacteria RepID=Q1GM81_SILST Length = 190 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 7/179 (3%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 L L+ +R++ S LA+ TGV + + IE + +P+V L +I G+ + S Sbjct: 10 DEDLGPRLRSVREKANLSQRALAKKTGVPNSTISLIESGKMNPSVGALRRILDGIPISLS 69 Query: 65 TFIS-PPQSATPSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 F + P++ S Y + + + + GA + + Sbjct: 70 DFFAFEPETEKASFYAAEDLTEIGKGKVSLKQVGANLFGRQMMILYETYEIGADTGRVMY 129 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E +V+ G++++ V + + L G+ F + H +R G + S P Sbjct: 130 GHEGEEGGIVLSGRIEITVGAQRKILGPGDAYYFDSRAPHRFRQVGPEKCVLVSACTPP 188 >UniRef50_C6QBJ6 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBJ6_9RHIZ Length = 213 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ + L+ LR++ G SL +LA +GVS+AMLGQIE +S+PT+ L +IA L V Sbjct: 22 LSIIVGENLRHLRRKSGLSLEQLAAKSGVSRAMLGQIETGKSAPTINLLGRIAEALQVSV 81 Query: 64 STFISPPQSATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + IS P + + + +LFP+ E + + + + + Sbjct: 82 PSLISHPAAGGTVIVPRDRATVLASSNGGFTCRALFPWGDPQSIEIYEVTIIAHHSEDVA 141 Query: 116 PHEKGVIEHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E GV + +VV+ G+++L + + L+ G+ + F AD H N G ++ Sbjct: 142 AFEPGVKKALVVLTGEIELTIAEDSPARLSEGDSIIFNADSPHTLHNPGNADAKAFLVVA 201 Query: 175 Y 175 Sbjct: 202 P 202 >UniRef50_A3TY07 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TY07_9RHOB Length = 213 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 75/187 (40%), Gaps = 12/187 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L ++QLR+ RG +L +A+ +G++ + + +IER +PT +A GL V Sbjct: 17 EQGRAELGQRIRQLREARGLTLQTIADRSGLAISTISKIERGLMAPTYDRFSGLARGLGV 76 Query: 62 PFSTFISPP----QSATPSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + SP ++ T ++ + + LFP + Sbjct: 77 DVTHLFSPGGRRFEAGTVALARAGEFGFLETENYAYEMLFPDVRGKAMIPMCGTLKPLQK 136 Query: 112 SESTPH-EKGVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 E ++V+ G++ + ++G E L+ G+ + F + H+Y G++ Sbjct: 137 MSFERMVNHPGEEFLMVMSGRVVVQLEGREEIVLDTGDSLYFDSGRGHLYAAEGDEGARI 196 Query: 170 HSLIHYP 176 + P Sbjct: 197 LVVCTAP 203 >UniRef50_B8FE71 Transcriptional regulator, XRE family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE71_DESAA Length = 527 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 5/177 (2%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 T+K+LR+ W+ LA+ATG + + +E +E SP+V+ L ++A L + Sbjct: 351 DSSFGATIKKLREGHDWTREALAQATGQTPEFIASVESDELSPSVSFLLRLARALGIDPG 410 Query: 65 TFISPPQ-----SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 TF+ + Y + Q+ L P F I + S + ++ Sbjct: 411 TFLRDEEKSAIRDQRAKAYAKRTQSYSYEVLTPDAENEHLRAFMITIESRKDHKPVEYKH 470 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V V+DG L+L +D L GE RF +++ H ++ + +++ P Sbjct: 471 EGEEFVFVLDGDLELTLDSRPHVLKPGESKRFNSEIPHKLKSLSDMETRCLVVLYTP 527 >UniRef50_B9R695 Helix-turn-helix domain protein n=2 Tax=Labrenzia RepID=B9R695_9RHOB Length = 183 Score = 158 bits (400), Expect = 9e-38, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 11/185 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L+ L LR+ +G SL LAE +G+S+A L +IER ++SPT A L ++AT Sbjct: 1 MND--QDLAQRLIGLRKTKGLSLDELAEKSGISRATLSRIERGDTSPTAAALGRLATAFG 58 Query: 61 VPFSTFISPPQSA--------TPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGA-I 111 V + +A +V+ + S+ P + +GA I Sbjct: 59 VSVADLFGLGAAAHDAKLAQNEQAVWRDPETGFQRRSVSPAISGFRGSVIEGTLPAGAII 118 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + P + H+V++ G L + + L+ G+ +RF + + Y G + + Sbjct: 119 SYAAPPLPDLEHHLVLLSGALTVVLGDTRHDLSPGDCLRFRLNTPNAYHATGSKPARYLL 178 Query: 172 LIHYP 176 + P Sbjct: 179 TVITP 183 >UniRef50_C7M2J9 Transcriptional regulator, XRE family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2J9_ACIFD Length = 205 Score = 157 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 5/180 (2%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ + L+ R+QRG SL+ +AE TG+SK L ++ER+ SP++ +L IA + Sbjct: 1 MQAPRFPIGERLRHAREQRGLSLAAVAERTGLSKGFLSRVERDGVSPSIDSLVAIADAVG 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAM----VITSLFPYDPQLCFEHFSIQMASGAISESTP 116 + + + D + V +L A G Sbjct: 61 LAVADVFAVAPVVVSRSVDRFPDGLPGEGVRDTLLSPPDDRRVTVLETVAAPGGSGGDEL 120 Query: 117 HE-KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + +E V+ G+++L E TL+ G+ FAAD H +RN G+ ++ Sbjct: 121 YHLPSQVELCYVVAGRIELVFASECYTLDAGDSATFAADAAHTWRNLGDGEARVLWVLAP 180 >UniRef50_C2HHC8 Transcriptional regulator n=2 Tax=Finegoldia magna RepID=C2HHC8_PEPMA Length = 179 Score = 157 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 69/178 (38%), Gaps = 10/178 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + ++ LR + G + LAE + ++K + Q+ER+ +SP+V +L + L +TF Sbjct: 2 EIGEKIRSLRLKLGLTQEELAERSDLTKGFISQLERDLTSPSVDSLNDLLNALGTDMATF 61 Query: 67 ISPPQSATPSVYDPQQQA-------MVITSLFPYDPQLCFEHFSIQM-ASGAISESTPHE 118 S Q+ IT L P E I + G E P Sbjct: 62 FMDKPSVKEIFTKDDYQSSEDLSMNSTITWLVPKSQVNTMEPVIITLNQKGETKEYNPF- 120 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E V++G ++ +D E LN G+ + T + N G + ++ P Sbjct: 121 -EGEEFGYVLEGSCNIYLDNEIYKLNKGDCFYTKCNKTRMLENNGTKICKVIWVMSPP 177 >UniRef50_C5RJ85 Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ85_CLOCL Length = 182 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 6/181 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + +S +K++RQ+R +L LA TGVSK+ML +IER SPT++ L KI G+N Sbjct: 1 MISTSETISRNIKRIRQERNLTLDDLAILTGVSKSMLSEIERCTKSPTISVLEKICDGIN 60 Query: 61 VPFSTFISPPQSATPSVYD------PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 VP + + + + + LF + P FE F +A + +S Sbjct: 61 VPLAQLTHTEMPQVSVITNDTVKNYSAWKGFELFVLFEFSPDKKFEIFRHVIAPHSERKS 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 HE G+ E+++ G + + + L GE ++F A+ H Y N Q V+ L++ Sbjct: 121 ELHEAGIREYIICTKGVFSIQIGDKTFNLQEGEALQFLANCKHKYFNSTNQEVNIIMLLY 180 Query: 175 Y 175 + Sbjct: 181 H 181 >UniRef50_C4Z9Q8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=C4Z9Q8_EUBR3 Length = 189 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 7/174 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L+ +S LK++RQ +G SL ++AE TGVSK+ML QIE+ ++P++ L KI +GL Sbjct: 3 MDYLSHNVSENLKRIRQSKGMSLDQVAEQTGVSKSMLAQIEKGTANPSIGVLGKITSGLR 62 Query: 61 VPFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + F I PP+ + + + FPY+ E + I + G + Sbjct: 63 IEFQRLIDPPRVDYALISPDDLVPTKELLGQYRVWTCFPYEDSREVEVYRIDVEPGGVYT 122 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 S H + E++ V DG L + Q ++ G+ +F D H+YRN G++ Sbjct: 123 SGGHGEKTREYLTVTDGVLTVECHDHVQEIHRGQVYKFETDQPHLYRNDGDRVA 176 >UniRef50_A8I9H1 Helix-turn-helix XRE-family like protein n=2 Tax=Rhizobiales RepID=A8I9H1_AZOC5 Length = 216 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 11/177 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L L+QLRQ+RG +L RLA + +++ L +ER +P++ L ++AT L V + Sbjct: 27 RLGPNLRQLRQERGMTLDRLAAESALTRGYLSLVERGLKTPSITALLRVATALGVNIAQL 86 Query: 67 IS--PPQSATPSVYDPQQQA------MVITSLFPYDPQLCFEHFSIQ--MASGAISESTP 116 +A ++ + L + + F + G + Sbjct: 87 FDLNAAPTARYTLTRHGDARALEDGTFGLMPLAARRARKMMDPFLLTPAFKPGGRIDPRW 146 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 G E + V+ G++ + + E L G+ + F ++ H R+ G + +I Sbjct: 147 -AHGGEEFLFVVSGRVSIRLGSEDMELGPGDSLYFEGEIKHEVRSLGREKAQVLVVI 202 >UniRef50_C1XM81 Predicted transcriptional regulator n=2 Tax=Deinococci RepID=C1XM81_MEIRU Length = 186 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 72/173 (41%), Gaps = 5/173 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ R +G +L ++A+ +G+ K+ + ++ERN ++ +VA+L K+ L++ + Sbjct: 12 IGPRLRAARLAKGLTLEQVAQRSGLDKSFISRLERNATAASVASLLKVCAALDIQPGSLF 71 Query: 68 SPPQSATPSVYDPQQQAM----VITSLFPYDPQLCFEHFSIQMASGAISESTPHE-KGVI 122 PP + + V + + ++ G P+ Sbjct: 72 DPPSTNLVRSGEAPSAHFGGWGVRDFILSRGLRGELMLLRTEIEPGGHGGKEPYSFPSDT 131 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + V V++G L+ + TL G+ + F+ H +RN G+ ++ Sbjct: 132 DVVTVLEGSLEFTIGETRYTLYPGDSLTFSGKEPHTWRNPGKSRAVVLWVLSP 184 >UniRef50_Q1AS09 Transcriptional regulator, MerR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AS09_RUBXD Length = 292 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 70/174 (40%), Gaps = 8/174 (4%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS 68 L++LR + +L ++EATG+S + + +ER S +VA+L ++A V Sbjct: 119 GERLRRLRVKARKTLKEVSEATGLSISFISALERGGSGASVASLRRLAEAYGVTMRELFG 178 Query: 69 PPQSATPSVYDPQQQAMVITSLFPYDPQ-----LCFEHFSIQMASGAISESTPHEKGVIE 123 + ++ ++ + + +++ +GA SE + E Sbjct: 179 TDLEQNSPLVRAHERPVMEWDNGVRFEEMAPGKKAMDPSYVRVPAGAGSEG-FYSHDGEE 237 Query: 124 HVVVIDGQLDLCVDGE-WQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V VI G + + + + + G+ + F + H + G++ V + P Sbjct: 238 FVYVISGTMYVELKDQGTYAVGPGDTLYFHSTTPHRWWA-GDEPVEAVYVNTPP 290 >UniRef50_C6D6V3 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D6V3_PAESJ Length = 182 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 73/172 (42%), Gaps = 5/172 (2%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + + ++ +R+++ +++++ E TG+S+ + Q+E N++SP++ TL IA L VP + + Sbjct: 3 IGSAIRAIRKRKNITIAQICEETGLSQGFMSQVETNKTSPSITTLESIANALKVPLAYLL 62 Query: 68 SPPQSATPSVYDPQQQAMVITS----LFPYDPQLCFEHFSIQMASGAISESTPHEKGVIE 123 + V ++ + +++ GA + H E Sbjct: 63 LDKKEKMQIVRKDGRRITTSGPDKLKVSHLSSTKNVHMMIVELPPGASTGEN-HAHEGEE 121 Query: 124 HVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 VVI G + + + L+ G+ + A H +N G T ++ Sbjct: 122 VHVVIQGTIYIEQGEDAAELSAGDSFSWNACTPHTVKNIGRDTAIVMISVYT 173 >UniRef50_A0PPF1 Transcriptional regulator n=13 Tax=Bacteria RepID=A0PPF1_MYCUA Length = 180 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQ 71 L+ +R+QRG +L +LA+ G++K+ L +IER +S+P++A K+A L+V S Sbjct: 5 LRAVRRQRGLTLEQLAQRAGLTKSYLSKIERGQSTPSIAVALKVARALDVDVGRLFSDES 64 Query: 72 SATPSVYDPQQQAM-----VITSLFPYDPQLCFEHFSIQMASGAI-SESTPH-EKGVIEH 124 + D + L F ++ +G + PH E E Sbjct: 65 AHETITADRAHDRLGPQSGRYHVLASTQLGKTMSPFVVRPTAGQDCASDGPHPEHTGQEF 124 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 V V G ++L + TL G+ F A V H R G + + Sbjct: 125 VFVHTGSVELDYGDQTITLGTGDSAYFDASVGHKLRAVGTERAEVVVV 172 >UniRef50_B9JI22 Transcriptional regulator protein n=3 Tax=Rhizobiales RepID=B9JI22_AGRRK Length = 204 Score = 156 bits (396), Expect = 3e-37, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 10/181 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + ++ LR +R SL+ LA TG+S L QIER SS V +W +A L+V Sbjct: 16 NEVDVLVGRRVRALRLERNLSLAELATRTGISIGALSQIERGMSSLRVRVIWPLAAALDV 75 Query: 62 PFSTFI---SPPQSATPSVYDPQQQAMVITS-----LFPYDPQLCFEHFSIQMASGAISE 113 S I P + V ++ + + + P + + G +E Sbjct: 76 EPSALIVDGGEPVNDLYCVRANSRRPLPVRAEGISKDLLSPPGAALTGMQVIVEPGGGTE 135 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + + E V G+++L VD L G+ F + + H +RN G + + Sbjct: 136 T--YAHTGHEFGCVTAGEVELVVDATRYLLKTGDSFAFKSTLPHSFRNAGTERCTILWVN 193 Query: 174 H 174 Sbjct: 194 T 194 >UniRef50_Q6MKI2 Putative DNA-binding protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MKI2_BDEBA Length = 188 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 9/184 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + LA+ L+ + +LR++R + + LA+ GV ++ L +E +P++ L K+ L V Sbjct: 5 DVLAQNLAAQITELRKKRQLTQAALAKLAGVPRSTLTNMESGMGNPSLVNLAKVCAALQV 64 Query: 62 PFSTFISPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F ++ P+S T + + + + + L P DP +++ GA Sbjct: 65 SFEELLATPRSQTKLIRKDEIPANKKAKGNVTVYKLLP-DPIPGMAIDRMELEVGARMGG 123 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PH G E++ + GQ+ + V GE L G+ + F D H Y N G S++ Sbjct: 124 IPHSSGTKEYLHCVQGQMTVVVSGESFELKPGDVLAFPGDSAHNYVNTGATKAIGLSVVT 183 Query: 175 -YPR 177 PR Sbjct: 184 MTPR 187 >UniRef50_A5V718 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V718_SPHWW Length = 201 Score = 156 bits (395), Expect = 4e-37, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 70/179 (39%), Gaps = 8/179 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + ++ R++ +L+ +A + +S + + ER +++P++ +L ++A L+V Sbjct: 12 DPMMSFGELIRDRRKRLKLTLNEVALRSDLSVSFISLAERGKATPSIVSLLRLAQALDVD 71 Query: 63 FSTFISPPQSATPSVYDPQ------QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 S F++PPQ+ + L + F + G I Sbjct: 72 ISYFLAPPQTNNILHRAADPEYYPIDSPVTYIRLSAGHVNQKMDSFIYIIPPGPIFPRV- 130 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + +++G+L V + L G+ + F ++ RN GE+ V + Sbjct: 131 -HRDGESFYYMLEGELHFEVGDDSFDLGPGDSLHFDTRHSYAMRNCGEKPVKVLWVGTP 188 >UniRef50_Q2T0D8 DNA-binding protein n=48 Tax=Bacteria RepID=Q2T0D8_BURTA Length = 224 Score = 155 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 10/173 (5%) Query: 11 TLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPP 70 LK LR+Q+GW+L LAEA G++K+ L ++ER S P++A K++ L V S Sbjct: 43 RLKLLRKQKGWTLDVLAEAAGLTKSYLSKVERGLSVPSIAVALKLSKALQVDVEQLFSES 102 Query: 71 QSAT-PSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGV 121 + +V Q+ A S+ F + S E Sbjct: 103 RDRELITVTRAAQRAPMGSAASARTYESIAAGVAPKKLLPFVVH-PPRDYVSSAFREHEG 161 Query: 122 IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E + V G +++ E L G+ V F A + H R+ G ++ Sbjct: 162 EEMLFVHKGSVEIEFPNETIKLKTGDSVYFNALIPHRMRSVGVTQAEVLVVVS 214 >UniRef50_B9E9Z3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z3_MACCJ Length = 167 Score = 155 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 3/166 (1%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + ++++R++R +L ++AE T +S L Q+E N+S T+AT+ IA L V S F Sbjct: 2 SIGENIRKIRKERELTLKQVAELTDLSIPFLSQLETNKSDATMATIRLIADALEVHPSQF 61 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVV 126 ++ V + ++Q+ L YD F +++ G ++ + E V Sbjct: 62 FYE-HASLMDVLNAKRQSFYYEQL-AYDKGSPFIPLKVKLKPG-NTDLEYVQHDGFEFVY 118 Query: 127 VIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + G+L + +D L+ GE + + A+ H + N ++ V F + Sbjct: 119 CLKGRLTISLDNNNIELSEGESLMYDANKPHYWFNYTDEVVEFLVI 164 >UniRef50_A1T298 Transcriptional regulator, XRE family n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T298_MYCVP Length = 180 Score = 155 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 5/164 (3%) Query: 12 LKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS-PP 70 L+ +RQ+RG +L LA TG++K+ L ++ER +S P++A KI+ L V + S P Sbjct: 5 LRAVRQERGMTLDDLAADTGLTKSYLSKVERGQSVPSIAAALKISRALEVDVAQLFSDDP 64 Query: 71 QSATPSVYDPQQQA-MVITSLFPYDPQLCFEHFSIQMASGAISESTPH-EKGVIEHVVVI 128 + +T SV ++ ++ F ++ G + PH E + V Sbjct: 65 EVSTISVDRAAERGADRHHAVAARMLGKEMSPFVVR--PGRTFTTHPHPTHLGQEFIFVH 122 Query: 129 DGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 G+++L DG L G+ F A H R GE + Sbjct: 123 SGRVELSHDGRIIALEAGDCAYFDASAPHKLRQIGEDAAEVVVV 166 >UniRef50_A8HXH8 Transcriptional regulator n=25 Tax=Alphaproteobacteria RepID=A8HXH8_AZOC5 Length = 249 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 13/187 (6%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L ++ +R+Q ++S LA A G+S ML +IE + SP+++TL +A LNVP Sbjct: 61 SLEQALGIQVRSIRRQLDLTVSDLANAAGISVGMLSKIENGQISPSLSTLQSVARALNVP 120 Query: 63 FSTFISPPQSATPSVYDPQQQAMVITSLFPY------------DPQLCFEHFSIQMASGA 110 + S + Y Q +VI + E + I + Sbjct: 121 ITALFSTFEERHDCSYVKAGQGVVIERRGTKVGHQYELLGHGLGGDIVVEPYLITLT-QE 179 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 T G +E + ++ G++ L G+ + F + H + + + Sbjct: 180 AVPYTSFRHGGVEFIHMLSGEVVYRHGDRTYHLRPGDSLMFDSAAAHGPEELITRPMTYL 239 Query: 171 SLIHYPR 177 S+I Y R Sbjct: 240 SIIVYSR 246 >UniRef50_A9FKR7 DNA-binding protein n=2 Tax=Myxococcales RepID=A9FKR7_SORC5 Length = 186 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 4/176 (2%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 LA L+ +KQLR+ RG + +LA+ GV +A +E ++PT+ L + A L V Sbjct: 6 ELAGRLAKNIKQLREARGLTQQQLAKLAGVPRATWAHLESGAANPTLGVLHRAAAALQVS 65 Query: 63 FSTFISPPQSATPSVYDP----QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 +S P++ + + DP E I + G PH Sbjct: 66 IEEMLSAPRATCQLYARDALPTRSPGQALVRKLLPDPIPGMEMDRIAIPPGGRMTGVPHT 125 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 G E++ G+L L V GE L G+ F D H Y N G+Q +S++ Sbjct: 126 PGTREYLTCESGELQLVVSGERFKLGSGDVAVFRGDQRHSYHNPGKQPAVGYSVVV 181 >UniRef50_B2HYY3 Predicted transcriptional regulator n=11 Tax=Acinetobacter RepID=B2HYY3_ACIBC Length = 197 Score = 155 bits (393), Expect = 6e-37, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 12/186 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+++ ++ +++LR RG++L LA VS++ + IER E+SPT L K+A GL Sbjct: 1 MDDINIRIAHRIRELRLARGYTLDVLAARCQVSRSAISLIERGETSPTAVVLEKLANGLE 60 Query: 61 VPFSTFISPP---QSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGA 110 VP + + S+ P + + + + ++ P + +L F+ I+ + Sbjct: 61 VPLTQIFTNEAGNSSSQPLIRRNEQAEWRDPETGYIRRTVSPPNLKLPFQIVEIEFPPHS 120 Query: 111 I--SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 E+ + V + + V++G++++ + L G+ + D IY N Q Sbjct: 121 RITYETNESSRVVQQQLWVVEGKIEIQLGETSYALGQGDCLAMQLDQPVIYSNHSAQVAR 180 Query: 169 FHSLIH 174 + ++ Sbjct: 181 YILVVS 186 >UniRef50_B8IHD2 Transcriptional regulator, XRE family n=13 Tax=Alphaproteobacteria RepID=B8IHD2_METNO Length = 218 Score = 155 bits (393), Expect = 6e-37, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 9/179 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L+ L T+++LR+ SLS LAE +GV+K+++ QIERNE++PT+AT+W+++ L+V Sbjct: 32 LSGQLGKTIQRLRKAYNLSLSELAEQSGVAKSIISQIERNETNPTLATIWRLSQALDVSI 91 Query: 64 ST---------FISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 FI A + + + + + + + G +S Sbjct: 92 ERVLATGDEEPFIEKSSRADTPILVSEDGKVKLAITGWIKTVEWLQWYDVTAEPGGELDS 151 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H++G +E + V++G+ ++ V G Q + GE +R+ D H R +QT ++ Sbjct: 152 DAHQRGSVECLSVLEGEFEVEVAGAVQRVKTGETLRYRCDRPHTVRCISDQTARATMVV 210 >UniRef50_C1F2H2 Helix-turn-helix/cupin domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F2H2_ACIC5 Length = 260 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 67/180 (37%), Gaps = 12/180 (6%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 + + +K+LR ++ L L TG+S + L Q+E PT+ L +IA + S Sbjct: 25 EKRIGERIKRLRLKKSMGLVELGRHTGLSASFLSQLETGRVVPTLRNLARIAMVFSKDLS 84 Query: 65 TFISPPQSATPSVYDPQQQA-----------MVITSLFPYDPQLCFEHFSIQMAS-GAIS 112 F V+ +++ SL P + + + + Sbjct: 85 YFFETEPHTLFRVHKKKERVRLPQTGVDDPTYFFESLGYMVPDRMLDPYYAEFVPLKKGT 144 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E H E + VI G+L++ + L G+GV F A H Y+ G+ + Sbjct: 145 EVRAHVHPGFEFLYVISGELEIKHGEKLHVLEGGDGVYFDASTPHAYQCAGKTPAAVVIV 204 >UniRef50_A6DW64 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Rhodobacteraceae RepID=A6DW64_9RHOB Length = 209 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 11/174 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L +++ RQ +L L+ GVS + L QIER+ + PT+ TL +IA L+V F Sbjct: 13 ALGRRIRKRRQLMSMTLQDLSNGCGVSVSYLSQIERDNAVPTLGTLAEIAAALDVSIDHF 72 Query: 67 ISPPQSATPSVYDPQQQA--------MVITSLFPYDPQLCFEHFSIQMASGAISESTPHE 118 I+ P+ A V + + ++ + P F + + G ES + Sbjct: 73 IATPRQADS-VTRAETRPQFSISGTSIIYEQIGAEFPGHELTSFILNVPPG--YESETVQ 129 Query: 119 KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + V+DG++ V+G+ L G+ + + H + N E+ Sbjct: 130 HSGEELIFVLDGEVLQVVNGQQFLLRTGDSMHYLGQHPHSWSNVSERWARLLWT 183 >UniRef50_A1BAD5 Transcriptional regulator, XRE family n=3 Tax=Alphaproteobacteria RepID=A1BAD5_PARDP Length = 213 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 18/192 (9%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + LK+LR S +LAEA+GV + IE SSP+VA+L KI GL Sbjct: 22 MSDFD--VGARLKELRSAANMSQRQLAEASGVPHGQVSMIETGRSSPSVASLRKILGGLG 79 Query: 61 VPFSTFISPPQSATP-SVYDPQQQAMVITSLFPYDPQ---------------LCFEHFSI 104 V S F P +P + P + + + L+ + Sbjct: 80 VTMSEFFEPDLPQSPQPFFTPAELRDLTSRLYSAAQGPVGRMTLRQVGDARLHNLQILHE 139 Query: 105 QMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE 164 + GA + T E +V+ G+++L V + + L G+ FA+ H +RN + Sbjct: 140 RYEPGADTGETMLAHHGSEGGIVVAGEIELTVADQTRVLKAGDSYLFASTQPHRFRNVSD 199 Query: 165 QTVHFHSLIHYP 176 + S P Sbjct: 200 REAVVVSACTPP 211 >UniRef50_C9KMM8 Putative transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM8_9FIRM Length = 219 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L ++ L +R+ +G SL +AE TGVSK+ML IE+ ++P++ L KI +GL Sbjct: 36 MDYLVHNIAINLNHIRKAKGMSLDVVAEQTGVSKSMLAAIEKGAANPSIGVLGKIMSGLR 95 Query: 61 VPFSTFISPPQSATPSV-------YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 + + P+ V + + FP E + I + G Sbjct: 96 IELTDLTQSPRQDAYLVDVEKLTPTKDVAGEYRVWTCFPIADNHVVEIYRIDVEPGGTYR 155 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGE-WQTLNCGEGVRFAADVTHIYRNGGEQT---VHF 169 S H + E+V V++G+L L + + T+ G+ RF+++ HIYRN G++ F Sbjct: 156 SGGHGERTKEYVFVLEGELSLELANQKVYTIEAGQSFRFSSEEEHIYRNHGKEKISFASF 215 Query: 170 HSL 172 + Sbjct: 216 FVV 218 >UniRef50_A8TMW2 Putative transcriptional