Phyre 2 alignment of P75901 with d2axti1

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Job Description | P75901
Confidence | 1.80% | Date | Thu Jan 5 12:15:51 GMT 2012
Rank | 66 | Aligned Residues | 28
% Identity | 21% | Template | d2axti1
SCOP info | Single transmembrane helix | Photosystem II reaction center protein I, PsbI | PsbI-like
Resolution | 3.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | W | A | L | V | M | M | V | F | F | A | V | A | R | E | G | L | E | S | V | F | F | L | L | A | A | F | Q | Q | D | V | G | I | W | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | I | T | V | Y | I | V | V | T | F | F | V | . | . | . | . | . | . | . | L | L | F | V | F | G | F | L | S | G | D | P | A | R | N | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |  | T | T |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 5 | . | . | . | . | 10 | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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