BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (447 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AAZ6 Replication-associated recombination protein A n... 921 0.0 UniRef50_C6C7V1 AAA ATPase central domain protein n=14 Tax=Prote... 813 0.0 UniRef50_Q480Q0 ATPase, AAA family n=114 Tax=Gammaproteobacteria... 546 e-154 UniRef50_C4KSW2 Recombination factor protein RarA n=89 Tax=Bacte... 457 e-127 UniRef50_B0RT44 ATPase n=6 Tax=Xanthomonas RepID=B0RT44_XANCB 451 e-125 UniRef50_Q1QXX6 Recombination protein MgsA n=9 Tax=Bacteria RepI... 439 e-122 UniRef50_B5Y9V9 AAA ATPase, central region n=80 Tax=Bacteria Rep... 428 e-118 UniRef50_C8R0G7 AAA ATPase central domain protein n=3 Tax=Bacter... 415 e-114 UniRef50_C6NSC7 ATPase, AAA family n=1 Tax=Acidithiobacillus cal... 412 e-113 UniRef50_Q74BH4 ATPase, AAA family n=3 Tax=Bacteria RepID=Q74BH4... 407 e-112 UniRef50_Q2LUH3 ATPase, AAA family n=27 Tax=Bacteria RepID=Q2LUH... 402 e-110 UniRef50_A7NI76 AAA ATPase central domain protein n=22 Tax=Bacte... 384 e-105 UniRef50_A8ZU04 AAA ATPase central domain protein n=5 Tax=Bacter... 380 e-104 UniRef50_D2LJI0 AAA ATPase central domain protein n=1 Tax=Rhodom... 377 e-103 UniRef50_Q3AA20 ATPase, AAA family n=34 Tax=Bacteria RepID=Q3AA2... 375 e-102 UniRef50_A3DD23 Recombination protein MgsA n=8 Tax=Bacteria RepI... 367 e-100 UniRef50_D0LV62 AAA ATPase central domain protein n=6 Tax=cellul... 367 e-100 UniRef50_Q3B4X4 Recombination protein MgsA n=36 Tax=Bacteria Rep... 365 3e-99 UniRef50_C9KPY4 Replication-associated recombination protein A n... 362 1e-98 UniRef50_C0BGA7 AAA ATPase central domain protein n=4 Tax=Bacter... 362 1e-98 UniRef50_A5V4N3 Recombination protein MgsA n=171 Tax=Bacteria Re... 354 3e-96 UniRef50_B0CAJ0 ATPase, AAA family protein n=50 Tax=Bacteria Rep... 354 5e-96 UniRef50_Q3A5K5 ATPase, AAA family n=9 Tax=Bacteria RepID=Q3A5K5... 353 8e-96 UniRef50_C6X3K0 ATPase, AAA family n=21 Tax=Bacteria RepID=C6X3K... 352 2e-95 UniRef50_Q0EY57 ATPase n=1 Tax=Mariprofundus ferrooxydans PV-1 R... 350 5e-95 UniRef50_A5FMX8 AAA ATPase, central domain protein n=9 Tax=Bacte... 344 3e-93 UniRef50_B8DZZ0 AAA ATPase central domain protein n=1 Tax=Dictyo... 341 3e-92 UniRef50_Q75JU2 ATPase WRNIP1 n=2 Tax=Eukaryota RepID=WRIP1_DICDI 340 8e-92 UniRef50_B8DU13 AAA ATPase, central domain protein n=49 Tax=Bact... 339 1e-91 UniRef50_O48696 F3I6.23 protein n=4 Tax=Embryophyta RepID=O48696... 339 2e-91 UniRef50_Q6MPI4 ATPase, AAA family n=1 Tax=Bdellovibrio bacterio... 337 5e-91 UniRef50_C8WQ98 AAA ATPase central domain protein n=2 Tax=Alicyc... 335 2e-90 UniRef50_D0N7J3 ATPase WRNIP1 n=1 Tax=Phytophthora infestans T30... 334 4e-90 UniRef50_B3E131 ATPase n=1 Tax=Methylacidiphilum infernorum V4 R... 331 3e-89 UniRef50_Q17P00 Werner helicase interacting protein n=3 Tax=Endo... 328 3e-88 UniRef50_A5GNS9 ATPase related to the helicase subunit of the Ho... 327 5e-88 UniRef50_Q2J818 Recombination protein MgsA n=12 Tax=Bacteria Rep... 327 7e-88 UniRef50_B9HZJ7 Predicted protein n=3 Tax=rosids RepID=B9HZJ7_POPTR 327 7e-88 UniRef50_B1ZVQ2 AAA ATPase central domain protein n=10 Tax=Bacte... 324 4e-87 UniRef50_Q1D8G6 ATPase, AAA family n=1 Tax=Myxococcus xanthus DK... 323 1e-86 UniRef50_C0R1V7 Holliday junction resolvase helicase subunit-lik... 322 1e-86 UniRef50_D1BNC9 AAA ATPase central domain protein n=4 Tax=Veillo... 322 1e-86 UniRef50_A5V6U8 Recombination protein MgsA n=1 Tax=Sphingomonas ... 321 3e-86 UniRef50_A5WC21 Recombination protein MgsA n=9 Tax=Bacteria RepI... 321 4e-86 UniRef50_C8W9U5 AAA ATPase central domain protein n=2 Tax=Atopob... 321 4e-86 UniRef50_Q6A8J0 Uncharacterized ATPase related to the helicase s... 318 2e-85 UniRef50_D2RB58 Recombination factor protein RarA n=2 Tax=Gardne... 317 4e-85 UniRef50_B5JJN9 ATPase, AAA family protein n=2 Tax=Verrucomicrob... 317 5e-85 UniRef50_B2KBM0 AAA ATPase central domain protein n=2 Tax=Elusim... 315 2e-84 UniRef50_A9U314 Predicted protein n=1 Tax=Physcomitrella patens ... 315 3e-84 UniRef50_A6BBM0 ATPase, AAA family (Fragment) n=1 Tax=Vibrio par... 314 4e-84 UniRef50_A6DHI5 ATPase, AAA family protein n=1 Tax=Lentisphaera ... 314 4e-84 UniRef50_A6QR70 Werner helicase interacting protein 1 n=6 Tax=Am... 313 6e-84 UniRef50_UPI00016B2545 recombination factor protein RarA n=3 Tax... 313 9e-84 UniRef50_D2AWQ0 Recombination factor protein RarA n=3 Tax=Bacter... 313 1e-83 UniRef50_A1SJC4 Recombination protein MgsA n=2 Tax=Actinobacteri... 313 1e-83 UniRef50_C5MFE6 Putative uncharacterized protein n=1 Tax=Candida... 311 3e-83 UniRef50_UPI0000D57862 PREDICTED: similar to werner helicase int... 310 6e-83 UniRef50_C6D7W1 AAA ATPase central domain protein n=2 Tax=Bacill... 310 7e-83 UniRef50_UPI000192574D PREDICTED: similar to Werner helicase int... 310 8e-83 UniRef50_A0Q7R7 AAA family-ATPase n=19 Tax=Francisella RepID=A0Q... 309 2e-82 UniRef50_C8WLQ0 AAA ATPase central domain protein n=3 Tax=Coriob... 308 2e-82 UniRef50_O13984 ATPase WRNIP1 homolog C26H5.02c n=1 Tax=Schizosa... 308 4e-82 UniRef50_A4E6Q7 Putative uncharacterized protein n=3 Tax=Collins... 307 5e-82 UniRef50_Q50739 Uncharacterized AAA domain-containing protein Rv... 306 9e-82 UniRef50_C6IZU9 AAA ATPase central domain-containing protein n=1... 306 1e-81 UniRef50_Q47N55 Recombination protein MgsA n=6 Tax=Bacteria RepI... 306 1e-81 UniRef50_P40151 DNA-dependent ATPase MGS1 n=12 Tax=Saccharomycet... 305 2e-81 UniRef50_UPI000192678D PREDICTED: similar to Werner helicase int... 305 3e-81 UniRef50_B6HVW8 Pc22g06370 protein n=36 Tax=cellular organisms R... 305 3e-81 UniRef50_C8XD35 AAA ATPase central domain protein n=21 Tax=Actin... 303 1e-80 UniRef50_Q96S55 ATPase WRNIP1 n=37 Tax=Metazoa RepID=WRIP1_HUMAN 302 1e-80 UniRef50_C9M5W8 Replication-associated recombination protein A n... 302 2e-80 UniRef50_Q4P896 Putative uncharacterized protein n=2 Tax=Ustilag... 300 7e-80 UniRef50_C4R299 Protein with DNA-dependent ATPase and ssDNA anne... 298 2e-79 UniRef50_Q8RGJ6 ATPase associated with chromosome architecture/r... 298 3e-79 UniRef50_Q6BHR7 DEHA2G16302p n=8 Tax=Saccharomycetales RepID=Q6B... 297 4e-79 UniRef50_C4Y1S6 Putative uncharacterized protein n=1 Tax=Clavisp... 296 7e-79 UniRef50_B2W7D9 DNA-dependent ATPase MGS1 n=2 Tax=Leotiomyceta R... 293 9e-78 UniRef50_C6BV47 AAA ATPase central domain protein n=12 Tax=Desul... 292 1e-77 UniRef50_C0X719 Crossover junction endodeoxyribonuclease n=29 Ta... 291 4e-77 UniRef50_UPI0001C42F86 recombination factor protein RarA n=1 Tax... 289 2e-76 UniRef50_UPI00015B415D PREDICTED: similar to werner helicase int... 288 3e-76 UniRef50_Q9WYX8 UPF0189 protein TM_0508 n=15 Tax=cellular organi... 288 3e-76 UniRef50_C7LWR1 AAA ATPase central domain protein n=3 Tax=Desulf... 286 1e-75 UniRef50_C5RHF7 AAA ATPase central domain protein n=11 Tax=Bacte... 284 4e-75 UniRef50_B6K1T7 DNA-dependent ATPase MGS1 n=1 Tax=Schizosaccharo... 283 8e-75 UniRef50_D1B930 AAA ATPase central domain protein n=2 Tax=Synerg... 282 1e-74 UniRef50_C7NB61 AAA ATPase central domain protein n=12 Tax=Fusob... 279 1e-73 UniRef50_O34528 Uncharacterized AAA domain-containing protein yr... 279 2e-73 UniRef50_A5DW03 Putative uncharacterized protein n=1 Tax=Loddero... 277 6e-73 UniRef50_B2THM3 ATPase, AAA family n=25 Tax=Clostridiaceae RepID... 271 3e-71 UniRef50_C5K6M1 Werner helicase interacting protein, putative n=... 269 2e-70 UniRef50_A6LJD0 AAA ATPase, central domain protein n=3 Tax=Therm... 269 2e-70 UniRef50_Q04QW6 Holliday junction resolvase helicase subunit-lik... 264 6e-69 UniRef50_UPI0000E4A039 PREDICTED: hypothetical protein n=2 Tax=S... 261 4e-68 UniRef50_A4EPD3 ATPase n=3 Tax=Rhodobacteraceae RepID=A4EPD3_9RHOB 255 2e-66 UniRef50_UPI0001C3744E recombination factor protein RarA n=1 Tax... 251 4e-65 UniRef50_UPI0000DB7733 PREDICTED: similar to Werner helicase int... 251 5e-65 UniRef50_B1HUL5 Putative uncharacterized protein n=4 Tax=cellula... 249 2e-64 UniRef50_B1KXC3 ATPase, AAA family n=17 Tax=Clostridium RepID=B1... 248 2e-64 UniRef50_C7H148 ATPase, AAA family n=1 Tax=Eubacterium saphenum ... 246 9e-64 UniRef50_B0EGY1 ATPase WRNIP1, putative n=2 Tax=Entamoeba RepID=... 246 1e-63 UniRef50_A9BGH8 AAA ATPase central domain protein n=1 Tax=Petrot... 243 8e-63 UniRef50_A2QW62 Function: WHIP of M. musculus is involved in agi... 239 2e-61 UniRef50_C5NXY2 Replication-associated recombination protein A n... 236 2e-60 UniRef50_Q5KCD2 Helicase, putative n=2 Tax=Filobasidiella neofor... 229 2e-58 UniRef50_C1SKW4 AAA ATPase n=1 Tax=Denitrovibrio acetiphilus DSM... 226 1e-57 UniRef50_A9NGG4 Holliday junction DNA helicase-like ATPase n=1 T... 220 8e-56 UniRef50_B3PM47 ATPase, related to the helicase subunit of the H... 219 1e-55 UniRef50_C6HUJ9 AAA ATPase n=1 Tax=Leptospirillum ferrodiazotrop... 218 3e-55 UniRef50_D1B0W0 AAA ATPase central domain protein n=5 Tax=Campyl... 217 7e-55 UniRef50_C2HPK6 Crossover junction endodeoxyribonuclease ATPase ... 217 8e-55 UniRef50_D1J7Q3 ATPase, AAA family n=1 Tax=Mycoplasma hominis AT... 215 3e-54 UniRef50_B8LS10 Putative uncharacterized protein n=1 Tax=Picea s... 205 3e-51 UniRef50_B1AII3 ATPase, AAA family n=14 Tax=Ureaplasma RepID=B1A... 202 1e-50 UniRef50_Q2NJI8 ATPase, AAA family n=7 Tax=Mollicutes RepID=Q2NJ... 202 2e-50 UniRef50_C4LVU1 AAA family ATPase, putative n=2 Tax=Entamoeba Re... 202 3e-50 UniRef50_C7M3A0 AAA ATPase central domain protein n=1 Tax=Acidim... 201 3e-50 UniRef50_A3ERK9 Probable ATPase, AAA family n=2 Tax=Leptospirill... 201 4e-50 UniRef50_A0RRQ8 ATPase, AAA family n=3 Tax=Campylobacter RepID=A... 199 2e-49 UniRef50_B6KHT5 ATPase, AAA family domain containing protein n=4... 193 1e-47 UniRef50_A7ZAZ1 ATPase, AAA family protein n=45 Tax=Epsilonprote... 193 1e-47 UniRef50_Q7NAV9 Predicted ATP/GTPase n=1 Tax=Mycoplasma gallisep... 192 3e-47 UniRef50_Q043K3 Helicase subunit of the Holliday junction resolv... 188 4e-46 UniRef50_C4LTC0 AAA family ATPase, putative n=2 Tax=Entamoeba Re... 185 4e-45 UniRef50_B2GIA8 Putative uncharacterized protein n=2 Tax=Bacteri... 182 3e-44 UniRef50_C2GHX2 Crossover junction endodeoxyribonuclease n=4 Tax... 181 4e-44 UniRef50_A9ULW2 Putative uncharacterized protein n=1 Tax=Xenopus... 180 8e-44 UniRef50_D1VIN0 AAA ATPase central domain protein n=1 Tax=Franki... 177 6e-43 UniRef50_A5IXK5 ATPase, AAA family n=2 Tax=Mycoplasma RepID=A5IX... 177 1e-42 UniRef50_Q6KHC7 ATPase n=3 Tax=Mycoplasma RepID=Q6KHC7_MYCMO 176 1e-42 UniRef50_A8BYS0 ATPase, AAA family n=2 Tax=Giardia intestinalis ... 174 7e-42 UniRef50_B7PTW3 Werner helicase interacting protein, putative (F... 171 4e-41 UniRef50_Q6CD04 YALI0C05038p n=2 Tax=cellular organisms RepID=Q6... 169 2e-40 UniRef50_C9SCJ0 ATPase WRNIP1 n=1 Tax=Verticillium albo-atrum Va... 163 9e-39 UniRef50_Q8EWR1 Predicted ATPase n=1 Tax=Mycoplasma penetrans Re... 162 3e-38 UniRef50_UPI0001698693 recombination factor protein RarA n=1 Tax... 162 3e-38 UniRef50_C6CK84 Recombination factor protein RarA n=1 Tax=Dickey... 160 1e-37 UniRef50_A5DKE6 Putative uncharacterized protein n=2 Tax=Pichia ... 148 4e-34 UniRef50_Q4SLJ4 Chromosome 15 SCAF14556, whole genome shotgun se... 144 5e-33 UniRef50_C4Y4G1 Putative uncharacterized protein n=1 Tax=Clavisp... 143 2e-32 UniRef50_A3LTW2 Replication factor ATPase n=1 Tax=Pichia stipiti... 138 4e-31 UniRef50_Q6BUL9 DEHA2C09570p n=2 Tax=Debaryomyces hansenii RepID... 138 5e-31 UniRef50_C5M4W5 Predicted protein n=1 Tax=Candida tropicalis MYA... 129 2e-28 UniRef50_B9WCE8 AAA family ATPase, putative n=1 Tax=Candida dubl... 128 4e-28 UniRef50_Q7RDE2 Putative helicase RUVBL n=4 Tax=Plasmodium (Vinc... 128 5e-28 UniRef50_A5DZ06 Putative uncharacterized protein n=1 Tax=Loddero... 127 7e-28 UniRef50_C4YKF6 Putative uncharacterized protein n=2 Tax=Candida... 120 1e-25 UniRef50_A4A3A9 Putative uncharacterized protein n=1 Tax=Congreg... 100 8e-20 UniRef50_Q8IIN7 Conserved Plasmodium protein n=2 Tax=Plasmodium ... 91 9e-17 UniRef50_B3L4S8 Putative uncharacterized protein n=2 Tax=Plasmod... 87 1e-15 UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 T... 85 4e-15 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 82 4e-14 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 81 1e-13 UniRef50_C5NYK0 DNA polymerase III subunit gamma/tau n=1 Tax=Gem... 80 2e-13 UniRef50_C7M8P5 DNA polymerase III, subunits gamma and tau n=1 T... 79 2e-13 UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 T... 79 3e-13 UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Ta... 79 3e-13 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 79 4e-13 UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma ... 79 4e-13 UniRef50_B4VVC8 DNA polymerase III, subunits gamma and tau n=1 T... 79 4e-13 UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candida... 79 5e-13 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 79 5e-13 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 78 8e-13 UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenel... 78 8e-13 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 77 1e-12 UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 T... 77 2e-12 UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n... 77 2e-12 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 76 2e-12 UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacter... 76 2e-12 UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Ta... 76 3e-12 UniRef50_A7HJD6 Holliday junction ATP-dependent DNA helicase ruv... 75 4e-12 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 75 5e-12 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 75 5e-12 UniRef50_Q4A6Z5 DNA polymerase III gamma and tau subunit n=1 Tax... 75 5e-12 UniRef50_UPI0001903DAA recombination factor protein RarA n=1 Tax... 75 7e-12 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 75 7e-12 UniRef50_Q601S8 DNA polymerase III gamma-tau subunits n=5 Tax=My... 74 9e-12 UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 T... 74 9e-12 UniRef50_Q0B0W5 DNA-directed DNA polymerase n=1 Tax=Syntrophomon... 74 1e-11 UniRef50_A4CK17 DNA polymerase III subunit gamma/tau n=6 Tax=Bac... 74 1e-11 UniRef50_P38629 Replication factor C subunit 3 n=10 Tax=Saccharo... 74 1e-11 UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 74 1e-11 UniRef50_D1C546 DNA polymerase III, subunits gamma and tau n=1 T... 74 2e-11 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 73 2e-11 UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 T... 73 2e-11 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 73 2e-11 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 73 2e-11 UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 T... 73 2e-11 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 73 2e-11 UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcu... 73 2e-11 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 73 3e-11 UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 T... 73 3e-11 UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 T... 73 3e-11 UniRef50_B1VAI4 DNA polymerase III, gamma/tau subunit n=1 Tax=Ca... 72 3e-11 UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 72 4e-11 UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 T... 72 4e-11 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 72 5e-11 UniRef50_D1J7N2 DNA polymerase III subunit gamma and tau n=1 Tax... 72 5e-11 UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Ta... 72 5e-11 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 72 6e-11 UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 T... 72 6e-11 UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 T... 71 7e-11 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 71 7e-11 UniRef50_A0M2F5 DNA polymerase III subunit gamma/tau n=20 Tax=Ba... 71 7e-11 UniRef50_Q0C591 DNA polymerase III, subunits gamma and tau n=1 T... 71 8e-11 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 71 8e-11 UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 T... 71 9e-11 UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 71 9e-11 UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 T... 70 1e-10 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 70 2e-10 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 70 2e-10 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 70 2e-10 UniRef50_D1AJH2 DNA polymerase III, subunits gamma and tau n=2 T... 70 2e-10 UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 T... 70 2e-10 UniRef50_C5CHM0 DNA polymerase III, subunits gamma and tau n=1 T... 70 2e-10 UniRef50_Q2NK09 DNA polymerase III, gamma/tau subunit n=3 Tax=Ca... 70 2e-10 UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 T... 69 3e-10 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 69 3e-10 UniRef50_D0JBQ2 DNA polymerase III subunit gamma/tau n=1 Tax=Bla... 69 3e-10 UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Mic... 69 4e-10 UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicr... 69 4e-10 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 69 4e-10 UniRef50_A8GRW7 Holliday junction ATP-dependent DNA helicase ruv... 69 4e-10 UniRef50_C2MCK6 DNA polymerase III, subunits gamma and tau n=2 T... 69 4e-10 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 69 4e-10 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 69 4e-10 UniRef50_B0TVX0 DNA-directed DNA polymerase n=20 Tax=Francisella... 69 5e-10 UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 T... 69 5e-10 UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Ato... 68 5e-10 UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 T... 68 5e-10 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 68 6e-10 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 68 6e-10 UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau... 68 6e-10 UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaul... 68 6e-10 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 68 6e-10 UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 T... 68 6e-10 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 68 6e-10 UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 T... 68 7e-10 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 68 7e-10 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 68 8e-10 UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase... 68 8e-10 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 68 8e-10 UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1... 68 8e-10 UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella a... 68 8e-10 UniRef50_C8V679 Subunit of heteropentameric Replication factor (... 68 9e-10 UniRef50_Q1G919 DNA polymerase III, gamma/tau subunit n=26 Tax=L... 67 9e-10 UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 T... 67 1e-09 UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Ha... 67 1e-09 >UniRef50_P0AAZ6 Replication-associated recombination protein A n=338 Tax=cellular organisms RepID=RARA_ECO57 Length = 447 Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/447 (100%), Positives = 447/447 (100%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG Sbjct: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK Sbjct: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED Sbjct: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI Sbjct: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS Sbjct: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA Sbjct: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN Sbjct: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 RGLEGKIGEKLAWLAEQDQNSPIKRYR Sbjct: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 >UniRef50_C6C7V1 AAA ATPase central domain protein n=14 Tax=Proteobacteria RepID=C6C7V1_DICDC Length = 447 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/447 (87%), Positives = 411/447 (91%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MSNLSLDFS + FQPLAARMRP LAQYIGQQHLL GKPLPRAIEAG LHSMILWGPPG Sbjct: 1 MSNLSLDFSSHQFQPLAARMRPTTLAQYIGQQHLLGPGKPLPRAIEAGQLHSMILWGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGKTTLAE+I RY ADVERISAVTSG+K+IREA+ERARQNRNAGRRTILFVDEVHRFNK Sbjct: 61 TGKTTLAELIGRYGEADVERISAVTSGIKDIREAVERARQNRNAGRRTILFVDEVHRFNK 120 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQDAFLPHIEDGT+TFIGATTENPSFELNSALLSRARVYLLKSL T DIEQVL QAM D Sbjct: 121 SQQDAFLPHIEDGTVTFIGATTENPSFELNSALLSRARVYLLKSLDTADIEQVLAQAMVD 180 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 + RG GGQ IVLPDETRR +AELVNGDARRALN LEMMADMAEVD G+RVL P LL + Sbjct: 181 RERGLGGQHIVLPDETRRLLAELVNGDARRALNLLEMMADMAEVDADGQRVLTPALLKAV 240 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 +GERSARFDNKGDR+YDLISA+HKSVRGSAPDAALYWYARIITAGGDPLYVARR LAIAS Sbjct: 241 SGERSARFDNKGDRYYDLISAVHKSVRGSAPDAALYWYARIITAGGDPLYVARRLLAIAS 300 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA+ DA Sbjct: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMRDA 360 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 +++PDYDVP HLRNAPT LMKEMG G EYRYAHDE NAYAAGEVYFPPE+A+TRYY PT+ Sbjct: 361 KDKPDYDVPAHLRNAPTSLMKEMGLGAEYRYAHDETNAYAAGEVYFPPEMAETRYYQPTS 420 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 RGLE KIGEKLAWLA QDQNSP KRYR Sbjct: 421 RGLEAKIGEKLAWLAAQDQNSPTKRYR 447 >UniRef50_Q480Q0 ATPase, AAA family n=114 Tax=Gammaproteobacteria RepID=Q480Q0_COLP3 Length = 511 Score = 546 bits (1406), Expect = e-154, Method: Compositional matrix adjust. Identities = 273/459 (59%), Positives = 337/459 (73%), Gaps = 24/459 (5%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 ++F PLAA+MRP+ LA Y+GQQH+L PL ++IE GH HS+I WGPPG+GKTTLAE+I Sbjct: 54 SSFMPLAAKMRPKTLADYVGQQHILGGDSPLAQSIEQGHCHSLIFWGPPGSGKTTLAEII 113 Query: 71 ARYANADVERISAVTSGVKEIREAIERAR---QNRNAG-RRTILFVDEVHRFNKSQQDAF 126 A++ANA++ER+SAVTSG+KEIR AIE+A+ Q A RRT+LFVDEVHRFNKSQQDAF Sbjct: 114 AQHANAEIERVSAVTSGIKEIRSAIEKAKLRAQGEGANKRRTVLFVDEVHRFNKSQQDAF 173 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 LPHIEDGTI FIGATTENP+FELN ALLSRAR+Y LK L+ +D+ QVL +A+ Sbjct: 174 LPHIEDGTIIFIGATTENPAFELNQALLSRARLYTLKKLTRDDLAQVLQRAIS-LCEAEQ 232 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK--------------RVL 232 I L + ++++ +GDARR LN LE D + K + + Sbjct: 233 QLSIKLSVDAKQSLLNRSDGDARRLLNLLENCLDSSVTTHENKQDDQHGEQGVSGDIKTV 292 Query: 233 KPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVA 292 EL+ ++AG + A +D GD FYDLISA HKSVRGS+PDAALYWYARI+TAGGD LYVA Sbjct: 293 TVELIAQVAGSKIALYDKGGDAFYDLISAFHKSVRGSSPDAALYWYARILTAGGDALYVA 352 Query: 293 RRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTA 352 RR LAIASED+GNADPRAMQ+AI AWD F RVGP+EGERAIAQA VY+A APKSNAVY A Sbjct: 353 RRLLAIASEDIGNADPRAMQLAINAWDTFHRVGPSEGERAIAQATVYMALAPKSNAVYQA 412 Query: 353 FKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 F A A++ D DVP+HL+NA + + K++G+G EYRYAHDE NA+AAGE YFP +A+ Sbjct: 413 FNKAKILAQQTCDLDVPLHLKNATSSITKDLGHGSEYRYAHDEVNAFAAGENYFPEALAK 472 Query: 413 -----TRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRY 446 TR Y PT RGLE K+ EKL +L + D+NS +RY Sbjct: 473 GDSSHTRLYQPTERGLEKKLKEKLDYLNQLDRNSHDQRY 511 >UniRef50_C4KSW2 Recombination factor protein RarA n=89 Tax=Bacteria RepID=C4KSW2_BURPS Length = 436 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 239/442 (54%), Positives = 299/442 (67%), Gaps = 11/442 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L F+ +PLA +RP+ LA IGQ HLL GKPL A E+G HSMILWGPPG Sbjct: 1 MSDL---FAVEPRRPLAEALRPKTLADVIGQTHLLGEGKPLRLAFESGKPHSMILWGPPG 57 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFN 119 GKTTLA + A + + +SAV GVK+IREA+E+AR N GR TILFVDE+HRFN Sbjct: 58 VGKTTLARLTALAFDCEFIALSAVLGGVKDIREAMEQARDTLNRTGRHTILFVDEIHRFN 117 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 K+QQDA LP +E G +TFIGATTENPSFE+NSALLSRA+VY+LKSL+ +++ Q+L +A + Sbjct: 118 KAQQDALLPFVESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLAEDELRQLLKRAQD 177 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 G + D+ + +GDARR LN LE A +G + + Sbjct: 178 VALGG-----LAFDDKAVDTLVGYADGDARRFLNLLEQAQTAAS--SAGVTTIDAAFVES 230 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + RFD GD FYD ISALHKSVRGS+PD ALYW R++ G DP Y+ARR + +A Sbjct: 231 AMTMNARRFDKGGDNFYDQISALHKSVRGSSPDGALYWLCRMLDGGADPKYLARRVVRMA 290 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 ED+G ADPRAMQ+A A + R+G EGE A+AQA++YLACA KSNA Y A+ A+A Sbjct: 291 WEDIGLADPRAMQIANDAAQTYERLGSPEGELALAQAVLYLACAAKSNAGYNAYNEAMAF 350 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 R+ +VPVHLRNAPTKLMKE+GYG YRYAHDE NAYAAGE Y P + + R+Y P Sbjct: 351 VRQDKSREVPVHLRNAPTKLMKELGYGHAYRYAHDEPNAYAAGETYLPDGMREPRWYKPV 410 Query: 420 NRGLEGKIGEKLAWLAEQDQNS 441 RGLE KI +KLAWL E D+++ Sbjct: 411 PRGLETKIADKLAWLRELDRDA 432 >UniRef50_B0RT44 ATPase n=6 Tax=Xanthomonas RepID=B0RT44_XANCB Length = 456 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 226/422 (53%), Positives = 293/422 (69%), Gaps = 3/422 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP L + +GQ+ LLAA L RA+E+G +HSMILWGPPG GKTTLA ++A YA Sbjct: 24 PLAERMRPRTLDEMVGQKRLLAADSALRRAVESGRVHSMILWGPPGCGKTTLALLLAHYA 83 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 +A+ + ISAV SG+ ++R+ + A Q +GRRT+LFVDEVHRFNK+QQDAFLPHIE GT Sbjct: 84 DAEFKAISAVLSGLPDVRQVLAEAAQRFASGRRTVLFVDEVHRFNKAQQDAFLPHIERGT 143 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 I F+GATTENPSFELNSALLSR RV++L+ +S +DI + L +A+ D RG G + I + + Sbjct: 144 ILFVGATTENPSFELNSALLSRCRVHVLEGVSPQDIVEALQRALHDAERGLGQETIQVSE 203 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 + IA +GD RRAL LE+ A++A + G+ + P L ++ +R+ RFD G++ Sbjct: 204 ASLLEIASAADGDVRRALTLLEIAAELA-TGEGGE--ITPRTLLQVLADRTRRFDKNGEQ 260 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 FYD ISALHKSVR S PDAALYW R++ G DP Y+ARR +A ED+G ADPRA +A Sbjct: 261 FYDQISALHKSVRSSNPDAALYWLTRMLDGGCDPAYLARRLTRMAIEDIGLADPRAQSMA 320 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 + AWD + R+G EGE A AQ ++YLA KSNA Y AF A A+ R +VP+HLRN Sbjct: 321 LEAWDIYERLGSPEGELAFAQLVLYLASTAKSNAGYAAFNQAKAEVRASGTQEVPLHLRN 380 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 APTKLMK +GYGQ+Y+Y HD A + FP + + YY P RG+E K+ EKL L Sbjct: 381 APTKLMKTLGYGQDYQYDHDAEGGIALDQTGFPDAMGERVYYNPVPRGMEIKLKEKLDRL 440 Query: 435 AE 436 E Sbjct: 441 RE 442 >UniRef50_Q1QXX6 Recombination protein MgsA n=9 Tax=Bacteria RepID=Q1QXX6_CHRSD Length = 469 Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust. Identities = 231/431 (53%), Positives = 302/431 (70%), Gaps = 5/431 (1%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 DNT PLA RMRP L Y+GQ+ L+ GKPL R E+G + SMILWGPPG GKTTLA++ Sbjct: 35 DNT--PLAYRMRPRRLDDYVGQEALVGPGKPLRRMAESGAVRSMILWGPPGVGKTTLADI 92 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 +A + A +ER+SAV +GVK+IR A+ERAR+ + G+ T+LF+DE+HR NKSQQDA LPH Sbjct: 93 LADASGAMLERLSAVMAGVKDIRAAVERAREGQVRGQPTLLFLDEIHRLNKSQQDALLPH 152 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E G +T IGATTENPSFE+NSALLSRARVY+L+ L TED+ +VL QA+ D RG G + Sbjct: 153 VESGLLTLIGATTENPSFEVNSALLSRARVYVLRKLETEDLLRVLHQALADTERGLGKRH 212 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 I + +A +GDARRAL LE D AE + G+R L + L E+ G +++ FD Sbjct: 213 IEADEGVLETLARSASGDARRALGLLETACDFAEPTEGGER-LTLQALHEVLGHQASAFD 271 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 +GD +YDL+SA+HKS+R S PDAAL + A+ GGDPL V RR AIASEDVGNA+PR Sbjct: 272 KQGDHYYDLLSAIHKSIRSSRPDAALLYIAQFTQGGGDPLDVVRRLAAIASEDVGNAEPR 331 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ + +AAWD + R+G EG+RAIA A ++LA APKSNA+ A+ AA PD++VP Sbjct: 332 ALPLVMAAWDAYLRLGDYEGQRAIAHAALHLAIAPKSNAIDQAWNAAKQFVAAHPDFEVP 391 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY--FPPEIAQTRYYFPTNRGLEGKI 427 +LRNAPTKLM +G+G+ YRYAH+E N Y AG + +P E+ ++ PT G E + Sbjct: 392 TYLRNAPTKLMASLGHGEGYRYAHNEPNGYPAGRAHDCWPAELPAATFFAPTEYGQEKRF 451 Query: 428 GEKLAWLAEQD 438 + AW AE D Sbjct: 452 KQMQAWRAELD 462 >UniRef50_B5Y9V9 AAA ATPase, central region n=80 Tax=Bacteria RepID=B5Y9V9_COPPD Length = 459 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/433 (49%), Positives = 289/433 (66%), Gaps = 7/433 (1%) Query: 8 FSDNTFQP------LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 F D+ F+P LA RMRP L + +GQ G L + IE L S++LWGPPG Sbjct: 6 FQDSLFKPSSKWIPLAERMRPRTLDEIVGQDKAFGKGTLLRKLIEEDKLTSLVLWGPPGV 65 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 GKT++A VIA A R SAVTSG+KEI+E +E A N GRRT++FVDE+H FNK+ Sbjct: 66 GKTSIAMVIANTTKARFLRFSAVTSGIKEIKEVLEDAEVQFNMGRRTVIFVDEIHHFNKT 125 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDAFLP++E G + I ATTENPSFE+ S LLSR++V +L+ L EDI+ +L +A+ DK Sbjct: 126 QQDAFLPYVEKGAVVLICATTENPSFEIISPLLSRSKVVVLEPLEAEDIKTILYRALADK 185 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 RG G + +V+ DE IA +GDAR ALNTLEM + + G RV+ E+++E Sbjct: 186 ERGLGNERVVITDEQLMRIAVYSDGDARIALNTLEMAVFGTDPNSEGIRVISDEVISEAL 245 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 +++ +D G+ Y+LISALHKS+R S PDAALYW AR++ AG DPLYVARR + ASE Sbjct: 246 QKKTLLYDKAGEEHYNLISALHKSMRNSDPDAALYWLARMLEAGEDPLYVARRIVRFASE 305 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG ADP+A+ A+AA+D +G E +AQA+VYL+ APKSN++Y ++ A DA Sbjct: 306 DVGMADPQALMQAVAAFDAANYIGMPECTANLAQAVVYLSLAPKSNSLYVGYEKAKQDAL 365 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 E VP+HLRNAPT+LMKE+GYG++Y+Y+HD A E PP + RYY P+++ Sbjct: 366 ETMAEPVPLHLRNAPTRLMKEVGYGKDYKYSHDYEEHIADMEC-LPPNLLGKRYYLPSDQ 424 Query: 422 GLEGKIGEKLAWL 434 GLE K G++L L Sbjct: 425 GLESKYGQRLEHL 437 >UniRef50_C8R0G7 AAA ATPase central domain protein n=3 Tax=Bacteria RepID=C8R0G7_9DELT Length = 461 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 218/452 (48%), Positives = 297/452 (65%), Gaps = 25/452 (5%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 D PLA RMRP L ++GQ+HLLA K L G+L S++LWGPPG+GKTTLA + Sbjct: 16 DQPTTPLAERMRPARLDDFVGQRHLLADDKLLAGLSRHGYLPSLLLWGPPGSGKTTLARI 75 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLP 128 +A + AD SAV SGVKEIRE +ER+R+ R +GR ++LFVDE+HRFNKSQQDAFLP Sbjct: 76 LAGGSGADFVFFSAVLSGVKEIREIVERSRRIRAESGRGSVLFVDEIHRFNKSQQDAFLP 135 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 H+E G IT IGATTENPSF + + LLSR RV +L L+ ED++ +L +A+ D+ RG G Sbjct: 136 HVEAGLITLIGATTENPSFHVIAPLLSRCRVIVLNPLAAEDLQIILERALSDEERGLGKL 195 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE----- 243 + + E + + +GDAR LN+LE+ A +A+ G+ + EI GE Sbjct: 196 RLKISREAADHLISIADGDARSLLNSLEIAAALAQDQARGQTASQ-----EIGGEVQIGL 250 Query: 244 ---------RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARR 294 S R+D G+ Y+LISALHKS+R S PD ALYW R++ AG +PLY+ARR Sbjct: 251 TTVEEAIQRHSLRYDADGEEHYNLISALHKSLRDSDPDGALYWLGRMLAAGEEPLYIARR 310 Query: 295 CLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFK 354 + ASED+GNADP+A+ +A+ A + + +G EGE A+AQA+VYLA APKSNAVY A+ Sbjct: 311 LIRFASEDIGNADPQALGLAVQARESYHLLGSPEGELALAQAVVYLATAPKSNAVYAAYN 370 Query: 355 AALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTR 414 LA ++ VP+HLRNAPTKLM+++ YG++Y+YAHD+ + + P ++A TR Sbjct: 371 QVLATIKKSGSLPVPLHLRNAPTKLMRDLNYGKDYQYAHDDRLGL-VDQQHLPDQLAGTR 429 Query: 415 YYFPTNRGLEGKIGEKL-AW---LAEQDQNSP 442 +Y PTNRG E + E+L W LA++ + P Sbjct: 430 FYHPTNRGHEALVKERLEKWRKILAQRKKTQP 461 >UniRef50_C6NSC7 ATPase, AAA family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSC7_9GAMM Length = 437 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/424 (49%), Positives = 286/424 (67%), Gaps = 3/424 (0%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLAARMRP +LA++IGQ+ LL P+ + LHS++ WGPPG GKTTLA ++A Sbjct: 7 RPLAARMRPRSLAEFIGQERLLGPAGPIAAMLRQKSLHSLVFWGPPGVGKTTLAHLLAAE 66 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A+V +SAV SGV+E+R A A + R G T+LF+DE+HRFNK+QQDA LPH+E+G Sbjct: 67 QGAEVLTLSAVDSGVRELRAAAAVATERRGRGESTVLFIDEIHRFNKTQQDALLPHLEEG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+T IGATTENPSF L ALLSR R+Y+L+ L E + +L +++ D+ RG G + LP Sbjct: 127 TLTLIGATTENPSFALVGALLSRIRIYVLEPLGQEALAAILERSLHDRERGLGDLAVELP 186 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D R + +GDARR LN L++ +A + D G+R L +L AG+ FD G+ Sbjct: 187 DSARAQLLAQADGDARRLLNILDLAVQLAPLHD-GRRRLDTPVLAAAAGQAWRHFDKGGE 245 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 FYD ISALHKS+RGS DA+LYW AR++ G DPLY+ARR + +A EDVG ADPRA+++ Sbjct: 246 HFYDEISALHKSLRGSDVDASLYWLARMLDGGADPLYLARRLIRVAVEDVGLADPRALEI 305 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+AA F +G EGE A+A+A VYLA PKSN Y+A+K R +P + VP+HLR Sbjct: 306 ALAARAAFQALGSPEGELALAEAAVYLASCPKSNRTYSAWKKVQEAIRRQPSHPVPLHLR 365 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTR--YYFPTNRGLEGKIGEKL 431 NAPTKL+K++ YG++Y+Y HD +A A + Y P +A +Y + RG E ++GE+L Sbjct: 366 NAPTKLLKDLDYGRDYQYDHDFPDAIAPAQTYLPEALAGLSGPWYQASERGFEQRMGERL 425 Query: 432 AWLA 435 W+A Sbjct: 426 RWIA 429 >UniRef50_Q74BH4 ATPase, AAA family n=3 Tax=Bacteria RepID=Q74BH4_GEOSL Length = 440 Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/427 (49%), Positives = 278/427 (65%), Gaps = 7/427 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP L +Y+GQ+HLL GK L R IE+ L S+I WGPPG+GKTTLA VIA Sbjct: 17 PLAERMRPRTLDEYVGQEHLLGEGKLLRRLIESDTLTSLIFWGPPGSGKTTLARVIANAT 76 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + SA+ SG+KEIRE ++ A + + GR TILFVDE+HRFNKSQQDAFLP++E G Sbjct: 77 KSHFIFFSAILSGIKEIREIVKEAEEEKKYRGRNTILFVDEIHRFNKSQQDAFLPYVERG 136 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T T IGATTENPSFE+ + LLSR +V +L LS E++EQ+L A+ D RG G + Sbjct: 137 TFTIIGATTENPSFEVVAPLLSRCKVLVLNPLSQENVEQILRSALADPERGLGASGLAAD 196 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ +AE GD R ALNTLE A + + +G+ + E + E ++ +D G+ Sbjct: 197 DDALAFMAEQSGGDGRVALNTLETAARLVK---NGR--IDLESVREAIQKKPLLYDKGGE 251 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y++ISA KS+RGS PD ALYW AR+I AG DPL++ RR + +ASED+GNADPRA+QV Sbjct: 252 EHYNVISAFIKSMRGSDPDGALYWLARMIEAGEDPLFILRRMVILASEDIGNADPRALQV 311 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+AA F VG EG IAQA YLA APKSNA Y AALA+ R+ VP+H+R Sbjct: 312 AVAALQGFQLVGMPEGRIIIAQAATYLATAPKSNASYAGIDAALAEVRKSGALPVPLHIR 371 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 NAPT+LMK++GY + Y+YAHD Y + Y P + R+Y P G E I E++ + Sbjct: 372 NAPTRLMKDLGYHKGYKYAHDYEAGYTP-QNYLPERLEGKRFYAPRGHGYEKTIKERMDY 430 Query: 434 LAEQDQN 440 + +N Sbjct: 431 IRTLKEN 437 >UniRef50_Q2LUH3 ATPase, AAA family n=27 Tax=Bacteria RepID=Q2LUH3_SYNAS Length = 478 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 211/429 (49%), Positives = 282/429 (65%), Gaps = 10/429 (2%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 ++ + +PLA RMRPE L ++ GQ+HLL L RAIE L S+I WGPPG+GKTTLA Sbjct: 34 TEQSRRPLADRMRPETLDEFFGQEHLLKKHSLLRRAIEEDRLFSVIFWGPPGSGKTTLAR 93 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFL 127 ++A A SAV SGVKE+R+ +E A +N ++T+LFVDE+HRFNK+QQDAFL Sbjct: 94 IVAGETKAYFAAFSAVLSGVKELRKVVEEAEARWQNNRQKTVLFVDEIHRFNKAQQDAFL 153 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 PH+E G IT IGATTENPSFE+ + LLSR RV +LK S ED+ ++L + + D+ RG G Sbjct: 154 PHVESGLITLIGATTENPSFEVIAPLLSRCRVLVLKPFSDEDLVRILNRVLRDRRRGLGN 213 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + L + + +GDAR ALN+LE +A + + + + E ++ + Sbjct: 214 LGLELDQDALAYLVHTADGDARTALNSLEAVASLLAAGEGQSSRISRVQVEEALQKKGLQ 273 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D G Y+LISA HKS+RGS PDAALYW R++TAG DPLY+ARR + ASEDVGNAD Sbjct: 274 YDKSGAEHYNLISAFHKSLRGSDPDAALYWLGRMLTAGEDPLYIARRMVRFASEDVGNAD 333 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAF---KAALADARERP 364 P A+ +A+ A F +G EGE A+AQA VYLA APKSNA+Y + KAA+A P Sbjct: 334 PMALSIAMTAMQAFHFIGLPEGELALAQAAVYLATAPKSNALYAGYGRVKAAIAATGTLP 393 Query: 365 DYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI--AQTRYYFPTNRG 422 VP+H+RNAPT+LMK++GYG++YRYAHD A+ E Y P + + +Y PT+RG Sbjct: 394 ---VPLHIRNAPTRLMKDLGYGRDYRYAHDYEGAWVPQE-YLPDALLAKEHEFYRPTDRG 449 Query: 423 LEGKIGEKL 431 E I E+L Sbjct: 450 YERTIRERL 458 >UniRef50_A7NI76 AAA ATPase central domain protein n=22 Tax=Bacteria RepID=A7NI76_ROSCS Length = 544 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/459 (47%), Positives = 291/459 (63%), Gaps = 41/459 (8%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAARMRP L +++GQ H++ GK L RAI L S+ILWGPPG+GKTTLA +IA Sbjct: 22 PLAARMRPRALDEFVGQDHIVGEGKLLRRAITNDALFSIILWGPPGSGKTTLARIIADTT 81 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNA--GRRTILFVDEVHRFNKSQQDAFLPHIED 132 +A E++SAV++GV ++R ++ A Q+R +RTI+F+DE+HRFNK+QQDA LP++ED Sbjct: 82 HAHFEQLSAVSAGVADLRRVVKEA-QDRLGMFQQRTIVFIDEIHRFNKAQQDAILPYVED 140 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GTI IGATTENPSFE+N AL SRARV++L+SL+ E I ++ +A+ D RG G +++L Sbjct: 141 GTIILIGATTENPSFEVNPALRSRARVFVLESLTDEQIGVIVDRALTDAERGLGALNVLL 200 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 + R + + NGDAR ALN LE A GKR+L + + + R+ ++D G Sbjct: 201 AADARGYLINMSNGDARTALNALEAAALAKSPGIGGKRLLTVDDIRDALQSRAVQYDKNG 260 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + YD ISALHKSVR S PDAALYW R++ G DPLY+ARR + +A ED+G ADP A+ Sbjct: 261 ELHYDAISALHKSVRDSDPDAALYWLGRMLDGGEDPLYIARRVVRMAIEDIGMADPHALP 320 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + IAA +G EG+ A+AQA+VYLA APKSNAVY A+ AAL D E + VP+HL Sbjct: 321 LTIAAQQAVHFLGQPEGDLALAQAVVYLAQAPKSNAVYVAYAAALNDVAETRNEPVPLHL 380 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANA-------------------------YAAGEVY-- 405 RNAPT LMK +GY + Y+YAHD+ +A YA G Y Sbjct: 381 RNAPTALMKRLGYARGYKYAHDDDDAQAETRNEPVPLHLRNAPTALMKRLGYARGYKYAH 440 Query: 406 -----------FPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 FPP + RYY PT RG E + E+LAW Sbjct: 441 DDDDAQVEQEHFPPNLRGRRYYEPTGRGFEATVRERLAW 479 >UniRef50_A8ZU04 AAA ATPase central domain protein n=5 Tax=Bacteria RepID=A8ZU04_DESOH Length = 459 Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust. Identities = 211/450 (46%), Positives = 279/450 (62%), Gaps = 29/450 (6%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 S + +PLA RMRPE L GQ H+ L A+E G L SMILWGPPG GKTTLA Sbjct: 12 SPSGMRPLADRMRPEKLEDLAGQPHVTGPDSLLRSALEKGTLFSMILWGPPGCGKTTLAR 71 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQDAFL 127 ++A A +ISAV SGVKEIRE +E AR+ R ++ TILFVDEVHRFNKSQQDAFL Sbjct: 72 ILAGMTGAAYVQISAVLSGVKEIREVVEAARRRRGEFQKDTILFVDEVHRFNKSQQDAFL 131 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 PH+E G +T IGATTENPSFE+ AL+SR R+ +L + E + QVL +A+ D +G G Sbjct: 132 PHVESGLVTLIGATTENPSFEVIPALMSRCRLIVLNPVPEEAVRQVLLRALADTEKGLGK 191 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE---LLTEIAG-- 242 + + E +A L +GD R ALN LE A +L+P + +AG Sbjct: 192 MGLEIEPEALAHLAALADGDVRTALNNLEAAA-----------LLRPAGTGVTITLAGVE 240 Query: 243 ----ERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAI 298 +++ +D G+ Y+LISALHKS+RGS PDAA+YW R+++ G DP Y+ RR + Sbjct: 241 QALDKKALLYDKSGEEHYNLISALHKSLRGSDPDAAVYWLERMLSGGEDPFYILRRMVRF 300 Query: 299 ASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALA 358 ASED+GNADP A+ V + A + + +G EG+ AI QA VYLA APKSN++YT Sbjct: 301 ASEDIGNADPSALGVTLNAMEAYRFLGSPEGDLAIVQAAVYLATAPKSNSLYTMHGEIKR 360 Query: 359 DARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP 418 ++ VP H+RNAPT LMK++GYG+ Y+YAHD A+ + Y P ++A + +Y P Sbjct: 361 VVKQTGYLPVPKHIRNAPTNLMKDLGYGKGYKYAHDFKEAFVPQD-YLPEKLAGSLFYHP 419 Query: 419 TNRGLEGKIGEKL-AWLAEQDQNSPIKRYR 447 T RG E + E+L W A + KRYR Sbjct: 420 TQRGYEKTVKERLDKWRALK------KRYR 443 >UniRef50_D2LJI0 AAA ATPase central domain protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJI0_RHOVA Length = 455 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 205/421 (48%), Positives = 268/421 (63%), Gaps = 10/421 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PL R+RP +L IGQ+HLL G PL R + SMI WGPPGTGKTT+A ++A+ Sbjct: 31 RPLPDRLRPASLGDVIGQEHLLGEGGPLRRIADGEAPRSMIFWGPPGTGKTTVARLMAKG 90 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A A E+ISA+ SGV ++R+ + A+ + G+ TILFVDE+HRFN+SQQD+FLP +EDG Sbjct: 91 AGAHFEQISAIFSGVADLRKVFDAAKDRQRFGQGTILFVDEIHRFNRSQQDSFLPFVEDG 150 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TI IGATTENPSFELN ALLSRA+V + + L+ ++IEQ+L +A G+ + L Sbjct: 151 TIILIGATTENPSFELNGALLSRAKVLVFRRLTDDNIEQLLARA-----ESVLGKTLPLT 205 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + R A+ + +GD R ALN E D+ + LTEI R+ +D D Sbjct: 206 PDARGALIGMADGDGRTALNLTE---DVFATGRDPSHPIDTAELTEIVQRRAPLYDKNRD 262 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YDLISALHK+VRGS PDAALYW+ R+I G PLY+ARR + +A ED+G ADP A+ Sbjct: 263 GHYDLISALHKAVRGSDPDAALYWFCRMIDGGEAPLYLARRMVRMAVEDIGLADPNALVQ 322 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A AA D + +G EGE A+AQ +VYLA APKSNA Y A+ AA+ A+E P H+ Sbjct: 323 ANAAKDAYDFLGSPEGELALAQCVVYLATAPKSNAAYKAYGAAMRYAKESGSLPPPKHIL 382 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL-A 432 NAPTKLMK GYG Y Y H +G+ YFP + + +Y P RG E +I E+L A Sbjct: 383 NAPTKLMKSEGYGAGYVYDHATEEG-VSGQNYFPDGLDRAEFYHPGGRGYEVRIEERLRA 441 Query: 433 W 433 W Sbjct: 442 W 442 >UniRef50_Q3AA20 ATPase, AAA family n=34 Tax=Bacteria RepID=Q3AA20_CARHZ Length = 444 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 196/431 (45%), Positives = 277/431 (64%), Gaps = 2/431 (0%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 N PLA RMRP +L ++IGQ+H+L GK L RAI + L S+I +GPPGTGKTTLA +I Sbjct: 12 NKEAPLAYRMRPRSLDEFIGQEHILGEGKLLRRAILSDRLGSLIFYGPPGTGKTTLARII 71 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 A + E I+AVTSGV EIRE I++A++ + G RT+LF+DE+HRFNK+QQDA LP Sbjct: 72 ASTTKSGFESINAVTSGVGEIREVIKKAKEREKYYGERTVLFIDEIHRFNKAQQDALLPE 131 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E GTI IGATTENP FE+N+ LLSR+R++ K L E I +++ +A+ DK RG G Sbjct: 132 VEAGTIVLIGATTENPYFEVNAPLLSRSRIFEFKPLEPEHIREIVRRALVDKERGLGEYK 191 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 + + +E + + GDAR ALN +E+ D+ G R + E++ + +++ +D Sbjct: 192 VEISEEALDHLVTMAAGDARAALNGIELAVLTTPPDEDGVRKITVEIIEQSMQKKAIVYD 251 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 +GD YD ISA KS+RGS PDAA+Y+ AR++ AG DP ++ARR + A+EDVG ADP Sbjct: 252 KEGDNHYDTISAFIKSLRGSDPDAAVYYLARMLEAGEDPRFIARRLIVHAAEDVGLADPM 311 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ VA+AA+ VG E +A+A +Y+ACAPKSNAV A ALA R+ + +P Sbjct: 312 ALNVAVAAFHALEFVGMPEARLPLAEAAIYIACAPKSNAVIKAIDRALAVVRKGENGPIP 371 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 HLR+A KE+G G+ Y+Y HD + E Y P + R+Y P++ G E +I + Sbjct: 372 QHLRDAHYAGAKELGRGKGYKYPHDYPGHFVLEE-YLPENLKGQRFYEPSDSGQEAQIKQ 430 Query: 430 KLAWLAEQDQN 440 +L L + +N Sbjct: 431 RLKELWGKVKN 441 >UniRef50_A3DD23 Recombination protein MgsA n=8 Tax=Bacteria RepID=A3DD23_CLOTH Length = 432 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 196/426 (46%), Positives = 281/426 (65%), Gaps = 7/426 (1%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP L ++ GQ+ ++ GK L R I+A + S+IL+GPPGTGKT+LA +IA Sbjct: 6 EPLAYRMRPRTLEEFYGQEEIVGEGKLLNRMIKADRISSIILYGPPGTGKTSLARIIANS 65 Query: 74 ANADVERISAVTSGVKEIREAIERARQN--RNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 A+ E+++AVT+GV +I+ + QN N RT+LF+DE+HRFNKSQQDA LP++E Sbjct: 66 TKANFEKLNAVTAGVADIKRIVSDT-QNPILNPKGRTVLFIDEIHRFNKSQQDALLPYVE 124 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 DGTI +GATTENP FE+N AL+SR+ V++LK L ++ I++++ A+ DK RG G DI Sbjct: 125 DGTIILVGATTENPFFEVNKALISRSSVFMLKPLGSDAIKKIIRNALTDKERGLGNMDIE 184 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + ++ +A++ +GDAR ALN LE+ + V GK + +L+ E +++AR+D Sbjct: 185 IEEDALNFLADICDGDARIALNALELAVLTSPVGSDGKFHIDIQLIEECIQKKAARYDKS 244 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 G+ YD ISA KS+RGS PDAA+++ AR + AG DP+++ARR + A+EDVG A+P A+ Sbjct: 245 GEEHYDNISAFIKSMRGSDPDAAVFYLARALYAGEDPMFLARRIMICAAEDVGMANPAAL 304 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 QVA+AA VG E ++QA + +A +PKSN+ Y A AL D + + +VP+H Sbjct: 305 QVAVAAAQAVHMVGMPEARIILSQAAIMVATSPKSNSCYVAIDRALDDVKNKRTGEVPMH 364 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 LRNA T MKE+GYG+ Y+YAHD + Y P EI T YY P+ G E KI E Sbjct: 365 LRNAVTSGMKELGYGKGYKYAHDYPGNIVDQD-YLPQEIKGTVYYNPSANGYELKIKE-- 421 Query: 432 AWLAEQ 437 WL ++ Sbjct: 422 -WLEKR 426 >UniRef50_D0LV62 AAA ATPase central domain protein n=6 Tax=cellular organisms RepID=D0LV62_HALO1 Length = 463 Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust. Identities = 195/431 (45%), Positives = 266/431 (61%), Gaps = 10/431 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA RMRP++L +++GQ HLL K L R L S+ILWGPPGTGKTTLA ++A Sbjct: 15 QPLAERMRPKSLQEFVGQNHLLGPRKLLARLGPGAALPSLILWGPPGTGKTTLAHILATR 74 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIED 132 A + + ISAVT+GV+E+R+ + A R+ G RT+LF+DE+HRF+K+QQDA LPH+E Sbjct: 75 AGSRLAAISAVTAGVREMRQLVSEAGDRRDQFGSRTVLFIDEIHRFSKAQQDALLPHVEA 134 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GT+T IGATTENPSF +N+ALLSR RV L +LS E++ + +A+ D+ RG G + + Sbjct: 135 GTVTLIGATTENPSFHVNAALLSRCRVLRLGALSDEELGALARRALSDRERGLGRAAVSV 194 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDS-------GKRVLKPELLTEIAGERS 245 DE + GDARR LN LE+ + + R L E + E +++ Sbjct: 195 SDEVLTDLVAQSGGDARRMLNALEVAVSLVRGGEGEGEDEDEAPRALGREAIEEALQQKT 254 Query: 246 ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 +D GD + ++SA KS+RGS PDAA YW R++ AG DPL+V RR + ASED+GN Sbjct: 255 LLYDKAGDEHFGVVSAFIKSMRGSDPDAAAYWMTRMLEAGEDPLFVLRRMVVFASEDIGN 314 Query: 306 ADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD 365 ADP+A+ VA +A + +G EG + QA VY+ACAPKSN T + AA R+ Sbjct: 315 ADPQALAVATSALSAYQFLGMPEGVLPMTQAAVYMACAPKSNTALTTYAAARRAVRQHGA 374 Query: 366 YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 VP LRNA L +EMG+ ++YRY H+ A Y E Y P + R+Y P G E Sbjct: 375 LPVPKKLRNANNALDREMGHAKDYRYPHNFAGHYVP-ETYLPEGLEGARFYEPAESGAER 433 Query: 426 KIGEKLA-WLA 435 +GE++A W A Sbjct: 434 AMGERVARWRA 444 >UniRef50_Q3B4X4 Recombination protein MgsA n=36 Tax=Bacteria RepID=Q3B4X4_PELLD Length = 457 Score = 365 bits (936), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 197/430 (45%), Positives = 264/430 (61%), Gaps = 5/430 (1%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 FQPLA R+RP+++ + GQ+HL+ PL R + G L SMI WGPPG+GKTTLAE+ A Sbjct: 24 FQPLAERVRPQSIDEMAGQEHLVGPMGPLRRFLGGGQLPSMIFWGPPGSGKTTLAEICAS 83 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + E++SA+ SGVK++R +E A +R G RT+LF+DE+HRFNKSQQD L IE Sbjct: 84 ALDFRFEQLSAIESGVKDVRRVLENAASSRARGIRTLLFIDEIHRFNKSQQDTLLHAIEQ 143 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G + IGATTENPSFE+N+ALLSR +VY LKSL EDI V+T+A+ +D + Sbjct: 144 GVVVLIGATTENPSFEINAALLSRMQVYTLKSLGPEDIRLVVTRALSVDPL---FRDRHV 200 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 E + GDAR+ALN LE A + +D ++ +LL R+ +D+ G Sbjct: 201 QVEDMEFLLRFSGGDARKALNALE-AAFLLIAEDEDPALIGRDLLERALQHRAPIYDHGG 259 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + Y+ +SA KS+RGS PDAAL+W AR+I G DP ++ARR + ASED+GNADP A+ Sbjct: 260 EAHYNTVSAFIKSMRGSDPDAALFWLARMIEGGEDPRFIARRLVIFASEDIGNADPYAIT 319 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A++ + T +G E +AQ + YLA PKSNA Y A ALA++ D VP HL Sbjct: 320 LAVSVFQAVTLIGMPEARINLAQGVTYLASCPKSNASYIAVNQALAESASLQDLAVPKHL 379 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 NAPTK MK+ GYG YRY HD N + E YFP + YY P G E + E+L Sbjct: 380 CNAPTKFMKQEGYGAGYRYPHDFPNHFVR-ERYFPDGMEPKPYYRPVEEGREKYLAERLR 438 Query: 433 WLAEQDQNSP 442 L + +P Sbjct: 439 SLWDDRYGAP 448 >UniRef50_C9KPY4 Replication-associated recombination protein A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY4_9FIRM Length = 462 Score = 362 bits (930), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 201/425 (47%), Positives = 274/425 (64%), Gaps = 7/425 (1%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 TF+PLA RMRP N +++GQQ + G L R IE + S+I +GPPGTGKTTLA++IA Sbjct: 38 TFEPLARRMRPRNFDEFVGQQEAVGRGHFLRRMIEMDQIPSIIFYGPPGTGKTTLAQMIA 97 Query: 72 RYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHI 130 ++ E+++AV++G+ ++R ++ A + R RRTI+F+DE+HRFNKSQQD LP++ Sbjct: 98 AMTDSAFEKLNAVSAGISDLRRIVKEADEARRYYQRRTIVFIDEIHRFNKSQQDVLLPYV 157 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 EDG + IGATTENP FE+N ALLSR R+ L L+ + +VL +A++D+ RG GGQ + Sbjct: 158 EDGRLILIGATTENPFFEVNHALLSRVRIVRLYQLTDAQLVEVLRRALKDEERGLGGQHV 217 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 +PDE A+A++ GDAR ALN LE A M + +G V ++L EI GER R+D Sbjct: 218 EVPDEVLLAMAQIAGGDARMALNLLEGAAAM--LPTTGGTVTL-DMLEEITGERVQRYDK 274 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 GD YD SA KS+RGS PDAAL++ AR++ AG D ++ARR + ASEDVGNADP A Sbjct: 275 TGDNHYDTASAFIKSMRGSDPDAALHYLARMLAAGEDVKFIARRIVICASEDVGNADPMA 334 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A+AA + VG E +AQA+ Y+A APKSNA Y AAL D R + VP Sbjct: 335 LPLAMAAAEAVQFVGMPEARITLAQAVTYIASAPKSNAAYLGIDAALKDVRTKDCGTVPK 394 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLR+A K +G+GQ YRY HD N + A + Y P +I YY PT+ G E + + Sbjct: 395 HLRDAHYKGAAALGHGQSYRYPHDYPNHFEAQD-YLPDKIRTAHYYEPTDIGREKVLHDY 453 Query: 431 L--AW 433 L W Sbjct: 454 LRKCW 458 >UniRef50_C0BGA7 AAA ATPase central domain protein n=4 Tax=Bacteroidetes RepID=C0BGA7_9BACT Length = 425 Score = 362 bits (929), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 190/428 (44%), Positives = 266/428 (62%), Gaps = 21/428 (4%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP++L +Y GQ HL+ L + I G S+I WGPPGTGKTTLA+++A Sbjct: 4 PLAERMRPKSLGEYFGQDHLVGPKGSLTQMISNGVFPSLIFWGPPGTGKTTLAQLLALEK 63 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN--AGRRTILFVDEVHRFNKSQQDAFLPHIED 132 ++SA+ +GVKEIRE I +A + +G+ ILF+DE+HRF+KSQQD+ L +E Sbjct: 64 ERPFYQLSAINAGVKEIREIISKAEHSGGLFSGKSPILFIDEIHRFSKSQQDSLLNAVEK 123 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT IGATTENPSFE+ +ALLSR +VY+L +L ED+E++L A+E +D ++ Sbjct: 124 GIITLIGATTENPSFEVINALLSRCQVYVLNTLKKEDLEKILNHALE--------KDSII 175 Query: 193 PD-----ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + + A+ EL GDAR+ L+ LE++ + + K +L +L+ E S Sbjct: 176 KEYKIQLKETEALIELAGGDARKLLSLLELVI---QANSKEKLILTNDLVFETVQTNSVL 232 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 FD GD YD++SA KS+RGS P+ A+YW AR+I G D ++ARR L +A+ED+G A+ Sbjct: 233 FDKNGDFHYDIVSAFIKSIRGSDPNGAIYWLARMIEGGEDIGFIARRMLILAAEDIGIAN 292 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ +A + + VG EG +++ +YLA +PKSN Y A AA R+ + Sbjct: 293 PTALVLANSTFQAVNSVGYPEGRILLSECALYLATSPKSNTAYKAIGAAQEKVRQTGNLP 352 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP+HLRNAPTKLMKEMGYG++Y+YAHD N + E + P +I T Y P N E I Sbjct: 353 VPLHLRNAPTKLMKEMGYGEDYKYAHDFQNQFVDQE-FLPEKIKGTTLYSPGNNSKENSI 411 Query: 428 GE--KLAW 433 E KL W Sbjct: 412 REFLKLRW 419 >UniRef50_A5V4N3 Recombination protein MgsA n=171 Tax=Bacteria RepID=A5V4N3_SPHWW Length = 481 Score = 354 bits (909), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 195/419 (46%), Positives = 273/419 (65%), Gaps = 11/419 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP LA IGQ+HL + R + AG L S++LWGPPGTGKTT+A ++A Sbjct: 63 PLAERLRPRTLADVIGQEHLTGPEGAIGRMVAAGRLSSLVLWGPPGTGKTTIARLLADAV 122 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 +SAV SGV ++++ AR++ G RT+LFVDE+HRFN++QQD+FLP++EDGT Sbjct: 123 GLRFAPVSAVFSGVADLKKIFAEAREHARIGTRTLLFVDEIHRFNRAQQDSFLPYVEDGT 182 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 + +GATTENPSFELN+ALLSRA+V +L L + +++ +A E + R + L + Sbjct: 183 VVLVGATTENPSFELNAALLSRAQVLILNRLDAAALGKLIARAEEIEERA-----LPLTE 237 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 R A+ +GD R LN E + +A +D L+P L + R A +D + Sbjct: 238 GAREALVASADGDGRFLLNQAETLFSIA-IDHP----LEPGELAALLHRRMAVYDKDREG 292 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 Y+LISALHKS+RGS P AALY+ AR++TAG +PLYV RR + ASED+G ADP+A+ Sbjct: 293 HYNLISALHKSLRGSDPQAALYYLARMLTAGEEPLYVLRRLVRFASEDIGLADPQALVQC 352 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 +AA D + +G EGE AI QA +YLA APKSNA Y A KAA A++ P ++ N Sbjct: 353 LAAKDAYDFLGSPEGELAIVQACLYLATAPKSNAAYAAQKAAFRSAKDTGSLMPPKNILN 412 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 APT+LMK++GYG+ Y Y HD +A+ +G+ Y+P E+A +Y P+ RG E KI E++A+ Sbjct: 413 APTRLMKDVGYGKGYAYDHDAEDAF-SGDDYWPEEMAPQSFYVPSPRGFEAKIAERIAY 470 >UniRef50_B0CAJ0 ATPase, AAA family protein n=50 Tax=Bacteria RepID=B0CAJ0_ACAM1 Length = 742 Score = 354 bits (908), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 187/419 (44%), Positives = 268/419 (63%), Gaps = 4/419 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAAR+RP L +++GQ ++ G+ L RAI+A L S+I +GPPGTGKTTLA++IA Sbjct: 17 PLAARLRPRTLDEFVGQDEIVGPGRLLRRAIQADQLSSLIFYGPPGTGKTTLAQIIANTT 76 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AV +G+K+IR +++ A+ R G+RTILFVDEVHRFNK+QQDA LP +E+G Sbjct: 77 QAHFLALNAVLAGIKDIRSSVDEAQDRRGQYGQRTILFVDEVHRFNKAQQDALLPWVENG 136 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+ IGATTENP FE+N AL+SR+R++ L+SL +D+ QVL +A++DK GYG I L Sbjct: 137 TVILIGATTENPYFEVNKALVSRSRIFQLRSLMPDDLRQVLERALQDKYFGYGDTAIELE 196 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + + NGDAR LN LE+ + E DD G + + R+ +D +GD Sbjct: 197 GAATEHLINVANGDARALLNALELAIETTEPDDQGVIPITLAVAEASIQRRAVLYDKEGD 256 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 +D ISA KS+RGS PDAALYW AR++ AG DP ++ RR + +ASEDVG ADP+A+ V Sbjct: 257 AHFDTISAFIKSMRGSDPDAALYWLARMVYAGEDPRFIFRRMIILASEDVGLADPQAVGV 316 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +A F R+G EG+ +AQA +YL+ APKSN+ F A + +ER + DVP LR Sbjct: 317 VMACAQAFDRIGLPEGQYPLAQAALYLSTAPKSNSALAYFDALASVEKER-EGDVPNPLR 375 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 + ++ G+G Y+Y H + + A + Y P + +Y P+++G E I ++A Sbjct: 376 D-KSRDKHAFGHGANYKYPHAYRDHWVAQQ-YLPDSLQGQVFYQPSDQGAEAAIQTQIA 432 >UniRef50_Q3A5K5 ATPase, AAA family n=9 Tax=Bacteria RepID=Q3A5K5_PELCD Length = 726 Score = 353 bits (905), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 197/430 (45%), Positives = 270/430 (62%), Gaps = 9/430 (2%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 NL S + +PLA+RMRP L +Y+GQ H+L G+ L RAI A L S+I +GPPGTG Sbjct: 2 NLFSQASSFSSEPLASRMRPRTLEEYVGQDHILGEGRLLRRAIRADQLSSLIFYGPPGTG 61 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKS 121 KTTLA+VIA + ++AV SGVK++REAIE ARQ++ +RTILFVDEVHR+NKS Sbjct: 62 KTTLAQVIANSTASRFVSMNAVLSGVKDLREAIEDARQSQEYYDKRTILFVDEVHRWNKS 121 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDA LP +E GTI IGATTENP FE+N AL+SR+RV+ L L+ E++ Q++TQ ++DK Sbjct: 122 QQDALLPWVEKGTIILIGATTENPYFEVNKALVSRSRVFQLLGLTEENLRQIVTQTLQDK 181 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD---DSGKRV-LKPELL 237 RGYG + + + + +GDAR LN L++ + + R+ + Sbjct: 182 QRGYGKWQVEFEPDALDHLVRVASGDARSLLNALQLAVETTPESFPPPANSRIHITLSAA 241 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E +++ +D +GD +D ISA KS+RGS PDAALYW AR++ AG DP Y+ RR L Sbjct: 242 EESIQQKAVLYDKEGDYHFDTISAFIKSLRGSDPDAALYWMARMVRAGEDPRYIFRRMLI 301 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVG ADP A+ V AA F RVG EG+ + QA +YLA PKSN+ F A Sbjct: 302 SASEDVGMADPYALGVVEAAASAFDRVGLPEGQFHLTQATLYLATCPKSNSSLAFFDALE 361 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 A A+E + +VP HLR++ ++ G+G+ Y+Y H + + A + Y P + +Y Sbjct: 362 AVAKE--EAEVPNHLRDS-SRDEHSFGHGKGYKYPHAFRDHWVAQQ-YLPGTLKGRIFYQ 417 Query: 418 PTNRGLEGKI 427 PT +G EG I Sbjct: 418 PTGQGYEGSI 427 >UniRef50_C6X3K0 ATPase, AAA family n=21 Tax=Bacteria RepID=C6X3K0_FLAB3 Length = 442 Score = 352 bits (902), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 177/418 (42%), Positives = 269/418 (64%), Gaps = 7/418 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA +MRP+ L + GQ+HL + + +E L+S+I WGPPGTGKTT+AE+I+ + Sbjct: 23 PLAEQMRPKTLDEVRGQEHLTGEKGTVRKMLENDTLNSLIFWGPPGTGKTTIAEIISEQS 82 Query: 75 NADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 ++SAV+SGVK++RE IE A+ QN +G+ ILF+DE+HRFNKSQQD+ L +E G Sbjct: 83 GRKFFKLSAVSSGVKDVREVIEEAKKQNLFSGKSPILFIDEIHRFNKSQQDSLLHAVEKG 142 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATTENPSFE+ SALLSR++VY+LKSLS E +E++ ++++ +G + + Sbjct: 143 WIVLIGATTENPSFEVVSALLSRSQVYVLKSLSYEKLEELAELSLKNYNASHGTEFRI-- 200 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + + A + GDAR+ +N++E + + +S K+ + + E+ E A +D G+ Sbjct: 201 -KDKEAFIQYSGGDARKLINSVENV--LNNFKNSDKKEISNADVLEVLQETMALYDKNGE 257 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD+ISA KS+RGS P+ A+YW AR++ G D ++ARR L +A+ED+G A+P A+ + Sbjct: 258 QHYDIISAFIKSMRGSDPNGAVYWLARMLVGGEDVKFIARRMLILAAEDIGLANPNALVI 317 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A + +G E +++ VYLA +PKSN+ Y A A+A ++ + VP+HLR Sbjct: 318 ANNCFQAVNVIGNPEARIILSETTVYLAVSPKSNSTYLAINEAMAFVKKTGNLPVPLHLR 377 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 NAPTKLMK++ YG++Y YAH + E + P EI+ ++Y P N E KI E+L Sbjct: 378 NAPTKLMKDLNYGKDYDYAHSHEGNFVDLE-FLPDEISGEKFYNPGNNSTENKIKEEL 434 >UniRef50_Q0EY57 ATPase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY57_9PROT Length = 448 Score = 350 bits (899), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 192/434 (44%), Positives = 268/434 (61%), Gaps = 15/434 (3%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 + N++ D S PLA R+RP L GQ L AA + G S I WGPPG Sbjct: 11 LDNIASDVS----IPLAYRIRPAVLQDVAGQPDLTAADSWFSTMVSEGRCCSCIFWGPPG 66 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 GKTTLA V+A A ++SAV++G E+++ ++RAR +AG+ +LF+DE+HRFNK Sbjct: 67 VGKTTLATVMADAAGIPFVQLSAVSAGKAEVQDVVKRAR---SAGQTWLLFLDEIHRFNK 123 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +QQD LP IEDGT+ +GATTENPSF LN+ALLSR RV +L++L D+ +L +A Sbjct: 124 AQQDVLLPCIEDGTLVLVGATTENPSFSLNNALLSRCRVIVLQALQASDVAVILKRAC-- 181 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 + G + L D+ +AE +GDAR ALN LE + +R + + + Sbjct: 182 RYLGDQAKAFSLDDDALVWLAENSDGDARYALNALESL-----FQADAERCWSLQAVQQQ 236 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 + R+AR+D GD YDLISALHK +R S PDAA+YW AR++ AG PLY+ARR + +A+ Sbjct: 237 SLRRAARYDRDGDAHYDLISALHKCIRDSDPDAAVYWLARMLEAGEQPLYIARRLIRMAT 296 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 ED+G ADP+A+ +A+ A F +G EGE+ + +A +YLA + KSNA Y A K A A Sbjct: 297 EDIGLADPKALNIALDAHRMFEILGSPEGEQGLFEAAIYLALSAKSNAAYMAEKEARKLA 356 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 +VP+HLRNAPT+LM+++G+G YRYAHDE N + +FP E+ + Y P Sbjct: 357 GLTRAAEVPMHLRNAPTRLMQQLGHGAGYRYAHDEENG-VVDQRHFPTELGRPTLYRPVA 415 Query: 421 RGLEGKIGEKLAWL 434 RG E + E++ WL Sbjct: 416 RGFERTLRERIDWL 429 >UniRef50_A5FMX8 AAA ATPase, central domain protein n=9 Tax=Bacteroidetes RepID=A5FMX8_FLAJ1 Length = 425 Score = 344 bits (883), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 176/407 (43%), Positives = 260/407 (63%), Gaps = 11/407 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP L YI Q HL+ L + I G + S+I WGPPGTGKTTLA++IA+ + Sbjct: 4 PLAERIRPRTLEDYISQSHLVGPNGSLTQQISKGIIPSLIFWGPPGTGKTTLAQIIAQES 63 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN--AGRRTILFVDEVHRFNKSQQDAFLPHIED 132 +SA+ SGVK+IR+ IE+A+Q+ + ILF+DE+HRF+KSQQD+ L +E Sbjct: 64 KRPFYELSAINSGVKDIRDVIEKAKQSGGLFTAKNPILFIDEIHRFSKSQQDSLLAAVEK 123 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME-DKTRGYGGQDIV 191 G IT IGATTENPSFE+ ALLSR++VY+L + + +D+E +L +A++ DK ++I Sbjct: 124 GWITLIGATTENPSFEVIPALLSRSQVYILNAFTKDDLEALLHRAIKIDKE--LSSKNIT 181 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 L + A+ L GD R+ LN E++ + + D+ V+ + + + + + +D Sbjct: 182 LKET--EALLRLSGGDGRKLLNIFELVVNASASDEI---VITNDRVLALVQQNTVLYDKT 236 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 G++ YD++SA KS+RGS P+ A+YW AR+I G D ++ARR L ++SED+GNA+P A Sbjct: 237 GEQHYDIVSAFIKSIRGSDPNGAVYWLARMIEGGEDVKFIARRMLILSSEDIGNANPTAF 296 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A + + +G E ++Q +YLA +PKSNA Y A A ++ D VP+H Sbjct: 297 IMANNTFQAVSTIGYPESRIILSQCAIYLATSPKSNASYMAIGNAQQLVKQTGDLPVPIH 356 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP 418 LRNAPTKLMKE+GYG++Y+Y+HD AN +A E + P I +T Y P Sbjct: 357 LRNAPTKLMKELGYGEDYKYSHDYANNFAEQE-FLPDAIKETVLYNP 402 >UniRef50_B8DZZ0 AAA ATPase central domain protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZZ0_DICTD Length = 431 Score = 341 bits (875), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 175/426 (41%), Positives = 269/426 (63%), Gaps = 13/426 (3%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 DN+++PL+ RMRP L +++G + ++ L +AI G+L S+I++GPPG+GKTTL+ + Sbjct: 11 DNSYEPLSFRMRPRTLEEFLGAEDIIGEKSFLRKAINKGYLPSLIIYGPPGSGKTTLSVL 70 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLP 128 +A+ NA+ ++A GV+E++EA+++A++N +RT+LF+DE+H FNK QQD LP Sbjct: 71 LAKAINAEFIELNAAIVGVQELKEALQKAKRNLELYNKRTVLFLDEIHHFNKLQQDVLLP 130 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 +E G + IGATTENP F LN+ LLSR R+ LK LS E+IE+++ +A+EDK RG G + Sbjct: 131 FVERGIMILIGATTENPFFSLNTTLLSRCRLVELKPLSKENIERIIKRALEDKERGLGER 190 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARF 248 D+ + ++ I NGDAR ALNTLE+ + M ++GK ++ ++ E+ G+R R+ Sbjct: 191 DLEINEDAMEEIVRFANGDARIALNTLELASFMVAPSENGKLIITRNIVKEVIGKRIFRY 250 Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 D +GD Y ISA KS+RGS PDAALY+ A+++ +G DP ++ARR + A+ED+G ADP Sbjct: 251 DQRGDEHYHTISAFIKSIRGSDPDAALYYLAKMLLSGEDPRFIARRLIIHAAEDIGMADP 310 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDV 368 A+ +A +A+ VG E +A+A VYLA APKSN++ A+ E + Sbjct: 311 FALVIAQSAYYAVDVVGMPEARIPLAEATVYLATAPKSNSIIIGIDKAMRYIEEHGISVI 370 Query: 369 PVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIG 428 P HLR G +Y Y HD + + + Y P +I + +Y P+++G E I Sbjct: 371 PEHLR----------GNSPKYIYPHDYPDHFVK-QKYLPEDIGEI-FYSPSDQGKEKMIR 418 Query: 429 EKLAWL 434 E+L L Sbjct: 419 ERLENL 424 >UniRef50_Q75JU2 ATPase WRNIP1 n=2 Tax=Eukaryota RepID=WRIP1_DICDI Length = 876 Score = 340 bits (871), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 176/427 (41%), Positives = 262/427 (61%), Gaps = 20/427 (4%) Query: 7 DFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTL 66 +F +F PL+ +MRP L+ +IGQ+ LL + + ++ L S IL+GPPG GKTTL Sbjct: 188 NFKKKSFAPLSEQMRPTELSDFIGQESLLVGDPIVKKLFQSPELPSFILYGPPGCGKTTL 247 Query: 67 AEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAF 126 A+++A +N ++ +SAV SGVK+I+E I++AR G++TILF+DE+HR+NK QQD Sbjct: 248 AQIVASKSNYNINALSAVGSGVKDIKEVIDKARNTLQFGKKTILFIDEIHRYNKLQQDVL 307 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 LP IE G I IGATTENPSFELN ALLSR +V+ ++ L+ E++E ++ + +E T Sbjct: 308 LPAIESGIIILIGATTENPSFELNGALLSRCKVFKMEKLTKENLETLIKRTLE-VTPLLM 366 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR---------------V 231 + +++ ++ +++AE+ +GDAR A+N L+M + + + K V Sbjct: 367 DRRLIMDEDAIKSLAEIADGDARVAINVLDMAIKANKEEQTYKERMEEKHSTSGIVRDIV 426 Query: 232 LKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYV 291 L + + + S +D GD FY+LISALHKSVRGS +A YW R++ +G +PLY+ Sbjct: 427 LTKKQMGSLLQRTSLIYDKGGDAFYELISALHKSVRGSDANATAYWVIRMLESGCEPLYI 486 Query: 292 ARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV-- 349 RR + +ASED+G AD A+ +AIAA+ VG E AI Q VYLA A KSN+ Sbjct: 487 VRRMVRMASEDIGLADNSALPLAIAAYQAVHFVGMPECTNAILQCAVYLANAAKSNSCDH 546 Query: 350 YTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPE 409 + A + E P VP+HLRNAPTK+MK+ GYG +Y+Y H + ++Y P Sbjct: 547 WYAHTREYLEKHEGP--PVPIHLRNAPTKMMKDWGYGADYQYNHAFDDQSQVTQIYLPEP 604 Query: 410 IAQTRYY 416 I +++ Sbjct: 605 IKNEKFF 611 >UniRef50_B8DU13 AAA ATPase, central domain protein n=49 Tax=Bacteria RepID=B8DU13_BIFA0 Length = 504 Score = 339 bits (870), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 193/435 (44%), Positives = 269/435 (61%), Gaps = 15/435 (3%) Query: 7 DFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEA---GHL---HSMILWGPPG 60 D S+ +PLA RMRP L + +GQ+H+LA G PL R ++ G L S+IL+GPPG Sbjct: 10 DPSEEVVRPLAVRMRPTTLDEVVGQRHVLAPGSPLRRLADSASTGSLTAPSSVILFGPPG 69 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFN 119 GKTTLA ++A+ + E +SAVTSGVK++RE + RA + + G+ T+LF+DEVHRF+ Sbjct: 70 VGKTTLAHIVAKQSGRQYEELSAVTSGVKDLREVLRRAHERLVSQGKETVLFIDEVHRFS 129 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 KSQQDA LP +E+ +TFI ATTENPSF + LLSR+ V L+SL E++ V+ +A+ Sbjct: 130 KSQQDALLPSVENRDVTFIAATTENPSFSVIKPLLSRSVVVKLESLEPEELRTVIERAVS 189 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV---LKPEL 236 + RG GG+ V D I L GDAR++L LE A VD+SG V + ++ Sbjct: 190 NP-RGLGGKVRVQGDAVD-GIIRLAGGDARKSLTILEAAA--GAVDESGSNVPAEITTDV 245 Query: 237 LTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCL 296 ++ + + R+D GD YD+ISA KS+RGS DA L++ AR+I AG DP ++ARR + Sbjct: 246 VSTVMDVAAVRYDRNGDDHYDVISAFIKSMRGSDVDATLHYLARMIRAGEDPRFIARRIM 305 Query: 297 AIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA 356 A+E+VG A P+ +Q+ +AA +G E +++A + +A APKSNA YTA A Sbjct: 306 IAAAEEVGMAAPQILQITVAAAQAVQMIGMPEARIILSEAAIAVATAPKSNASYTAINQA 365 Query: 357 LADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 LAD VP+H+RNAPT LMK G + Y YAHD NA + Y P + YY Sbjct: 366 LADVDAGLIGQVPLHIRNAPTTLMKSWGNHEGYHYAHDYPNAVVEQQ-YMPDVLVGREYY 424 Query: 417 FPTNRGLEGKIGEKL 431 P +RG E +IG +L Sbjct: 425 HPNSRGYEREIGPRL 439 >UniRef50_O48696 F3I6.23 protein n=4 Tax=Embryophyta RepID=O48696_ARATH Length = 525 Score = 339 bits (869), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 191/414 (46%), Positives = 258/414 (62%), Gaps = 9/414 (2%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 S QPL+ RMRP L +GQ HLL+ L A+E+ L S++ WGPPGTGKT++A+ Sbjct: 96 SHRQHQPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAK 155 Query: 69 -VIARYANADVER---ISAVTSGVKEIREAIERA-RQNRNAGRRTILFVDEVHRFNKSQQ 123 +I + + R +SAVTSGVK++R+A+E A R N +RT+LF+DEVHRFNKSQQ Sbjct: 156 SLINSSKDPSLYRFVSLSAVTSGVKDVRDAVESAKRLNLEGRKRTVLFMDEVHRFNKSQQ 215 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLP IEDG+I FIGATTENPSF L + LLSR RV L L +E +L +A++D R Sbjct: 216 DTFLPVIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSER 275 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 G + + D +A +GDAR ALN LE+ A MA V+ + E Sbjct: 276 GLPNS-VEVDDSVIEFLANNCDGDARVALNALEISATMATTRAGTDAVVSIDDAKEALQC 334 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 + +D G++ Y+LISALHKS+RG +AA+YW AR++ G +PLY+ARR + ASED+ Sbjct: 335 KHLAYDKAGEQHYNLISALHKSMRGGDANAAIYWLARMLEGGEEPLYIARRLIRFASEDI 394 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G ADP A+ A+A + +G E +AQ YLA APKS AVY A AA ++ Sbjct: 395 GLADPSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSIAVYRAIGAAQKVVKDS 454 Query: 364 --PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 + VP+HLRNAPTKLMKE+GYG+EY Y + ++ AAG+ Y PP + ++ Sbjct: 455 VGQNEGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSS-AAGQTYLPPSLLHHKF 507 >UniRef50_Q6MPI4 ATPase, AAA family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI4_BDEBA Length = 449 Score = 337 bits (864), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 174/421 (41%), Positives = 256/421 (60%), Gaps = 6/421 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PL+ +RP+ L GQQ L L + + G+L S+I+WGPPGTGKTT A ++++ Sbjct: 27 PLSEILRPKTLDDIFGQQKTLGPQSKLGQMLRKGYLPSLIIWGPPGTGKTTFALALSQHF 86 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 NA ++AV SG K +RE E + R ++TILFVDE+HRFNK+QQD LP +E G Sbjct: 87 NAHYVHLNAVDSGAKALREVGEAGKDRRLQYQQKTILFVDEIHRFNKAQQDVLLPFVEKG 146 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + +GATTENPS+ELN ALLSR RV + + LS +D+ +++ +A +T D +L Sbjct: 147 DLVLVGATTENPSYELNRALLSRCRVVIFERLSEDDLNKIVKRA---ETHYAKPLDKILT 203 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 ++ + + E +GDARR +N+LE++ + D+ +L + E+ + +D + Sbjct: 204 EDAHKNLLEYSDGDARRLINSLEILYTFTK-DEVEGPLLDVNDMRELLQQNPLGYDKNSE 262 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KS+RGS PDAA+Y+ AR++ G DP+++ARR + +ASED+GNADPRA+ V Sbjct: 263 MHYDTISAFIKSIRGSDPDAAMYYLARMLDGGEDPVFIARRLIILASEDIGNADPRAISV 322 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 AIA +G EG ++Q YLA PKSNA Y A A + VP+HLR Sbjct: 323 AIAGLQAVEAIGLPEGAITLSQVTTYLASCPKSNASYMALHKARELVEKTRTLPVPLHLR 382 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 +A T L K++GYG++Y+Y H+ + + Y P E+ +T Y PT RG E I + L+W Sbjct: 383 SAKTALAKDLGYGRDYKYPHNYPTGWVE-QSYLPEEVEKTAIYEPTTRGFEKNIRDYLSW 441 Query: 434 L 434 + Sbjct: 442 M 442 >UniRef50_C8WQ98 AAA ATPase central domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ98_ALIAD Length = 447 Score = 335 bits (859), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 180/404 (44%), Positives = 252/404 (62%), Gaps = 3/404 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L + +G ++L+ L R IE L S+IL+GPPGTGKTT+AEVIAR Sbjct: 17 PLAYRMRPRSLDEMVGHENLVGRDGILRRMIERDRLMSIILYGPPGTGKTTIAEVIARQT 76 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AVTSG+ ++R+A+E AR+ R+ RRT++F+DE+HRFNKSQQDA LPH+E G Sbjct: 77 KARFIPLNAVTSGIADVRKAVETAREERDLYARRTVVFLDEIHRFNKSQQDALLPHVEAG 136 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 ++ +GATTENP F++N+ALLSR+ V+ L+ LS +DI +++ A+ D+ RG G + L Sbjct: 137 LLSLVGATTENPYFDVNAALLSRSHVFRLEPLSPDDIGRLVDMAIADEERGLGRMRVRLH 196 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVD-DSGKRVLKPELLTEIAGERSARFDNKG 252 + RR + GDARRALN LE+ A A V D + E+ + R+D G Sbjct: 197 PDARRVLTLQARGDARRALNLLELAAFAARVGPDGATEIGMREVEAALEASGGPRYDRAG 256 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD ISA KSVRGS +AA+ W A+++ G DP ++ARR + +A+EDVG ADP A+ Sbjct: 257 DDHYDTISAFIKSVRGSDVNAAMLWLAKMLEGGEDPAFIARRLMILAAEDVGMADPNALP 316 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A++ W +G E +A+ YLA APKSN Y A AL D R +VP+HL Sbjct: 317 IAVSGWQAAMAIGMPEARIVLAEVTAYLAKAPKSNHAYMAINRALDDVRSGLPLEVPLHL 376 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 R+ K K +G+G+ Y Y HD Y + Y+P + YY Sbjct: 377 RSTAYKGAKALGHGEGYLYPHDYPGHYVE-QNYWPIGVEPRAYY 419 >UniRef50_D0N7J3 ATPase WRNIP1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N7J3_PHYIN Length = 499 Score = 334 bits (857), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 190/416 (45%), Positives = 250/416 (60%), Gaps = 16/416 (3%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 D + PLA RMRP +L +GQ+ LL G L IEA + +MILWGPPG GKTTLA V Sbjct: 80 DASAVPLAERMRPTDLNDLVGQEELLGPGSLLSTLIEADRVPNMILWGPPGCGKTTLAHV 139 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLP 128 I++ +S TS ++++A++RAR R RRTI+FVDE+HRFNK QQD FLP Sbjct: 140 ISKKTGCKFISLSGATSKAGDMKDAVDRARGERKMFRRRTIVFVDEIHRFNKIQQDFFLP 199 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 +EDGTIT IGATTENPSFE+N+ALLSR RVY LK + E IE++L +A+ G Sbjct: 200 PVEDGTITLIGATTENPSFEVNNALLSRCRVYSLKKHTPESIERILRRALT------AGD 253 Query: 189 DIVL--PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE---IAGE 243 + DE + + GDAR ALN LEM A + D KRVL+ + A Sbjct: 254 QMSFEAEDEAIKYLTTQCAGDARAALNCLEMAIQTAPI-DPDKRVLRVSAIHVQHCFAHR 312 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 ++ +D D YD+ISALHKS+RGS +A LYW AR++ G +PLYVARR + +ASEDV Sbjct: 313 QTLFYDRNADMHYDVISALHKSIRGSDENATLYWLARMLEGGENPLYVARRLIRVASEDV 372 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA---LADA 360 G A P + +A++A+ G E + +A LA APKS VY A+K A + D Sbjct: 373 GLAAPELLPLAVSAYQAAHFTGMPECDVVLAHVATMLARAPKSIEVYAAYKRAKQSIHDW 432 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 + DVP+H+RNAPTKLMKEMGY + Y+Y + Y P E+ T ++ Sbjct: 433 GKGALPDVPMHIRNAPTKLMKEMGYAKGYKYNPHYTAEELKDQTYLPDEMVDTNFF 488 >UniRef50_B3E131 ATPase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E131_METI4 Length = 454 Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 170/423 (40%), Positives = 263/423 (62%), Gaps = 8/423 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PL+ +MRP L + +GQ+ +L GKPL R I+A + S+IL+GPPGTGKTTLAE+IA+ Sbjct: 21 PLSTKMRPRTLEELVGQEDILLPGKPLRRLIDADRIQSLILYGPPGTGKTTLAEIIAKKT 80 Query: 75 NADVERISAVTSGVKEIREAI-ERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + R++AV +GV +IR+ I + A + + + T+LF+DE+HRFNKSQQD LP +E G Sbjct: 81 KSFFARLNAVEAGVSDIRKVIGQAALRWKKEKKHTLLFIDEIHRFNKSQQDVLLPDLETG 140 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATT NP F L + LLSR+ ++ K LS + +E +L +A+ DK RG G ++ + Sbjct: 141 IIKLIGATTHNPCFYLTAPLLSRSHLFEFKPLSKQSLETLLLRALTDKERGLGNYEVSIE 200 Query: 194 DETRRAIAELVNGDARRALNTLEM--MADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 E + + L GDARR LN LE+ ++ + E + +L E + + ++ R+D+ Sbjct: 201 KEAKEFLLNLCEGDARRLLNYLEIAVLSSLQE-NQPAPVILNIETIQNLVQKKIPRYDHG 259 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 D YD ISA KS+RGS PD+ALYW A++I+AG DP ++ARR + +A+ED+G A+P+ + Sbjct: 260 EDEHYDTISAFIKSIRGSDPDSALYWLAKMISAGEDPRFIARRLVILATEDIGLANPQGL 319 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A AA++ ++G EG +A A +YLA +PKSN+ Y A A+ + +VP Sbjct: 320 PIATAAFEAIEKIGMPEGRIPLAFATLYLALSPKSNSAYKAIDKAIEWIEKEATVEVPQM 379 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 L+++ K++G G Y Y+H+ +A + P +Y PT+RG E + E+L Sbjct: 380 LKDSHYSGAKKLGKGVGYLYSHNFRDAVSPQRYGIEP----GTFYVPTDRGKEKEFKERL 435 Query: 432 AWL 434 ++ Sbjct: 436 EYI 438 >UniRef50_Q17P00 Werner helicase interacting protein n=3 Tax=Endopterygota RepID=Q17P00_AEDAE Length = 560 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 188/427 (44%), Positives = 257/427 (60%), Gaps = 30/427 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA--- 71 PLA +MRP+ L+ YIGQ+ ++ L E + SMILWGPPG GKTTLA +IA Sbjct: 137 PLAEKMRPDELSDYIGQEQIIGKNTVLRTLFEKNTIPSMILWGPPGCGKTTLAHIIAAHC 196 Query: 72 -RYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 ++ + ++SA SGV +++EA++ A+ + R+TI+F+DE+HRFNK QQD FLPH+ Sbjct: 197 KKHGSMKFVKLSATMSGVNDVKEAVKLAKNDLAFKRKTIMFMDEIHRFNKLQQDIFLPHV 256 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM-EDKTRGYGGQD 189 E GTIT IGATTENPSF LNSALLSR RV +L+ L E + ++L +A+ + KT + + Sbjct: 257 ESGTITLIGATTENPSFSLNSALLSRCRVIVLEKLGVEAVMKILKRALPQYKTVMFENNN 316 Query: 190 IVLPD--------------ETRRAIAELVNGDARRALNTLEM-MADMAEVDDSGKRVLKP 234 V PD ET R +AE+ +GDAR ALN+L++ + +A D + LK Sbjct: 317 RV-PDIRGLPFVPRMMISAETIRWLAEICDGDARIALNSLQLALNTVAARQDEEESALKR 375 Query: 235 ELLTEIA-GERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYV 291 L EI G + + +D KGD+ Y+LISALHKS+R S +AALYW +R++ +G DP Y+ Sbjct: 376 ISLDEIKEGIKKSHLMYDRKGDQHYELISALHKSIRASDDNAALYWCSRMLVSGEDPRYL 435 Query: 292 ARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYT 351 RR + +ASED+G AD A+ VA + VG E + IA VYLA APKS VY Sbjct: 436 VRRMIRMASEDIGLADTNALTVATSTLAAVQAVGMPEADCIIAHCAVYLARAPKSREVYN 495 Query: 352 AFKAALADARER--PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPE 409 AF A + P VP+HLRNA TKLMK + YG Y H + +G Y P Sbjct: 496 AFNRCKASIGQNKGPMPSVPLHLRNATTKLMKSLKYGAGYNLQHKD----ESGLQYMPEG 551 Query: 410 IAQTRYY 416 + Y+ Sbjct: 552 LENENYF 558 >UniRef50_A5GNS9 ATPase related to the helicase subunit of the Holliday junction resolvase n=46 Tax=cellular organisms RepID=A5GNS9_SYNPW Length = 737 Score = 327 bits (838), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 182/418 (43%), Positives = 260/418 (62%), Gaps = 4/418 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP NL +++GQ +LA G+ L RAI A + ++IL GPPG GKTTLA +IA + Sbjct: 23 PLADRLRPRNLDEFVGQGAILAEGRLLRRAIAADRVGNLILHGPPGVGKTTLARIIANHT 82 Query: 75 NADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AV +GVK++R + A Q G RTILF+DEVHRFN +QQDA LP +E+G Sbjct: 83 RAHFSSLNAVLAGVKDLRAEVSEAGQRLERHGLRTILFIDEVHRFNSAQQDALLPWVENG 142 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+T IGATTENP FE+N AL+SR+R++ L++L+ D+ ++L A++D RGYG + I + Sbjct: 143 TLTLIGATTENPYFEVNKALVSRSRLFRLQALTPGDLSKLLNSALKDPERGYGDRKIKIE 202 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 E + ++ +GDAR LN LE+ D D++G + + E +R+ +D +GD Sbjct: 203 PEAAAHLVDVASGDARSLLNALELAVDSTPADENGLVRIDLGIAEESIQQRAVLYDKQGD 262 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 +D ISA KS+RGS PDAAL+W AR++ AG +P ++ RR L A EDVG ADP+A+ V Sbjct: 263 AHFDTISAFIKSIRGSDPDAALFWLARMVEAGENPRFIFRRMLISAGEDVGLADPQAVVV 322 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A F R+G EG +AQA +YLA KSN+ F+ AL R DVP HLR Sbjct: 323 VEACAAAFERIGLPEGLYPLAQAALYLAGTDKSNSTGGFFE-ALRQVRSAQRQDVPTHLR 381 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 +A + G GQ YRY H + A + Y P + ++ P+++G EG+ E++ Sbjct: 382 DA-NRDGDAFGDGQGYRYPHAFREHWVA-QQYLPDALQGEAFWAPSHQGWEGQRRERI 437 >UniRef50_Q2J818 Recombination protein MgsA n=12 Tax=Bacteria RepID=Q2J818_FRASC Length = 519 Score = 327 bits (837), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 194/445 (43%), Positives = 266/445 (59%), Gaps = 28/445 (6%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAAR+RP L + +GQ+HLL G PL R +E G S++LWGPPGTGKTTLA +++R Sbjct: 52 PLAARLRPRTLDEVVGQRHLLGPGSPLRRLVEGGATTSVVLWGPPGTGKTTLAHIVSRAT 111 Query: 75 NADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +SAVT+GVK++R I+ AR+ +G RT+LF+DEVHRF ++QQDA LP +E G Sbjct: 112 GRRFRELSAVTAGVKDVRAVIDEARETLSTSGARTVLFIDEVHRFTRTQQDALLPSVERG 171 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T + ATTENP F + S LLSR+ + L+ L+ +DI VLT+A+ D RGY G+ + + Sbjct: 172 WVTLVAATTENPFFSVVSPLLSRSLLLTLEPLTDDDIRGVLTRALRDP-RGYDGR-LSVS 229 Query: 194 DETRRAIAELVNGDARRALNTLEMMAD------------------------MAEVDDSGK 229 DE R + L GDARRAL TLE A+ AE + + Sbjct: 230 DEAREHVVRLAGGDARRALTTLEAGAEALLEAHECESGPGGKAGAGADAGADAEAFVNPR 289 Query: 230 RVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPL 289 L +LL + R+D GD+ YD+ISA KS+RG DAAL++ AR++ AG DP Sbjct: 290 PRLDLDLLERAVNRAAVRYDRSGDQHYDVISAFIKSMRGGDVDAALHYLARMLEAGEDPR 349 Query: 290 YVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV 349 +VARR + +ASED+G ADP A+ VA+AA VG E A+AQA+++LA APKSNAV Sbjct: 350 FVARRMIILASEDIGMADPGALGVAVAASQALEFVGLPEARLALAQAVIHLALAPKSNAV 409 Query: 350 YTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPE 409 A AA +D R VP HLR+A + + +G+G YRY H EA + Y P Sbjct: 410 IRAIDAATSDVRAGRAGPVPAHLRDAHYRGARRVGHGAGYRYPH-EAPGNVVRQQYPPDG 468 Query: 410 IAQTRYYFPTNRGLEGKIGEKLAWL 434 + T YY P+ G E + +++ L Sbjct: 469 LTSTDYYQPSGNGFERRAADRVHEL 493 >UniRef50_B9HZJ7 Predicted protein n=3 Tax=rosids RepID=B9HZJ7_POPTR Length = 553 Score = 327 bits (837), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 188/420 (44%), Positives = 248/420 (59%), Gaps = 21/420 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP + IGQ LL+ L AI + S+ILWGPPGTGKT++A I Sbjct: 126 EPLAERMRPRTIDDVIGQDLLLSQNSLLRSAIRCSRIPSIILWGPPGTGKTSIARAIVTS 185 Query: 74 ANAD------VERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAF 126 AN+ +SAVT GVK+ R+A E AR+ + +RT+LF+DEVHRFNKSQQD+F Sbjct: 186 ANSQGSSSYRFVSLSAVTCGVKDARDAFEDARKFKLKNSKRTVLFLDEVHRFNKSQQDSF 245 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY- 185 LP IEDGTI FIGATTENPSF L + LLSR RV L L ++ +L +A+ D +G Sbjct: 246 LPVIEDGTIVFIGATTENPSFHLVTPLLSRCRVLTLSPLKPHHVQTILKRAVNDPDKGLS 305 Query: 186 ---GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA--EVDDSGKRVLKPELL--- 237 G + + ++ ++ +GDAR ALN LE+ A A V G L L Sbjct: 306 KSLGSLGVDVSEDAVEFLSTNCDGDARVALNALEISAATAAARVGSDGDLRLASVALDDA 365 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E + +D G+ Y+LISALHKS+RGS DA++YW R++ G PLY+ARR + Sbjct: 366 KEALQSKHLAYDRAGEEHYNLISALHKSMRGSDADASIYWLVRMLEGGEQPLYIARRLVR 425 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVG ADP A+ A+A + +G E +AQ + YLA APKS +VY A AA Sbjct: 426 FASEDVGLADPLALNQAVACYQACHFLGMPECNVILAQCVAYLALAPKSISVYRAMGAAQ 485 Query: 358 ADARERPDYD--VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 RE + VP+HLRNAPTKLMKE+GYG++Y Y D A + + PP + ++ Sbjct: 486 KVVRESVGQNEGVPLHLRNAPTKLMKELGYGKDYIYTPDNPT---ANQSFLPPSLQGYKF 542 >UniRef50_B1ZVQ2 AAA ATPase central domain protein n=10 Tax=Bacteria RepID=B1ZVQ2_OPITP Length = 448 Score = 324 bits (831), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 182/421 (43%), Positives = 251/421 (59%), Gaps = 11/421 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLAARMRP LA+ +GQ H+L G LPR + S+I +GPPG GKT++AE IA+ Sbjct: 27 QPLAARMRPRRLAEVVGQSHILKPGSLLPRLVAQNRFGSLIFYGPPGCGKTSIAEAIAQE 86 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N+ R++AV S V E+RE + AR+ A TILF+DE+HRFNKSQQD LP +E+G Sbjct: 87 TNSRFVRVNAVMSNVAELREILHSARRLPQAS--TILFIDELHRFNKSQQDLLLPDVEEG 144 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+ IGATT NP F +N LLSR+ ++ L+ LS + VL +A+ D+ RG G + + Sbjct: 145 TVRLIGATTHNPGFYVNPPLLSRSHLFRLEPLSPAAVTGVLKKALADEERGLGARKVTAD 204 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ +A L +GD RRALN LE++ + + + G V+ P L A ER R+D D Sbjct: 205 DKVLADLAVLCDGDLRRALNALEVL--VLGLPEGG--VITPAELEVFARERRIRYDADED 260 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KS RGS PDAALYW A+++ G DP ++ARR + +ASEDVG ADP+A+ + Sbjct: 261 EHYDTISAFIKSCRGSDPDAALYWLAKMLAGGEDPRFIARRLVILASEDVGLADPQALPL 320 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +AA +G E E +A A +Y+A A KSN+ A A +E+P +P LR Sbjct: 321 TVAAHHAVDFIGLPEAELTLAHATLYIATAAKSNSATLALGEAHRALKEQPVQTIPAALR 380 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA- 432 + + K +G GQ Y Y+HD +G+ Y + Y P G E KI ++LA Sbjct: 381 SKSGQANKRIGQGQGYLYSHDHQENI-SGQDYLEKPLT---LYTPKPVGWEAKIVDRLAR 436 Query: 433 W 433 W Sbjct: 437 W 437 >UniRef50_Q1D8G6 ATPase, AAA family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D8G6_MYXXD Length = 444 Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 181/432 (41%), Positives = 260/432 (60%), Gaps = 6/432 (1%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 N F PLA RMRP ++IGQ HLL G+PL + IE + S + WGPPG GKTTLA ++ Sbjct: 15 NRFAPLAERMRPRTPDEFIGQSHLLGPGRPLRQLIERKAIVSSLFWGPPGVGKTTLARMM 74 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPH 129 A +A+ +SAV+ G+ IRE + A + RN RRT+LFVDE+HR+ K+ Q+ LPH Sbjct: 75 ATGVDAEFVILSAVSDGIPRIREVVAEAERLRNQYSRRTVLFVDEIHRWAKNVQEQALPH 134 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E G +GATTEN SFE+ AL+SR RV+ LK L+ DI+ LT+A+ D RG G ++ Sbjct: 135 VESGLFVLLGATTENVSFEVRPALVSRCRVFQLKELTVADIQSALTRALGDSKRGLGARN 194 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 + + + +A+ GD R+AL LE+ A + D + + PE E G +R D Sbjct: 195 LSVGEGALTLLAKGGVGDVRKALGALELAASLTA--DGAE--ITPETAREAVGTSLSRHD 250 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 GD+ YDL+SAL KS RGS A++W A+++ G D + RR IA EDVG A P Sbjct: 251 KDGDQHYDLLSALQKSCRGSNVQGAVFWAAKLLQTG-DVASLWRRLKVIAVEDVGMAMPE 309 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ V + F +G EG +A A+V LA A KSN Y A AALA +E P+ + P Sbjct: 310 AISVVRDCEEAFHAMGMPEGRICVAHAVVLLATAKKSNRAYAALDAALAALQEHPNAEPP 369 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 +H+RNAPT+LMKE+G+G+ Y+ + + Y G+ Y P + ++ +Y P+ G E +I E Sbjct: 370 LHIRNAPTELMKELGHGKGYQTPWNFKDHYVPGQTYLPAPLERSVFYRPSKEGYEAEIHE 429 Query: 430 KLAWLAEQDQNS 441 +++ +D+ S Sbjct: 430 RMSHWWREDKAS 441 >UniRef50_C0R1V7 Holliday junction resolvase helicase subunit-like ATPase n=2 Tax=Brachyspira RepID=C0R1V7_BRAHW Length = 431 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 169/435 (38%), Positives = 261/435 (60%), Gaps = 9/435 (2%) Query: 6 LDFSD--NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 DF + N F+P+A RMRP + + GQ H+L K L + I+ + SM+ +GPPG GK Sbjct: 2 FDFEEDINNFKPMAERMRPLTIEEVFGQHHILDKNKTLRKMIDNDKITSMVFFGPPGVGK 61 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ 123 +T+A +IA+ ++ +++AV S V EIREAI++A +N ++TILF+DE+HRFNKSQQ Sbjct: 62 STVASIIAKKTKSEYIKLNAVLSNVSEIREAIKKAEKNLENRKKTILFIDEIHRFNKSQQ 121 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 DA LP +E+G+I IG+TT NP F LN+ALLSR ++ ++L DI++ + +A+EDK R Sbjct: 122 DALLPAVENGSIILIGSTTLNPYFYLNNALLSRIMLFEFRNLDDNDIKEAVLKAIEDK-R 180 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV-LKPELLTEIAG 242 G G D+ + DE I +GD R+A LE ++D+S +++ + E++ ++ Sbjct: 181 GLGEYDVDVEDEAVNLIVRYSHGDVRKAFTYLEASYLATQIDESKEKLTITEEIVRDVTS 240 Query: 243 ERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 ++S FD D Y+ ISA KSVRGS P+AA+Y+ AR++ +G DP YVARR +ASED Sbjct: 241 KQSISFDE--DEHYNTISAFIKSVRGSDPNAAIYYLARMLESGEDPRYVARRLCILASED 298 Query: 303 VGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE 362 +G A+P AM +A + +G EG +A+ +YLA PKSN+ Y A A+ D R Sbjct: 299 IGLAEPNAMNIASSLVSIIDFIGMPEGRIPLAEVTIYLALCPKSNSAYNAINKAIRDIRN 358 Query: 363 RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 Y +P +LR+ + +EY+Y HD Y + + + YY P + G Sbjct: 359 GELYSIPNYLRDNHSATFDRKS-DEEYKYPHD--YPYHIVKQDYLEHGVKKEYYEPVDIG 415 Query: 423 LEGKIGEKLAWLAEQ 437 E ++ ++ W+ + Sbjct: 416 EERELKKRYEWIIKH 430 >UniRef50_D1BNC9 AAA ATPase central domain protein n=4 Tax=Veillonellaceae RepID=D1BNC9_VEIPT Length = 433 Score = 322 bits (826), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 180/418 (43%), Positives = 255/418 (61%), Gaps = 6/418 (1%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 NT++PL RMRP L GQ+ + G L +E + SM+ +GP GTGKTTLA +I Sbjct: 11 NTYEPLPVRMRPTKLDHLYGQEKAIGKGTFLRAMVEKDTIPSMLFYGPCGTGKTTLAGII 70 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPH 129 A+ +N+ ++A +G+ E+R IE AR+ R+ +RTILF+DE+HRFNKSQQD LP Sbjct: 71 AKVSNSHFVNLNATNAGIGELRTIIEDARKRVRSLQQRTILFLDEIHRFNKSQQDVLLPC 130 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +EDGTI IGATTENP FE+N LLSR R+ L++L+ + I Q+L +A+ D+ G G + Sbjct: 131 VEDGTIILIGATTENPFFEVNRPLLSRLRLITLEALTPKAIGQILRRAITDEAVGLGKRH 190 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 + + DE + VNGD R ALN LE A M V D G + E+L ++ G R +D Sbjct: 191 LQVTDEVLEDVGIFVNGDGRMALNILEQAAAM--VPDEG--TITIEVLEKVVGRRIYTYD 246 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 KGD YD ISA KS+RGS A +++ AR+I AG DP ++ARR + A+EDVG ADP+ Sbjct: 247 KKGDSHYDTISAFIKSMRGSDVQATVHYLARMIEAGEDPNFIARRIVICAAEDVGLADPQ 306 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ +A AA VG E +++A Y+A APKSN+ Y A AA++D R + VP Sbjct: 307 ALILANAAAQAAHMVGFPEARIILSEAACYVALAPKSNSAYVAIDAAISDVRHKDCGQVP 366 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 HL+++ ++G+G+ Y+YAH+ N Y + Y P + YY RG E ++ Sbjct: 367 DHLKDSHYSGASKLGHGKAYKYAHNYPNGYVKQQ-YLPTPLIDATYYKGIKRGTEEQL 423 >UniRef50_A5V6U8 Recombination protein MgsA n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6U8_SPHWW Length = 444 Score = 321 bits (823), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 181/423 (42%), Positives = 247/423 (58%), Gaps = 11/423 (2%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 D +PLA R+RP + +GQ+HL PL R + A L S+I WGPPG GKTTLA Sbjct: 16 CDVETRPLAERLRPTRIEDVVGQEHLTGPDAPLARMVAARRLSSIIFWGPPGIGKTTLAR 75 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLP 128 ++A E SA V ++ A A+++ G+RT+LF+DE HR ++ + LP Sbjct: 76 LLADLVGMRFEAFSATDVTVAGLKAAYAEAKRHLRMGKRTVLFLDESHRAARNITETLLP 135 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 +EDGTIT I ATTE PSF L + SRARV L L T + Q+L D+ + G Sbjct: 136 VMEDGTITAILATTEAPSFTLPKGITSRARVLTLNPLDTGGLTQLL-----DRAEQHCGV 190 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARF 248 + L DE R A+ E GD R LN +E + D ++ L PE L I R A + Sbjct: 191 QLNLTDEARIALFEQAGGDGRYFLNMVEDLLDAPAMEP-----LAPEDLRRILSRRIANY 245 Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 D +GD Y+L SA KS+RGS PDAALY+ AR++ AG DP ++ RR L +ASE+V ADP Sbjct: 246 DRQGDGHYELASAFQKSIRGSDPDAALYYGARLVQAGEDPRFILRRLLVMASEEVAMADP 305 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDV 368 + V AA D F VG E + A+AQAIV +A APKSNAVY A+K A+A A P+ Sbjct: 306 TILGVVAAALDTFQHVGMPEAKYALAQAIVAVATAPKSNAVYLAWKQAMALAEATPNVRP 365 Query: 369 PVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIG 428 P + NAPT+L + +G+ +Y Y+HD NA++A + Y+P E+ + R+Y P RG E I Sbjct: 366 PRRILNAPTELHRSLGFKTDYEYSHDWPNAFSA-QNYWPDELGRHRFYAPNERGFEATIK 424 Query: 429 EKL 431 ++ Sbjct: 425 RRV 427 >UniRef50_A5WC21 Recombination protein MgsA n=9 Tax=Bacteria RepID=A5WC21_PSYWF Length = 439 Score = 321 bits (822), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 187/430 (43%), Positives = 258/430 (60%), Gaps = 17/430 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L + IGQ HLLA G P+ R +E GHL S+IL G G GKTT+A ++A Sbjct: 14 PLAQRLRPKRLDEVIGQTHLLAPGAPIQRFVEHGHLPSLILHGEAGIGKTTIAMLLADAV 73 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGR---RTILFVDEVHRFNKSQQDAFLPHIE 131 +SA+ +GVK++RE ++ + G ++F+DE+HRFNK+QQDA L +E Sbjct: 74 GRPFYPLSAINTGVKQLREVLDAGSSSGQGGLDFASPVVFIDEIHRFNKAQQDALLGAVE 133 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM-EDKTRGYGGQDI 190 G IT IGATTENPSF +N+ALLSR +VY L+ L I ++L +A+ +D+ D+ Sbjct: 134 SGDITLIGATTENPSFSVNNALLSRCQVYRLQPLDDTQIGELLQRALSQDEFLSQLSIDL 193 Query: 191 -VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR--VLKPELLTEIAGERSAR 247 LP IA L GDAR+ALN LEM + D K+ V+ LL+ +A R Sbjct: 194 QALPQ-----IANLAQGDARKALNLLEMAV---QASDHSKQPIVIDDALLSSVAQTTLQR 245 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D GD+ YD+ISA+ KSVRGS PDAALYW AR++ AG P ++ARR + +ASED+GNA+ Sbjct: 246 YDKDGDQHYDIISAMIKSVRGSDPDAALYWMARMLVAGEPPEFIARRLVILASEDIGNAN 305 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ +A AA +G E + Q +VYLA + KSN+ Y A A+ A++ Sbjct: 306 PNALLLADAALRSVKAIGMPEARIILGQVVVYLATSAKSNSTYLAINKAMQLAQQD-QSP 364 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP+HLRN TKLM+ GYG+ Y Y HD N Y + Y P + TR+Y + E Sbjct: 365 VPMHLRNGVTKLMQSQGYGEGYIYPHDYPNHYQPQQ-YLPDNLVGTRFYEYADNQREQHS 423 Query: 428 GEKLAWLAEQ 437 + + WL Q Sbjct: 424 LQFMQWLQTQ 433 >UniRef50_C8W9U5 AAA ATPase central domain protein n=2 Tax=Atopobium RepID=C8W9U5_ATOPD Length = 443 Score = 321 bits (822), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 187/420 (44%), Positives = 258/420 (61%), Gaps = 19/420 (4%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAARMRP L Y+GQ+ + G L +AIE L S++L+GP GTGKTTLA +IA Sbjct: 18 PLAARMRPTTLDGYVGQEDAVGPGSWLRKAIEHDTLSSVLLYGPAGTGKTTLARIIAHTT 77 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +A+ +SA+T VK++R IE A AGRRTILF+DE+HRF +SQQDA L +ED Sbjct: 78 HAEFVEVSAITGTVKDLRREIEAAESRLLTAGRRTILFIDEIHRFTRSQQDALLHAVEDR 137 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + IGATTENP FE+NSAL+SR+RV L +LS I++++ +A+E + G G VL Sbjct: 138 IVVLIGATTENPYFEVNSALISRSRVVELHALSDNAIDELIQRALESED-GLAGA-FVLE 195 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDS--GKR----VLKPELLTEIAGERSAR 247 ++ R+ I L GD R AL +LE+ + M +V +S GK V+ + + E R Sbjct: 196 EDARKEIVTLAGGDGRAALTSLELASQMVDVPESADGKASEPLVITKQNVLEANPRRGLP 255 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D GD YD+ISA KS+RGS PDAALYW AR+I AG DP ++ARR + +ASED+GNAD Sbjct: 256 YDKAGDMHYDIISAFIKSMRGSDPDAALYWLARMIDAGEDPKFIARRIMILASEDIGNAD 315 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P+A+ +A AA+ +G E +AQA++Y+A APKSNA AAL + R P + Sbjct: 316 PQALLIAHAAFRSAEVIGYPECRINLAQAVIYMALAPKSNAAEAGIDAALHEVRTGPRRE 375 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEV---YFPPEIAQTRYYFPTNRGLE 424 VP +LR+ +E G Y Y H+ Y G + Y P + + ++ P+ RG E Sbjct: 376 VPSYLRDRTRPGSEEYG---NYLYPHN----YPGGWIEQRYLPEGLERGAFFSPSPRGWE 428 >UniRef50_Q6A8J0 Uncharacterized ATPase related to the helicase subunit of the holliday junction resolvase n=8 Tax=Actinobacteridae RepID=Q6A8J0_PROAC Length = 461 Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 193/435 (44%), Positives = 263/435 (60%), Gaps = 6/435 (1%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 S SLD + N PLA R+RP + + +GQQHLL G PL R E S+ LWGPPG Sbjct: 18 SGGSLD-TPNPDAPLAVRLRPRTIDEIVGQQHLLTPGSPLRRLAEGTGAMSVFLWGPPGV 76 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 GKTT+A V++ N ISAVT+GVK+IR ++ AR+ G+ T+LFVDEVHRF+K+ Sbjct: 77 GKTTIASVVSHATNRRFVEISAVTAGVKDIRRELDTARRQLALGQPTVLFVDEVHRFSKA 136 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQD LP +E+ T+T I ATTENPSF + S LLSR+ + LK L+ D+ +L +A+ D Sbjct: 137 QQDVLLPAVENRTVTLIAATTENPSFSVISPLLSRSLLLTLKPLTEADVSSLLDRALSDP 196 Query: 182 --TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 R + VL D+ R + +L GDARRAL LE A A + + ++++ Sbjct: 197 RGLRTESDRRYVLEDDARADLLQLAAGDARRALTYLEEAAAGASAAGTD--TITSQIVST 254 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + R+D GD+ YD+ISA KSVRGS DAAL++ AR+I AG DP ++ARR + +A Sbjct: 255 AVDRAAVRYDRDGDQHYDVISAFIKSVRGSDVDAALHYLARMIEAGEDPRFIARRLIILA 314 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SED+G A P +Q +AA +G E +AQA + A APKSNAV TA ALAD Sbjct: 315 SEDIGMAAPSVLQTCVAAAQAVQLIGMPEARLNLAQATIAAATAPKSNAVITAIDGALAD 374 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 R +VP HLR+A ++G+G YRYAH+ + A + Y P +IA TRYY PT Sbjct: 375 VRAGKGGEVPAHLRDAHYSSAHDLGHGVGYRYAHNFPHGVAKQQ-YLPDDIASTRYYDPT 433 Query: 420 NRGLEGKIGEKLAWL 434 + G E I ++L+ + Sbjct: 434 DHGNEAAIAQRLSQI 448 >UniRef50_D2RB58 Recombination factor protein RarA n=2 Tax=Gardnerella vaginalis RepID=D2RB58_GARVA Length = 462 Score = 317 bits (813), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 188/443 (42%), Positives = 268/443 (60%), Gaps = 15/443 (3%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAI---EAGHL---HSMILWGPPGTGKT 64 N +PLA RMRP ++ +GQ H L G PL R G L S++L+GPPG GKT Sbjct: 14 NVTRPLAVRMRPSSIEDVLGQSHALKEGSPLRRLANPQSKGSLTAPSSVVLFGPPGVGKT 73 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQ 123 TLA ++AR + E +SAVTSGVK++R ++RA + + G+ T+LF+DEVHRF+KSQQ Sbjct: 74 TLAYIVARQSGRVFEELSAVTSGVKDVRAVLDRAHERLVSNGQETVLFIDEVHRFSKSQQ 133 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 DA LP +E+ +TFIGATTENPSF + LLSR+ V L SLS ED+ ++ +A+ + Sbjct: 134 DALLPSVENRDVTFIGATTENPSFSIIKPLLSRSVVVKLASLSVEDLHTLIERALTSEN- 192 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA-----DMAEVDDSGKRVLKPELLT 238 G Q + + D+ +I L GDAR+ L LE A D+A K V+ ++++ Sbjct: 193 GLNNQ-LKIDDDAIDSIIRLSGGDARKTLTILEAAAGAVTGDVALQHGKKKPVITDDIVS 251 Query: 239 EIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAI 298 + + R+D GD YD+ISA KS+RGS DA+L++ AR++ AG DP ++ARR + Sbjct: 252 NVMDTTTVRYDKDGDDHYDVISAFIKSMRGSDVDASLHYLARMLRAGEDPRFIARRIMIA 311 Query: 299 ASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALA 358 A+E+VG A P+ +QV +AA +G E +++A++ +A APKSNA Y A AL Sbjct: 312 AAEEVGMAAPQILQVTVAAAQAVALIGMPEARIILSEAVIAVATAPKSNASYNAINKALQ 371 Query: 359 DARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP 418 D VP+HLRNAPT LMK G Y+YAHD A A+ + Y P E+ YY P Sbjct: 372 DVDAGNIGQVPLHLRNAPTALMKSWGNHDGYKYAHDYPGAVASQQ-YMPDELVGREYYQP 430 Query: 419 TNRGLEGKIGEKLAWLAEQDQNS 441 +NRG E ++ ++L+ + NS Sbjct: 431 SNRGYEHELTQRLSQIRAILHNS 453 >UniRef50_B5JJN9 ATPase, AAA family protein n=2 Tax=Verrucomicrobia RepID=B5JJN9_9BACT Length = 496 Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 175/421 (41%), Positives = 248/421 (58%), Gaps = 10/421 (2%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 N QPLAAR+RP +L++ +GQ+H+LA GK LPR +EA S++ +GPPG GKT++AE I Sbjct: 71 NKRQPLAARLRPRSLSEVVGQEHILAPGKLLPRLVEANTFGSLLFYGPPGCGKTSMAEAI 130 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A + RI+AV S V E+RE + AR R + T+LF+DE+HRFNKSQQD LP + Sbjct: 131 AGETKSRFVRINAVMSNVAELREILGIAR--RMEDKDTVLFIDEIHRFNKSQQDLLLPDV 188 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G I IGATT NP F +N+ LLSR+ ++ L + + L +A+ D+ RG G + I Sbjct: 189 EAGNIRLIGATTHNPGFYVNAPLLSRSHLFRLNPHDVDTVAATLAKALTDEERGLGERKI 248 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 +A+L +GD RR LN LE++A +++ G+ + E + A ER R+D Sbjct: 249 TAVAGVLEGLAKLCDGDLRRGLNALEVIA--MGLEEGGE--ITEESVGVFASERQIRYDA 304 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 D YD ISA KS+RG +PD ALYW A+++ G DP ++ARR + ASEDVG AD A Sbjct: 305 DEDEHYDTISAFIKSMRGGSPDGALYWLAKMLKGGEDPRFIARRLVVFASEDVGLADSGA 364 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A+A VG E +A + Y+A APKSN+ Y+A ALA P +VP+ Sbjct: 365 LSLAVATQQACDFVGMPECRINLAHCVSYMAAAPKSNSAYSALAKALAAIEAGPVQEVPL 424 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 LR+ K K +G ++YRY+HD A + E P R+ G E +I ++ Sbjct: 425 WLRDKGGKASKALGNSKDYRYSHDFAENISGQEYMVEP----MRFLELNRVGEETEIAKR 480 Query: 431 L 431 L Sbjct: 481 L 481 >UniRef50_B2KBM0 AAA ATPase central domain protein n=2 Tax=Elusimicrobia RepID=B2KBM0_ELUMP Length = 416 Score = 315 bits (807), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 177/424 (41%), Positives = 246/424 (58%), Gaps = 24/424 (5%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAA M P+NL + GQ+H++ G+ L R IE+ + S + +GPPG GKT LA IA Sbjct: 9 PLAAAMAPKNLDDFAGQKHVIGPGRMLRRMIESDTIKSAVFFGPPGVGKTALARFIASKT 68 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAG---RRTILFVDEVHRFNKSQQDAFLPHIE 131 A ++A +GV +I++ IE A++ RN +RT++ +DE+H FNK+QQD LP +E Sbjct: 69 EAVTVELNAAAAGVGDIKKVIEEAKERRNDTFLEKRTLVVLDEIHHFNKTQQDVLLPSVE 128 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 G I IG TTENP F +N+ALLSR V+ K L +D+EQ+L + ++ K + Sbjct: 129 RGDIILIGLTTENPYFYINNALLSRFSVFEFKPLDAKDLEQILKRVLKIK-------EAK 181 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + + + NGDARR LN +++ D G + ++ E +R +D K Sbjct: 182 IQKDAKDFFITQANGDARRLLNAVDLAILTTAKDSDGIVNITMDVAKECMQKRHLNYDKK 241 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 GD YD+ISA KS+RGS PDAA+YW AR++ +G DP ++ARR L ASEDVGNA+P A+ Sbjct: 242 GDEHYDVISAFIKSMRGSDPDAAVYWLARMLESGEDPRFIARRILICASEDVGNAEPAAI 301 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A AA+ C +G E +AQA +Y+ACAPKSNA Y A AL + RE VP H Sbjct: 302 MLAEAAFKCAEVLGMPEVRIPLAQAAIYVACAPKSNASYIAVDEALKEVREGIQRRVPAH 361 Query: 372 LRNAPTKLMKEMGYGQE-YRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 LR+ G+ E Y+YAHD N Y E Y P ++Y PT G E I E+ Sbjct: 362 LRS---------GFKNEGYKYAHDYPNHYVKQE-YMP---KPKKFYEPTEIGKEKNIKER 408 Query: 431 LAWL 434 L L Sbjct: 409 LKKL 412 >UniRef50_A9U314 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U314_PHYPA Length = 498 Score = 315 bits (806), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 170/399 (42%), Positives = 247/399 (61%), Gaps = 19/399 (4%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 S + +PLA RMRP ++ +GQ HLL L I+A L S+I WGPPGTGKT+L + Sbjct: 73 SGKSLEPLAERMRPASVDLVVGQDHLLGPRCMLRNLIDANSLSSIIFWGPPGTGKTSLVQ 132 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLP 128 IAR + +SAV+SG+KE+RE +E A++ + G RT+L +DE+HRFNK+Q D FLP Sbjct: 133 TIARAVSYRFVALSAVSSGLKEVRETLEEAKRLQKFGERTLLLLDEIHRFNKAQLDVFLP 192 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY--- 185 +E G I IGATTENPSFE+N+ALLSR +V L L + I +L +A+ DK +G Sbjct: 193 CVEAGHIVLIGATTENPSFEINAALLSRCKVLTLNKLQPDHIRSLLDRAISDKEKGLMVS 252 Query: 186 ----GGQDIV-LPDETRRAIAELVNGDARRALNTLEM--MADMAEVDDSGKRVLKPELLT 238 +D++ + + +A+ +GDAR ALNTLE+ +A A + + +R + + Sbjct: 253 LAGSAAEDVIKVEQDALEFLADAADGDARVALNTLELAGLAAFASWESTPRRPCSADKAS 312 Query: 239 EIAGERSAR--------FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLY 290 I + +A+ FD G+ Y+++SAL KS+RG PDAA+YW AR++ G PLY Sbjct: 313 TILADANAKAIQRSYFLFDKSGEEHYNIVSALIKSMRGGDPDAAIYWLARMLEGGEGPLY 372 Query: 291 VARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY 350 +ARR + ASEDVG +DP+A+ +A+A + +G E +AQ + YL APKS VY Sbjct: 373 IARRLIRFASEDVGLSDPQALVLAVACYQACHFIGMPECNVNLAQCVTYLTLAPKSVVVY 432 Query: 351 TAFKAALADAR-ERPDYDVPVHLRNAPTKLMKEMGYGQE 388 A +AA + + + VP+HLRNAPT+LMK+ Y ++ Sbjct: 433 HAVEAAQRLVKGAKKNEPVPMHLRNAPTQLMKDHSYDRQ 471 >UniRef50_A6BBM0 ATPase, AAA family (Fragment) n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BBM0_VIBPA Length = 269 Score = 314 bits (805), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 152/218 (69%), Positives = 176/218 (80%) Query: 174 LTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLK 233 L QA+ DK RG G D +AELVNGDAR +LN LE++ DMAE + G++ + Sbjct: 52 LNQAINDKERGLGDTPANFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEIT 111 Query: 234 PELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVAR 293 +LL E+AGE+ +RFDNKGD +YDLISA+HKS+RGS PDAALYW AR+I AG DPLY+AR Sbjct: 112 LKLLAEVAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWAARMIAAGCDPLYIAR 171 Query: 294 RCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAF 353 R LAIASEDVGNADPRAMQVA++AWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY A+ Sbjct: 172 RLLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYVAW 231 Query: 354 KAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRY 391 K AL DA P+Y+VP HLRNAPT LMK+MGYG EYRY Sbjct: 232 KQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRY 269 >UniRef50_A6DHI5 ATPase, AAA family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHI5_9BACT Length = 430 Score = 314 bits (804), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 179/430 (41%), Positives = 250/430 (58%), Gaps = 21/430 (4%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 F +PLAA +RPE + GQ HL A G L R+IE S+I GPPGTGKT+LA Sbjct: 4 FDHPRVEPLAATLRPEGFGDFFGQGHLTAEGSLLRRSIENDCFSSIIFTGPPGTGKTSLA 63 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAF 126 +I+++ AD +SA+ S V E+R+A++ A + R +GR+T+LFVDE+HRFNK+QQD+ Sbjct: 64 SIISKHTEADFIALSAIDSSVSEVRKAVKAADEARKFSGRKTVLFVDEIHRFNKAQQDSL 123 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 L IE+GT+ FIGATT NP F L AL SR+ ++ LK L ++ +L M + Sbjct: 124 LKDIENGTVRFIGATTHNPGFYLTPALCSRSLIFTLKPLEASAVKSLLEAKMTKIMKALE 183 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSA 246 + + +E + ++E GDARRAL +E+ A+ D G E L E +S Sbjct: 184 AE-LQFDEEGLKFLSENCEGDARRALTVIELAVKTAQSDKIGL-----EELRECLQVKSY 237 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 ++D D Y+ SA KS+RGS PDAA+YW A ++ AG D ++ARR + ASEDVGNA Sbjct: 238 KYD--ADAHYNAASAFIKSMRGSDPDAAVYWLAYMLEAGEDIRFIARRIMIFASEDVGNA 295 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 DPRA+Q+A++A VG E ++QA+ Y A APKSNA Y A AL D + + Sbjct: 296 DPRALQLAVSASQAVDIVGMPEARIILSQAVTYCATAPKSNAAYKAVNLALEDVKNQRSQ 355 Query: 367 DVPVHLRNAPTKLMKEMGYGQE---YRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 +P+HLR+ + GY E Y Y H+ AY E Y E ++YY P RG Sbjct: 356 VIPMHLRDP-----RSSGYNPEEGDYVYPHNSKEAYVKQE-YIGVE---SKYYQPVERGY 406 Query: 424 EGKIGEKLAW 433 E KI E++ + Sbjct: 407 ETKIKERMDY 416 >UniRef50_A6QR70 Werner helicase interacting protein 1 n=6 Tax=Amniota RepID=A6QR70_BOVIN Length = 638 Score = 313 bits (803), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 187/438 (42%), Positives = 262/438 (59%), Gaps = 37/438 (8%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA MRP+ L ++GQ + L +EA + S+ILWGPPG GKTTLA +IA Sbjct: 198 KPLADTMRPDALQDFVGQGRAVGPETLLRSLLEASEVPSLILWGPPGCGKTTLAHIIANN 257 Query: 74 ANADVER---ISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 + R +SA ++ ++R+ I++A+ + R R+TILF+DE+HRFNKSQQD FLPH Sbjct: 258 SKKHSIRFVTLSATSAKTTDVRDVIKQAQNEKRFFKRKTILFIDEIHRFNKSQQDTFLPH 317 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME-------DKT 182 +E GTIT IGATTENPSF++N+ALLSR RV +L+ L E + +L +A+ D + Sbjct: 318 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAVVTILMRAVNSLGIQVLDSS 377 Query: 183 R-----GYGGQD-----IVLPDETRRAIAELVNGDARRALNTLEM--MADMAEVDDSGK- 229 R +GG +++ D+ +A L +GDAR LN L++ +A ++ GK Sbjct: 378 RPADPLSHGGNSSSESSVLIEDKAVDTLAHLSDGDARAGLNGLQLAVLARLSARKTFGKK 437 Query: 230 --------RVLKPELLTEIAGERS-ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 RVL E + +RS +D G+ Y+ ISALHKS+RGS AALYW R Sbjct: 438 GGQSYPPSRVLVTESDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDSSAALYWLGR 497 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DPLYVARR + ASEDVG ADP A+ A+A + +G E E +AQ +VYL Sbjct: 498 MLEGGEDPLYVARRLVRFASEDVGLADPSALTQAVATYQGCHFIGMPECEVLLAQCVVYL 557 Query: 341 ACAPKSNAVYTAFKAALADAR--ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS VY+A+ A R + P VP+HLRNAPT+LMK++GYGQ Y+Y + A + Sbjct: 558 ARAPKSVEVYSAYNNVKACLRGHQGPLPPVPLHLRNAPTRLMKDLGYGQGYKY--NPAYS 615 Query: 399 YAAGEVYFPPEIAQTRYY 416 + Y P E+ ++ Sbjct: 616 EPVEQEYLPQELRGVDFF 633 >UniRef50_UPI00016B2545 recombination factor protein RarA n=3 Tax=candidate division TM7 RepID=UPI00016B2545 Length = 400 Score = 313 bits (802), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 166/377 (44%), Positives = 235/377 (62%), Gaps = 11/377 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA MRP+ + IGQ+HLL+ GK L + I+ S+ILWGPPG+GKTTLA +IA+ Sbjct: 5 PLAELMRPQKIKDIIGQRHLLSEGKILYKIIKQKEPVSLILWGPPGSGKTTLARIIAKET 64 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 A+ +SAVTSG KEI IE ARQN N RT+LFVDE+HRF+K QQDAFLPHIE G Sbjct: 65 EANFMELSAVTSGKKEINNIIEIARQNWNLQLRTVLFVDEIHRFSKVQQDAFLPHIESGL 124 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 IT IGATTENPSFE+ + LLSR +V LK L +DI+Q+LT+A+E + ++ + Sbjct: 125 ITLIGATTENPSFEIITPLLSRVKVMTLKPLEDKDIQQILTKAIEKLAKSK-----LVTN 179 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 E+ +A + +GDAR AL LE++ + + GK + P+ + + +D G+ Sbjct: 180 ESIEYLAHISSGDARVALGNLELVLGI----NKGK--ITPDTINIALQKIPPTYDKNGNY 233 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 YD ISA KS+RGS +A LY+ AR+I AG DP ++ARR + ASED+G A+ +A Sbjct: 234 HYDTISAFIKSMRGSDVEATLYYLARMINAGEDPKFIARRMIIFASEDIGLVGNGALSLA 293 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 +A + RVG E + LA + KS V A + ++ P+ +P+HLRN Sbjct: 294 VATFQAVERVGLPEASYNLFHCATALARSNKSREVTNLMHNAQSLVKKFPNIQIPLHLRN 353 Query: 375 APTKLMKEMGYGQEYRY 391 + + + K++GYG+ Y++ Sbjct: 354 STSAITKDLGYGKNYKW 370 >UniRef50_D2AWQ0 Recombination factor protein RarA n=3 Tax=Bacteria RepID=D2AWQ0_STRRD Length = 436 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 194/418 (46%), Positives = 263/418 (62%), Gaps = 10/418 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP L + IGQ+HLL G PL R +EA S+ LWGPPGTGKTTLA V+A Sbjct: 17 EPLAVRMRPRGLDEVIGQRHLLGPGTPLRRLVEAEAPMSLFLWGPPGTGKTTLAYVVAGV 76 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIED 132 +SAV++GVKE+R AIE+AR+ +GR+T+LFVDEVHRFNK+QQDA LP +E+ Sbjct: 77 TKRRFVEVSAVSAGVKEVRAAIEQARRELGMSGRQTVLFVDEVHRFNKAQQDALLPAVEN 136 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 +TFIGATTENP F + S LLSR+ + L+SLS +DI VL +A+ D RG G+ + Sbjct: 137 RWVTFIGATTENPFFSVISPLLSRSLLLTLESLSEDDIRMVLERAVAD-PRGLDGKAKLA 195 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 P E + L GDARR+L LE + +A+ + + E++ + + R+D +G Sbjct: 196 P-EAAEHLVRLAGGDARRSLTYLEAASLIADGE------ITVEVVERAVDKAAVRYDRQG 248 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D+ YD+IS KS+RGS DAAL++ AR++ AG DP ++ARR + ASEDVG ADP +Q Sbjct: 249 DQHYDVISGFIKSMRGSDADAALHYLARMVEAGEDPRFIARRIVIFASEDVGMADPTCLQ 308 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 VA+AA +G EG +AQA+++ A APKSNAV A AA D R VP HL Sbjct: 309 VAVAAAQAVEFIGLPEGRLNLAQAVIHCALAPKSNAVINAIGAASEDVRRGSIGHVPAHL 368 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 R+A K++G+G+ Y+Y HD + + Y P E+ RYY PT G E ++ Sbjct: 369 RDAHYGGAKKLGHGKGYKYPHDFEHGLVRQD-YAPEELRDRRYYQPTRHGAEAAFADR 425 >UniRef50_A1SJC4 Recombination protein MgsA n=2 Tax=Actinobacteria (class) RepID=A1SJC4_NOCSJ Length = 456 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 195/428 (45%), Positives = 262/428 (61%), Gaps = 8/428 (1%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 SL + + PLA RMRP L + +GQ L AAG PL R +E S++LWGPPGTGKT Sbjct: 19 SLSANTHASAPLAVRMRPRTLDELVGQAQLRAAGSPLRRLVEGDQSMSLLLWGPPGTGKT 78 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQ 123 T+A ++++ + +SAV++GVKE+R AI+ AR GR T+LFVDEVHRF+K+QQ Sbjct: 79 TIAAIVSQQTDRRFVEVSAVSAGVKEVRAAIDAARAELAGGGRETVLFVDEVHRFSKAQQ 138 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 DA LP +E+ +T I ATTENP F + S LLSR+ + L+SL +D+ VL +A+ D+ R Sbjct: 139 DALLPGVENRWVTLIAATTENPFFSVISPLLSRSLLLRLESLDDDDVRAVLDRAITDE-R 197 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 G G + + D+ + L GDARR+L LE A A L E A + Sbjct: 198 GLAGS-VGVDDDALGHLVRLAGGDARRSLTYLEAAAGAALAQGLETVDLAT---AETAVD 253 Query: 244 RSA-RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 R+A R+D +GD+ YD++SA KSVRGS DAAL++ AR+I AG DP ++ARR + +ASED Sbjct: 254 RAAVRYDRQGDQHYDVVSAFIKSVRGSDADAALHYLARMIEAGEDPRFIARRLMILASED 313 Query: 303 VGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE 362 VG ADP A+ A+AA +G E + +A A + LA APKSNAV TA AALAD R Sbjct: 314 VGLADPTALPTAVAAAQTVQLIGMPEAQLTLAHATIALAVAPKSNAVTTAIGAALADVRA 373 Query: 363 RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 VP HLR+A K++G+G Y+Y+HDE A + Y P +A YY PT G Sbjct: 374 GKIGQVPPHLRDAHYSGAKKLGHGARYKYSHDEPFGIAEQQ-YAPDVVADAEYYRPTTLG 432 Query: 423 LEGKIGEK 430 E I E+ Sbjct: 433 AEAAIKER 440 >UniRef50_C5MFE6 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MFE6_CANTT Length = 698 Score = 311 bits (798), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 169/414 (40%), Positives = 247/414 (59%), Gaps = 22/414 (5%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L + GQ+ LL L I++ + S +LWG PG GKT+LA +IA+ + Sbjct: 161 PLAHRLRPKTLDDFFGQEKLLGKDGALRNMIQSDIIPSFLLWGVPGIGKTSLARIIAKNS 220 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +S + S K ++E +A ++ G+RTILF+DE+HRFNK+ QD LP IE G Sbjct: 221 RCKFVELSGIDSNAKNLKEVFLQAENHKKLTGQRTILFLDEIHRFNKAVQDLLLPVIEKG 280 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED----KTRGYGGQD 189 +T IGATTENPSF LN+ALLSR ++++ L+TE + ++LT+A+ + + + YG Sbjct: 281 IVTVIGATTENPSFNLNNALLSRVHTFVMEPLNTESLIKILTRALFEVNRIRKKLYGFHY 340 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMM-----ADMAEVDDS------GKRVLKPELLT 238 I L + IA L GD+R ALN LE + AD ++D++ G + +LL Sbjct: 341 ISLQKDAYHYIANLSMGDSRVALNILETLNAYLSADKFKIDNNDTSPKQGVIKVSADLLK 400 Query: 239 EIAGERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCL 296 + R+ +D GD YD+ISA HKS+RGS P+AA+++ ++++ G DP+++ RR + Sbjct: 401 PLLKTRNFHQMYDRNGDSHYDIISAFHKSIRGSDPNAAMFYLVKMLSGGEDPMFIMRRMI 460 Query: 297 AIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA 356 I+SED+G D + IAA + VG EGE +A LA APKS Y A ++A Sbjct: 461 VISSEDIGLRDSSCLPFMIAAKEALEFVGMPEGEIILAHCTNKLALAPKSTKSYRALRSA 520 Query: 357 LADARERPDYD---VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFP 407 +E P+ VP+HLRNAPTKLMKE+GYG EY+Y + N + YFP Sbjct: 521 QNILKENPELTKLPVPIHLRNAPTKLMKELGYGDEYKYNPNYENG-KIKQNYFP 573 >UniRef50_UPI0000D57862 PREDICTED: similar to werner helicase interacting protein n=1 Tax=Tribolium castaneum RepID=UPI0000D57862 Length = 494 Score = 310 bits (795), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 165/417 (39%), Positives = 252/417 (60%), Gaps = 31/417 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA +++P+ L ++GQ H+L L +E G + +M+LWGPPG GKT+L+ VI