regulatory protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMW2_9PROT Length = 218 Score = 155 bits (392), Expect = 8e-37, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 13/187 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + ++ R R +L LA G+S + L ++ER + +V L +IA L Sbjct: 5 DQSLQRIGDAIRDRRTSRRMTLGDLAARCGLSVSFLSRVERGHAQSSVGNLIRIADALGG 64 Query: 62 PFSTFISPPQSATP----SVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASG 109 I PP + T +V+ + T + E +++++ Sbjct: 65 TIHDLIGPPDATTADHGFAVFRSAESMPRAIPATGYRWTPVSTGGAGRAIEATLLELSA- 123 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 A S T E V++G++ V L G+ + +D+ H G+ Sbjct: 124 AGSADTRFAHPGEEICFVLEGRVRFVVGERTTLLEPGDAIHLRSDIPHTAEAAGDAPARV 183 Query: 170 HSLIHYP 176 + H+P Sbjct: 184 LMMTHHP 190 >UniRef50_B6JDE1 DNA-binding protein n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JDE1_OLICO Length = 208 Score = 154 bits (391), Expect = 9e-37, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 65/189 (34%), Gaps = 19/189 (10%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++QLR+ + +L LA G++K L ++E +P + TL K+A L + Sbjct: 19 SLGRRIRQLRKMQERTLDSLATEIGLTKGYLSKVETGRQTPPLGTLSKLAKALGTDLAGL 78 Query: 67 IS-------PPQSATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQMASG 109 + SV ++ SL F Sbjct: 79 VEHGPVEPAEQDFEGVSVVRADERRNVVRGATSFGYDYQSLVQNATGKHMTPFLFTF-PS 137 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 I + E G E + V+ G ++ V E L G+ + F H R + Sbjct: 138 QILKEVFFEHGGEEMIFVLSGVVEFEVGNETYELMPGDCIYFDPRQRHRGRGKYGE-AKA 196 Query: 170 HSLIHYPRS 178 +++ P++ Sbjct: 197 LVVLYEPKN 205 >UniRef50_B2UK31 Transcriptional regulator, XRE family n=3 Tax=Burkholderiales RepID=B2UK31_RALPJ Length = 198 Score = 154 bits (391), Expect = 9e-37, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 12/181 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L+ LRQ R SL L+ GVSK+ML Q+ERN ++PTVA LW++AT L V + F Sbjct: 16 AVGAKLQALRQARKLSLDELSRHAGVSKSMLSQVERNLANPTVAVLWRLATALGVSLADF 75 Query: 67 ISPPQSATP------------SVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 +SP +A V + L P D FE + + + G + S Sbjct: 76 LSPESAADAAPAVTVIPAHSIPVIKSPDGKCELKILGPVDLAARFEWYELAIQPGGMLAS 135 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 PHE G EH+ V++G + + + + GE R+ DV H N G+ ++ Sbjct: 136 EPHELGAKEHLSVLNGTVTVQSGPSEKKVRHGETARYPVDVQHAISNAGKTVATALLVVE 195 Query: 175 Y 175 Y Sbjct: 196 Y 196 >UniRef50_Q2CEW8 Probable transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEW8_9RHOB Length = 202 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 71/183 (38%), Gaps = 12/183 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 ++ + L++ R+ +G +L +AE G+S + Q ER+ + P++++L KIA L V Sbjct: 10 QSTDSKIGAALRRYRKSQGMTLRDVAEGAGLSTGFISQAERDIAVPSLSSLRKIAQVLGV 69 Query: 62 PFSTFISPPQSATPSVYDPQQQAMV----------ITSLFPYDPQLCFEHFSIQMASGAI 111 + A + +++ + P ++ G Sbjct: 70 SLQDILPETVPAMEASRRSERRVYSAHPGSSAAMAYERISTTFPGATLSSVIMRQPPGHR 129 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S E V++G + + +DGE L+ G+ + F++ H N + V Sbjct: 130 --SELQSHDGEEIFFVLEGCVTIELDGERIILHPGDSLHFSSRRPHATWNHTTEIVLILH 187 Query: 172 LIH 174 + Sbjct: 188 VCT 190 >UniRef50_C8X7U0 Transcriptional regulator, XRE family n=8 Tax=Actinomycetales RepID=C8X7U0_NAKMY Length = 197 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 72/171 (42%), Gaps = 1/171 (0%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R + LK LR QRG +L+ ++ +TG+SK+ L ++E + PT+ L ++ VP Sbjct: 17 RQVGPRLKGLRTQRGLTLTVVSASTGISKSTLSRLETGQRRPTLELLLALSHAYRVPLDD 76 Query: 66 FISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHV 125 ++ P+ P + + T + + + I + + ++ T E + Sbjct: 77 LVAAPEEGDPRLRLKPGRVKGRTVIPLTRQSDGMQAWKIIIPTSNVTPET-RSHDGDEWI 135 Query: 126 VVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V+ G + + + L G+ F V H + + G+ S+ P Sbjct: 136 YVLSGHMRFLLGDQDMVLGPGDVAAFDTKVPHWFGSTGDAPAEILSIFGRP 186 >UniRef50_A6CYI2 DNA-binding transcriptional repressor n=7 Tax=Vibrio RepID=A6CYI2_9VIBR Length = 185 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 12/187 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+N + + QLR++RG S LAE G++ + + IE + SP+V++L KI + Sbjct: 1 MDN--HQIGKNIAQLRKERGLSQRELAEKAGITHSAISSIENAKVSPSVSSLQKIVNVFS 58 Query: 61 VPFSTFISPPQSAT---PSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + S F + Q V P+ + + + + + + + Sbjct: 59 LSLSEFFTLEQQENKEIKVVVKPEDLIEIGSENVSMKLVNNGSNKQEIGFLIEEYGPNST 118 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + ++ + E V+ G+++L +GE + GE + H + N ++ S Sbjct: 119 TGASNIKHEGEEVGTVLSGEVELEYNGETYLIKAGESYVIDTTIPHKFTNHSDKACRMIS 178 Query: 172 LIHYPRS 178 H P++ Sbjct: 179 A-HTPKA 184 >UniRef50_Q12BT0 Transcriptional regulator, XRE family n=8 Tax=Proteobacteria RepID=Q12BT0_POLSJ Length = 207 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 10/183 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L ++ ++ LR R SL LA GVS++M+ IER ESSPT L K+ATGLNVP Sbjct: 15 SLNDRIAQRVRDLRAARSLSLDALATHCGVSRSMISLIERGESSPTAVLLEKLATGLNVP 74 Query: 63 FSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAI--S 112 ++ PQ V Q V ++ P + + + A Sbjct: 75 LASLFEAPQPTKDPVARLADQPSWRDPHSGYVRRNVSPSGVASPIQIVEVSFPAKARVAY 134 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E+ E + + V V++G +++ V + L G+ + D Y N +T + + Sbjct: 135 ETGAREAQIHQQVWVLEGSIEVTVGDDQHRLGTGDCLALVLDRPVSYHNPTRKTARYAVV 194 Query: 173 IHY 175 I Sbjct: 195 ITT 197 >UniRef50_A3IAI3 Transcriptional regulator n=1 Tax=Bacillus sp. B14905 RepID=A3IAI3_9BACI Length = 188 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +R++RG SL L+ + VS +ML QIER +PT+ +IA LN S Sbjct: 2 EFGKQVNFIRKKRGMSLQELSALSKVSTSMLSQIERGGKNPTITVACQIAEALNTTLSAL 61 Query: 67 ISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAISE-STPH 117 + ++ V +++ + L P P E + + S H Sbjct: 62 LDSQETREIVVIRKEKRPVYFDESSGFQRHLLSPSFPSRGIEFVKNVIPPLSESGIFPAH 121 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQ--TLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + GV E++ V G L++ + LN G+ F A+ H + N + + +I Sbjct: 122 KSGVKEYIYVEKGSLNVELSKGAYKEQLNEGDSFFFEANTEHRFINETDHECIYFLVI 179 >UniRef50_A8GBR8 Transcriptional regulator, XRE family n=4 Tax=Proteobacteria RepID=A8GBR8_SERP5 Length = 189 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 9/185 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 +E+ L+ L LRQQ+GWSL LA+ TG+S+A L ++ER E+SPT + L K+ + Sbjct: 5 LESADLRLAQRLSDLRQQQGWSLEELAQQTGISRATLSRVERAETSPTASLLNKLCSAYG 64 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAI- 111 + S +S + P + +QQ + + + P E + +GA+ Sbjct: 65 LTMSRLLSEVEDEPPELLHREQQTVWVDRASGFHRCSVSPPAALYKAEFIECTLEAGAVI 124 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + P + H+ ++ G+L+L ++G L G+ +R+ + G + H+ Sbjct: 125 AYDAPSIHALEHHLWLLAGRLELTLEGRTFQLEPGDCLRYRLFGASKFHASGPEPAHYTL 184 Query: 172 LIHYP 176 +I P Sbjct: 185 VISRP 189 >UniRef50_A4XQJ4 Cupin 2, conserved barrel domain protein n=7 Tax=Pseudomonas aeruginosa group RepID=A4XQJ4_PSEMY Length = 188 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 68/175 (38%), Gaps = 9/175 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L++ R+ G +L+++A G++ + L Q ERN + ++++L IA L+VP + Sbjct: 5 RIGERLRRYRRAAGKTLNQVAAEAGLTASFLSQAERNLTGVSLSSLASIAKALDVPLNVL 64 Query: 67 ISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 P P + ++ L P + + G +S Sbjct: 65 FDQPAQPQPDSHVNERVRYTVGGQLLAYERLSSSFPGNSINAVKMNIPVG--YQSELIAH 122 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 +E V+ G++ ++G L G+ V F A H N + ++ Sbjct: 123 EGVEFSYVLSGRIVYTIEGRDYPLGPGDSVHFDAGKLHRLANSADTPAEVLTMTT 177 >UniRef50_B1M0W6 Transcriptional regulator, XRE family n=16 Tax=Proteobacteria RepID=B1M0W6_METRJ Length = 186 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 ++ + L+ +R + G S LA+ GV+ + + IE N +P+V L +I G+ + Sbjct: 1 MSIDVGARLRFVRARHGLSQRTLAKRAGVTNSAISLIEANRVNPSVGALKRILDGVPIGM 60 Query: 64 STFIS-PPQSATPSVYDPQQ----------QAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + F + P+ + + ++ A+ + + + GA + Sbjct: 61 AEFFALEPEPERKAFFAAEELTEIGRRAAKGAISYRQVGDSLFGRKLQILKERYEPGADT 120 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 P E +V+ G+L++ VD E + L G+ F + H +R G S Sbjct: 121 GRVPLSHEGEEGGIVLSGRLEVTVDAERRILGPGDAYSFDSRRPHRFRCVGPNPCEVVSA 180 Query: 173 IHYP 176 P Sbjct: 181 CTPP 184 >UniRef50_Q11AE7 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Chelativorans sp. BNC1 RepID=Q11AE7_MESSB Length = 229 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 75/179 (41%), Gaps = 10/179 (5%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + LK R+ + +L+ L++ T +S ++L +IE ++S P++ +L+ I + + +TF Sbjct: 27 RIGPRLKAARRLQRITLAELSKRTSISISLLSRIENDKSVPSLESLFVITNTMGIDITTF 86 Query: 67 ISPP---------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 ++ +S + + + L E F +++ A S Sbjct: 87 LTLEIPDEFLIKKESRQTVTVVNGEVEIEVQVLTLDSESALLEGFLLKLPPRA-SGGPSM 145 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E + V+ G+L++ V+ G+ + + + H YRN +Q + P Sbjct: 146 SHEGEELIYVVKGELEVTVNDSTFVAKRGDSLHYPSHFDHTYRNASDQETVVIWINTPP 204 >UniRef50_UPI00016A6284 transcriptional regulator, XRE family protein n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A6284 Length = 177 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 8/172 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + ++ LR+Q +L A + G+SK L QIER + P++A+L IA L V F+ Sbjct: 1 MGNRIRTLRRQLKLTLDVTAASAGISKPFLSQIERGRAMPSIASLVGIARALGVTIDHFV 60 Query: 68 SPPQS-------ATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 P P + A + + + ++ +G + Sbjct: 61 GAPGDAPTACRCEAPPQPGAEAIAHALAQVSHLANGTKLDAMLFRIPAGQAALEVA-SHT 119 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + V++G+++L +D L GE + + V H + N ++ + Sbjct: 120 GEEFLYVMNGEIELTLDDRTIVLKAGETAHYESTVAHAWSNAADEEAVIVWV 171 >UniRef50_Q127Q3 Transcriptional regulator, XRE family with cupin sensor domain n=1 Tax=Polaromonas sp. JS666 RepID=Q127Q3_POLSJ Length = 201 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 72/176 (40%), Gaps = 7/176 (3%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 L L+ R G +++++A+ + S++++ +IE ++SP++A L +IA L+ + Sbjct: 24 SMLGVRLRHARLVAGLTMTQVAQKSQCSESLISKIESGQASPSLAMLHRIAVTLDTNIAA 83 Query: 66 FISPPQSATPSVYDPQQQAMV------ITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 + + ++ ++ + + + + G S+ E Sbjct: 84 