09/01/2012 02:35:32 : INFO  : Run start: Mon Jan  9 02:35:31 GMT 2012
09/01/2012 02:35:39 : INFO  : Initialised job
09/01/2012 02:35:41 : INFO  : Renaming log file 'phyre2_20120109_023530.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/afaca14b24b61a9c/phyre_20120109_023530.log'
09/01/2012 02:35:43 : INFO  : Initialised job:
Sequence
>batch____
MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRF
VVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKL
YLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTL
LKPTAQ

09/01/2012 02:35:44 : INFO  : Checked sequence
09/01/2012 02:35:49 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 02:35:50 : INFO  : PSI-BLAST 3 iterations
09/01/2012 02:37:24 : INFO  : PSI-BLAST 5 iterations
09/01/2012 02:39:41 : INFO  : Finished PSI-BLAST
09/01/2012 02:39:44 : INFO  : Running Buildali to generate a3m file
09/01/2012 03:25:24 : INFO  : Converting to HMM
09/01/2012 03:25:29 : INFO  : Calibrating HMM
09/01/2012 03:25:40 : INFO  : Searching HMM database
09/01/2012 03:28:54 : INFO  : Finished buildali
09/01/2012 03:28:56 : INFO  : Predicting secondary structure
09/01/2012 03:29:05 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 03:29:07 : INFO  : Predicting Disordered regions
09/01/2012 03:29:12 : INFO  : Predicted Disorder (Disopred)
09/01/2012 03:29:13 : INFO  : Running memsat_svm check
09/01/2012 03:32:38 : INFO  : Globular protein
09/01/2012 03:32:39 : INFO  : Predicted Transmembrane (memsat_svm) ID 'afaca14b24b61a9c'
09/01/2012 03:32:41 : INFO  : Initialising fold library search
09/01/2012 03:32:45 : INFO  : Initialised search input
09/01/2012 03:32:47 : INFO  : Building Ensemble models
09/01/2012 03:32:53 : INFO  : Building hh.c3eg7F_.model.1.pdb
09/01/2012 03:33:11 : INFO  : Building c3tcvB_.1.pdb
09/01/2012 03:33:24 : INFO  : Building c3eg7F_.2.pdb
09/01/2012 03:33:39 : INFO  : Building c2zxvD_.3.pdb
09/01/2012 03:33:52 : INFO  : Building c3pzjB_.4.pdb
09/01/2012 03:34:06 : INFO  : Building c3owcA_.5.pdb
09/01/2012 03:34:19 : INFO  : Building d1nsla_.6.pdb
09/01/2012 03:34:31 : INFO  : Building c3igrA_.7.pdb
09/01/2012 03:34:43 : INFO  : Building c2vi7C_.8.pdb
09/01/2012 03:34:55 : INFO  : Building c2zw7A_.9.pdb
09/01/2012 03:35:05 : INFO  : Building c3fbuB_.10.pdb
09/01/2012 03:35:16 : INFO  : Building d1yrea1.11.pdb
09/01/2012 03:35:31 : INFO  : Building c1s7fA_.12.pdb
09/01/2012 03:35:47 : INFO  : Building d1s7ka1.13.pdb
09/01/2012 03:35:58 : INFO  : Building c2vzzA_.14.pdb
09/01/2012 03:36:11 : INFO  : Building c3r95A_.15.pdb
09/01/2012 03:36:24 : INFO  : Building d2fcka1.16.pdb
09/01/2012 03:36:34 : INFO  : Building d2ge3a1.17.pdb
09/01/2012 03:36:43 : INFO  : Building c2i79B_.18.pdb
09/01/2012 03:36:54 : INFO  : Building c3dr8B_.19.pdb
09/01/2012 03:37:05 : INFO  : Building d1yvoa1.20.pdb
09/01/2012 03:37:32 : INFO  : Finished HH model building
09/01/2012 03:37:33 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 03:38:24 : INFO  : html domain output complete ID 'afaca14b24b61a9c'
09/01/2012 04:09:37 : INFO  : Run end  : Mon Jan  9 04:09:36 GMT 2012