Sbjct: 93 PLAKQLQPKCLDDFMGQSHVLGENTVLRTLLEKGDIPNMVLWGPPGCGKTSLSGVIQGIC 152 Query: 75 NADVERI-----SAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 ++ ++ A T+GVK+++ + A+ + G RT+LF+DE+HRFNK QQD FL H Sbjct: 153 KSNPTKLKFVSLCAATAGVKDVQNIVSAAKLQQKFGCRTVLFMDEIHRFNKKQQDIFLLH 212 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA-----MEDKTRG 184 +E G I +GATTENPSF +NSALLSR RV +L+ L + + Q+L + +E +G Sbjct: 213 VEKGDIILVGATTENPSFTVNSALLSRCRVIVLQKLDPDCLYQILERGARNFNVEVVDKG 272 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 + + + + +A++ +GDAR AL L+++ + ++ +V+ E + E + Sbjct: 273 ARSKGFAVQADALKWLADISDGDARIALGNLQLVL---QYNEDKNKVVTIEDIKEKIKKS 329 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVG 304 +D KG+ Y++ISA+HKS+RGS P+AALYW R+I +G DPLY+ARR + ASED+G Sbjct: 330 HLLYDRKGEEHYNVISAMHKSIRGSDPNAALYWTTRMIVSGEDPLYIARRMVRAASEDIG 389 Query: 305 NADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA--LADARE 362 NADPRA+Q+A++ +G E + +AQ +YLA APKS +A A L + E Sbjct: 390 NADPRALQLAVSTMQGCQLLGMPECDVLLAQCAIYLARAPKSREADSALARAKQLIKSCE 449 Query: 363 RPDYDVPVHLRNAPTKLMKEMGYGQ---EYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 VP+HLRNAPT+LMK++GYG+ + RY Y PPE+ ++ Sbjct: 450 GLQPSVPMHLRNAPTRLMKDLGYGKLEGDERY-------------YMPPELKNVDFF 493 >UniRef50_C6D7W1 AAA ATPase central domain protein n=2 Tax=Bacillales RepID=C6D7W1_PAESJ Length = 436 Score = 310 bits (794), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 171/414 (41%), Positives = 252/414 (60%), Gaps = 7/414 (1%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA RMRPE L YIGQ+H++ AGK L RAIE + S++L+GPPG GKTTLA +I++ Sbjct: 17 LADRMRPETLDDYIGQEHIIGAGKLLRRAIEGDQVSSILLYGPPGCGKTTLANIISKRTA 76 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + +++AV + VK++RE I+ A+ N+ G++TILF+DEVHRFN S+QDA LP +E G Sbjct: 77 GEFVKLNAVDASVKDVREVIDTAKTNKLMYGKKTILFLDEVHRFNTSRQDALLPAVEQGI 136 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 I FIGATTENP +N ALLSR+ ++ L+ L+ + + + +A+ DK RG G + + Sbjct: 137 IIFIGATTENPFHHVNGALLSRSTLFQLEPLNEKHALEAMKRALTDKDRGLGFMTLHAEE 196 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 E + IA + GD RRALN LE+ A + G + E+ E + + R D Sbjct: 197 EALQHIAAMAGGDIRRALNALELAAVTTPSEPDGSVRITMEVAQESIRKPTVRADTSTQ- 255 Query: 255 FYDLISALHKSVRGSAPDAALYWYARII-TAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD++SA HKS+RGS+ DAAL+W+ + G DP+ RR + SED+G A+P+AM Sbjct: 256 -YDVLSAFHKSIRGSS-DAALFWFLYAVEKLGMDPMTFLRRLIVACSEDIGLANPQAMVQ 313 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+ A D + ++G E + IAQAI++ +PKSNA A A++ +VP+HLR Sbjct: 314 AVTAMDAYHKIGWPEAKYNIAQAILFAVESPKSNAAAVAIGKAMSVIEGAGQAEVPLHLR 373 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 + K +++G+ + Y+Y HD Y + Y P + Y T +G+EGKI Sbjct: 374 DTHYKGAQQLGH-EGYKYPHDYPGHY-VNQQYLPDNLKGVTIYKATEQGMEGKI 425 >UniRef50_UPI000192574D PREDICTED: similar to Werner helicase interacting protein 1 n=1 Tax=Hydra magnipapillata RepID=UPI000192574D Length = 527 Score = 310 bits (793), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 166/393 (42%), Positives = 236/393 (60%), Gaps = 19/393 (4%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA +MRP N + GQ A L + + S+ILWGPPG GKT+ A +I+R Sbjct: 110 PLAEQMRPNNFDNFYGQNSF-GAKNLLKELFVSNKIPSLILWGPPGCGKTSFAHIISRRC 168 Query: 75 NADVER-----ISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLP 128 + +SA +G+ ++++ I+ A+ + R+T+LF+DE+HRFNK QQD FLP Sbjct: 169 KESDSKYRFVTLSATMAGINDVKDEIKVAKNEKKLTSRKTVLFIDEIHRFNKMQQDTFLP 228 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 ++EDGTI IGATTENPSF +N+AL+SR V + SL TE I ++L A+E Q Sbjct: 229 YVEDGTIVLIGATTENPSFYINNALISRCHVVVFNSLETEVILKILQNAIE--LLNETDQ 286 Query: 189 DIV---LPDETRRAIAELVNGDARRALNTLEMM----ADMAEVDDSGKRVLKPELLTEIA 241 ++ + +A+ NGDAR ALN L+M+ + V + ++ EL+ E Sbjct: 287 EVAKCRFEEGALNLVAQYANGDARCALNKLDMILQAKKESIHVSQANSQI-SCELIREEL 345 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 +D GD Y+LISALHKS+RGS DA++YW AR++ G PLY+ARR + IASE Sbjct: 346 QRCCVNYDKAGDEHYNLISALHKSIRGSDVDASIYWLARMLEGGEKPLYIARRLIRIASE 405 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA--LAD 359 D+G AD A+ A++A+ +G E + +AQ +VYLA APKS AVY A+K A Sbjct: 406 DIGLADSNALPQAVSAYQACHFIGMPECDIILAQVVVYLANAPKSIAVYEAYKNAKDFIK 465 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA 392 +VP+HLRNAPTKLM+ +GYG++Y+Y Sbjct: 466 NCSGSQPEVPLHLRNAPTKLMENLGYGKDYKYT 498 >UniRef50_A0Q7R7 AAA family-ATPase n=19 Tax=Francisella RepID=A0Q7R7_FRATN Length = 412 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 179/426 (42%), Positives = 248/426 (58%), Gaps = 32/426 (7%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + PLAAR+RP+++ + +GQ+HLL+ L + + + S++L G PG GKT+LA +IA Sbjct: 3 YIPLAARIRPQSIDEIVGQEHLLSQHGILTKILAGDGICSLVLCGKPGVGKTSLARIIAS 62 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +SAV SGVK+I++ I Q+ ++ +LF+DE+HRFNKSQQD LP++E Sbjct: 63 SKKLEFFELSAVDSGVKDIKKLITD-NQHLDS---FVLFLDEIHRFNKSQQDILLPYVES 118 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G I IGATTENP++ LN AL+SR + LK LS V TQ + +KT QD VL Sbjct: 119 GKIILIGATTENPTYYLNDALVSRLFILRLKRLSL-----VATQKLIEKTLS---QDEVL 170 Query: 193 PDETRRAIAELVN-------GDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERS 245 + L N GD R+ LN LE M ++ D + L EL + GE S Sbjct: 171 AKHKFKIDDGLYNSMHNYSEGDCRKILNLLERMFLISTRGD--EIYLNKELFDQAVGETS 228 Query: 246 ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 F +G FY+ +SA HKSVRG+ PDAA++W + ++ G DPL +ARR L IASED+GN Sbjct: 229 RDFHREGKEFYEQLSAFHKSVRGTDPDAAIFWLSVMLDNGVDPLVIARRMLCIASEDIGN 288 Query: 306 ADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD 365 ADP+A++VA+ AW+ + ++G EG +AQA +YLA APKSNA Y A A + + Sbjct: 289 ADPQALRVAMDAWNAYEKLGMPEGRLVLAQAAIYLAVAPKSNACYKALAQAQQLVKSLGN 348 Query: 366 YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 DVP HL+N Y Y H+ N+Y + Y P I Q +Y PT G E Sbjct: 349 IDVPQHLKNYK---------DSNYLYPHNYPNSYVIQQ-YLPDNIIQN-FYQPTASGFEA 397 Query: 426 KIGEKL 431 KI KL Sbjct: 398 KIKTKL 403 >UniRef50_C8WLQ0 AAA ATPase central domain protein n=3 Tax=Coriobacteriaceae RepID=C8WLQ0_EGGLE Length = 446 Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 186/416 (44%), Positives = 246/416 (59%), Gaps = 16/416 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP L + +GQ + G L AIE L S+IL+GP GTGKT+LA VIA Sbjct: 18 PLAVRMRPRTLEEVVGQDEAVGPGSWLRNAIEQDQLSSVILFGPAGTGKTSLAHVIAETT 77 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A +SA+ V ++R I+ A + +A G RTILFVDE+HRFN+SQQDA L +ED Sbjct: 78 KATFVEVSAIGGTVSDLRREIDAADKRLSAFGLRTILFVDEIHRFNRSQQDALLHAVEDR 137 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + +GATTENP FE+NSAL+SR+RV L LS E+I ++ +A+ D+ RG GG+ L Sbjct: 138 VLVLVGATTENPFFEVNSALISRSRVVELHGLSDEEIVSLVERALADE-RGLGGR-YRLD 195 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE-----IAGERSARF 248 + R AI L GD R AL TLE+ A M + S K P +TE RS + Sbjct: 196 AKARDAIVLLAGGDGRAALTTLELAAGMVQPGTSKK----PAKITEDNVRAATPHRSLPY 251 Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 D D YD+ISA KS+RGS PDAALYW AR+I G DP ++ARR ASED+GNADP Sbjct: 252 DKNKDMHYDVISAFIKSMRGSDPDAALYWLARMIDGGEDPKFIARRMFIAASEDIGNADP 311 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDV 368 +A+ +A AA+ +G E +AQA +YLA APKSNA AAL + R P +V Sbjct: 312 QALLIAEAAFKSAEVIGYPECRINLAQAAIYLALAPKSNAAEAGIDAALNEVRNGPSRNV 371 Query: 369 PVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLE 424 P HLR+ + G EY+Y H + + + + Y P + + +Y ++RG E Sbjct: 372 PDHLRDRHRPGSENYG---EYKYPHSYPSGWVS-QRYLPDGLERGCFYRSSDRGWE 423 >UniRef50_O13984 ATPase WRNIP1 homolog C26H5.02c n=1 Tax=Schizosaccharomyces pombe RepID=WRIP1_SCHPO Length = 504 Score = 308 bits (788), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 171/407 (42%), Positives = 242/407 (59%), Gaps = 10/407 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R RP++L +Y+GQ+ L+ + IE +SMILWG GTGKTTLA +IA Sbjct: 84 RPLAERARPKSLDEYVGQEELVGERGIIRNLIEQDRCNSMILWGSAGTGKTTLARLIAVT 143 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + ISA ++ V + R+ E ++ GR+TI+F+DEVHRFN++QQD FLP +E Sbjct: 144 TKSRFIEISATSTTVADCRKIFEDSQNYLTLTGRKTIIFLDEVHRFNRAQQDIFLPMVEK 203 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G +T IGATTENPSF LNSAL+SR V++LK L+ ++++++L A ++ G + Sbjct: 204 GLVTLIGATTENPSFRLNSALISRCPVFVLKKLTRDNVKKILNHACLLESERLGSSMPNV 263 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 I+ + +GDAR ALN LEM M +K +L+ SA +D G Sbjct: 264 ETSIIDYISAITDGDARMALNALEMSIGMLRQGPLSLEDIKDKLV-----RSSALYDRVG 318 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD ISA HKSVRGS DA LY+ R++ +G DPLYVARR + IASED+G AD + Sbjct: 319 DVHYDTISAFHKSVRGSDVDATLYYLGRMLESGEDPLYVARRMVRIASEDIGIADNSMLP 378 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD---YDVP 369 +A + + +VG E + +A V LA APKS VY ++ A + PD ++P Sbjct: 379 LASSTFTAVQQVGMPEADVILAHCAVALALAPKSVDVYRSYNAVKSFLSSHPDAGRAEIP 438 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 +H+RNAPT LMK++GY + Y+Y D + E Y P I T++Y Sbjct: 439 MHIRNAPTNLMKQLGYHKGYKYNPDYKDGLVMQE-YLPDSIKGTKFY 484 >UniRef50_A4E6Q7 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E6Q7_9ACTN Length = 454 Score = 307 bits (787), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 193/458 (42%), Positives = 264/458 (57%), Gaps = 32/458 (6%) Query: 1 MSNLSLD--FSDNTFQ------PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS 52 M +++D FS +T + PLA RMRP +L +Y+GQQ + G L AIE L S Sbjct: 1 MHGMAMDDLFSASTRERSFKNAPLAVRMRPNSLDEYVGQQKAVGKGSWLRAAIEHDVLSS 60 Query: 53 MILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILF 111 +IL+GP GTGKTTLA +IA + ++ +SAVT VK++R I+ A+ N RRTILF Sbjct: 61 VILYGPAGTGKTTLAHIIANHTKSEFVEVSAVTGTVKDLRRVIDEAKTRLNTYDRRTILF 120 Query: 112 VDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIE 171 +DE+HRF+KSQQDA L +E+ T+ IGATTENP FE+NSALLSR RV L+ L EDI Sbjct: 121 IDEIHRFSKSQQDALLHAVENRTVIMIGATTENPYFEVNSALLSRGRVVELEHLKDEDIA 180 Query: 172 QVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA--------- 222 ++ +A+E +G G+ ++T + I L GDAR AL TLE+ +++A Sbjct: 181 TLIERALE-APQGLNGK-FSADEDTAKTICTLAAGDARSALTTLELASEIAVTRPDTEGT 238 Query: 223 EVDDSGKRVLKPELLTEIAGERSA-RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 +G+R +IA R +D GD YD+ISA KS+RGS PDA +YW AR+ Sbjct: 239 PAPAAGERYPITVDDVKIANPRRGFTYDKNGDMHYDIISAFIKSMRGSDPDATVYWLARM 298 Query: 282 ITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLA 341 I AG DP ++ARR + ASEDVGNADP+A+ VA AA+ +G E +AQA +Y+ Sbjct: 299 IDAGEDPKFIARRIMIHASEDVGNADPQALLVAHAAFKSAEVIGYPECRINLAQAALYVC 358 Query: 342 CAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAA 401 APKSNA + AALAD +VP +LR+ E G Y+Y HD + Sbjct: 359 LAPKSNACEASIDAALADIHSSGLREVPSYLRDRHRPGSDEYGV---YKYPHDYPEGW-V 414 Query: 402 GEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQ 439 + Y P + + ++ P RG E W EQ + Sbjct: 415 DQRYLPEGLERGAFWQPAGRGWE-------EWRVEQSE 445 >UniRef50_Q50739 Uncharacterized AAA domain-containing protein Rv2559c/MT2636 n=53 Tax=Bacteria RepID=Y2559_MYCTU Length = 452 Score = 306 bits (784), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 182/428 (42%), Positives = 263/428 (61%), Gaps = 6/428 (1%) Query: 7 DFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTL 66 D + PLA RMRP +L + +GQ HLLA G PL R +E + S+IL+GPPG+GKTTL Sbjct: 22 DLGASAGAPLAVRMRPASLDEVVGQDHLLAPGSPLRRLVEGSGVASVILYGPPGSGKTTL 81 Query: 67 AEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAF 126 A +I++ E +SA+++GVKE+R IE +R+ G +T+LF+DEVHRF+K+QQDA Sbjct: 82 AALISQATGRRFEALSALSAGVKEVRAVIENSRKALLHGEQTVLFIDEVHRFSKTQQDAL 141 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 L +E + + ATTENPSF + + LLSR+ + L+ L+ ED V+ +A++D RG G Sbjct: 142 LSAVEHRVVLLVAATTENPSFSVVAPLLSRSLILQLRPLTAEDTRAVVQRAIDDP-RGLG 200 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSA 246 V P E + +L GDARRAL LE+ A+ A+ + ++ + + + + Sbjct: 201 RAVAVAP-EAVDLLVQLAAGDARRALTALEVAAEAAQ---AAGELVSVQTIERSVDKAAV 256 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 R+D GD+ YD++SA KSVRGS DAAL++ AR++ AG DP ++ARR + +ASED+G A Sbjct: 257 RYDRDGDQHYDVVSAFIKSVRGSDVDAALHYLARMLVAGEDPRFIARRLMILASEDIGMA 316 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 P A+QVA+AA +G E + +A A ++LA APKSNAV TA AA+ D + Sbjct: 317 GPSALQVAVAAAQTVALIGMPEAQLTLAHATIHLATAPKSNAVTTALAAAMNDIKAGKAG 376 Query: 367 DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGK 426 VP HLR+ +G Q Y+Y+HD+ + A + Y P E+ YY PT RG E + Sbjct: 377 LVPAHLRDGHYSGAAALGNAQGYKYSHDDPDGVVAQQ-YPPDELVDVDYYRPTGRGGERE 435 Query: 427 IGEKLAWL 434 I +L L Sbjct: 436 IAGRLDRL 443 >UniRef50_C6IZU9 AAA ATPase central domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZU9_9BACL Length = 452 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 185/437 (42%), Positives = 263/437 (60%), Gaps = 19/437 (4%) Query: 2 SNLSLD-FSDNTFQP-----LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMIL 55 S+L +D FS N Q LA RMRP +L +YIGQ+H++ GK L RAIEA + S++L Sbjct: 12 SDLKVDLFSFNQEQSPAGRLLADRMRPTSLDEYIGQEHIVGPGKLLRRAIEADQVSSILL 71 Query: 56 WGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA--GRRTILFVD 113 +GPPG GKTTLA +I+ + A+ R++AV + VK++RE IE+A QN A G +TILF+D Sbjct: 72 YGPPGCGKTTLAHIISHHTKAEFVRLNAVDASVKDVREVIEKA-QNDKAFYGTKTILFLD 130 Query: 114 EVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQV 173 EVHRFN S+QDA LP +E GTI FIGATTENP +N AL+SR+ ++ L+ L+ E Sbjct: 131 EVHRFNSSRQDALLPAVEKGTIIFIGATTENPFHYVNGALMSRSTLFQLEPLTKEHSLIA 190 Query: 174 LTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLK 233 + +A+ D+ +G G + + +E IA + NGD RRALN LE+ A G Sbjct: 191 MRRALADQEKGLGFMPLQVDEEALLHIAAMANGDIRRALNALELAAMTTPPQPDG----T 246 Query: 234 PELLTEIAGERSARFDNKGDRF--YDLISALHKSVRGSAPDAALYWYARIITA-GGDPLY 290 + E+A E R K D YD++SA HKS+RGS+ DAA++W+ + G DP+ Sbjct: 247 VHITLEVAEESIRRPLVKADESTQYDVLSAFHKSIRGSS-DAAVFWFLYAVEKLGMDPMT 305 Query: 291 VARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY 350 RR +A +SED+G A+P+AM A++A + + G E I QAI++ +PKSNAV Sbjct: 306 FIRRLIAASSEDIGLANPQAMVQAVSALEAYRNNGWPEARLNIVQAILFAVESPKSNAVV 365 Query: 351 TAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI 410 A A+A E +VP+HLR+ K ++G+ + Y+Y HD Y E Y P + Sbjct: 366 EAIGNAMAAIEEVKSAEVPLHLRDTHYKGAAKLGH-EGYKYPHDYPGHYVQQE-YLPKRL 423 Query: 411 AQTRYYFPTNRGLEGKI 427 + +Y T +G E KI Sbjct: 424 SGRTFYHATEQGNEAKI 440 >UniRef50_Q47N55 Recombination protein MgsA n=6 Tax=Bacteria RepID=Q47N55_THEFY Length = 441 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 192/422 (45%), Positives = 261/422 (61%), Gaps = 10/422 (2%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 + +PLA RMRP L + +GQ+HLL G PL R +E +++LWGPPGTGKTTLA V++ Sbjct: 16 SHEPLAVRMRPRTLDEVVGQRHLLGEGSPLRRLVEDDAPMALLLWGPPGTGKTTLATVVS 75 Query: 72 RYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHI 130 R +SAVTSGVK+IR+ ++ AR+ G T+LFVDEVHRF+K+QQDA LP + Sbjct: 76 RATRRRFVELSAVTSGVKDIRDVVDEARRELGMRGVHTLLFVDEVHRFSKTQQDALLPAV 135 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E+ ++FIGATTENP F + S LLSR+ + L + S +DI V+ +A+ D+ RG G+ Sbjct: 136 ENRWVSFIGATTENPFFSVISPLLSRSLLLTLHAHSDDDIRTVVRRALTDE-RGLAGR-Y 193 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSA-RFD 249 L +E + L GDARR+L LE A +A G R E A +R+A R+D Sbjct: 194 TLTEEALHHLVRLAGGDARRSLTYLEAAALVA-----GDRTEITVADVERAADRTAVRYD 248 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 GD+ YD++SA KS+RGS DAAL++ AR+I AG DP ++ARR + ASEDVG ADP Sbjct: 249 RSGDQHYDVVSAFIKSMRGSDVDAALHYLARMIEAGEDPRFIARRLVVHASEDVGMADPT 308 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+Q A+AA VG E +AQA++++A APKSNAV TA A++D R VP Sbjct: 309 ALQAAVAAAQAVELVGLPEARINLAQAVIHIALAPKSNAVITAIDRAISDVRAGKLGPVP 368 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 HLR++ + ++G+G YRY HD A + Y P + YY PT G E + GE Sbjct: 369 AHLRDSHYRGAADLGHGAGYRYPHDYPGGVVA-QRYLPEGLDGAEYYRPTTHGAERRFGE 427 Query: 430 KL 431 L Sbjct: 428 VL 429 >UniRef50_P40151 DNA-dependent ATPase MGS1 n=12 Tax=Saccharomycetaceae RepID=WRIP1_YEAST Length = 587 Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 182/448 (40%), Positives = 264/448 (58%), Gaps = 37/448 (8%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGK-PLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 PL+ ++RP+ L Y+GQQH+L+ L + I+ G + SMILWGPPG GKT+LA ++ + Sbjct: 134 PLSEKLRPKELRDYVGQQHILSQDNGTLFKYIKQGTIPSMILWGPPGVGKTSLARLLTKT 193 Query: 74 ANADVER-----------ISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKS 121 A SA + +E+R E++++ RRT+LF+DE+HRFNK Sbjct: 194 ATTSSNESNVGSRYFMIETSATKANTQELRGIFEKSKKEYQLTKRRTVLFIDEIHRFNKV 253 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ--AME 179 QQD LPH+E+G I IGATTENPSF+LN+AL+SR +++L+ L+ ++ VL++ A+ Sbjct: 254 QQDLLLPHVENGDIILIGATTENPSFQLNNALISRCLIFVLEKLNVNELCIVLSRGIALL 313 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVN----GDARRALNTLEMMADMAEVDDSGKRVLKPE 235 +K R +I P + R+I E V GD RRALN LEM+ + + L + Sbjct: 314 NKCRKQVW-NIENPLKLSRSILEYVVDLSVGDTRRALNMLEMIEVSTRERKADEEELSID 372 Query: 236 LLTEIAGERSAR-----FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLY 290 + +I S+ +D KGD YD ISA HKS+RG +A+LY+ AR++ G DPLY Sbjct: 373 DVRDIIKNNSSNGLNTYYDPKGDNHYDTISAFHKSIRGGDENASLYYLARMLQGGEDPLY 432 Query: 291 VARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY 350 VARR + IASED+G D + +A+AA D +VG E + A+AQ V LA APKS +Y Sbjct: 433 VARRMIRIASEDIGLRDSSLLPLAVAAHDAVMKVGLPEADLALAQCCVALARAPKSVELY 492 Query: 351 TAFKAALADARER----PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEV-- 404 A+K A E ++P+H+RNAPTKLM+E+GY + Y+Y D Y G+V Sbjct: 493 RAWKKLRAMMSENMYSLASSEIPMHIRNAPTKLMEELGYHKGYKYNPD----YIEGKVQQ 548 Query: 405 -YFPPEIAQTRYYFPTNRGLEGK-IGEK 430 YFP E+ + + L+GK +G+K Sbjct: 549 DYFPKEVLEKCPNKTDLKFLDGKHLGDK 576 >UniRef50_UPI000192678D PREDICTED: similar to Werner helicase interacting protein n=1 Tax=Hydra magnipapillata RepID=UPI000192678D Length = 342 Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 173/370 (46%), Positives = 232/370 (62%), Gaps = 49/370 (13%) Query: 81 ISAVTSGVKEIREAIERARQNRNA--GRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFI 138 ISAV G+KEIREA+++A R+ RRTI+FVDEVHRFNKSQQ Sbjct: 12 ISAVLGGIKEIREAVDQALNARDGLEQRRTIIFVDEVHRFNKSQQ--------------- 56 Query: 139 GATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRR 198 +NSALLSRA VY+L+ L + +++++ +A + LP Sbjct: 57 ----------VNSALLSRAAVYVLQPLDADSLKKIVLKAQ---------TEYALPAIESI 97 Query: 199 AIAELV---NGDARRALNTLEMMADMAEVDDSGKRVLKPEL----LTEIAGERSARFDNK 251 AI L+ +GDARR LNTLE +A A + + PE+ L ++ GER R+D Sbjct: 98 AIDRLIAYADGDARRLLNTLETLAIAARQEQA------PEITDAWLLKVLGERMRRYDKG 151 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 G++FYD ISALHKSVRGS P+A+LYW+ R++ G DP Y+ARR + +A+ED+G ADPRA+ Sbjct: 152 GEQFYDTISALHKSVRGSDPNASLYWFTRMLDGGADPRYMARRFIRMAAEDIGLADPRAL 211 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 ++A+ A D + R+G EGE A+A+ +VYLA APKSNAVY AF A A ++ VP+H Sbjct: 212 RLALDAADVYERLGSPEGELALAECVVYLAVAPKSNAVYKAFNEAKAFVKKDGTRPVPMH 271 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 LRNAPTKLMKE+ YG+ YRYAHDE +AAGE Y P + T +Y P RGLE +I EKL Sbjct: 272 LRNAPTKLMKELDYGKGYRYAHDEEGGFAAGERYLPDGMPDTDFYRPVERGLEIRIAEKL 331 Query: 432 AWLAEQDQNS 441 L +++Q Sbjct: 332 RDLKDRNQKK 341 >UniRef50_B6HVW8 Pc22g06370 protein n=36 Tax=cellular organisms RepID=B6HVW8_PENCW Length = 539 Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 171/402 (42%), Positives = 238/402 (59%), Gaps = 18/402 (4%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP+ L + GQ+ L+ L IE + SMILWG GTGKTT+A VIA Sbjct: 123 PLAERMRPKTLEEVCGQE-LVGPNGILRGLIEQDRVPSMILWGSAGTGKTTIARVIASLV 181 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + I++ +SGV E ++ AR GR+TI+F DE+HRF+KSQQD FL +E G Sbjct: 182 GSRFVEINSTSSGVAECKKIFAEARSELGLTGRKTIIFCDEIHRFSKSQQDVFLGPVESG 241 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T IGATTENPSF++ +ALLSR R + L L+ EDI +L +A++ + Y ++V Sbjct: 242 QVTLIGATTENPSFKVQNALLSRCRTFTLAKLTDEDIISILHRALQVEGPSYSPSELV-D 300 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +E + +A +GDAR +LN LE+ D+++ K LK L + +D GD Sbjct: 301 EELIQYLARFADGDARTSLNLLELAMDLSKRAGMDKEDLKRSLTKTLV------YDRAGD 354 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD ISA HKS+RGS PDAALY+ AR+I +G DPLY++RR + +ASED+G AD + + Sbjct: 355 QHYDTISAFHKSIRGSDPDAALYYLARMIQSGEDPLYISRRLIVVASEDIGLADNTMLSL 414 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER--PDYDVPVH 371 AI+ ++G E +A A V +A + KS Y A E +P+H Sbjct: 415 AISTHSAVEKIGLPEARINLAHATVAMALSKKSTRAYRGLNNVFAALNEPGIAGLPIPIH 474 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEV---YFPPEI 410 LRNAPTKLMKE+GYG EY+Y + Y G+V Y P ++ Sbjct: 475 LRNAPTKLMKELGYGAEYKYNPN----YVDGKVQQDYLPEQL 512 >UniRef50_C8XD35 AAA ATPase central domain protein n=21 Tax=Actinobacteridae RepID=C8XD35_NAKMY Length = 494 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 191/429 (44%), Positives = 257/429 (59%), Gaps = 12/429 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAARMRP L + +GQQHLL G PL R ++ G SM+L+GPPGTGKTTLA ++A Sbjct: 42 PLAARMRPRTLDEVVGQQHLLGPGAPLRRLVQGGAPSSMLLYGPPGTGKTTLATLVAGST 101 Query: 75 NADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 ++SAV++GVKE+R I A R G +T+LF+DEVHRF+++QQD+ L +ED Sbjct: 102 GRFFAQLSAVSAGVKEVRAVIAEATTRLRRTGEQTVLFIDEVHRFSRTQQDSLLGAVEDR 161 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TI + ATTENP F + S LLSR+ + L+ L+ DI +++ +A+ D+ RG G L Sbjct: 162 TIVLVAATTENPFFSVVSPLLSRSLILQLQPLTDTDISELIDRAVADE-RGLAGA-FTLA 219 Query: 194 DETRRAIAELVNGDARRALNTLEMMAD------MAEVDDSGKRVLKPEL-LTEIAGERSA 246 + R + L GDARRAL LE A+ + DD VL+ +L E A R+A Sbjct: 220 EPARAHLVALAGGDARRALTALEASAESVRELDAPDSDDDPAGVLEIDLDAVERAVNRAA 279 Query: 247 -RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 R+D GD+ YD+ SA KS+RGS DAAL++ AR+I AG DP ++ARR + ASEDVG Sbjct: 280 VRYDRSGDQHYDVTSAFIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMVHASEDVGM 339 Query: 306 ADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD 365 ADP A+ A+AA VG E A+AQ ++L+ APKSNAV TA AA+AD RE Sbjct: 340 ADPTALPAAVAAAQVVQLVGLPEARIALAQVTIHLSTAPKSNAVITAIDAAMADVREGRA 399 Query: 366 YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 VP LR+ + +G+ Q Y Y H A A + Y P E+ YY PT G E Sbjct: 400 GSVPPALRDGHYPGAQRLGHAQRYVYPHGRPGAVVA-QQYPPDELVGRDYYRPTGFGAER 458 Query: 426 KIGEKLAWL 434 + E++ L Sbjct: 459 VLAERVPKL 467 >UniRef50_Q96S55 ATPase WRNIP1 n=37 Tax=Metazoa RepID=WRIP1_HUMAN Length = 665 Score = 302 bits (774), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 180/438 (41%), Positives = 251/438 (57%), Gaps = 37/438 (8%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA MRP+ L Y GQ + L +E + S+ILWGPPG GKTTLA +IA Sbjct: 225 KPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASN 284 Query: 74 ANADVER---ISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPH 129 + R +SA + ++R+ I++A+ ++ R+TILF+DE+HRFNKSQQD FLPH Sbjct: 285 SKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDTFLPH 344 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME-------DKT 182 +E GTIT IGATTENPSF++N+ALLSR RV +L+ L E + +L +A+ D + Sbjct: 345 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSS 404 Query: 183 R----------GYGGQDIVLPDETRRAIAELVNGDARRALNTLE-----------MMADM 221 R + + D+ +A L +GDAR LN L+ M Sbjct: 405 RPTDPLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARAGLNGLQLAVLARLSSRKMFCKK 464 Query: 222 AEVDDSGKRVLKPELLTEIAGERS-ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + S RVL E + +RS +D G+ Y+ ISALHKS+RGS +A+LYW AR Sbjct: 465 SGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDQNASLYWLAR 524 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DPLYVARR + ASED+G ADP A+ A+AA+ +G E E +AQ +VY Sbjct: 525 MLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGCHFIGMPECEVLLAQCVVYF 584 Query: 341 ACAPKSNAVYTAFKAALADARER--PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS VY+A+ A R P VP+HLRNAPT+LMK++GYG+ Y+Y + + Sbjct: 585 ARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKY--NPMYS 642 Query: 399 YAAGEVYFPPEIAQTRYY 416 + Y P E+ ++ Sbjct: 643 EPVDQEYLPEELRGVDFF 660 >UniRef50_C9M5W8 Replication-associated recombination protein A n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5W8_9BACT Length = 426 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 182/434 (41%), Positives = 253/434 (58%), Gaps = 25/434 (5%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L +Y G +LA G PL R +E G + S IL+GPPG GKT L ++ R Sbjct: 7 PLAERMRPRSLDEYRGHSSILAPGAPLRRFLEEGDVPSCILYGPPGVGKTALVRLMGRVT 66 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 ++ I+AV++ V E+R+ ++RA R +GR I FVDE++ FN+SQQDA LP +E G Sbjct: 67 GRELLEINAVSAKVSELRDLVDRAADLRRLSGRSAIAFVDELYHFNRSQQDALLPSVERG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + +G TTENP FE+N LLSR V+ + L ED+ ++L A+ D+ RG G ++ Sbjct: 127 EVILVGTTTENPRFEINKTLLSRLLVFEIGPLEKEDLVEILKSALTDRERGLGELELSAS 186 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ AIA GD R+AL LE ++ V SG+R ++ + LT+ R D + D Sbjct: 187 DDVIEAIAASAGGDGRQALTRLEFLSRAIAV--SGRRTIEEDDLTKSLPAAFVRHDRRQD 244 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y +ISA+ KS+RGS PDAA+YW AR+I G D ++ARR + +A+EDVG ADP+A+ V Sbjct: 245 DHYAVISAMIKSIRGSDPDAAVYWLARLIEGGEDVRFIARRLMILAAEDVGLADPQALVV 304 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD-YDVPVHL 372 A A D RVG E +++ +YLA APKSN+ Y A A DA R D VP HL Sbjct: 305 ATAGADAADRVGWPEARIILSEVALYLAAAPKSNSAYLAVGKA-QDAIRRGDLLAVPSHL 363 Query: 373 RNAPTKLMKEMGYGQE-YRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 N GQ Y+Y HD N + A + Y P R+Y P + G+E +I +L Sbjct: 364 IN-----------GQPGYQYPHDFPNHWTA-QAYLP---KPRRFYEPGSMGVESRIAARL 408 Query: 432 A--W--LAEQDQNS 441 A W E+D+ S Sbjct: 409 AMFWRRFQEKDEKS 422 >UniRef50_Q4P896 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4P896_USTMA Length = 566 Score = 300 bits (768), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 178/434 (41%), Positives = 254/434 (58%), Gaps = 37/434 (8%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 + +P A RMRP+ L +Y+GQ ++ PL + G + SMILWGPPGTGKTTLA ++ Sbjct: 23 DAVKPFAERMRPQTLDEYVGQSDVV--NGPLKMLLRQGKIPSMILWGPPGTGKTTLARLL 80 Query: 71 ARYANAD-------------VERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVH 116 A+ A++ VE ISA SG ++++ ++ A +RT+LF+DE+ Sbjct: 81 AKSASSTDSTCRQGPPPHRFVE-ISATNSGANDVKKILDEALHRLELTAQRTLLFIDEIQ 139 Query: 117 RFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 RFN++QQD LP +E G I + ATTENPSF L SAL+SR RV++L LS ++ QVL Sbjct: 140 RFNRAQQDVLLPAVEKGQIVLVAATTENPSFRLQSALISRMRVFVLTKLSVDECCQVLRN 199 Query: 177 AMEDKTRGYGGQD--------IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSG 228 A+ R D + + R IA + +GDAR AL LE+ ++ D S Sbjct: 200 ALASVKRESDQADQHAECVAAAYIDEHLIRWIANMADGDARTALGALELA--LSTTDAS- 256 Query: 229 KRVLKPELLTEI--AGERSA-RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAG 285 V E ++ + A +R+A ++D GD YD ISALHKS+RGS DAALYW AR++ +G Sbjct: 257 --VCSAENVSRLKTALKRTALQYDRTGDMHYDTISALHKSIRGSDADAALYWLARMVCSG 314 Query: 286 GDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPK 345 D L++ARR + ASED+ A+Q+A A + VG E +AQ +V+LA +PK Sbjct: 315 DDALFIARRLIVAASEDIDTL--AALQMATATYQACQVVGLPECGNNLAQCVVFLAESPK 372 Query: 346 SNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY 405 S Y A+ A A ++ VP+H+RNAPTKLM E+GYG+EYRY + A+ + + Sbjct: 373 STRSYRAWNKAKALVEGGYNHPVPLHIRNAPTKLMNEIGYGKEYRY--EPRFAHPVYQEF 430 Query: 406 FPPEIAQTRYYFPT 419 FPP++ TR PT Sbjct: 431 FPPQLKGTRLLSPT 444 >UniRef50_C4R299 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome n=1 Tax=Pichia pastoris GS115 RepID=C4R299_PICPG Length = 525 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 169/413 (40%), Positives = 239/413 (57%), Gaps = 28/413 (6%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L +Y+GQ HL+ P + G GKT+LA +IA Sbjct: 111 PLAERLRPKTLEEYVGQSHLVG-----PTGVLRG-----------SNGKTSLARIIAAST 154 Query: 75 NADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + +SA +SG+ E R+ E AR + R RRT+LF DE+HRFNKSQQDAFLP++E G Sbjct: 155 HNRCVELSATSSGISECRKVFEEARNEMRLTKRRTVLFCDEIHRFNKSQQDAFLPYVERG 214 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA--MEDKTRG--YGGQD 189 I IGATTENPSF+LNSALLSR RV++L L ED+ +V+ ++ + ++ R Y Sbjct: 215 DIILIGATTENPSFQLNSALLSRCRVFVLNKLDNEDLAKVVNRSLLLVNRVRKLVYNMPV 274 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD---SGKRVLKPELLTEIAGERSA 246 + L E+ + I + GD+R ALN +EM+ + +D + + P L E+ A Sbjct: 275 LRLTTESLQYIIGVAGGDSRTALNLVEMVDSHYQKNDDTTAASVEVDPSTLREVLRSTHA 334 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 +D GD+ YD ISA HKSVRGS DA LY+ AR++ G DPLY++RR + +ASED+G Sbjct: 335 VYDRVGDQHYDAISAFHKSVRGSNVDATLYYLARMLHGGEDPLYISRRMIRMASEDIGVV 394 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 D + A+A +D +VG E + +A LA A KS ++Y A+ A + ++ Sbjct: 395 DDSCLPFAVATFDAVHKVGLPEADVMLAHCAYKLATAAKSVSIYRAWNKVKAKVAQDANF 454 Query: 367 ---DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 +P+HLRNAPTKLM+E+GY + Y+Y D E Y P EI +Y Sbjct: 455 AGAPIPMHLRNAPTKLMEELGYSKGYKYNPDFKEGKVVQE-YLPSEIKDETFY 506 >UniRef50_Q8RGJ6 ATPase associated with chromosome architecture/replication n=9 Tax=Fusobacterium RepID=Q8RGJ6_FUSNN Length = 407 Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 166/425 (39%), Positives = 254/425 (59%), Gaps = 30/425 (7%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA ++RP++L ++GQ+ LL + R I L + I +GPPG GK++L E+I+ Sbjct: 12 EPLAYKLRPKSLDDFVGQEKLLGKDGVITRLILNSTLSNSIFYGPPGCGKSSLGEIISNT 71 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIED 132 + + E+++A T+ V +IR +E AR+N +RTILF+DE+HRFNK+QQDA L + ED Sbjct: 72 LDCNFEKLNATTASVSDIRNVVETARRNIELYNKRTILFLDEIHRFNKNQQDALLSYTED 131 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GT+T IGATTENP + +N+ALLSR V+ K+L+ EDI +++ +G +I + Sbjct: 132 GTLTLIGATTENPYYNINNALLSRVMVFEFKALTNEDILKLID-------KGLNFLNICM 184 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ + I ++ GD+R ALN +EM ++ ++ + E+ + I ER FD K Sbjct: 185 GDKIKEIIVDISQGDSRIALNYVEMYNNIHS------QMSEDEIFS-IFKERQVSFDKKQ 237 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D+ YD+ISA KS+RGS PDAA+YW AR++ G DP Y+ARR ASED+G A+P A+ Sbjct: 238 DK-YDMISAFIKSIRGSDPDAAVYWLARLLDGGEDPKYMARRLFIEASEDIGMANPEALL 296 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 VA AA + ++G E +A +YLA + KSN+VY A ALAD ++ +VP+++ Sbjct: 297 VANAAMNACEKIGMPEVRIILAHTTIYLAISSKSNSVYEAIDGALADIKKGELQEVPMNI 356 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +G Y+Y H+ + + + Y + +YY P N E I EKLA Sbjct: 357 ------CHDNVG----YKYPHNYTDNFIK-QKYMNK---KRKYYKPGNNKNEKLIAEKLA 402 Query: 433 WLAEQ 437 L ++ Sbjct: 403 KLWDE 407 >UniRef50_Q6BHR7 DEHA2G16302p n=8 Tax=Saccharomycetales RepID=Q6BHR7_DEBHA Length = 786 Score = 297 bits (761), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 177/443 (39%), Positives = 248/443 (55%), Gaps = 42/443 (9%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP++L +Y GQ+ L+ L I++ + S ILWG PG GKT+LA +I++ + Sbjct: 193 PLAQRLRPKSLDEYYGQEKLVGENGILKNIIKSDQIPSFILWGVPGVGKTSLARIISQTS 252 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N +S K +RE A R GR+TILF+DE+HRFNK+ QD LP IE G Sbjct: 253 NCKFLEVSGAEGNAKRLREVFTMADNERRLTGRKTILFLDEIHRFNKAVQDLLLPVIEKG 312 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM--EDKTRG--YGGQD 189 +T IGATTENPSF LN+ALLSR ++++ L EDI +++ + + +K+R +G Sbjct: 313 IVTVIGATTENPSFTLNNALLSRMHTFIMEPLLKEDIVKIINRGLLVVNKSRKLVFGLHL 372 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMM-ADMAEVD-------DSGKRV---------- 231 I L + IA L GD+R ALN LE + A ++ V + G++ Sbjct: 373 IALDKDAIDYIASLSAGDSRVALNILESINAYLSSVQYSRFSGYEEGEKAIQIPKTLGVI 432 Query: 232 ------LKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAG 285 LKP L T +D +G+ YD ISA HKSVRGS DAA+++ +++ G Sbjct: 433 KVCLQNLKPLLETR---NYQKMYDKQGESHYDTISAFHKSVRGSDADAAVFYLVKMLVGG 489 Query: 286 GDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPK 345 DPL++ARR + IASEDVG D + AIA + VG EGE +A LA APK Sbjct: 490 EDPLFIARRMIVIASEDVGLRDSSCLPFAIATKEALEFVGMPEGEIILAHCATKLARAPK 549 Query: 346 SNAVYTAFKAALADARERPDYD---VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAG 402 S Y A ++A + +E PD +P+HLRNAPTKLMKE GYG Y+Y ++ G Sbjct: 550 STKSYRALRSAQSLFKENPDTTSIPIPLHLRNAPTKLMKEFGYGDNYKYNP----SFTHG 605 Query: 403 EV---YFPPEIAQTRYYFPTNRG 422 +V Y P E+ ++ T+ G Sbjct: 606 KVKQDYMPKELRNVKFMEETHLG 628 >UniRef50_C4Y1S6 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y1S6_CLAL4 Length = 768 Score = 296 bits (759), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 174/443 (39%), Positives = 250/443 (56%), Gaps = 43/443 (9%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L + GQ+ L+ L + + + S ILWG PG GKT+LA +IA + Sbjct: 223 PLAQRLRPKTLDDFFGQEKLVGPNGILRNIMASQQIPSFILWGVPGVGKTSLARIIASNS 282 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N +S S K+++EA A+ + +G +TILF+DE+HRFNK+ QD LP IE G Sbjct: 283 NHRYVELSGSESSAKKLKEAFSNAQNEQQLSGTKTILFLDEIHRFNKAVQDLLLPVIEKG 342 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM--EDKTRG--YGGQD 189 +T IGATTENPSF LN+ALLSR ++++ LS E + ++L + + +KTR +G Sbjct: 343 VVTVIGATTENPSFTLNNALLSRMHTFVMEPLSHEALVKILNKGLLLVNKTRKIVHGLHL 402 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMA--------------DMAEVDDSGKRV---- 231 I + E IA L GD+R ALN LE + + E D +++ Sbjct: 403 IAMNKEAIDHIARLSTGDSRVALNILESVNAYLSGRKYNAFPDREEGETIDVPEKIGIIK 462 Query: 232 -----LKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 LKP L T + +D G+ YD ISA HKSVRGS DAA+++ ++++ G Sbjct: 463 VDLENLKPLLATRNFHQM---YDKVGENHYDTISAFHKSVRGSDADAAVFYLVKMLSGGE 519 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 DPL++ARR + IASED+G D + AI+A + VG EGE +A V LA APKS Sbjct: 520 DPLFIARRMIVIASEDIGLRDSSCLPFAISAMEAVQFVGMPEGEIILAHCAVKLARAPKS 579 Query: 347 NAVYTAFKAALADARERPDYD---VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAY---- 399 Y A + A +E+P+ +P+H+RNAPTKLMKE+GYG+ Y+Y N + Sbjct: 580 TKSYRALRTAQELLKEKPEVTKLPIPLHIRNAPTKLMKELGYGESYKY-----NPFFKHG 634 Query: 400 AAGEVYFPPEIAQTRYYFPTNRG 422 A + + PPEI ++ T+ G Sbjct: 635 IAKQTFMPPEIQDVKFVEDTHLG 657 >UniRef50_B2W7D9 DNA-dependent ATPase MGS1 n=2 Tax=Leotiomyceta RepID=B2W7D9_PYRTR Length = 534 Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 175/424 (41%), Positives = 248/424 (58%), Gaps = 29/424 (6%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRA-IEAGHLHSMILWGPPGTGKTTLAEVIARY 73 PLA RMRP +L GQ+ L K + RA ++ G L SM+LWG PGTGKTT+A +IA Sbjct: 118 PLAERMRPMSLEHVYGQE--LVGPKGILRAMVDEGRLPSMVLWGRPGTGKTTIARLIANT 175 Query: 74 ANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + + I++ ++ ++++R A Q+ R GR+TI+F DE+HRF+K+QQDAFL +E Sbjct: 176 SGSRFVEINSTSTRLEQVRAIFTEASQDLRLTGRKTIVFCDELHRFSKTQQDAFLGPVES 235 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GTIT I ATTENPSF++ SALLSR R + L L +D+ ++L +AM ++ +L Sbjct: 236 GTITLIAATTENPSFKIISALLSRCRTFTLDDLKEDDLVKILERAMTAES----CTSPIL 291 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 A +GDAR ALN LE+ +A D K ++ L + +D G Sbjct: 292 DKPMLAYFARFSDGDARTALNLLELAMSLANQPDMTKEKIQQSLTKTLV------YDRAG 345 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D+ YD ISALHKS+RGS P A+LY+ AR++ +G DP Y+ARR + +ASEDVG AD + Sbjct: 346 DQHYDSISALHKSIRGSDPHASLYYLARMLESGEDPRYIARRLIVVASEDVGLADNSMLS 405 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD---YDVP 369 +A A + +G E +A A+ L APKS VY K A+ DA + P +P Sbjct: 406 LATATYAACENIGMPECRINLAHAVTALTLAPKSTRVYRGLKNAI-DAVKEPGMAALPIP 464 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY--FPPEIAQTRYYFPTNRGLEGKI 427 H+RNAPTKLMK+MGYG Y+Y + Y G+V + PE + R + E + Sbjct: 465 HHIRNAPTKLMKDMGYGDGYKYNPN----YLDGKVKQEYLPEALRGRSFLE-----ETDL 515 Query: 428 GEKL 431 G+K+ Sbjct: 516 GDKI 519 >UniRef50_C6BV47 AAA ATPase central domain protein n=12 Tax=Desulfovibrionales RepID=C6BV47_DESAD Length = 420 Score = 292 bits (748), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 173/431 (40%), Positives = 246/431 (57%), Gaps = 31/431 (7%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 + L+ +DN QPLA R+RP+ + ++ GQ H+ + R+ L S++L+GPPG GK Sbjct: 1 MKLELTDN--QPLADRIRPKKIDEFFGQNHIRERVEAFERS---KRLPSLLLFGPPGCGK 55 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ 123 +TLA ++A+ RISA SG+ +R+ + AG IL +DE+HRF+K+QQ Sbjct: 56 STLAMLLAKSTGRHFMRISAPESGITALRKQL--------AGM-DILILDELHRFSKAQQ 106 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLP +E G IT + TTENPSF + LLSR V L+SL D+ + +A E+ Sbjct: 107 DFFLPILESGEITLLATTTENPSFSVTRQLLSRLHVLRLRSLGKTDLLAICNRACEE--- 163 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 +I L +++ I + GD R LN LE + + + KR + E L +I E Sbjct: 164 ----LEIELSEDSLNLITSMAGGDGRSLLNLLEYTSQLP----AEKR--EAENLRKILPE 213 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 R D GD Y+L SAL KS+RGS PDAALY+ +I +G DP ++ RR + A ED+ Sbjct: 214 TVIRGDRDGDSHYELASALIKSIRGSDPDAALYYLGCLIESGEDPKFITRRLIISAGEDI 273 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G ADP AM +A++ +G EG +++A+VYLA APKSN+ Y A+ + R+ Sbjct: 274 GLADPYAMTMAVSCQQAVEFIGMPEGFIPLSEAVVYLALAPKSNSTYAAYHTVKQEIRQN 333 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 VP+HLRNA T L KE GYG+ Y Y H N+Y E Y PPEIA +Y P ++G Sbjct: 334 GMLPVPLHLRNATTSLQKEWGYGRNYLYPHSYPNSYVEQE-YLPPEIADRMFYDPKDQGE 392 Query: 424 EGKIGEKLAWL 434 E ++ AWL Sbjct: 393 EPRLN---AWL 400 >UniRef50_C0X719 Crossover junction endodeoxyribonuclease n=29 Tax=Bacteria RepID=C0X719_ENTFA Length = 425 Score = 291 bits (744), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 163/428 (38%), Positives = 245/428 (57%), Gaps = 7/428 (1%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA RMRP +L + +GQQHL+ GK + R +EA L SMIL+GPPGTGKT++A IA Sbjct: 3 QPLAYRMRPRHLDEVVGQQHLVGPGKIIRRMVEAKMLSSMILYGPPGTGKTSIASAIAGS 62 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N ++A T K+++ E A+ + IL +DE+HR +K++QD LPH+E+G Sbjct: 63 TNYAFRMLNAATDTKKDLQIVAEEAKMSGT----VILLLDEIHRLDKTKQDFLLPHLENG 118 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATTENP +N A+ SR +++ +K L+ DI+Q + +A+ D TRG G + L Sbjct: 119 RIIMIGATTENPYITINPAIRSRTQIFEVKPLTETDIQQAIQEALTDSTRGLGDYPVHLE 178 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 ++ + + NGD R ALN LE+ ++ G+ + ++ E ++ D GD Sbjct: 179 EKALQHLTRATNGDLRSALNGLELAVKSTPKNEQGEIKITLPIIEECVQRKALTHDKDGD 238 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD+ISA KS+RGS DAAL++ R++ AG P+ + RR + IA ED+G +P A Sbjct: 239 AHYDVISAFQKSIRGSDVDAALHYLGRLVEAGDLPI-ICRRLMVIAYEDIGLGNPAAAAR 297 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 + A ++G E +A ++ L +PKSN+ TA AALAD R+ DVP HLR Sbjct: 298 TVTAVQAAEKLGFPEARIPLASVVIDLCLSPKSNSAVTAIDAALADIRQGSVGDVPDHLR 357 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG-LEGKIGEKLA 432 +A KE+ G Y+Y H+ N + + Y P ++ + RYY P + G E + ++L Sbjct: 358 DAHYAGAKELNRGIGYQYPHNFENGW-VNQQYLPDKLKEARYYEPIDIGKYEQALHQQLK 416 Query: 433 WLAEQDQN 440 + E Q Sbjct: 417 RIQEWKQK 424 >UniRef50_UPI0001C42F86 recombination factor protein RarA n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42F86 Length = 422 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 156/409 (38%), Positives = 239/409 (58%), Gaps = 6/409 (1%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP+ + IGQ HL+ GK L R ++ G L SMIL+GPPG GKT++A IA Sbjct: 4 EPLAYRMRPKKIEDIIGQSHLVGDGKLLRRMVDVGQLSSMILYGPPGVGKTSIATAIAGS 63 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + + ++AV K++ A+ A+ + + I+ +DEVHR +K++QD LPH+E G Sbjct: 64 TDTPFKLLNAVVHNKKDMEIAVAEAKMHG----QLIVILDEVHRLDKAKQDFLLPHLEKG 119 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATT NP +N A+ SR +++ L+SL+ +DI+ L +A+++ G+G + I + Sbjct: 120 LIILIGATTANPYHSINPAIRSRCQIFELESLTPDDIKTALIRAIQNPESGFGKEQIEME 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 ++ +A + GD R ALN LE+ + G + + E ++S D GD Sbjct: 180 EDAISHLAHMCGGDVRSALNALELAVKSTFATEDGIKHISLETAESCIQKKSFHHDKDGD 239 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD++SA KS+RGS +A L++ AR++ A GD +ARR L I+ ED+G A+P+A Sbjct: 240 AHYDVLSAFQKSIRGSDVNAGLHYLARLLEA-GDLTSIARRLLVISYEDIGLANPQAGVR 298 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +AA + R+G E ++ A+V L +PKSN+ Y A AA+AD R DVP HL+ Sbjct: 299 TLAAIESAERLGMPEARIPLSNAVVELCLSPKSNSAYKAIDAAIADIRGGASGDVPKHLK 358 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 +A K K +G G EY+Y HD + + + Y P ++ + RYY P G Sbjct: 359 DAHYKGAKALGRGVEYQYPHDFDHGWVKQQ-YLPDKLKKARYYEPKRTG 406 >UniRef50_UPI00015B415D PREDICTED: similar to werner helicase interacting protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B415D Length = 522 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 163/407 (40%), Positives = 234/407 (57%), Gaps = 59/407 (14%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA--- 71 PLA +MRP ++ Y+GQ+H+L L + + + ++ILWGPPG GKT+LA VIA Sbjct: 110 PLAEKMRPNSIMSYVGQKHVLGPETMLYQLLSKTEIPNIILWGPPGCGKTSLANVIANTC 169 Query: 72 --------RYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ 123 RY ++SA SG+ ++++AI A GRRT++F+DE+HRFNK+QQ Sbjct: 170 QHCPGGKYRYV-----KLSAAMSGISDVKDAITIASNELKFGRRTVMFMDEIHRFNKTQQ 224 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLPHIE GTI IGATTENPSF LN+ALLSR RV +L+ L+ E++ ++L +A+ K Sbjct: 225 DTFLPHIESGTIILIGATTENPSFSLNAALLSRCRVIVLEKLTIENLTEILIRAI--KAA 282 Query: 184 GYGGQDIVLPD------------ETRRAIAELVNGDARRALNTLEM-------------- 217 G D P ET + +AE +GDAR AL LE+ Sbjct: 283 GGAVHDFEKPPNASINNKFFIDRETVKWLAETSDGDARIALGGLELAIHSKVPSSEGSSS 342 Query: 218 -MADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY 276 + +DD + K +L +D KGD+ YD+ISALHKSVR S +AALY Sbjct: 343 SGLNFISLDDVKDSLKKTHML----------YDKKGDQHYDMISALHKSVRASDDNAALY 392 Query: 277 WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQA 336 W R++ G DP+Y+ RR + +A+ED+G DP+A+ VA+ +G E + +AQ Sbjct: 393 WITRMMAGGEDPVYIGRRLVRMATEDIGLEDPKALGVAVHTMQSCKMLGMPECDVLLAQC 452 Query: 337 IVYLACAPKSNAVYTAFKAA---LADARERPDYDVPVHLRNAPTKLM 380 +YLA APKS + + +AA +A+ ++ VP+HLRN PT ++ Sbjct: 453 AIYLARAPKSRLMEDSLRAAQRVVANYKD-AQLPVPLHLRNIPTSIL 498 >UniRef50_Q9WYX8 UPF0189 protein TM_0508 n=15 Tax=cellular organisms RepID=Y508_THEMA Length = 599 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 160/421 (38%), Positives = 237/421 (56%), Gaps = 21/421 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PL+ +RP++ ++GQ H+ L R ++ G++ S IL+GPPG+GKT++ ++ RY Sbjct: 6 KPLSELLRPKDFEDFVGQDHIFGNKGILRRTLKTGNMFSSILYGPPGSGKTSVFSLLKRY 65 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N +V +S+ GV EI+ ++R Q R G++ +LF+DE+HR NK+QQ + H+E G Sbjct: 66 FNGEVVYLSSTVHGVSEIKNVLKRGEQLRKYGKKLLLFLDEIHRLNKNQQMVLVSHVERG 125 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I + TTENPSF + ALLSR R+ K LS ED+ ++L +A E +I L Sbjct: 126 DIVLVATTTENPSFVIVPALLSRCRILYFKKLSDEDLMKILKKATEV-------LNIDLE 178 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + +AI GDAR+ LNTLE++ + KRV +L T + G S + Sbjct: 179 ESVEKAIVRHSEGDARKLLNTLEIVHQAFK----NKRVTLEDLET-LLGNVSGY---TKE 230 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD SA KS+RGS P+AA+Y+ ++I G DP ++ARR + ASEDVG ADP A+ + Sbjct: 231 SHYDFASAFIKSMRGSDPNAAVYYLVKMIEMGEDPRFIARRMIIFASEDVGLADPNALHI 290 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A++ VG E + + VYL+ APKSN+VY A K +E P DVP+ LR Sbjct: 291 AVSTSIAVEHVGLPECLMNLVECAVYLSLAPKSNSVYLAMK----KVQELPVEDVPLFLR 346 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 N T+ MK+ GYG+ Y Y HD Y P ++ + P G E ++ E+L Sbjct: 347 NPVTEEMKKRGYGEGYLYPHDFGGFVKTN--YLPEKLKNEVIFQPKRVGFEEELFERLRK 404 Query: 434 L 434 L Sbjct: 405 L 405 >UniRef50_C7LWR1 AAA ATPase central domain protein n=3 Tax=Desulfovibrionales RepID=C7LWR1_DESBD Length = 430 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 162/414 (39%), Positives = 239/414 (57%), Gaps = 26/414 (6%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +RPE+L +IGQ H + L +++ L S++L+GPPG GK+T+A ++A++ Sbjct: 19 RPLAESLRPESLDDFIGQSHFRQRLRTL---MQSKDLPSLLLFGPPGCGKSTVALLLAKH 75 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A+ R+SA G+ +R+ I+ + IL +DE+HR++K+QQD FLP +E G Sbjct: 76 ADKPFVRVSAPEVGITALRKQIQD---------KEILILDELHRYSKAQQDFFLPLLETG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T I TTENPSF + LLSR V L+SL ++ V + ME D ++P Sbjct: 127 ELTLIATTTENPSFSVTRQLLSRLHVLRLRSLGMAELVDVGKRGMEK-------LDSLIP 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +++ +A L GDAR LN +E A + E D L+P+ L E R D +GD Sbjct: 180 EKSLELLATLSGGDARTMLNLVEFAAGLEEKD------LEPDQLKTRLPEIVLRGDREGD 233 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y+L SAL KS+RGS PDAALY+ A ++ G DP ++ RR + A+EDVG DP A+ + Sbjct: 234 SHYELASALIKSIRGSDPDAALYYLASLVETGEDPRFICRRLILSAAEDVGLGDPMALPL 293 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A++ R+G EG +A+ VYLA APKSN+ Y + +A+ + R VP+HLR Sbjct: 294 AVSCEQAVERIGMPEGWIPMAETTVYLALAPKSNSAYAGYLSAIKEIRTNGPKPVPLHLR 353 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 NA T L KE GYGQ Y+Y H A+ + Y PPE+ +Y +G E ++ Sbjct: 354 NASTSLQKEWGYGQGYKYPHAYPEAWVEQD-YLPPELKGRVFYQAKTQGHEERL 406 >UniRef50_C5RHF7 AAA ATPase central domain protein n=11 Tax=Bacteria RepID=C5RHF7_CLOCL Length = 424 Score = 284 bits (727), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 155/424 (36%), Positives = 241/424 (56%), Gaps = 8/424 (1%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA R+RP+ + + +GQ HL+ K L + IE+ H+ +MI +GPPG GKTT+A +IA+ Sbjct: 1 MKPLADRLRPQVIEEVVGQSHLIGQNKILTKIIESQHIPNMIFYGPPGCGKTTVANIIAK 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 N +++A + K+I+E I A + +L++DE+ FNK QQ + L IE+ Sbjct: 61 ATNKRFFKLNATNASTKDIKEIILELDTFMGA-KGVLLYLDEIQNFNKKQQQSLLEFIEN 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G+IT I +TTENP F + +A+LSR+ V+ K +S++DIE+ L +A+E + I+L Sbjct: 120 GSITLIASTTENPYFYVYNAILSRSNVFEFKMVSSDDIEKALMRAVEVLQNDFKSSKILL 179 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPEL--LTEIAGERSARFDN 250 DE + I+ + GD R+ALN LE+ ++ D+ ++K ++ + + FD Sbjct: 180 EDEALKYISAIAGGDVRKALNALELAVFSSKAKDN---IIKIDINAAYDATQRKIMNFDK 236 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 GD YD++SA KS+RGS DAA+++ AR+I GGD L + RR + IA ED+G A P A Sbjct: 237 DGDGHYDVLSAFQKSIRGSDADAAVHYLARLIR-GGDLLSICRRLMVIACEDIGLAFPSA 295 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + + + D ++G E +A+A + LA +PKSN+ A +ALAD + D+P Sbjct: 296 ISIVKSCVDSALQLGFPEARIPLAEATILLATSPKSNSAIVAIDSALADIDNKDIGDIPY 355 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HL+++ K +G+G Y Y H N Y + Y P I YY N E I Sbjct: 356 HLKDSHYKGADTLGHGVGYLYPHSFENNYVKQQ-YLPDNIKNAIYYKAGNNKFENNIKMY 414 Query: 431 LAWL 434 L L Sbjct: 415 LNKL 418 >UniRef50_B6K1T7 DNA-dependent ATPase MGS1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K1T7_SCHJY Length = 514 Score = 283 bits (725), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 172/411 (41%), Positives = 240/411 (58%), Gaps = 25/411 (6%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R+RP+ L Y+GQ+ L+ G + IE SMILWG G GKTTLA +IA+ Sbjct: 87 RPLAERVRPKTLDDYVGQESLVGKGGIIRNLIERDECPSMILWGNSGVGKTTLARIIAKT 146 Query: 74 ANADVERISAVTSGVKEIREAIERARQN--RNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 A +SA ++ V + R+ E + QN R G++TI+F+DEVHRFN++QQD FLP +E Sbjct: 147 TGAHFLEVSATSASVSDCRKIFEES-QNLLRLTGKKTIVFLDEVHRFNRAQQDIFLPMVE 205 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 G IT NPSF LNSALLSR V+ L +++ +L +AM+ ++ + + Sbjct: 206 KGLITL------NPSFRLNSALLSRCSVFTFNVLDKDNVLSILRRAMQIESE-RKERKLE 258 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 L + + I+ + +GDAR ALN LE+ M E G V P+L + A S +D+ Sbjct: 259 LDESILQHISAICDGDARVALNCLEIALGMLE----GGSVSLPDLKKKFARSFSV-YDST 313 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 GD YD ISA HKS+RGS DAALY+ R++ +G DPLYVARR + IASEDVG D + Sbjct: 314 GDAHYDTISAFHKSIRGSDVDAALYYLCRMLESGEDPLYVARRMVRIASEDVGLGDNSLL 373 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD---YDV 368 +A AA+ ++G E + +A LA APK+ VY A+K + P+ + Sbjct: 374 PLASAAFTATQQIGMPEADVVLAHCAAALALAPKNVDVYRAYKRVKSFVASDPEAGRAQI 433 Query: 369 PVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEV---YFPPEIAQTRYY 416 P+HLRNAPTKLMKE+GY + Y+Y D Y G V Y P + R++ Sbjct: 434 PMHLRNAPTKLMKELGYNKGYKYNPD----YKDGRVKQDYLPKPMKDKRFF 480 >UniRef50_D1B930 AAA ATPase central domain protein n=2 Tax=Synergistaceae RepID=D1B930_THEAS Length = 421 Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 177/418 (42%), Positives = 240/418 (57%), Gaps = 17/418 (4%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 + PL RMRP +L +Y+GQ+HLL G PL I + L S IL+GPPG GKTTL ++ Sbjct: 6 SLMTPLPERMRPRSLDEYVGQEHLLGEGGPLRLLISSNSLRSCILYGPPGVGKTTLVRLM 65 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQDAFLPH 129 A ++ I+AVTS + ++R +RA + G I FVDE++ FN QQ+ LP Sbjct: 66 ATTTGRELLEINAVTSKLSDLRALADRAASLTSMGFEPPIAFVDEIYHFNSQQQNVLLPF 125 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E G + +G TTENP FE+N LLSR VY LK L + QVL +A+ED RG G Sbjct: 126 VESGQMVLVGTTTENPWFEVNKTLLSRMLVYELKPLEDRHVIQVLVRALEDFDRGLGRLG 185 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 + + D+ A+A GD R+AL LE +A + V SG RV+ E + AG R+D Sbjct: 186 LSVTDDALAALAASSQGDLRQALVRLETVA--SAVAASGGRVMGEEQVAAFAGRAFKRYD 243 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 K D+ Y +ISA KSVRGS PDAA+YW AR++ +G DP ++ARR +A+E+VG ADP Sbjct: 244 RKADQHYGVISAFIKSVRGSDPDAAVYWLARMLESGEDPRFIARRICILAAEEVGLADPM 303 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ VA AA F RVG EG+ +A+A +Y+A APKSN VY A + A + +VP Sbjct: 304 ALVVAQAAASAFDRVGLPEGDMILAEAALYIAAAPKSNRVYRAIRDAREAVAKGDVLEVP 363 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 HL + YRY HD + + Y P R+Y P++RG E KI Sbjct: 364 EHL----------LPGSPNYRYPHDSPSGWVPSS-YLP---EPRRFYRPSDRGGELKI 407 >UniRef50_C7NB61 AAA ATPase central domain protein n=12 Tax=Fusobacteriaceae RepID=C7NB61_LEPBD Length = 409 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 150/389 (38%), Positives = 232/389 (59%), Gaps = 28/389 (7%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R RP++L + GQ+ L+ L + IE G+ + I WG PGTGKTTLAE+I+ Sbjct: 12 KPLAFRYRPKSLDDFYGQKRLVGENGILRKIIERGNFMNAIFWGAPGTGKTTLAEIISNK 71 Query: 74 ANADVERISAVTSGVKEIREAIERA--RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 N E ++A+ + V +I+E E+A R + N G++T+LF+DE+HRFNK QQD+ L +E Sbjct: 72 MNYHYEYLNAIKASVADIKEISEKAANRFHMN-GQQTLLFLDEIHRFNKLQQDSLLQDLE 130 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 +G I IGATTENP + LN+ALLSR + K LS +++ ++L E + G Sbjct: 131 NGNIILIGATTENPYYNLNNALLSRCLAFEFKKLSEKNLMEILKNINEKENFG------- 183 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + D+ I+E++ GDAR+A+N LE++ ++ V+ + + V EI + + +K Sbjct: 184 ISDDILEYISEIIEGDARQAINILELITNVG-VEFTLEEV------KEILNTKKSY--HK 234 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 + Y+ ISA+ KS+RGS PDA +YW A++++ G D LY+ARR + +ASED+G A+P+A+ Sbjct: 235 TEDKYNTISAMIKSIRGSDPDATVYWMAKMLSGGEDILYIARRLVILASEDIGLANPQAL 294 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A+A + +G E +++ +YLA +PKSN+ Y A +AL +VPVH Sbjct: 295 PIAVAGLNAIKEIGMPEARIILSEVAIYLAISPKSNSAYNAINSALKHIENEKIQEVPVH 354 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYA 400 L K Y+Y HD N Y Sbjct: 355 LTKVGVK---------AYKYPHDYENHYV 374 >UniRef50_O34528 Uncharacterized AAA domain-containing protein yrvN n=349 Tax=cellular organisms RepID=YRVN_BACSU Length = 421 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 159/410 (38%), Positives = 232/410 (56%), Gaps = 6/410 (1%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA RMRP + IGQQHL+A K + R ++A HL SMIL+GPPG GKT++A IA Sbjct: 1 MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAG 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +++AV + K++ + A+ + + IL +DEVHR +K +QD LP++E+ Sbjct: 61 STSIAFRKLNAVINNKKDMEIVAQEAKMSG----QVILILDEVHRLDKGKQDFLLPYLEN 116 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G I IGATT NP +N A+ SR +++ L+ L+ E I+Q L +A+ D+ RG G + + Sbjct: 117 GMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALERALHDEHRGLGTYSVSI 176 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ A GD R ALN LE+ + G+ + E E ++S D G Sbjct: 177 DDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDG 236 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD++SA KS+RGS +AAL++ AR+I A GD +ARR L IA ED+G A P+A Sbjct: 237 DAHYDVLSAFQKSIRGSDANAALHYLARLIEA-GDLESIARRLLVIAYEDIGLASPQAGP 295 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + A RVG E +A A++ L +PKSN+ A ALAD R DVP HL Sbjct: 296 RVLNAIQTAERVGFPEARIPLANAVIELCLSPKSNSAILAIDEALADIRAGKIGDVPKHL 355 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 ++A K +E+G G +Y+Y H+ N + + Y P + +YY P G Sbjct: 356 KDAHYKGAQELGRGIDYKYPHNYDNGWVEQQ-YLPDPLKNKQYYKPKQTG 404 >UniRef50_A5DW03 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DW03_LODEL Length = 839 Score = 277 bits (708), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 174/470 (37%), Positives = 246/470 (52%), Gaps = 68/470 (14%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L +IGQ+ L+ PL I+A + S +LWGPPG GKTT+A +IA+ Sbjct: 182 PLAHRVRPKTLDDFIGQEKLVGENAPLRNLIQADLIPSFLLWGPPGCGKTTIARIIAKST 241 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + +S S K +++A +A + G+RTILF+DE+HR+NK+ QD LP IE G Sbjct: 242 DYRYVELSGADSNAKSLKDAFAQADNLKKLTGQRTILFLDEIHRYNKAVQDLLLPVIERG 301 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED----KTRGYGGQD 189 T T IGATTENPSF LN+ALLSR ++++ L+T + ++L +A+ D + + Sbjct: 302 TCTVIGATTENPSFNLNNALLSRLHTFVMEPLTTTAVVRILHRALYDINQLRKNLFQLHY 361 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA-----GER 244 + L + IAEL GD+R ALN LE + S K K EL T++A E Sbjct: 362 MTLENGAFTYIAELCMGDSRVALNILETVNAYL---SSAK--FKTELQTKVAQETKPQEE 416 Query: 245 SARFDNKGDR-------------------------------------------------F 255 AR + DR Sbjct: 417 QARDEKVEDRHHGREGRGNHEEEGLTTPKQGVIKVSEYLLRQILQTRNFHQLYDRNGDGH 476 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 YD+ISA HKSVRGS DAA+++ ++++ G DPL++ RR + IASED+G D + + Sbjct: 477 YDVISAFHKSVRGSNADAAIFYLVKMLSGGEDPLFILRRMIVIASEDIGLRDSSCLPFMV 536 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD---VPVHL 372 AA + VG EGE +A LA APKS Y + + A A +E P+ VP HL Sbjct: 537 AAKEAVEFVGMPEGEIILAHCANKLARAPKSTKSYRSLRTAQAYIQEHPEITRLPVPFHL 596 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 RNAPTK MKEMG+G EY+Y N ++YFP + + ++ T+ G Sbjct: 597 RNAPTKFMKEMGFGDEYKYNPRYENGIVR-QLYFPEGMEEPKFLEDTHLG 645 >UniRef50_B2THM3 ATPase, AAA family n=25 Tax=Clostridiaceae RepID=B2THM3_CLOBB Length = 428 Score = 271 bits (694), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 153/419 (36%), Positives = 230/419 (54%), Gaps = 18/419 (4%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 PLA MRP + ++GQ+H+L PL I++ + + I +GPPGTGKTTLA ++A+ Sbjct: 1 MSPLADLMRPSKIEDFVGQRHILGENTPLYNLIKSKKICNCIFYGPPGTGKTTLANIMAK 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIE 131 Y + +++A T+ VK+I+ N AG +L++DE+ FNK QQ + L IE Sbjct: 61 YVDKKFYKLNATTASVKDIQNITNELDNLLNYAG--VVLYIDELQHFNKKQQQSLLEFIE 118 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 DG IT I +TTENP F ++ A++SR ++ + L DI L ++++ G ++ Sbjct: 119 DGRITLIASTTENPYFVIHKAIISRCNIFAFEPLIISDIIVGLEKSLDKLIN--EGIEVT 176 