LTTEEAPREGPIRLSGERPVIKAGEISLERITLPKRGGLLQANIHIVPPGEASDG-LIEH 142 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E V++G L+L + E + G+ F++ H YRN G+ + Sbjct: 143 VGEEVGFVLEGSLELVLGSERHLIQAGDAFYFSSQTPHGYRNVGKVAARIFWVNTP 198 >UniRef50_B6BEY2 DNA-binding protein n=2 Tax=Rhodobacterales RepID=B6BEY2_9RHOB Length = 182 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + ++ +++ R + G SLS LA G++K+ L Q+E +P+V TLW +A L Sbjct: 1 MSAPHQMIAAAIQRERNRAGKSLSALAAQAGIAKSTLSQLEAGNGNPSVETLWALAAALG 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS-------LFPYDPQLCFEHFSIQMASGAISE 113 VP S +T + + + + L + + + + M G Sbjct: 61 VPLSLLFETEAPSTTLIRAAEGEPLESEQSDFTAVLLSRCPSNVRRDIYRVVMQPGEARR 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + PH +G +EH++V GQ+ DG+ L G+ + D H Y + F ++ Sbjct: 121 AQPHPRGTVEHMLVCSGQMRAGPDGQEDVLQPGDYYTYPGDRPHSYEAL-QADTLFLMVM 179 Query: 174 HYP 176 P Sbjct: 180 EAP 182 >UniRef50_UPI0001C31672 transcriptional regulator, XRE family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31672 Length = 196 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 12/181 (6%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + + ++ LR+ SL LAE +GVS ML Q+ER E+SPT+ +IA GL++ S Sbjct: 10 AAIGSRVRALREAMDLSLRDLAERSGVSAPMLSQVERGETSPTLQVATRIAHGLDLRLSQ 69 Query: 66 FISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISESTP- 116 + + ++ Q++ L P P E + G + Sbjct: 70 LLRLDEEGAVTIVRVQERRRGPSSVGGHRYEVLTPPLPGQRSELSRHVLTPGTATGGPGD 129 Query: 117 ---HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 HE G E ++ G++ L DG L+ G+ V F AD+ H + N G + +++ Sbjct: 130 PPVHEPGSRETALIESGRVVLHCDGTAYALDAGDTVTFDADLPHHFENPGPEEASLLAVV 189 Query: 174 H 174 Sbjct: 190 S 190 >UniRef50_Q1GDQ0 Transcriptional regulator, XRE family n=11 Tax=Rhodobacterales RepID=Q1GDQ0_SILST Length = 187 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 8/180 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L L+++R G SLSR AE TGVSKAMLGQIER ESSPT+ATLWKIA G + Sbjct: 1 MSDESITL--NLREIRAAAGLSLSRAAELTGVSKAMLGQIERGESSPTIATLWKIAKGFH 58 Query: 61 VPFSTFISP---PQSATPSVYDPQQ--QAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 +P + I P + VY + ++ + +FPYDP L E F + + G ES Sbjct: 59 LPLTALIEESTRPSGRSGEVYRTVEFPGSIAVKIVFPYDPSLGAETFHVSLKPGQSHESL 118 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 PH+ GV E V V++G++++ DG+W L G+G+RF AD H YR+ F ++ HY Sbjct: 119 PHDTGVTEEVFVLEGRMEVLRDGDWVALETGQGLRFDADQPHGYRSLSTGAA-FLNMHHY 177 >UniRef50_Q13H28 Transcriptional regulator, XRE family with Cupin sensor domain n=3 Tax=Burkholderia RepID=Q13H28_BURXL Length = 204 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LR +G S++ LA GVS + Q+ERN+++P+V L ++ L VP + + Sbjct: 19 VGARLRALRVAQGLSVNELAMRAGVSVGTVSQVERNKANPSVRILERLRQALEVPLTALL 78 Query: 68 SPPQS-----ATPSVYDPQQQAM-------VITSLFPYDPQLCFEHFSIQMASGAISEST 115 + V ++ + + L + I + +G+ SE Sbjct: 79 EEDDAVSDPITGDFVRKAAERPLFEVGKNGMQKELLSPHGDHDLQMMIIMLPAGSGSEEV 138 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 + +V++G + L V L G+ +F + V H RN +T +++ Sbjct: 139 LVGI-GEKAGLVLEGTVVLNVGDRRSELRAGDSFQFRSTVPHSVRNESNKTARLLWIMNT 197 >UniRef50_B9JMT2 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMT2_AGRRK Length = 200 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 12/185 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E L ++ LR ++ ++ +G+S + + +IE N+ SPT + K+A GL V Sbjct: 8 ERDEMDLGKRVRALRANIDMTIKEVSLRSGMSASAISKIENNQLSPTYENIIKLARGLGV 67 Query: 62 PFSTFISPPQSATPSVYDPQQQA----------MVITSLFPYDPQLCFEHFSIQMASGAI 111 S S P P + + L + + I Sbjct: 68 DISELFSDPSKQMPRGRRSFTRKGQGKIINTKQYIYEMLCTDLIGKKMMPLKATLKAHEI 127 Query: 112 SE-STPHEKGVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 + E VVV+ G+++L + E L G+ F + + H G+ Sbjct: 128 RDFGKLIAHVGEEIVVVLSGRVELRTEFYEPLVLEEGDCAYFDSTMGHACLAAGDGDAEL 187 Query: 170 HSLIH 174 + Sbjct: 188 FWVCS 192 >UniRef50_A6G914 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G914_9DELT Length = 199 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 9/186 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + + ++ RQ G SL LA+A+GVS ML ++ER +PTV ++IA L Sbjct: 1 MHDPSSSIGKNIRSRRQALGLSLDALAQASGVSSTMLSEVERARKNPTVKLAYQIARALG 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITS--------LFPYDPQLCFEHFSIQMASGAIS 112 + + + S+ Q+ ++ L E ++ +G S Sbjct: 61 CSLTDLLEDSPAVEVSIVRADQRRTLVDPDTQVVRHGLRSSLLDRNLELAWYELPAGESS 120 Query: 113 -ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E + G++E V++G +++ + G L G+ + + T YRN G++ Sbjct: 121 GEMGANLPGMVELATVVEGSVEVVLGGRSFELELGDSITYGPQSTTEYRNPGDEPAQILL 180 Query: 172 LIHYPR 177 LI + Sbjct: 181 LIDTSK 186 >UniRef50_B8EMC1 Transcriptional regulator, XRE family n=1 Tax=Methylocella silvestris BL2 RepID=B8EMC1_METSB Length = 206 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 9/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + +S L+ L Q++G S+ LA A+G+++ L + E++PT+ +WKIA L VP Sbjct: 19 DFGLSISERLRLLMQRKGRSIEALAAASGLARNKLDAVAAGEAAPTINLVWKIANALGVP 78 Query: 63 FSTFISPPQSATPSVYDPQ--------QQAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 F + ++ + V + L P+D + E + + +A ++ S Sbjct: 79 FGSLVAARKRGGNIVLRKATEKVYFSNDGRLTSRPLLPHDCKRLVEFYEMTIAPDYVARS 138 Query: 115 TPHEKGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G +E +VV+ G++ + V Q L G+ + F ADV H Y N G + ++ Sbjct: 139 EAHGAGTLESLVVVRGEVAIVVGKEASQRLKEGDAMTFEADVPHSYHNLGSTEALLYLVM 198 Query: 174 HY 175 Y Sbjct: 199 SY 200 >UniRef50_B7IJ03 DNA-binding protein n=74 Tax=Bacillus RepID=B7IJ03_BACC2 Length = 190 Score = 153 bits (387), Expect = 3e-36, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 5/179 (2%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + + L+Q+R ++ SL LA TGVSK LG+IER E++PT+A +WKI GL++ Sbjct: 10 KEVIQQVGQLLRQIRNEQKLSLEELAHKTGVSKLTLGKIERGETNPTLAVIWKITKGLSI 69 Query: 62 PFSTFISPPQSATPS-----VYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTP 116 P S + + + + QA + ++F Y + E + S +I E Sbjct: 70 PLSRLMVVGEPVAVARCGEGFAVDEGQAWHLETMFRYTKETGMEMHRACLRSNSIYEPEA 129 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H +G IE V ++ G++ + V+ + LN + ++F A+ H+Y+N E+ H + Y Sbjct: 130 HHEGAIELVTIMKGKVSIQVENDVYELNEFDSIQFEANKKHVYKNEEEEVAVLHLTMKY 188 >UniRef50_C8Q8Q5 Transcriptional regulator, XRE family n=1 Tax=Pantoea sp. At-9b RepID=C8Q8Q5_9ENTR Length = 199 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 73/183 (39%), Gaps = 6/183 (3%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + L+ +R+ RG + +AE GVSK+ + ++ERN + ++ATL K+ + + Sbjct: 15 NTPDFNVGIRLRAVRKARGMRIEEVAEKVGVSKSFISRLERNVTQASIATLLKVCEVVGI 74 Query: 62 PFSTFISPPQSATPSVYD----PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 + PP ++ + L ++ S + P+ Sbjct: 75 TPAKLFDPPSTSFVPAGQGTPISLGGEKMREYLISGGVNDDMMVLYSEIDPLGGSGAEPY 134 Query: 118 E-KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG-EQTVHFHSLIHY 175 + V V+ G+L++ V+ + L G+ + F + H + N +Q +I Sbjct: 135 TLNAAADMVHVLSGELEIVVEEQRYLLAKGDTLTFKPSLPHTWHNISPDQMCTAIWVIVP 194 Query: 176 PRS 178 P S Sbjct: 195 PPS 197 >UniRef50_Q48IV6 DNA-binding protein n=16 Tax=Proteobacteria RepID=Q48IV6_PSE14 Length = 203 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 9/176 (5%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI- 67 LK +R+ S LA +GV+ A + IE+N SP++++L K+ G+ + + F Sbjct: 25 GARLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSISSLKKLLEGIPMTLADFFT 84 Query: 68 -SPPQSATPSVYDPQQQAMVITS------LFPYDPQLCFEHFSIQMASGAISESTPHEK- 119 P V+ Q + + + P Q A GA S P Sbjct: 85 FDQPPGQDQYVFRAGDQPDLGRNGVRLLLVGATLPSRQMRFLREQYAPGADSGEEPIVHS 144 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E +V G ++L +DG+ L G+G F + H +RN G+ S Sbjct: 145 EGEECGLVTRGTVELTIDGQVNILGPGDGYYFPTTLPHRFRNIGQDEAEIISSNTP 200 >UniRef50_A0RIX6 Transcriptional regulator, MerR family n=71 Tax=Bacillus RepID=A0RIX6_BACAH Length = 237 Score = 152 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 85/169 (50%), Gaps = 4/169 (2%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + + ++++RQ+RG +++++ E TG+SK + Q+E N++SP+++TL I+ LNVP Sbjct: 58 NIGSAIREIRQRRGITIAQICEGTGLSKGFMSQVENNKTSPSISTLETISNFLNVPLPYL 117 Query: 67 ISPPQSATPSVYDPQQQAMVI----TSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 + + V +++ V + Q +++ +G E+TP+ Sbjct: 118 LLEQKDRLKVVKKVERKYSVYGKDEQRIEHVAEQGGLRLNLVEIPAGFPKENTPNAHEGE 177 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E +V+ G+L++ + + G+ + A V HI RN GE+T Sbjct: 178 ECHLVLRGKLEVQHGEDVAIVEEGDSFSWNACVPHIVRNIGEETALLLI 226 >UniRef50_B9JGR0 Transcriptional regulator protein n=12 Tax=Rhizobiaceae RepID=B9JGR0_AGRRK Length = 272 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 8/176 (4%) Query: 8 LSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI 67 + L+ LR G +L ++A GV+ + L +ER + TL +A S Sbjct: 96 IGRKLRALRHAAGKTLDQVAADMGVTSSTLSTLERTSQGVSFKTLHDLADYYGTTVSRLS 155 Query: 68 SPPQSATPSVYDPQQQAMVITSLFPY------DPQLCFEHFSIQMASGAISESTPHEKGV 121 + P + + + + + + +A GA SE + Sbjct: 156 GEEREDVPVLIRSGEWRAWPETTPGVTVQLLAEGRTMMDCHRFVLAPGATSEG-AYRHDG 214 Query: 122 IEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 E + ++ G+L+L +D ++ L G+ + F + H +RN + + P Sbjct: 215 EEFIHILAGRLELVLDNDQFFDLMPGDSLYFESRRDHSWRNRHDGETILLWINTPP 270 >UniRef50_A8ZUX9 Transcriptional regulator, XRE family n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUX9_DESOH Length = 433 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 12/188 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + + L +K+LR ++G S LA GV+ + + Q+E N+ P+V L K++ L+ Sbjct: 246 MRSGSLDLGLRIKELRTKKGMSQVALARGIGVTPSTISQVENNQIFPSVPALIKMSEILS 305 Query: 61 VPFSTFISPPQSATPSVYDPQ------------QQAMVITSLFPYDPQLCFEHFSIQMAS 108 V F + P V + ++ + L P D + + I++ Sbjct: 306 VDVGYFFQTGAGSAPRVVFSEFEAMPSPVPGMARRLISCRRLMPEDMEAQCVPYIIEIQP 365 Query: 109 GAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVH 168 GA+ + E +++G+L + + Q L G+ V AA+V + N G+ Sbjct: 366 GAVLDGHFFSLKGEETGFLMEGELHMTLGHGAQPLQTGDLVYLAAEVPSQWENRGKLPAR 425 Query: 169 FHSLIHYP 176 + P Sbjct: 426 LLWITATP 433 >UniRef50_B6JGR2 Transcriptional regulator, XRE family with cupin sensor n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JGR2_OLICO Length = 189 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 12/182 (6%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + L+T K+LR+ R WSL A+ TGVSK+ML +IER +SPT L K+A G + Sbjct: 1 MTAVLATRFKELREGRRWSLREAADKTGVSKSMLSKIERGLTSPTATVLGKLAEGFGISI 60 Query: 64 STFISPPQSATPSVYDPQQQ---------AMVITSLFP-YDPQLCFEHFSIQMASGAISE 113 S + + + V P+ + SL P + + S Sbjct: 61 SQLVGGEELSGDVVVMPRAEQAVFRVPTTGFERRSLSPLASQNSGVDFVVNVLPPLQSSG 120 Query: 114 -STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE-QTVHFHS 171 PH GV E + V G+L L + E L G+ + + A V+H + N + + F Sbjct: 121 TFPPHRAGVEETLTVASGRLGLQLGDEKYDLKAGDAIFYRAHVSHRFDNPSDSEPAVFFI 180 Query: 172 LI 173 +I Sbjct: 181 VI 182 >UniRef50_A1JM20 Putative DNA-binding protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JM20_YERE8 Length = 153 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 80/151 (52%), Positives = 98/151 (64%), Gaps = 8/151 (5%) Query: 36 MLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYD--------PQQQAMVI 87 MLGQIER ESSPTVATLWKIA+GLNV FS F+ P + + +++ + M + Sbjct: 1 MLGQIERGESSPTVATLWKIASGLNVSFSQFLETPPAQSAALHRHGLLTTFNSETSGMRV 60 Query: 88 TSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGE 147 LFPYD L + F I + G SESTPHE GVIEHV+VI+G+L L VDG +TL GE Sbjct: 61 VPLFPYDATLRMDMFVIDLEPGGCSESTPHEAGVIEHVIVIEGELILTVDGVTRTLTTGE 120 Query: 148 GVRFAADVTHIYRNGGEQTVHFHSLIHYPRS 178 +RFAAD H YRN +V FH LIHYP + Sbjct: 121 ALRFAADCPHGYRNESGHSVRFHDLIHYPHT 151 >UniRef50_C9NG53 Transcriptional regulator, XRE family n=3 Tax=Actinomycetales RepID=C9NG53_9ACTO Length = 194 Score = 151 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 8/183 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + R L+ ++ R + G SL L VSK L +E+ + +P ATL ++A L + Sbjct: 5 DEALRTLARNVRAARTRAGLSLDELGRRAKVSKGALVGLEKAQGNPNFATLVRLADTLGI 64 Query: 62 PFSTFISPPQSATPSVY--------DPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 S + P V ++ + E + ++ G Sbjct: 65 SVSALLEGPAEGRVRVVSADAVMPLWAGERGSEARLMLTTSGPAPVEVWRWKLEPGEEYP 124 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 S PH+ GV+E V V G++ L VDG ++ G+ F D TH YR G T H + Sbjct: 125 SHPHQAGVVETVSVTSGRMTLVVDGTEHSVEAGQTATFDGDATHAYRGSGSGTCHLIMTV 184 Query: 174 HYP 176 H P Sbjct: 185 HIP 187 >UniRef50_B0UAQ2 Transcriptional regulator, XRE family n=3 Tax=Rhizobiales RepID=B0UAQ2_METS4 Length = 207 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 10/167 (5%) Query: 20 GWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFI-SPPQSATPSVY 78 G SL +A TG+S L Q+ER SSP++ L ++A L V ++ + P A P V Sbjct: 38 GLSLKAIAARTGLSIGFLSQVERGLSSPSLRVLTQLADLLEVGLASLFGAAPGPAEPIVT 97 Query: 79 DPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDG 130 P ++ + L F +++A GA + G E +V++G Sbjct: 98 RPHERAELTLWRSGIAKQLLTRPGADGHLSLFLMRLAPGASTGDEALTHGGEEAGLVLEG 157 Query: 131 QLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGE-QTVHFHSLIHYP 176 +L L V+ +L G+ RFA+ H Y N E + P Sbjct: 158 RLALWVEDAALSLAAGDSFRFASRRPHRYGNPSETDEAVVLWVNAVP 204 >UniRef50_Q31LK1 Transcriptional regulator, XRE family with cupin sensor domain n=4 Tax=Bacteria RepID=Q31LK1_SYNE7 Length = 230 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 14/184 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L R+L T+++LRQ+ +++ +++ G+S+ ML +IE ++S ++ TL ++ + L V Sbjct: 21 LCRYLGNTIRELRQRHDLTIAEVSQKAGISRGMLSKIENAQTSASLETLERLVSVLGVSL 80 Query: 64 STFISP-----------PQSATPSVYDPQQQAMVITSLFPYDP--QLCFEHFSIQMASGA 110 S P+ V + L DP Q CFE F I + + Sbjct: 81 SALFKGYEASSEQVFLVPEGTAKEVVRRGTRNGHTYQLLASDPTAQFCFESFLITLHERS 140 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 E E + V++G++ + L G+ + F +D+ H + + F Sbjct: 141 E-PFAAFEHPGFESIYVLEGKMQYRHGSQSYLLKAGDALTFQSDIPHGPELLIDLPIRFL 199 Query: 171 SLIH 174 + + Sbjct: 200 ATVF 203 >UniRef50_Q5QYK8 Transcriptional regulator, Cro/CI family n=1 Tax=Idiomarina loihiensis RepID=Q5QYK8_IDILO Length = 191 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 8/179 (4%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + ++ + R+Q G SL LA+ +SK ML QIE+ ++P++ L K+A L V Sbjct: 9 INEAIAKRVYTFRKQYGMSLDELAKNAEISKGMLVQIEKGRANPSIGILCKLANALAVSV 68 Query: 64 STFISPPQSATPSVYDP--------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + ++ ++ P V L + E + M S Sbjct: 69 ADIVAVSDDPKVTIRQPQDIPTLWNGDHGGVARLLAGSKGTIMIELWRWSMFPKEQFVSE 128 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 H KG IE + V G LD+ V+ E TL+ G+ + DV H Y+N + VHF ++ Sbjct: 129 AHSKGTIELIHVEGGCLDVLVNEETYTLSAGDSMTAEMDVAHTYQNSTNEPVHFTMTVY 187 >UniRef50_Q3A4K5 Transcriptional regulator, XRE family n=2 Tax=Desulfuromonadales RepID=Q3A4K5_PELCD Length = 188 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 10/183 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 L + LK +R + ++ ++E VS M+ +IER ++P+V L ++ + Sbjct: 2 QLKNLIGKKLKAIRLKNNLTIQVVSERAHVSANMISRIERGLTTPSVEILLRLGSVFEKS 61 Query: 63 FSTFISPPQSATPSVYDP----------QQQAMVITSLFPYDPQLCFEHFSIQMASGAIS 112 + F+ ++ V+ Q + S F F + S Sbjct: 62 INYFVEEVENTHEIVHSRPGERSCTVFDDNQNLRTESFTAGLRDPQFTSFYCVIKPHGTS 121 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E + V+ G+L++ V GE + GE + F + + H + N E H + Sbjct: 122 GDADMFHPGDELLYVLKGRLEMTVAGETFLIEEGESLSFKSHLPHRWTNVSETETHVMWV 181 Query: 173 IHY 175 + Sbjct: 182 LSP 184 >UniRef50_A3DCV9 Transcriptional regulator n=3 Tax=Clostridium thermocellum RepID=A3DCV9_CLOTH Length = 183 Score = 151 bits (383), Expect = 9e-36, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 9/182 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + +S +K+LR+ G S LA G+ + E V+ L+KIA N Sbjct: 1 MSEQIKQISKRIKELREISGISAETLARELGIDSKTYTEYESGNVDIPVSLLFKIAGRFN 60 Query: 61 VPFSTFI--SPPQSATPSVYDPQ-------QQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 V S + P+ T V ++ SL E F + + + Sbjct: 61 VELSEILTGEAPKLHTYCVVRKDKGVSVERRKDYKYQSLAYNFANKKIEPFLVTVEPDSN 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 SE + E VI+G L + ++G LN G+ + F + H + + F + Sbjct: 121 SEVNYNSHPGQEFNYVIEGVLKVIINGHEIILNEGDSLFFDSGAKHGMKAMNGKPAKFLA 180 Query: 172 LI 173 +I Sbjct: 181 II 182 >UniRef50_D0LSP1 Transcriptional regulator, XRE family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LSP1_HALO1 Length = 187 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 6/177 (3%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + L+ +KQLR+ RG S +++A+ G+ + +ER + +PT++ L + A L V Sbjct: 8 DTGAHLAHNVKQLREARGMSQAQIAKLAGIPRPTWSTLERGDGNPTLSVLLRAAAALQVS 67 Query: 63 FSTFISPPQSATPSVYD-----PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 ++PP++A ++ + + +L P DP + + A GA PH Sbjct: 68 LEELVAPPRAAARVYRKGSLTVRRRGRVTVENLLP-DPVPGLQLERMHFAPGAGMSGVPH 126 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 G E++ + G++ L G+ TL+ G+ V F D H YRN G Q S++ Sbjct: 127 TAGTREYLCCMQGEVQLSAAGDSWTLSEGDVVVFRGDQKHGYRNPGAQPSLAFSVVV 183 >UniRef50_B4RY23 Transcriptional regulator, HTH_3 family protein n=2 Tax=Alteromonas macleodii RepID=B4RY23_ALTMD Length = 208 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 73/177 (41%), Positives = 104/177 (58%), Gaps = 5/177 (2%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 +++ ++ L+ +R RG SL + A+ TGVSKAMLGQIER ESSPT+ATLWKIATGL F Sbjct: 32 ISKSIAQHLQSVRTGRGLSLDKTAKLTGVSKAMLGQIERGESSPTIATLWKIATGLACSF 91 Query: 64 STFISPPQSATPSVYDPQ----QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 S+F+S ++A S + + I +LFP++ FE F + + S+ H+ Sbjct: 92 SSFLSGDETAPTSQHADDKFANDPNVTIKTLFPFNAVTQFEMFELCLKDFHEQHSSAHQI 151 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 GV EH+ V+ G+L + DG+WQ E AD H YR+ +T F +IHYP Sbjct: 152 GVTEHIHVLQGKLGVLQDGQWQAYQAQEQCILHADQPHGYRDEVGET-RFVVVIHYP 207 >UniRef50_A0JT75 Transcriptional regulator, XRE family with cupin sensor n=5 Tax=Actinobacteria (class) RepID=A0JT75_ARTS2 Length = 191 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 78/181 (43%), Gaps = 9/181 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 N+ + + ++ RQ + ++ ++A+ATG++K L ++ER+ +SP+VA+L + L++ Sbjct: 9 SNIPVAIGSRIRAARQSQRLTIEQVADATGLTKGFLSRVERDLTSPSVASLVTLCQVLSI 68 Query: 62 PFSTFISPPQ------SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + P+ P + + +I L + + + ES Sbjct: 69 SIGDLFAAPETHLTKKDEGPRISLGGEG--IIERLLTARSERRVQIIQAVIEPRGRGESE 126 Query: 116 PHEKG-VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 + ++ + VI G++ L + E L+ G+ V F H + N + V ++ Sbjct: 127 LYAVDCDVDVLHVIRGRIRLILTNEEYELSTGDTVTFPGREPHTWVNPTDDAVEVLWVLV 186 Query: 175 Y 175 Sbjct: 187 P 187 >UniRef50_Q1IM53 Transcriptional regulator, XRE family with cupin sensor domain n=3 Tax=Bacteria RepID=Q1IM53_ACIBL Length = 201 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 13/179 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L+ LR ++ L L + TG+S A+L ++ER + PT+ TL +IA +V F Sbjct: 20 RIGEKLRALRLKKKLGLVELGKHTGLSPALLSKLERGKLFPTLPTLLRIALVFSVGLDYF 79 Query: 67 ISPPQSATPS-VYDPQQQAMVITSLFPYDPQLCFEHFSIQ-MASG-----AISESTP--- 116 + V ++ D FE + A E P Sbjct: 80 FADESRRHVVSVVRKDERLRFPERPNTRDVAYYFESLDFAALEPKLNAFLADFEHVPAET 139 Query: 117 ---HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 H+ E + + G+L+L + G L+ G+ + F + V H YRN ++ + Sbjct: 140 LRLHQHQGFEFLHTLAGKLELVIGGIPYELSQGDSIYFDSSVPHTYRNAQKKPCSALVV 198 >UniRef50_A0L5V7 Transcriptional regulator, XRE family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5V7_MAGSM Length = 183 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS 68 ++QLR QR + LA+ + +A L +E+++++P++A ++KIA L + + Sbjct: 7 GMRIRQLRSQRKLTQQALADMAEIPRATLATVEKDDANPSLAVVYKIARALGLSIDQLLV 66 Query: 69 PPQSATPSVYDPQ----QQAMVITSLFPYDPQLCFEHF--SIQMASGAISESTPHEKGVI 122 + V Q + A P F + +GA+ E PH G Sbjct: 67 TERERIQVVPADQMRWVETADGRYRAVVVSPGNALHFFQQIFSLQAGAVYEGRPHPPGSE 126 Query: 123 EHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 E++ V++G L+L + GE + L G+ RF +V H YRN EQTV I Sbjct: 127 EYLHVLEGALELELAGECKRLVKGDSARFGGNVLHQYRNPTEQTVRCLVTI 177 >UniRef50_A6UF59 Transcriptional regulator, XRE family n=7 Tax=Rhizobiaceae RepID=A6UF59_SINMW Length = 197 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 80/184 (43%), Gaps = 10/184 (5%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 L + ++ LR + +L LA GVS+AM+ +IER E+SPT L ++ + L Sbjct: 11 SQLDEVVGMRVRALRAAQDLTLDDLANRAGVSRAMISRIERGEASPTAQLLARLCSALGT 70 Query: 62 PFSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAI-- 111 S + S + Q Q + S+ P + ++ GA Sbjct: 71 TLSALFASGVSEASPLARRQDQRLWRDPESGYLRRSVSPEGVGSPIDIVEVEFPPGARVV 130 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 E P ++G+ +H+ + G+L+L ++ Q L G+ + + HI+ N E+ H+ Sbjct: 131 FERQPMDRGITQHLWLFSGRLELTMESGQQLLEPGDCLFMGLEEAHIFHNPYEEAAHYAI 190 Query: 172 LIHY 175 ++ Sbjct: 191 VLCR 194 >UniRef50_C9ZEI0 Putative DNA-binding protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9ZEI0_STRSW Length = 204 Score = 150 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 9/181 (4%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 ++ ++ LR+QRG SL+RLA G++K L +E+ +PTV TL+ IAT L VP + Sbjct: 6 NAVVARNVRLLREQRGLSLARLAREAGLAKQTLSNLEQGTGNPTVDTLFSIATALGVPVT 65 Query: 65 TFISPPQ-----SATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMAS---GAISESTP 116 ++ + V + + + +L E++ +++ GA P Sbjct: 66 RLVAEREQVMTVQRGADVVWKEHEGLETRALDHVYGSGVIENYLVRVGPDRDGAGRPIEP 125 Query: 117 HEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 H G +EH+ VI G++ + L+ G+ VR+ D H+Y++ + H ++ P Sbjct: 126 HPVGTLEHLYVISGRVRVGPAESPVELDAGDFVRYPGDRPHVYQSL-DGESLVHIVVSVP 184 Query: 177 R 177 R Sbjct: 185 R 185 >UniRef50_C1SGH2 Predicted transcriptional regulator n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGH2_9BACT Length = 196 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 12/183 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M++ + ++++R +RG +L +A TG SKA++ QIE N P + TL KIA LN Sbjct: 1 MQDTEVKIGERVRKIRNERGLTLQDVANFTGFSKALISQIENNIVMPPINTLSKIAKVLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQ-----------AMVITSLFPYDPQLCFEHFSIQMASG 109 V + F + + Q + L + + + Sbjct: 61 VKMTYFFEEEINQKDYYVVKKDQKKFIFREGVKHGYMYEELAKVKSFDYLDLLLVTIKPD 120 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 E E++ V++G + + + + L G+ + F + + H +QT Sbjct: 121 KRDE-KLFSHEGYEYMFVVEGGMSMKMGNDVIDLYAGDSIAFNSKIPHAAVPLDDQTALV 179 Query: 170 HSL 172 Sbjct: 180 LCA 182 >UniRef50_A6UEQ1 Transcriptional regulator, XRE family n=2 Tax=Rhizobiaceae RepID=A6UEQ1_SINMW Length = 209 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 12/183 (6%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 R ++ TL+QLRQ+ G +L+ LA ++ + L +IE + SPT T+ +A GL + Sbjct: 17 RRSIAETLRQLRQENGLTLNELARRCALAPSTLSKIENGQMSPTYDTILSLAEGLGADVA 76 Query: 65 TFISPPQSATPSVYDPQQQA----------MVITSLFPYDPQLCFEHFSIQMASGAISES 114 + Q+ T S +A L F + + +IS Sbjct: 77 ELFARRQTTTVSGRRTINRAGDGVAHNTDQYDYQMLCTELAHKQFVPLKAIIKANSISRF 136 Query: 115 TPH-EKGVIEHVVVIDGQLDLCVDG-EWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E V V+ G+++L L+ G+ F + + H E+ + Sbjct: 137 GGMLSHSGEEFVYVLSGEIELHTQFYAPTRLHTGDSCYFDSTMGHALLKASEEDAEVLWV 196 Query: 173 IHY 175 Sbjct: 197 CSR 199 >UniRef50_A6X8F8 Cupin 2 conserved barrel domain protein n=2 Tax=Ochrobactrum RepID=A6X8F8_OCHA4 Length = 202 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N A + ++ RQ G +L L+E +G+S L QIER SPTV TL+ IA L++ Sbjct: 18 NDAGDIGARIRLRRQTLGLTLGYLSEVSGLSTGALSQIERGLVSPTVRTLYTIAEVLSMS 77 Query: 63 FSTF-----ISPPQSATPSVYDPQQQ------AMVITSLFPYDPQLCFEHFSIQMASGAI 111 + + A P V +Q VI + + F++++ G Sbjct: 78 PAQLIDPQGFAAAARANPYVLRAGEQPEVLNAGGVIKHRASPELIETMKSFAVRIIPGGS 137 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + E VI G L ++ L+ G+G + H + N GE Sbjct: 138 SGEECYTHSGEELGYVISGSFTLQIEDAQYLLSAGDGFALPSTTRHRFFNNGEAEAFVLW 197 Query: 172 LIHY 175 + Sbjct: 198 VNKP 201 >UniRef50_B2PVG1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PVG1_PROST Length = 185 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 5/181 (2%) Query: 1 MEN-LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGL 59 M+ + + ++ LRQ R SL+ LA +G+SKA L ++E +S+P V TL IA L Sbjct: 1 MDKKINIKIGQKVRLLRQARNLSLNELARLSGISKAALSKLESGDSNPRVDTLEAIAIAL 60 Query: 60 NVPFSTFISPPQSATPSVYD--PQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 P S + A P PQQ F + E + + M GAI S H Sbjct: 61 RFPLSDLFTLQHEAYPYFVKSAPQQGDYSQQFKFRINMGNISEIWQLNMKRGAIINSPAH 120 Query: 118 EKGVIEHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 G EH+++ G L L + D + L G+ F+ D H Y E ++ ++ Y Sbjct: 121 MSGTHEHIMLHTGSLMLRLKDEQTVLLEEGDFYAFSCDFPHSYLCM-EGELNATVVMTYS 179 Query: 177 R 177 Sbjct: 180 H 180 >UniRef50_B7IX94 DNA-binding protein n=105 Tax=Bacillales RepID=B7IX94_BACC2 Length = 184 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 10/184 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N+ + + R+ G + RLAE ++ +ML QIE+ ++P++ TL I+ LN Sbjct: 1 MNNIN--VGQKIMAFRKGAGLTSKRLAELADITPSMLSQIEKGITNPSLQTLKLISVALN 58 Query: 61 VPFSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGAIS 112 +P F S V Q+ V L + E + + S Sbjct: 59 IPLFNFFLEDTSTEELVVRANQRKKITFPESGNVSYELLSPNLDGSLELALMNLLPQTAS 118 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 P E +++GQ+ L ++ E LN G+ V+ H + N V Sbjct: 119 SMEPVAHKGEEIAFIMEGQVKLYLNDEVLLLNTGDSVKIPPYAKHKWENTSLNKVTVIFG 178 Query: 173 IHYP 176 + P Sbjct: 179 VTPP 182 >UniRef50_Q4ZU57 Helix-turn-helix motif n=7 Tax=Gammaproteobacteria RepID=Q4ZU57_PSEU2 Length = 201 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 71/185 (38%), Gaps = 14/185 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L ++L +K+ RQ + L+ +A G+S+ ML +IE + S ++ L ++ L +P Sbjct: 13 LEQYLGIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPM 72 Query: 64 STFISP-----------PQSATPSVYDPQQQAMVITSLF--PYDPQLCFEHFSIQMASGA 110 S S V + L P+ FE + + M A Sbjct: 73 SKLFSQYDQQGSSALLVKADEGLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMD-DA 131 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 E E + +++G+L + + G+ + F D+ H + + Sbjct: 132 SEEFPTFSHPGTEFLHLLEGELIYRHGNQLYPMQAGDSLTFDGDIPHGPEQLVQVPIKLL 191 Query: 171 SLIHY 175 S+++Y Sbjct: 192 SIMNY 196 >UniRef50_A9CWV6 Transcriptional regulator, XRE family protein n=2 Tax=Alphaproteobacteria RepID=A9CWV6_9RHIZ Length = 182 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 9/182 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M+ L L+ LKQLR RGWSL +LA+ +GVS++ L +IE E SPT TL +++ Sbjct: 1 MDTLNDRLADRLKQLRATRGWSLQQLADISGVSRSALSRIETGEVSPTAETLGAMSSAFQ 60 Query: 61 VPFSTFISPPQSATPSVYDPQQQ--------AMVITSLFPYDPQLCFEHFSIQMASGA-I 111 + S ++P ++ + ++Q + P L E + I Sbjct: 61 MTISQLLAPVEAPFQPLVRAEEQSTWRDDENGFSRRVVSPPAGGLSAEVIRCTLEPYQII 120 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 S + P + G H+V+++G L + + E L G+ +R+ ++ G + + Sbjct: 121 SYAGPSKPGHEHHLVMLEGALTVTLGEEMHQLAAGDCLRYQLYGPSRFQTGVDAACYLIM 180 Query: 172 LI 173 L+ Sbjct: 181 LV 182 >UniRef50_C0Z4P6 Putative DNA-binding protein n=2 Tax=Bacillales RepID=C0Z4P6_BREBN Length = 189 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 7/180 (3%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + + + LK++R+++ SL L+E +GVSK LG IER E++PT+ LWKI+ L++ Sbjct: 9 KQVVLQVGGVLKKIRKEKHLSLEDLSELSGVSKLTLGNIERGETNPTIGVLWKISKCLSI 68 Query: 62 PFSTFISPP------QSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 P S ++ + VI +F + E + + Sbjct: 69 PLLALFSTENSVNLSRAGKGLRIAGDNKDWVIEPIF-QNVSNEIETCRAYLQPNSSYYPE 127 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 H E V+ G L + V+ E LN + + F AD TH Y N ++ V H ++ Y Sbjct: 128 KHHHNTTEIATVMSGTLSIHVNNESYVLNQYDSISFCADGTHSYINQSDELVVLHIILKY 187 >UniRef50_B2S813 Transcriptional regulator, Cro/CI family n=34 Tax=Alphaproteobacteria RepID=B2S813_BRUA1 Length = 650 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 6/176 (3%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M N + + L +LR++RG +L LAE + +S+A + +E +P + TLW +A L Sbjct: 1 MSN-SAEIGMNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALG 59 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKG 120 + F + + + + + E F + + + A + H G Sbjct: 60 IEFGELVGARNDVEVV----EADGISVRLIDRQTRPRTVEAFLLDLPANAKRHADAHVHG 115 Query: 121 VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V E+VVV+ G + + L+ G+ +FAADV HIY + G + I YP Sbjct: 116 VSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSS-GAEPSRAIVTIIYP 170 >UniRef50_D1RT89 Transcriptional regulatory protein n=3 Tax=Enterobacteriaceae RepID=D1RT89_SEROD Length = 462 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 77/181 (42%), Gaps = 8/181 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ++N+ + + ++ R+ R WSLS LAE GVS+AM+ +IER +SSPT L +++ Sbjct: 278 LDNINQRIGARIRIEREARHWSLSDLAERAGVSRAMVHKIERGDSSPTAMLLARLSGAFG 337 Query: 61 VPFSTFISPPQSATPSVYDPQQQAMV-------ITSLFPYDPQLCFEHFSIQMASGAISE 113 + S I+ ++ + + Q + + + + +++ +GA Sbjct: 338 LSMSKLIARAETQEGRLLRREDQPVWVDPESGYVRRHVSPRSDIPLDLVRVELPAGAEIP 397 Query: 114 STPHEKGV-IEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 + + ++ G+L + G+ + +++N ++ + + Sbjct: 398 MPASVYAFKRQLIWLLSGELVFLEGENRHEMAAGDCLELGPPADCVFKNESDEPCIYLVV 457 Query: 173 I 173 + Sbjct: 458 V 458 >UniRef50_UPI00005895B5 truncated transcriptional regulator n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=UPI00005895B5 Length = 161 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 7/160 (4%) Query: 23 LSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSV----- 77 + +L++ TGVS + L +IE+ + P++ T+WKI+ GL + FS+ +S +S V Sbjct: 1 MEKLSKLTGVSTSSLNEIEKGNTIPSINTVWKISNGLKLSFSSLMSEAESDYVQVNKEDV 60 Query: 78 --YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLC 135 + FP++ FE F +++ GA +S PH G E ++++DGQL++ Sbjct: 61 VPVTEDDGKYRVYPYFPFEKSKSFEFFYVELDPGATLDSEPHLSGSEESIIIVDGQLEMH 120 Query: 136 VDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 ++ E L G+ +RF +D+TH Y N GE +I Y Sbjct: 121 LENEVIDLGKGDALRFKSDITHSYTNHGEDMTLISMVIDY 160 >UniRef50_A6T0N3 Transcriptional regulator, Cro/CI family n=2 Tax=Janthinobacterium sp. Marseille RepID=A6T0N3_JANMA Length = 221 Score = 149 bits (377), Expect = 5e-35, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 19/193 (9%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 + ++ L + +LR RG++ RLA TG +K L +IE ++ P + TL KIA L+ Sbjct: 13 LSDIELRLGRRVSELRTARGYTQDRLASETGFTKGYLSKIENSKIIPPIGTLIKIAQALH 72 Query: 61 VPFSTFI---SPPQSATPSVYDPQQQ----------AMVITSLFPYDPQLCFEHFSIQMA 107 + + + +S + ++ +L E F + Sbjct: 73 TDLAELLGTETAERSDAICIVRSWERESVVHGEEAFGYDYVALANKRRHKHMEPFIMVF- 131 Query: 108 SGAISESTPHEKGVIEHVVVIDGQLDLC--VDGEWQ--TLNCGEGVRFAADVTHIYRNGG 163 ++ + E + V DG+++ +DG Q L+ G+ + F +++ H R+ Sbjct: 132 PNEMAHEMRFDHEGEEFLFVTDGKVEFSFMIDGREQQWILSAGDSLYFDSNIPHRGRSI- 190 Query: 164 EQTVHFHSLIHYP 176 + +I P Sbjct: 191 KGESKALVVIFRP 203 >UniRef50_C5PR45 XRE family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C5PR45_9SPHI Length = 205 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 75/185 (40%), Gaps = 16/185 (8%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 +N +S+ +K++R+ +G ++ LA+ GVSK ++ Q+E N + P++ L I L + Sbjct: 15 DNTIFKISSRIKEIRKGKGITIQDLADRAGVSKGLISQVENNRTVPSLLVLINIIGALEI 74 Query: 62 PFSTF---ISPPQSATPSVYDPQQQ----------AMVITSLFPYD-PQLCFEHFSIQMA 107 + F + P + ++Q + +F + +++ Sbjct: 75 DLTEFFKGFTSDGDLGPVIVRRKEQYESFEKEHALGFMYKRIFTTSIVNSTMDIVLLELE 134 Query: 108 SGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTV 167 A E+ ++ G+++ + E L G+ + F ++H RN G Q Sbjct: 135 PDANRPMV--TTEAFEYKYILAGEVEYIFENEVVHLKEGDSILFDGRLSHSPRNSGTQKA 192 Query: 168 HFHSL 172 + Sbjct: 193 SMLIV 197 >UniRef50_C2LK61 Transcriptional regulator n=4 Tax=Enterobacteriaceae RepID=C2LK61_PROMI Length = 192 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 4/175 (2%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 +L +KQLRQ R SL+ L+ +G+SKA L ++E +S+P + TL IA L P Sbjct: 10 NEYLGNKVKQLRQSRNLSLNELSRKSGISKAALSKLESGDSNPRIDTLEAIAIALGFPLG 69 Query: 65 TFISPPQSATPSV--YDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVI 122 S + P + + P F E + I+M GAI S H G Sbjct: 70 DLFSFTREEYPRLERHKPIVGDYAQEFKFRIGIGNITEIWHIEMKHGAIINSPAHADGTQ 129 Query: 123 EHVVVIDGQLDLCV-DGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 EH++V G+L + + E L G+ F + H Y E + ++ P Sbjct: 130 EHIMVYSGKLMMRFANDETVLLETGDFYAFHGNAPHSYICV-EGHMRASVIMSSP 183 >UniRef50_B1HMP7 Transcriptional regulator n=2 Tax=Bacillaceae RepID=B1HMP7_LYSSC Length = 194 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 4/176 (2%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 +L + L+++R+ + SL LA + VSK LG+IER E++PTV LWKI GL++P Sbjct: 17 DLFSQVGMNLREIRKNKRMSLEELASVSNVSKLTLGKIERGETNPTVNILWKICRGLHIP 76 Query: 63 FSTFISPPQSATPSVYDPQQQ---AMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEK 119 + +S ++ + + Q + P E + ++ + S H Sbjct: 77 LISLLSFEENVEVHRFGSEYQFAGHNNDWFVEPLFKTNGTEWYRGRLDPNSEY-SECHLA 135 Query: 120 GVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 G E V+V++GQL+L V + LN + ++F + H Y N ++ +H + Y Sbjct: 136 GSEEVVLVLNGQLELKVGEKTHLLNQWDVIKFKGEELHTYINHSDEKIHLMLSLTY 191 >UniRef50_D1BGL3 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BGL3_SANKS Length = 204 Score = 149 bits (376), Expect = 6e-35, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 11/184 (5%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 + L T++ R+Q S+ LA+ GVS ++ Q+ER +P++ ++ ++A+ L V Sbjct: 18 DTVAMLGATVRAARKQLDLSVQALAQRAGVSLGLVSQLERGLGNPSLHSIQRLASALGVS 77 Query: 63 FSTFISPPQSATPSVYDPQ-----------QQAMVITSLFPYDPQLCFEHFSIQMASGAI 111 + + PP V + + L + + + Sbjct: 78 VTRLLEPPAEELVVVRAGRPHVLPLAPGTPDDGQAVRELLSPRGETAIQLIRTTLPPAFT 137 Query: 112 SESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + P E V V+ G L + L G+ + H + NG + Sbjct: 138 NVERPFRHLGTETVTVLSGVLHITHGDREIELGAGDTATYGCSTPHWWANGHDGETVVLG 197 Query: 172 LIHY 175 + Sbjct: 198 AVAP 201 >UniRef50_Q8ERF8 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERF8_OCEIH Length = 189 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 72/177 (40%), Gaps = 11/177 (6%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 + + +KQ+R + + ++A+ G+SK++L +IE +++ +ATL KI+ L VP + Sbjct: 7 QSIGDKIKQVRLRNKKTQQQIADECGISKSLLSKIENGQTASAIATLSKISDALKVPLAW 66 Query: 66 FISPPQSATPSVYDPQQQ---------AMVITSLFPYDPQLCFEHFSIQMASGAI--SES 114 + + + + L E + + + Sbjct: 67 LLDDKEEQDLVIQRKYNRPSKVGDESMGYSYELLANRSKYSGIEPTIVHVTPKHRNLRQD 126 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + E + +++G+++L +GE Q L G+ FA H++ ++ + Sbjct: 127 KTYTHSQDEFIYILEGEIELLYNGEKQFLEKGDSAYFAGSKPHLFLPVNDRGAMVLT 183 >UniRef50_C4WPS4 Transcriptional regulator n=2 Tax=Rhizobiales RepID=C4WPS4_9RHIZ Length = 211 Score = 148 bits (375), Expect = 7e-35, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 16/194 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M + L L+ +R + W+L+ ++ TG++ + L ++E N+ T L ++A G+ Sbjct: 1 MNDAKSSLGDILRDIRSRNHWTLAEVSAMTGLAVSTLSKVENNQMQLTYDRLIQLAQGIG 60 Query: 61 VPFSTFISPPQSATP--------SVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQM 106 V + + + Q + + Sbjct: 61 VDIAELFGAVATPDELSNVMGRRTFTKSGDGRSIITQNYDYLYICTEIYKKAMVPILAVA 120 Query: 107 ASGAISESTPH-EKGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGE 164 + + E P E + V++G+L+L + L G+ F A H Y + E Sbjct: 121 HARTLEEFGPLIRHKGEEFIYVLEGELELHSEIYAPLRLKKGDSAYFDAMTGHGYLSVSE 180 Query: 165 QTVHFHSLIHYPRS 178 + + P + Sbjct: 181 EPAQILCVCSTPET 194 >UniRef50_D1N4U4 Transcriptional regulator, XRE family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4U4_9BACT Length = 193 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 15/179 (8%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M L T +K R++R +L LA+ TG++ +L +IE + P++ L IA L Sbjct: 1 MREQLIALGTRIKMARKERKMTLQTLADRTGLTAGLLSKIENFRTIPSLPVLVDIAAALE 60 Query: 61 VPFSTFISP------------PQSATPSVYDPQQQAMVITSLF-PYDPQLCFEHFSIQMA 107 + F +V + + + +F + + + + Sbjct: 61 TDLAEFFRDMTLGSKARWLLVRPEEQKTVEREEGRHLHYRMIFETSLSAVNMQMMYVTIP 120 Query: 108 SGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 S P E + ++DG+ + E L G+ + F + H+ N Sbjct: 121 --CGSGGEPVSTEGDELLYILDGRFRYRLGDEVVELTPGDALYFDGTLPHVPENDSGAP 177 >UniRef50_C6QC19 Transcriptional regulator, XRE family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QC19_9RHIZ Length = 218 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 69/185 (37%), Gaps = 14/185 (7%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 L + +K+ R + +L+ L+ G+S AML +IE + ++ L ++ + + Sbjct: 33 LESRIGAVIKRRRAEANLTLADLSAGAGLSSAMLSRIENGMAMASLDALERLCAAVGIGL 92 Query: 64 STFISP-----------PQSATPSVYDPQQQAMVITSLFPYD--PQLCFEHFSIQMASGA 110 ++ V + L YD P+ FE F I+M + Sbjct: 93 GDLFKETDTQRGSAQLVKRAEQMEVVRVGTKFGHTYRLLAYDRGPRKLFEPFFIEMDKKS 152 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 S E + ++ G+++ + G+ F+ DV H + + F Sbjct: 153 ESYPRF-SHPGTEFIYMLQGRMEYRFGDRTYLVEPGDAFTFSGDVVHGPEKLLDDRIRFL 211 Query: 171 SLIHY 175 ++I Y Sbjct: 212 AIIFY 216 >UniRef50_B6FWR1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWR1_9CLOT Length = 204 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 69/195 (35%), Gaps = 24/195 (12%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + + +K+LR Q+ +L ++E T +S L Q+ER +S +L KIA L V Sbjct: 1 MNKNIGAKIKRLRTQKQMTLKDMSEKTNLSIGFLSQLERGLTSVATDSLEKIADVLEVDL 60 Query: 64 STFISPPQSATPSVYDPQQQA--------MVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + F P+ +V ++ + L I++ G +ES Sbjct: 61 TYFFMKPKEHKKTVIRSYEKEVFEITDGKYINYHLSSNLTDKIMFPKLIEILPG-TAESD 119 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRF------------AA---DVTHIYR 160 E + V++G L L + L G+ + + + + H Sbjct: 120 GFNYSGEEFIYVLEGILTLNMAESEVDLYPGDSIHYSYKNKVMLKNGEDSKIVNQNHSLL 179 Query: 161 NGGEQTVHFHSLIHY 175 N + + Sbjct: 180 NKTNKVTKVIIVSVP 194 >UniRef50_C8XAN3 Transcriptional regulator, XRE family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XAN3_NAKMY Length = 225 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 13/184 (7%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + LK +R+ + +L +AEA+G++K L +IER+ +S +VA L +I L + Sbjct: 12 NEETARIGAKLKAIRRAQRRTLEEVAEASGLTKGFLSKIERDLASASVAALLRICATLGI 71 Query: 62 PFSTFISPPQSATPSVYDPQQ--------QAMVITSLFPYDPQLCFEHFSIQMASGAISE 113 P S+ + V Q Q + L P+ + + + G S Sbjct: 72 PLSSLFESDSTGE--VVRAGQYPRIDFGGQDLEEYQLTPFA-ERRVQVLRSDIRPGGGSG 128 Query: 114 STPHE-KGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGG-EQTVHFHS 171 + +E V+ G+L + L G+ F A V H +R ++ Sbjct: 129 PEAYSLPAEVEFAYVVTGRLAIGFADRTVELGPGDAFTFDATVNHTFRAEAVDELTTVLW 188 Query: 172 LIHY 175 ++ Sbjct: 189 VLCP 192 >UniRef50_Q16E31 DNA-binding protein n=27 Tax=Alphaproteobacteria RepID=Q16E31_ROSDO Length = 190 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 12/186 (6%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 + + + L L+ LR+ RG +L+ LAE G S L Q+ER++S P+++ L IA L Sbjct: 5 LPDEPQTLGADLRALRKARGLTLADLAERLGRSVGWLSQVERDKSDPSISDLRAIAKVLE 64 Query: 61 VPFSTFI----SPPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGA 110 V S + A V ++ M ++ L D FE G+ Sbjct: 65 VSISMLFRHAPATATEAGYIVRAAARRPMGSKTEGLVEELLSPDLTDDFEMVHSTFEPGS 124 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFH 170 S + E ++ G L + ++ T+ G+ R + + N + Sbjct: 125 R-VSEMVTRPTQEVAYLLSGTLQIEINDTVHTIYPGDSFRIRGEAF-RWSNPYAEPAVAI 182 Query: 171 SLIHYP 176 +I P Sbjct: 183 WVIAPP 188 >UniRef50_Q8RFX4 Transcriptional regulator, MerR family n=5 Tax=Fusobacterium RepID=Q8RFX4_FUSNN Length = 199 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 8/182 (4%) Query: 3 NLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVP 62 N + T+K +R+ + L +A G+S +ML QIE+ ++P++ T+ IA L VP Sbjct: 16 NKEINVGITIKNIRKSKKLLLKDVALKCGISSSMLSQIEKGNANPSLNTIKSIAQVLEVP 75 Query: 63 FSTFISPPQSATPSVY--DPQQQ-----AMVITSLFPYDPQLCFEHFSIQM-ASGAISES 114 F + + + V L D + E + + A + Sbjct: 76 LFKFFMDLEKEKYEFHLLKKDDRKIISTEYVTYELLSPDVETNIECMQMTLIGKNAETSV 135 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 P E V+++G++ L + L+ G+ + + V H + N + + Sbjct: 136 KPMAHKGEEIAVLLNGKVKLTIGKFSIVLSSGDSIHIPSMVPHKWTNLHTEKSVVIFSVS 195 Query: 175 YP 176 P Sbjct: 196 PP 197 >UniRef50_A3I2V3 Transcriptional regulator, XRE family protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2V3_9SPHI Length = 194 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 17/186 (9%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 E+L + +K +R+++GW L A+ +G+S AML +IE PT+ +L +I LN+ Sbjct: 5 EHLTIQIGNKIKGIRKEKGWKLGEFADKSGMSIAMLSKIENGRVIPTIPSLMQIINTLNL 64 Query: 62 PFSTFISP---PQSATPSVYDPQQQ-----------AMVITSLFPYDPQL-CFEHFSIQM 106 + F S ++ ++ + + E + + Sbjct: 65 NLADFFSDLKVDGDFNGFIFRKKEDYVSLSKEEDSVGYHYQMILNFPIDKASMEISLLTL 124 Query: 107 ASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQT 166 S A E E++ +I G+L + E + G+ + F ++ H+ +N Sbjct: 125 DSHAQREK--LSTSGFEYIYLIKGKLTYELGDETLEMEEGDSLFFDGEMPHVPKNTQSNE 182 Query: 167 VHFHSL 172 + Sbjct: 183 AILLVV 188 >UniRef50_C6D5R2 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5R2_PAESJ Length = 187 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 13/179 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 L ++ +R+++ + ++ A G +K+ML +IE + P VATL KIA+ L V S Sbjct: 2 ELGKRIRLIRKEQKRTQDEVSAACGFTKSMLSKIENGSTMPAVATLMKIASALGVKVSDL 61 Query: 67 ISP-PQSATPSVYDPQ----------QQAMVITSLFPYDPQLCFEHFSIQMASGAISEST 