19/01/2012 01:53:10 : INFO  : Run start: Thu Jan 19 01:53:09 GMT 2012
19/01/2012 01:53:13 : INFO  : Initialised job
19/01/2012 01:53:14 : INFO  : Renaming log file 'phyre2_20120119_015308.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/af5bc76c5a8ab6c3/phyre_20120119_015308.log'
19/01/2012 01:53:15 : INFO  : Initialised job:
Sequence
>batch____
MFVPFLIMLREGLEAALIVSLIASYLKRTQRGMXDCVMWIGVLLAAALCLGLGIFINETT
GEFPQKEQELFEGIVAVIAVVILTWMVFWMRKVSRNVKVQLEQAVDSALQRGNHHGWALV
MMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLNLGAF
FKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFDMSAVLSTHSLFGTLMEGIFGYQ
EAPSVSEVAVWFIYLIPALVAFALPPRAGATASRSA

19/01/2012 01:53:16 : INFO  : Checked sequence
19/01/2012 01:53:18 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 01:53:19 : INFO  : PSI-BLAST 3 iterations
19/01/2012 01:55:22 : INFO  : PSI-BLAST 5 iterations
19/01/2012 01:57:07 : INFO  : Finished PSI-BLAST
19/01/2012 01:57:08 : INFO  : Running Buildali to generate a3m file
19/01/2012 02:03:51 : INFO  : Converting to HMM
19/01/2012 02:03:54 : INFO  : Calibrating HMM
19/01/2012 02:04:07 : INFO  : Searching HMM database
19/01/2012 02:10:42 : INFO  : Finished buildali
19/01/2012 02:10:43 : INFO  : Predicting secondary structure
19/01/2012 02:10:49 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 02:10:51 : INFO  : Predicting Disordered regions
19/01/2012 02:10:54 : INFO  : Predicted Disorder (Disopred)
19/01/2012 02:10:57 : INFO  : Running memsat_svm check
19/01/2012 02:12:42 : INFO  : Globular protein
19/01/2012 02:12:43 : INFO  : Predicted Transmembrane (memsat_svm) ID 'af5bc76c5a8ab6c3'
19/01/2012 02:12:45 : INFO  : Initialising fold library search
19/01/2012 02:12:47 : INFO  : Initialised search input
19/01/2012 02:12:49 : INFO  : Building Ensemble models
19/01/2012 02:12:52 : INFO  : Building hh.c3jycA_.model.1.pdb
19/01/2012 02:13:06 : INFO  : Building c3jycA_.1.pdb
19/01/2012 02:13:16 : INFO  : Building c2kncA_.2.pdb
19/01/2012 02:13:27 : INFO  : Building c2rddB_.3.pdb
19/01/2012 02:13:39 : INFO  : Building c2rmiA_.4.pdb
19/01/2012 02:13:49 : INFO  : Building c1ciiA_.5.pdb
19/01/2012 02:14:00 : INFO  : Building d1d0na5.6.pdb
19/01/2012 02:14:10 : INFO  : Building d2axtz1.7.pdb
19/01/2012 02:14:24 : INFO  : Building d2fh1a2.8.pdb
19/01/2012 02:14:36 : INFO  : Building d2oara1.9.pdb
19/01/2012 02:14:47 : INFO  : Building c2k1aA_.10.pdb
19/01/2012 02:15:00 : INFO  : Building c2e62A_.11.pdb
19/01/2012 02:15:13 : INFO  : Building d1soxa2.12.pdb
19/01/2012 02:15:27 : INFO  : Building d2axtj1.13.pdb
19/01/2012 02:15:39 : INFO  : Building c1avyA_.14.pdb
19/01/2012 02:15:50 : INFO  : Building d1kbia2.15.pdb
19/01/2012 02:16:01 : INFO  : Building c2k21A_.16.pdb
19/01/2012 02:16:14 : INFO  : Building c3am6C_.17.pdb
19/01/2012 02:16:27 : INFO  : Building d1fc3a_.18.pdb
19/01/2012 02:16:40 : INFO  : Building d2iuba2.19.pdb
19/01/2012 02:16:54 : INFO  : Building c3a0bT_.20.pdb
19/01/2012 02:17:24 : INFO  : Finished HH model building
19/01/2012 02:17:25 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 02:19:32 : INFO  : html domain output complete ID 'af5bc76c5a8ab6c3'
19/01/2012 02:21:42 : WARN  : Failed to run assembler on model
19/01/2012 02:24:22 : WARN  : Failed to run assembler on model
19/01/2012 02:25:10 : INFO  : Run end  : Thu Jan 19 02:25:09 GMT 2012