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPEL---LTEIAGERSARF 248 +E + IAE+ GD R+A N LE+ + + L E+ E G+ + R Sbjct: 177 YSNEALKYIAEISQGDYRKAYNILELSIN-------SQMTLHKEISVDYIEKLGQSNMRA 229 Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 DN GD FY+L+SAL KS+RGS DAA+++ AR+I GG+ + RR I +ED+G A P Sbjct: 230 DNSGDEFYNLLSALQKSIRGSDSDAAIHYLARLI-KGGNIAAIIRRISVIVAEDIGLAHP 288 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDV 368 A+ V + D +VG E +A+ ++YLA PKSN+ Y A +A+ D DV Sbjct: 289 NALTVVNSGLDLAMKVGFPEARIVLAELVIYLATLPKSNSAYLAINSAMNDLESINFGDV 348 Query: 369 PVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 P HL++ + +G G Y+Y HD N Y E Y P E+ + RYY N E I Sbjct: 349 PKHLKDGHYAGAESLGVGG-YKYPHDYPNHYIKQE-YLPTELKKKRYYIEQNNKYEENI 405 >UniRef50_C5K6M1 Werner helicase interacting protein, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K6M1_9ALVE Length = 622 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 165/365 (45%), Positives = 223/365 (61%), Gaps = 28/365 (7%) Query: 52 SMILWGPPGTGKTTLAEVIARYANAD-----VERISAVTSGVKEIREAIERAR--QNRNA 104 SMI WGPPG GKTTLA+++ R ++SAV +GV ++ I +A + + Sbjct: 171 SMIFWGPPGCGKTTLAQLLCRSLTQSGLPWRHTKLSAVNAGVNDVGLEIPKAESMEGKVT 230 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKS 164 T+LF+DE+HRFNK+QQDA LPH+E GT+T IGATTENPSF+ N AL+SR +V S Sbjct: 231 ISGTLLFLDEIHRFNKAQQDALLPHVESGTLTLIGATTENPSFQCNRALVSRCQVIKFSS 290 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETR----RAIAELVNGDARRALNTLEMMAD 220 L+++ I ++L +A+ Y Q V DE+ R +AE GD R +LN LE+ D Sbjct: 291 LTSDSIGRILRRALTS----YYPQVAV--DESTGDLLRILAEFGMGDVRASLNALELACD 344 Query: 221 MA-------EVDDSGKRV--LKPELLTEIAG-ERSARFDNKGDRFYDLISALHKSVRGSA 270 +A E SG R ++ + T +G R +D GD YDL SAL KS+RGS Sbjct: 345 LAMMGPRCGEAASSGLRREHIEEAMATSSSGRHRLLGYDKNGDIHYDLASALQKSIRGSD 404 Query: 271 PDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGE 330 DAA YW R++ G P YV+RR + IASEDVG ADP+A+Q+A AA G E Sbjct: 405 KDAAAYWTTRMLLGGEPPEYVSRRLMRIASEDVGLADPQALQLAAAAHTVTMSTGMPECS 464 Query: 331 RAIAQAIVYLACAPKSNAVYTAFK-AALADARERPDYDVPVHLRNAPTKLMKEMGYGQEY 389 A+ + +YL APKSNAVY A+K A+ A + D +VP+HLRNAPT LMKE+GYG++Y Sbjct: 465 TALLEVALYLCDAPKSNAVYVAYKNASKAIEKATTDSEVPLHLRNAPTGLMKELGYGRDY 524 Query: 390 RYAHD 394 Y ++ Sbjct: 525 IYTNE 529 >UniRef50_A6LJD0 AAA ATPase, central domain protein n=3 Tax=Thermotogaceae RepID=A6LJD0_THEM4 Length = 410 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 153/421 (36%), Positives = 239/421 (56%), Gaps = 23/421 (5%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 L+ +RP+ ++IGQ+HL + AIE+G+L S + +GPPG GKT+ E+I + + Sbjct: 4 LSEILRPKGFEEFIGQEHLFGEKGLIRLAIESGNLFSAVFYGPPGCGKTSTLEIIRKKTD 63 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 ++ +A + ++++ ++ A++ + ++ ++FVDE+HRFNK QQD FLP IE G Sbjct: 64 FEIYHFNAAVTSTIDVKKVLDYAQKVKGL-KKMLIFVDEIHRFNKKQQDIFLPGIERGDY 122 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 FIGATTENP +N ALLSR +V K L +I+++L +A+ K +I + + Sbjct: 123 IFIGATTENPFKMINPALLSRIKVIAFKKLKVFEIKKLLERAISVK-------NIDVMES 175 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 I + +GDAR A+N ++++DMA+ GK ++ E++T GE + +K Sbjct: 176 VMDFITRISDGDARFAINIYDVLSDMAKA--LGKEIVDDEIVTLYGGEVKMVYTSK--EH 231 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 Y+L SA KS+RGS PDAALY+ AR++ G DP ++ARR +ASEDVG ADP A+ +AI Sbjct: 232 YELASAFIKSIRGSDPDAALYYMARMLEVGEDPRFIARRLAILASEDVGLADPMAILIAI 291 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 A VG E +++ ++YL+ APKSN+ A A+ ARE + VP +L N Sbjct: 292 ATAQAVELVGLPECVLNLSECVIYLSLAPKSNSSTLAISKAIESARETMNLSVPFNLLN- 350 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 +K+ GY + Y + Y P I+ +Y P G E ++ E L L Sbjct: 351 ----VKDSGYKNPHHYGGFLKKS------YLPKGISDKVFYIPKEIGKEKRLKEILEKLW 400 Query: 436 E 436 E Sbjct: 401 E 401 >UniRef50_Q04QW6 Holliday junction resolvase helicase subunit-like ATPase n=4 Tax=Leptospira RepID=Q04QW6_LEPBJ Length = 423 Score = 264 bits (674), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 163/451 (36%), Positives = 237/451 (52%), Gaps = 37/451 (8%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQ----QHLLAAGKPLPRAIEAGHLHSMILW 56 MS+L F+ PLA ++RP + IGQ + L+ P+ S+IL+ Sbjct: 1 MSDL---FTKKPIPPLAHKIRPSGFEEVIGQTRATKQLVNYRSPV----------SIILY 47 Query: 57 GPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVH 116 GPPGTGK+TLA ++ R N +AV++GV EI++ +ERA + +LF+DE+H Sbjct: 48 GPPGTGKSTLAGILCRKWNLPFVEYNAVSTGVSEIKKLLERAEREGT----ILLFLDEIH 103 Query: 117 RFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 RF+ SQQD+ L +E G + IGATTENP+F + LLSR ++ ++ LS E+ +L + Sbjct: 104 RFSASQQDSLLKGVETGHLVLIGATTENPAFRITRPLLSRCQILKIEPLSWEEQSLLLER 163 Query: 177 AMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPEL 236 +++ I L + + GD R+ L+ LE ++ + Sbjct: 164 GIQNLE-----YSIHLNPGAKETLIRFSGGDGRKLLSNLEGLS----FSFPENHTISKSD 214 Query: 237 LTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCL 296 + E R +D G+ YD+ISA KSVRGS PDAALY+ A ++ G DPL++ RR + Sbjct: 215 VEEYLESRVIEYDKSGESHYDVISAFIKSVRGSDPDAALYYLAVLLEGGEDPLFIMRRLI 274 Query: 297 AIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA 356 +ASEDVGNA + +A++ +G EG +A +LA PKSNA Y AA Sbjct: 275 ILASEDVGNASVNGLPLAVSGLHALEAIGMPEGRLVLAHVTTFLASCPKSNASYKGIGAA 334 Query: 357 LADARER-PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQT-- 413 L+ RE+ +P LRNAPT L K+ G Q Y Y HD + YFP E A+ Sbjct: 335 LSFVREKGTGIKIPNRLRNAPTFLHKKEGASQGYLYPHDFGGFKE--QNYFPDEFAENPP 392 Query: 414 RYYFPTNRGLEGKIGEKL--AWLAEQDQNSP 442 R+YFPT G E K+ E L W ++ P Sbjct: 393 RFYFPTGNGAELKLKEYLDRVWEKFSSRDDP 423 >UniRef50_UPI0000E4A039 PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A039 Length = 672 Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 159/394 (40%), Positives = 222/394 (56%), Gaps = 57/394 (14%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 F+PLA RMRP + IGQ L A L R ++ G++ SMI WGPPG GKT+LA VIAR Sbjct: 269 FRPLAERMRPYTMDTLIGQNKALGATGTLRRLLDVGNIPSMIFWGPPGCGKTSLANVIAR 328 Query: 73 YANA-DVERI---SAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFL 127 A + R SA TS V +++ A+E AR + R R+TILF+DE+HRFNK+QQD FL Sbjct: 329 QAKVRNTHRFITFSATTSNVSDVKSAVEIARNEQRMYRRKTILFIDEIHRFNKTQQDTFL 388 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 H+E+GTI IGATTENPSF +NSALLSR RV +L+ LS E I +L +A+++ G Sbjct: 389 LHVENGTIILIGATTENPSFRVNSALLSRCRVVVLEKLSPESIMLILERALKEGQVGIEN 448 Query: 188 QD----------IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK-----RVL 232 + I + E +A L +GDAR ALN+L+M+ D+A+ G+ +VL Sbjct: 449 AEHLHKTCWSTTISIEREALCLLANLCDGDARSALNSLQMVLDVAKGSTGGQQADASKVL 508 Query: 233 KPELLT----EIAGERS-ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGD 287 + ++T + +RS +D G+ Y+ SAL KS+R S +AA+YW R++ G D Sbjct: 509 RSSVITIDQIRDSLQRSHISYDKSGEEHYNCASALQKSIRASDANAAVYWLGRMLVGGED 568 Query: 288 PLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSN 347 PLY+ARR + ASED+ +A +YL+ APKS Sbjct: 569 PLYIARRLVVCASEDLN----------------------------LAHCAIYLSRAPKSR 600 Query: 348 AVYTAFKAALADA---RERPDYDVPVHLRNAPTK 378 V T + A + D + P +P+HL+ TK Sbjct: 601 QVATVY-ARVKDCLKNHQGPTPPIPLHLQTPATK 633 >UniRef50_A4EPD3 ATPase n=3 Tax=Rhodobacteraceae RepID=A4EPD3_9RHOB Length = 437 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 162/416 (38%), Positives = 236/416 (56%), Gaps = 12/416 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L + QPLAA +RP +L + +GQ+ L A G L R I A L S++L+GPPG Sbjct: 1 MSDLFDVGREQENQPLAAALRPRSLDEVVGQKTLTAKGSVLRRRIAANQLGSIVLYGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 GKT++A + N + +++ A +GVK+IR+ + AR R ++FVDEVHRF+ Sbjct: 61 VGKTSIARAVGEMLNKEFKQLHATRAGVKDIRQLADEARI-----RPILIFVDEVHRFSA 115 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +Q D L E+GT FIGATT+NP L AL+SR+ + L+ ++ ED+E VL + +E Sbjct: 116 TQADDLLSICEEGTADFIGATTQNPYTALPKALVSRSTILKLEPIAIEDMEAVLARGLEH 175 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 G ++VL E R IA GDAR AL TLE +A DSG + ++L E+ Sbjct: 176 LAEM--GIEVVLAPEQLRIIAGRSGGDARSALTTLESLA--IGHGDSGSVKVTDDMLEEV 231 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 D GD+ YD+ISA KS+RG P+A LYW AR+I G DP ++ARR + AS Sbjct: 232 YRAAPVNHDRSGDQHYDIISAFIKSMRGGDPEAVLYWLARLIHGGEDPRFIARRIMIQAS 291 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVG AD A+Q A+AA +G E +A A +++ APKS + AAL+ Sbjct: 292 EDVGLADNTALQTAVAAAQAVEMIGYPEARIILAHAALHVTRAPKSGSANHGISAALSAV 351 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 P VP+HLR+A + +++G+G YR H++ + + + P + R+Y Sbjct: 352 GSEPPLPVPLHLRDAHYQGAEQLGHGG-YRSPHNDPRGWV--DQTYAPGMQPGRFY 404 >UniRef50_UPI0001C3744E recombination factor protein RarA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3744E Length = 423 Score = 251 bits (641), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 150/404 (37%), Positives = 232/404 (57%), Gaps = 9/404 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA ++RP+ LA +GQ+H+LA GKPL R I++G + +MI +GP G GKTT+A +IA Sbjct: 4 PLADKIRPKTLADVVGQEHILADGKPLRRIIDSGTVPNMIFYGPSGVGKTTVARIIAENC 63 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + +++ + + +I++ + + +L++DE+ NK QQ + L +IE+G Sbjct: 64 GMSLYKLNGTNASISDIKDVVADI-GTFGSENGILLYLDEIQYLNKKQQQSLLEYIENGD 122 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA--MEDKTRGYGGQDIVL 192 IT I +TTENP F + +A++SR+ V+ K +S E + + +A + + GY + Sbjct: 123 ITLIASTTENPYFSVYNAVISRSTVFEFKPVSAEQLMPAIRRAFRIMSEENGYA---VEA 179 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ + IA GD R+A+NT E+ E D GK + + L +A + R+D G Sbjct: 180 SDDIIKQIAYSCGGDVRKAMNTAELAVVCGEASD-GKVAVTADSLKILAQRSNMRYDRDG 238 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D+ YD++SAL KS+RGS +AAL++ AR+I A GD + ++RR L IA+ED+G A P+A+ Sbjct: 239 DQHYDILSALQKSIRGSDENAALHYAARLIEA-GDIISLSRRLLVIAAEDIGLAYPQAIA 297 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + A D ++G E +A+AI+ LA APKSN+ A AA+AD R D P HL Sbjct: 298 ITKACVDSALQLGLPEARIPLAEAIILLATAPKSNSAEAAIDAAIADLRSCDALDFPRHL 357 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 +N GQ Y+Y HD N Y + Y P +A YY Sbjct: 358 QNKHFDGKGAAVVGQHYKYPHDYKNHYVKQQ-YLPDALAGHVYY 400 >UniRef50_UPI0000DB7733 PREDICTED: similar to Werner helicase interacting protein isoform 1 n=2 Tax=Apocrita RepID=UPI0000DB7733 Length = 433 Score = 251 bits (640), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 143/421 (33%), Positives = 221/421 (52%), Gaps = 26/421 (6%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA +MRP YIGQ+ ++ + L + + GH+ SMI WGPPG GKT+L +I++ + Sbjct: 15 LAEKMRPACFHDYIGQEKVVGSNTILQQLLTKGHIPSMIFWGPPGCGKTSLTNIISKISK 74 Query: 76 ------ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 ++ +SA +SGV I+ I + + + + I+ +D++HRFNK QQD FLPH Sbjct: 75 EMHGEKVNIINLSATSSGVSNIKNIINKTK-TESKFNQIIVIMDKIHRFNKLQQDIFLPH 133 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED--------K 181 +E GT T IG TTENPS+ LNSALLSR R++ L L+ +I ++L +A+ Sbjct: 134 VETGTFTLIGTTTENPSYSLNSALLSRCRIFALNKLTMLNIVEILCKAISSINGEIYNFS 193 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD--DSGKRVLKPELLTE 239 + + + +AE+ +GDAR ALN LE+ + + +S + E + E Sbjct: 194 LKNFSKPHFFINKTAIDWLAEVCDGDARVALNDLELAIKIKISNKLNSNFVSITLEDVKE 253 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + D + + L SALHKS++ +A+LYW ARI+ DP+ +ARR + I+ Sbjct: 254 SVKQTHMLSDKQSNNIQHLYSALHKSIKAGKENASLYWLARIMDIKEDPVDIARRLIRIS 313 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA--L 357 SEDVG AD A+ +AI +G E + + Q +VYL APKS VY A K + Sbjct: 314 SEDVGLADLDALGIAIHTLHGCEMIGMPECDVILTQCVVYLTRAPKSQLVYNALKRVENI 373 Query: 358 ADARERPDYDVPVHLRN--APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 + P VP+H+R+ K+ G+ +E +E E Y P + + Sbjct: 374 IINHKGPQPVVPLHIRDRSGQEKIHTTFGFHKENVLTKEE-----NVENYLPLGLLHANF 428 Query: 416 Y 416 + Sbjct: 429 F 429 >UniRef50_B1HUL5 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=B1HUL5_LYSSC Length = 420 Score = 249 bits (635), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 150/425 (35%), Positives = 228/425 (53%), Gaps = 11/425 (2%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 MRP L + +G Q + L + I+ H+ SM+L+G PG GKT++A IA + Sbjct: 1 MRPLTLDEIVGHQDFIGPNTALYKMIQNEHVPSMLLYGEPGIGKTSIANAIAGSSQLPFF 60 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 ++A +G K++ + ++ AR + +LF+DE+HRFNK QQD LPH+E+G+I IG Sbjct: 61 ALNATRAGKKDVEDIVQEAR----ISGKVLLFLDEIHRFNKLQQDTLLPHVENGSIVLIG 116 Query: 140 ATTENPSFELNSALLSRA-RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRR 198 ATTENP ++N A+ SR +Y LK L+ E++ +++ +A+ D+ RG G +L D Sbjct: 117 ATTENPYHDVNPAIRSRCGEIYQLKRLTKENLMELVEKALADEKRGLGKYHFILTDSQIE 176 Query: 199 AIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDL 258 IAE NGDAR+AL LE + A + G + ++ + D KG FY+L Sbjct: 177 RIAEAANGDARKALTLLESIY-YASDEVEGPTIAADHIIDHLISRIGVYGDKKGSHFYNL 235 Query: 259 ISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAW 318 +SAL KSVRGS +AALY+ A ++ GD + V+RR L +A ED+G A+P +AA Sbjct: 236 LSALQKSVRGSDTNAALYYLAHLLET-GDLVAVSRRLLVMAYEDIGLANPEVGPHMLAAV 294 Query: 319 DCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTK 378 R+G E +A A++ + A KSN+ A A+ + +P HLR+A Sbjct: 295 QAAERLGLPEARIPLASAVIEMCLASKSNSAILAIDEAIKAIHDGKTGGIPHHLRDAHYA 354 Query: 379 LMKEMGYGQEYRYAHDEANAYAAGEV---YFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 K++G+ Y+Y H+ G V Y P E+ T +Y P G E ++ L Sbjct: 355 GAKDLGH-VGYQYPHNTPIGTFGGWVDQQYLPDELVGTEFYKPVVAGEEKRMASIYEKLK 413 Query: 436 EQDQN 440 QN Sbjct: 414 SFHQN 418 >UniRef50_B1KXC3 ATPase, AAA family n=17 Tax=Clostridium RepID=B1KXC3_CLOBM Length = 416 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 144/414 (34%), Positives = 224/414 (54%), Gaps = 16/414 (3%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA MRP+ L ++GQ+H+L+ KPL ++ + + I +GPPGTGKTTLA ++A Y Sbjct: 2 RPLADLMRPKKLEDFVGQKHILSENKPLYNLMKNKSICNSIFYGPPGTGKTTLANIMANY 61 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + R++A T+ +K+I+E N +L++DE+ F K QQ A L IEDG Sbjct: 62 VDKKFYRLNATTASIKDIQEITSSINSLLNYS-GVVLYIDELQHFTKKQQQALLEFIEDG 120 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME---DKTRGYGGQDI 190 + I +TTENP F ++ A+LSR ++ K L+ EDI L +A+ DK G +I Sbjct: 121 RVILIASTTENPYFVIHKAILSRCNIFQFKPLNREDIILGLEKAINKLIDK-----GINI 175 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 E+ I E+ GD R+A N LE+ + G + E + + R D Sbjct: 176 KYSFESLEYIGEICQGDYRKAYNILELAVN----SHCGFNIEITLDYIESLAQSNIRADA 231 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 GD +Y+++SA KS+RGS DAA+++ AR+I + GD + RR + +ED+G A P A Sbjct: 232 TGDEYYNILSAFQKSIRGSDADAAVHYLARLIKS-GDITSITRRLSVMVAEDIGLAYPNA 290 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + + + + +VG E + +++ +YLA PKSN+ Y A K A+ D DVP Sbjct: 291 LTIVNSGIELALKVGFPEAQIILSEITIYLATLPKSNSAYIAIKNAMRDLESVNFGDVPD 350 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLE 424 +L+++ K +G + Y+Y HD N Y + E Y P E+ YY + E Sbjct: 351 YLKDSHYHGAKNLGV-EGYKYPHDFNNHYVSQE-YLPKELKDKVYYIAQHNKYE 402 >UniRef50_C7H148 ATPase, AAA family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H148_9FIRM Length = 411 Score = 246 bits (629), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 150/419 (35%), Positives = 234/419 (55%), Gaps = 30/419 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 P + +RPE L +IGQ+H L + AI+ G S + +GP GTGKTTLA +IA+ Sbjct: 3 PFSTYVRPERLEDFIGQEHFLKKNALVYNAIKEGRFESAVFYGPSGTGKTTLARIIAKMQ 62 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAG---RRTILFVDEVHRFNKSQQDAFLPHIE 131 + +I+A G+ E+++ + A+ +R G + T L+VDE+HR+NKSQQD+ L +E Sbjct: 63 DDSFIQINAADVGISELKKILAEAK-DRFYGIISKSTYLYVDEIHRWNKSQQDSLLSALE 121 Query: 132 DGTITFIGATTENPSFELNSALLSRAR-VYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 +G I I +TTENP FE+N+ +LSR R +Y K L+ +DI ++L + ++ G+ I Sbjct: 122 EGYIKVIASTTENPFFEINNQILSRIRNIYEFKPLANDDIVKLLKRGVD--IFAGDGRVI 179 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 ++ IAE NGDAR AL+TL + + + G+ + E + EI +R N Sbjct: 180 DYDEDALMLIAEKSNGDARIALDTLGFILNSLK----GEDRITEEKVYEITYDRQYMKFN 235 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 K D Y++ SALHKS+RGS PDAA+++ AR++ G D + RR L ASEDVG A P+A Sbjct: 236 KLDDKYNVFSALHKSMRGSDPDAAVHYLARLLQGGEDVKVIGRRLLVAASEDVGLAYPQA 295 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + + + + +G E ++QA+V ++ APKS + Y A +A+ + + DVP Sbjct: 296 IGIVRSCVEAAHMLGMPEARIPLSQAVVLISLAPKSRSTYNAINSAIEEIKTGRIDDVPD 355 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ--TRYYFPTNRGLEGKI 427 H+RN H+ +A + + P + + RYY P++ GLE I Sbjct: 356 HIRN-----------------FHNNNDANRPADQFLPDNLYKKGVRYYVPSDNGLEKDI 397 >UniRef50_B0EGY1 ATPase WRNIP1, putative n=2 Tax=Entamoeba RepID=B0EGY1_ENTDI Length = 482 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 142/414 (34%), Positives = 227/414 (54%), Gaps = 51/414 (12%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 D ++ PLA R RP+ L IGQ+ + G P I L S IL+GPPG+GKTT+A + Sbjct: 25 DISYIPLAERQRPKRLEDIIGQESAIGIGTPFNSMILNDSLQSTILFGPPGSGKTTIARI 84 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQDAFLP 128 I +N+ +IS+VT+ +E++ IE+A++ + ++ TILFVDE+H NK QQD FLP Sbjct: 85 IKNMSNSFFVQISSVTTSKEELKNVIEQAKERKKREKKDTILFVDEIHTLNKLQQDIFLP 144 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 IE+G+I IGATTENPSF+LN+AL+SR + +LK L E I +++ +A++++ Y Sbjct: 145 AIENGSIILIGATTENPSFQLNNALMSRCNLVILKRLENESINKIIKKAIKEE---YQNN 201 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMM---------ADMAEVDDSGKR--------- 230 ++ + I++ +GDAR LN LE + ++ E+ S + Sbjct: 202 KFIIDEAGINIISKYADGDARNGLNCLEFIFNYFNHLSEEELKEIIKSNESENNTIIIDE 261 Query: 231 -----------------------------VLKPELLTEIAGERSARFDNKGDRFYDLISA 261 L E++++ +++ ++D G+ Y+ ISA Sbjct: 262 NDCTISKKNELENTELSYQTIEEPEVIHITLTSEIISKFLQKQNFQYDKSGEDHYNTISA 321 Query: 262 LHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCF 321 HKS+RG +AA+YW R+I +G +P YVARR + A+ED+G AD AM VA+ + Sbjct: 322 FHKSMRGGDENAAVYWLGRMIFSGENPKYVARRMIRFATEDIGLADTNAMVVAMNTFQAV 381 Query: 322 TRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 +G + + +A+ +YL A KS A+Y A +E+P+Y VP+ + + Sbjct: 382 EILGYPDCKTVLAECCLYLTRAKKSTAIYKATLTLKKMVKEQPNYIVPIRVSTS 435 >UniRef50_A9BGH8 AAA ATPase central domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGH8_PETMO Length = 411 Score = 243 bits (621), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 149/429 (34%), Positives = 236/429 (55%), Gaps = 25/429 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPL +RP+ + + +G + L + L I+ + S I++G PG+GK+T+ + Sbjct: 5 QPLYEIIRPKKVDEVLGNEKL---KEILKTWIKNKKVRSFIIYGEPGSGKSTIVRALINE 61 Query: 74 AN--ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 DV IS G K+I++ IE+ +N + +LFVDE+HR NK++QD L +E Sbjct: 62 IKDYYDVFSISGAIEGKKKIKDIIEQ--KNNLFTKPKLLFVDEIHRLNKAEQDTLLLSVE 119 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 G +T IGATTENP+ +N ALLSR V+ K L T+D E+ L Q +ED + D+ Sbjct: 120 TGELTLIGATTENPAISVNPALLSRVLVFKTKELITDDYEK-LFQQIEDYYK-----DLK 173 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + E R+A+ E D RR +N +E +++G + E L + G R +D Sbjct: 174 ITKEARKALIEYAGNDIRRIMNLIET------ANEAGINSIDLEFLKDFTGYRLT-YDKN 226 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 Y ISA KS+RGS DAAL + A ++ +G DP+Y+ARR + +++EDVG ADP A+ Sbjct: 227 AK--YSFISAYIKSMRGSDVDAALLYLAYMLESGEDPMYIARRMVILSAEDVGLADPNAL 284 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A++A VG E +++A +YL +PKSN+ Y A+ A + + ++++P Sbjct: 285 NIAVSAMIATEHVGYPECYLPLSEATMYLCSSPKSNSAYLAYAKA-KEFISQNNFEIPPK 343 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 L N K M++ G+G+ Y+Y HD E Y P T+++ P G+E +I E+L Sbjct: 344 LINPLNKRMEKQGFGEGYKYPHDYGG--FVRESYMPEGFESTQFFTPKEIGIEKRIKERL 401 Query: 432 AWLAEQDQN 440 L + +N Sbjct: 402 KDLWKDKKN 410 >UniRef50_A2QW62 Function: WHIP of M. musculus is involved in aging control n=3 Tax=Aspergillus RepID=A2QW62_ASPNC Length = 513 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 133/371 (35%), Positives = 209/371 (56%), Gaps = 14/371 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA ++RP +GQ+ L+ L R IE L ++ILWGPPG+GKTT+A +I Sbjct: 105 PLAEQVRPRCFDDIVGQKSLIGPNGTLRRLIEQDELPNLILWGPPGSGKTTIARIIGPMM 164 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGR-RTILFVDEVHRFNKSQQDAFLPHIEDG 133 V IS++T+ E R+ + +A + GR ++I+F DE+HR + QQD FL + Sbjct: 165 RRKVYEISSLTTITTEYRDIVTKATHD---GRNKSIIFCDEIHRLTRPQQDIFLDAMRRN 221 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 IT IGATTENPS ++ L+ + RV+ + +T D+ +L +++ +T + +L Sbjct: 222 KITLIGATTENPSLNIHHTLVYKCRVFTVAKPTTTDLATILRRSLISQT--HLKSSPLLD 279 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 DE + IA +GD+R ALN LE+ D+ + K LK L +S +D GD Sbjct: 280 DEFLQYIAGFADGDSRTALNVLEIATDLCRRPNMTKEKLKYSL------TKSLLYDRSGD 333 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD ISALHKS+RGS PDAALY+ R++ +G +PL++ARR + SED+G A+ Sbjct: 334 QHYDTISALHKSIRGSDPDAALYYLVRMLQSGENPLFIARRLIVATSEDIGLANNVLQTY 393 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE--RPDYDVPVH 371 A + + ++G + + A+AQ ++ + + KS Y ALA +E D +P H Sbjct: 394 ATSIYLMIEKLGINDAQSALAQLVITMCLSKKSTRSYRGLNNALAAVKEPGMGDLPIPFH 453 Query: 372 LRNAPTKLMKE 382 + + +L++E Sbjct: 454 ILDRRPELLRE 464 >UniRef50_C5NXY2 Replication-associated recombination protein A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXY2_9BACL Length = 415 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 142/418 (33%), Positives = 224/418 (53%), Gaps = 15/418 (3%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 + L ++RP + IGQ HL+ GK L + +E+ + S IL+GPPGTGKT++A +A Sbjct: 2 ETLINKLRPSKIDDIIGQHHLIGDGKVLTKIVESKKMFSFILYGPPGTGKTSIANALANE 61 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + + ++AV K++ IE +++ ++ IL +DE HR K QD LP IE Sbjct: 62 LDYKFKILNAVNCTKKDLTAVIEESKR----FKKVILLLDEFHRLTKPMQDILLPEIEFD 117 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IG TT NP +N A+ SR ++ L+ +S +DI + L + +K +D+ + Sbjct: 118 NIYVIGCTTNNPYHTVNPAIRSRLIIFELQQVSNDDIYEYLKKISNNKE--IFPKDLKIE 175 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ + IA +GD R +LNT E++ +++ + G+ + K +LL G+ A +D GD Sbjct: 176 DDVFKTIALNSSGDLRFSLNTFEILYNLS---NEGEIITKDKLLNLSLGKFKA-YDKDGD 231 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGG-DPLYVARRCLAIASEDVGNADPRAMQ 312 FYD+ISA KS+RGS DA+LY+ A +I +G D +Y RR IA ED+G A+P Sbjct: 232 AFYDIISAFQKSIRGSDVDASLYYLALLIDSGDLDTIY--RRMSVIAYEDIGLANPNIGP 289 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 AA + +G E +A A++ LA + KSN+ Y A AL + + P + +P HL Sbjct: 290 FVHAAIESAKMLGLPEARIPLANAVIQLALSLKSNSAYMAIDNALHETKTNPKFIIPDHL 349 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP-TNRGLEGKIGE 429 R+A ++ G Y+Y H Y + Y P + +Y P TN E + + Sbjct: 350 RDAHYYGADKLNRGVGYQYPHSHPTGYIKQQ-YLPDNLVGRTFYTPKTNNKNEQNLAQ 406 >UniRef50_Q5KCD2 Helicase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KCD2_CRYNE Length = 397 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 130/328 (39%), Positives = 183/328 (55%), Gaps = 40/328 (12%) Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKS 164 GRRT+L +DE+HRFN++QQD LP++E G I IGATTENPSF++N ALLSR +V+ L + Sbjct: 3 GRRTVLMIDEIHRFNRAQQDLLLPYVEKGWIQLIGATTENPSFKVNGALLSRCQVFTLHA 62 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 S E ++ +L A++ T LP +A++ +GDAR+ALN LE+ + Sbjct: 63 HSPESLQIILRNAVQ--TISESEPIPYLPSGLIPFLADVADGDARQALNGLELALRTCQT 120 Query: 225 DDSGKRVLKPELLTEIAGERSAR------------------------------------- 247 D K + + +GE+ + Sbjct: 121 MDETASAEKAQRVNSASGEKMEKEGQKDEFDAAVEEAEEDYQKKKRDEEIMDAVRRGLQK 180 Query: 248 -FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 ++ G+ YD+ISALHK +RGS AA+YW AR+IT G DPLY+ARR + +ASEDVG A Sbjct: 181 GYNRTGEERYDMISALHKCLRGSDGSAAMYWLARMITGGEDPLYIARRLIVVASEDVGLA 240 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 D A+ +A+A + +G E +A + YLA APKS Y A+ AA A P Sbjct: 241 DNHALPLAMATYQACQTIGLPECRINLAHCVAYLAEAPKSTRSYKAYAAAEQLATMPPLP 300 Query: 367 DVPVHLRNAPTKLMKEMGYGQEYRYAHD 394 VP+ +RNAPT+LMK++GYG+EY Y D Sbjct: 301 GVPLQIRNAPTQLMKKLGYGKEYAYNPD 328 >UniRef50_C1SKW4 AAA ATPase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKW4_9BACT Length = 426 Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 143/415 (34%), Positives = 213/415 (51%), Gaps = 24/415 (5%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 +RP GQ+HL+ + +E G S++L GPPGTGKTTLAE+I ++ N Sbjct: 7 LRPRAFDDIAGQKHLIGVDSVFRKMVEDGGFDSVVLVGPPGTGKTTLAEIIGKHLNMPYF 66 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 + A T+G ++++ +E AR +AG+ ++FVDE+HRFNK+QQ L I+ G IG Sbjct: 67 SLHAATAGSGDLKQIMESAR---HAGKTVLVFVDELHRFNKTQQVLLLNMIDSGLAKLIG 123 Query: 140 ATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRA 199 A+TENP L L SR+ V+ L+ L D++++ + Y D+V D+ Sbjct: 124 ASTENPYHNLIQPLRSRSFVFRLERLEKPDLKELFEKVKLYFKERYKADDVVCTDDEFDR 183 Query: 200 IAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLI 259 + + +GD RR L+ LE+ A D VL + + +R++ D YD++ Sbjct: 184 LVKASDGDGRRFLSVLELSAVNGSFKDD---VLHLGVSKALEHTTDSRYN--ADEHYDML 238 Query: 260 SALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 SA+ KS+RG+ PDAA W R++ G +P + RR L ASED+GNA P +A+ Sbjct: 239 SAMIKSIRGTDPDAAALWCFRLLECGMEPEAIFRRLLISASEDIGNAFPXXXXXXXSAYS 298 Query: 320 CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKL 379 F VG EG+ +A I YLA PKSN Y A A +E + + P N P L Sbjct: 299 AFQAVGRPEGDIILAHVITYLASCPKSNRSYKAMWA----VKEYLENNTP----NVPYPL 350 Query: 380 MKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 E G+ Y Y D + + E+ +Y P++ G E KI E+L L Sbjct: 351 RTE---GKGYHYPFDHG-GFVVQDYSGTDEV----FYDPSDAGFEMKISERLKRL 397 >UniRef50_A9NGG4 Holliday junction DNA helicase-like ATPase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGG4_ACHLI Length = 412 Score = 220 bits (560), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 133/408 (32%), Positives = 217/408 (53%), Gaps = 21/408 (5%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA+RMRP+N + GQ HLL+ L + IE S IL+GPPGTGKTT+A++ + Sbjct: 1 MEPLASRMRPKNFDEVYGQDHLLSKHGVLTKMIEKKKYLSFILYGPPGTGKTTIAKLFSD 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + D +A T ++++ ++ A ++ VDE+HR QD LP +E Sbjct: 61 KSMLDTYFFNASTDNKAKLKDILDMT-----AYHDVLIIVDEIHRMKTDIQDYLLPFLES 115 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IG TT NP +N A+ SR +Y +K+LS +DIE + A++ Y DI L Sbjct: 116 GKAIMIGLTTLNPYQSINMAIRSRCHLYEIKALSDKDIEAAILNAIQ-----YLDHDIHL 170 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ AI N + R ALN LE + V D G+++ ++ ++AG+ D+ Sbjct: 171 TDDALAAIIRASNSEIRSALNLLE---SASLVVDDGQKI-TSNIIRKLAGKPQLSLDDHE 226 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + +++++SAL KS+RGS DA++++ AR++T GD + RR + IA ED+G A+P Q Sbjct: 227 NHYFEMLSALQKSIRGSDVDASIHYLARLLTL-GDLEIIFRRLIVIAYEDIGLANPTMGQ 285 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +AA G E ++ +V +A +PKSN Y+A A+ D + +P H+ Sbjct: 286 KVLAAIQAAKMTGLPEARIPLSVIVVDMALSPKSNTAYSALDKAMEDFQNGLAGPIPKHI 345 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 N K +K+ + Y+Y H++ + + + + P + YY P + Sbjct: 346 DN---KYIKQ--HPDSYKYPHNDPGSLNS-QTHLPDNLLDKTYYVPKD 387 >UniRef50_B3PM47 ATPase, related to the helicase subunit of the Holliday junction resolvase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM47_MYCA5 Length = 402 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 143/421 (33%), Positives = 220/421 (52%), Gaps = 38/421 (9%) Query: 16 LAARMRPENLAQYIGQ--QHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 LA + RP L ++ Q L + I S I +G PGTGKTT++ ++A Sbjct: 5 LAQKTRPIALDDFVCNDSQRFL-----FEKIIANDDFRSFIFYGKPGTGKTTISYILASS 59 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + +A +++ + + + + N+ IL +DE+HR NK +QD LP+IE+ Sbjct: 60 LKVSFDYFNA---AIEKKEDLVAKLKLNK------ILIIDEIHRLNKDKQDILLPYIEND 110 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ-AMEDKTRGYGGQDIVL 192 IT TTENP F++N AL SR + +K+ S +D+ + L + A+ ++ D L Sbjct: 111 LITIYATTTENPYFKVNPALRSRCAIVEIKNPSIDDLSKQLKKIALNNQL------DSNL 164 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVD----DSGKRVLKPELLTEIAGERSARF 248 DE IA NGD R A+N+L++++ +++ D K++L P + + G Sbjct: 165 SDEIYHFIASQSNGDYRSAINSLDLISTLSKTKKLTLDEIKKIL-PAI--QFTG------ 215 Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 D+ GD +D +SA HKS+RGS P+AALY Y I+ GD + RR + A EDVG A+P Sbjct: 216 DSNGDAHFDHLSAFHKSLRGSDPNAALY-YGFILVESGDFDGLFRRMICAAYEDVGLANP 274 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDV 368 + A D F R+G EG IA AI+ +A +PKSN+ Y A+ + L D R ++V Sbjct: 275 NLPVQVMNAIDAFERLGLPEGYLPIANAILEIALSPKSNSAYLAYHSVLEDLRSGQLFEV 334 Query: 369 PVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIG 428 P HL+++ K++ G EY Y H+ Y + Y P E+ +YY G E KI Sbjct: 335 PNHLKDSSYSSAKKLKRGVEYLYPHNFDRHYVKQD-YLPSELKNKQYYCSQKEGFEEKIN 393 Query: 429 E 429 E Sbjct: 394 E 394 >UniRef50_C6HUJ9 AAA ATPase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUJ9_9BACT Length = 451 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 147/425 (34%), Positives = 217/425 (51%), Gaps = 17/425 (4%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY- 73 PL RMRP +L +GQ+ LL R I G SM+L+GPPGTGK+ E++ R Sbjct: 14 PLPYRMRPSSLEDLVGQEALLGPQGLFRRFIAEGRWPSMVLFGPPGTGKSGFVELLPRLL 73 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 ++ ++A T+GV ++R + R + R G + ++ +DE+H ++KSQQ+ L +E G Sbjct: 74 SDHTFAHLNATTAGVADLRPELARGERRRREGGQHVVVLDEIHTWSKSQQEVLLSGVETG 133 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I +G + P L L SR ++ + L + +L + + R G + L Sbjct: 134 QIILLGLSNTTPYAALIPPLASRLLLFPFQPLDENALSTLLDRGLHRLARETHGPPLQLD 193 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK-----RVLKPELLTEIAGERSARF 248 R + GD RR L LE MA SG+ RV + ++L ++ R+ + Sbjct: 194 PAARSLLVRYSGGDGRRLLLALESAVLMA----SGRGGEEFRVGEEDVLAILS--RAGQV 247 Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 D YD ISA KSVR PDAAL+W AR+I G DPLY+ARR + +A+EDVG ADP Sbjct: 248 YGDKDSHYDTISAFIKSVRNYDPDAALHWLARMIEGGEDPLYIARRLVILAAEDVGLADP 307 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDV 368 +A+ A++ + VG EG +A V+LA +PKS + Y A ALAD R V Sbjct: 308 QALTQAVSCFHAVREVGLPEGRIPLAMTTVFLALSPKSISAYQAIDRALADVRGGFVPPV 367 Query: 369 PVHLRNAPTKLM---KEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 P+HLR+ +K E +Y Y D+ + PE RYY P +RG E Sbjct: 368 PLHLRDRTSKRAFSRDEATTPLDYLYPPDQPGGVSPQSHL--PEGESRRYYLPNDRGRER 425 Query: 426 KIGEK 430 ++ E+ Sbjct: 426 ELKER 430 >UniRef50_D1B0W0 AAA ATPase central domain protein n=5 Tax=Campylobacterales RepID=D1B0W0_SULD5 Length = 396 Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 130/380 (34%), Positives = 205/380 (53%), Gaps = 28/380 (7%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 A RP+ + + GQ+HL P + +++G + + +GP G GKTTLA ++A Sbjct: 5 FALFFRPKVIEELSGQKHLSGENSPFRKLLKSGSMSHALFFGPAGVGKTTLARIVANTLQ 64 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + A + V+EIR+ + Q+R A ++ ++F+DE+HR +K+QQ+ L +E+ Sbjct: 65 LPFYELDATSIKVEEIRKILS---QHRGALQKPLIFIDEIHRLSKTQQEVLLLPMENHEA 121 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 IGA+TENP F L+S + SR ++ L +D+E +L + E + + +E Sbjct: 122 IVIGASTENPYFVLSSGIRSRMMLFEFYPLEMKDMEAILERVHEKI-------EFQIDEE 174 Query: 196 TRRAIAELVNGDARRALNTLEMMADM-AEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 R + GD+R LN LE + V+ + L+P L + G S DN Sbjct: 175 AREYLIRSSAGDSRSFLNLLEFALKVDLHVNMQTLKALRPSALKD--GVSS---DNTH-- 227 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 Y+LISA+ KSVRGS DAALY+ AR+I G P ++ARR + +ASED+GNA+P A+ +A Sbjct: 228 -YNLISAMIKSVRGSDVDAALYYLARLIDGGESPDFIARRLVILASEDIGNANPNALNLA 286 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 + +++G E ++Q ++YLAC+PKSN+ Y A ALA + +VP HL++ Sbjct: 287 SSTLMSVSKIGYPEARIILSQCLIYLACSPKSNSAYNAINQALAYVKNEKVLNVPEHLQS 346 Query: 375 APTKLMKEMGYGQEYRYAHD 394 K Y Y HD Sbjct: 347 PSPK---------GYLYPHD 357 >UniRef50_C2HPK6 Crossover junction endodeoxyribonuclease ATPase n=8 Tax=Lactobacillus RepID=C2HPK6_LACAC Length = 478 Score = 217 bits (552), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 139/417 (33%), Positives = 210/417 (50%), Gaps = 20/417 (4%) Query: 12 TF-QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 TF QPLA MRP+ L + +GQ HLLA GKPL + I+ L S++LWGPPG GKTTLA V+ Sbjct: 51 TFKQPLADLMRPKTLGEMVGQNHLLAKGKPLYQIIKEHILLSLLLWGPPGCGKTTLAYVM 110 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 ++ E+ +A ++++ I+ ++ +L +DE+HR K QD LP++ Sbjct: 111 SQTLRLPFEKFNASIQNKSQLQKLIQ-----KHPDESFVLLLDEIHRLTKPIQDYLLPYL 165 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E+G + +G TTENP + A+ SR +++ + EDIE VL +A E+ + Sbjct: 166 ENGHVLLVGTTTENPIMSIQPAIRSRCQIFEFYPIKAEDIELVLIKAAEEHL------NF 219 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 LP + AIA NGD R +LN L+ + M + S + E A + FD Sbjct: 220 DLPKKQAHAIANSGNGDVRVSLNILDTLNAMHPQNISMANI------EEFARNQHFAFDK 273 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 + YD +SA S+ GS DAALY+ A +I GD V RR +A+ DVG AD Sbjct: 274 DATKHYDYLSAFQDSIEGSDADAALYYLA-VILKSGDLESVVRRLKDLAALDVGLADSAR 332 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + I + +G +A A + LA AP+S++ A+ A DA D+ +P Sbjct: 333 VAQVITLANTALEIGLPRASTHLAMATILLAVAPRSDSAMQAYYQAAKDAEHPADHPMPK 392 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 +L++ K ++ E + D + A E Y P ++ YY P E K+ Sbjct: 393 YLQDYHYKGAGKLRGAGEMQNMFDLPHNIARQE-YLPKDLVGKHYYVPAQNKAEEKL 448 >UniRef50_D1J7Q3 ATPase, AAA family n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Q3_MYCHP Length = 404 Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 140/414 (33%), Positives = 208/414 (50%), Gaps = 25/414 (6%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA +RP+ L +I Q K + IE S I +G PGTGKTT++ ++A Sbjct: 5 LANLIRPKILEDFICPQE---QKKLFQKIIENNDYRSFIFYGKPGTGKTTISYILANALK 61 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + E +A ++ + + + + N+ IL +DE+HR NK +QD LP++E+ I Sbjct: 62 VNYEYFNA---AIENKEDLVHKLKLNK------ILIIDEIHRLNKDKQDILLPYLENDLI 112 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 T TTENP F+LN AL SR + + + +D+ L A KT G + L + Sbjct: 113 TIYATTTENPYFKLNPALRSRCSIIEITKPTIQDLSSCLKNACL-KTFG-----VDLNKD 166 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 +A NGD R ALN L+++ M D + E + +I D GD Sbjct: 167 IADYLALQANGDFRSALNNLDLI--MLIFKD---QEFSLEAIKKIIPSIQFSSDESGDNH 221 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 YD +SA HKS+RGS DAALYW II GD + RR L + EDVG A+P+ + Sbjct: 222 YDYLSAFHKSLRGSDIDAALYW-GFIIIKSGDFDGLFRRMLCASYEDVGMANPKLGSEVL 280 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 +A +CF R+G EG I QAI+ + +PKSN VY++ + ++VP+HL++A Sbjct: 281 SAIECFERIGMPEGYLPITQAILNICLSPKSNTVYSSSTLIKSIIDSGNIFEVPIHLKDA 340 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 K ++ G Y+Y HD N Y + Y P E+ + +G E KI + Sbjct: 341 HYKSAAKLKRGLNYKYPHDYKNNYIDQQ-YLPNELKDKIHIELNGQGYEQKIKQ 393 >UniRef50_B8LS10 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LS10_PICSI Length = 721 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 105/213 (49%), Positives = 139/213 (65%), Gaps = 5/213 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PL+ RMRP + + +GQ HLL L +E + S++ WGPPGTGKTTLA IA Sbjct: 206 PLSERMRPLLVDEVVGQDHLLGKNCILRSLLECDRVPSIVFWGPPGTGKTTLARAIANSV 265 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + +SAVTSG+KE+RE +E A++ + G+RT+ FVDEVHRFNK+QQDAFLP +EDG+ Sbjct: 266 SYRFSSVSAVTSGLKEVREVLEEAKRMKKMGQRTLFFVDEVHRFNKAQQDAFLPVVEDGS 325 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY-----GGQD 189 I FIGATTENPSFE+N+ALLSR RV L L E I ++L +A+ D +G G Sbjct: 326 IVFIGATTENPSFEVNNALLSRCRVLTLNKLQPEHIRKLLERAVSDSDKGLMVSLKGFSA 385 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + E ++ +GDAR ALN LE+ A A Sbjct: 386 VKVEVEAIEFLSCASDGDARVALNVLEIAASAA 418 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 79/169 (46%), Positives = 110/169 (65%), Gaps = 3/169 (1%) Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D G+ Y++ISALHKS+RGS PDAALYW AR++ G +PLY+ARR + ASEDVG AD Sbjct: 545 YDRTGEEHYNIISALHKSMRGSDPDAALYWLARMLEGGENPLYIARRLVRFASEDVGLAD 604 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ A+A + +G E +AQ + YL+ APKS AVY AA +E+ + Sbjct: 605 PLALPQAVACYQACHFLGMPECNVNLAQCVAYLSLAPKSVAVYQGIVAAQRMVKEKGQNE 664 Query: 368 -VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 VP+HLRNAPTKLMK++GYG+ Y Y +++ + Y PP +A ++ Sbjct: 665 PVPLHLRNAPTKLMKDIGYGKGYIYP--PSHSSPTRQEYLPPSLAGYKF 711 >UniRef50_B1AII3 ATPase, AAA family n=14 Tax=Ureaplasma RepID=B1AII3_UREP2 Length = 408 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 128/408 (31%), Positives = 201/408 (49%), Gaps = 20/408 (4%) Query: 22 PENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERI 81 P ++ +GQ++LL + R + + ++I +GPPG GK++LA+V+A+ Sbjct: 12 PHSIDDIVGQKYLLDEIGIIRRMVNHHQVFNLIFYGPPGVGKSSLAKVLAQDLKVPFAFF 71 Query: 82 SAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGAT 141 + V K++ + IE+A N I+ +DE+HR NK +QD LP IE I T Sbjct: 72 NPVVDSKKQLMQIIEQALDLNN----FIIIIDEIHRLNKDKQDILLPIIEANKIKLFATT 127 Query: 142 TENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIA 201 TENP F +N AL SR ++ LK L++ I + + + + V + + Sbjct: 128 TENPFFVINPALRSRCQLLSLKPLTSSQISE--------RIKTLINVEEVFEPQAFNLLI 179 Query: 202 ELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISA 261 NGD R +NTLE++ + + + + LL I E A + GD +DL SA Sbjct: 180 NKTNGDLRAVINTLEIIYLLYK-----EHKVDYVLLKRIMQESYALGSSDGDEIHDLKSA 234 Query: 262 LHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCF 321 HKS+RGS DAALY+ AR+I GD + RR ED+G A+P + Sbjct: 235 FHKSMRGSDCDAALYYLARLIII-GDFEAIYRRVSVCVHEDIGLANPNLCLRVDQGINSC 293 Query: 322 TRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMK 381 +G E + +A ++ + + KSN+VY A++ A DA Y +P H+R+A Sbjct: 294 RFLGYPENQVILANLVLQICLSNKSNSVYLAYQKAFEDAANGKQYSIPNHVRDAHYASAI 353 Query: 382 EMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 ++G Y+Y HD N Y + Y P E+ +YY P N E K+ + Sbjct: 354 KLGV-HGYKYPHDFKNNY-VNQQYLPRELTNKKYYVPQNNEQEFKLNQ 399 >UniRef50_Q2NJI8 ATPase, AAA family n=7 Tax=Mollicutes RepID=Q2NJI8_AYWBP Length = 414 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 126/407 (30%), Positives = 213/407 (52%), Gaps = 19/407 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLA-AGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA +RP + IGQ HL+ + R ++ + S+I +G PG GK++LA+V+A Sbjct: 4 KPLAFALRPSTITDIIGQSHLINDQNGIISRMLKNNYASSLIFYGVPGIGKSSLAQVLAN 63 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 D++ + + + + +E+ Q ++ IL ++E+HR NK +QD L ++E+ Sbjct: 64 ----DLQIKYDIFNAAIDKKSKLEKIIQQALNFKKFILIIEEIHRMNKDRQDILLQYLEN 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG-GQDIV 191 G + TTENP F +N ++ SR + L+ ++TE++ L + + +K QD + Sbjct: 120 GHLIMFACTTENPYFVINPSIRSRVNIIKLERITTEEMLTGLNKLIVNKKLPLNILQDAL 179 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 L I +L +GD R A+N LE+ + G+ + K + + F + Sbjct: 180 L------LICQLSSGDLRIAINMLELCLHLY----PGEEITKKIIKKISSSANLINFKD- 228 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 D ++L SAL KS+RGS DAAL+++AR++ A GD + RR L A ED+G A+P + Sbjct: 229 NDEHHNLKSALQKSIRGSDVDAALHYFARLL-ASGDHEALIRRMLITAYEDIGLANPMII 287 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 A D F ++G EG + AI+ + + KSN+ Y A A D + +++P H Sbjct: 288 IHVKTAIDAFRQIGLPEGRIPLGLAIIEMCLSEKSNSAYLASNKAYEDVLQGNVFNIPKH 347 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP 418 L++ ++G G +Y+Y H+ N Y + Y P EI + YY P Sbjct: 348 LQDTSYNSASKLGIGFDYKYPHNFPNNY-VNQQYLPQEIKELIYYIP 393 >UniRef50_C4LVU1 AAA family ATPase, putative n=2 Tax=Entamoeba RepID=C4LVU1_ENTHI Length = 429 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 123/373 (32%), Positives = 204/373 (54%), Gaps = 16/373 (4%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 NL +FS +TF LA R RP+ + +GQ L + + G + SMI +GPPG G Sbjct: 17 NLKTEFS-STFGTLAERRRPQKIEDVVGQ--LKVRDDIIHQVTVLGRVDSMIFFGPPGCG 73 Query: 63 KTTLAEVIARY---ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFN 119 KTT ++I R+ + +++ S T+ VK+ ++ I + + +TI+F+DE+H + Sbjct: 74 KTTFCKLIKRHFEKSFIELDGNSINTNIVKDFKKGIIK-KNKETTHSQTIIFIDEIHCIS 132 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 + Q+ + I++ TI IG TT+ PSF L+ LL RV +L+ L+ +++++ +A+ Sbjct: 133 STVQNFLIDLIKEKTICLIGTTTQVPSFCLSKELLLFMRVIVLERLNEVSVKEIIKRAIN 192 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 + Y ++ DE I E +GD R ALN LE + AE++ + +K + E Sbjct: 193 AEYSKY-----IVSDEVIDKIVESSDGDGRMALNNLEKLIQCAELEKVNEVSIK--FVHE 245 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + G+R+ +D +GD Y+LISA KS+RGS DA++YW R+I +G Y+ RR L IA Sbjct: 246 VIGKRALNYDKRGDEHYNLISAFQKSIRGSDEDASVYWLERMILSGEKLSYITRRMLRIA 305 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SED+G AD A V +G + + + + ++YLA A KSN + +L Sbjct: 306 SEDIGMADTSATTVISNVAYAVDVLGYPDCKCCLLEGVLYLARARKSN--FLDVLDSLGR 363 Query: 360 ARERPDYDVPVHL 372 + ++ Y VP+ + Sbjct: 364 SLKKQQYSVPLEV 376 >UniRef50_C7M3A0 AAA ATPase central domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M3A0_ACIFD Length = 370 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 148/375 (39%), Positives = 206/375 (54%), Gaps = 23/375 (6%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPL---PRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 +PLA +RP +LA+ +GQ H A + L PR I ++I+ GPPG GKTT+A ++ Sbjct: 12 RPLAEELRPTSLAEVLGQDHARARLEALATAPRTI------AVIMTGPPGVGKTTIASLL 65 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 AR + + A +GV+++REA A + G T+ FVDEVHRF ++Q D L I Sbjct: 66 ARARGEHLVELHATDTGVRDLREARAEAARRARHGDGTLWFVDEVHRFGRTQLDLLLAPI 125 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G I+FIGATTENP+ L+ ALLSR V L++L E + +A+ ++ + G + Sbjct: 126 ERGEISFIGATTENPAVTLSPALLSRCDVVRLRAL-----EPPVLRAVAERALAHLG--L 178 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + D + GDAR L LE A A +R L ELL I+ + D+ Sbjct: 179 IADDAAIAWLVAAARGDARALLRILERAAPAAA-----QRPLTVELLERISEIAALGLDD 233 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 Y+L SAL KS+R S P A+ W A + AG DP ++ARR + ASEDVG ADP A Sbjct: 234 ST--HYELASALIKSMRQSRPTEAIRWLAAALAAGEDPRFIARRLVIFASEDVGLADPEA 291 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A AA D R+G E +A ++YLA APKS Y A +AALA+A +P VP Sbjct: 292 LVLAAAAADTVERIGMPEARITLAHVVLYLARAPKSREAYDAIEAALAEASTKPRPIVPE 351 Query: 371 HLRNAPTKLMKEMGY 385 LR T + + G Sbjct: 352 ELRGQITGIERRRGI 366 >UniRef50_A3ERK9 Probable ATPase, AAA family n=2 Tax=Leptospirillum sp. Group II RepID=A3ERK9_9BACT Length = 444 Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 126/419 (30%), Positives = 217/419 (51%), Gaps = 24/419 (5%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 F + +PL++ + P+ +++GQ HL+ L R I SM++ GPPG GK+ Sbjct: 5 FEPASQKPLSSLLFPDRPEEFLGQPHLMGERGILRRLIAVRSFRSMVIHGPPGCGKSAFV 64 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFL 127 ++ + E + A S E+++AI+R R +G+ +L ++E+ RF ++QQD + Sbjct: 65 HLLQKVLPFHFEVVRAGESSGGELKKAIDRGVSYRQSGQDCLLVIEEIDRFTRTQQDVLV 124 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLT---QAMEDKTRG 184 P +E G + +G + +NP L L SR ++ + LS ED+ +L Q +E + R Sbjct: 125 PALERGDLLLLGLSFDNPLRALLPPLASRLLLFSFQPLSPEDLLTLLERGRQFLEKRDR- 183 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLK---PELLTEIA 241 + + E + GD R+ L E + ++ D +R ++ PE+ A Sbjct: 184 ---SPVSISPEAASVLVRRSGGDGRKLLLLFEALV-ISRKDHGERREVQIGLPEVHGMEA 239 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 G +D ++ YDLISA KS+R PD+A+++ AR+I +G DP++++RR + +ASE Sbjct: 240 GSGGIFYDR--EQHYDLISAFIKSIRNHDPDSAIHYLARMIESGEDPVFISRRLVILASE 297 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG A+P A+ VA++ + +G EG +A+ +YLA +PKSN+ Y A A+ + R Sbjct: 298 DVGLANPHALTVAVSCLEAVRSIGMPEGRIVLAETSLYLALSPKSNSAYRAIDRAIREVR 357 Query: 362 ERPDYDVPVHLRN-APTKLMKEMGYGQE---YRYAHDEANAYA-------AGEVYFPPE 409 E VP RN +P+ +++ + + Y Y + N + VY PPE Sbjct: 358 EGFLPPVPFFFRNVSPSSVIQSGAFPDKRDPYLYPPEMPNGVSPQSGLPEGHTVYSPPE 416 >UniRef50_A0RRQ8 ATPase, AAA family n=3 Tax=Campylobacter RepID=A0RRQ8_CAMFF Length = 397 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 130/424 (30%), Positives = 209/424 (49%), Gaps = 38/424 (8%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 L+ RP N+ +GQ+ ++ + + I++ + + +G G GKTT+A++IA+ N Sbjct: 3 LSNDFRPNNINDMVGQKDIV---ELFSKFIKSKKIPHSLFFGATGCGKTTMAKIIAKQMN 59 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + + ++IR+ I + + ++F+DE HR +K+QQ+ L +E G Sbjct: 60 YEFFELDGANLKSEDIRKIISKFETTL---YKPLIFIDEFHRLSKTQQETLLIPMEKGKC 116 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 +GATTENP F ++S + SR ++ K LS +++ +LT+ Q+++ + Sbjct: 117 IVMGATTENPKFVVSSGIRSRMMIFEFKPLSHDELTILLTKV----------QNVIKFEI 166 Query: 196 TRRAIAELVN---GDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 T A L+N GDAR LN LE S + + +L + R + + Sbjct: 167 TNEAKDYLINSSGGDARSLLNLLEFAL-------SADKSIGLNILKTLRSHRVSEGVSNS 219 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D Y+L SAL KS+RGS DA++Y+ AR+I G +P ++ARR + ASED+GNA+P A+ Sbjct: 220 DTHYELTSALIKSLRGSDIDASIYYLARLIQGGEEPAFLARRMVIFASEDIGNANPNALN 279 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A +++G E +AQ VYLA +PKSN+ Y A A+ RP VP +L Sbjct: 280 LATNVMLAVSKIGYPEARIILAQCAVYLASSPKSNSSYKAINDAIEFVENRPALPVPKYL 339 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 N EY Y HD G V Q ++Y G E + E + Sbjct: 340 INTDKA-------KSEYLYPHD-----FGGWVEQKYMSTQVKFYKSNAIGFEKTLDEWIT 387 Query: 433 WLAE 436 L E Sbjct: 388 KLKE 391 >UniRef50_B6KHT5 ATPase, AAA family domain containing protein n=4 Tax=Eukaryota RepID=B6KHT5_TOXGO Length = 1101 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/219 (46%), Positives = 141/219 (64%), Gaps = 19/219 (8%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAI-EAGHLHSMILWGPPGTGKTTLAE 68 D PLA R+RP +L +Y+GQ+ + G+ R + EAGHL S+ILWGPPG GKTT+A Sbjct: 599 DAVSVPLAERLRPASLEEYVGQRGCIQGGRGSIRELLEAGHLPSLILWGPPGCGKTTIAL 658 Query: 69 VIARYANAD----------VERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHR 117 + R +++SAVT GV ++R+ ++ A R ++T+LF+DE+HR Sbjct: 659 LAGRSVGKKNSALSLPPPVFKKMSAVTCGVNDVRKVVQEALTLRATTKQKTVLFLDEIHR 718 Query: 118 FNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 FNK+QQDA LPH+E GTIT IGATTENPSFE+N ALLSR RV L+ L+ ED+ +L +A Sbjct: 719 FNKAQQDALLPHVETGTITLIGATTENPSFEVNRALLSRCRVCKLEPLTEEDLTTILQRA 778 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 ++ +++ + + R I L +GDARRALN LE Sbjct: 779 AKE-------ENVTITEAAVRVICRLADGDARRALNMLE 810 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 71/146 (48%), Positives = 97/146 (66%) Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D D +YDLISALHKSVRGS AA+Y+ R++ AG DPL +ARR + +ASED+G AD Sbjct: 912 YDKNRDSYYDLISALHKSVRGSDEHAAVYYLTRMLEAGEDPLKIARRIVRMASEDIGLAD 971 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ + +AA+ G E A+ A++YL PKSNAV A+ A + E PD Sbjct: 972 PAALSLCVAAYQASHFTGMPECSTALTMAVIYLCKCPKSNAVDLAYSKAKSLVLEYPDAP 1031 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAH 393 VP+H+RNAPTKLM ++GYG+ Y + + Sbjct: 1032 VPLHIRNAPTKLMSQLGYGRGYVHTN 1057 >UniRef50_A7ZAZ1 ATPase, AAA family protein n=45 Tax=Epsilonproteobacteria RepID=A7ZAZ1_CAMC1 Length = 394 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 122/380 (32%), Positives = 190/380 (50%), Gaps = 29/380 (7%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA RP+NL + GQ+ A + I + I +GP G GKT+ A +A AN Sbjct: 4 LALMFRPKNLDEICGQK---AVKTAFLKFIATSKIPHSIFYGPAGCGKTSFARAVASGAN 60 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 D + + R+ + + NA + + F+DE+HR +K+QQ+A L +E+ Sbjct: 61 YDFYEFDGGNLKIDDFRKIL---KNYENALNKPLFFIDEIHRLSKTQQEALLIPMENYKA 117 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 IGA+TENP F L+S + SR+ ++ + LS+ D E++L + E + + ++ Sbjct: 118 LVIGASTENPFFTLSSGIRSRSMLFEFRPLSSSDFEELLAKIKEQIS-------FSIDED 170 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAE-VDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 + + + GDAR LN LE + E V + L+ L E A E D Sbjct: 171 AKEYLFKSSGGDARAMLNLLEFAVTLDENVSIENLKTLRQNALKEGAKE--------DDT 222 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 Y+L SA KS+RGS +A +Y+ AR+I +G ++ARR ASED+GNA+P A+ +A Sbjct: 223 HYELASAFIKSLRGSDENAVIYYLARLIDSGESADFIARRMAIFASEDIGNANPNALNLA 282 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 + +G E +AQ VYLA +PKSN+ Y A AAL + +P +L+N Sbjct: 283 ASTLSVVKEIGFPEARIILAQCAVYLASSPKSNSSYNAINAALRYVQTEEILKIPPYLKN 342 Query: 375 APTKLMKEMGYGQEYRYAHD 394 + ++Y Y HD Sbjct: 343 HTKE-------SKDYLYPHD 355 >UniRef50_Q7NAV9 Predicted ATP/GTPase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAV9_MYCGA Length = 413 Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 117/398 (29%), Positives = 208/398 (52%), Gaps = 20/398 (5%) Query: 21 RPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVER 80 +PE++ IGQ+HLL L R I+ +S+++ G PG GKTTL ++ N Sbjct: 13 QPESVEDIIGQKHLLHEYGILRRMIDLRKPYSLLVTGEPGIGKTTLCNILISEMNLPSFS 72 Query: 81 ISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGA 140 ++ + ++E+++ I +A++ + ++ +DE+HR ++ +QD + ++ + G Sbjct: 73 FNSASDSLQELKQFISKAKE----LNQCVIIIDEIHRLHRDKQDLLIKGLDAKSFILFGI 128 Query: 141 TTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV-LPDETRRA 199 TTENP F +N A+ R+RV+ ++ ++ IE E + ++IV + D+ Sbjct: 129 TTENPYFTINPAI--RSRVHTIELVNPTSIE-----LFEGYKKIVQQKNIVTISDDILYK 181 Query: 200 IAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLI 259 IA +VNGD R+ +N +E++ D K V E + + + + + GD F+DL Sbjct: 182 IANMVNGDLRKGINIIELL------DIYYKNVEITEEILKNVIDNNVTLASYGDTFHDLK 235 Query: 260 SALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 SAL KS+RGS PDAA+Y+ A++I A D + ++RR +A A ED+G A+P A Sbjct: 236 SALQKSIRGSDPDAAVYYLAQLI-ATKDLITISRRLIACAYEDIGLANPDLCSRVYLATQ 294 Query: 320 CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKL 379 G E + ++ ++ +A + KS++ Y A AL + +VP H++ P L Sbjct: 295 AAKEAGFPEANQILSSIVIEMALSEKSSSAYEAISDALVEVANGNIQNVPWHIKKNPINL 354 Query: 380 MKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 + Q+Y+ H+ N + + + Y P EI +YY Sbjct: 355 SSTLNNMQKYKNPHNYDNHWVSQD-YLPREIRDKKYYI 391 >UniRef50_Q043K3 Helicase subunit of the Holliday junction resolvase related ATPase n=11 Tax=Lactobacillus RepID=Q043K3_LACGA Length = 429 Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 132/423 (31%), Positives = 217/423 (51%), Gaps = 29/423 (6%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +RP++L+Q++GQ+ L+ G+PL + I+ S++LWGPPGTGKT+LA++IAR Sbjct: 8 KPLADLIRPKDLSQFVGQKDLIEEGRPLYQIIKKHVPISLLLWGPPGTGKTSLAQIIARE 67 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + + +A ++ + I N + +L +DE+HR + QD LP++E+G Sbjct: 68 FDYPLATFNASIDNKAKLTQII-----NTYPYQSFVLLIDEIHRMTTTLQDFLLPYLENG 122 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATTENP + A+ SR +++ K+LS EDIEQVL +A+++ + +D + Sbjct: 123 RILLIGATTENPIMSIVPAVRSRCQIFEFKALSDEDIEQVLIRALKEV---FHFKDENID 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + + IA +GD R ALN LE + + E L E + + + +D K Sbjct: 180 RKAVKIIAISADGDLRVALNLLETIHAVNE-------DLSVEEVKQFVKGQHFAYDRKAT 232 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP-RAMQ 312 + YD ++A S+ GS DAALY+ A ++ GD V RR I +G A+P +A Q Sbjct: 233 KHYDYLAAYSDSIAGSDTDAALYYLA-VLLKNGDLASVVRRLREIPYTYIGLANPEQATQ 291 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + IAA ++G + + + A + + +PKS ++ D + +P L Sbjct: 292 IVIAANQA-EKIGMPKAKYPLMFATMLMCLSPKSGVFDEIWQKLDEDTDHPSKHPMPRGL 350 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYA-----AGEVYFPPEIAQTRYYFPTNRGLEGKI 427 R+ K +E+ G N +A A + Y P + RYYF + E K Sbjct: 351 RDMHYKHSEEITGGGLID------NPFAQPFQIAKQNYMPKGLEGKRYYFAKDNASEKKF 404 Query: 428 GEK 430 ++ Sbjct: 405 EQQ 407 >UniRef50_C4LTC0 AAA family ATPase, putative n=2 Tax=Entamoeba RepID=C4LTC0_ENTHI Length = 611 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 95/224 (42%), Positives = 141/224 (62%), Gaps = 5/224 (2%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + PLA + RP+NL IGQ+ +LA G P I+ + S IL+GPPG GKTT+A +I Sbjct: 42 YIPLAEKQRPKNLEDIIGQEDILAIGTPFNTMIKNDKIQSTILYGPPGCGKTTIAGIIKN 101 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + + +SA +S ++ ++ I A+ + G TILF+DE+H N+ QQD FLP IE Sbjct: 102 NSKSTFISMSAASSKKEDFKKVINDAKHRKRMGINTILFLDEIHSLNRLQQDTFLPAIES 161 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GTI IGATTENPSFELN+AL+SR ++ LK L+ ED+ +++ +A++++ Y I + Sbjct: 162 GTIILIGATTENPSFELNNALMSRCQLVTLKKLTDEDVVKIMRKAIDEE---YCNSKIDI 218 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPEL 236 +E IA + +GDAR ALNTLE + + ++VLK E+ Sbjct: 219 DNEGLHFIAAISDGDARSALNTLEKV--FVHFNLMSEKVLKNEI 260 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 2/168 (1%) Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 N+G+ + +++A KS+ S +A +YW R+I G +P Y+ RR + I+SED+G AD Sbjct: 393 NQGEDHFKVLTAFQKSITHSDEEATIYWLQRLIEMGENPKYIVRRMIKISSEDIGLADVE 452 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ +A+ + + +G E + A+ + +YLA APKS AV+ K ++ VP Sbjct: 453 ALNIAVKTFQIVSSLGYPEADTALYECALYLARAPKSCAVFETMKYTEEIIKQTGSLPVP 512 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 +H+RNAPT LM++MGY Y+Y + + Y P ++ T+ F Sbjct: 513 LHIRNAPTSLMEKMGYSVGYKYPPNYNEVL--DQTYLPEKLINTKLVF 558 >UniRef50_B2GIA8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B2GIA8_KOCRD Length = 556 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 101/214 (47%), Positives = 139/214 (64%), Gaps = 9/214 (4%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-----HSMILWGPPGTGKTTLAEV 69 PLA RMRP L + +GQ+HLL G PL RA+ G S+ILWGPPGTGKTT+A+V Sbjct: 36 PLAVRMRPRTLDEVVGQKHLLRPGSPL-RALVNGSSGPAAPSSVILWGPPGTGKTTIAQV 94 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLP 128 IAR +SA+T+GVK++R ++ A R+ GR T+LF+DE+HRF K+QQDA LP Sbjct: 95 IARGHGTTFVELSALTAGVKDVRRVMDEALTARDLHGRTTVLFLDEIHRFTKAQQDALLP 154 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 +E+G + + ATTENPSF + S LLSR+ + L+ L DI ++L +A+ D RG G Sbjct: 155 GVENGWVILVAATTENPSFSVISPLLSRSLMLTLQPLERRDIGELLDRAVTDP-RGLDGA 213 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + L E R + ++ GDAR+AL +LE A +A Sbjct: 214 -VDLAPEAREHLLDVAGGDARKALTSLEAAAGVA 246 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/228 (42%), Positives = 131/228 (57%), Gaps = 2/228 (0%) Query: 216 EMMADMAEVDDSGKR-VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAA 274 E + AE G R V+ E E + R+D +GD+ YD++SA KS+RGS DAA Sbjct: 327 EQPSGPAEAQGPGTRPVVTLEHAEEAVNRAAVRYDRQGDQHYDVVSAFIKSLRGSDVDAA 386 Query: 275 LYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA 334 +++ AR+I AG DP ++ARR + ASED+G ADP A+Q A+AA +G EG +A Sbjct: 387 MHYLARMIEAGEDPRFIARRLIISASEDIGMADPTALQTAVAAAQAVQLIGMPEGRIPLA 446 Query: 335 QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHD 394 QA+ +LA APKSNA Y A AA+AD R VP HLR+A ++G+G YRYAHD Sbjct: 447 QAVAHLATAPKSNASYLAVDAAIADVRAGRAGPVPPHLRDAHYPGAADLGHGHGYRYAHD 506 Query: 395 EANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSP 442 NA A + Y P E+ YY PT G E ++ +L L + P Sbjct: 507 APNAVAT-QQYPPDELVGRDYYTPTPYGHEKQVSHRLEILRHMVRGGP 553 >UniRef50_C2GHX2 Crossover junction endodeoxyribonuclease n=4 Tax=Actinomycetales RepID=C2GHX2_9CORY Length = 574 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 105/220 (47%), Positives = 146/220 (66%), Gaps = 2/220 (0%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 F PLA RMRP +L + +GQQHLLA GKPL R IE S+IL+GPPGTGKTT+A Sbjct: 