115 + P P+S T + + + + + G + +S Sbjct: 62 LEPSPKSGTVYINASDYQEPEKWIKTDKGYSFFAFASGRRDKIMQPYLFVAERGEV-KSH 120 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 E + V+ GQ+ V +N G+G+ F + H+ EQ V + ++ Sbjct: 121 VFSHEGQEFIYVLSGQMKYKVGSTEYEMNAGDGMYFNSLEEHLVIPVSEQ-VKYLAIFT 178 >UniRef50_A8RH93 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RH93_9CLOT Length = 184 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 73/180 (40%), Gaps = 12/180 (6%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + +++LR+++ +L +AEATG+S + Q+ER P++++L K++ L V Sbjct: 1 MVGEKIRKLRKEKKLTLKDIAEATGLSIGYISQLERGAVEPSLSSLRKVSEFLGVSP-YL 59 Query: 67 ISPPQSATPSVYDPQQQAM-----------VITSLFPYDPQLCFEHFSIQMASGAISEST 115 + P++ Q+ + +++ + + Q+ G Sbjct: 60 LVDQSEHHPAMVKSDQRPIIKFPKSEIFYEIVSPMSAPEYTPSSMVIQFQIEPGGHDSEE 119 Query: 116 PHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHY 175 E V+++ G+ D+ + LN G+ + ++ H N GE ++ Sbjct: 120 FLTHPSEEIVILLQGEADMVLGETSYHLNAGDSLVVRPNMPHRTINTGETPAIGFCVMTP 179 >UniRef50_Q13RR3 Transcriptional regulator, XRE family n=8 Tax=Burkholderia RepID=Q13RR3_BURXL Length = 276 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 12/185 (6%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + L ++ RQ + +L + GVS++ L ++E SPT L KI GL + Sbjct: 74 DPSTTDLGRRVRAARQAQDLTLETASRLCGVSRSTLSKVENGLMSPTFDVLQKIVLGLKI 133 Query: 62 PFSTFISPPQSATPSVYDP----------QQQAMVITSLFPYDPQLCFEHFSIQMASGA- 110 + S + + L F I++++ Sbjct: 134 EIGELFGSTPKVSASGRRALTRKNEGQRHAYRGYQMELLATDLAHKAMLPFRIRISAHTL 193 Query: 111 ISESTPHEKGVIEHVVVIDGQLDLCVD-GEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 + E + VI G + L + LN G+ + F + H + E+ Sbjct: 194 DAFDDWGRHEGEEFLYVISGSVCLYSELYAPTHLNAGDSLYFDSRTGHAAVSTSEEDAEV 253 Query: 170 HSLIH 174 + Sbjct: 254 LWMAT 258 >UniRef50_A1BBT3 Transcriptional regulator, XRE family n=3 Tax=Rhodobacterales RepID=A1BBT3_PARDP Length = 184 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 11/183 (6%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + + ++ LR+ RG +L LA G S L Q+ER +++P+V L +I+ L V Sbjct: 1 MGHHVGEDIRSLRKSRGMTLLELAGDVGRSVGWLSQVERGQTTPSVHDLGQISDRLGVNI 60 Query: 64 STFI----SPPQSATPSVYDPQQQAM------VITSLFPYDPQLCFEHFSIQMASGAISE 113 S F P+ + + + ++ L FE A GA S Sbjct: 61 SFFFRSSSRAPEERGLVLRAADRTPIGSQESGLVEELLSPTLSGSFEMIKSTFAPGASSG 120 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 + + V+I G+L L + L G+ +F + + +RN G++ ++ Sbjct: 121 GRRKARPKEDGGVLISGRLTLIIGDREIQLEPGDSFQFR-ETDYAWRNDGKEPAVAIWIV 179 Query: 174 HYP 176 P Sbjct: 180 SPP 182 >UniRef50_A8TWQ8 Transcriptional regulator, Cro/CI family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWQ8_9PROT Length = 195 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 9/185 (4%) Query: 2 ENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNV 61 + ++ + LR + S +LA GVSK ++ QIE+ S+P +ATL ++A+ L V Sbjct: 7 DATTAVIARNVALLRHGQRLSYEQLARRAGVSKGVVVQIEQARSNPNIATLCRLASALGV 66 Query: 62 PFSTFISPPQSATPSVYDPQQQAMVI--------TSLFPYDPQLCFEHFSIQMASGAISE 113 ++ A V + ++ L E + + +G + Sbjct: 67 AVVDLLAEDSGAGVRVVRADEVPVLWSGPNGGTARLLAGTRGPDMLELWEWVLHAGERYD 126 Query: 114 STPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLI 173 H G E V V++G L + VDG+ L G+G+ FA D H Y + V F + Sbjct: 127 GAAHAAGTREIVHVVEGVLAIEVDGQRIDLAAGDGMTFAGDRRHAYLAVSD-LVRFTMAV 185 Query: 174 HYPRS 178 H P + Sbjct: 186 HEPPA 190 >UniRef50_B8J4U1 Transcriptional regulator, XRE family n=8 Tax=Desulfovibrionales RepID=B8J4U1_DESDA Length = 189 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 16/187 (8%) Query: 5 ARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFS 64 AR + + ++ R++R L LA+ TG+ + L ++E + P++ L K+A L V Sbjct: 4 ARTIGSRIRAFREEREVDLETLAQNTGLDQCYLQKLESDTIYPSIGPLQKVARALGVRLG 63 Query: 65 TFISPPQSATP---------------SVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASG 109 TF+ + P + + L E F I++ Sbjct: 64 TFLDDQFTRDPIMGCIHNSCEGEEALHTGRIPRPSYTYQPLGKGKNDRNMEPFHIRIFPD 123 Query: 110 AISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHF 169 + E E ++V+ G+L + E L GE + + + V H G++ V Sbjct: 124 SG-ERKTSSHQGEEFILVLKGELLVVYGRENHVLKPGETIYYNSIVPHYVGAAGDEPVEI 182 Query: 170 HSLIHYP 176 ++ + P Sbjct: 183 LAVAYNP 189 >UniRef50_A4FBL3 Transcriptional regulator, Cro/CI family n=2 Tax=Actinomycetales RepID=A4FBL3_SACEN Length = 194 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 8/179 (4%) Query: 6 RFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFST 65 R ++ ++ R + G SL L VSK L +E + +P +ATL ++A L V S Sbjct: 9 RTVAHNVRAARVRAGLSLEELGRRAQVSKGALVALENAQGNPNLATLVRLADTLGVSVSA 68 Query: 66 FISPPQSATPSVYDP--------QQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPH 117 + P V ++ + E + ++ S PH Sbjct: 69 LMQGPPEGRVRVVAADAVAPLWTGERGGEARLVLTTSGSAPVEVWRWRLEPDEEYPSHPH 128 Query: 118 EKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 + GV+E V V G++ L VDG + + G+ F D H YR G +T H +H P Sbjct: 129 QAGVVETVSVTSGRMVLVVDGVERVVEAGQTATFDGDAPHAYRGSGTETCHLIMTVHLP 187 >UniRef50_A4AL40 Putative regulatory protein n=2 Tax=Actinobacteria (class) RepID=A4AL40_9ACTN Length = 195 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 3/166 (1%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 ++ L++ RQ + +L LA+ATG+SK+ L ++E + P++ L + L+VP Sbjct: 13 QIAPRLRRARQNKNLTLDDLAQATGISKSTLSRLESGQRKPSLELLLPVVAALSVPLDQI 72 Query: 67 ISPPQSATPSVYDPQQQAMVITSLFPYDPQLCF-EHFSIQMASGAISESTPHEKGVIEHV 125 ++ P+ A P V +A L P L + F I +A+ E T G E + Sbjct: 73 VTSPRIADPRVAQKSTRADG-RMLTPLSQHLGKPQAFKITIAA-TDGEPTLRTHGGYEWI 130 Query: 126 VVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 V++G+L L + + GE F H + + G V S Sbjct: 131 YVLEGRLRLVLGEHDIVMGTGEAAEFDTKNPHWFGSSGNGPVEILS 176 >UniRef50_C9XR14 Putative transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XR14_CLODC Length = 181 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 10/181 (5%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 M +L L + ++R+++ S+ LA+ V+ ++L QIER ++P+V +L IA+ LN Sbjct: 1 MNDLN--LGEKIAEVRKKQNLSIRDLAKLADVTPSLLSQIERGLANPSVNSLKSIASSLN 58 Query: 61 VPFSTFISPPQSATPSVYDPQQQAM--------VITSLFPYDPQLCFEHFSIQMASGAIS 112 VP TF + + VI + D E + +A S Sbjct: 59 VPLFTFFVSEVDKKNLIVRHDNRKKVILPGSKEVIYEILIPDSSGNLEFAIMDLAPNTSS 118 Query: 113 ESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSL 172 E V++G++ L +D + TL+ G+ V+ H ++N Sbjct: 119 CIDRITHNGDEIAYVLEGEVKLFMDDDEFTLSKGDSVKVPLGTKHKWQNDSNSESKVIFA 178 Query: 173 I 173 + Sbjct: 179 V 179 >UniRef50_A9IK40 Predicted transcriptional regulator n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IK40_BORPD Length = 219 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 12/184 (6%) Query: 4 LARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPF 63 + +L L+QLR+Q G SL ++A+A G+S +L Q+ER SSP+V + +A V Sbjct: 28 IDFWLGQQLRQLRKQHGLSLMQVAKACGISVGLLSQVERGLSSPSVKIVTLLAGQFGVSV 87 Query: 64 STFISPPQSATPSVYDPQQQAMVITSL-----------FPYDPQLCFEHFSIQMASGAIS 112 + + +A + + + ++A G + Sbjct: 88 DSLLRGTGQGGGEAAGRVARAGTHRRVDLLDKGIHKEMYTPPAGRSLDLCRARIAPGGST 147 Query: 113 ESTPHEKG-VIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHS 171 + +V+ G L+L V+ + L G+ +A+ +RN G Sbjct: 148 GDDLFSTCMGEQIGLVLQGTLELWVEDQVMLLRAGDSFCYASRTPRRWRNPGSDVAEVIW 207 Query: 172 LIHY 175 I Sbjct: 208 AISR 211 >UniRef50_A0QRJ5 Transcription regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QRJ5_MYCS2 Length = 189 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 4/172 (2%) Query: 9 STTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFIS 68 L+Q R++RG SL+ +A V+K L ER ++ +V L +I L + Sbjct: 5 GARLRQFRRERGMSLTDVAAKAEVTKGFLSLAERGMTNVSVPVLMRICDALGIGIGDLFE 64 Query: 69 PPQSATPSVYDPQ----QQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEH 124 P + V L + + M G S Sbjct: 65 YPAAPIVRSGAGAPLEMGGHGVREELLTPKTEHHVQVMRTVMRPGGGSGGAYRLDAATIV 124 Query: 125 VVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYP 176 V+ G L + VDGE LN G+ + F A H + N I P Sbjct: 125 AYVLRGALSITVDGETVVLNVGDCLTFGAKQLHDWHNPTAGEAEVLWTIAPP 176 >UniRef50_A4YW73 Putative HTH-type transcriptional regulator n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YW73_BRASO Length = 184 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 13/181 (7%) Query: 7 FLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTF 66 + L++ R +G + LA+ G ++M+ +IE + P++ L K+ L+ ++F Sbjct: 2 NIGPRLRRARLSKGMRMRDLAQIVGCDESMISKIEAGKVMPSLPMLDKMVHALDRDMASF 61 Query: 67 ISPPQSATPSVYDPQQQ------------AMVITSLFPYDPQLCFEHFSIQMASGAISES 114 V P+ + +V L P E +A G + Sbjct: 62 FGLRVDDYKQVQKPEDRMKVYVDALRGGKGVVYERLVPVAAGNLLEANIHVVAPGGE-KI 120 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 +I G ++L +D + G+ F A +T+ YRN G + Sbjct: 121 DLITHQGEAVGYLISGTIELTIDDTTYLMTAGDSFFFKAYLTNSYRNVGTDEARIVWVNT 180 Query: 175 Y 175 Sbjct: 181 P 181 >UniRef50_D2JL57 DNA-binding protein, putative n=1 Tax=Staphylococcus aureus RepID=D2JL57_STAAU Length = 182 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 8/180 (4%) Query: 1 MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLN 60 ME + ++T L+++R Q+ SL L++ T VSKA+L QIE+ ++PT++TLWKIA GLN Sbjct: 1 MEYINEIIATNLRKIRNQKRMSLDDLSKLTSVSKAVLFQIEKGTTNPTISTLWKIAEGLN 60 Query: 61 VPFSTFISPPQSATPSVYDPQQ------QAMVITSLFPYDPQLCFEHFSIQMASGAISES 114 +P S I + + ++ + + + E F I + + ES Sbjct: 61 IPLSNIIH--KRKSATIVRKDETIPLNDNSNNVKIYSHIPCYRNLEIFDIVLNKDGVLES 118 Query: 115 TPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIH 174 + H+ G E V + G++ + ++ E L E +RF ++V+H Y N G + + H Sbjct: 119 SGHDIGAEELVFIKVGKVKVTIENEEFILTENEILRFDSNVSHSYENIGSEECIVMIVNH 178 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.176 0.527 Lambda K H 0.267 0.0537 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,470,340,414 Number of Sequences: 3077464 Number of extensions: 80539387 Number of successful extensions: 283454 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 15225 Number of HSP's successfully gapped in prelim test: 4843 Number of HSP's that attempted gapping in prelim test: 261355 Number of HSP's gapped (non-prelim): 21126 length of query: 178 length of database: 1,040,396,356 effective HSP length: 120 effective length of query: 58 effective length of database: 671,100,676 effective search space: 38923839208 effective search space used: 38923839208 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 89 (38.5 bits)