21 FHPGGHAPLAVRMRPRSLDEVVGQQHLLAPGKPLRRLIEGDGEASVILYGPPGTGKTTIA 80 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFL 127 +I+ +SA+ SGVKE+R I+ AR+ G RT+LF+DEVHRF+K+QQDA L Sbjct: 81 SLISVATGNRFVGLSALDSGVKEVRAVIDTARKKLIEGTRTVLFIDEVHRFSKTQQDALL 140 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 +E+ + + ATTENPSF +N+ LLSR+ + L+SL ED++ V+ +A+ED+ RG+GG Sbjct: 141 AAVENRIVLLVAATTENPSFAVNAPLLSRSLLLQLESLGPEDLKTVVLRALEDE-RGFGG 199 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS 227 + + + D+ + L GDARRAL +E A+ A D+ Sbjct: 200 E-VGITDDALDQLVTLAGGDARRALTYVEAAAEGARSIDA 238 Score = 148 bits (373), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 86/201 (42%), Positives = 116/201 (57%), Gaps = 1/201 (0%) Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 S R++ E L E + R+D GD+ YD+ISA KSVRGS DAAL++ AR+I G Sbjct: 360 SPTRIITLETLEETINKAVVRYDRDGDQHYDIISAFIKSVRGSDVDAALHYLARMIEGGE 419 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 DP ++ARR + +ASED+G ADP A+ A+AA +G EG ++AQA V+LA APKS Sbjct: 420 DPRFIARRLIILASEDIGMADPTALSTAVAAAQAVALIGMPEGRLSLAQATVHLALAPKS 479 Query: 347 NAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYF 406 N++ TA ALAD R+ VP HLR+ + K +G Y Y HD+ + Y Sbjct: 480 NSIITAIDNALADVRKGKSGPVPRHLRDGHYEGAKRVGAAIGYTYPHDDPRGIVT-QRYM 538 Query: 407 PPEIAQTRYYFPTNRGLEGKI 427 P + YY PT+ G E I Sbjct: 539 PETLDGATYYQPTSHGREANI 559 >UniRef50_A9ULW2 Putative uncharacterized protein n=1 Tax=Xenopus laevis RepID=A9ULW2_XENLA Length = 339 Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 88/170 (51%), Positives = 120/170 (70%), Gaps = 4/170 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +MRP L Y+GQ +L L ++A + S+ILWGPPG GKTTLA +IA+ Sbjct: 148 KPLADKMRPTTLNNYMGQNKVLGENTMLRNLLQANDIPSIILWGPPGCGKTTLAHIIAKN 207 Query: 74 ANADVER---ISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 A R +SA ++ ++RE I++A+ + R R+TILFVDE+HRFNK QQD FLPH Sbjct: 208 AQKSSSRFVTLSATSASTSDVREFIKQAQNEQRLFKRKTILFVDEIHRFNKMQQDTFLPH 267 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 +E GTIT IGATTENPSF++N+ALLSR RV +L+ LS E +E +L +A++ Sbjct: 268 VECGTITLIGATTENPSFQVNTALLSRCRVIVLEKLSVEAMETILMRAVD 317 >UniRef50_D1VIN0 AAA ATPase central domain protein n=1 Tax=Frankia sp. EuI1c RepID=D1VIN0_9ACTO Length = 622 Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/226 (42%), Positives = 133/226 (58%), Gaps = 31/226 (13%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANA 76 A R+RP L + +GQ+HLL G PL R +E G S++LWGPPGTGKTTLA +++R Sbjct: 61 ADRLRPRGLDELVGQRHLLGPGSPLRRLVEGGGTTSVVLWGPPGTGKTTLAHIVSRATGR 120 Query: 77 DVERISAVTSGVKEIREAIERARQN-------------RNAG----------------RR 107 +SAVT+GVK++R I+ AR R G R Sbjct: 121 RFRELSAVTAGVKDVRAVIDEARDALSSSRSNQSRRMVREPGLFSDAAQAPGGEVPVDLR 180 Query: 108 TILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLST 167 T+LF+DEVHRF ++QQDA LP +E G IT + ATTENPSF + + LLSR+ ++ L L+ Sbjct: 181 TVLFIDEVHRFTRTQQDALLPAVERGWITLVAATTENPSFSVVAPLLSRSLLFTLTPLTD 240 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 +DI ++ +A+ D RGYGG+ + + D+ + L GDARRAL Sbjct: 241 DDIRALVRRALVDP-RGYGGR-VRIADDALEHLVRLAGGDARRALT 284 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/188 (43%), Positives = 113/188 (60%), Gaps = 1/188 (0%) Query: 236 LLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC 295 LL + + R+D GD+ YD++SA KS+RG DA+L++ AR+I AG DP ++ARR Sbjct: 400 LLEQSINRAAVRYDRDGDQHYDVVSAFIKSMRGGDADASLHYLARMIEAGEDPRFIARRM 459 Query: 296 LAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKA 355 + +ASED+G ADP A+ VA++A +G E A+AQA+++LA APKSNAV A A Sbjct: 460 IILASEDIGMADPGALGVAVSAAQALELIGLPEARLALAQAVIHLALAPKSNAVIRAMDA 519 Query: 356 ALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 A AD R VP HLR+A + + +G+G YRY HD A + Y P E+ Y Sbjct: 520 ATADVRAGKAGPVPRHLRDAHYQGARRLGHGDGYRYPHDYPEGVAR-QQYPPDELVGVDY 578 Query: 416 YFPTNRGL 423 Y P + G Sbjct: 579 YRPGDLGF 586 >UniRef50_A5IXK5 ATPase, AAA family n=2 Tax=Mycoplasma RepID=A5IXK5_MYCAP Length = 404 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 131/408 (32%), Positives = 190/408 (46%), Gaps = 34/408 (8%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA +RP+ L IGQ+ ++ K + R S I +G GTGKT+ A +A Sbjct: 4 LANELRPKTLDDIIGQKSVVELLKKVARD---KIYSSFIFFGESGTGKTSAAVALANDLG 60 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + +A + E+ + + +L +DE+HR NK +QD L ++E I Sbjct: 61 LKYDYFNASVNSKAELIKML---------ADNDVLIIDEIHRLNKDKQDILLSYLEFDKI 111 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 TTENP F +N AL SR ++ LS EQ + + ++ + Y D + + Sbjct: 112 IIYATTTENPYFRVNPALRSRMQILQFTKLS----EQEMFEGIKHNLKKYF-PDYQMDES 166 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAE-----VDDSGKRVLKPELLTEIAGERSARFDN 250 T + +L NGD R LN L+++ M++ +DD K V P + SA ++N Sbjct: 167 TIKVFVKLSNGDYRSCLNNLQILTLMSKNKQISLDDIKKFV--PNISFYSDENSSAHYNN 224 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 +SA HKS+RGS DAALY Y II GD + RR +A + EDVG ADP Sbjct: 225 --------LSAFHKSLRGSDVDAALY-YGAIIVKSGDLQGLFRRLIACSYEDVGLADPNL 275 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 A DC +G E I AI+ +A A KSN+VY A + YDVP Sbjct: 276 QIRVKNAIDCAELLGLPEARLPIFYAIISVALASKSNSVYEAISNVEGYINQGNIYDVPK 335 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP 418 LR+ ++G Y+Y HD N E Y P E +++FP Sbjct: 336 FLRDGHYASAVKLGDSIGYKYPHDFPNHIVKQE-YLPKEAKGNQFFFP 382 >UniRef50_Q6KHC7 ATPase n=3 Tax=Mycoplasma RepID=Q6KHC7_MYCMO Length = 372 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 120/381 (31%), Positives = 183/381 (48%), Gaps = 28/381 (7%) Query: 50 LHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTI 109 + S I +G G GKTT A VIA+ E + +E +E+ N+ I Sbjct: 1 MSSFIFYGESGIGKTTAATVIAK---EKQESYDVFNPTIHSKKELLEKLAINK------I 51 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTED 169 L +DE+HR NK +Q+ L ++ED I TTENP F++ +L SR ++ LS + Sbjct: 52 LIIDELHRLNKDKQEILLSYLEDDKIILYATTTENPYFKIIPSLRSRLKILRFNKLSETE 111 Query: 170 IEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM---AEVDD 226 I Q L +E Y + I + D+ +I + GD R A+N L+++ + VD Sbjct: 112 IFQGLKNIIE----KYKLK-IKINDDLLLSIVKFSAGDFRNAINNLDLIETIYPNTNVDF 166 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 + + P + + D D+ YD +SA HKS+RGS PDAALY Y ++ G Sbjct: 167 ESIKKIFPSM--------NFYTDKDADKHYDTLSAFHKSLRGSDPDAALY-YGMLLAKAG 217 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 D + RR + +A ED+ A+P A AA + RVG E +A+ I+ +A +PKS Sbjct: 218 DIDALLRRLIMVAYEDIALANPNASIKVDAAINAIERVGFPEANTILAKIIIEIALSPKS 277 Query: 347 NAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYF 406 N+ Y + L YD+P HL++ K + +Y Y HD N Y + Y Sbjct: 278 NSTYVSMNKILDKINNGNIYDIPDHLKDTHYKNSAKFN-RPKYLYPHDFENNY-VNQNYL 335 Query: 407 PPEIAQTRYYFPTNRGLEGKI 427 P E+ + ++ N E KI Sbjct: 336 PIELEKNHFFEFANNQNEQKI 356 >UniRef50_A8BYS0 ATPase, AAA family n=2 Tax=Giardia intestinalis RepID=A8BYS0_GIALA Length = 509 Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 123/393 (31%), Positives = 188/393 (47%), Gaps = 23/393 (5%) Query: 16 LAARMRPENLAQYIGQQHLLA-AGKPLPRAIEAGH----LHSMILWGPPGTGKTTLAEVI 70 L+ R+RP + + IG H+L+ + R E L S+I+ GPPGTGKT+ A + Sbjct: 97 LSMRLRPTTIDEIIGNHHILSLTDGVISRIYEQSRTTHVLQSIIITGPPGTGKTSFARLY 156 Query: 71 ARYANADVERI-----SAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDA 125 A+ + I A + + ++ E I R N R LFVDE HR K+QQD Sbjct: 157 AKSFDPSYRLIEFKPGQATVAELNKVTERIYTDRANSLTSARVCLFVDEAHRCTKAQQDR 216 Query: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ---AMEDKT 182 L +E+G +T I ATT +P + L SR + +L+++DI Q+ + +M DK Sbjct: 217 LLSAVEEGVLTLILATTSSPYTAIIEGLRSRCFLLSFNALTSKDILQICVRGLNSMLDKL 276 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 DI + I GD R+AL+ LE+ + + G +L L G Sbjct: 277 DTSVPLDICVEPSAIAKIVVAARGDGRKALSLLELSVTGGRITEQGVALL---LSGGAHG 333 Query: 243 ERSARFD-NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 + N+ Y+ +S + K++R S P A+++ A ++ DPLY+ARR + ASE Sbjct: 334 DAIMHCTLNQEQVKYEGVSGMIKAIRASDPQGAIFYLAFLLRTAVDPLYIARRLIISASE 393 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 D+G AD +A+ VA++ + +G E A+AQ +YL+ APKSN+ TA A A Sbjct: 394 DIGLADSQALSVAVSCYRATEVIGLPEAHYALAQTALYLSLAPKSNSAGTALNNAFAAID 453 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHD 394 D P + K G Y Y H+ Sbjct: 454 SATPTDC------LPPEGYKSASAGANYVYPHN 480 >UniRef50_B7PTW3 Werner helicase interacting protein, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7PTW3_IXOSC Length = 400 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 122/378 (32%), Positives = 188/378 (49%), Gaps = 30/378 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA MRP L ++GQ L L + I + + SMILWGPPG GKTTLA +I++ Sbjct: 1 PLAELMRPSQLEAFVGQDGTLGEKSMLRKLIASNSVPSMILWGPPGCGKTTLAHIISQKC 60 Query: 75 NADVE----RISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPH 129 E +SA +SGVK++++ +ERAR + R R+T+LF+DE+HRFNK QQ L + Sbjct: 61 KESSEAHFVTLSATSSGVKDVKDTLERARNDQRMFKRKTVLFIDEIHRFNKLQQLVGLCN 120 Query: 130 IEDGTITFIGATTENPS-FELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG-- 186 ++ + T + P L A+ R + L ++ + Q+ + + + Sbjct: 121 RASPIVSLL--TNDRPGVLTLKQAM--RRKSGLAQAHAGSVTNQLDSLHAFYSCKSFSPV 176 Query: 187 ---------GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELL 237 + +++ +E + + +GDAR ALN L+ + A L + Sbjct: 177 QYCFPVHLFSRPVLMEEEALDYLTGMCDGDARTALNALQTAVE-AHRSSGQDGCLTKAHV 235 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E + +D GD+ Y+ ISA KS+RGS +AALY+ A ++T G DP ++ARR + Sbjct: 236 KEGLHKTHFLYDRAGDQHYNTISAFIKSMRGSDQNAALYYLACMLTGGEDPRFIARRLVI 295 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASED+G R + C+ V + +A Y A APKS Y A+ A Sbjct: 296 FASEDIGTHSLRVTNLL-----CWFHV--LSLQIILAHCTTYCARAPKSRESYNAYAHAE 348 Query: 358 ADARERPDY-DVPVHLRN 374 +E+ VP+HLRN Sbjct: 349 KAVQEQERLPPVPLHLRN 366 >UniRef50_Q6CD04 YALI0C05038p n=2 Tax=cellular organisms RepID=Q6CD04_YARLI Length = 626 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 130/211 (61%), Gaps = 5/211 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PL RP+ L GQ+ L+A L R + G + S+I WGPPG GKTTLA ++A+ + Sbjct: 124 PLPELCRPQTLDDISGQKELMAV---LRRFVAYGRIPSIIFWGPPGVGKTTLARILAKTS 180 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQDAFLPHIEDG 133 +SA + V ++++ I++A +R TILF+DE+HRF+K+QQD LP +E G Sbjct: 181 GNRFVELSATQNNVADVKKVIDQANNEWKLLKRGTILFIDELHRFSKAQQDVLLPAVEKG 240 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 IT IGATTENPSF L AL SR RV LK LS +DI++V+ +++ K +++LP Sbjct: 241 DITLIGATTENPSFRLVGALTSRCRVLTLKKLSMKDIKEVVERSLV-KYNDTAEHEVILP 299 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEV 224 E IA + +GD R ALN LE++ + ++ Sbjct: 300 TEVIDYIAGIADGDVRSALNILELVVSVCDI 330 Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 74/147 (50%), Positives = 99/147 (67%), Gaps = 3/147 (2%) Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D GD YD ISA HKS+RGS PDA L++ +++ +G DPLY+ARR + IASED+G AD Sbjct: 424 YDKNGDNHYDAISAFHKSIRGSDPDATLFYLGKMLKSGEDPLYIARRMVRIASEDIGLAD 483 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAF---KAALADARERP 364 + + AA+ +VG EG+ +A A V LA A KS VY A+ K AL+D Sbjct: 484 DSLLPLCTAAYTGIQQVGMPEGDCILAHAAVKLALADKSVKVYKAWGMVKEALSDEHGLL 543 Query: 365 DYDVPVHLRNAPTKLMKEMGYGQEYRY 391 ++P+HLRNAPTKLMKE+GYG+EY+Y Sbjct: 544 AAEIPIHLRNAPTKLMKELGYGKEYKY 570 >UniRef50_C9SCJ0 ATPase WRNIP1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SCJ0_VERA1 Length = 458 Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 108/258 (41%), Positives = 147/258 (56%), Gaps = 15/258 (5%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP+ L GQ L+ L IE + SMILWG GTGKTT+A IA A Sbjct: 160 PLAERMRPQALDDVFGQD-LVGPHGVLRSLIETDRVPSMILWGGSGTGKTTIARCIAHRA 218 Query: 75 NADVERISAVTSGVKEIREA-IERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + ++A ++GV E+++ +E A GR+TI+F DE+HRF K+QQD FL +E G Sbjct: 219 GSRFIELNATSTGVAEVKKMFLEAANDLALTGRKTIIFCDEIHRFTKAQQDVFLKPVEAG 278 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TIT +GATTENPSF + +ALLSR R + L+ LS E+I +L +A+ + GG +L Sbjct: 279 TITLVGATTENPSFRVGAALLSRCRTFTLQKLSAENIAAILRRAVAAECP--GGPPPLLS 336 Query: 194 DETR-----RAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARF 248 D +A +GDAR ALN LE+ +A D+ LK L + + Sbjct: 337 DGANADHLLTYLAAFADGDARTALNLLELALSLAARPDTTMDDLKASLTKTLV------Y 390 Query: 249 DNKGDRFYDLISALHKSV 266 D GD+ YD ISA HK++ Sbjct: 391 DRAGDQHYDTISAFHKAM 408 >UniRef50_Q8EWR1 Predicted ATPase n=1 Tax=Mycoplasma penetrans RepID=Q8EWR1_MYCPE Length = 409 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 106/375 (28%), Positives = 191/375 (50%), Gaps = 21/375 (5%) Query: 45 IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA 104 IE L S++ +G PG GK+ + I + N + ++ T+ ++ E +E A ++ Sbjct: 34 IENNDLFSILFFGNPGVGKSASIQFILKKLNKNFYYFNSTTNNKNDLLEILELATEDN-- 91 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKS 164 + I+ ++E+HR NK +QD L ++E I + TTENP F++N A+ SR +Y +++ Sbjct: 92 --KPIIIIEEIHRLNKDKQDLLLMYLEKDMIIVLATTTENPFFKVNPAIRSRLLLYRIEN 149 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +++ +++ + + +E+K + L ++ AI E+ D R+ L+++ + Sbjct: 150 INSAVLKEEVIKYLENKK-------VKLSNKVVEAIVEISKSDFRQIFFYLKIVLKYYQ- 201 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + S VLK E+ ++ D + YDL+SA HKS+RGS P+AA+Y+ A+++ + Sbjct: 202 NKSDDIVLK-----ELGKITNSLIDRRATNHYDLLSAFHKSIRGSDPNAAVYYLAQLLES 256 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAP 344 GD + V RR A+ ED+G A+ AA + +G E ++Q + L +P Sbjct: 257 -GDLISVYRRLYAVVYEDIGLANSGLGPKVNAAVNASEALGLPEARIPLSQITIELCLSP 315 Query: 345 KSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEV 404 KSN+ A A+ + P HLR+A ++ + Y+Y HD +Y E Sbjct: 316 KSNSAIMAIDEAIQSVNKEA-LSPPNHLRDAHYASAVKLNV-KGYKYPHDYNFSYVEQE- 372 Query: 405 YFPPEIAQTRYYFPT 419 Y P E+ +Y P Sbjct: 373 YLPKELKNKEFYKPN 387 >UniRef50_UPI0001698693 recombination factor protein RarA n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698693 Length = 203 Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 84/135 (62%), Positives = 107/135 (79%), Gaps = 1/135 (0%) Query: 81 ISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 +SAV SGVKEIR A+E+AR R R T+LF+DEVHRFNKSQQDAFLPH+EDGT+ FIG Sbjct: 6 LSAVLSGVKEIRAAVEQARLARQQESRPTLLFIDEVHRFNKSQQDAFLPHVEDGTLVFIG 65 Query: 140 ATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRA 199 ATTENPSFELN+ALLSRAR Y+L++L+ E++EQ++ QA++D RG GG + + E RR Sbjct: 66 ATTENPSFELNNALLSRARTYVLRALAGEELEQIIEQALQDSERGLGGSGLGITPEARRL 125 Query: 200 IAELVNGDARRALNT 214 +AE +GDA L+T Sbjct: 126 LAEAADGDAAACLST 140 >UniRef50_C6CK84 Recombination factor protein RarA n=1 Tax=Dickeya zeae Ech1591 RepID=C6CK84_DICZE Length = 150 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 80/121 (66%), Positives = 94/121 (77%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MSNLSLDFS N FQPLAARMR LAQ I +Q+L GK LPR IEA HSMI+ PPG Sbjct: 1 MSNLSLDFSSNQFQPLAARMRLARLAQLICRQYLPVLGKLLPRTIEARQRHSMIMGWPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGKTTL E++ Y + D+ER+SA TSG+KEIREAIERAR++R A RR+ILFV EVHR +K Sbjct: 61 TGKTTLTELVRHYGHTDMERLSAATSGIKEIREAIERARRSRGAVRRSILFVGEVHRCSK 120 Query: 121 S 121 + Sbjct: 121 A 121 >UniRef50_A5DKE6 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DKE6_PICGU Length = 572 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 129/229 (56%), Gaps = 14/229 (6%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAA-GKPLPRAIEAGHLHSMILWGPPGT 61 +LS+D D+ +PL +RP +L QYIGQ HL + I G+L SMIL GPPG Sbjct: 75 HLSMD--DDLNRPLTELVRPSSLHQYIGQNHLTNHRNGAITNFIRLGYLPSMILHGPPGV 132 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERAR-QNRNAGR------RTILFVDE 114 GKTTLA +IA+ A + +SA + V IR R +NR + R +F+DE Sbjct: 133 GKTTLASIIAKEAGYVMVELSATDATVSTIRRLSNEIRDENRKRTKLGTPHLRVCVFIDE 192 Query: 115 VHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVL 174 +HRF+K QQD LP +E+G F+GATT NP+ L A+ SR +++ L L+ ++++ VL Sbjct: 193 IHRFSKVQQDFLLPFVEEGLFVFLGATTFNPATRLRPAIRSRCQLFKLNELTKDEVKSVL 252 Query: 175 TQ-AMEDKTR---GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + A+ + R YG Q + E I GDAR A+N +EM++ Sbjct: 253 KKAALYENVRRRIVYGKQFLSFSSEVLNHIINTCKGDARSAVNMIEMVS 301 >UniRef50_Q4SLJ4 Chromosome 15 SCAF14556, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SLJ4_TETNG Length = 499 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 69/140 (49%), Positives = 94/140 (67%), Gaps = 5/140 (3%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA-- 71 +PLA +RP+ L +Y GQ ++ L +E+ + S ILWGPPG GKTTLA +IA Sbjct: 159 KPLADILRPDTLEEYFGQNKVIGQQTLLRSLLESEEIPSFILWGPPGCGKTTLAHIIAGK 218 Query: 72 --RYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLP 128 R A +SA ++ V ++RE I++A+ R R+T+LF+DE+HRFNKSQQD FLP Sbjct: 219 CKRKGTARFVTLSATSASVSDVREVIKQAQNELRLCKRKTVLFIDEIHRFNKSQQDTFLP 278 Query: 129 HIEDGTITFIGATTENPSFE 148 H+E GT+ IGATTENPSF+ Sbjct: 279 HVECGTVILIGATTENPSFQ 298 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 138/276 (50%), Gaps = 33/276 (11%) Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRR-------------AIAELVNGDARR 210 S S D+ +V+ QA +++ R + ++ DE R ++ A Sbjct: 234 SASVSDVREVIKQA-QNELRLCKRKTVLFIDEIHRFNKSQQDTFLPHVECGTVILIGATT 292 Query: 211 ALNTLEMMADMAEVDDSGKR-----VLKPELLTEIAGERSARFDNKGDRFYDLISALHKS 265 + + ++ D SG+ ++K E + E +D G+ Y+ ISALHKS Sbjct: 293 ENPSFQAQVSASKADTSGRSASKEILVKEEHIKEGLQRSHILYDKAGEEHYNCISALHKS 352 Query: 266 VRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVG 325 +RGS +A+LYW R++ G DP+YVARR + AS ADP A+ A++A+ +G Sbjct: 353 MRGSDENASLYWLGRMLEGGEDPIYVARRMVRFASL----ADPAALSQAVSAFQACHFIG 408 Query: 326 PAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER--PDYDVPVHLRNAPTKLMKEM 383 E E +AQ +YLA APKS VY A+ A R P VP+HLRNAPT+LMK++ Sbjct: 409 MPECEVILAQCAIYLARAPKSIEVYQAYANVKACLRNHKGPLPSVPLHLRNAPTRLMKDL 468 Query: 384 GYGQEYRYAHDEANAYAAGEV---YFPPEIAQTRYY 416 GY + Y+Y N +G V Y P E+ ++ Sbjct: 469 GYSKGYKY-----NPSFSGPVEQEYLPQELQGVNFF 499 >UniRef50_C4Y4G1 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y4G1_CLAL4 Length = 548 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/229 (36%), Positives = 129/229 (56%), Gaps = 14/229 (6%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGK-PLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 N +PL +RP +L Y+GQ+HL+ + + + G L SMIL+GPPG GKTTLA + Sbjct: 14 NLARPLQEIIRPSSLKDYVGQEHLIDSDDGAISSFLTLGILPSMILYGPPGVGKTTLAHI 73 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNAGR--------RTILFVDEVHRFNKS 121 +A N +SA S + ++RE I +A + N R + ++F+DE+HRF+ + Sbjct: 74 LAAETNHVFLELSATDSTIGDMRE-ISQAIRQENGKRDRSGDLHLKVVVFIDEIHRFSTT 132 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA-MED 180 QQD LP +E G FIGATT NP + A+LSR +++ L+ L + I +VL +A + + Sbjct: 133 QQDFLLPFVEAGDFVFIGATTVNPEKRIRRAILSRCQLFSLRKLDIQHIVKVLQKASLHE 192 Query: 181 KTRG---YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 R G + I E + +A NGD R A+N +E+++ E DD Sbjct: 193 NIRRKKLKGLKFIQYSTEAFQLVASYANGDTRSAINFIELISSRMEGDD 241 >UniRef50_A3LTW2 Replication factor ATPase n=1 Tax=Pichia stipitis RepID=A3LTW2_PICST Length = 786 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 127/216 (58%), Gaps = 12/216 (5%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGK-PLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 PLA +RP +L +YIGQ+HL+ + + +L SM+L+GPPG GKTT+A +IA Sbjct: 22 PLAEAIRPRSLDEYIGQKHLIDPDNGAITNFMRLRYLPSMLLYGPPGVGKTTMASIIAEE 81 Query: 74 ANADVERISAVTSGVKEIRE------AIERARQNRNAGR-RTILFVDEVHRFNKSQQDAF 126 +SA + V ++R+ A R R +R + ++F+DE+HRF SQQD Sbjct: 82 CGYVFVELSATAATVADLRDLSTTIMAENRKRASRGEEELKVVVFIDEIHRFTVSQQDFL 141 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM--EDKTRG 184 LP++E+G FIGATT +P + A+LSR + + L +L+ ++ +VL +AM E+ R Sbjct: 142 LPYVEEGNFVFIGATTIDPRKRIRRAILSRVQCFSLNTLNNNEVLEVLKRAMRFENIRRK 201 Query: 185 --YGGQDIVLPDETRRAIAELVNGDARRALNTLEMM 218 +G + I L D++ I + GD R+A+N +E++ Sbjct: 202 AVHGLRCIDLDDQSLSLIIKTAGGDTRKAINLIELL 237 >UniRef50_Q6BUL9 DEHA2C09570p n=2 Tax=Debaryomyces hansenii RepID=Q6BUL9_DEBHA Length = 842 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 78/224 (34%), Positives = 124/224 (55%), Gaps = 12/224 (5%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGK-PLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR- 72 PL +RP++L + IGQ HL+ + I G+L SMIL GPPG GKT++A ++A+ Sbjct: 157 PLFEVIRPKSLNEVIGQTHLINNHNGTIKNFIRLGYLPSMILHGPPGVGKTSIASILAQE 216 Query: 73 --YANADVERISAVTSGVKEIREAIERARQNRNAGR----RTILFVDEVHRFNKSQQDAF 126 Y + A S +KE+ IE+ + R+ R ++F+DE+HRF K+QQD Sbjct: 217 TGYVFVEFSATDATVSDLKELSITIEKENRKRSKKDMEYLRVVVFIDEIHRFTKTQQDFL 276 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKT 182 LP IE G TFIGATT P + A++SR +++ LK+L + +I+ V+ +A+ + Sbjct: 277 LPFIESGVFTFIGATTLKPETRIRRAIISRCQIFQLKALESYEIDIVIHKAILYENIRRR 336 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 + + DE + NGD R A+N +E+++ +DD Sbjct: 337 ILRNLRSLFYDDECLNLLIRRSNGDTRAAVNLVELVSTHYNIDD 380 >UniRef50_C5M4W5 Predicted protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M4W5_CANTT Length = 498 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 91/309 (29%), Positives = 150/309 (48%), Gaps = 26/309 (8%) Query: 16 LAARMRPENLAQYIGQQHLL-AAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 L +RP +Y+GQ HLL + I+ G+L SMI GPPG GKTTLA VI+ Sbjct: 27 LYEAIRPTTFEEYVGQDHLLNQQNGSIFTFIKLGYLPSMIFLGPPGVGKTTLASVISYEC 86 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 +SA T E+++ + + ++F+DE+HR K QQD LP++E+G Sbjct: 87 KLPFIELSATTLTTGELKQIAMMHEE------QIVVFIDEIHRLTKVQQDWLLPYVENGK 140 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV-LP 193 + IGATT +PS + A+LSR V+ L+ L+T +++ +L +A+ K + + ++ LP Sbjct: 141 MVLIGATTSHPSKRIRHAILSRCHVFCLRRLATPELQIILRKAI--KYQNLKRKHVLNLP 198 Query: 194 D-----ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE----LLTEIAGER 244 + I EL +GD+R A+N +E++++ D G+ LK L + + Sbjct: 199 EIDYDQVCEDLILELAHGDSRIAINLVELISNNYSQTDDGRISLKNHDLKRLFSNLTDSS 258 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALY------WYARIITAGGDPLYVARRCLAI 298 S + F + ++ L S Y +Y + D Y+ + ++ Sbjct: 259 SEGVIKNQEVFMNFMNELCHGCTSSHHSKLFYQNPLEFFYDDFKSKEADEEYIYQMQVSD 318 Query: 299 ASEDVGNAD 307 S DV N D Sbjct: 319 DS-DVENGD 326 >UniRef50_B9WCE8 AAA family ATPase, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WCE8_CANDC Length = 490 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 20/268 (7%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRA-IEAGHLHSMILWGPPGTGKTTLAEVIARYANADV 78 +RP QY+GQ HL+ R I+ G+L SMIL GPPG GKTTLA VI+ Sbjct: 26 IRPTTFEQYVGQDHLINPQNGAIRNFIKLGYLPSMILSGPPGIGKTTLASVISYECGLPF 85 Query: 79 ERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFI 138 +SA T +++ +E + +LF+DE+HR K QQD LP+IE+G I I Sbjct: 86 LELSATTMTTSDLKIIME------THNTQLVLFIDELHRLTKIQQDWLLPYIENGKIILI 139 Query: 139 GATTENP-SFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKTRGYGGQDIVLP 193 GATT P S + A+LSR +++ L+ L +I++VL A+ + Y +IV Sbjct: 140 GATTVQPNSTRIRQAILSRCQIFKLEKLIVPEIKKVLYHAIIFQNLKRKNLYQLGNIVYK 199 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK-- 251 E I GD R A+N +E+++D VD+ L + L +I S ++N Sbjct: 200 SECFDLILNRAQGDCRIAINLVELISDNF-VDNINDVELSKDKLQQIF--HSLNYNNSLG 256 Query: 252 --GDRFYDLISALHKSV-RGSAPDAALY 276 GD + D+++ + + +G + +Y Sbjct: 257 FGGDNYDDIMTRFMRILAQGCSRSKKIY 284 >UniRef50_Q7RDE2 Putative helicase RUVBL n=4 Tax=Plasmodium (Vinckeia) RepID=Q7RDE2_PLAYO Length = 595 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 112/412 (27%), Positives = 179/412 (43%), Gaps = 57/412 (13%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVIARY 73 PL +P YI + + + PL I L+ ++IL GPPG+GK++L VI Sbjct: 158 PLHKLYQPIYKEDYINE--IRSKRNPLLTKILDEDLNFNLILCGPPGSGKSSLINVIKNK 215 Query: 74 ANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + + + + EIR +++ N + + RR IL + +++R NK QQ+ L ++ Sbjct: 216 THNLFITLFHLNNFNTEIRRIYDQSIINYKLSKRRMILCIKDINRLNKPQQEHLLLVLKK 275 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G + NP LN++L SR +YL S + IE L R +I + Sbjct: 276 GYFYLLATCLYNPMNILNASLSSRC-LYLYLS-PYDKIELALIIK-----RIINKLNIEI 328 Query: 193 PDETRRAIAELVNGDARRALNTLEMMAD-----------------------MAEVDDSGK 229 D I +GDAR A+N ++ + + +D+ Sbjct: 329 EDNALNVIISHSSGDARVAINIIDFAIQHMRLEEMKEKEKQEKEKQENKDGIEKKNDTMI 388 Query: 230 RVLKPELLTEIAGERS--------------ARF-------DNKGDRFYDLISALHKSVRG 268 + +K + E E S F DNK D Y+ IS LHKS+R Sbjct: 389 KQVKVKRYNEYFSEGSNAEPNKKIIQINNIKNFLQNFPCNDNKLDH-YNFISGLHKSIRA 447 Query: 269 SAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAE 328 AA+ + + + G DPLY+ RR + IASED+G A+ + + V + +G E Sbjct: 448 GNVKAAILYLTKSLKNGEDPLYICRRLIRIASEDIGIANHKVLSVCVNTHYACKAIGMPE 507 Query: 329 GERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLM 380 + A+ A++ L + KSN +Y K A E +DVP HLRN + + Sbjct: 508 CQTALIYAVIVLCKSSKSNYIYVVEKNAKKICNEYS-FDVPFHLRNTSNRYI 558 >UniRef50_A5DZ06 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DZ06_LODEL Length = 516 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 35/246 (14%) Query: 3 NLSLDFSDNTFQ-PLAARMRPENLAQYIGQQHLLAAGKPL-PRAIEAGHLHSMILWGPPG 60 +S +DN + L+ +RP LA Y+GQ+HLL K + I G+L SM+L GPPG Sbjct: 7 TVSTQVADNGLELSLSEAVRPNTLANYVGQRHLLNEEKGIFANYIRMGYLPSMLLIGPPG 66 Query: 61 TGKTTLAEVIAR---YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHR 117 +GKTTLA ++A+ YA +++ +SA T + I+ + ++ + ++F+DE+HR Sbjct: 67 SGKTTLARLVAKSCGYATSNIIELSATTLTTENIKNLVNDCQE------QLVVFIDEIHR 120 Query: 118 FNKSQQDAFLPHIEDGTITFIGATT-ENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 +K QQD LP +EDG I IGATT E P + A+LSR +V+ L+ L +++ VL Sbjct: 121 LSKVQQDWLLPFVEDGKIVLIGATTLETPLRRIRKAILSRCQVFPLQRLHDDELLSVLHS 180 Query: 177 AME-----------------------DKTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 A++ K ++ D I VNGD R A+N Sbjct: 181 AIDFENQRRSRRSRNNNNTNNDREELGKAETSKSGELKFSDNALLGIVRAVNGDIRAAIN 240 Query: 214 TLEMMA 219 T+E ++ Sbjct: 241 TIERVS 246 >UniRef50_C4YKF6 Putative uncharacterized protein n=2 Tax=Candida albicans RepID=C4YKF6_CANAL Length = 552 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 118/227 (51%), Gaps = 29/227 (12%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAI----EAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 +RP QY+GQ HL+ P+ AI + G+L SMI GP G GKTTLA VI+ Sbjct: 30 IRPTTFEQYVGQDHLI---NPIDGAIRNFIKLGYLPSMIFTGPSGIGKTTLASVISYECG 86 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAG--------RRTILFVDEVHRFNKSQQDAFL 127 +SA T +++ I + Q ++ +LF+DE+HR K QQD L Sbjct: 87 LPFLELSATTMTTMDLKTTIMQKNQKNQKNQKNQNVGEQKIVLFIDELHRLTKIQQDWLL 146 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM--EDKTRGY 185 P++E+G I IGATT P+ + A+LSR +V+ L+ L+ ++I++VL QA+ ++ R + Sbjct: 147 PYLENGEIVLIGATTIQPNTRIRQAILSRCQVFKLEKLTRKEIKKVLCQAITFQNLKRKH 206 Query: 186 GGQ------------DIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 Q DE I + GD R A+N +E+++D Sbjct: 207 LYQLGAIVYDDDDEEQGDGVDECFDLILDRAQGDCRIAINLIELISD 253 >UniRef50_A4A3A9 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A3A9_9GAMM Length = 126 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 46/92 (50%), Positives = 60/92 (65%) Query: 21 RPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVER 80 RP + +GQ HLL GKPL R + LHSMILWGPPG GKTTLA+++ + + + + Sbjct: 20 RPTAAIEVVGQSHLLGDGKPLARCLRGEPLHSMILWGPPGVGKTTLAQLLCDASGSRMVK 79 Query: 81 ISAVTSGVKEIREAIERARQNRNAGRRTILFV 112 +SAV GVK IREA+ R AGR+ +LFV Sbjct: 80 LSAVMDGVKAIREAVSVGEAERGAGRQCVLFV 111 >UniRef50_Q8IIN7 Conserved Plasmodium protein n=2 Tax=Plasmodium RepID=Q8IIN7_PLAF7 Length = 707 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 7/180 (3%) Query: 229 KRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP 288 K+V+K + EI + D+K D Y+ IS LHKS+R AA+ + + + G DP Sbjct: 522 KKVIKLNHIKEILQNFPSN-DDKLDH-YNFISGLHKSIRAGNVKAAILYLMKSLKNGEDP 579 Query: 289 LYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNA 348 +Y+ RR + IASED+G A+ + + I +G E + ++ A++ L + KSN Sbjct: 580 IYICRRLIRIASEDIGLANHDVLSICINTHYACKAIGMPECQTSLIYAVMVLCKSAKSNY 639 Query: 349 VYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDE-ANAYAAGEVYFP 407 +Y A E ++DVP HLRN+ K + Q ++DE N Y + Y P Sbjct: 640 IYLVENTAKQICNEY-NFDVPFHLRNSSNKY---IYTNQPEILSYDEHVNKYKDAQKYLP 695 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 8/167 (4%) Query: 52 SMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTIL 110 ++IL GPPG+GK++L VI N + + + E+R+ +++ N + + +++IL Sbjct: 215 NLILCGPPGSGKSSLVNVIRNKTNNCFISLFHLNNLNNELRKVYDKSVINYKISKKKSIL 274 Query: 111 FVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDI 170 + +++R NKSQQ+ L ++ G + NP LN++L SR L S ++ Sbjct: 275 CIKDINRLNKSQQENLLLILKKGYFYLLATCLFNPMNILNASLSSRCLYLYLNSYEKTEL 334 Query: 171 EQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEM 217 E ++ R DI + ++ I GDAR A+N ++ Sbjct: 335 ELII-------KRITNKLDIQIEEDALNLIMNHSCGDARVAINIIDF 374 >UniRef50_B3L4S8 Putative uncharacterized protein n=2 Tax=Plasmodium (Plasmodium) RepID=B3L4S8_PLAKH Length = 655 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 2/130 (1%) Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 DNK D F + IS LHKS+R AA+ + + + G DPLY+ RR + IASED+G A+ Sbjct: 489 DNKLDHF-NFISGLHKSIRAGNVKAAILYLTKSLKNGEDPLYICRRLIRIASEDIGLANH 547 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDV 368 + + I +G E + ++ A++ L + KSN +Y A E +DV Sbjct: 548 DVLSICINTHYACKAIGMPECQTSLIYAVIVLCKSSKSNYIYVVENNAKQICNEYR-FDV 606 Query: 369 PVHLRNAPTK 378 P HLRN + Sbjct: 607 PFHLRNTSNR 616 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 8/167 (4%) Query: 52 SMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTIL 110 ++IL GPPG+GK++L VI N + + + E+R+ +++ N + + +RTIL Sbjct: 226 NLILCGPPGSGKSSLVNVIKNKTNNLFISLFHLNNLNNELRKIYDQSVINYKLSKKRTIL 285 Query: 111 FVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDI 170 + +++R NK+QQ+ L ++ G + NP LN++L SR L + ++ Sbjct: 286 CIKDINRLNKNQQENLLLILKKGYFYLLATCLFNPMNILNASLSSRCLYLYLNAYDKIEL 345 Query: 171 EQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEM 217 ++ + + DI + D I GDAR A+N +E Sbjct: 346 ALIIKRII-------NKLDIDIEDNALNIIMNHSCGDARVAINMIEF 385 >UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ85_9FIRM Length = 525 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 40/248 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP+ A +GQQH+ + L A+E L H+ + GP GTGKT+ A+++A Sbjct: 2 YQALYRQWRPQFFADMVGQQHV---ARTLQNALEQDRLAHAYLFCGPRGTGKTSAAKILA 58 Query: 72 RYANA------------------------DVERISAVTS-GVKEIREAIERARQNRNAGR 106 + N DV+ I A ++ G+ EIRE E+AR + R Sbjct: 59 KAINCEKGPSREPCNECAACRGIQAGRVMDVQEIDAASNRGIDEIRELREKARYSPVEVR 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + VDEVH + +A L +E+ G + F+ ATTE +L + ++SR + Sbjct: 119 HKVYIVDEVHMLTQEAFNALLKTLEEPPGRVLFVLATTE--PHKLPATIISRCQRLDFHL 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + DI + L ++D R + D+ IAE G R AL+ LE + +E Sbjct: 177 IGMTDIAERLRSVVDDSGRS-------IQDDALYLIAEEAAGGLRDALSLLEQIMAYSEG 229 Query: 225 DDSGKRVL 232 + S + VL Sbjct: 230 NISDEDVL 237 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 44/245 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVIA 71 +Q LA + RP+ A +GQ+H++ K L A++ G LH + +L G G GKTT+A ++A Sbjct: 3 YQVLARKWRPKTFADLVGQEHVV---KALRNALDEGRLHHAYLLTGTRGVGKTTIARILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A +G+ IRE +E A+ AG+ Sbjct: 60 KSLNCENAVHGEPCGQCESCTQIDSGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGK 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +KS +A L +E+ + FI ATT+ + +LSR ++L++ Sbjct: 120 YKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKVPIT--VLSRCLQFVLRN 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++T+ + + L ++ + Y Q + L RA A G R AL+ L+ M Sbjct: 178 MTTQQVAEHLAHVLDRENVPYQPQALQL---LGRAAA----GSMRDALSLLDQAIAMG-- 228 Query: 225 DDSGK 229 SGK Sbjct: 229 --SGK 231 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 33/202 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVI 70 T+Q LA + RP+ + +GQ+H++ K L A++ G LH + +L G G GKTT+A ++ Sbjct: 31 TYQVLARKWRPKTFSDLVGQEHVV---KALQNALDEGRLHHAYLLTGTRGVGKTTIARIL 87 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A +G+ IRE +E A+ AG Sbjct: 88 AKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAG 147 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH +KS +A L +E+ + FI ATT+ ++ +LSR ++L+ Sbjct: 148 KYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTD--PHKVPVTVLSRCLQFVLR 205 Query: 164 SLSTEDIEQVLTQAMEDKTRGY 185 +++ + + L ++ + Y Sbjct: 206 NMTAQQVADHLAHVLDSEKIAY 227 >UniRef50_C5NYK0 DNA polymerase III subunit gamma/tau n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK0_9BACL Length = 569 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 25/224 (11%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 FQ L + RP+ +GQ H+++ L AI+ + H+ + +G GTGKT++A++ A Sbjct: 2 FQALYRKYRPQTFNDIVGQNHIVSV---LKNAIDKDQISHAYLFYGSRGTGKTSIAKIFA 58 Query: 72 RYANAD----------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 N + +E +A +GV E+R+ E + G+ + +DEVH + Sbjct: 59 NEVNGNEIYQKENVDIIEIDAASNNGVDEVRDIKEAIKFLPTEGKYKVYIIDEVHMLTTA 118 Query: 122 QQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 +A L +E+ + FI ATTE ++ + +LSR + + K+LS E + L + Sbjct: 119 AFNALLKTLEEPPAHVIFILATTE--IHKIPATILSRCQRFEFKNLSQEQLIDRLKYIAK 176 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + +++V+ + IA L G R A++ L+ +++ AE Sbjct: 177 E-------ENLVIEEAAIEKIATLAKGGLRDAISILDQVSNYAE 213 >UniRef50_C7M8P5 DNA polymerase III, subunits gamma and tau n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M8P5_CAPOD Length = 569 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 29/229 (12%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 N F A + RP++ +GQQ A L AIE HL +++ GP G GKTT A + Sbjct: 2 NHFIVSARKYRPQSFRDVVGQQ---AITNTLLNAIENNHLAQALLFTGPRGVGKTTCARI 58 Query: 70 IARYANADVERI--------------SAVTSGVKEIREAIERARQNRNAGRRTILFVDEV 115 +A+ N + +A + V +IR+ IE+ R G+ + +DEV Sbjct: 59 LAKKINEQTSGVEDENDFAFNVFELDAASNNSVDDIRKLIEQVRIPPQVGKYKVYIIDEV 118 Query: 116 HRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQV 173 H + + +AFL +E+ FI ATTE ++ +LSR +++ K ++ DI + Sbjct: 119 HMLSTAAFNAFLKTLEEPPKHAIFILATTE--KHKIIPTILSRCQIFDFKRITINDIREY 176 Query: 174 LTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 L E Q I DE + IA+ +G R AL+ + + + Sbjct: 177 LKYIAEQ-------QGIEAEDEALQIIAQKADGAMRDALSIFDRVVSFS 218 >UniRef50_C0QV83 DNA polymerase III, gamma and tau subunits n=2 Tax=Brachyspira RepID=C0QV83_BRAHW Length = 527 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 40/234 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++ +A + RP+ + IGQ+H+ K + ++I + H+ + G G GKT+LA +IA Sbjct: 5 YKVIARKYRPQTFEEVIGQEHI---TKTISKSIAQKKIAHAYLFSGAHGVGKTSLARIIA 61 Query: 72 RYANA------------------------DVERISAVTS-GVKEIREAIERARQNRNAGR 106 + N DV I ++ G++ IR IE R + AG+ Sbjct: 62 KALNCVNGPTDKPCGVCPSCTQIENGTPLDVIEIDGASNRGIENIRTIIENVRISPVAGK 121 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH+ +A L +E+ + FI ATTE + + + SR + Y KS Sbjct: 122 YKVYIIDEVHQITNEAFNALLKTLEEPPAHVVFILATTE--AERVLPTIRSRCQQYTFKS 179 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM 218 L ED+E++L ++ + Y + I L IA+ G R + LE M Sbjct: 180 LGIEDLEKILKGILDKENIKYDEEAIFL-------IAKQARGSVRDSETILEKM 226 >UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S3_COPPD Length = 522 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 57/331 (17%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYA 74 L + RP+ + +GQ H+ + L +A++ + H+ + GP G+GKT+ A + A+ Sbjct: 3 LYRKYRPQTFEEVVGQSHV---TEILTKALDNQKISHAYLFAGPKGSGKTSCARIFAKGL 59 Query: 75 NA------------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTI 109 N DV I A ++ GV EIRE ER + R + Sbjct: 60 NCETGITSKPCNECESCKLINEGHSLDVIEIDAASNRGVDEIRELRERVKYRPAQSRYKV 119 Query: 110 LFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DE H + +A L +E+ + FI ATT +P ++ +LSR + + K L++ Sbjct: 120 YIIDEAHMLTREAFNALLKTLEEPPEYVVFILATT-DPQ-KIPPTVLSRCQRFRFKKLTS 177 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS 227 +++ Q+L K+ G+ Q E IAE+ +G R ALN LE ++ V D Sbjct: 178 DEVFQILENVC--KSEGFSYQ-----REALELIAEVSDGAVRDALNLLEQIS----VVDE 226 Query: 228 GKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGD 287 GK +K E D F D+ D A+ A ++ +G + Sbjct: 227 GKVSIKTARFLLNVVEDEVILDLLKTAFADM-------------DEAVERLAELMESGVE 273 Query: 288 PLYVARRCLAIASEDVGNADPRAMQVAIAAW 318 P+ + R ++ V P VA+ + Sbjct: 274 PMELFRTMKSLVRRSVFRNKPWPRDVALEMF 304 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 35/193 (18%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP A+ +GQQH+L KPL A++ LH L+ G G GKTT+A ++ Sbjct: 2 SYQVLARKWRPSQFAEVVGQQHVL---KPLEHALDKQRLHHAYLFTGTRGVGKTTIARIL 58 Query: 71 ARYANADVERISAVTSG--------------------------VKEIREAIERARQNRNA 104 A+ N + E I+A G V++ RE ++ + Sbjct: 59 AKALNCE-EGITATPCGKCSACLEIEQGRFVDLLEIDAASRTKVEDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++ +A L +E+ + F+ ATT +P +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATT-DPQ-KLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLT 175 K+LS +DI Q L+ Sbjct: 176 KALSNDDITQQLS 188 >UniRef50_A6FBQ8 Hypothetical DNA polymerase III, subunits gamma and tau n=1 Tax=Moritella sp. PE36 RepID=A6FBQ8_9GAMM Length = 814 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 40/230 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 ++Q LA + RP N Q +GQQH+L A L A+E L H+ +L G G GKTT+A + Sbjct: 2 SYQVLARKWRPHNFQQVVGQQHVLTA---LVNALEQDRLHHAYLLSGTRGVGKTTIARIF 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V++ RE ++ + G Sbjct: 59 AKSLNCEKGITSTPCGECSTCVEIDQGCYVDLLEIDAASRTKVEDTRELLDNVQYKPARG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH +K +A L +E+ + F+ ATT+ + +LSR + LK Sbjct: 119 RFKVYLIDEVHMLSKHSFNALLKTLEEPPEYVKFLLATTDPQKLPIT--ILSRCLQFHLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 L+TE I Q L + + Y + +IA+ +G R AL+ Sbjct: 177 CLTTEQISQQLVHILSREHCQYELSAL-------NSIAKAADGSMRDALS 219 >UniRef50_B4VVC8 DNA polymerase III, subunits gamma and tau n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VVC8_9CYAN Length = 379 Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 58/321 (18%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLA 67 S ++QP + RP+NL++ +GQ ++ + L ++ G+L ++ L+ GP GTGKT+ A Sbjct: 3 SQQSYQPWHLKYRPQNLSELVGQPLIV---RTLTNELKTGNLPNVFLFDGPRGTGKTSTA 59 Query: 68 EVIARY--------------------------ANADVERISAVTS-GVKEIREAIERARQ 100 + A+ +N DV + A ++ GV +IRE I ++ Sbjct: 60 RIFAKSLNCLSSSQPTLTPCGTCLSCRSICSGSNLDVRELDAASNNGVDDIRELINYSKL 119 Query: 101 NRNAGRRTILFVDEVHRFNKSQQDAFLPHIED---GTITFIGATTENPSFELNSALLSRA 157 + R I+++DE ++S Q+A L ED TI FI ATTE S +L ++SR Sbjct: 120 S-TTNRYRIIYLDECQMLSRSAQNAALKLFEDRLPNTI-FILATTE--SEKLLDTIISRC 175 Query: 158 RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEM 217 + + + LST+DI + L+Q + + I E R IA+ G R ++ LE Sbjct: 176 QHFQFRRLSTQDITERLSQITLN-------EKISANPEALRLIAQHSQGGMRDSVQLLEQ 228 Query: 218 MADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYW 277 +A + +GK ++P + ++ G A D DL ++ + + + Sbjct: 229 LA----MSTNGK--IEPHHVRDVIGSIPA------DSLVDLCVSIFQDTPQRLHN-LMAL 275 Query: 278 YARIITAGGDPLYVARRCLAI 298 ++ G +P+++ + LAI Sbjct: 276 SNQLNDEGVEPVHLVKELLAI 296 >UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERB2_AMOA5 Length = 629 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 80/324 (24%), Positives = 132/324 (40%), Gaps = 57/324 (17%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYAN 75 A + RP + +GQ H+ L AI HL H+ + GP G GKTT A ++A+ N Sbjct: 8 ARKYRPSVFSHVLGQAHITTT---LKNAIRTNHLAHAFLFCGPRGVGKTTCARILAKAIN 64 Query: 76 -----ADVERISAVTS---------------------GVKEIREAIERARQNRNAGRRTI 109 AD+E +A S V+++R +++ R G I Sbjct: 65 CQQLTADIEPCNACDSCKSFNQRTSFNIYELDAASNNSVEDVRSLVDQVRYPPQNGAYKI 124 Query: 110 LFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH +++ +AFL +E+ FI ATTE ++ +LSR +++ + + Sbjct: 125 YIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTE--KHKVLPTILSRCQIFDFQRIKP 182 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS 227 EDI Q L E + Y +E I+ +G R AL+ +++ + Sbjct: 183 EDIVQQLKNVSEQEHIPYD-------EEALHLISLKADGALRDALSMFDVIVSFG----A 231 Query: 228 GKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGD 287 GK + A +N Y L +++ + A L Y II +G D Sbjct: 232 GKLTYE------------ATLENLHILDYSCYFKLTEAILQNDIKACLLIYDEIIQSGFD 279 Query: 288 PLYVARRCLAIASEDVGNADPRAM 311 LY +A + DP+ + Sbjct: 280 GLYFLEGLVAHFRSLLVAQDPQTL 303 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 39/232 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 +++ L RP + + +GQQH++ L A++ + H+ + GP GTGKTT+A+++ Sbjct: 2 SYKALYRTYRPSSFEEVVGQQHIVTT---LKNAVKQNKIAHAYLFCGPRGTGKTTIAKLL 58 Query: 71 ARYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 A+ N + VE +A +GV E+RE IE+ + GR Sbjct: 59 AKAVNCEDQQNAPCNQCRSCLAIQQGNHPDIVEIDAASNNGVDEVRELIEKVKYAPLEGR 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE P L + ++SR + Y Sbjct: 119 YKVYIIDEVHMMSSGAFNALLKTLEEPPSHVIFILATTE-PQKVLPT-IISRCQRYDFSK 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 + +I + +E + I DE R +A+L +G R AL+ ++ Sbjct: 177 VGQNEIITRVRCVLEQ-------EHIECEDEALRLVAQLADGGMRDALSIMD 221 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 39/231 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP N + +GQ H++ + L AI + H+ + GP GTGKT++A++ A Sbjct: 3 YQALYRKYRPSNFDEVVGQTHII---QTLKNAIIQNRIAHAYLFCGPRGTGKTSIAKIFA 59 Query: 72 RYANA-----------------------DVERISAVTS-GVKEIREAIERARQNRNAGRR 107 + N D+ I A ++ GV E+R I++ + G+ Sbjct: 60 KTLNCTNSQDAPCGVCENCKMAANGSHPDIIEIDAASNNGVDEVRNLIDKVKYAPMQGKY 119 Query: 108 TILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSL 165 I +DEVH +A L IE+ + FI ATTE P+ L ++SR + + + Sbjct: 120 KIYIIDEVHMMTSGAFNALLKTIEEPPAHVIFIFATTE-PNKVL-PTIISRCQRFDFNKV 177 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 S DI+ L+ ++ + I + + IA+L +G R AL+ L+ Sbjct: 178 SVNDIKYRLSVVCKN-------EGIEIDQDGLTLIAQLADGGMRDALSILD 221 >UniRef50_C0DT09 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DT09_EIKCO Length = 754 Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 33/201 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVIA 71 +Q LA + RP+ A +GQ+H++ A L A+ G LH + +L G G GKTT+A ++A Sbjct: 3 YQVLARKWRPKTFADLVGQEHVVKA---LQNALGKGRLHHAYLLTGTRGVGKTTIARILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A +G+ IRE +E A+ AG+ Sbjct: 60 KSLNCETPHEGEPCGQCQSCRDIDAGRFVDLLEIDAASNTGIDNIREVLENAQYAPTAGK 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +KS +A L +E+ + FI ATT+ ++ +LSR ++L++ Sbjct: 120 YKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTD--PHKVPVTVLSRCLQFVLRN 177 Query: 165 LSTEDIEQVLTQAMEDKTRGY 185 ++ + + Q L + + Y Sbjct: 178 MTAQQVSQHLAHVLTSEQIPY 198 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 123/278 (44%), Gaps = 50/278 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP+ +GQ+H++ L AI + H+ + GP GTGKT++A+V A Sbjct: 3 YQALYRQWRPKYFRDLVGQEHVVTT---LKNAISQSRISHAYLFSGPRGTGKTSVAKVFA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N D +E +A G+ EIRE + + + G Sbjct: 60 KALNCDHSQDNEPCGQCSRCIEHDRGTFMDILEIDAASNRGIDEIREIRDHVAYSPSEGN 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + VDEVH +A L +E+ + FI ATTE +L +LSR + + Sbjct: 120 YKVYIVDEVHMLTTEAFNALLKTLEEPPDYVIFILATTE--PHKLPMTVLSRCQRFDFYR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 LST IE+ L ++ K ++ E+ IA+ +G R AL+ L+ Sbjct: 178 LSTSKIEKQLQNVIDSK-------NLSATKESLSIIAKKSDGGMRDALSLLDQSLSFL-- 228 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISAL 262 SG++ LK + + E+ G S D FYDL+ AL Sbjct: 229 -GSGEQ-LKVDHVLEVTGTVSE------DTFYDLLMAL 258 >UniRef50_B9Z526 DNA polymerase III, subunits gamma and tau n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z526_9NEIS Length = 657 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 33/212 (15%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPG 60 L L+ + T+Q LA + RP+ A +GQ+H++ A L A+ LH + +L G G Sbjct: 13 CQLELESATMTYQVLARKWRPKRFADLVGQEHVVRA---LTNALAGERLHHAYLLTGTRG 69 Query: 61 TGKTTLAEVIARYANAD-------------------------VERISAVTSGVKEIREAI 95 GKTT+A ++A+ N + +E +A +G+ IRE + Sbjct: 70 VGKTTIARILAKSLNCEAGVGAEPCGECSACRQIDAGRFVDLLEIDAASNTGIDNIREVL 129 Query: 96 ERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSAL 153 E A+ +GR + +DEVH +KS +A L +E+ + FI ATT+ + + Sbjct: 130 ENAQYAPTSGRYKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVT--V 187 Query: 154 LSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY 185 LSR + L++++ + + L + ++ + Y Sbjct: 188 LSRCLQFSLRNMTPQQVAGHLARVLDVEQVSY 219 >UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR83_9FIRM Length = 638 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 82/298 (27%), Positives = 121/298 (40%), Gaps = 55/298 (18%) Query: 19 RMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANA- 76 + RP + IGQ+H+ P+ RA E L H+ + GP GTGKT++A ++A+ N Sbjct: 9 KWRPSTFKEIIGQKHI---SIPILRAFEQNRLAHAYLFSGPRGTGKTSMARILAKAVNCL 65 Query: 77 -----------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTILFV 112 DV I ++ GV EIR E R AG + + + Sbjct: 66 DLKNGNPCNECANCKSINTGASMDVYEIDGASARGVDEIRVLRESVRTLPVAGNKKVYII 125 Query: 113 DEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDI 170 DEVH K +A L +E+ + FI ATTE L +LSR + Y +S DI Sbjct: 126 DEVHMLTKEAFNALLKTLEEPPAHVLFILATTEPAKIPLT--ILSRCQRYEFHRISVNDI 183 Query: 171 EQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR 230 ++ L ++ + L E IA G R AL+ L D +G Sbjct: 184 KEHLLHISQE-------SHLSLTPEAAALIAVRAEGGLRDALSLL----DQCSGASAGN- 231 Query: 231 VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP 288 EL EI + D + +I H V G + A L + +I+ G +P Sbjct: 232 ----ELSAEIVYDLLGLTDKE-----QIIDLFHMIVCGKS-SATLQLFYKILQDGKEP 279 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 46/244 (18%) Query: 19 RMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANA- 76 + RP+ +GQ+H+ + L AI +GH+ H+ + GP GTGKT+ A+++A+ N Sbjct: 9 KWRPQTFKDLVGQEHI---SRTLANAITSGHIGHAYLFAGPRGTGKTSTAKILAKALNCE 65 Query: 77 -----------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTILFV 112 DV I A ++ G+ EIR+ E + GR + + Sbjct: 66 HGPTPEPCGQCEQCRKIADGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVDGRYKVYII 125 Query: 113 DEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDI 170 DEVH +A L +E+ + FI ATTE + ++ + SR + Y K ++ E+I Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPAHVVFILATTE--AHKVPPTIQSRCQRYDFKRITVEEI 183 Query: 171 EQVL---TQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS 227 E L T M+ + DE IA +G R AL+ L+ A +AE + Sbjct: 184 ESRLRYITAEMKMEAE----------DEALAMIAIQADGGMRDALSILDQCAALAEGTIT 233 Query: 228 GKRV 231 +RV Sbjct: 234 AERV 237 >UniRef50_Q8K983 DNA polymerase III subunit gamma n=19 Tax=Bacteria RepID=DPO3X_BUCAP Length = 363 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 40/233 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVI 70 +Q LA + RP++ + IGQ++++ A + G +H + +L G G GKTT+A +I Sbjct: 2 NYQILARKWRPQSFKKIIGQKYIVKA---ISNGFSLGKIHHAWLLSGTRGVGKTTIARLI 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V+EIRE ++ + Sbjct: 59 AKSLNCEIGITSLPCRKCTICQEIEKGICLDFIEIDAASRTKVEEIREILDNIYYTPSKS 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH ++ +A L +E+ I FI ATT+ ++ + SR + L Sbjct: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPQHIKFILATTDVE--KIPKTIRSRCLHFKLN 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 LS EDI L ++ GG + +E + I++ NG R ALN LE Sbjct: 177 ILSEEDIFNFLKHILKK-----GGNN--FDEEALKIISDYANGSMRDALNLLE 222 >UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDS2_THEAB Length = 480 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 40/241 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 Q L + RP+ ++ +GQ H+ +++ G + H+ I GP GTGKTT+A ++A Sbjct: 1 MQALYRKYRPKLFSEVVGQNHVKTL---FLNSLKNGEISHAYIFAGPRGTGKTTVARILA 57 Query: 72 RYANA------------------------DVERISAVTS-GVKEIREAIERARQNRNAGR 106 + N DV I A ++ G+ EIR+ E + G Sbjct: 58 KSLNCENKNGVEPCNKCNTCQSIDNGSFMDVLEIDAASNRGIDEIRKIRETVGYHAAQGN 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH K +A L +E+ + FI ATT NP ++ ++SR +V K+ Sbjct: 118 YKVYIIDEVHMLTKEAFNALLKTLEEPPSNVVFILATT-NPE-KIPQTIISRCQVIDFKN 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L+ EDI + L + ++I + E IA+ NG R AL LE ++ + Sbjct: 176 LTIEDIIKRLEFVCK-------KENINISQEALNEIAKRANGGMRDALTILEQVSKSSSK 228 Query: 225 D 225 D Sbjct: 229 D 229 >UniRef50_A7HJD6 Holliday junction ATP-dependent DNA helicase ruvB n=2 Tax=Bacteria RepID=RUVB_FERNB Length = 347 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 45/235 (19%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAG-----HLHSMILWGPPGTGKTTLAEVIARYA 74 +RP+ L++YIGQ+++ + L AI+A L ++L GPPG GKTTLA +IA Sbjct: 25 LRPKFLSEYIGQENI---KERLKLAIQASKMRGEQLDHILLAGPPGLGKTTLATIIANEL 81 Query: 75 NADVERISAVTSG-VKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 NA++ VTSG + E + + N AG +LF+DE+HR N++ ++ +ED Sbjct: 82 NANIH----VTSGPILEKQGDLAAILTNLEAG--DVLFIDEIHRMNRNVEEILYSAMEDF 135 Query: 134 TI--------------------TFIGATTENPSFELNSALLSR-ARVYLLKSLSTEDIEQ 172 + T IGATT S L S L +R ++ + + E+++ Sbjct: 136 QVDIMIGKGPAARSIRVELQPFTLIGATTR--SGLLTSPLRNRFGMIFEMNFYTQEELKM 193 Query: 173 VLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS 227 ++T+A E ++ D+ +IA+ G R A+ L+ + D++ V S Sbjct: 194 IITRAAEV-------MGTLIDDDAALSIAKRSRGTPRIAIRLLKRVRDLSTVRGS 241 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 42/251 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVI 70 ++Q LA + RP+ A +GQ+H++ A L A++ LH + +L G G GKTT+A ++ Sbjct: 2 SYQVLARKWRPKRFADLVGQEHVVRA---LSNALKEQRLHHAYLLTGTRGVGKTTIARIL 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A +G+ IRE +E A+ G Sbjct: 59 AKSLNCETGTTAEPCGECQACRQIDSGRFVDLLEIDAASNTGIDNIREVLENAQYAPTMG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH +KS +A L +E+ G + FI ATT+ + +LSR + L+ Sbjct: 119 RFKVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTDPQKVPVT--VLSRCLQFSLR 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE--MMADM 221 +++ + + L ++ + Y + L + +G R A + L+ + + Sbjct: 177 NMTPQQVSSHLAHMLDIEGIHYEAPALAL-------LGRAASGSMRDAQSLLDQAIAYGL 229 Query: 222 AEVDDSGKRVL 232 EV + G R + Sbjct: 230 GEVKEDGVRAM 240 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 40/229 (17%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIARYA 74 LA + RP++ A+ +GQ H+L A L A++ LH L+ G G GKTT+A + A+ Sbjct: 6 LARKWRPKSFAEMVGQGHVLQA---LTNALDQSRLHHAYLFTGTRGVGKTTVARIFAKAL 62 Query: 75 NAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRTI 109 N + +E +A +GV + R+ +E GR I Sbjct: 63 NCEHGISSTPCGVCSACVEIDQGRFVDLIEVDAASRTGVDDTRDLLENVAYAPVRGRFKI 122 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH F+KS +A L +E+ + F+ ATT +P +L +LSR + L++L Sbjct: 123 YLIDEVHMFSKSSFNALLKTLEEPPEHVKFLLATT-DPQ-KLPVTVLSRCLQFNLRALPL 180 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 I+Q L ++ ++I IAE NG R AL+ L+ Sbjct: 181 SQIQQHLADVLQK-------ENIAFEPAALHLIAEAANGSMRDALSLLD 222 >UniRef50_Q4A6Z5 DNA polymerase III gamma and tau subunit n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A6Z5_MYCS5 Length = 609 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 35/232 (15%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++ L + RP+N + IGQ H++ + L I + + H+ + GP GTGKT+ A V A Sbjct: 3 YKSLYRKYRPQNFHEIIGQDHII---QTLDNVISSEKIAHAFLFAGPKGTGKTSTARVFA 59 Query: 72 RYANAD--------------------VERISAVTSGVKEIREAIERARQNRNAGRRTILF 111 + N +E +A +GV EIR E Q + I Sbjct: 60 KALNCSHSEVRSQICESCPNQNSGDIIEMDAASNTGVDEIRNLKENVDQLPFESKYKIYI 119 Query: 112 VDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTED 169 +DEVH +KS +A L +E+ + FI ATT+ + +LSR + + + +S + Sbjct: 120 IDEVHMLSKSAFNALLKTLEEPPSYVIFILATTDVQKVPI--TILSRVQSFNFRRISEKQ 177 Query: 170 IEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 I L + ++I E IA+L +G R AL E +++ Sbjct: 178 IVAQLENIL-------NKENISFEKEALMLIAQLSSGGLRDALTIAEQISNF 222 >UniRef50_UPI0001903DAA recombination factor protein RarA n=1 Tax=Rhizobium etli 8C-3 RepID=UPI0001903DAA Length = 93 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 46/69 (66%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R+RP+ LA+ GQ+HL L R IE+G L SMI WGPPGTGKTT+A +++ Sbjct: 18 RPLADRLRPKTLAEVTGQEHLTGEDGVLKRMIESGSLGSMIFWGPPGTGKTTVARLLSGE 77 Query: 74 ANADVERIS 82 A A IS Sbjct: 78 AGAGPSSIS 86 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 82/348 (23%), Positives = 144/348 (41%), Gaps = 72/348 (20%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYA 74 L + RP+ IGQ H+ L +I+ + H+ + GP GTGKT+ A++ A+ Sbjct: 8 LYRKYRPQGFDNLIGQNHV---KNTLENSIKHNKVAHAYLFTGPRGTGKTSAAKIFAKLL 64 Query: 75 NAD---------------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVD 113 N +E +A +GV +IR+ E+ G++ + +D Sbjct: 65 NCQSPIDYNPCGECVCCQDSNTDIIEMDAASNNGVDDIRDLREKVNYAPAFGKKKVYIID 124 Query: 114 EVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIE 171 EVH + + +A L +E+ I FI ATTE ++ + +LSR + Y + +S +DI Sbjct: 125 EVHMLSTAAFNALLKTLEEPPAHIVFILATTE--PHKIPATILSRCQRYDFRRISQDDIV 182 Query: 172 QVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV 231 + +E + + + ++ R I+++ G R AL+ L+ E GK Sbjct: 183 HRMKTIVE-------AESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVE----GKVT 231 Query: 232 LKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP--- 288 L+ + EI G R I L + + S + AL + +G +P Sbjct: 232 LQD--IIEITGAVDTR----------KIGTLIQYINQSNIEGALEHFNTCFESGQEPHFF 279 Query: 289 ----------LYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGP 326 + V R+ A+ G+ DP+ ++A VGP Sbjct: 280 LEEMMIYLRDILVNRKLGEKATLKKGHNDPQFYEIA-------NSVGP 320 >UniRef50_Q601S8 DNA polymerase III gamma-tau subunits n=5 Tax=Mycoplasma hyopneumoniae RepID=Q601S8_MYCH2 Length = 726 Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 35/225 (15%) Query: 19 RMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANAD- 77 + RP+ + +GQ+ LL + K + ++ H+ + GP GTGKTT+A++ A N Sbjct: 18 KYRPKKFSDIVGQKFLLESLKNIIKS--GNFFHAYLFSGPHGTGKTTVAKIFANAINCTH 75 Query: 78 ---------------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVH 116 +E +A +GVKEIRE IE + I +DEVH Sbjct: 76 KTDLIEPCQNCIKNFNNSLDIIEMDAASHNGVKEIREIIENSINFPQISPYKIYILDEVH 135 Query: 117 RFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVL 174 + S +AFL +E+ + FI ATTE L +LSR + Y +L ++I L Sbjct: 136 MLSTSAFNAFLKTLEEPPKHMIFILATTEVHKIPL--TILSRVQRYNFLALKEDEICHRL 193 Query: 175 TQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 +E + Y + +++ L G R A++ LE +A Sbjct: 194 EFILEKEKIKYEKNAL-------KSVFLLSQGSLRDAISILEQVA 231 >UniRef50_C9RKH0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKH0_FIBSS Length = 575 Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 40/229 (17%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIARYA 74 +A + RP++ + +GQ+H+ K L AI+ G LH L+ G G GKTT A ++AR Sbjct: 6 MARKWRPQSFSDMVGQEHI---AKTLENAIQGGRLHHAFLFTGTRGVGKTTSARILARTL 62 Query: 75 NA------------------------DVERISAVT-SGVKEIREAIERARQNRNAGRRTI 109 N DV I A + + V IR+ IER + G+ I Sbjct: 63 NCKGSDPLHPCGECDSCKDIAGGNPMDVYEIDAASNTSVDNIRDVIERVQYPPVIGKYKI 122 Query: 110 LFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH + +A L +E+ + FI ATTE ++ +LSR + + K L+ Sbjct: 123 FIIDEVHMLSTGAFNALLKTLEEPPAHVIFIFATTEVN--KVPQTILSRVQRFDFKRLTV 180 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 + I L E + I DE AE +G R L + Sbjct: 181 DQIRSRLRYICEQ-------EGIKATDEALDIFAEKADGSMRDGLTYFD 222 >UniRef50_Q0B0W5 DNA-directed DNA polymerase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0W5_SYNWW Length = 499 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 33/183 (18%) Query: 21 RPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANA--- 76 RP A+ +GQ+ + A L A+ G L H+ + GP GTGKT++A++IA+ N Sbjct: 11 RPRRFAEVVGQEKTVTA---LRNAVREGKLSHAYLFSGPRGTGKTSIAKIIAKAVNCENL 67 Query: 77 ---------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTILFVDE 114 DV I A ++ G+ EIR+ E+ R G+ + +DE Sbjct: 68 SEGEPCNQCSSCQDINNGNFMDVIEIDAASNRGIDEIRDLREKVRVLPAQGKNKVYIIDE 127 Query: 115 VHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQ 172 VH +A L IE+ + FI ATTE S ++ + + SR +VY + L+T +I + Sbjct: 128 VHMLTTEAFNALLKTIEEPPDAVIFILATTE--SHKIPATIRSRCQVYNFRRLTTAEITE 185 Query: 173 VLT 175 L+ Sbjct: 186 RLS 188 >UniRef50_A4CK17 DNA polymerase III subunit gamma/tau n=6 Tax=Bacteria RepID=A4CK17_9FLAO Length = 631 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYAN 75 A + RP+ +GQQ A + L AIE HL +++ GP G GKTT A ++A+ N Sbjct: 19 ARKYRPQQFEDVVGQQ---AITRTLLNAIENDHLAQALLFCGPRGVGKTTCARILAKKIN 75 Query: 76 AD-------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQ 122 D E +A + V +IR I++ R G+ + +DEVH +++ Sbjct: 76 EDGNQRDGEDFAFNIFELDAASNNSVDDIRNLIDQVRIPPQVGKYKVYIIDEVHMLSQAA 135 Query: 123 QDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +AFL +E+ FI ATTE ++ +LSR +++ + ++ D L E Sbjct: 136 FNAFLKTLEEPPRHAIFILATTEK--HKIIPTILSRCQIFDFRRITVGDAASYLKYIAEQ 193 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 Q I +E IA+ +G R AL+ + + A Sbjct: 194 -------QGIEADEEALHMIAQKADGAMRDALSIFDRVVSFA 228 >UniRef50_P38629 Replication factor C subunit 3 n=10 Tax=Saccharomycetales RepID=RFC3_YEAST Length = 340 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 22/237 (9%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR-- 72 P + RPE L + GQ ++ + + ++ G L ++ +GPPGTGKT+ +AR Sbjct: 14 PWVEKYRPETLDEVYGQNEVITTVR---KFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 70 Query: 73 ----YANADVERISAVTSGVKEIREAIE---RARQNRNAGRRTILFVDEVHRFNKSQQDA 125 Y+N +E ++ G+ +R I+ RQ + G + I+ DE + Q+A Sbjct: 71 YGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIIL-DEADAMTNAAQNA 129 Query: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY 185 IE T N + +L ALLSR + + L E IE+ + + Sbjct: 130 LRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVH----- 184 Query: 186 GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 + + L +A+ EL NGD RR LN L+ A +D+ + + +++ E G Sbjct: 185 --EKLKLSPNAEKALIELSNGDMRRVLNVLQSCK--ATLDNPDEDEISDDVIYECCG 237 >UniRef50_C1D5D8 DnaX n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5D8_LARHH Length = 769 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 33/195 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVI 70 ++Q LA + RP A +GQ+H++ A L A+ LH + +L G G GKTT+A ++ Sbjct: 2 SYQVLARKWRPRRFADLVGQEHVVRA---LSNALAGQRLHHAYLLTGTRGVGKTTIARIL 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A +G+ IRE IE A+ AG Sbjct: 59 AKSLNCERGVGAEPCGECAACRQIDAGRFVDLLEIDAASNTGIDNIREVIENAQYAPTAG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH +KS +A L +E+ + FI ATT+ + +LSR + L+ Sbjct: 119 RYKVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVT--VLSRCLQFALR 176 Query: 164 SLSTEDIEQVLTQAM 178 +++ + + L + Sbjct: 177 NMTPQQVSGHLAHVL 191 >UniRef50_D1C546 DNA polymerase III, subunits gamma and tau n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C546_SPHTD Length = 589 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 54/315 (17%) Query: 14 QPLAARMRPENLA--QYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 Q L + RP + A +++GQ+H+ + L AI + H+ + GP GTGKT+ A ++ Sbjct: 16 QSLYRKYRPRSFAPGEFVGQEHI---ARTLRNAIVLDRVAHAYLFCGPRGTGKTSTARLL 72 Query: 71 ARYANA-------------------------DVERISAVTS-GVKEIREAIERARQNRNA 104 A+ N D+ I A ++ GV +IR+ E+ + Sbjct: 73 AKAVNCLAPDPEARPCNACEACEAINAGTAVDIIEIDAASNRGVDDIRDLREKVKYAPTQ 132 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R +DE H+ + +AFL +E+ G + F+ ATTE +L + SR + + Sbjct: 133 LRVKFYIIDEAHQLTRDAFNAFLKTLEEPPGHVKFVLATTE--PDKLPDTIASRCQRFDF 190 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + D+ + L E + G + DE R IA G R AL LE +A Sbjct: 191 RRFALSDVVEHLRAVCERE--GMEAE-----DEALRLIARQATGSMRDALGLLEQLALFG 243 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E D GK V+ + + + G ++ DR L+ AL K G A L A Sbjct: 244 ETVD-GKLVITADAVRRVTGM------SRSDRLVALVDALAKKDAG----AGLRVIAEAT 292 Query: 283 TAGGDPLYVARRCLA 297 +G D + R+ +A Sbjct: 293 ESGEDIHQLNRQLVA 307 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 38/230 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++ L RP+ GQ+ ++ L AI+ + H+ + GP GTGKTT+A+++A Sbjct: 5 YKSLYRTYRPQTFKDVAGQEAIITT---LKHAIDEKKIAHAYLFCGPRGTGKTTVAKLLA 61 Query: 72 RYANA----------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRT 108 + N DV I A ++ GV+E+R I++ + G+ Sbjct: 62 KAVNCTGNPKPCGECENCKQIENGTHPDVIEIDAASNNGVEEVRSLIDKVKYAPTQGQYK 121 Query: 109 ILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DEVH + +A L +E+ + FI ATTE ++ ++SR + + L+ Sbjct: 122 VYIIDEVHMMSPGAFNALLKTLEEPPAHVIFILATTE--PHKILPTIISRCQRFDFTRLT 179 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 +++ Q + ++++ + Y D + IA L NG R AL+ LE Sbjct: 180 DQEMVQRMQYVLKEEGKTYD-------DGSLELIARLANGGMRDALSILE 222 >UniRef50_Q609A7 DNA polymerase III, gamma and tau subunits n=2 Tax=Gammaproteobacteria RepID=Q609A7_METCA Length = 547 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 33/198 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIA 71 +Q LA + RP N + +GQ+H++ K L A+EAG +H L+ G G GKTTLA ++A Sbjct: 3 YQALARKWRPHNFTEVVGQEHVV---KALTHALEAGRMHHAYLFTGTRGVGKTTLARILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A + V++ R+ ++ + N GR Sbjct: 60 KALNCEDRQGANPCGRCLICREVDEGRFIDLIEVDAASRTKVEDTRDLLDNVQYAPNQGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + F+ ATT+ + +LSR + LK Sbjct: 120 YKVYLIDEVHMLSGHSFNALLKTLEEPPPHVKFLLATTDPQKIPVT--VLSRCLQFNLKR 177 Query: 165 LSTEDIEQVLTQAMEDKT 182 L+ E I + Q + ++ Sbjct: 178 LTPEQIRAQMAQILASES 195 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 38/231 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 +++ L RP+ + GQ+H++ L AI+ + H+ + GP GTGKTT+A+++ Sbjct: 2 SYKALYRSYRPQTFGEVAGQEHIVTT---LKNAIKENRISHAYLFAGPRGTGKTTVAKLL 58 Query: 71 ARYANA----------------------DVERISAVTS-GVKEIREAIERARQNRNAGRR 107 A+ N DV I A ++ GV E+R+ I++ + G+ Sbjct: 59 AKALNCTGENPPCDQCPNCKAITVGEHPDVIEIDAASNNGVDEVRDLIDKVKYAPINGKY 118 Query: 108 TILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DEVH + +A L +E+ I F+ ATTE ++ ++SR + + K + Sbjct: 119 KVYIIDEVHMMSTGAFNALLKTLEEPPAHIVFVLATTE--PHKILPTIISRCQRFDFKKV 176 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 DI L ++ + + Y + ++A+L G R AL+ LE Sbjct: 177 ENHDIISRLEYVLKSENKKYELSAL-------ESVAKLAEGGMRDALSILE 220 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 33/191 (17%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIARYA 74 LA + RP+ A+ +GQ+H++ A L A+++G +H L+ G G GKTT+A + A+ Sbjct: 105 LARKWRPKRFAELVGQEHVVRA---LSNALDSGRVHHAFLFTGTRGVGKTTIARIFAKSL 161 Query: 75 NAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRTI 109 N + +E +A +GV ++RE IE A+ + G+ + Sbjct: 162 NCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKFKV 221 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH +K+ +A L +E+ + F+ ATT+ +L +LSR + LK L Sbjct: 222 YLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQ--KLPVTVLSRCLQFNLKRLDE 279 Query: 168 EDIEQVLTQAM 178 + I+ +T+ + Sbjct: 280 DQIQGQMTRIL 290 >UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSN6_CHIPD Length = 634 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 41/234 (17%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYAN 75 A + RP+N + +GQ H+ L AI L H+ + GP G GKTT A ++A+ N Sbjct: 8 ARKYRPQNFSTVVGQSHITTT---LKNAIRNSQLAHAFLFCGPRGVGKTTCARILAKTIN 64 Query: 76 AD--------VERISAVTS------------------GVKEIREAIERARQNRNAGRRTI 109 + + + TS V +IR +E+ R AG+ I Sbjct: 65 CENLQPDGEACNQCHSCTSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFAPQAGKYKI 124 Query: 110 LFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH + S +AFL +E+ FI ATTE ++ +LSR +++ K ++ Sbjct: 125 YIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTE--KHKILPTILSRCQIFDFKRITI 182 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 +D L + + I + +A+ +G R +L+TL+ + Sbjct: 183 QDTVDHLQEIC-------SKEHIQAETDALHLVAQKTDGCMRDSLSTLDKIVSF 229 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/312 (25%), Positives = 132/312 (42%), Gaps = 60/312 (19%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 D + L + RP + +GQ A + L AI AG + H+ + GP GTGKT+ A+ Sbjct: 27 DMAYIALYRQWRPGSFKDLVGQT---AVSRTLSHAISAGRIAHAYLFSGPRGTGKTSTAK 83 Query: 69 VIARYANA------------------------DVERISAVTS-GVKEIREAIERARQNRN 103 ++A+ N DV I A ++ G+ E+R+ E+ + Sbjct: 84 ILAKSLNCEKGPTPEPCGVCKNCTKIADGTALDVFEIDAASNRGIDEMRDLREKVKFTPA 143 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYL 161 GR + +DEVH +A L +E+ + FI ATTE ++ + + SR + + Sbjct: 144 EGRYKVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTE--PHKVPATIQSRCQRFD 201 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP--DETRRAIAELVNGDARRALNTLEMMA 219 + ++ E+IE L Y Q++ +P E R IA +G R AL+ L+ A Sbjct: 202 FRRITVEEIEARL---------AYVAQEMKIPCEKEALRLIARQADGGMRDALSLLDQCA 252 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 L + LT E +N G ++ I L K++ A L A Sbjct: 253 S-----------LDGDTLTAACVE-----ENLGLIGHEPIYRLTKAIGERAKGEVLETIA 296 Query: 280 RIITAGGDPLYV 291 ++ G DP+ + Sbjct: 297 ELLALGKDPMQL 308 >UniRef50_Q3J800 DNA-directed DNA polymerase n=2 Tax=Nitrosococcus oceani RepID=Q3J800_NITOC Length = 529 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 44/235 (18%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP + Q +GQ+H++ A L ++ G LH L+ G G GKTTLA ++ Sbjct: 2 SYQVLARKWRPRDFTQVVGQEHVVRA---LTNGLDKGRLHHAFLFTGTRGVGKTTLARIL 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N +E +A +GV + RE +E + G Sbjct: 59 AKSLNCKEGVRSTPCGKCQNCQAIDGGNFVDLIEVDAASRTGVDDTRELLENVHYAPSRG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 + +DEVH F+ S +A L +E+ I F+ ATTE +L +LSR + L+ Sbjct: 119 HYKVYLIDEVHMFSTSSFNALLKTLEEPPPHIKFLLATTEPK--KLPVTVLSRCLQFNLR 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDET--RRAIAELVNGDARRALNTLE 216 ++ + I + L +E + +P E+ IA G R AL+ L+ Sbjct: 177 RITPKAIAEHLNSILEAEE---------IPSESYALTLIARAAEGSVRDALSLLD 222 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 33/190 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F L + RP+N +GQ H++ + L A+E+G + H+ + GP GTGKT+ A+V A Sbjct: 3 FLSLYRKYRPQNFNDLVGQHHVV---RTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFA 59 Query: 72 RYANA------------------------DVERISAVTS-GVKEIREAIERARQNRNAGR 106 N DV I A ++ G+ EIRE E+ + N G Sbjct: 60 MALNCIHGPTTEPCGQCENCRKIQKGQSIDVIEIDAASNRGIDEIRELREKVKFYPNEGE 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH K +A L +E+ + FI ATTE P +N+ +LSR + + Sbjct: 120 YKVYIIDEVHMLTKGAFNALLKTLEEPPEKVVFILATTE-PHQVINT-ILSRCQRFDFSL 177 Query: 165 LSTEDIEQVL 174 L +I++ L Sbjct: 178 LPVREIQERL 187 >UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z8_ERYRH Length = 600 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 39/239 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 ++Q L + RP +L + +GQ+H++ L +I + H+ + GP GTGKT++A++ Sbjct: 2 SYQSLYRKYRPAHLDEVVGQEHVVNV---LKNSITKNKISHAYLFCGPRGTGKTSIAKLF 58 Query: 71 ARYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 AR N + +E +A +GV EIR IE+ + G+ Sbjct: 59 ARAVNCENPDQVICGTCDNCLAVADGTHPDLIEIDAASNNGVDEIRGLIEKVKYTPILGK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH ++ +A L +E+ + FI ATTE ++ ++SR + Y Sbjct: 119 YKVYIIDEVHMLSQGAFNALLKTLEEPPSHVVFILATTE--IHKVLPTIISRCQRYDFNR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + DI + L + +++ + IA L G R AL LE +A+ Sbjct: 177 IGEVDIAKRLDYVL-------NNENVEAEQGVSKLIASLSGGGLRNALTILEQAIVLAD 228 >UniRef50_A1AWB5 DNA polymerase III, subunits gamma and tau n=3 Tax=Gammaproteobacteria RepID=A1AWB5_RUTMC Length = 529 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 40/232 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIA 71 +Q LA + RP + + +GQ H K L A++A +LH L+ G G GKTT+A ++A Sbjct: 5 YQVLARKYRPHSFVKLVGQTH---TKKTLINALDANNLHHGFLFTGTRGVGKTTIARILA 61 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A +GV +R+ +E A+ + R Sbjct: 62 KSINCEQGISSKPCDKCATCVEIDKGQSIDLIELDAASHTGVDNMRDILENAQYMPSKNR 121 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH +K+ +A L +E+ + F+ TT+ P +L +LSR + L+ Sbjct: 122 YKIYLIDEVHMLSKNSFNALLKTLEEPPEHVKFLLVTTD-PQ-KLPVTVLSRCLQFTLQQ 179 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 L+ ++I + L M + Y + IA+ NG R AL+ L+ Sbjct: 180 LTHDEILEQLKFIMNAEVLSY-------EESALGQIADFGNGSMRDALSLLD 224 >UniRef50_B1VAI4 DNA polymerase III, gamma/tau subunit n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VAI4_PHYAS Length = 602 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 43/263 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 ++ L + RP+ +GQ+ ++ K R + H + + G GTGKTTLA++ A Sbjct: 4 SYLVLYRKYRPQTFQDVVGQKFIIQTLKNAIRYQKINHCY--LFSGNKGTGKTTLAKIFA 61 Query: 72 RYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 + N VE A +GV EIRE ++A+ + G+ Sbjct: 62 KVINCIYPQSGDVCNKCTSCLGSLQTNNDIVELDGASYNGVDEIREIQDKAQYKPHIGKN 121 Query: 108 TILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DEVH + +A L +E+ + FI TT+ ++ +LSRA+ + ++L Sbjct: 122 KVYIIDEVHVLTPNAFNALLKILEEPPKHVVFILITTQ--MHKIPETILSRAQSFSFENL 179 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 S E+I L + + IV+ D+ + IA G R AL+ L+ ++ Sbjct: 180 SLENIILQLKKIT-------NLEKIVITDDAIKDIANYSEGSMRNALSLLD------QIS 226 Query: 226 DSGKRVLKPELLTEIAGERSARF 248 ++ E + EI G S F Sbjct: 227 SYQNNLITSEDIAEIKGVVSGSF 249 >UniRef50_C0JZX8 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured bacterium URE4 RepID=C0JZX8_9BACT Length = 577 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 105/239 (43%), Gaps = 43/239 (17%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYAN 75 A + RP++ +GQ ++ + L +I+ G L H+ + GP G GKTT A + A+ N Sbjct: 8 ARKYRPDSFETLLGQDNI---ARTLSNSIKRGQLAHAYLFCGPRGVGKTTTARIFAKMIN 64 Query: 76 A-----DVERI---------------------SAVTSGVKEIREAIERARQNRNAGRRTI 109 D+E +A +GV +I+ IE+ + G+ ++ Sbjct: 65 CAHPGPDMEPCGECESCVSFQEGRSYCIHELDAASNNGVDDIKALIEQVQVPPQVGKYSV 124 Query: 110 LFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH ++S +AFL +E+ F+ ATTE ++ +LSR + Y + Sbjct: 125 YIIDEVHMLSQSAFNAFLKTLEEPPAHAIFVLATTEK--HKILPTILSRCQTYDFNRIGI 182 Query: 168 EDIEQVLTQAMEDKTRGYGGQD-IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 D+ + L RG ++ I + DE+ IA+ +G R AL + D Sbjct: 183 PDMVRNL--------RGIAAKEGITIDDESLHVIAQKADGAMRDALTIFDQTVAFCGTD 233 >UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJR0_FERNB Length = 517 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 40/234 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+N +GQ+H+ K L A++ + H+ I GP GTGKTT A ++A Sbjct: 1 MEALYRKYRPKNFYDIVGQEHI---KKLLTNALKLQKINHAYIFAGPRGTGKTTTARILA 57 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A G+ EIR+ E G+ Sbjct: 58 KSLNCEKNQFGEPCNECTSCQAIDNGSHLDVIELDAASNRGIDEIRKIKEGVNFTPVMGK 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ I FI ATT NP ++ ++SR V ++ Sbjct: 118 YKVYIIDEVHMLTREAFNALLKTLEEPPQHIVFILATT-NPE-KIPPTIMSRCHVLEFRN 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM 218 +S E+I L E + G D+ E + IA+ G R AL+TLE + Sbjct: 176 ISEENIISKLKSVCEKE-----GFDVTY--EALKKIAKRAEGGLRDALSTLEQV 222 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 38/232 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 ++ L + RP+ GQ+H++ K +A GH + + G GTGKTT+A++ A Sbjct: 2 SYTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAY--LFCGTRGTGKTTIAKIFA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A +GV IR+ E G+ Sbjct: 60 KAVNCEHPVDGSPCGECPACRAIAAGNSMNVIEIDAASNNGVDNIRQIREEVEYRPTEGK 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y + Sbjct: 120 YKVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDFRR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 +S E I L + ME + + + + R IA+ +G R AL+ L+ Sbjct: 178 ISIETISARLMELMEK-------EQVTVEERAIRYIAKAADGSMRDALSLLD 222 >UniRef50_D1J7N2 DNA polymerase III subunit gamma and tau n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7N2_MYCHP Length = 667 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 43/266 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 N + L + RP+ GQ H++ K + + H+ + GP G GKT+ A+V Sbjct: 5 NKYLALYRKYRPKIFDDIKGQDHIVITLKNI--ILNNKLSHAYLFCGPHGNGKTSTAKVF 62 Query: 71 ARYANA----------------------DVERISAVT-SGVKEIREAIERARQNRNAGRR 107 A N D+ I A + +G+ +IRE E+ + + Sbjct: 63 ANTINCLHNQSDILKPCEECIKNVDRNLDIIEIDAASNTGIDDIRELKEKIKHLPTQSKY 122 Query: 108 TILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSL 165 I +DEVH +K+ +A L IED I FI ATT+ P ++ +LSR + + K + Sbjct: 123 KIYIIDEVHMLSKAAFNALLKTIEDPPSHIIFILATTD-PQ-KIPETILSRVQRFNFKLM 180 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 + E L ++D + ++I D+ IA+L NG R +L+ + +A Sbjct: 181 TIE----TLVSQLKD---IFNKENIEYEDDAINVIAKLGNGSLRDSLSIADHVAIYC--- 230 Query: 226 DSGKRVLKPELLTEIAGERSARFDNK 251 +V+K E++ ++ G DNK Sbjct: 231 --ANKVIKKEVVEQLFG--IVNIDNK 252 >UniRef50_Q1YTB0 DNA polymerase III subunits gamma and tau n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTB0_9GAMM Length = 647 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 40/230 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP A+ GQQH+L A L A++ LH L+ G G GKTT+A ++ Sbjct: 2 SYQVLARKWRPRIFAEMAGQQHVLQA---LINALDHDRLHHAYLFTGTRGVGKTTIARIL 58 Query: 71 ARYANADV-------------------------ERISAVTSGVKEIREAIERARQNRNAG 105 ++ N +V E +A +GV ++RE ++ + + G Sbjct: 59 SKCLNCEVGVSSVPCGECSSCTEIGEGRFIDLIEVDAASRTGVDDMRELLDNVQYAPSRG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R I +DEVH +KS A L +E+ + F+ ATT+ + +LSR + LK Sbjct: 119 RYKIYLIDEVHMLSKSSFAALLKTLEEPPPHVKFLFATTDPQKLPIT--VLSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 +LS E I + L + G + + + ++A +G R AL+ Sbjct: 177 NLSAERITEHLQFVL-------GEEQVPFEEAALWSLARAADGSMRDALS 219 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/236 (29%), Positives = 102/236 (43%), Gaps = 40/236 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 T+ L RP + IGQ+H+ + L A+EAG + H+ I G GTGKTT A+V+ Sbjct: 2 TYLALYREWRPRTFGEIIGQEHIT---RTLKNAVEAGRVGHAYIFCGARGTGKTTAAKVL 58 Query: 71 ARYANA------------------------DVERISAVTS-GVKEIREAIERARQNRNAG 105 A+ N DV I A ++ G+ EIR+ E+ R AG Sbjct: 59 AKALNCTGREGAEPCNRCESCRAVNEGISVDVIEIDAASNRGIDEIRDLREKIRFAPAAG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH +A L +E+ I ATTE L +LSR + + + Sbjct: 119 RYRVYIIDEVHMLTSEAFNALLKTLEEPPRHAVLILATTEPHRVPLT--ILSRCQRFDFR 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + DI + L + G + + +E R IA G R AL+ L+ A Sbjct: 177 RIIPADIIKRLKEVA-------AGARLEVEEEALRLIARAAEGGLRDALSILDQAA 225 >UniRef50_A6LMU3 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMU3_THEM4 Length = 460 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 40/238 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ + +GQ H+ K +++ + H+ I GP GTGKTT+A ++A Sbjct: 1 METLYRKYRPKKFLELVGQSHV---KKLFVNSLKNKEISHAYIFAGPRGTGKTTVARILA 57 Query: 72 RYANA------------------------DVERISAVTS-GVKEIREAIERARQNRNAGR 106 + N DV + A ++ G+ EIR+ E + G+ Sbjct: 58 KSLNCENPQEIEPCNMCNACISIDKGNFMDVLELDAASNRGIDEIRKIRETVNYHTAQGK 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DE H K +A L +E+ + FI ATT NP ++ ++SR +V K+ Sbjct: 118 YKVYIIDEAHMLTKEAFNALLKTLEEPPSNVVFILATT-NPE-KIPQTIISRCQVIDFKN 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S +DI + L E+ + I + E I++ NG R AL LE + + A Sbjct: 176 ISNKDIIKRLEFVCEN-------EGIKISHEAIVEISKRANGGLRDALTILEQVINSA 226 >UniRef50_A6VMZ2 DNA polymerase III, subunits gamma and tau n=3 Tax=Pasteurellaceae RepID=A6VMZ2_ACTSZ Length = 699 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 37/197 (18%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP+N Q IGQ+H+L A L ++ LH L+ G G GKT++A ++ Sbjct: 2 SYQVLARKWRPQNFHQVIGQEHILTA---LANGLKENRLHHAYLFSGTRGVGKTSIARLL 58 Query: 71 ARYANA----------DVERISAVTSG---------------VKEIREAIERARQNRNAG 105 A+ N + E A+ +G V++ RE ++ + G Sbjct: 59 AKGLNCIHGVTAEPCGECEHCKAIENGNFIDLIEIDAASRTKVEDTRELLDNVQYKPVQG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH ++ +A L +E+ + F+ ATT+ + +LSR + LK Sbjct: 119 RYKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPI--TILSRCMQFHLK 176 Query: 164 SLSTEDIEQ----VLTQ 176 +LS + I Q +LTQ Sbjct: 177 ALSQQQIAQHLANILTQ 193 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 44/249 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP Q +GQ H+L A L A+ LH L+ G G GKT+LA + Sbjct: 2 SYQVLARKWRPAKFEQMVGQSHVLLA---LTNALSQQRLHHAYLFTGTRGVGKTSLARLF 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V + RE ++ + G Sbjct: 59 AKGLNCETGVTASPCGTCSSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYKPARG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH ++S +A L +E+ + F+ ATT +P +L +LSR + LK Sbjct: 119 RFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATT-DPQ-KLPVTVLSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 SLS ++I Q L + + + Q + L +A+ NG R AL+ + D A Sbjct: 177 SLSQDEISQQLEFILGQEQLPFESQALTL-------LAKAANGSMRDALS----LTDQAI 225 Query: 224 VDDSGKRVL 232 SG+ +L Sbjct: 226 AFGSGQVML 234 >UniRef50_A0M2F5 DNA polymerase III subunit gamma/tau n=20 Tax=Bacteroidetes RepID=A0M2F5_GRAFK Length = 653 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 28/213 (13%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYAN 75 A + RP+ +GQQ A L AI HL +++ GP G GKTT A ++A+ N Sbjct: 8 ARKYRPQTFKDVVGQQ---AITNTLANAINNNHLAQALLFTGPRGVGKTTCARILAKMIN 64 Query: 76 AD-------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQ 122 E +A + V +IR I++ R G + +DEVH + S Sbjct: 65 QKETQDPNEDFAFNIFELDAASNNSVDDIRNLIDQVRIPPQVGNYKVYIIDEVHMLSASA 124 Query: 123 QDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +AFL +E+ FI ATTE ++ +LSR +++ K ++ D + L E Sbjct: 125 FNAFLKTLEEPPKHAIFILATTE--KHKIIPTILSRCQIFDFKRITVTDAKNYLAHIAEQ 182 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 + G +D L IA+ +G R AL+ Sbjct: 183 E--GVNAEDDAL-----HIIAQKADGAMRDALS 208 >UniRef50_Q0C591 DNA polymerase III, subunits gamma and tau n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C591_HYPNA Length = 578 Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 91/368 (24%), Positives = 152/368 (41%), Gaps = 78/368 (21%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 T++ LA + RP IGQ+ ++ + L A E G + H +L G G GKTT A + Sbjct: 27 KTYEVLARKYRPRRFEDLIGQEAMV---RTLSNAFETGRIAHGFMLTGVRGVGKTTTARL 83 Query: 70 IARYAN------------------------------------ADVERISAVT-SGVKEIR 92 +AR N DV + A + +GV ++R Sbjct: 84 LARGLNYEPKADAKGKKGKAAGPSIHLDPPGEHCDAIMASRHPDVLELDAASRTGVADMR 143 Query: 93 EAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELN 150 + ++ AR + R + +DEVH + + +A L +E+ + FI ATTE + Sbjct: 144 DLLDSARYGPVSARYKVYIIDEVHMLSNASFNALLKTLEEPPPHLKFIFATTEIRKVPVT 203 Query: 151 SALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARR 210 +LSR + + LK L + ++ + L + + + + L IA G R Sbjct: 204 --VLSRCQRFDLKRLDSGELSRHLGNVAQSEGANVSEEALAL-------IARAAEGSVRD 254 Query: 211 ALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSA 270 L+ L+ + +++ E++G GDR L+ A+ K+V G A Sbjct: 255 GLSLLD------------QGIVQTTDGEEVSGAAVRAMLGLGDRAR-LLDAVEKAVGGDA 301 Query: 271 PDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEG- 329 AL + G DP + + L IA++ + VA A D +T+ GPA+ Sbjct: 302 -KGALAEVREQVAGGADPAVILKDILDIAAD---------ISVAQATGDDWTQAGPADWA 351 Query: 330 --ERAIAQ 335 RA+AQ Sbjct: 352 NRTRALAQ 359 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 83/315 (26%), Positives = 140/315 (44%), Gaps = 56/315 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP Q +GQ H+L A L A+ LH L+ G G GKT+LA + Sbjct: 2 SYQVLARKWRPAKFEQMVGQSHVLHA---LTNALTQQRLHHAYLFSGTRGVGKTSLARLF 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V + RE ++ + + G Sbjct: 59 AKGLNCEQGVTATPCGQCSACVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH ++S +A L +E+ + F+ ATT +P L +LSR + LK Sbjct: 119 RYKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATT-DPQ-RLPVTVLSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 SL+ ++I LT + ++ + + L +A+ NG R AL+ + D A Sbjct: 177 SLTQDEISDQLTNVLTAESLEFEATALTL-------LAKAANGSMRDALS----LTDQAI 225 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 +G+ +K EL+ + G D K + L+ AL K+ A + A +++ Sbjct: 226 AFGAGQ--VKLELVQTMLG----SIDEK--QVIALLEALAKADVM----ALMQVSAGVLS 273 Query: 284 AGGDPLYVARRCLAI 298 G +P V R L + Sbjct: 274 FGAEPEEVLRSLLEL 288 >UniRef50_C6MGX6 DNA polymerase III, subunits gamma and tau n=2 Tax=Betaproteobacteria RepID=C6MGX6_9PROT Length = 537 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 37/195 (18%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVIAR 72 Q LA + RP N + GQ+H++ A L A+E LH + +L G G GKTT+A ++A+ Sbjct: 5 QVLARKWRPRNFTELTGQEHVVRA---LTNALEQNRLHHAYLLTGTRGVGKTTIARILAK 61 Query: 73 YANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 N + VE +A + V +RE +E A GR Sbjct: 62 SLNCETGITATPCGTCTTCVQIDSGSFIDLVELDAASNTQVDNMRELLENALYAPTCGRY 121 Query: 108 TILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSL 165 I +DEVH +KS +A L +E+ + FI ATT+ + +LSR + LK + Sbjct: 122 KIYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDQQKIPIT--VLSRCLQFNLKQI 179 Query: 166 S----TEDIEQVLTQ 176 T+ ++++L Q Sbjct: 180 PQPQITDHLKKILAQ 194 >UniRef50_A3WNZ0 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina baltica OS145 RepID=A3WNZ0_9GAMM Length = 640 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 44/245 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIA 71 +Q LA + RP Q +GQQH+L +PL A+E LH L+ G G GKTT+A ++A Sbjct: 3 YQVLARKWRPMQFDQVVGQQHVL---EPLFHALEQQRLHHAYLFTGTRGVGKTTIARILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A + V++ RE ++ + GR Sbjct: 60 KALNCERGVSARPCGECPSCEEIEQGRFVDLIEVDAASRTKVEDTRELLDNVQYRPTRGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH ++ +A L +E+ + F+ ATT +P +L ++SR + L++ Sbjct: 120 YKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATT-DPQ-KLPVTVVSRCLQFNLRA 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L E I L +E++ + Q + L +A+ G R AL+ + D A Sbjct: 178 LDREQIVGQLEYVLENENVPHDAQALTL-------LAQSAKGSMRDALS----LTDQAIA 226 Query: 225 DDSGK 229 GK Sbjct: 227 QGQGK 231 >UniRef50_C4L8U6 DNA polymerase III, subunits gamma and tau n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L8U6_TOLAT Length = 760 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 33/201 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIA 71 +Q LA + RP N + +GQQH+L A L A++ G LH L+ G G GKTT+A ++A Sbjct: 3 YQVLARKWRPRNFHEVMGQQHVLQA---LSNALDQGRLHHAYLFSGTRGVGKTTIARILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A + V++ R+ ++ + GR Sbjct: 60 KCLNCETGITSRPCGQCSACREIDQGNFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH ++ +A L +E+ + F+ ATT+ +L +LSR + LK+ Sbjct: 120 FKIYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTILSRCLQFHLKA 177 Query: 165 LSTEDIEQVLTQAMEDKTRGY 185 L+ E I + L + ++ + Y Sbjct: 178 LTREQIVEQLQRVLQAEQLTY 198 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 38/231 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + L + RP+ GQ+H++ K +A GH + + G GTGKTT+A+++AR Sbjct: 3 YTALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAY--LFCGTRGTGKTTIAKILAR 60 Query: 73 YANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 N + +E +A +GV IRE E G+ Sbjct: 61 AVNCEHPVDGSPCNTCKTCRAINEGTSMNVIEIDAASNNGVDNIREIREEVAYRPTTGKY 120 Query: 108 TILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y + + Sbjct: 121 KVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDFRRI 178 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 + + I L + M+ + G D+ ++ R IA+ +G R AL+ L+ Sbjct: 179 TADTIAARLQELMDKE-----GNDV--EEKAIRYIAKAADGSMRDALSLLD 222 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 40/241 (16%) Query: 19 RMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANA- 76 R RPE A +GQ+H+ + L RA+ +G + H+ + GP GTGKT+ A+++AR N Sbjct: 9 RWRPERFADLVGQEHI---SRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILARALNCA 65 Query: 77 -----------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTILFV 112 DV I A ++ G+ EIR+ E + G I + Sbjct: 66 EGPTLTPCGHCDSCRSISDGSSMDVFEIDAASNRGIDEIRDLRESVKFAPTEGLYKIYII 125 Query: 113 DEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDI 170 DEVH +A L +E+ + FI ATTE ++ + + SR + Y ++ +I Sbjct: 126 DEVHMLTTEAFNALLKTLEEPPERVIFILATTE--PHKVPATIQSRCQRYDFHRITVTEI 183 Query: 171 EQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR 230 L K G ++ L IA +G R AL+ L+ +AE + +R Sbjct: 184 CDRLIYVC--KESGIEAEEDAL-----GIIAVQADGGMRDALSILDQCTALAEGTLTAER 236 Query: 231 V 231 V Sbjct: 237 V 237 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 39/231 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++ L RP + + GQ+H++ K L A+E + H+ + GP GTGKT++A++ A Sbjct: 9 YKALYRTYRPNSFDEVAGQKHIV---KTLQNAVEQNKIAHAYLFCGPRGTGKTSIAKIFA 65 Query: 72 RYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 + N + +E +A +GV+E+R IE+ + G+ Sbjct: 66 KVINCESKEHKPCLQCDNCLAVQNGSHPDIIEIDAASNNGVEEVRNLIEKVKYAPLKGKY 125 Query: 108 TILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DEVH + +A L IE+ + FI ATTE ++ ++SR + + + Sbjct: 126 KVYIIDEVHMMSAGAFNALLKTIEEPPEHVIFILATTE--PHKVLPTIISRCQRFDFTKV 183 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 +I + +E + I D+ IA+L +G R AL+ L+ Sbjct: 184 PKNEIVSRIHTILE-------KEHIECDDDVIELIAQLADGGLRDALSILD 227 >UniRef50_D1AJH2 DNA polymerase III, subunits gamma and tau n=2 Tax=Fusobacteriaceae RepID=D1AJH2_SEBTE Length = 496 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 41/233 (17%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYA 74 L + RP+N + GQ H++ A + +++ L H+ + GP G GKTT+A +IA+ Sbjct: 5 LYRKYRPQNFEEIAGQGHIVKA---IRNSLKENKLSHAYLFNGPRGVGKTTIARLIAKGV 61 Query: 75 NA-------------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRT 108 N D+ I A ++ G+ EIRE E+ G + Sbjct: 62 NCLTNGISDHPCGTCDNCREIAAGISMDMVEIDAASNRGIDEIRELKEKINYQPVNGNKK 121 Query: 109 ILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DEVH K +A L +E+ + FI ATTE ++ ++SR + Y L+ Sbjct: 122 VYIIDEVHMLTKEAFNALLKTLEEPPSHVIFILATTEVD--KIPDTVISRCQRYDFLPLN 179 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 DI ++L E ++I + +E+ + I G AR + + E +A Sbjct: 180 MNDIIEMLKMVAEK-------ENIKIDEESLKLIYRKSEGSARDSFSIFEQVA 225 >UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 Tax=Firmicutes RepID=D1BPK5_VEIPT Length = 895 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 46/252 (18%) Query: 19 RMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANA- 76 + RP+ +GQ + L RAI + H+ + GP GTGKT++A++ AR N Sbjct: 9 KYRPQTFTDVVGQHQV---SDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFARAINCE 65 Query: 77 -----------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTILFV 112 DV I A ++ G+ E+R E + GR+ + + Sbjct: 66 HGPTDHPCNECSACRSILSGQSMDVLEIDAASNRGIDEVRALRESVKFMPVEGRKKVFII 125 Query: 113 DEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDI 170 DE H +A L IE+ + FI ATTE +L ++SR + Y + ++++DI Sbjct: 126 DEAHMLTTEAWNALLKTIEEPPAHVMFIFATTE--IEKLPVTIVSRCQRYTFRRITSDDI 183 Query: 171 EQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR 230 Q L+ E + G+ L + IA +G R AL+ L+ A MA +G Sbjct: 184 AQRLSYVAEKE--GFD-----LDSAAAQLIAVHADGGLRDALSILDQCAGMA----TGS- 231 Query: 231 VLKPELLTEIAG 242 + P+++ E+ G Sbjct: 232 -ITPQVVEELIG 242 >UniRef50_C5CHM0 DNA polymerase III, subunits gamma and tau n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHM0_KOSOT Length = 503 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 39/230 (16%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIAR 72 + L + RP+ + +GQ + L +AIE + H+ I +GP GTGKTT A ++A+ Sbjct: 6 EVLYRKYRPKKFEEIVGQDQVKIV---LKKAIENQSIAHAYIFFGPRGTGKTTTARILAK 62 Query: 73 YANA-----------------------DVERISAVT-SGVKEIREAIERARQNRNAGRRT 108 N DV I A + G+ EIR+ + A G Sbjct: 63 ALNCLSHDDKPCGKCESCIAVDNNSHMDVIEIDAASYRGIDEIRKIRDAASYRPTMGHYK 122 Query: 109 ILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + VDE H + +A L +E+ I FI ATT ++ +LSR +V+ K LS Sbjct: 123 VYIVDEFHMLTREAFNALLKTLEEPPEHIVFILATTNLE--KVPETILSRCQVFTFKPLS 180 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 I + L + ++++ + Y E + IA+ G R A+N LE Sbjct: 181 EGQIVEYLQRILKEEKKTYTV-------EALKIIAKAAKGGMRDAVNLLE 223 >UniRef50_Q2NK09 DNA polymerase III, gamma/tau subunit n=3 Tax=Candidatus Phytoplasma asteris RepID=Q2NK09_AYWBP Length = 653 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 37/230 (16%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR--- 72 L + RP+ A +GQ+ ++ K R + H + + G GTGKTTLA++ A+ Sbjct: 6 LYRKYRPQTFADVVGQEIIIQTLKNAIRYQKINHCY--LFSGNKGTGKTTLAKIFAKAIN 63 Query: 73 --------------------YANADVERISAVT-SGVKEIREAIERARQNRNAGRRTILF 111 AN D+ I + +GV EIRE ++A+ +AG+ + Sbjct: 64 CLSPIQGEAFCSCHFCQNFAKANTDITEIDGASYNGVDEIRELQDKAQYKAHAGKYKVYI 123 Query: 112 VDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTED 169 +DEVH + +A L +E+ + FI TTE +++ + SR++ + ++L+ ++ Sbjct: 124 IDEVHVLTPNAFNALLKILEEPPEHVVFILITTE--IYKIPDTIFSRSQSFAFENLNLKN 181 Query: 170 IEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 I LT+ +++ + ++ ++IA G R AL+ L+ ++ Sbjct: 182 ITAQLTKIA-------ALENMFITEDAIKSIAYHSEGGMRNALSLLDQVS 224 >UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W8W3_ATOPD Length = 755 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 47/269 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLA---- 67 + L + RP+ Q +GQ+H++ L RA+ L H+ + GP GTGKTT+A Sbjct: 1 MESLYTKYRPQTFEQVVGQKHVVGT---LKRAVLEQKLSHAYLFCGPRGTGKTTMARLLA 57 Query: 68 --------------------EVIARYANADVERISAVT-SGVKEIR-EAIERARQNRNAG 105 ++IA + DV I A + +GV +R E I RA G Sbjct: 58 KAILCHEAPGHLPDGTCEDCQLIAAGQHPDVFEIDAASNTGVDNVREEIISRASYAPVCG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ +TFI TT+ ++ + +LSR + + + Sbjct: 118 KGKVYIIDEVHMLTSAAFNALLKTLEEPPSHVTFIMCTTD--PQKILATILSRVQRFDFR 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 S++ +++ + L K G+ +D + I G R AL++LE ++ Sbjct: 176 SIAADEMAEHLISVC--KNEGFTYEDAAI-----DLIVRYARGGMRDALSSLEQLSVY-- 226 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKG 252 G V+ + + ++ G+ S N Sbjct: 227 ----GGGVISEQTVRDVLGQSSGSLINSA 251 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 38/232 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 ++Q L + RP+ GQ+H++ K +A GH + + G GTGKTT+A++ A Sbjct: 2 SYQALYRKFRPQEFEDVKGQEHIVTTLKNQIKADRIGHAY--LFCGTRGTGKTTVAKIFA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A +GV IR+ E GR Sbjct: 60 KAVNCEHPVDGSPCGECPSCRAITEGSSMNVIEIDAASNNGVDNIRQIREEVTYRPTEGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y Sbjct: 120 YKVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDFHR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 +S + I L+ ME + + + + R +A+ +G R AL+ L+ Sbjct: 178 ISIDTIASRLSDLMEQ-------EHVEVEERAIRYVAKAGDGSMRDALSLLD 222 >UniRef50_D0JBQ2 DNA polymerase III subunit gamma/tau n=1 Tax=Blattabacterium sp. (Blattella germanica) str. Bge RepID=D0JBQ2_BLASB Length = 501 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 86/179 (48%), Gaps = 26/179 (14%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTL 66 FSD LA + +P + IGQ+++ L +AI+ L + +GP G GK T Sbjct: 5 FSDKI--VLADKYKPLKWDELIGQENI---SITLKKAIQENRLSQVLFFFGPKGVGKNTC 59 Query: 67 AEVIARYANA--DVERISAVT--------SGVKEIREAIERARQNRNAGRRTILFVDEVH 116 A ++A N+ + + IS T + +K I I+ +R + G+ I + E+H Sbjct: 60 AHILANELNSFSEFKDISLNTFEINGFFHNSLKCIHRIIDTSRYSPKRGKYNIFIIKEIH 119 Query: 117 RFNKSQQDAFLPHIEDG--TITFIGATTEN---PSFELNSALLSRARVYLLKSLSTEDI 170 +F+K D FL IE+ I FI TE P F +LSR +VY +SLS + I Sbjct: 120 KFSKDVFDFFLKFIEEKHPHILFIFCGTEEKIVPEF-----ILSRCQVYEFQSLSVKKI 173 >UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0B1_9SPHI Length = 575 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 41/235 (17%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYAN 75 A + RP +GQ H+ L AI++ L + + GP G GKTT A ++A+ N Sbjct: 8 ARKYRPATFDTVVGQSHITTT---LKNAIKSNQLAQAFLFCGPRGVGKTTCARILAKTIN 64 Query: 76 A-----DVERI---------------------SAVTSGVKEIREAIERARQNRNAGRRTI 109 D E +A ++ V +IR +++ R +G+R + Sbjct: 65 CLTPTEDFEACGTCESCVSFQNQGSMNVYELDAASSNSVDDIRNLVDQVRYPPQSGKRKV 124 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH + S +AFL +E+ + FI ATTE ++ +LSR +++ K + Sbjct: 125 YIIDEVHMLSNSAFNAFLKTLEEPPEYVIFILATTE--KHKIIPTILSRCQIFDFKRIEV 182 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +D+ L + ++I + IA+ +G R AL+ +++ + Sbjct: 183 KDMSGHLANIAQ-------KEEIEAEQDALDLIAQKADGGLRDALSLFDLITTFS 230 >UniRef50_Q31I98 DNA polymerase III, tau subunit n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31I98_THICR Length = 696 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 42/230 (18%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIARYA 74 LA + RP+N ++ +GQ H++ A L A++ LH L+ G G GKTT+A + ++ Sbjct: 6 LARKWRPKNFSELVGQTHVMQA---LSNALDQQRLHHAYLFTGTRGVGKTTIARIFSKAL 62 Query: 75 NAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRTI 109 N + +E +A + V++ RE +E + GR + Sbjct: 63 NCEQGITSKPCGVCSTCRSIDEGRFVDLIEVDAASKTKVEDTRELLENVQYAPVQGRYKV 122 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH +KS +A L +E+ + F+ ATT+ +L +LSR + L L+ Sbjct: 123 YLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTD--PHKLPITVLSRCLQFNLMRLTL 180 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRA-IAELVNGDARRALNTLE 216 I+Q L ++ Q+ V +ET A IA+ +G AR +L+ L+ Sbjct: 181 PQIQQHLAYILQ--------QEQVTFEETALAMIAKSADGSARDSLSILD 222 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 43/258 (16%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYA 74 LA + RP+ + + Q H+ K AI + H++ L GP GTGKTT+A ++A+ Sbjct: 6 LARKYRPQTFDEVVAQPHITETLK---NAINQERVAHALCLSGPRGTGKTTVARILAKAM 62 Query: 75 NA------------------------DVERIS-AVTSGVKEIREAIERARQNRNAGRRTI 109 N DV I A + V+++RE E + G + Sbjct: 63 NCVNGPTPEPCGVCASCKEIAASNAVDVFEIDGASNNSVEQVRELRENVQYAPALGNYKV 122 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH +++ +A L +E+ + FI ATTE S ++ +LSR + Y K +S Sbjct: 123 YIIDEVHMLSQAAFNALLKTLEEPPPHVMFILATTE--SHKIPVTILSRCQRYDFKRISL 180 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS 227 +DI L + G ++ + +++ A+A G R AL+ L+ + + + S Sbjct: 181 DDIVGHLAKLA-------GLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYSTGEAS 233 Query: 228 GKRVLKPELLTEIAGERS 245 ++VL + +AG +S Sbjct: 234 FEKVLD---ILGVAGRKS 248 >UniRef50_A8GRW7 Holliday junction ATP-dependent DNA helicase ruvB n=25 Tax=Proteobacteria RepID=RUVB_RICRS Length = 342 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 37/229 (16%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEA--GHLHSMILWGPPGTGKTTLAEVIARYANAD 77 +RP L +++GQQ + +A ++ HL + +GPPG GKTTLA++I+ + Sbjct: 18 IRPSYLQEFVGQQQIKENLSVFIKAAKSRNEHLDHTLFYGPPGLGKTTLAKIISNEIGGN 77 Query: 78 VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI-- 135 + TSG I + + A N + +LF+DE+HR N + ++ P +ED + Sbjct: 78 FKS----TSG-PAILKVADLAAILTNLEKNDVLFIDEIHRLNTAVEEVLYPAMEDFELDI 132 Query: 136 ------------------TFIGATTENPSFELNSALLSRARVYL-LKSLSTEDIEQVLTQ 176 T IGATT L++ L R + + L +TE++++VL + Sbjct: 133 IIGEGSAARSVKITLPKFTLIGATTRLGL--LSNPLRDRFGIPMRLNFYNTEELKKVLNR 190 Query: 177 AMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 A + DI L D IA+ G R AL L + D A V+ Sbjct: 191 ASK-------LLDIDLTDSGSEEIAKRSRGTPRIALRLLRRIRDFAAVE 232 >UniRef50_C2MCK6 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteroidales RepID=C2MCK6_9PORP Length = 429 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 42/245 (17%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTL 66 SDN F A + RP+ + +GQ+ + L AI+ G + H+ + GP G GKT+ Sbjct: 1 MSDN-FIVSARKYRPQTFDEMLGQEAICLT---LKSAIQQGKIAHAYLFCGPRGVGKTSA 56 Query: 67 AEVIARYANAD--------------------------VERISAVTSGVKEIREAIERARQ 100 A ++AR N + E +A + V +IR E Sbjct: 57 ARILARTINCEQLTPQGEACGVCANCQAALHQRAFNIYELDAASNNSVDDIRRLNEDVYI 116 Query: 101 NRNAGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRAR 158 G+ + +DEVH + +AFL +E+ G + FI ATTE ++ +LSR + Sbjct: 117 RPQQGKYKVYIIDEVHMLSSGAFNAFLKTLEEPPGYVVFILATTEKD--KVLPTILSRCQ 174 Query: 159 VYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM 218 VY K + E I + L + + + Y + IA + +G R AL+ + + Sbjct: 175 VYDFKPIPPEQIAEQLRRVADAEGLQYDPRSF-------DTIARIADGGMRDALSLFDRL 227 Query: 219 ADMAE 223 A A+ Sbjct: 228 ASTAQ 232 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 40/230 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP + + +GQ H+L A L A+++ LH L+ G G GKTT+A +I Sbjct: 2 SYQVLARKWRPRSFREMVGQAHVLKA---LINALDSQRLHHAYLFTGTRGVGKTTIARII 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V++ RE ++ + + G Sbjct: 59 AKCLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH + +A L +E+ + FI ATT+ +L + +LSR + LK Sbjct: 119 RFKVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTD--PQKLPATILSRCLQFSLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 +++ E + + LT + G +++ D+ + +G R A++ Sbjct: 177 NMTPERVVEHLTHVL-------GVENVPFEDDALWLLGRAADGSMRDAMS 219 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 40/227 (17%) Query: 21 RPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANA--- 76 RP+ +GQ+H++ + L AI + H+ + GP GTGKTT A+V+A+ N Sbjct: 11 RPQTFQDMVGQRHII---QTLQNAIREDRVSHAYLFNGPRGTGKTTAAKVLAKAVNCERG 67 Query: 77 ---------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTILFVDE 114 DV I A ++ G+ EIR+ ++ R + R + +DE Sbjct: 68 PAEEPCNECDACRGITAGHIMDVIEIDAASNRGIDEIRDIRDKVRYAPSEVRYKVYIIDE 127 Query: 115 VHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQ 172 VH +A L +E+ G + FI ATTE +L + ++SR + + + +S E+ + Sbjct: 128 VHMLTSEAFNALLKTLEEPPGHVIFILATTE--PHKLPATIISRCQRFDFRQVSLEEQSE 185 Query: 173 VLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 L + D + I ++ IA L G R A++ LE +A Sbjct: 186 RLFEICRD-------EGIEAEEDAIAYIARLSEGGMRDAISLLEQVA 225 >UniRef50_B0TVX0 DNA-directed DNA polymerase n=20 Tax=Francisella RepID=B0TVX0_FRAP2 Length = 551 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 40/233 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP++ ++ GQQH L + L A+E +H L+ G G GKTTL ++ Sbjct: 2 SYQALARKYRPQSFSEVAGQQHALNS---LVHALETQKVHHAYLFTGTRGVGKTTLGRLL 58 Query: 71 ARYANA------------------------DVERISAVT-SGVKEIREAIERARQNRNAG 105 A+ N D+ I A + +GV+E +E ++ + + G Sbjct: 59 AKCLNCKTGVTAEPCNKCENCLAINNNSFIDLIEIDAASRTGVEETKEILDNIQYMPSQG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH +K +A L +E+ + FI ATT+ + +LSR LK Sbjct: 119 RYKVYLIDEVHMLSKQSFNALLKTLEEPPEYVKFILATTDYHKIPV--TILSRCIQLHLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 +S DI+ L + ++I +++ IA G R AL+ L+ Sbjct: 177 HISQSDIKDQLKVVL-------NKENISSDEQSLDYIAYHAKGSLRDALSLLD 222 >UniRef50_A4SMN2 DNA polymerase III, subunits gamma and tau n=2 Tax=Aeromonas RepID=A4SMN2_AERS4 Length = 865 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 33/202 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH-SMILWGPPGTGKTTLAEVI 70 ++Q LA + RP Q +GQ H+L A L A++ G LH + +L G G GKTT+A ++ Sbjct: 2 SYQVLARKWRPHTFEQVVGQHHVLTA---LTNALDQGRLHHAYLLSGTRGVGKTTIARIL 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V++ RE ++ + G Sbjct: 59 AKSLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH ++ +A L +E+ + F+ ATT+ + +LSR + LK Sbjct: 119 RFKVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPIT--ILSRCLQFHLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGY 185 SL I + L ++ + + + Sbjct: 177 SLDQTQIAKQLECVLDQEAQPF 198 >UniRef50_B9CMB1 DNA polymerase III subunit gamma/tau n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CMB1_9ACTN Length = 723 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 41/236 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ Q +GQ+H++ L RA+ G + H+ + GP GTGKTT+A ++A Sbjct: 1 MESLYTKYRPQTFEQVVGQKHVVGT---LKRAVLEGKVSHAYLFCGPRGTGKTTMARLLA 57 Query: 72 RYA------------------------NADVERISAVT-SGVKEIR-EAIERARQNRNAG 105 + + DV I A + +GV +R E I RA G Sbjct: 58 KALLCRKAPGQLPDGTCEECQLIAAGNHPDVVEIDAASNTGVDNVREEIISRANYAPVRG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ +TFI TT +P L + +LSR + + Sbjct: 118 KGKVYIIDEVHMLTTAAFNALLKTLEEPPAHVTFILCTT-DPQKVLGT-VLSRVQRFDFH 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 ++ E++ L Q E ++ Y + + L I G R AL +LE ++ Sbjct: 176 AIGNEEMLSHLQQVCEAESFQYDARALEL-------IVRHARGGMRDALTSLEQLS 224 >UniRef50_C8WB95 DNA polymerase III, subunits gamma and tau n=4 Tax=Zymomonas mobilis RepID=C8WB95_ZYMMN Length = 628 Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 77/315 (24%), Positives = 134/315 (42%), Gaps = 64/315 (20%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++ LA + RP+ + IGQ ++ + L AI L H+ +L G G GKT+ A +IA Sbjct: 11 YRVLARKYRPQKFSDLIGQDAMV---RTLGNAIARDRLAHAFLLTGVRGVGKTSTARLIA 67 Query: 72 RYANA------------------------------DVERISAVTSGVKEIREAIERARQN 101 + N VE +A +GV +IR+ +E R Sbjct: 68 KALNCVGKDGHGGMTIDPCGECEACRAIAEGRHIDVVEMDAASHTGVDDIRDIVESVRYA 127 Query: 102 RNAGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARV 159 + R + +DEVH +KS +A L +E+ + F+ ATTE + +LSR + Sbjct: 128 SVSARFKVYIIDEVHMLSKSAFNALLKTLEEPPAHVKFLFATTEINKVPIT--VLSRCQR 185 Query: 160 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE--- 216 + L+ +ST + ++ ++ + + +E IA+ G R L+ L+ Sbjct: 186 FDLRRISTATLTDYFSKVVQ-------LEQVEAEEEALAMIAKAAEGSVRDGLSILDQAI 238 Query: 217 -------MMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGS 269 + AD+ E+ R + LL ++ + KGDR D + A + G Sbjct: 239 AHSSGSILAADVREMLGLSDRGVIKSLLVDL-------LEGKGDRVLDHVKAQYD--LGV 289 Query: 270 APDAALYWYARIITA 284 P+A L+ ++I A Sbjct: 290 EPEALLHGLLQLIHA 304 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 34/197 (17%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYA 74 LA + RP+ +GQQH++ + L AI + H+ + GP G GKT++A ++A+ Sbjct: 6 LARKWRPQVFEDVVGQQHVV---QTLKNAIRQERIAHAFLFSGPRGVGKTSIARILAKAI 62 Query: 75 NA------------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTI 109 N DV I ++ G+ EIRE ER R + R + Sbjct: 63 NCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVSCRYKV 122 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLST 167 +DEVH + +A L +E+ + FI ATTE + ++ + +LSR + + + LS Sbjct: 123 YIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTE--THKVPATILSRCQCFEFRRLSL 180 Query: 168 EDI-EQVLTQAMEDKTR 183 I EQ+ A +K R Sbjct: 181 RQIAEQLRKIAETEKIR 197 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 41/234 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP+N + GQ+H+ + L AIE+G LH L+ G G GKTT+A ++ Sbjct: 2 SYQVLARKWRPKNFDELQGQEHV---SRALVNAIESGRLHHAYLFTGTRGVGKTTIARIL 58 Query: 71 ARYANADVERISAVTSG--------------------------VKEIREAIERARQNRNA 104 ++ N + +++ G V + RE +E + Sbjct: 59 SKCLNCETNGLTSKPCGECGSCVEIDEGRFVDLIEVDAASRTKVDDTRELLENVQYKPTR 118 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + S +A L +E+ + F+ ATT +P +L +LSR + L Sbjct: 119 GRYKVYLIDEVHMLSNSSFNALLKTLEEPPEHVIFLLATT-DPQ-KLPVTVLSRCLQFHL 176 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 K + + I + L ++ ++ + + L I+ G R AL+ L+ Sbjct: 177 KHMEEQTISKHLAYILQQESIDFETPALEL-------ISRSAEGSMRDALSLLD 223 >UniRef50_UPI0000E0E6B7 DNA polymerase III subunits gamma and tau n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E6B7 Length = 834 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 33/195 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP ++ +GQ+H++ A + A++ LH L+ G G GKTT+A + Sbjct: 2 SYQVLARKWRPNKFSELVGQEHVVTA---ISNALDNNRLHHAYLFTGTRGVGKTTIARIF 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N D +E +A + V + RE ++ + G Sbjct: 59 AKSLNCDTGLSANPCGECGTCRDIEQGRFVDLLEIDAASRTKVDDTRELLDNVQYRPTQG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 + +DEVH +K +A L +E+ + F+ ATT +P +L +LSR + LK Sbjct: 119 DYKVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATT-DPQ-KLPVTILSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAM 178 +LS E I+Q L+ + Sbjct: 177 ALSREQIQQQLSHVL 191 >UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASK9_MARMM Length = 606 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 89/330 (26%), Positives = 137/330 (41%), Gaps = 59/330 (17%) Query: 1 MSNLSLDFSDNT--FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWG 57 M L L + T +Q LA + RP+ IGQ ++ + L A AG + H+ +L G Sbjct: 18 MPGLDLPATGPTPGYQVLARKYRPDTFEDLIGQDAMV---RTLTNAFAAGRIAHAYMLTG 74 Query: 58 PPGTGKTTLAEVIARYANADVERISAVT-----------------------------SGV 88 G GKTT A +IAR N + I A + +GV Sbjct: 75 VRGVGKTTTARLIARALNFQTDGIDAPSMALGEKGRHCDAIGRSAHVDVMEMDAASRTGV 134 Query: 89 KEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPS 146 +IRE +E R + R + +DEVH + S +A L +E+ FI ATTE Sbjct: 135 GDIREILEGVRYAPVSARYKVYIIDEVHMLSTSAFNALLKTLEEPPEHAKFIFATTEIRK 194 Query: 147 FELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNG 206 + +LSR + + LK + E VLT + D+ G G + + IA G Sbjct: 195 VPVT--VLSRCQRFDLKRIDRE----VLTDHL-DRICGLEGASV--ERDGLSLIARAAEG 245 Query: 207 DARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSV 266 R AL+ L+ + + D V P++ + AR ++ L +++ Sbjct: 246 SVRDALSLLDQA--IVQGSDEDGPVSAPQIRDMLGLADHAR----------VLDLLEQTL 293 Query: 267 RGSAPDAALYWYARIITAGGDPLYVARRCL 296 G D AL + + AGGDP+ + R L Sbjct: 294 TGKTAD-ALAELSSLHDAGGDPVVITRDLL 322 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 40/230 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP Q +GQ H+L A L A+ LH L+ G G GKT+LA + Sbjct: 2 SYQVLARKWRPATFEQVVGQSHVLHA---LTNALSQNRLHHAYLFTGTRGVGKTSLARLF 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V + RE ++ + G Sbjct: 59 AKGLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH ++S +A L +E+ + F+ ATT +P L +LSR + LK Sbjct: 119 RFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATT-DPQ-RLPVTVLSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 SL+ ++I L + + GY D + +A+ NG R AL+ Sbjct: 177 SLTLDEICVQLGHILAQEQVGYD-------DGAVKLLAKAANGSMRDALS 219 >UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQ74_ACIBL Length = 632 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 81/315 (25%), Positives = 137/315 (43%), Gaps = 58/315 (18%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 ++Q LA + RP+ ++ IGQ H+ + L AIE + H I G G GKTT+A ++ Sbjct: 2 SYQVLARKYRPQKFSEVIGQDHVT---RTLKNAIEQQRIAHGYIFSGHRGIGKTTIARIL 58 Query: 71 ARYANA--------------------------DVERISAVTS-GVKEIREAIERARQNRN 103 A N DV I A T+ G+ EIRE E AR Sbjct: 59 AMALNCQSADHPVSEPCGVCDSCKEVKAGQSVDVIEIDAATNRGIDEIRELREAARYRPA 118 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYL 161 R I +DE H+ + +A L +E+ G I F+ ATTE ++ + SR + + Sbjct: 119 RDRFKIYILDEAHQITDAAFNALLKTLEEPPGHIVFMMATTE--PEDIPQTIRSRCQHFS 176 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 ++ +DI VL G G +D L +AE +G R AL+ ++ Sbjct: 177 FHAVKFDDI--VLQLRDIAGKEGIGAEDDAL-----AMLAEAGDGSMRDALSIMDQA--- 226 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 + G + LK + + + G S+ D D+++ +H ++ ++ L ++ Sbjct: 227 --IAACGNQ-LKTDDVRGLMGTVSS------DVLEDIMNGVH----ANSSESVLTTIDKL 273 Query: 282 ITAGGDPLYVARRCL 296 + G PL+ A++ + Sbjct: 274 LIEGHSPLHFAKQAV 288 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 87/339 (25%), Positives = 148/339 (43%), Gaps = 65/339 (19%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 T+Q LA + RP++ + +GQ+H+L A L A++ LH L+ G G GKTT+A ++ Sbjct: 2 TYQVLARKWRPKSFGEMVGQEHVLQA---LINALDHDRLHHAYLFTGTRGVGKTTIARIL 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V++ RE +E + Sbjct: 59 AKCLNCEQGVSSHPCGECGSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVQYAPTRS 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH + S +A L +E+ + F+ ATT+ +L + +LSR + LK Sbjct: 119 RYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTD--PQKLPATVLSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE------------TRRAIA----ELVNGD 207 ++ E I L +E + + + L T +AIA +L+ D Sbjct: 177 NMPPEQIVGHLANVLEHEMVSFEEPALWLLGRAASGSMRDALSLTDQAIAFGSGKLIETD 236 Query: 208 ARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG---ERSARFDNKGDRFYDLISALHK 264 R L ++++ ++ G P L I G E + F+ D +LIS +H+ Sbjct: 237 VRSMLGSVDLSFVYQLLE--GVAAGDPAELLAIVGRMAEHAPDFEGSTD---ELISMVHR 291 Query: 265 -SVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 +V + PDA I + GD VA +I +ED Sbjct: 292 VAVAQAVPDA-------IDNSWGDADRVAALAQSIGAED 323 >UniRef50_C6XEE5 DNA polymerase III, subunits gamma and tau n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEE5_METSD Length = 610 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 40/233 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP+ +GQ+H++ A L A+E LH L+ G G GKTTLA ++ Sbjct: 2 SYQVLARKWRPKLFEALVGQEHVVRA---LTNALEQQRLHHAYLFTGTRGVGKTTLARIL 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V +RE ++ A+ G Sbjct: 59 AKSLNCETGITAHPCGVCSACVDIDRGRFVDMLEVDAASNTQVDSMRELLDNAQYAPTVG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH ++S +A L +E+ + FI ATT+ + +LSR + L+ Sbjct: 119 RFKVYIIDEVHMLSRSAFNAMLKTLEEPPAHVKFILATTDPQKMPVT--VLSRCLQFNLR 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 +ST I L + + + I L + I+ NG R AL+ L+ Sbjct: 177 QMSTPAITSHLQEVLAKE--NIPSDSIAL-----QLISRAANGSMRDALSLLD 222 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 42/230 (18%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP+ + +GQ H+ A L A+ LH L+ G G GKTT+A + Sbjct: 2 SYQVLARKWRPQTFHELVGQSHVKQA---LVNALTQNRLHHAYLFTGTRGVGKTTIARIF 58 Query: 71 ARYANADVERISAVTSG--------------------------VKEIREAIERARQNRNA 104 A+ N D E ISA G V++ RE ++ + Sbjct: 59 AKSLNCD-EGISANPCGQCSSCKDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +K +A L +E+ + F+ ATT+ P +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTD-PQ-KLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRAL 212 +LS +I+ L + + + D+ R IA+ +G R AL Sbjct: 176 NALSQSEIKTQLEHVLTHEKLNFD-------DDALRIIAKAADGSMRDAL 218 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 52/264 (19%) Query: 51 HSMILWGPPGTGKTTLAEVIARYANA------------------------DVERISAVTS 86 H+ I GP GTGKT++A+++A+ N D+ I A ++ Sbjct: 39 HAYIFSGPRGTGKTSVAKIVAKALNCLEAPAKEPCGKCDVCLGVDRGDVPDIIEIDAASN 98 Query: 87 -GVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTE 143 GV EIR+ ++ + + G+ + +DEVH + +A L +E+ + FI ATTE Sbjct: 99 NGVDEIRDLRDKVKYAPSIGKYKVYIIDEVHMLTTAAFNALLKTLEEPPKYVVFILATTE 158 Query: 144 NPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAEL 203 ++ + +LSR + + K++ + IE+ L Q + +++ + E AIA Sbjct: 159 --PHKVPATILSRCQRFDFKNIEMDQIEENLKQII-------NKENLKITPEALTAIART 209 Query: 204 VNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALH 263 G R AL+ L+ + + + + ++ T ++G S R+ I+ L Sbjct: 210 AEGGMRDALSLLDQVVSF-----TNDEITEEDIYT-VSGGLSRRY----------INELL 253 Query: 264 KSVRGSAPDAALYWYARIITAGGD 287 K + P AL +II G D Sbjct: 254 KVIYLKQPQKALDLLNQIIKDGKD 277 >UniRef50_Q15RT3 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RT3_PSEA6 Length = 914 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 33/191 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP N ++ +GQ+H++AA + A++ LH L+ G G GKTT+A + Sbjct: 2 SYQVLARKWRPNNFSELVGQEHVVAA---ISNALDNDRLHHAYLFTGTRGVGKTTIARIF 58 Query: 71 ARYANA------------------------DVERISAVT-SGVKEIREAIERARQNRNAG 105 ++ N D+ I A + + V++ RE ++ + + G Sbjct: 59 SKSLNCELGMGSKPCGKCSTCVEIEQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPSRG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH +K +A L +E+ + F+ ATT+ + +LSR + LK Sbjct: 119 RYKVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPI--TILSRCLQFNLK 176 Query: 164 SLSTEDIEQVL 174 +LS I Q L Sbjct: 177 ALSRAQIAQQL 187 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 40/233 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAG-HLHSMILWGPPGTGKTTLAEVI 70 +Q L RP++ +GQ+H+ K L AI G H+ I GP GTGKT++A+V Sbjct: 2 NYQALYRMFRPQSFQDVVGQEHV---TKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVF 58 Query: 71 ARY------------------------ANADVERISAVTS-GVKEIREAIERARQNRNAG 105 A+ N DV I A ++ GV EIR ++ + + Sbjct: 59 AKAINCLNPQDGEPCNECAICKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSES 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH +A L +E+ FI ATTE ++ ++SRA+ + K Sbjct: 119 KYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTE--PHKIPPTIISRAQRFDFK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 ++ TE I L E++ Y +E IA+ G R AL+ ++ Sbjct: 177 AIGTEQITDRLRFVAEEQQLDYD-------NEALEFIAKASEGGMRDALSIMD 222 >UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C334AE Length = 726 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 76/311 (24%), Positives = 140/311 (45%), Gaps = 59/311 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ +GQ+ ++ L AI + + H+ + GP GTGKT+ A + A Sbjct: 4 YEPLYQKYRPQTFDGLVGQKSIVLT---LSNAIRSQRISHAYLFTGPRGTGKTSTARIFA 60 Query: 72 RYANA--------------------------DVERISAVT-SGVKEIREAIERARQNRNA 104 + N DV I A + +GV IRE IE+A+ Sbjct: 61 KSINCLASDAPSISPCGNCEACQTINKGSSLDVIEIDAASNTGVDNIREIIEQAKFAPMQ 120 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R I VDE H + + +A L +E+ + FI ATT+ P L ++SR + + Sbjct: 121 LRYKIYIVDECHMLSTAAFNALLKILEEPPKHVIFILATTD-PQRVL-PTIISRCQRFDY 178 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ E+I Q L + ++ ++I + + +A++ NG R A + L+ ++ Sbjct: 179 RRIAIEEIVQHLGKIAKE-------ENINIEIDALNLVAKISNGGLRDAESLLDQLSLF- 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 +GK + E + ++ G S R DL+S L ++R + + + ++I Sbjct: 231 ----TGK--INSEKVNDLVGLISER---------DLLSLLQ-AIRSNNSKLIIEFCGQLI 274 Query: 283 TAGGDPLYVAR 293 G +PL + + Sbjct: 275 NKGKEPLTILQ 285 >UniRef50_A1S561 DNA-directed DNA polymerase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S561_SHEAM Length = 909 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 33/202 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVI 70 ++Q LA + RP N A+ +GQ H+L A L A+ LH L+ G G GKT+LA + Sbjct: 2 SYQVLARKWRPANFAEVVGQSHVLHA---LTNALGQQRLHHAYLFTGTRGVGKTSLARLF 58 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N + +E +A + V + RE ++ + + G Sbjct: 59 AKGLNCEQGITATPCGQCSACREIAEGRFVDLIEVDAASRTKVDDTREILDNVQYRPSRG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH +KS +A L +E+ + F+ ATT+ +L +LSR + LK Sbjct: 119 RFKVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGY 185 +L+ I+ L + + G+ Sbjct: 177 ALTQPQIQAQLAAVLSGEGLGF 198 >UniRef50_C8V679 Subunit of heteropentameric Replication factor (Eurofung) n=18 Tax=Saccharomyceta RepID=C8V679_EMENI Length = 398 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 32/235 (13%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 ++L ++ DN P + RP L G + +LA + R +EA L ++L+GPPGT Sbjct: 35 ADLPVEAQDNL--PWVEKYRPNTLDDVSGHKDILAT---INRFVEANQLPHLLLYGPPGT 89 Query: 62 GKTTLAEVIAR--YANADVERI-----SAVTSGVKEIREAIERARQNRN--------AGR 106 GKT+ +AR Y + ++ ++ ++ G+ +RE I+ + G+ Sbjct: 90 GKTSTILALARRIYGSKNMRQMVLELNASDDRGIDVVREQIKTFASTKQIFSMAPSATGK 149 Query: 107 RT-----ILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYL 161 + ++ +DE + Q A +E T N + +L+ ALLSR + Sbjct: 150 SSLASFKLIILDEADAMTSTAQMALRRIMEKYTANTRFCIIANYTHKLSPALLSRCTRFR 209 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLE 216 L +DI ++ Q +E +D+ + E ++ L GD RRALN L+ Sbjct: 210 FSPLKEQDIRVLIDQVIEK-------EDVRIQPEAVDSLVTLSRGDMRRALNVLQ 257 >UniRef50_Q1G919 DNA polymerase III, gamma/tau subunit n=26 Tax=Lactobacillus RepID=Q1G919_LACDA Length = 607 Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 40/234 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP +GQ+ A L ++ G + H+ + GP GTGKT+ A++ A Sbjct: 3 YQALYRKWRPRTFDDVVGQE---AITDTLKNSLIRGKVSHAFLFAGPRGTGKTSCAKIFA 59 Query: 72 RYAN------------------AD-------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N AD +E +A + V EIR+ +++ G+ Sbjct: 60 KALNCLNLQEGEPCNECSNCLAADQGAMPDIIEMDAASNNSVDEIRDLLDKVHYAPTEGK 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + S +A L +E+ ++ FI ATTE ++ + ++SR + Y K Sbjct: 120 YKVYIIDEVHMLSISAFNALLKTLEEPPASVVFILATTELQ--KVPATIISRTQRYNFKR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM 218 S E + Q ME G + + D+ + IA++ +G R AL+ L+ + Sbjct: 178 FSNE----AMVQRME---YILGQEGVEYEDKALKVIAQVADGGMRDALSILDQL 224 >UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 Tax=Ammonifex degensii KC4 RepID=C9RAG1_AMMDK Length = 427 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 40/231 (17%) Query: 21 RPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANA--- 76 RP+ AQ +GQ H+ + L A+ G + H+ + GP GTGKT+ A ++A+ N Sbjct: 12 RPQQFAQVVGQAHV---TRTLRNALAMGRIAHAYLFAGPRGTGKTSTARILAKALNCLQG 68 Query: 77 ---------------------DVERISAVTS-GVKEIREAIERARQNRNAGRRTILFVDE 114 DV I A + G+ E+RE ER R + R + +DE Sbjct: 69 PTPVPCDTCPQCLSIMEGTSLDVLEIDAASRRGIDEMRELRERVRLSPVHSRYKVYIIDE 128 Query: 115 VHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQ 172 H +A L +E+ + FI ATTE ++ +LSR + + + L T IE+ Sbjct: 129 AHMLTSEAANALLKTLEEPPPQVVFILATTE--PHKIPVTILSRCQRFDFRRLPTALIEE 186 Query: 173 VLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 L + E + + E R +A+ G R AL+ L+ AE Sbjct: 187 HLARVAETFP-------VKVEREALRLLAQAAEGSMRDALSLLDQALAWAE 230 >UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIX1_HAHCH Length = 735 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 35/196 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILW-GPPGTGKTTLAEVIA 71 +Q LA + RP N A+ GQ+H+L A L A+ LH L+ G G GKTT+A + A Sbjct: 3 YQVLARKWRPGNFAEMAGQEHVLKA---LTNALNQDRLHHAYLFTGTRGVGKTTVARIFA 59 Query: 72 RYANADVERISAVTSG--------------------------VKEIREAIERARQNRNAG 105 + N + + +SA+ G V+++RE ++ + Sbjct: 60 KCLNCE-QGVSAIPCGECGVCREIAEGRFVDLIEIDAASRTKVEDMRELLDNVQYAPTRS 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R I +DEVH + S +A L +E+ + F+ ATT+ +L +LSR + LK Sbjct: 119 RYKIYLIDEVHMLSNSSFNALLKTLEEPPPHVKFLLATTD--PQKLPVTILSRCLQFNLK 176 Query: 164 SLSTEDIEQVLTQAME 179 +LS + I LT ++ Sbjct: 177 NLSPQRIVSHLTHVLQ 192 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAZ6 Replication-associated recombination protein A n... 670 0.0 UniRef50_C6C7V1 AAA ATPase central domain protein n=14 Tax=Prote... 643 0.0 UniRef50_Q3AA20 ATPase, AAA family n=34 Tax=Bacteria RepID=Q3AA2... 586 e-166 UniRef50_Q2LUH3 ATPase, AAA family n=27 Tax=Bacteria RepID=Q2LUH... 569 e-161 UniRef50_Q74BH4 ATPase, AAA family n=3 Tax=Bacteria RepID=Q74BH4... 566 e-160 UniRef50_B5Y9V9 AAA ATPase, central region n=80 Tax=Bacteria Rep... 559 e-158 UniRef50_C4KSW2 Recombination factor protein RarA n=89 Tax=Bacte... 555 e-156 UniRef50_Q480Q0 ATPase, AAA family n=114 Tax=Gammaproteobacteria... 548 e-154 UniRef50_A3DD23 Recombination protein MgsA n=8 Tax=Bacteria RepI... 547 e-154 UniRef50_Q3B4X4 Recombination protein MgsA n=36 Tax=Bacteria Rep... 545 e-153 UniRef50_A8ZU04 AAA ATPase central domain protein n=5 Tax=Bacter... 536 e-151 UniRef50_C8R0G7 AAA ATPase central domain protein n=3 Tax=Bacter... 534 e-150 UniRef50_B0RT44 ATPase n=6 Tax=Xanthomonas RepID=B0RT44_XANCB 533 e-150 UniRef50_B0CAJ0 ATPase, AAA family protein n=50 Tax=Bacteria Rep... 532 e-149 UniRef50_C0BGA7 AAA ATPase central domain protein n=4 Tax=Bacter... 532 e-149 UniRef50_C9KPY4 Replication-associated recombination protein A n... 529 e-149 UniRef50_Q3A5K5 ATPase, AAA family n=9 Tax=Bacteria RepID=Q3A5K5... 527 e-148 UniRef50_C6X3K0 ATPase, AAA family n=21 Tax=Bacteria RepID=C6X3K... 523 e-147 UniRef50_A5FMX8 AAA ATPase, central domain protein n=9 Tax=Bacte... 519 e-146 UniRef50_B8DZZ0 AAA ATPase central domain protein n=1 Tax=Dictyo... 517 e-145 UniRef50_B3E131 ATPase n=1 Tax=Methylacidiphilum infernorum V4 R... 515 e-145 UniRef50_D2LJI0 AAA ATPase central domain protein n=1 Tax=Rhodom... 515 e-144 UniRef50_B8DU13 AAA ATPase, central domain protein n=49 Tax=Bact... 513 e-144 UniRef50_D0LV62 AAA ATPase central domain protein n=6 Tax=cellul... 511 e-143 UniRef50_C6NSC7 ATPase, AAA family n=1 Tax=Acidithiobacillus cal... 510 e-143 UniRef50_C8WQ98 AAA ATPase central domain protein n=2 Tax=Alicyc... 509 e-142 UniRef50_O48696 F3I6.23 protein n=4 Tax=Embryophyta RepID=O48696... 508 e-142 UniRef50_UPI0001C42F86 recombination factor protein RarA n=1 Tax... 506 e-142 UniRef50_Q6MPI4 ATPase, AAA family n=1 Tax=Bdellovibrio bacterio... 504 e-141 UniRef50_O13984 ATPase WRNIP1 homolog C26H5.02c n=1 Tax=Schizosa... 502 e-140 UniRef50_D1BNC9 AAA ATPase central domain protein n=4 Tax=Veillo... 501 e-140 UniRef50_C0X719 Crossover junction endodeoxyribonuclease n=29 Ta... 501 e-140 UniRef50_A7NI76 AAA ATPase central domain protein n=22 Tax=Bacte... 499 e-140 UniRef50_B9HZJ7 Predicted protein n=3 Tax=rosids RepID=B9HZJ7_POPTR 498 e-139 UniRef50_D0N7J3 ATPase WRNIP1 n=1 Tax=Phytophthora infestans T30... 498 e-139 UniRef50_Q1QXX6 Recombination protein MgsA n=9 Tax=Bacteria RepI... 496 e-139 UniRef50_A5WC21 Recombination protein MgsA n=9 Tax=Bacteria RepI... 495 e-138 UniRef50_Q2J818 Recombination protein MgsA n=12 Tax=Bacteria Rep... 494 e-138 UniRef50_C8W9U5 AAA ATPase central domain protein n=2 Tax=Atopob... 493 e-138 UniRef50_O34528 Uncharacterized AAA domain-containing protein yr... 493 e-138 UniRef50_C6D7W1 AAA ATPase central domain protein n=2 Tax=Bacill... 493 e-138 UniRef50_B6HVW8 Pc22g06370 protein n=36 Tax=cellular organisms R... 493 e-138 UniRef50_UPI000192574D PREDICTED: similar to Werner helicase int... 492 e-137 UniRef50_C8WLQ0 AAA ATPase central domain protein n=3 Tax=Coriob... 492 e-137 UniRef50_Q96S55 ATPase WRNIP1 n=37 Tax=Metazoa RepID=WRIP1_HUMAN 492 e-137 UniRef50_A4E6Q7 Putative uncharacterized protein n=3 Tax=Collins... 489 e-137 UniRef50_C0R1V7 Holliday junction resolvase helicase subunit-lik... 489 e-137 UniRef50_Q75JU2 ATPase WRNIP1 n=2 Tax=Eukaryota RepID=WRIP1_DICDI 489 e-136 UniRef50_C6IZU9 AAA ATPase central domain-containing protein n=1... 488 e-136 UniRef50_A6QR70 Werner helicase interacting protein 1 n=6 Tax=Am... 488 e-136 UniRef50_C5RHF7 AAA ATPase central domain protein n=11 Tax=Bacte... 488 e-136 UniRef50_A5GNS9 ATPase related to the helicase subunit of the Ho... 488 e-136 UniRef50_Q1D8G6 ATPase, AAA family n=1 Tax=Myxococcus xanthus DK... 487 e-136 UniRef50_Q0EY57 ATPase n=1 Tax=Mariprofundus ferrooxydans PV-1 R... 486 e-136 UniRef50_B5JJN9 ATPase, AAA family protein n=2 Tax=Verrucomicrob... 484 e-135 UniRef50_Q47N55 Recombination protein MgsA n=6 Tax=Bacteria RepI... 484 e-135 UniRef50_B2KBM0 AAA ATPase central domain protein n=2 Tax=Elusim... 483 e-135 UniRef50_D2RB58 Recombination factor protein RarA n=2 Tax=Gardne... 482 e-134 UniRef50_Q17P00 Werner helicase interacting protein n=3 Tax=Endo... 482 e-134 UniRef50_B1ZVQ2 AAA ATPase central domain protein n=10 Tax=Bacte... 482 e-134 UniRef50_B2W7D9 DNA-dependent ATPase MGS1 n=2 Tax=Leotiomyceta R... 479 e-133 UniRef50_D2AWQ0 Recombination factor protein RarA n=3 Tax=Bacter... 478 e-133 UniRef50_C8XD35 AAA ATPase central domain protein n=21 Tax=Actin... 476 e-133 UniRef50_C4R299 Protein with DNA-dependent ATPase and ssDNA anne... 475 e-132 UniRef50_Q50739 Uncharacterized AAA domain-containing protein Rv... 475 e-132 UniRef50_A5V4N3 Recombination protein MgsA n=171 Tax=Bacteria Re... 470 e-131 UniRef50_Q6BHR7 DEHA2G16302p n=8 Tax=Saccharomycetales RepID=Q6B... 470 e-131 UniRef50_Q6A8J0 Uncharacterized ATPase related to the helicase s... 468 e-130 UniRef50_Q9WYX8 UPF0189 protein TM_0508 n=15 Tax=cellular organi... 467 e-130 UniRef50_C6BV47 AAA ATPase central domain protein n=12 Tax=Desul... 467 e-130 UniRef50_A1SJC4 Recombination protein MgsA n=2 Tax=Actinobacteri... 466 e-130 UniRef50_A9U314 Predicted protein n=1 Tax=Physcomitrella patens ... 466 e-130 UniRef50_C5MFE6 Putative uncharacterized protein n=1 Tax=Candida... 466 e-130 UniRef50_UPI0000D57862 PREDICTED: similar to werner helicase int... 465 e-129 UniRef50_C4Y1S6 Putative uncharacterized protein n=1 Tax=Clavisp... 465 e-129 UniRef50_C7LWR1 AAA ATPase central domain protein n=3 Tax=Desulf... 463 e-129 UniRef50_C9M5W8 Replication-associated recombination protein A n... 462 e-129 UniRef50_A6DHI5 ATPase, AAA family protein n=1 Tax=Lentisphaera ... 459 e-127 UniRef50_Q8RGJ6 ATPase associated with chromosome architecture/r... 458 e-127 UniRef50_B6K1T7 DNA-dependent ATPase MGS1 n=1 Tax=Schizosaccharo... 455 e-126 UniRef50_B1HUL5 Putative uncharacterized protein n=4 Tax=cellula... 454 e-126 UniRef50_Q4P896 Putative uncharacterized protein n=2 Tax=Ustilag... 453 e-126 UniRef50_Q04QW6 Holliday junction resolvase helicase subunit-lik... 452 e-125 UniRef50_A0Q7R7 AAA family-ATPase n=19 Tax=Francisella RepID=A0Q... 451 e-125 UniRef50_C7NB61 AAA ATPase central domain protein n=12 Tax=Fusob... 451 e-125 UniRef50_A5V6U8 Recombination protein MgsA n=1 Tax=Sphingomonas ... 450 e-125 UniRef50_P40151 DNA-dependent ATPase MGS1 n=12 Tax=Saccharomycet... 448 e-124 UniRef50_A5DW03 Putative uncharacterized protein n=1 Tax=Loddero... 446 e-124 UniRef50_B1KXC3 ATPase, AAA family n=17 Tax=Clostridium RepID=B1... 446 e-124 UniRef50_B2THM3 ATPase, AAA family n=25 Tax=Clostridiaceae RepID... 443 e-123 UniRef50_A4EPD3 ATPase n=3 Tax=Rhodobacteraceae RepID=A4EPD3_9RHOB 439 e-122 UniRef50_C5NXY2 Replication-associated recombination protein A n... 437 e-121 UniRef50_UPI00016B2545 recombination factor protein RarA n=3 Tax... 437 e-121 UniRef50_A6LJD0 AAA ATPase, central domain protein n=3 Tax=Therm... 436 e-121 UniRef50_D1B930 AAA ATPase central domain protein n=2 Tax=Synerg... 426 e-117 UniRef50_UPI00015B415D PREDICTED: similar to werner helicase int... 425 e-117 UniRef50_C6HUJ9 AAA ATPase n=1 Tax=Leptospirillum ferrodiazotrop... 421 e-116 UniRef50_UPI0001C3744E recombination factor protein RarA n=1 Tax... 417 e-115 UniRef50_A9BGH8 AAA ATPase central domain protein n=1 Tax=Petrot... 414 e-114 UniRef50_D1B0W0 AAA ATPase central domain protein n=5 Tax=Campyl... 413 e-114 UniRef50_UPI0000DB7733 PREDICTED: similar to Werner helicase int... 409 e-112 UniRef50_C7H148 ATPase, AAA family n=1 Tax=Eubacterium saphenum ... 408 e-112 UniRef50_A0RRQ8 ATPase, AAA family n=3 Tax=Campylobacter RepID=A... 407 e-112 UniRef50_B3PM47 ATPase, related to the helicase subunit of the H... 403 e-111 UniRef50_A7ZAZ1 ATPase, AAA family protein n=45 Tax=Epsilonprote... 402 e-110 UniRef50_UPI0000E4A039 PREDICTED: hypothetical protein n=2 Tax=S... 396 e-108 UniRef50_A9NGG4 Holliday junction DNA helicase-like ATPase n=1 T... 396 e-108 UniRef50_B1AII3 ATPase, AAA family n=14 Tax=Ureaplasma RepID=B1A... 394 e-108 UniRef50_C1SKW4 AAA ATPase n=1 Tax=Denitrovibrio acetiphilus DSM... 393 e-108 UniRef50_Q2NJI8 ATPase, AAA family n=7 Tax=Mollicutes RepID=Q2NJ... 391 e-107 UniRef50_D1J7Q3 ATPase, AAA family n=1 Tax=Mycoplasma hominis AT... 390 e-107 UniRef50_C2HPK6 Crossover junction endodeoxyribonuclease ATPase ... 382 e-104 UniRef50_A3ERK9 Probable ATPase, AAA family n=2 Tax=Leptospirill... 378 e-103 UniRef50_Q043K3 Helicase subunit of the Holliday junction resolv... 378 e-103 UniRef50_A5IXK5 ATPase, AAA family n=2 Tax=Mycoplasma RepID=A5IX... 376 e-102 UniRef50_UPI000192678D PREDICTED: similar to Werner helicase int... 375 e-102 UniRef50_C5K6M1 Werner helicase interacting protein, putative n=... 373 e-102 UniRef50_B0EGY1 ATPase WRNIP1, putative n=2 Tax=Entamoeba RepID=... 370 e-101 UniRef50_A2QW62 Function: WHIP of M. musculus is involved in agi... 369 e-100 UniRef50_Q7NAV9 Predicted ATP/GTPase n=1 Tax=Mycoplasma gallisep... 364 3e-99 UniRef50_Q8EWR1 Predicted ATPase n=1 Tax=Mycoplasma penetrans Re... 359 1e-97 UniRef50_A8BYS0 ATPase, AAA family n=2 Tax=Giardia intestinalis ... 349 8e-95 UniRef50_Q6KHC7 ATPase n=3 Tax=Mycoplasma RepID=Q6KHC7_MYCMO 347 4e-94 UniRef50_Q5KCD2 Helicase, putative n=2 Tax=Filobasidiella neofor... 344 4e-93 UniRef50_Q4SLJ4 Chromosome 15 SCAF14556, whole genome shotgun se... 344 4e-93 UniRef50_B7PTW3 Werner helicase interacting protein, putative (F... 328 3e-88 UniRef50_C7M3A0 AAA ATPase central domain protein n=1 Tax=Acidim... 318 3e-85 UniRef50_C4LVU1 AAA family ATPase, putative n=2 Tax=Entamoeba Re... 312 2e-83 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 296 1e-78 UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Ta... 290 6e-77 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 287 8e-76 UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus Rep... 285 3e-75 UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Ba... 280 8e-74 UniRef50_A6BBM0 ATPase, AAA family (Fragment) n=1 Tax=Vibrio par... 280 8e-74 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 280 1e-73 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 279 1e-73 UniRef50_B8LS10 Putative uncharacterized protein n=1 Tax=Picea s... 279 2e-73 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 279 2e-73 UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candida... 279 2e-73 UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79... 279 2e-73 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 278 4e-73 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 277 4e-73 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 277 4e-73 UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Ta... 277 5e-73 UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Ba... 277 5e-73 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 277 6e-73 UniRef50_B2GIA8 Putative uncharacterized protein n=2 Tax=Bacteri... 277 7e-73 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 277 8e-73 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 276 1e-72 UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1... 276 1e-72 UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 T... 275 3e-72 UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 T... 274 6e-72 UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Ta... 274 7e-72 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 274 7e-72 UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subuni... 274 7e-72 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 273 1e-71 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 273 1e-71 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 272 1e-71 UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 T... 272 2e-71 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 272 2e-71 UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 T... 272 2e-71 UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Ba... 272 2e-71 UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bactero... 272 2e-71 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 272 2e-71 UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 T... 272 2e-71 UniRef50_C5NYK0 DNA polymerase III subunit gamma/tau n=1 Tax=Gem... 272 2e-71 UniRef50_C7M8P5 DNA polymerase III, subunits gamma and tau n=1 T... 271 3e-71 UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clo... 271 4e-71 UniRef50_D1VIN0 AAA ATPase central domain protein n=1 Tax=Franki... 271 4e-71 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 271 4e-71 UniRef50_Q3B0U5 DNA polymerase III, tau subunit n=14 Tax=Cyanoba... 271 4e-71 UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobac... 270 7e-71 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 270 7e-71 UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 270 8e-71 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 270 1e-70 UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 T... 269 1e-70 UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 T... 269 1e-70 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 269 2e-70 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 269 2e-70 UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 ... 269 2e-70 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 269 2e-70 UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Ba... 269 2e-70 UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bac... 269 2e-70 UniRef50_D1C546 DNA polymerase III, subunits gamma and tau n=1 T... 268 2e-70 UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clo... 268 3e-70 UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 T... 268 3e-70 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 268 3e-70 UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaul... 268 4e-70 UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Sl... 267 4e-70 UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 T... 267 4e-70 UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 T... 267 4e-70 UniRef50_A9BDA2 DNA polymerase, gamma and tau subunits n=2 Tax=c... 267 5e-70 UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Mic... 267 5e-70 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 267 6e-70 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 267 8e-70 UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 T... 267 8e-70 UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Ta... 267 9e-70 UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 T... 266 9e-70 UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Ba... 266 1e-69 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 266 1e-69 UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 T... 265 2e-69 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 265 2e-69 UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 T... 265 2e-69 UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W... 265 2e-69 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 265 3e-69 UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 T... 265 3e-69 UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 T... 265 3e-69 UniRef50_C2GHX2 Crossover junction endodeoxyribonuclease n=4 Tax... 265 3e-69 UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA ... 265 3e-69 UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 T... 265 3e-69 UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 T... 264 4e-69 UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 T... 264 4e-69 UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 T... 264 5e-69 UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits ... 264 5e-69 UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 T... 264 5e-69 UniRef50_Q0C591 DNA polymerase III, subunits gamma and tau n=1 T... 264 5e-69 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 264 6e-69 UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dic... 264 6e-69 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 263 6e-69 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 263 6e-69 UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 T... 263 6e-69 UniRef50_Q03ZG9 DNA polymerase III, gamma/tau subunit n=2 Tax=Le... 263 7e-69 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 263 7e-69 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 263 7e-69 UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Ta... 263 8e-69 UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymera... 263 8e-69 UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n... 263 9e-69 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 263 9e-69 UniRef50_B3DWR2 DNA polymerase III, gamma/tau subunit n=1 Tax=Me... 263 1e-68 UniRef50_A4CK17 DNA polymerase III subunit gamma/tau n=6 Tax=Bac... 263 1e-68 UniRef50_D1N3S6 DNA polymerase III, subunits gamma and tau n=1 T... 263 1e-68 UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 T... 263 1e-68 UniRef50_B9L148 DNA polymerase III subunit gamma/tau n=1 Tax=The... 263 1e-68 UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and ta... 262 1e-68 UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 T... 262 1e-68 UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymera... 262 2e-68 UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 T... 262 2e-68 UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 T... 262 2e-68 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 262 2e-68 UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 T... 262 2e-68 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 262 2e-68 UniRef50_A5IZC8 DNA polymerase III subunit gamma and TAU n=2 Tax... 262 2e-68 UniRef50_B6YRS0 DNA polymerase III gamma and tau subunit n=2 Tax... 262 2e-68 UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Ta... 262 2e-68 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 262 2e-68 UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 T... 262 2e-68 UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2... 262 3e-68 UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 T... 261 3e-68 Sequences not found previously or not previously below threshold: UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Ta... 270 8e-71 UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, puta... 264 5e-69 >UniRef50_P0AAZ6 Replication-associated recombination protein A n=338 Tax=cellular organisms RepID=RARA_ECO57 Length = 447 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 447/447 (100%), Positives = 447/447 (100%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG Sbjct: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK Sbjct: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED Sbjct: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI Sbjct: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS Sbjct: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA Sbjct: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN Sbjct: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 RGLEGKIGEKLAWLAEQDQNSPIKRYR Sbjct: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 >UniRef50_C6C7V1 AAA ATPase central domain protein n=14 Tax=Proteobacteria RepID=C6C7V1_DICDC Length = 447 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 391/447 (87%), Positives = 411/447 (91%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MSNLSLDFS + FQPLAARMRP LAQYIGQQHLL GKPLPRAIEAG LHSMILWGPPG Sbjct: 1 MSNLSLDFSSHQFQPLAARMRPTTLAQYIGQQHLLGPGKPLPRAIEAGQLHSMILWGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGKTTLAE+I RY ADVERISAVTSG+K+IREA+ERARQNRNAGRRTILFVDEVHRFNK Sbjct: 61 TGKTTLAELIGRYGEADVERISAVTSGIKDIREAVERARQNRNAGRRTILFVDEVHRFNK 120 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQDAFLPHIEDGT+TFIGATTENPSFELNSALLSRARVYLLKSL T DIEQVL QAM D Sbjct: 121 SQQDAFLPHIEDGTVTFIGATTENPSFELNSALLSRARVYLLKSLDTADIEQVLAQAMVD 180 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 + RG GGQ IVLPDETRR +AELVNGDARRALN LEMMADMAEVD G+RVL P LL + Sbjct: 181 RERGLGGQHIVLPDETRRLLAELVNGDARRALNLLEMMADMAEVDADGQRVLTPALLKAV 240 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 +GERSARFDNKGDR+YDLISA+HKSVRGSAPDAALYWYARIITAGGDPLYVARR LAIAS Sbjct: 241 SGERSARFDNKGDRYYDLISAVHKSVRGSAPDAALYWYARIITAGGDPLYVARRLLAIAS 300 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA+ DA Sbjct: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMRDA 360 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 +++PDYDVP HLRNAPT LMKEMG G EYRYAHDE NAYAAGEVYFPPE+A+TRYY PT+ Sbjct: 361 KDKPDYDVPAHLRNAPTSLMKEMGLGAEYRYAHDETNAYAAGEVYFPPEMAETRYYQPTS 420 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 RGLE KIGEKLAWLA QDQNSP KRYR Sbjct: 421 RGLEAKIGEKLAWLAAQDQNSPTKRYR 447 >UniRef50_Q3AA20 ATPase, AAA family n=34 Tax=Bacteria RepID=Q3AA20_CARHZ Length = 444 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 276/427 (64%), Gaps = 2/427 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L ++IGQ+H+L GK L RAI + L S+I +GPPGTGKTTLA +IA Sbjct: 16 PLAYRMRPRSLDEFIGQEHILGEGKLLRRAILSDRLGSLIFYGPPGTGKTTLARIIASTT 75 Query: 75 NADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + E I+AVTSGV EIRE I++A++ + G RT+LF+DE+HRFNK+QQDA LP +E G Sbjct: 76 KSGFESINAVTSGVGEIREVIKKAKEREKYYGERTVLFIDEIHRFNKAQQDALLPEVEAG 135 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TI IGATTENP FE+N+ LLSR+R++ K L E I +++ +A+ DK RG G + + Sbjct: 136 TIVLIGATTENPYFEVNAPLLSRSRIFEFKPLEPEHIREIVRRALVDKERGLGEYKVEIS 195 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +E + + GDAR ALN +E+ D+ G R + E++ + +++ +D +GD Sbjct: 196 EEALDHLVTMAAGDARAALNGIELAVLTTPPDEDGVRKITVEIIEQSMQKKAIVYDKEGD 255 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KS+RGS PDAA+Y+ AR++ AG DP ++ARR + A+EDVG ADP A+ V Sbjct: 256 NHYDTISAFIKSLRGSDPDAAVYYLARMLEAGEDPRFIARRLIVHAAEDVGLADPMALNV 315 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+AA+ VG E +A+A +Y+ACAPKSNAV A ALA R+ + +P HLR Sbjct: 316 AVAAFHALEFVGMPEARLPLAEAAIYIACAPKSNAVIKAIDRALAVVRKGENGPIPQHLR 375 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 +A KE+G G+ Y+Y HD + E Y P + R+Y P++ G E +I ++L Sbjct: 376 DAHYAGAKELGRGKGYKYPHDYPGHFVL-EEYLPENLKGQRFYEPSDSGQEAQIKQRLKE 434 Query: 434 LAEQDQN 440 L + +N Sbjct: 435 LWGKVKN 441 >UniRef50_Q2LUH3 ATPase, AAA family n=27 Tax=Bacteria RepID=Q2LUH3_SYNAS Length = 478 Score = 569 bits (1466), Expect = e-161, Method: Composition-based stats. Identities = 207/442 (46%), Positives = 281/442 (63%), Gaps = 4/442 (0%) Query: 7 DFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTL 66 + ++ + +PLA RMRPE L ++ GQ+HLL L RAIE L S+I WGPPG+GKTTL Sbjct: 32 ETTEQSRRPLADRMRPETLDEFFGQEHLLKKHSLLRRAIEEDRLFSVIFWGPPGSGKTTL 91 Query: 67 AEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGR-RTILFVDEVHRFNKSQQDA 125 A ++A A SAV SGVKE+R+ +E A R +T+LFVDE+HRFNK+QQDA Sbjct: 92 ARIVAGETKAYFAAFSAVLSGVKELRKVVEEAEARWQNNRQKTVLFVDEIHRFNKAQQDA 151 Query: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY 185 FLPH+E G IT IGATTENPSFE+ + LLSR RV +LK S ED+ ++L + + D+ RG Sbjct: 152 FLPHVESGLITLIGATTENPSFEVIAPLLSRCRVLVLKPFSDEDLVRILNRVLRDRRRGL 211 Query: 186 GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERS 245 G + L + + +GDAR ALN+LE +A + + + + E ++ Sbjct: 212 GNLGLELDQDALAYLVHTADGDARTALNSLEAVASLLAAGEGQSSRISRVQVEEALQKKG 271 Query: 246 ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 ++D G Y+LISA HKS+RGS PDAALYW R++TAG DPLY+ARR + ASEDVGN Sbjct: 272 LQYDKSGAEHYNLISAFHKSLRGSDPDAALYWLGRMLTAGEDPLYIARRMVRFASEDVGN 331 Query: 306 ADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD 365 ADP A+ +A+ A F +G EGE A+AQA VYLA APKSNA+Y + A Sbjct: 332 ADPMALSIAMTAMQAFHFIGLPEGELALAQAAVYLATAPKSNALYAGYGRVKAAIAATGT 391 Query: 366 YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI--AQTRYYFPTNRGL 423 VP+H+RNAPT+LMK++GYG++YRYAHD A+ E Y P + + +Y PT+RG Sbjct: 392 LPVPLHIRNAPTRLMKDLGYGRDYRYAHDYEGAWVPQE-YLPDALLAKEHEFYRPTDRGY 450 Query: 424 EGKIGEKLAWLAEQDQNSPIKR 445 E I E+L ++ + ++ Sbjct: 451 ERTIRERLEKWKKRLNEARRQQ 472 >UniRef50_Q74BH4 ATPase, AAA family n=3 Tax=Bacteria RepID=Q74BH4_GEOSL Length = 440 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 212/428 (49%), Positives = 275/428 (64%), Gaps = 7/428 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP L +Y+GQ+HLL GK L R IE+ L S+I WGPPG+GKTTLA VIA Sbjct: 17 PLAERMRPRTLDEYVGQEHLLGEGKLLRRLIESDTLTSLIFWGPPGSGKTTLARVIANAT 76 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + SA+ SG+KEIRE ++ A + + GR TILFVDE+HRFNKSQQDAFLP++E G Sbjct: 77 KSHFIFFSAILSGIKEIREIVKEAEEEKKYRGRNTILFVDEIHRFNKSQQDAFLPYVERG 136 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T T IGATTENPSFE+ + LLSR +V +L LS E++EQ+L A+ D RG G + Sbjct: 137 TFTIIGATTENPSFEVVAPLLSRCKVLVLNPLSQENVEQILRSALADPERGLGASGLAAD 196 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ +AE GD R ALNTLE A + + + E + E ++ +D G+ Sbjct: 197 DDALAFMAEQSGGDGRVALNTLETAARLVK-----NGRIDLESVREAIQKKPLLYDKGGE 251 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y++ISA KS+RGS PD ALYW AR+I AG DPL++ RR + +ASED+GNADPRA+QV Sbjct: 252 EHYNVISAFIKSMRGSDPDGALYWLARMIEAGEDPLFILRRMVILASEDIGNADPRALQV 311 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+AA F VG EG IAQA YLA APKSNA Y AALA+ R+ VP+H+R Sbjct: 312 AVAALQGFQLVGMPEGRIIIAQAATYLATAPKSNASYAGIDAALAEVRKSGALPVPLHIR 371 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 NAPT+LMK++GY + Y+YAHD Y + Y P + R+Y P G E I E++ + Sbjct: 372 NAPTRLMKDLGYHKGYKYAHDYEAGYTP-QNYLPERLEGKRFYAPRGHGYEKTIKERMDY 430 Query: 434 LAEQDQNS 441 + +N Sbjct: 431 IRTLKEND 438 >UniRef50_B5Y9V9 AAA ATPase, central region n=80 Tax=Bacteria RepID=B5Y9V9_COPPD Length = 459 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 216/439 (49%), Positives = 290/439 (66%), Gaps = 7/439 (1%) Query: 8 FSDNTFQP------LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 F D+ F+P LA RMRP L + +GQ G L + IE L S++LWGPPG Sbjct: 6 FQDSLFKPSSKWIPLAERMRPRTLDEIVGQDKAFGKGTLLRKLIEEDKLTSLVLWGPPGV 65 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 GKT++A VIA A R SAVTSG+KEI+E +E A N GRRT++FVDE+H FNK+ Sbjct: 66 GKTSIAMVIANTTKARFLRFSAVTSGIKEIKEVLEDAEVQFNMGRRTVIFVDEIHHFNKT 125 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDAFLP++E G + I ATTENPSFE+ S LLSR++V +L+ L EDI+ +L +A+ DK Sbjct: 126 QQDAFLPYVEKGAVVLICATTENPSFEIISPLLSRSKVVVLEPLEAEDIKTILYRALADK 185 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 RG G + +V+ DE IA +GDAR ALNTLEM + + G RV+ E+++E Sbjct: 186 ERGLGNERVVITDEQLMRIAVYSDGDARIALNTLEMAVFGTDPNSEGIRVISDEVISEAL 245 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 +++ +D G+ Y+LISALHKS+R S PDAALYW AR++ AG DPLYVARR + ASE Sbjct: 246 QKKTLLYDKAGEEHYNLISALHKSMRNSDPDAALYWLARMLEAGEDPLYVARRIVRFASE 305 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG ADP+A+ A+AA+D +G E +AQA+VYL+ APKSN++Y ++ A DA Sbjct: 306 DVGMADPQALMQAVAAFDAANYIGMPECTANLAQAVVYLSLAPKSNSLYVGYEKAKQDAL 365 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 E VP+HLRNAPT+LMKE+GYG++Y+Y+HD A E PP + RYY P+++ Sbjct: 366 ETMAEPVPLHLRNAPTRLMKEVGYGKDYKYSHDYEEHIADMEC-LPPNLLGKRYYLPSDQ 424 Query: 422 GLEGKIGEKLAWLAEQDQN 440 GLE K G++L L + Sbjct: 425 GLESKYGQRLEHLMGVKKK 443 >UniRef50_C4KSW2 Recombination factor protein RarA n=89 Tax=Bacteria RepID=C4KSW2_BURPS Length = 436 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 237/442 (53%), Positives = 297/442 (67%), Gaps = 11/442 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L F+ +PLA +RP+ LA IGQ HLL GKPL A E+G HSMILWGPPG Sbjct: 1 MSDL---FAVEPRRPLAEALRPKTLADVIGQTHLLGEGKPLRLAFESGKPHSMILWGPPG 57 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFN 119 GKTTLA + A + + +SAV GVK+IREA+E+AR N GR TILFVDE+HRFN Sbjct: 58 VGKTTLARLTALAFDCEFIALSAVLGGVKDIREAMEQARDTLNRTGRHTILFVDEIHRFN 117 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 K+QQDA LP +E G +TFIGATTENPSFE+NSALLSRA+VY+LKSL+ +++ Q+L +A Sbjct: 118 KAQQDALLPFVESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLAEDELRQLLKRA-- 175 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 + + D+ + +GDARR LN LE +G + + Sbjct: 176 ---QDVALGGLAFDDKAVDTLVGYADGDARRFLNLLEQA--QTAASSAGVTTIDAAFVES 230 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + RFD GD FYD ISALHKSVRGS+PD ALYW R++ G DP Y+ARR + +A Sbjct: 231 AMTMNARRFDKGGDNFYDQISALHKSVRGSSPDGALYWLCRMLDGGADPKYLARRVVRMA 290 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 ED+G ADPRAMQ+A A + R+G EGE A+AQA++YLACA KSNA Y A+ A+A Sbjct: 291 WEDIGLADPRAMQIANDAAQTYERLGSPEGELALAQAVLYLACAAKSNAGYNAYNEAMAF 350 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 R+ +VPVHLRNAPTKLMKE+GYG YRYAHDE NAYAAGE Y P + + R+Y P Sbjct: 351 VRQDKSREVPVHLRNAPTKLMKELGYGHAYRYAHDEPNAYAAGETYLPDGMREPRWYKPV 410 Query: 420 NRGLEGKIGEKLAWLAEQDQNS 441 RGLE KI +KLAWL E D+++ Sbjct: 411 PRGLETKIADKLAWLRELDRDA 432 >UniRef50_Q480Q0 ATPase, AAA family n=114 Tax=Gammaproteobacteria RepID=Q480Q0_COLP3 Length = 511 Score = 548 bits (1413), Expect = e-154, Method: Composition-based stats. Identities = 271/463 (58%), Positives = 337/463 (72%), Gaps = 24/463 (5%) Query: 7 DFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTL 66 + + ++F PLAA+MRP+ LA Y+GQQH+L PL ++IE GH HS+I WGPPG+GKTTL Sbjct: 50 NAAASSFMPLAAKMRPKTLADYVGQQHILGGDSPLAQSIEQGHCHSLIFWGPPGSGKTTL 109 Query: 67 AEVIARYANADVERISAVTSGVKEIREAIERARQNRN----AGRRTILFVDEVHRFNKSQ 122 AE+IA++ANA++ER+SAVTSG+KEIR AIE+A+ RRT+LFVDEVHRFNKSQ Sbjct: 110 AEIIAQHANAEIERVSAVTSGIKEIRSAIEKAKLRAQGEGANKRRTVLFVDEVHRFNKSQ 169 Query: 123 QDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT 182 QDAFLPHIEDGTI FIGATTENP+FELN ALLSRAR+Y LK L+ +D+ QVL +A+ Sbjct: 170 QDAFLPHIEDGTIIFIGATTENPAFELNQALLSRARLYTLKKLTRDDLAQVLQRAIS-LC 228 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK------------- 229 I L + ++++ +GDARR LN LE D + K Sbjct: 229 EAEQQLSIKLSVDAKQSLLNRSDGDARRLLNLLENCLDSSVTTHENKQDDQHGEQGVSGD 288 Query: 230 -RVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP 288 + + EL+ ++AG + A +D GD FYDLISA HKSVRGS+PDAALYWYARI+TAGGD Sbjct: 289 IKTVTVELIAQVAGSKIALYDKGGDAFYDLISAFHKSVRGSSPDAALYWYARILTAGGDA 348 Query: 289 LYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNA 348 LYVARR LAIASED+GNADPRAMQ+AI AWD F RVGP+EGERAIAQA VY+A APKSNA Sbjct: 349 LYVARRLLAIASEDIGNADPRAMQLAINAWDTFHRVGPSEGERAIAQATVYMALAPKSNA 408 Query: 349 VYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPP 408 VY AF A A++ D DVP+HL+NA + + K++G+G EYRYAHDE NA+AAGE YFP Sbjct: 409 VYQAFNKAKILAQQTCDLDVPLHLKNATSSITKDLGHGSEYRYAHDEVNAFAAGENYFPE 468 Query: 409 EIAQ-----TRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRY 446 +A+ TR Y PT RGLE K+ EKL +L + D+NS +RY Sbjct: 469 ALAKGDSSHTRLYQPTERGLEKKLKEKLDYLNQLDRNSHDQRY 511 >UniRef50_A3DD23 Recombination protein MgsA n=8 Tax=Bacteria RepID=A3DD23_CLOTH Length = 432 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 192/427 (44%), Positives = 279/427 (65%), Gaps = 2/427 (0%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP L ++ GQ+ ++ GK L R I+A + S+IL+GPPGTGKT+LA +IA Sbjct: 6 EPLAYRMRPRTLEEFYGQEEIVGEGKLLNRMIKADRISSIILYGPPGTGKTSLARIIANS 65 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGR-RTILFVDEVHRFNKSQQDAFLPHIED 132 A+ E+++AVT+GV +I+ + + + RT+LF+DE+HRFNKSQQDA LP++ED Sbjct: 66 TKANFEKLNAVTAGVADIKRIVSDTQNPILNPKGRTVLFIDEIHRFNKSQQDALLPYVED 125 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GTI +GATTENP FE+N AL+SR+ V++LK L ++ I++++ A+ DK RG G DI + Sbjct: 126 GTIILVGATTENPFFEVNKALISRSSVFMLKPLGSDAIKKIIRNALTDKERGLGNMDIEI 185 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 ++ +A++ +GDAR ALN LE+ + V GK + +L+ E +++AR+D G Sbjct: 186 EEDALNFLADICDGDARIALNALELAVLTSPVGSDGKFHIDIQLIEECIQKKAARYDKSG 245 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + YD ISA KS+RGS PDAA+++ AR + AG DP+++ARR + A+EDVG A+P A+Q Sbjct: 246 EEHYDNISAFIKSMRGSDPDAAVFYLARALYAGEDPMFLARRIMICAAEDVGMANPAALQ 305 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 VA+AA VG E ++QA + +A +PKSN+ Y A AL D + + +VP+HL Sbjct: 306 VAVAAAQAVHMVGMPEARIILSQAAIMVATSPKSNSCYVAIDRALDDVKNKRTGEVPMHL 365 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 RNA T MKE+GYG+ Y+YAHD + Y P EI T YY P+ G E KI E L Sbjct: 366 RNAVTSGMKELGYGKGYKYAHDYPGNIVDQD-YLPQEIKGTVYYNPSANGYELKIKEWLE 424 Query: 433 WLAEQDQ 439 + + Sbjct: 425 KRRNKRE 431 >UniRef50_Q3B4X4 Recombination protein MgsA n=36 Tax=Bacteria RepID=Q3B4X4_PELLD Length = 457 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 196/431 (45%), Positives = 265/431 (61%), Gaps = 5/431 (1%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 FQPLA R+RP+++ + GQ+HL+ PL R + G L SMI WGPPG+GKTTLAE+ A Sbjct: 24 FQPLAERVRPQSIDEMAGQEHLVGPMGPLRRFLGGGQLPSMIFWGPPGSGKTTLAEICAS 83 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + E++SA+ SGVK++R +E A +R G RT+LF+DE+HRFNKSQQD L IE Sbjct: 84 ALDFRFEQLSAIESGVKDVRRVLENAASSRARGIRTLLFIDEIHRFNKSQQDTLLHAIEQ 143 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G + IGATTENPSFE+N+ALLSR +VY LKSL EDI V+T+A+ + + + + Sbjct: 144 GVVVLIGATTENPSFEINAALLSRMQVYTLKSLGPEDIRLVVTRALSVDPL-FRDRHVQV 202 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D + GDAR+ALN LE A + +D ++ +LL R+ +D+ G Sbjct: 203 ED--MEFLLRFSGGDARKALNALE-AAFLLIAEDEDPALIGRDLLERALQHRAPIYDHGG 259 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + Y+ +SA KS+RGS PDAAL+W AR+I G DP ++ARR + ASED+GNADP A+ Sbjct: 260 EAHYNTVSAFIKSMRGSDPDAALFWLARMIEGGEDPRFIARRLVIFASEDIGNADPYAIT 319 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A++ + T +G E +AQ + YLA PKSNA Y A ALA++ D VP HL Sbjct: 320 LAVSVFQAVTLIGMPEARINLAQGVTYLASCPKSNASYIAVNQALAESASLQDLAVPKHL 379 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 NAPTK MK+ GYG YRY HD N + E YFP + YY P G E + E+L Sbjct: 380 CNAPTKFMKQEGYGAGYRYPHDFPNHFVR-ERYFPDGMEPKPYYRPVEEGREKYLAERLR 438 Query: 433 WLAEQDQNSPI 443 L + +P Sbjct: 439 SLWDDRYGAPD 449 >UniRef50_A8ZU04 AAA ATPase central domain protein n=5 Tax=Bacteria RepID=A8ZU04_DESOH Length = 459 Score = 536 bits (1381), Expect = e-151, Method: Composition-based stats. Identities = 205/440 (46%), Positives = 272/440 (61%), Gaps = 9/440 (2%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 S + +PLA RMRPE L GQ H+ L A+E G L SMILWGPPG GKTTLA Sbjct: 12 SPSGMRPLADRMRPEKLEDLAGQPHVTGPDSLLRSALEKGTLFSMILWGPPGCGKTTLAR 71 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQDAFL 127 ++A A +ISAV SGVKEIRE +E AR+ R ++ TILFVDEVHRFNKSQQDAFL Sbjct: 72 ILAGMTGAAYVQISAVLSGVKEIREVVEAARRRRGEFQKDTILFVDEVHRFNKSQQDAFL 131 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 PH+E G +T IGATTENPSFE+ AL+SR R+ +L + E + QVL +A+ D +G G Sbjct: 132 PHVESGLVTLIGATTENPSFEVIPALMSRCRLIVLNPVPEEAVRQVLLRALADTEKGLGK 191 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + + E +A L +GD R ALN LE A + + + + +++ Sbjct: 192 MGLEIEPEALAHLAALADGDVRTALNNLEAAALLRPAGTG--VTITLAGVEQALDKKALL 249 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D G+ Y+LISALHKS+RGS PDAA+YW R+++ G DP Y+ RR + ASED+GNAD Sbjct: 250 YDKSGEEHYNLISALHKSLRGSDPDAAVYWLERMLSGGEDPFYILRRMVRFASEDIGNAD 309 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ V + A + + +G EG+ AI QA VYLA APKSN++YT ++ Sbjct: 310 PSALGVTLNAMEAYRFLGSPEGDLAIVQAAVYLATAPKSNSLYTMHGEIKRVVKQTGYLP 369 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP H+RNAPT LMK++GYG+ Y+YAHD A+ + Y P ++A + +Y PT RG E + Sbjct: 370 VPKHIRNAPTNLMKDLGYGKGYKYAHDFKEAFVPQD-YLPEKLAGSLFYHPTQRGYEKTV 428 Query: 428 GEKLAWLAEQDQNSPIKRYR 447 E+L KRYR Sbjct: 429 KERLDKWRALK-----KRYR 443 >UniRef50_C8R0G7 AAA ATPase central domain protein n=3 Tax=Bacteria RepID=C8R0G7_9DELT Length = 461 Score = 534 bits (1376), Expect = e-150, Method: Composition-based stats. Identities = 214/447 (47%), Positives = 295/447 (65%), Gaps = 15/447 (3%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 D PLA RMRP L ++GQ+HLLA K L G+L S++LWGPPG+GKTTLA + Sbjct: 16 DQPTTPLAERMRPARLDDFVGQRHLLADDKLLAGLSRHGYLPSLLLWGPPGSGKTTLARI 75 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLP 128 +A + AD SAV SGVKEIRE +ER+R+ R +GR ++LFVDE+HRFNKSQQDAFLP Sbjct: 76 LAGGSGADFVFFSAVLSGVKEIREIVERSRRIRAESGRGSVLFVDEIHRFNKSQQDAFLP 135 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 H+E G IT IGATTENPSF + + LLSR RV +L L+ ED++ +L +A+ D+ RG G Sbjct: 136 HVEAGLITLIGATTENPSFHVIAPLLSRCRVIVLNPLAAEDLQIILERALSDEERGLGKL 195 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMAE---------VDDSGKRVLKPELLTE 239 + + E + + +GDAR LN+LE+ A +A+ + G+ + + E Sbjct: 196 RLKISREAADHLISIADGDARSLLNSLEIAAALAQDQARGQTASQEIGGEVQIGLTTVEE 255 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 S R+D G+ Y+LISALHKS+R S PD ALYW R++ AG +PLY+ARR + A Sbjct: 256 AIQRHSLRYDADGEEHYNLISALHKSLRDSDPDGALYWLGRMLAAGEEPLYIARRLIRFA 315 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SED+GNADP+A+ +A+ A + + +G EGE A+AQA+VYLA APKSNAVY A+ LA Sbjct: 316 SEDIGNADPQALGLAVQARESYHLLGSPEGELALAQAVVYLATAPKSNAVYAAYNQVLAT 375 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 ++ VP+HLRNAPTKLM+++ YG++Y+YAHD+ + + P ++A TR+Y PT Sbjct: 376 IKKSGSLPVPLHLRNAPTKLMRDLNYGKDYQYAHDDRLGLVDQQ-HLPDQLAGTRFYHPT 434 Query: 420 NRGLEGKIGEKLAW----LAEQDQNSP 442 NRG E + E+L LA++ + P Sbjct: 435 NRGHEALVKERLEKWRKILAQRKKTQP 461 >UniRef50_B0RT44 ATPase n=6 Tax=Xanthomonas RepID=B0RT44_XANCB Length = 456 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 225/426 (52%), Positives = 292/426 (68%), Gaps = 3/426 (0%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 + PLA RMRP L + +GQ+ LLAA L RA+E+G +HSMILWGPPG GKTTLA ++ Sbjct: 20 SAMGPLAERMRPRTLDEMVGQKRLLAADSALRRAVESGRVHSMILWGPPGCGKTTLALLL 79 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A YA+A+ + ISAV SG+ ++R+ + A Q +GRRT+LFVDEVHRFNK+QQDAFLPHI Sbjct: 80 AHYADAEFKAISAVLSGLPDVRQVLAEAAQRFASGRRTVLFVDEVHRFNKAQQDAFLPHI 139 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E GTI F+GATTENPSFELNSALLSR RV++L+ +S +DI + L +A+ D RG G + I Sbjct: 140 ERGTILFVGATTENPSFELNSALLSRCRVHVLEGVSPQDIVEALQRALHDAERGLGQETI 199 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + + + IA +GD RRAL LE+ A++A + + P L ++ +R+ RFD Sbjct: 200 QVSEASLLEIASAADGDVRRALTLLEIAAELATGEGGE---ITPRTLLQVLADRTRRFDK 256 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 G++FYD ISALHKSVR S PDAALYW R++ G DP Y+ARR +A ED+G ADPRA Sbjct: 257 NGEQFYDQISALHKSVRSSNPDAALYWLTRMLDGGCDPAYLARRLTRMAIEDIGLADPRA 316 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 +A+ AWD + R+G EGE A AQ ++YLA KSNA Y AF A A+ R +VP+ Sbjct: 317 QSMALEAWDIYERLGSPEGELAFAQLVLYLASTAKSNAGYAAFNQAKAEVRASGTQEVPL 376 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLRNAPTKLMK +GYGQ+Y+Y HD A + FP + + YY P RG+E K+ EK Sbjct: 377 HLRNAPTKLMKTLGYGQDYQYDHDAEGGIALDQTGFPDAMGERVYYNPVPRGMEIKLKEK 436 Query: 431 LAWLAE 436 L L E Sbjct: 437 LDRLRE 442 >UniRef50_B0CAJ0 ATPase, AAA family protein n=50 Tax=Bacteria RepID=B0CAJ0_ACAM1 Length = 742 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 188/423 (44%), Positives = 268/423 (63%), Gaps = 4/423 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAAR+RP L +++GQ ++ G+ L RAI+A L S+I +GPPGTGKTTLA++IA Sbjct: 17 PLAARLRPRTLDEFVGQDEIVGPGRLLRRAIQADQLSSLIFYGPPGTGKTTLAQIIANTT 76 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AV +G+K+IR +++ A+ R G+RTILFVDEVHRFNK+QQDA LP +E+G Sbjct: 77 QAHFLALNAVLAGIKDIRSSVDEAQDRRGQYGQRTILFVDEVHRFNKAQQDALLPWVENG 136 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+ IGATTENP FE+N AL+SR+R++ L+SL +D+ QVL +A++DK GYG I L Sbjct: 137 TVILIGATTENPYFEVNKALVSRSRIFQLRSLMPDDLRQVLERALQDKYFGYGDTAIELE 196 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + + NGDAR LN LE+ + E DD G + + R+ +D +GD Sbjct: 197 GAATEHLINVANGDARALLNALELAIETTEPDDQGVIPITLAVAEASIQRRAVLYDKEGD 256 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 +D ISA KS+RGS PDAALYW AR++ AG DP ++ RR + +ASEDVG ADP+A+ V Sbjct: 257 AHFDTISAFIKSMRGSDPDAALYWLARMVYAGEDPRFIFRRMIILASEDVGLADPQAVGV 316 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +A F R+G EG+ +AQA +YL+ APKSN+ A+ ALA + + DVP LR Sbjct: 317 VMACAQAFDRIGLPEGQYPLAQAALYLSTAPKSNSA-LAYFDALASVEKEREGDVPNPLR 375 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + + G+G Y+Y H + + A + Y P + +Y P+++G E I ++A Sbjct: 376 DKS-RDKHAFGHGANYKYPHAYRDHWVAQQ-YLPDSLQGQVFYQPSDQGAEAAIQTQIAR 433 Query: 434 LAE 436 E Sbjct: 434 QRE 436 >UniRef50_C0BGA7 AAA ATPase central domain protein n=4 Tax=Bacteroidetes RepID=C0BGA7_9BACT Length = 425 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 187/428 (43%), Positives = 262/428 (61%), Gaps = 9/428 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP++L +Y GQ HL+ L + I G S+I WGPPGTGKTTLA+++A Sbjct: 4 PLAERMRPKSLGEYFGQDHLVGPKGSLTQMISNGVFPSLIFWGPPGTGKTTLAQLLALEK 63 Query: 75 NADVERISAVTSGVKEIREAIERARQN--RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 ++SA+ +GVKEIRE I +A + +G+ ILF+DE+HRF+KSQQD+ L +E Sbjct: 64 ERPFYQLSAINAGVKEIREIISKAEHSGGLFSGKSPILFIDEIHRFSKSQQDSLLNAVEK 123 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT IGATTENPSFE+ +ALLSR +VY+L +L ED+E++L A+E + + + Sbjct: 124 GIITLIGATTENPSFEVINALLSRCQVYVLNTLKKEDLEKILNHALEKDSIIKEYKIQLK 183 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 E EL GDAR+ L+ LE++ + + K +L +L+ E S FD G Sbjct: 184 ETEAL---IELAGGDARKLLSLLELVI---QANSKEKLILTNDLVFETVQTNSVLFDKNG 237 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD++SA KS+RGS P+ A+YW AR+I G D ++ARR L +A+ED+G A+P A+ Sbjct: 238 DFHYDIVSAFIKSIRGSDPNGAIYWLARMIEGGEDIGFIARRMLILAAEDIGIANPTALV 297 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A + + VG EG +++ +YLA +PKSN Y A AA R+ + VP+HL Sbjct: 298 LANSTFQAVNSVGYPEGRILLSECALYLATSPKSNTAYKAIGAAQEKVRQTGNLPVPLHL 357 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 RNAPTKLMKEMGYG++Y+YAHD N + E + P +I T Y P N E I E L Sbjct: 358 RNAPTKLMKEMGYGEDYKYAHDFQNQFVDQE-FLPEKIKGTTLYSPGNNSKENSIREFLK 416 Query: 433 WLAEQDQN 440 ++ Sbjct: 417 LRWKKKYG 424 >UniRef50_C9KPY4 Replication-associated recombination protein A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY4_9FIRM Length = 462 Score = 529 bits (1363), Expect = e-149, Method: Composition-based stats. Identities = 198/425 (46%), Positives = 270/425 (63%), Gaps = 5/425 (1%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 TF+PLA RMRP N +++GQQ + G L R IE + S+I +GPPGTGKTTLA++IA Sbjct: 38 TFEPLARRMRPRNFDEFVGQQEAVGRGHFLRRMIEMDQIPSIIFYGPPGTGKTTLAQMIA 97 Query: 72 RYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQDAFLPHI 130 ++ E+++AV++G+ ++R ++ A + R RRTI+F+DE+HRFNKSQQD LP++ Sbjct: 98 AMTDSAFEKLNAVSAGISDLRRIVKEADEARRYYQRRTIVFIDEIHRFNKSQQDVLLPYV 157 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 EDG + IGATTENP FE+N ALLSR R+ L L+ + +VL +A++D+ RG GGQ + Sbjct: 158 EDGRLILIGATTENPFFEVNHALLSRVRIVRLYQLTDAQLVEVLRRALKDEERGLGGQHV 217 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 +PDE A+A++ GDAR ALN LE A M + ++L EI GER R+D Sbjct: 218 EVPDEVLLAMAQIAGGDARMALNLLEGAAAMLPTTGG---TVTLDMLEEITGERVQRYDK 274 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 GD YD SA KS+RGS PDAAL++ AR++ AG D ++ARR + ASEDVGNADP A Sbjct: 275 TGDNHYDTASAFIKSMRGSDPDAALHYLARMLAAGEDVKFIARRIVICASEDVGNADPMA 334 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A+AA + VG E +AQA+ Y+A APKSNA Y AAL D R + VP Sbjct: 335 LPLAMAAAEAVQFVGMPEARITLAQAVTYIASAPKSNAAYLGIDAALKDVRTKDCGTVPK 394 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLR+A K +G+GQ YRY HD N + A + Y P +I YY PT+ G E + + Sbjct: 395 HLRDAHYKGAAALGHGQSYRYPHDYPNHFEAQD-YLPDKIRTAHYYEPTDIGREKVLHDY 453 Query: 431 LAWLA 435 L Sbjct: 454 LRKCW 458 >UniRef50_Q3A5K5 ATPase, AAA family n=9 Tax=Bacteria RepID=Q3A5K5_PELCD Length = 726 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 197/440 (44%), Positives = 272/440 (61%), Gaps = 9/440 (2%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 NL S + +PLA+RMRP L +Y+GQ H+L G+ L RAI A L S+I +GPPGTG Sbjct: 2 NLFSQASSFSSEPLASRMRPRTLEEYVGQDHILGEGRLLRRAIRADQLSSLIFYGPPGTG 61 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKS 121 KTTLA+VIA + ++AV SGVK++REAIE ARQ++ +RTILFVDEVHR+NKS Sbjct: 62 KTTLAQVIANSTASRFVSMNAVLSGVKDLREAIEDARQSQEYYDKRTILFVDEVHRWNKS 121 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDA LP +E GTI IGATTENP FE+N AL+SR+RV+ L L+ E++ Q++TQ ++DK Sbjct: 122 QQDALLPWVEKGTIILIGATTENPYFEVNKALVSRSRVFQLLGLTEENLRQIVTQTLQDK 181 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD----DSGKRVLKPELL 237 RGYG + + + + +GDAR LN L++ + + + + Sbjct: 182 QRGYGKWQVEFEPDALDHLVRVASGDARSLLNALQLAVETTPESFPPPANSRIHITLSAA 241 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E +++ +D +GD +D ISA KS+RGS PDAALYW AR++ AG DP Y+ RR L Sbjct: 242 EESIQQKAVLYDKEGDYHFDTISAFIKSLRGSDPDAALYWMARMVRAGEDPRYIFRRMLI 301 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVG ADP A+ V AA F RVG EG+ + QA +YLA PKSN+ F A Sbjct: 302 SASEDVGMADPYALGVVEAAASAFDRVGLPEGQFHLTQATLYLATCPKSNSSLAFFDALE 361 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 A A+E + +VP HLR++ + G+G+ Y+Y H + + A + Y P + +Y Sbjct: 362 AVAKE--EAEVPNHLRDSS-RDEHSFGHGKGYKYPHAFRDHWVAQQ-YLPGTLKGRIFYQ 417 Query: 418 PTNRGLEGKIGEKLAWLAEQ 437 PT +G EG I ++ E+ Sbjct: 418 PTGQGYEGSIQTQVIRHREE 437 >UniRef50_C6X3K0 ATPase, AAA family n=21 Tax=Bacteria RepID=C6X3K0_FLAB3 Length = 442 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 177/426 (41%), Positives = 269/426 (63%), Gaps = 7/426 (1%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 + PLA +MRP+ L + GQ+HL + + +E L+S+I WGPPGTGKTT+AE+I+ Sbjct: 20 SNTPLAEQMRPKTLDEVRGQEHLTGEKGTVRKMLENDTLNSLIFWGPPGTGKTTIAEIIS 79 Query: 72 RYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 + ++SAV+SGVK++RE IE A+ QN +G+ ILF+DE+HRFNKSQQD+ L + Sbjct: 80 EQSGRKFFKLSAVSSGVKDVREVIEEAKKQNLFSGKSPILFIDEIHRFNKSQQDSLLHAV 139 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G I IGATTENPSFE+ SALLSR++VY+LKSLS E +E++ ++++ +G + Sbjct: 140 EKGWIVLIGATTENPSFEVVSALLSRSQVYVLKSLSYEKLEELAELSLKNYNASHGTEFR 199 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + E + GDAR+ +N++E + + +S K+ + + E+ E A +D Sbjct: 200 IKDKEAF---IQYSGGDARKLINSVENVLN--NFKNSDKKEISNADVLEVLQETMALYDK 254 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 G++ YD+ISA KS+RGS P+ A+YW AR++ G D ++ARR L +A+ED+G A+P A Sbjct: 255 NGEQHYDIISAFIKSMRGSDPNGAVYWLARMLVGGEDVKFIARRMLILAAEDIGLANPNA 314 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A + +G E +++ VYLA +PKSN+ Y A A+A ++ + VP+ Sbjct: 315 LVIANNCFQAVNVIGNPEARIILSETTVYLAVSPKSNSTYLAINEAMAFVKKTGNLPVPL 374 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLRNAPTKLMK++ YG++Y YAH + E + P EI+ ++Y P N E KI E+ Sbjct: 375 HLRNAPTKLMKDLNYGKDYDYAHSHEGNFVDLE-FLPDEISGEKFYNPGNNSTENKIKEE 433 Query: 431 LAWLAE 436 L + Sbjct: 434 LNRKWK 439 >UniRef50_A5FMX8 AAA ATPase, central domain protein n=9 Tax=Bacteroidetes RepID=A5FMX8_FLAJ1 Length = 425 Score = 519 bits (1338), Expect = e-146, Method: Composition-based stats. Identities = 177/428 (41%), Positives = 263/428 (61%), Gaps = 9/428 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP L YI Q HL+ L + I G + S+I WGPPGTGKTTLA++IA+ + Sbjct: 4 PLAERIRPRTLEDYISQSHLVGPNGSLTQQISKGIIPSLIFWGPPGTGKTTLAQIIAQES 63 Query: 75 NADVERISAVTSGVKEIREAIERARQN--RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 +SA+ SGVK+IR+ IE+A+Q+ + ILF+DE+HRF+KSQQD+ L +E Sbjct: 64 KRPFYELSAINSGVKDIRDVIEKAKQSGGLFTAKNPILFIDEIHRFSKSQQDSLLAAVEK 123 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT IGATTENPSFE+ ALLSR++VY+L + + +D+E +L +A+ + ++I L Sbjct: 124 GWITLIGATTENPSFEVIPALLSRSQVYILNAFTKDDLEALLHRAI-KIDKELSSKNITL 182 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 + A+ L GD R+ LN E++ + + D+ V+ + + + + + +D G Sbjct: 183 KET--EALLRLSGGDGRKLLNIFELVVNASASDE---IVITNDRVLALVQQNTVLYDKTG 237 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 ++ YD++SA KS+RGS P+ A+YW AR+I G D ++ARR L ++SED+GNA+P A Sbjct: 238 EQHYDIVSAFIKSIRGSDPNGAVYWLARMIEGGEDVKFIARRMLILSSEDIGNANPTAFI 297 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A + + +G E ++Q +YLA +PKSNA Y A A ++ D VP+HL Sbjct: 298 MANNTFQAVSTIGYPESRIILSQCAIYLATSPKSNASYMAIGNAQQLVKQTGDLPVPIHL 357 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 RNAPTKLMKE+GYG++Y+Y+HD AN +A E + P I +T Y P + E E L Sbjct: 358 RNAPTKLMKELGYGEDYKYSHDYANNFAEQE-FLPDAIKETVLYNPGSNSRENSNREFLK 416 Query: 433 WLAEQDQN 440 + Sbjct: 417 NRWKDKYG 424 >UniRef50_B8DZZ0 AAA ATPase central domain protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZZ0_DICTD Length = 431 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 175/434 (40%), Positives = 270/434 (62%), Gaps = 13/434 (2%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 DN+++PL+ RMRP L +++G + ++ L +AI G+L S+I++GPPG+GKTTL+ Sbjct: 10 EDNSYEPLSFRMRPRTLEEFLGAEDIIGEKSFLRKAINKGYLPSLIIYGPPGSGKTTLSV 69 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQDAFL 127 ++A+ NA+ ++A GV+E++EA+++A++N +RT+LF+DE+H FNK QQD L Sbjct: 70 LLAKAINAEFIELNAAIVGVQELKEALQKAKRNLELYNKRTVLFLDEIHHFNKLQQDVLL 129 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 P +E G + IGATTENP F LN+ LLSR R+ LK LS E+IE+++ +A+EDK RG G Sbjct: 130 PFVERGIMILIGATTENPFFSLNTTLLSRCRLVELKPLSKENIERIIKRALEDKERGLGE 189 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 +D+ + ++ I NGDAR ALNTLE+ + M ++GK ++ ++ E+ G+R R Sbjct: 190 RDLEINEDAMEEIVRFANGDARIALNTLELASFMVAPSENGKLIITRNIVKEVIGKRIFR 249 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D +GD Y ISA KS+RGS PDAALY+ A+++ +G DP ++ARR + A+ED+G AD Sbjct: 250 YDQRGDEHYHTISAFIKSIRGSDPDAALYYLAKMLLSGEDPRFIARRLIIHAAEDIGMAD 309 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ +A +A+ VG E +A+A VYLA APKSN++ A+ E Sbjct: 310 PFALVIAQSAYYAVDVVGMPEARIPLAEATVYLATAPKSNSIIIGIDKAMRYIEEHGISV 369 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 +P HLR G +Y Y HD + + + Y P +I +Y P+++G E I Sbjct: 370 IPEHLR----------GNSPKYIYPHDYPDHFVK-QKYLPEDI-GEIFYSPSDQGKEKMI 417 Query: 428 GEKLAWLAEQDQNS 441 E+L L ++ Sbjct: 418 RERLENLWKERYKK 431 >UniRef50_B3E131 ATPase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E131_METI4 Length = 454 Score = 515 bits (1328), Expect = e-145, Method: Composition-based stats. Identities = 169/426 (39%), Positives = 260/426 (61%), Gaps = 6/426 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PL+ +MRP L + +GQ+ +L GKPL R I+A + S+IL+GPPGTGKTTLAE+IA+ Sbjct: 21 PLSTKMRPRTLEELVGQEDILLPGKPLRRLIDADRIQSLILYGPPGTGKTTLAEIIAKKT 80 Query: 75 NADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + R++AV +GV +IR+ I +A + + T+LF+DE+HRFNKSQQD LP +E G Sbjct: 81 KSFFARLNAVEAGVSDIRKVIGQAALRWKKEKKHTLLFIDEIHRFNKSQQDVLLPDLETG 140 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATT NP F L + LLSR+ ++ K LS + +E +L +A+ DK RG G ++ + Sbjct: 141 IIKLIGATTHNPCFYLTAPLLSRSHLFEFKPLSKQSLETLLLRALTDKERGLGNYEVSIE 200 Query: 194 DETRRAIAELVNGDARRALNTLEMMA-DMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 E + + L GDARR LN LE+ + + +L E + + ++ R+D+ Sbjct: 201 KEAKEFLLNLCEGDARRLLNYLEIAVLSSLQENQPAPVILNIETIQNLVQKKIPRYDHGE 260 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD ISA KS+RGS PD+ALYW A++I+AG DP ++ARR + +A+ED+G A+P+ + Sbjct: 261 DEHYDTISAFIKSIRGSDPDSALYWLAKMISAGEDPRFIARRLVILATEDIGLANPQGLP 320 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A AA++ ++G EG +A A +YLA +PKSN+ Y A A+ + +VP L Sbjct: 321 IATAAFEAIEKIGMPEGRIPLAFATLYLALSPKSNSAYKAIDKAIEWIEKEATVEVPQML 380 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +++ K++G G Y Y+H+ +A + I +Y PT+RG E + E+L Sbjct: 381 KDSHYSGAKKLGKGVGYLYSHNFRDAVSPQRY----GIEPGTFYVPTDRGKEKEFKERLE 436 Query: 433 WLAEQD 438 ++ + Sbjct: 437 YIEKLR 442 >UniRef50_D2LJI0 AAA ATPase central domain protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJI0_RHOVA Length = 455 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 205/426 (48%), Positives = 269/426 (63%), Gaps = 9/426 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PL R+RP +L IGQ+HLL G PL R + SMI WGPPGTGKTT+A ++A+ Sbjct: 31 RPLPDRLRPASLGDVIGQEHLLGEGGPLRRIADGEAPRSMIFWGPPGTGKTTVARLMAKG 90 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A A E+ISA+ SGV ++R+ + A+ + G+ TILFVDE+HRFN+SQQD+FLP +EDG Sbjct: 91 AGAHFEQISAIFSGVADLRKVFDAAKDRQRFGQGTILFVDEIHRFNRSQQDSFLPFVEDG 150 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TI IGATTENPSFELN ALLSRA+V + + L+ ++IEQ+L +A G+ + L Sbjct: 151 TIILIGATTENPSFELNGALLSRAKVLVFRRLTDDNIEQLLARA-----ESVLGKTLPLT 205 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + R A+ + +GD R ALN E D+ + LTEI R+ +D D Sbjct: 206 PDARGALIGMADGDGRTALNLTE---DVFATGRDPSHPIDTAELTEIVQRRAPLYDKNRD 262 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YDLISALHK+VRGS PDAALYW+ R+I G PLY+ARR + +A ED+G ADP A+ Sbjct: 263 GHYDLISALHKAVRGSDPDAALYWFCRMIDGGEAPLYLARRMVRMAVEDIGLADPNALVQ 322 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A AA D + +G EGE A+AQ +VYLA APKSNA Y A+ AA+ A+E P H+ Sbjct: 323 ANAAKDAYDFLGSPEGELALAQCVVYLATAPKSNAAYKAYGAAMRYAKESGSLPPPKHIL 382 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 NAPTKLMK GYG Y Y H +G+ YFP + + +Y P RG E +I E+L Sbjct: 383 NAPTKLMKSEGYGAGYVYDHATEEG-VSGQNYFPDGLDRAEFYHPGGRGYEVRIEERLRA 441 Query: 434 LAEQDQ 439 AE + Sbjct: 442 WAEVRR 447 >UniRef50_B8DU13 AAA ATPase, central domain protein n=49 Tax=Bacteria RepID=B8DU13_BIFA0 Length = 504 Score = 513 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 186/446 (41%), Positives = 267/446 (59%), Gaps = 11/446 (2%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH------LHSMILWGP 58 + D S+ +PLA RMRP L + +GQ+H+LA G PL R ++ S+IL+GP Sbjct: 8 ASDPSEEVVRPLAVRMRPTTLDEVVGQRHVLAPGSPLRRLADSASTGSLTAPSSVILFGP 67 Query: 59 PGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHR 117 PG GKTTLA ++A+ + E +SAVTSGVK++RE + RA + + G+ T+LF+DEVHR Sbjct: 68 PGVGKTTLAHIVAKQSGRQYEELSAVTSGVKDLREVLRRAHERLVSQGKETVLFIDEVHR 127 Query: 118 FNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 F+KSQQDA LP +E+ +TFI ATTENPSF + LLSR+ V L+SL E++ V+ +A Sbjct: 128 FSKSQQDALLPSVENRDVTFIAATTENPSFSVIKPLLSRSVVVKLESLEPEELRTVIERA 187 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV-LKPEL 236 + + RG GG+ + + + I L GDAR++L LE A + S + ++ Sbjct: 188 VSN-PRGLGGK-VRVQGDAVDGIIRLAGGDARKSLTILEAAAGAVDESGSNVPAEITTDV 245 Query: 237 LTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCL 296 ++ + + R+D GD YD+ISA KS+RGS DA L++ AR+I AG DP ++ARR + Sbjct: 246 VSTVMDVAAVRYDRNGDDHYDVISAFIKSMRGSDVDATLHYLARMIRAGEDPRFIARRIM 305 Query: 297 AIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA 356 A+E+VG A P+ +Q+ +AA +G E +++A + +A APKSNA YTA A Sbjct: 306 IAAAEEVGMAAPQILQITVAAAQAVQMIGMPEARIILSEAAIAVATAPKSNASYTAINQA 365 Query: 357 LADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 LAD VP+H+RNAPT LMK G + Y YAHD NA + Y P + YY Sbjct: 366 LADVDAGLIGQVPLHIRNAPTTLMKSWGNHEGYHYAHDYPNAVVEQQ-YMPDVLVGREYY 424 Query: 417 FPTNRGLEGKIGEKLAWLAEQDQNSP 442 P +RG E +IG +L + P Sbjct: 425 HPNSRGYEREIGPRLDRIRAIIHGEP 450 >UniRef50_D0LV62 AAA ATPase central domain protein n=6 Tax=cellular organisms RepID=D0LV62_HALO1 Length = 463 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 195/430 (45%), Positives = 265/430 (61%), Gaps = 9/430 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA RMRP++L +++GQ HLL K L R L S+ILWGPPGTGKTTLA ++A Sbjct: 15 QPLAERMRPKSLQEFVGQNHLLGPRKLLARLGPGAALPSLILWGPPGTGKTTLAHILATR 74 Query: 74 ANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 A + + ISAVT+GV+E+R+ + A R G RT+LF+DE+HRF+K+QQDA LPH+E Sbjct: 75 AGSRLAAISAVTAGVREMRQLVSEAGDRRDQFGSRTVLFIDEIHRFSKAQQDALLPHVEA 134 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GT+T IGATTENPSF +N+ALLSR RV L +LS E++ + +A+ D+ RG G + + Sbjct: 135 GTVTLIGATTENPSFHVNAALLSRCRVLRLGALSDEELGALARRALSDRERGLGRAAVSV 194 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADM-------AEVDDSGKRVLKPELLTEIAGERS 245 DE + GDARR LN LE+ + E +D R L E + E +++ Sbjct: 195 SDEVLTDLVAQSGGDARRMLNALEVAVSLVRGGEGEGEDEDEAPRALGREAIEEALQQKT 254 Query: 246 ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 +D GD + ++SA KS+RGS PDAA YW R++ AG DPL+V RR + ASED+GN Sbjct: 255 LLYDKAGDEHFGVVSAFIKSMRGSDPDAAAYWMTRMLEAGEDPLFVLRRMVVFASEDIGN 314 Query: 306 ADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD 365 ADP+A+ VA +A + +G EG + QA VY+ACAPKSN T + AA R+ Sbjct: 315 ADPQALAVATSALSAYQFLGMPEGVLPMTQAAVYMACAPKSNTALTTYAAARRAVRQHGA 374 Query: 366 YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 VP LRNA L +EMG+ ++YRY H+ A Y E Y P + R+Y P G E Sbjct: 375 LPVPKKLRNANNALDREMGHAKDYRYPHNFAGHYVP-ETYLPEGLEGARFYEPAESGAER 433 Query: 426 KIGEKLAWLA 435 +GE++A Sbjct: 434 AMGERVARWR 443 >UniRef50_C6NSC7 ATPase, AAA family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSC7_9GAMM Length = 437 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 209/429 (48%), Positives = 287/429 (66%), Gaps = 3/429 (0%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLAARMRP +LA++IGQ+ LL P+ + LHS++ WGPPG GKTTLA ++A Sbjct: 7 RPLAARMRPRSLAEFIGQERLLGPAGPIAAMLRQKSLHSLVFWGPPGVGKTTLAHLLAAE 66 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A+V +SAV SGV+E+R A A + R G T+LF+DE+HRFNK+QQDA LPH+E+G Sbjct: 67 QGAEVLTLSAVDSGVRELRAAAAVATERRGRGESTVLFIDEIHRFNKTQQDALLPHLEEG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+T IGATTENPSF L ALLSR R+Y+L+ L E + +L +++ D+ RG G + LP Sbjct: 127 TLTLIGATTENPSFALVGALLSRIRIYVLEPLGQEALAAILERSLHDRERGLGDLAVELP 186 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D R + +GDARR LN L++ +A + D G+R L +L AG+ FD G+ Sbjct: 187 DSARAQLLAQADGDARRLLNILDLAVQLAPLHD-GRRRLDTPVLAAAAGQAWRHFDKGGE 245 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 FYD ISALHKS+RGS DA+LYW AR++ G DPLY+ARR + +A EDVG ADPRA+++ Sbjct: 246 HFYDEISALHKSLRGSDVDASLYWLARMLDGGADPLYLARRLIRVAVEDVGLADPRALEI 305 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+AA F +G EGE A+A+A VYLA PKSN Y+A+K R +P + VP+HLR Sbjct: 306 ALAARAAFQALGSPEGELALAEAAVYLASCPKSNRTYSAWKKVQEAIRRQPSHPVPLHLR 365 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ--TRYYFPTNRGLEGKIGEKL 431 NAPTKL+K++ YG++Y+Y HD +A A + Y P +A +Y + RG E ++GE+L Sbjct: 366 NAPTKLLKDLDYGRDYQYDHDFPDAIAPAQTYLPEALAGLSGPWYQASERGFEQRMGERL 425 Query: 432 AWLAEQDQN 440 W+A + Sbjct: 426 RWIAAHRKG 434 >UniRef50_C8WQ98 AAA ATPase central domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ98_ALIAD Length = 447 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 180/412 (43%), Positives = 252/412 (61%), Gaps = 3/412 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L + +G ++L+ L R IE L S+IL+GPPGTGKTT+AEVIAR Sbjct: 17 PLAYRMRPRSLDEMVGHENLVGRDGILRRMIERDRLMSIILYGPPGTGKTTIAEVIARQT 76 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AVTSG+ ++R+A+E AR+ R+ RRT++F+DE+HRFNKSQQDA LPH+E G Sbjct: 77 KARFIPLNAVTSGIADVRKAVETAREERDLYARRTVVFLDEIHRFNKSQQDALLPHVEAG 136 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 ++ +GATTENP F++N+ALLSR+ V+ L+ LS +DI +++ A+ D+ RG G + L Sbjct: 137 LLSLVGATTENPYFDVNAALLSRSHVFRLEPLSPDDIGRLVDMAIADEERGLGRMRVRLH 196 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERS-ARFDNKG 252 + RR + GDARRALN LE+ A A V G + + R+D G Sbjct: 197 PDARRVLTLQARGDARRALNLLELAAFAARVGPDGATEIGMREVEAALEASGGPRYDRAG 256 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD ISA KSVRGS +AA+ W A+++ G DP ++ARR + +A+EDVG ADP A+ Sbjct: 257 DDHYDTISAFIKSVRGSDVNAAMLWLAKMLEGGEDPAFIARRLMILAAEDVGMADPNALP 316 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A++ W +G E +A+ YLA APKSN Y A AL D R +VP+HL Sbjct: 317 IAVSGWQAAMAIGMPEARIVLAEVTAYLAKAPKSNHAYMAINRALDDVRSGLPLEVPLHL 376 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLE 424 R+ K K +G+G+ Y Y HD Y + Y+P + YY + E Sbjct: 377 RSTAYKGAKALGHGEGYLYPHDYPGHYVE-QNYWPIGVEPRAYYREGDDDRE 427 >UniRef50_O48696 F3I6.23 protein n=4 Tax=Embryophyta RepID=O48696_ARATH Length = 525 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 188/416 (45%), Positives = 256/416 (61%), Gaps = 9/416 (2%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 S QPL+ RMRP L +GQ HLL+ L A+E+ L S++ WGPPGTGKT++A+ Sbjct: 96 SHRQHQPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAK 155 Query: 69 VIARYAN----ADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQ 123 + + +SAVTSGVK++R+A+E A++ GR+ T+LF+DEVHRFNKSQQ Sbjct: 156 SLINSSKDPSLYRFVSLSAVTSGVKDVRDAVESAKRLNLEGRKRTVLFMDEVHRFNKSQQ 215 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLP IEDG+I FIGATTENPSF L + LLSR RV L L +E +L +A++D R Sbjct: 216 DTFLPVIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDDSER 275 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 G + + D +A +GDAR ALN LE+ A MA V+ + E Sbjct: 276 GLPNS-VEVDDSVIEFLANNCDGDARVALNALEISATMATTRAGTDAVVSIDDAKEALQC 334 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 + +D G++ Y+LISALHKS+RG +AA+YW AR++ G +PLY+ARR + ASED+ Sbjct: 335 KHLAYDKAGEQHYNLISALHKSMRGGDANAAIYWLARMLEGGEEPLYIARRLIRFASEDI 394 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE- 362 G ADP A+ A+A + +G E +AQ YLA APKS AVY A AA ++ Sbjct: 395 GLADPSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSIAVYRAIGAAQKVVKDS 454 Query: 363 -RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 + VP+HLRNAPTKLMKE+GYG+EY Y + ++ AAG+ Y PP + ++ Sbjct: 455 VGQNEGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSS-AAGQTYLPPSLLHHKFLE 509 >UniRef50_UPI0001C42F86 recombination factor protein RarA n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42F86 Length = 422 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 158/425 (37%), Positives = 244/425 (57%), Gaps = 7/425 (1%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP+ + IGQ HL+ GK L R ++ G L SMIL+GPPG GKT++A IA Sbjct: 4 EPLAYRMRPKKIEDIIGQSHLVGDGKLLRRMVDVGQLSSMILYGPPGVGKTSIATAIAGS 63 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + + ++AV K++ A+ A+ + I+ +DEVHR +K++QD LPH+E G Sbjct: 64 TDTPFKLLNAVVHNKKDMEIAVAEAKMHGQL----IVILDEVHRLDKAKQDFLLPHLEKG 119 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATT NP +N A+ SR +++ L+SL+ +DI+ L +A+++ G+G + I + Sbjct: 120 LIILIGATTANPYHSINPAIRSRCQIFELESLTPDDIKTALIRAIQNPESGFGKEQIEME 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 ++ +A + GD R ALN LE+ + G + + E ++S D GD Sbjct: 180 EDAISHLAHMCGGDVRSALNALELAVKSTFATEDGIKHISLETAESCIQKKSFHHDKDGD 239 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD++SA KS+RGS +A L++ AR++ AG D +ARR L I+ ED+G A+P+A Sbjct: 240 AHYDVLSAFQKSIRGSDVNAGLHYLARLLEAG-DLTSIARRLLVISYEDIGLANPQAGVR 298 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +AA + R+G E ++ A+V L +PKSN+ Y A AA+AD R DVP HL+ Sbjct: 299 TLAAIESAERLGMPEARIPLSNAVVELCLSPKSNSAYKAIDAAIADIRGGASGDVPKHLK 358 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG-LEGKIGEKLA 432 +A K K +G G EY+Y HD + + + Y P ++ + RYY P G E + + Sbjct: 359 DAHYKGAKALGRGVEYQYPHDFDHGWVKQQ-YLPDKLKKARYYEPKRTGKFEQALADIYD 417 Query: 433 WLAEQ 437 L ++ Sbjct: 418 KLDQR 422 >UniRef50_Q6MPI4 ATPase, AAA family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI4_BDEBA Length = 449 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 174/441 (39%), Positives = 259/441 (58%), Gaps = 6/441 (1%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 M S + + PL+ +RP+ L GQQ L L + + G+L S+I+WGPPG Sbjct: 13 MDLFSASQASHGTSPLSEILRPKTLDDIFGQQKTLGPQSKLGQMLRKGYLPSLIIWGPPG 72 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGR-RTILFVDEVHRFN 119 TGKTT A ++++ NA ++AV SG K +RE E + R + +TILFVDE+HRFN Sbjct: 73 TGKTTFALALSQHFNAHYVHLNAVDSGAKALREVGEAGKDRRLQYQQKTILFVDEIHRFN 132 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 K+QQD LP +E G + +GATTENPS+ELN ALLSR RV + + LS +D+ +++ +A Sbjct: 133 KAQQDVLLPFVEKGDLVLVGATTENPSYELNRALLSRCRVVIFERLSEDDLNKIVKRAET 192 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 + +L ++ + + E +GDARR +N+LE++ + + G +L + E Sbjct: 193 HYAKPLDK---ILTEDAHKNLLEYSDGDARRLINSLEILYTFTKDEVEGP-LLDVNDMRE 248 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + + +D + YD ISA KS+RGS PDAA+Y+ AR++ G DP+++ARR + +A Sbjct: 249 LLQQNPLGYDKNSEMHYDTISAFIKSIRGSDPDAAMYYLARMLDGGEDPVFIARRLIILA 308 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SED+GNADPRA+ VAIA +G EG ++Q YLA PKSNA Y A A Sbjct: 309 SEDIGNADPRAISVAIAGLQAVEAIGLPEGAITLSQVTTYLASCPKSNASYMALHKAREL 368 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 + VP+HLR+A T L K++GYG++Y+Y H+ + + Y P E+ +T Y PT Sbjct: 369 VEKTRTLPVPLHLRSAKTALAKDLGYGRDYKYPHNYPTGWVE-QSYLPEEVEKTAIYEPT 427 Query: 420 NRGLEGKIGEKLAWLAEQDQN 440 RG E I + L+W+ + Sbjct: 428 TRGFEKNIRDYLSWMKLKKDK 448 >UniRef50_O13984 ATPase WRNIP1 homolog C26H5.02c n=1 Tax=Schizosaccharomyces pombe RepID=WRIP1_SCHPO Length = 504 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 173/420 (41%), Positives = 245/420 (58%), Gaps = 11/420 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R RP++L +Y+GQ+ L+ + IE +SMILWG GTGKTTLA +IA Sbjct: 84 RPLAERARPKSLDEYVGQEELVGERGIIRNLIEQDRCNSMILWGSAGTGKTTLARLIAVT 143 Query: 74 ANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + ISA ++ V + R+ E ++ GR+TI+F+DEVHRFN++QQD FLP +E Sbjct: 144 TKSRFIEISATSTTVADCRKIFEDSQNYLTLTGRKTIIFLDEVHRFNRAQQDIFLPMVEK 203 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G +T IGATTENPSF LNSAL+SR V++LK L+ ++++++L A ++ G + Sbjct: 204 GLVTLIGATTENPSFRLNSALISRCPVFVLKKLTRDNVKKILNHACLLESERLGSSMPNV 263 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 I+ + +GDAR ALN LEM M L E + + SA +D G Sbjct: 264 ETSIIDYISAITDGDARMALNALEMSIGMLRQG-----PLSLEDIKDKLVRSSALYDRVG 318 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD ISA HKSVRGS DA LY+ R++ +G DPLYVARR + IASED+G AD + Sbjct: 319 DVHYDTISAFHKSVRGSDVDATLYYLGRMLESGEDPLYVARRMVRIASEDIGIADNSMLP 378 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD---YDVP 369 +A + + +VG E + +A V LA APKS VY ++ A + PD ++P Sbjct: 379 LASSTFTAVQQVGMPEADVILAHCAVALALAPKSVDVYRSYNAVKSFLSSHPDAGRAEIP 438 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF-PTNRGLEGKIG 428 +H+RNAPT LMK++GY + Y+Y D + E Y P I T++Y P + +I Sbjct: 439 MHIRNAPTNLMKQLGYHKGYKYNPDYKDGLVMQE-YLPDSIKGTKFYKLPIELKEDEEIK 497 >UniRef50_D1BNC9 AAA ATPase central domain protein n=4 Tax=Veillonellaceae RepID=D1BNC9_VEIPT Length = 433 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 184/441 (41%), Positives = 263/441 (59%), Gaps = 9/441 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 M +L NT++PL RMRP L GQ+ + G L +E + SM+ +GP G Sbjct: 1 MDSLFDMTPTNTYEPLPVRMRPTKLDHLYGQEKAIGKGTFLRAMVEKDTIPSMLFYGPCG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFN 119 TGKTTLA +IA+ +N+ ++A +G+ E+R IE AR+ R+ +RTILF+DE+HRFN Sbjct: 61 TGKTTLAGIIAKVSNSHFVNLNATNAGIGELRTIIEDARKRVRSLQQRTILFLDEIHRFN 120 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 KSQQD LP +EDGTI IGATTENP FE+N LLSR R+ L++L+ + I Q+L +A+ Sbjct: 121 KSQQDVLLPCVEDGTIILIGATTENPFFEVNRPLLSRLRLITLEALTPKAIGQILRRAIT 180 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 D+ G G + + + DE + VNGD R ALN LE A M V D G + E+L + Sbjct: 181 DEAVGLGKRHLQVTDEVLEDVGIFVNGDGRMALNILEQAAAM--VPDEG--TITIEVLEK 236 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + G R +D KGD YD ISA KS+RGS A +++ AR+I AG DP ++ARR + A Sbjct: 237 VVGRRIYTYDKKGDSHYDTISAFIKSMRGSDVQATVHYLARMIEAGEDPNFIARRIVICA 296 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 +EDVG ADP+A+ +A AA VG E +++A Y+A APKSN+ Y A AA++D Sbjct: 297 AEDVGLADPQALILANAAAQAAHMVGFPEARIILSEAACYVALAPKSNSAYVAIDAAISD 356 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 R + VP HL+++ ++G+G+ Y+YAH+ N Y + Y P + YY Sbjct: 357 VRHKDCGQVPDHLKDSHYSGASKLGHGKAYKYAHNYPNGYVKQQ-YLPTPLIDATYYKGI 415 Query: 420 NRGLEGKIGEKLAWLAEQDQN 440 RG E ++ L ++ +N Sbjct: 416 KRGTEEQL---LHDWEKRSKN 433 >UniRef50_C0X719 Crossover junction endodeoxyribonuclease n=29 Tax=Bacteria RepID=C0X719_ENTFA Length = 425 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 163/429 (37%), Positives = 245/429 (57%), Gaps = 7/429 (1%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA RMRP +L + +GQQHL+ GK + R +EA L SMIL+GPPGTGKT++A IA Sbjct: 3 QPLAYRMRPRHLDEVVGQQHLVGPGKIIRRMVEAKMLSSMILYGPPGTGKTSIASAIAGS 62 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N ++A T K+++ E A+ + IL +DE+HR +K++QD LPH+E+G Sbjct: 63 TNYAFRMLNAATDTKKDLQIVAEEAKMSGTV----ILLLDEIHRLDKTKQDFLLPHLENG 118 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATTENP +N A+ SR +++ +K L+ DI+Q + +A+ D TRG G + L Sbjct: 119 RIIMIGATTENPYITINPAIRSRTQIFEVKPLTETDIQQAIQEALTDSTRGLGDYPVHLE 178 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 ++ + + NGD R ALN LE+ ++ G+ + ++ E ++ D GD Sbjct: 179 EKALQHLTRATNGDLRSALNGLELAVKSTPKNEQGEIKITLPIIEECVQRKALTHDKDGD 238 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD+ISA KS+RGS DAAL++ R++ AG P+ + RR + IA ED+G +P A Sbjct: 239 AHYDVISAFQKSIRGSDVDAALHYLGRLVEAGDLPI-ICRRLMVIAYEDIGLGNPAAAAR 297 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 + A ++G E +A ++ L +PKSN+ TA AALAD R+ DVP HLR Sbjct: 298 TVTAVQAAEKLGFPEARIPLASVVIDLCLSPKSNSAVTAIDAALADIRQGSVGDVPDHLR 357 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG-LEGKIGEKLA 432 +A KE+ G Y+Y H+ N + + Y P ++ + RYY P + G E + ++L Sbjct: 358 DAHYAGAKELNRGIGYQYPHNFENGWVNQQ-YLPDKLKEARYYEPIDIGKYEQALHQQLK 416 Query: 433 WLAEQDQNS 441 + E Q Sbjct: 417 RIQEWKQKK 425 >UniRef50_A7NI76 AAA ATPase central domain protein n=22 Tax=Bacteria RepID=A7NI76_ROSCS Length = 544 Score = 499 bits (1285), Expect = e-140, Method: Composition-based stats. Identities = 216/459 (47%), Positives = 289/459 (62%), Gaps = 39/459 (8%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAARMRP L +++GQ H++ GK L RAI L S+ILWGPPG+GKTTLA +IA Sbjct: 22 PLAARMRPRALDEFVGQDHIVGEGKLLRRAITNDALFSIILWGPPGSGKTTLARIIADTT 81 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +A E++SAV++GV ++R ++ A+ +RTI+F+DE+HRFNK+QQDA LP++EDG Sbjct: 82 HAHFEQLSAVSAGVADLRRVVKEAQDRLGMFQQRTIVFIDEIHRFNKAQQDAILPYVEDG 141 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TI IGATTENPSFE+N AL SRARV++L+SL+ E I ++ +A+ D RG G +++L Sbjct: 142 TIILIGATTENPSFEVNPALRSRARVFVLESLTDEQIGVIVDRALTDAERGLGALNVLLA 201 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + R + + NGDAR ALN LE A GKR+L + + + R+ ++D G+ Sbjct: 202 ADARGYLINMSNGDARTALNALEAAALAKSPGIGGKRLLTVDDIRDALQSRAVQYDKNGE 261 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISALHKSVR S PDAALYW R++ G DPLY+ARR + +A ED+G ADP A+ + Sbjct: 262 LHYDAISALHKSVRDSDPDAALYWLGRMLDGGEDPLYIARRVVRMAIEDIGMADPHALPL 321 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 IAA +G EG+ A+AQA+VYLA APKSNAVY A+ AAL D E + VP+HLR Sbjct: 322 TIAAQQAVHFLGQPEGDLALAQAVVYLAQAPKSNAVYVAYAAALNDVAETRNEPVPLHLR 381 Query: 374 NAPTKLMKEMGYGQEYRYAHDEAN-------------------------AYAAG------ 402 NAPT LMK +GY + Y+YAHD+ + YA G Sbjct: 382 NAPTALMKRLGYARGYKYAHDDDDAQAETRNEPVPLHLRNAPTALMKRLGYARGYKYAHD 441 Query: 403 -------EVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 + +FPP + RYY PT RG E + E+LAW Sbjct: 442 DDDAQVEQEHFPPNLRGRRYYEPTGRGFEATVRERLAWR 480 >UniRef50_B9HZJ7 Predicted protein n=3 Tax=rosids RepID=B9HZJ7_POPTR Length = 553 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 186/420 (44%), Positives = 245/420 (58%), Gaps = 21/420 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP + IGQ LL+ L AI + S+ILWGPPGTGKT++A I Sbjct: 126 EPLAERMRPRTIDDVIGQDLLLSQNSLLRSAIRCSRIPSIILWGPPGTGKTSIARAIVTS 185 Query: 74 ANA------DVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAF 126 AN+ +SAVT GVK+ R+A E AR +RT+LF+DEVHRFNKSQQD+F Sbjct: 186 ANSQGSSSYRFVSLSAVTCGVKDARDAFEDARKFKLKNSKRTVLFLDEVHRFNKSQQDSF 245 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY- 185 LP IEDGTI FIGATTENPSF L + LLSR RV L L ++ +L +A+ D +G Sbjct: 246 LPVIEDGTIVFIGATTENPSFHLVTPLLSRCRVLTLSPLKPHHVQTILKRAVNDPDKGLS 305 Query: 186 ---GGQDIVLPDETRRAIAELVNGDARRALNTLEM--MADMAEVDDSGKRVLK---PELL 237 G + + ++ ++ +GDAR ALN LE+ A V G L + Sbjct: 306 KSLGSLGVDVSEDAVEFLSTNCDGDARVALNALEISAATAAARVGSDGDLRLASVALDDA 365 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E + +D G+ Y+LISALHKS+RGS DA++YW R++ G PLY+ARR + Sbjct: 366 KEALQSKHLAYDRAGEEHYNLISALHKSMRGSDADASIYWLVRMLEGGEQPLYIARRLVR 425 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVG ADP A+ A+A + +G E +AQ + YLA APKS +VY A AA Sbjct: 426 FASEDVGLADPLALNQAVACYQACHFLGMPECNVILAQCVAYLALAPKSISVYRAMGAAQ 485 Query: 358 ADARE--RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 RE + VP+HLRNAPTKLMKE+GYG++Y Y D A + + PP + ++ Sbjct: 486 KVVRESVGQNEGVPLHLRNAPTKLMKELGYGKDYIYTPDNP---TANQSFLPPSLQGYKF 542 >UniRef50_D0N7J3 ATPase WRNIP1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N7J3_PHYIN Length = 499 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 185/414 (44%), Positives = 245/414 (59%), Gaps = 10/414 (2%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 D + PLA RMRP +L +GQ+ LL G L IEA + +MILWGPPG GKTTLA V Sbjct: 80 DASAVPLAERMRPTDLNDLVGQEELLGPGSLLSTLIEADRVPNMILWGPPGCGKTTLAHV 139 Query: 70 IARYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLP 128 I++ +S TS ++++A++RAR + + RRTI+FVDE+HRFNK QQD FLP Sbjct: 140 ISKKTGCKFISLSGATSKAGDMKDAVDRARGERKMFRRRTIVFVDEIHRFNKIQQDFFLP 199 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 +EDGTIT IGATTENPSFE+N+ALLSR RVY LK + E IE++L +A+ Sbjct: 200 PVEDGTITLIGATTENPSFEVNNALLSRCRVYSLKKHTPESIERILRRALT----AGDQM 255 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK--RVLKPELLTEIAGERSA 246 DE + + GDAR ALN LEM A +D + RV + A ++ Sbjct: 256 SFEAEDEAIKYLTTQCAGDARAALNCLEMAIQTAPIDPDKRVLRVSAIHVQHCFAHRQTL 315 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 +D D YD+ISALHKS+RGS +A LYW AR++ G +PLYVARR + +ASEDVG A Sbjct: 316 FYDRNADMHYDVISALHKSIRGSDENATLYWLARMLEGGENPLYVARRLIRVASEDVGLA 375 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR---ER 363 P + +A++A+ G E + +A LA APKS VY A+K A + Sbjct: 376 APELLPLAVSAYQAAHFTGMPECDVVLAHVATMLARAPKSIEVYAAYKRAKQSIHDWGKG 435 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 DVP+H+RNAPTKLMKEMGY + Y+Y + Y P E+ T ++ Sbjct: 436 ALPDVPMHIRNAPTKLMKEMGYAKGYKYNPHYTAEELKDQTYLPDEMVDTNFFE 489 >UniRef50_Q1QXX6 Recombination protein MgsA n=9 Tax=Bacteria RepID=Q1QXX6_CHRSD Length = 469 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 228/426 (53%), Positives = 299/426 (70%), Gaps = 3/426 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP L Y+GQ+ L+ GKPL R E+G + SMILWGPPG GKTTLA+++A + Sbjct: 38 PLAYRMRPRRLDDYVGQEALVGPGKPLRRMAESGAVRSMILWGPPGVGKTTLADILADAS 97 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 A +ER+SAV +GVK+IR A+ERAR+ + G+ T+LF+DE+HR NKSQQDA LPH+E G Sbjct: 98 GAMLERLSAVMAGVKDIRAAVERAREGQVRGQPTLLFLDEIHRLNKSQQDALLPHVESGL 157 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 +T IGATTENPSFE+NSALLSRARVY+L+ L TED+ +VL QA+ D RG G + I + Sbjct: 158 LTLIGATTENPSFEVNSALLSRARVYVLRKLETEDLLRVLHQALADTERGLGKRHIEADE 217 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 +A +GDARRAL LE D AE + G+R L + L E+ G +++ FD +GD Sbjct: 218 GVLETLARSASGDARRALGLLETACDFAEPTEGGER-LTLQALHEVLGHQASAFDKQGDH 276 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 +YDL+SA+HKS+R S PDAAL + A+ GGDPL V RR AIASEDVGNA+PRA+ + Sbjct: 277 YYDLLSAIHKSIRSSRPDAALLYIAQFTQGGGDPLDVVRRLAAIASEDVGNAEPRALPLV 336 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 +AAWD + R+G EG+RAIA A ++LA APKSNA+ A+ AA PD++VP +LRN Sbjct: 337 MAAWDAYLRLGDYEGQRAIAHAALHLAIAPKSNAIDQAWNAAKQFVAAHPDFEVPTYLRN 396 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVY--FPPEIAQTRYYFPTNRGLEGKIGEKLA 432 APTKLM +G+G+ YRYAH+E N Y AG + +P E+ ++ PT G E + + A Sbjct: 397 APTKLMASLGHGEGYRYAHNEPNGYPAGRAHDCWPAELPAATFFAPTEYGQEKRFKQMQA 456 Query: 433 WLAEQD 438 W AE D Sbjct: 457 WRAELD 462 >UniRef50_A5WC21 Recombination protein MgsA n=9 Tax=Bacteria RepID=A5WC21_PSYWF Length = 439 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 181/426 (42%), Positives = 252/426 (59%), Gaps = 9/426 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L + IGQ HLLA G P+ R +E GHL S+IL G G GKTT+A ++A Sbjct: 14 PLAQRLRPKRLDEVIGQTHLLAPGAPIQRFVEHGHLPSLILHGEAGIGKTTIAMLLADAV 73 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAG---RRTILFVDEVHRFNKSQQDAFLPHIE 131 +SA+ +GVK++RE ++ + G ++F+DE+HRFNK+QQDA L +E Sbjct: 74 GRPFYPLSAINTGVKQLREVLDAGSSSGQGGLDFASPVVFIDEIHRFNKAQQDALLGAVE 133 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 G IT IGATTENPSF +N+ALLSR +VY L+ L I ++L +A+ + Sbjct: 134 SGDITLIGATTENPSFSVNNALLSRCQVYRLQPLDDTQIGELLQRALSQDEF---LSQLS 190 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + + IA L GDAR+ALN LEM ++ V+ LL+ +A R+D Sbjct: 191 IDLQALPQIANLAQGDARKALNLLEMAVQASDHSKQ-PIVIDDALLSSVAQTTLQRYDKD 249 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 GD+ YD+ISA+ KSVRGS PDAALYW AR++ AG P ++ARR + +ASED+GNA+P A+ Sbjct: 250 GDQHYDIISAMIKSVRGSDPDAALYWMARMLVAGEPPEFIARRLVILASEDIGNANPNAL 309 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A AA +G E + Q +VYLA + KSN+ Y A A+ A++ VP+H Sbjct: 310 LLADAALRSVKAIGMPEARIILGQVVVYLATSAKSNSTYLAINKAMQLAQQDQS-PVPMH 368 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 LRN TKLM+ GYG+ Y Y HD N Y + Y P + TR+Y + E + + Sbjct: 369 LRNGVTKLMQSQGYGEGYIYPHDYPNHYQPQQ-YLPDNLVGTRFYEYADNQREQHSLQFM 427 Query: 432 AWLAEQ 437 WL Q Sbjct: 428 QWLQTQ 433 >UniRef50_Q2J818 Recombination protein MgsA n=12 Tax=Bacteria RepID=Q2J818_FRASC Length = 519 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 192/452 (42%), Positives = 266/452 (58%), Gaps = 28/452 (6%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAAR+RP L + +GQ+HLL G PL R +E G S++LWGPPGTGKTTLA +++R Sbjct: 52 PLAARLRPRTLDEVVGQRHLLGPGSPLRRLVEGGATTSVVLWGPPGTGKTTLAHIVSRAT 111 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +SAVT+GVK++R I+ AR+ +G RT+LF+DEVHRF ++QQDA LP +E G Sbjct: 112 GRRFRELSAVTAGVKDVRAVIDEARETLSTSGARTVLFIDEVHRFTRTQQDALLPSVERG 171 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T + ATTENP F + S LLSR+ + L+ L+ +DI VLT+A+ D RGY G+ + + Sbjct: 172 WVTLVAATTENPFFSVVSPLLSRSLLLTLEPLTDDDIRGVLTRALRD-PRGYDGR-LSVS 229 Query: 194 DETRRAIAELVNGDARRALNTLEMMADM------------------------AEVDDSGK 229 DE R + L GDARRAL TLE A+ AE + + Sbjct: 230 DEAREHVVRLAGGDARRALTTLEAGAEALLEAHECESGPGGKAGAGADAGADAEAFVNPR 289 Query: 230 RVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPL 289 L +LL + R+D GD+ YD+ISA KS+RG DAAL++ AR++ AG DP Sbjct: 290 PRLDLDLLERAVNRAAVRYDRSGDQHYDVISAFIKSMRGGDVDAALHYLARMLEAGEDPR 349 Query: 290 YVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV 349 +VARR + +ASED+G ADP A+ VA+AA VG E A+AQA+++LA APKSNAV Sbjct: 350 FVARRMIILASEDIGMADPGALGVAVAASQALEFVGLPEARLALAQAVIHLALAPKSNAV 409 Query: 350 YTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPE 409 A AA +D R VP HLR+A + + +G+G YRY H+ + Y P Sbjct: 410 IRAIDAATSDVRAGRAGPVPAHLRDAHYRGARRVGHGAGYRYPHEAPGNVVRQQ-YPPDG 468 Query: 410 IAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441 + T YY P+ G E + +++ L + Sbjct: 469 LTSTDYYQPSGNGFERRAADRVHELRGVVRGD 500 >UniRef50_C8W9U5 AAA ATPase central domain protein n=2 Tax=Atopobium RepID=C8W9U5_ATOPD Length = 443 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 182/418 (43%), Positives = 254/418 (60%), Gaps = 13/418 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAARMRP L Y+GQ+ + G L +AIE L S++L+GP GTGKTTLA +IA Sbjct: 18 PLAARMRPTTLDGYVGQEDAVGPGSWLRKAIEHDTLSSVLLYGPAGTGKTTLARIIAHTT 77 Query: 75 NADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +A+ +SA+T VK++R IE A + AGRRTILF+DE+HRF +SQQDA L +ED Sbjct: 78 HAEFVEVSAITGTVKDLRREIEAAESRLLTAGRRTILFIDEIHRFTRSQQDALLHAVEDR 137 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + IGATTENP FE+NSAL+SR+RV L +LS I++++ +A+E + G VL Sbjct: 138 IVVLIGATTENPYFEVNSALISRSRVVELHALSDNAIDELIQRALESEDGLAGA--FVLE 195 Query: 194 DETRRAIAELVNGDARRALNTLEMMADM------AEVDDSGKRVLKPELLTEIAGERSAR 247 ++ R+ I L GD R AL +LE+ + M A+ S V+ + + E R Sbjct: 196 EDARKEIVTLAGGDGRAALTSLELASQMVDVPESADGKASEPLVITKQNVLEANPRRGLP 255 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D GD YD+ISA KS+RGS PDAALYW AR+I AG DP ++ARR + +ASED+GNAD Sbjct: 256 YDKAGDMHYDIISAFIKSMRGSDPDAALYWLARMIDAGEDPKFIARRIMILASEDIGNAD 315 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P+A+ +A AA+ +G E +AQA++Y+A APKSNA AAL + R P + Sbjct: 316 PQALLIAHAAFRSAEVIGYPECRINLAQAVIYMALAPKSNAAEAGIDAALHEVRTGPRRE 375 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 VP +LR+ +E G Y Y H+ + + Y P + + ++ P+ RG E Sbjct: 376 VPSYLRDRTRPGSEEYG---NYLYPHNYPGGWIE-QRYLPEGLERGAFFSPSPRGWEA 429 >UniRef50_O34528 Uncharacterized AAA domain-containing protein yrvN n=349 Tax=cellular organisms RepID=YRVN_BACSU Length = 421 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 162/427 (37%), Positives = 236/427 (55%), Gaps = 7/427 (1%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA RMRP + IGQQHL+A K + R ++A HL SMIL+GPPG GKT++A IA Sbjct: 1 MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAG 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +++AV + K++ E Q + IL +DEVHR +K +QD LP++E+ Sbjct: 61 STSIAFRKLNAVINNKKDM----EIVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLEN 116 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G I IGATT NP +N A+ SR +++ L+ L+ E I+Q L +A+ D+ RG G + + Sbjct: 117 GMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALERALHDEHRGLGTYSVSI 176 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ A GD R ALN LE+ + G+ + E E ++S D G Sbjct: 177 DDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDG 236 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD++SA KS+RGS +AAL++ AR+I AG D +ARR L IA ED+G A P+A Sbjct: 237 DAHYDVLSAFQKSIRGSDANAALHYLARLIEAG-DLESIARRLLVIAYEDIGLASPQAGP 295 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + A RVG E +A A++ L +PKSN+ A ALAD R DVP HL Sbjct: 296 RVLNAIQTAERVGFPEARIPLANAVIELCLSPKSNSAILAIDEALADIRAGKIGDVPKHL 355 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG-LEGKIGEKL 431 ++A K +E+G G +Y+Y H+ N + + Y P + +YY P G E + + Sbjct: 356 KDAHYKGAQELGRGIDYKYPHNYDNGWVEQQ-YLPDPLKNKQYYKPKQTGKFESALKQVY 414 Query: 432 AWLAEQD 438 L ++ Sbjct: 415 DKLMKRK 421 >UniRef50_C6D7W1 AAA ATPase central domain protein n=2 Tax=Bacillales RepID=C6D7W1_PAESJ Length = 436 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 171/425 (40%), Positives = 254/425 (59%), Gaps = 7/425 (1%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA RMRPE L YIGQ+H++ AGK L RAIE + S++L+GPPG GKTTLA +I++ Sbjct: 17 LADRMRPETLDDYIGQEHIIGAGKLLRRAIEGDQVSSILLYGPPGCGKTTLANIISKRTA 76 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + +++AV + VK++RE I+ A+ N+ G++TILF+DEVHRFN S+QDA LP +E G Sbjct: 77 GEFVKLNAVDASVKDVREVIDTAKTNKLMYGKKTILFLDEVHRFNTSRQDALLPAVEQGI 136 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 I FIGATTENP +N ALLSR+ ++ L+ L+ + + + +A+ DK RG G + + Sbjct: 137 IIFIGATTENPFHHVNGALLSRSTLFQLEPLNEKHALEAMKRALTDKDRGLGFMTLHAEE 196 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 E + IA + GD RRALN LE+ A + G + E+ E + + R D Sbjct: 197 EALQHIAAMAGGDIRRALNALELAAVTTPSEPDGSVRITMEVAQESIRKPTVRADTSTQ- 255 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITA-GGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD++SA HKS+RGS+ DAAL+W+ + G DP+ RR + SED+G A+P+AM Sbjct: 256 -YDVLSAFHKSIRGSS-DAALFWFLYAVEKLGMDPMTFLRRLIVACSEDIGLANPQAMVQ 313 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+ A D + ++G E + IAQAI++ +PKSNA A A++ +VP+HLR Sbjct: 314 AVTAMDAYHKIGWPEAKYNIAQAILFAVESPKSNAAAVAIGKAMSVIEGAGQAEVPLHLR 373 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + K +++G+ + Y+Y HD Y + Y P + Y T +G+EGKI + Sbjct: 374 DTHYKGAQQLGH-EGYKYPHDYPGHYVNQQ-YLPDNLKGVTIYKATEQGMEGKIRQNQEL 431 Query: 434 LAEQD 438 + Sbjct: 432 RQRKK 436 >UniRef50_B6HVW8 Pc22g06370 protein n=36 Tax=cellular organisms RepID=B6HVW8_PENCW Length = 539 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 168/411 (40%), Positives = 239/411 (58%), Gaps = 12/411 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP+ L + GQ+ L+ L IE + SMILWG GTGKTT+A VIA Sbjct: 123 PLAERMRPKTLEEVCGQE-LVGPNGILRGLIEQDRVPSMILWGSAGTGKTTIARVIASLV 181 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + I++ +SGV E ++ AR GR+TI+F DE+HRF+KSQQD FL +E G Sbjct: 182 GSRFVEINSTSSGVAECKKIFAEARSELGLTGRKTIIFCDEIHRFSKSQQDVFLGPVESG 241 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T IGATTENPSF++ +ALLSR R + L L+ EDI +L +A++ + Y ++ + Sbjct: 242 QVTLIGATTENPSFKVQNALLSRCRTFTLAKLTDEDIISILHRALQVEGPSYSPSEL-VD 300 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +E + +A +GDAR +LN LE+ D+++ K LK L + +D GD Sbjct: 301 EELIQYLARFADGDARTSLNLLELAMDLSKRAGMDKEDLKRSLTKTLV------YDRAGD 354 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD ISA HKS+RGS PDAALY+ AR+I +G DPLY++RR + +ASED+G AD + + Sbjct: 355 QHYDTISAFHKSIRGSDPDAALYYLARMIQSGEDPLYISRRLIVVASEDIGLADNTMLSL 414 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD--YDVPVH 371 AI+ ++G E +A A V +A + KS Y A E +P+H Sbjct: 415 AISTHSAVEKIGLPEARINLAHATVAMALSKKSTRAYRGLNNVFAALNEPGIAGLPIPIH 474 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 LRNAPTKLMKE+GYG EY+Y + + + Y P ++ + + G Sbjct: 475 LRNAPTKLMKELGYGAEYKYNPNYVDGKV-QQDYLPEQLLGRTFLEDLDLG 524 >UniRef50_UPI000192574D PREDICTED: similar to Werner helicase interacting protein 1 n=1 Tax=Hydra magnipapillata RepID=UPI000192574D Length = 527 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 169/423 (39%), Positives = 242/423 (57%), Gaps = 19/423 (4%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA +MRP N + GQ A L + + S+ILWGPPG GKT+ A +I+R Sbjct: 110 PLAEQMRPNNFDNFYGQNS-FGAKNLLKELFVSNKIPSLILWGPPGCGKTSFAHIISRRC 168 Query: 75 N-----ADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLP 128 +SA +G+ ++++ I+ A+ + R+T+LF+DE+HRFNK QQD FLP Sbjct: 169 KESDSKYRFVTLSATMAGINDVKDEIKVAKNEKKLTSRKTVLFIDEIHRFNKMQQDTFLP 228 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 ++EDGTI IGATTENPSF +N+AL+SR V + SL TE I ++L A+E Q Sbjct: 229 YVEDGTIVLIGATTENPSFYINNALISRCHVVVFNSLETEVILKILQNAIE--LLNETDQ 286 Query: 189 DIV---LPDETRRAIAELVNGDARRALNTLEMMADMAEVD---DSGKRVLKPELLTEIAG 242 ++ + +A+ NGDAR ALN L+M+ + + EL+ E Sbjct: 287 EVAKCRFEEGALNLVAQYANGDARCALNKLDMILQAKKESIHVSQANSQISCELIREELQ 346 Query: 243 ERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 +D GD Y+LISALHKS+RGS DA++YW AR++ G PLY+ARR + IASED Sbjct: 347 RCCVNYDKAGDEHYNLISALHKSIRGSDVDASIYWLARMLEGGEKPLYIARRLIRIASED 406 Query: 303 VGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE 362 +G AD A+ A++A+ +G E + +AQ +VYLA APKS AVY A+K A + Sbjct: 407 IGLADSNALPQAVSAYQACHFIGMPECDIILAQVVVYLANAPKSIAVYEAYKNAKDFIKN 466 Query: 363 --RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 +VP+HLRNAPTKLM+ +GYG++Y+Y + Y P + +++ T Sbjct: 467 CSGSQPEVPLHLRNAPTKLMENLGYGKDYKYTPLFKED--PMQEYLPKSMLGKKFFNATE 524 Query: 421 RGL 423 G Sbjct: 525 EGN 527 >UniRef50_C8WLQ0 AAA ATPase central domain protein n=3 Tax=Coriobacteriaceae RepID=C8WLQ0_EGGLE Length = 446 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 188/452 (41%), Positives = 255/452 (56%), Gaps = 11/452 (2%) Query: 1 MSNLSLDFSD---NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWG 57 M L + + + PLA RMRP L + +GQ + G L AIE L S+IL+G Sbjct: 1 MDTLFTEMENERKSEVAPLAVRMRPRTLEEVVGQDEAVGPGSWLRNAIEQDQLSSVILFG 60 Query: 58 PPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERA-RQNRNAGRRTILFVDEVH 116 P GTGKT+LA VIA A +SA+ V ++R I+ A ++ G RTILFVDE+H Sbjct: 61 PAGTGKTSLAHVIAETTKATFVEVSAIGGTVSDLRREIDAADKRLSAFGLRTILFVDEIH 120 Query: 117 RFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 RFN+SQQDA L +ED + +GATTENP FE+NSAL+SR+RV L LS E+I ++ + Sbjct: 121 RFNRSQQDALLHAVEDRVLVLVGATTENPFFEVNSALISRSRVVELHGLSDEEIVSLVER 180 Query: 177 AMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV-LKPE 235 A+ D+ RG GG+ L + R AI L GD R AL TLE+ A M + S K + + Sbjct: 181 ALADE-RGLGGR-YRLDAKARDAIVLLAGGDGRAALTTLELAAGMVQPGTSKKPAKITED 238 Query: 236 LLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC 295 + RS +D D YD+ISA KS+RGS PDAALYW AR+I G DP ++ARR Sbjct: 239 NVRAATPHRSLPYDKNKDMHYDVISAFIKSMRGSDPDAALYWLARMIDGGEDPKFIARRM 298 Query: 296 LAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKA 355 ASED+GNADP+A+ +A AA+ +G E +AQA +YLA APKSNA A Sbjct: 299 FIAASEDIGNADPQALLIAEAAFKSAEVIGYPECRINLAQAAIYLALAPKSNAAEAGIDA 358 Query: 356 ALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 AL + R P +VP HLR+ + G EY+Y H + + + + Y P + + + Sbjct: 359 ALNEVRNGPSRNVPDHLRDRHRPGSENYG---EYKYPHSYPSGWVS-QRYLPDGLERGCF 414 Query: 416 YFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR 447 Y ++RG E + A +P R R Sbjct: 415 YRSSDRGWEAYRSDTFARDRLDSGENPTSRGR 446 >UniRef50_Q96S55 ATPase WRNIP1 n=37 Tax=Metazoa RepID=WRIP1_HUMAN Length = 665 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 170/439 (38%), Positives = 244/439 (55%), Gaps = 37/439 (8%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA-- 71 +PLA MRP+ L Y GQ + L +E + S+ILWGPPG GKTTLA +IA Sbjct: 225 KPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASN 284 Query: 72 -RYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPH 129 + + +SA + ++R+ I++A+ ++ R+TILF+DE+HRFNKSQQD FLPH Sbjct: 285 SKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDTFLPH 344 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY---- 185 +E GTIT IGATTENPSF++N+ALLSR RV +L+ L E + +L +A+ Sbjct: 345 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSS 404 Query: 186 -------------GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM----------- 221 + + D+ +A L +GDAR LN L++ Sbjct: 405 RPTDPLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARAGLNGLQLAVLARLSSRKMFCKK 464 Query: 222 -AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + + ++ + E +D G+ Y+ ISALHKS+RGS +A+LYW AR Sbjct: 465 SGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDQNASLYWLAR 524 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DPLYVARR + ASED+G ADP A+ A+AA+ +G E E +AQ +VY Sbjct: 525 MLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGCHFIGMPECEVLLAQCVVYF 584 Query: 341 ACAPKSNAVYTAFKAALADAR--ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS VY+A+ A R + P VP+HLRNAPT+LMK++GYG+ Y+Y + Sbjct: 585 ARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNPMYSEP 644 Query: 399 YAAGEVYFPPEIAQTRYYF 417 + Y P E+ ++ Sbjct: 645 --VDQEYLPEELRGVDFFK 661 >UniRef50_A4E6Q7 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E6Q7_9ACTN Length = 454 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 190/460 (41%), Positives = 259/460 (56%), Gaps = 32/460 (6%) Query: 1 MSNLSLD--FSDNTFQ------PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS 52 M +++D FS +T + PLA RMRP +L +Y+GQQ + G L AIE L S Sbjct: 1 MHGMAMDDLFSASTRERSFKNAPLAVRMRPNSLDEYVGQQKAVGKGSWLRAAIEHDVLSS 60 Query: 53 MILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILF 111 +IL+GP GTGKTTLA +IA + ++ +SAVT VK++R I+ A+ N RRTILF Sbjct: 61 VILYGPAGTGKTTLAHIIANHTKSEFVEVSAVTGTVKDLRRVIDEAKTRLNTYDRRTILF 120 Query: 112 VDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIE 171 +DE+HRF+KSQQDA L +E+ T+ IGATTENP FE+NSALLSR RV L+ L EDI Sbjct: 121 IDEIHRFSKSQQDALLHAVENRTVIMIGATTENPYFEVNSALLSRGRVVELEHLKDEDIA 180 Query: 172 QVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA--EVDDSGK 229 ++ +A+E G ++T + I L GDAR AL TLE+ +++A D G Sbjct: 181 TLIERALEAPQGLNGK--FSADEDTAKTICTLAAGDARSALTTLELASEIAVTRPDTEGT 238 Query: 230 RV--------LKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 + + + R +D GD YD+ISA KS+RGS PDA +YW AR+ Sbjct: 239 PAPAAGERYPITVDDVKIANPRRGFTYDKNGDMHYDIISAFIKSMRGSDPDATVYWLARM 298 Query: 282 ITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLA 341 I AG DP ++ARR + ASEDVGNADP+A+ VA AA+ +G E +AQA +Y+ Sbjct: 299 IDAGEDPKFIARRIMIHASEDVGNADPQALLVAHAAFKSAEVIGYPECRINLAQAALYVC 358 Query: 342 CAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAA 401 APKSNA + AALAD +VP +LR+ E G Y+Y HD + Sbjct: 359 LAPKSNACEASIDAALADIHSSGLREVPSYLRDRHRPGSDEYGV---YKYPHDYPEGWV- 414 Query: 402 GEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441 + Y P + + ++ P RG E W EQ + Sbjct: 415 DQRYLPEGLERGAFWQPAGRGWE-------EWRVEQSERD 447 >UniRef50_C0R1V7 Holliday junction resolvase helicase subunit-like ATPase n=2 Tax=Brachyspira RepID=C0R1V7_BRAHW Length = 431 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 167/428 (39%), Positives = 256/428 (59%), Gaps = 7/428 (1%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 N F+P+A RMRP + + GQ H+L K L + I+ + SM+ +GPPG GK+T+A +I Sbjct: 9 NNFKPMAERMRPLTIEEVFGQHHILDKNKTLRKMIDNDKITSMVFFGPPGVGKSTVASII 68 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A+ ++ +++AV S V EIREAI++A +N ++TILF+DE+HRFNKSQQDA LP + Sbjct: 69 AKKTKSEYIKLNAVLSNVSEIREAIKKAEKNLENRKKTILFIDEIHRFNKSQQDALLPAV 128 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E+G+I IG+TT NP F LN+ALLSR ++ ++L DI++ + +A+EDK RG G D+ Sbjct: 129 ENGSIILIGSTTLNPYFYLNNALLSRIMLFEFRNLDDNDIKEAVLKAIEDK-RGLGEYDV 187 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR-VLKPELLTEIAGERSARFD 249 + DE I +GD R+A LE ++D+S ++ + E++ ++ ++S FD Sbjct: 188 DVEDEAVNLIVRYSHGDVRKAFTYLEASYLATQIDESKEKLTITEEIVRDVTSKQSISFD 247 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 D Y+ ISA KSVRGS P+AA+Y+ AR++ +G DP YVARR +ASED+G A+P Sbjct: 248 --EDEHYNTISAFIKSVRGSDPNAAIYYLARMLESGEDPRYVARRLCILASEDIGLAEPN 305 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 AM +A + +G EG +A+ +YLA PKSN+ Y A A+ D R Y +P Sbjct: 306 AMNIASSLVSIIDFIGMPEGRIPLAEVTIYLALCPKSNSAYNAINKAIRDIRNGELYSIP 365 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 +LR+ + +EY+Y HD + Y + YY P + G E ++ + Sbjct: 366 NYLRDNHSATFDRKS-DEEYKYPHDYPYHIVKQD-YLEHGVK-KEYYEPVDIGEERELKK 422 Query: 430 KLAWLAEQ 437 + W+ + Sbjct: 423 RYEWIIKH 430 >UniRef50_Q75JU2 ATPase WRNIP1 n=2 Tax=Eukaryota RepID=WRIP1_DICDI Length = 876 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 173/427 (40%), Positives = 259/427 (60%), Gaps = 16/427 (3%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 +F +F PL+ +MRP L+ +IGQ+ LL + + ++ L S IL+GPPG GKTT Sbjct: 187 TNFKKKSFAPLSEQMRPTELSDFIGQESLLVGDPIVKKLFQSPELPSFILYGPPGCGKTT 246 Query: 66 LAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDA 125 LA+++A +N ++ +SAV SGVK+I+E I++AR G++TILF+DE+HR+NK QQD Sbjct: 247 LAQIVASKSNYNINALSAVGSGVKDIKEVIDKARNTLQFGKKTILFIDEIHRYNKLQQDV 306 Query: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY 185 LP IE G I IGATTENPSFELN ALLSR +V+ ++ L+ E++E ++ + +E T Sbjct: 307 LLPAIESGIIILIGATTENPSFELNGALLSRCKVFKMEKLTKENLETLIKRTLE-VTPLL 365 Query: 186 GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR--------------- 230 + +++ ++ +++AE+ +GDAR A+N L+M + + + K Sbjct: 366 MDRRLIMDEDAIKSLAEIADGDARVAINVLDMAIKANKEEQTYKERMEEKHSTSGIVRDI 425 Query: 231 VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLY 290 VL + + + S +D GD FY+LISALHKSVRGS +A YW R++ +G +PLY Sbjct: 426 VLTKKQMGSLLQRTSLIYDKGGDAFYELISALHKSVRGSDANATAYWVIRMLESGCEPLY 485 Query: 291 VARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY 350 + RR + +ASED+G AD A+ +AIAA+ VG E AI Q VYLA A KSN+ Sbjct: 486 IVRRMVRMASEDIGLADNSALPLAIAAYQAVHFVGMPECTNAILQCAVYLANAAKSNSCD 545 Query: 351 TAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI 410 + + VP+HLRNAPTK+MK+ GYG +Y+Y H + ++Y P I Sbjct: 546 HWYAHTREYLEKHEGPPVPIHLRNAPTKMMKDWGYGADYQYNHAFDDQSQVTQIYLPEPI 605 Query: 411 AQTRYYF 417 +++ Sbjct: 606 KNEKFFE 612 >UniRef50_C6IZU9 AAA ATPase central domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZU9_9BACL Length = 452 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 178/435 (40%), Positives = 261/435 (60%), Gaps = 13/435 (2%) Query: 2 SNLSLD-FSDNTFQP-----LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMIL 55 S+L +D FS N Q LA RMRP +L +YIGQ+H++ GK L RAIEA + S++L Sbjct: 12 SDLKVDLFSFNQEQSPAGRLLADRMRPTSLDEYIGQEHIVGPGKLLRRAIEADQVSSILL 71 Query: 56 WGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDE 114 +GPPG GKTTLA +I+ + A+ R++AV + VK++RE IE+A+ ++ G +TILF+DE Sbjct: 72 YGPPGCGKTTLAHIISHHTKAEFVRLNAVDASVKDVREVIEKAQNDKAFYGTKTILFLDE 131 Query: 115 VHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVL 174 VHRFN S+QDA LP +E GTI FIGATTENP +N AL+SR+ ++ L+ L+ E + Sbjct: 132 VHRFNSSRQDALLPAVEKGTIIFIGATTENPFHYVNGALMSRSTLFQLEPLTKEHSLIAM 191 Query: 175 TQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKP 234 +A+ D+ +G G + + +E IA + NGD RRALN LE+ A G + Sbjct: 192 RRALADQEKGLGFMPLQVDEEALLHIAAMANGDIRRALNALELAAMTTPPQPDGTVHITL 251 Query: 235 ELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA-GGDPLYVAR 293 E+ E + D YD++SA HKS+RGS+ DAA++W+ + G DP+ R Sbjct: 252 EVAEESIRRPLVKADESTQ--YDVLSAFHKSIRGSS-DAAVFWFLYAVEKLGMDPMTFIR 308 Query: 294 RCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAF 353 R +A +SED+G A+P+AM A++A + + G E I QAI++ +PKSNAV A Sbjct: 309 RLIAASSEDIGLANPQAMVQAVSALEAYRNNGWPEARLNIVQAILFAVESPKSNAVVEAI 368 Query: 354 KAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQT 413 A+A E +VP+HLR+ K ++G+ + Y+Y HD Y + Y P ++ Sbjct: 369 GNAMAAIEEVKSAEVPLHLRDTHYKGAAKLGH-EGYKYPHDYPGHYV-QQEYLPKRLSGR 426 Query: 414 RYYFPTNRGLEGKIG 428 +Y T +G E KI Sbjct: 427 TFYHATEQGNEAKIK 441 >UniRef50_A6QR70 Werner helicase interacting protein 1 n=6 Tax=Amniota RepID=A6QR70_BOVIN Length = 638 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 173/439 (39%), Positives = 244/439 (55%), Gaps = 37/439 (8%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA MRP+ L ++GQ + L +EA + S+ILWGPPG GKTTLA +IA Sbjct: 198 KPLADTMRPDALQDFVGQGRAVGPETLLRSLLEASEVPSLILWGPPGCGKTTLAHIIANN 257 Query: 74 ANA---DVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 + +SA ++ ++R+ I++A+ R R+TILF+DE+HRFNKSQQD FLPH Sbjct: 258 SKKHSIRFVTLSATSAKTTDVRDVIKQAQNEKRFFKRKTILFIDEIHRFNKSQQDTFLPH 317 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA------------ 177 +E GTIT IGATTENPSF++N+ALLSR RV +L+ L E + +L +A Sbjct: 318 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAVVTILMRAVNSLGIQVLDSS 377 Query: 178 -----MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM----------- 221 + +++ D+ +A L +GDAR LN L++ Sbjct: 378 RPADPLSHGGNSSSESSVLIEDKAVDTLAHLSDGDARAGLNGLQLAVLARLSARKTFGKK 437 Query: 222 -AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + + ++ + E +D G+ Y+ ISALHKS+RGS AALYW R Sbjct: 438 GGQSYPPSRVLVTESDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDSSAALYWLGR 497 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DPLYVARR + ASEDVG ADP A+ A+A + +G E E +AQ +VYL Sbjct: 498 MLEGGEDPLYVARRLVRFASEDVGLADPSALTQAVATYQGCHFIGMPECEVLLAQCVVYL 557 Query: 341 ACAPKSNAVYTAFKAALADAR--ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS VY+A+ A R + P VP+HLRNAPT+LMK++GYGQ Y+Y + Sbjct: 558 ARAPKSVEVYSAYNNVKACLRGHQGPLPPVPLHLRNAPTRLMKDLGYGQGYKYNPAYSEP 617 Query: 399 YAAGEVYFPPEIAQTRYYF 417 + Y P E+ ++ Sbjct: 618 --VEQEYLPQELRGVDFFK 634 >UniRef50_C5RHF7 AAA ATPase central domain protein n=11 Tax=Bacteria RepID=C5RHF7_CLOCL Length = 424 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 153/422 (36%), Positives = 235/422 (55%), Gaps = 4/422 (0%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA R+RP+ + + +GQ HL+ K L + IE+ H+ +MI +GPPG GKTT+A +IA+ Sbjct: 1 MKPLADRLRPQVIEEVVGQSHLIGQNKILTKIIESQHIPNMIFYGPPGCGKTTVANIIAK 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 N +++A + K+I+E I + +L++DE+ FNK QQ + L IE+ Sbjct: 61 ATNKRFFKLNATNASTKDIKEIILEL-DTFMGAKGVLLYLDEIQNFNKKQQQSLLEFIEN 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G+IT I +TTENP F + +A+LSR+ V+ K +S++DIE+ L +A+E + I+L Sbjct: 120 GSITLIASTTENPYFYVYNAILSRSNVFEFKMVSSDDIEKALMRAVEVLQNDFKSSKILL 179 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 DE + I+ + GD R+ALN LE+ ++ D + + + FD G Sbjct: 180 EDEALKYISAIAGGDVRKALNALELAVFSSKAKD-NIIKIDINAAYDATQRKIMNFDKDG 238 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD++SA KS+RGS DAA+++ AR+I GGD L + RR + IA ED+G A P A+ Sbjct: 239 DGHYDVLSAFQKSIRGSDADAAVHYLARLI-RGGDLLSICRRLMVIACEDIGLAFPSAIS 297 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + + D ++G E +A+A + LA +PKSN+ A +ALAD + D+P HL Sbjct: 298 IVKSCVDSALQLGFPEARIPLAEATILLATSPKSNSAIVAIDSALADIDNKDIGDIPYHL 357 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +++ K +G+G Y Y H N Y + Y P I YY N E I L Sbjct: 358 KDSHYKGADTLGHGVGYLYPHSFENNYVKQQ-YLPDNIKNAIYYKAGNNKFENNIKMYLN 416 Query: 433 WL 434 L Sbjct: 417 KL 418 >UniRef50_A5GNS9 ATPase related to the helicase subunit of the Holliday junction resolvase n=46 Tax=cellular organisms RepID=A5GNS9_SYNPW Length = 737 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 182/418 (43%), Positives = 260/418 (62%), Gaps = 4/418 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP NL +++GQ +LA G+ L RAI A + ++IL GPPG GKTTLA +IA + Sbjct: 23 PLADRLRPRNLDEFVGQGAILAEGRLLRRAIAADRVGNLILHGPPGVGKTTLARIIANHT 82 Query: 75 NADVERISAVTSGVKEIR-EAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AV +GVK++R E E ++ G RTILF+DEVHRFN +QQDA LP +E+G Sbjct: 83 RAHFSSLNAVLAGVKDLRAEVSEAGQRLERHGLRTILFIDEVHRFNSAQQDALLPWVENG 142 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+T IGATTENP FE+N AL+SR+R++ L++L+ D+ ++L A++D RGYG + I + Sbjct: 143 TLTLIGATTENPYFEVNKALVSRSRLFRLQALTPGDLSKLLNSALKDPERGYGDRKIKIE 202 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 E + ++ +GDAR LN LE+ D D++G + + E +R+ +D +GD Sbjct: 203 PEAAAHLVDVASGDARSLLNALELAVDSTPADENGLVRIDLGIAEESIQQRAVLYDKQGD 262 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 +D ISA KS+RGS PDAAL+W AR++ AG +P ++ RR L A EDVG ADP+A+ V Sbjct: 263 AHFDTISAFIKSIRGSDPDAALFWLARMVEAGENPRFIFRRMLISAGEDVGLADPQAVVV 322 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A F R+G EG +AQA +YLA KSN+ F AL R DVP HLR Sbjct: 323 VEACAAAFERIGLPEGLYPLAQAALYLAGTDKSNST-GGFFEALRQVRSAQRQDVPTHLR 381 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 +A + G GQ YRY H + A + Y P + ++ P+++G EG+ E++ Sbjct: 382 DA-NRDGDAFGDGQGYRYPHAFREHWVAQQ-YLPDALQGEAFWAPSHQGWEGQRRERI 437 >UniRef50_Q1D8G6 ATPase, AAA family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D8G6_MYXXD Length = 444 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 180/432 (41%), Positives = 259/432 (59%), Gaps = 6/432 (1%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 N F PLA RMRP ++IGQ HLL G+PL + IE + S + WGPPG GKTTLA ++ Sbjct: 15 NRFAPLAERMRPRTPDEFIGQSHLLGPGRPLRQLIERKAIVSSLFWGPPGVGKTTLARMM 74 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQDAFLPH 129 A +A+ +SAV+ G+ IRE + A + RN RRT+LFVDE+HR+ K+ Q+ LPH Sbjct: 75 ATGVDAEFVILSAVSDGIPRIREVVAEAERLRNQYSRRTVLFVDEIHRWAKNVQEQALPH 134 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E G +GATTEN SFE+ AL+SR RV+ LK L+ DI+ LT+A+ D RG G ++ Sbjct: 135 VESGLFVLLGATTENVSFEVRPALVSRCRVFQLKELTVADIQSALTRALGDSKRGLGARN 194 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 + + + +A+ GD R+AL LE+ A + + + PE E G +R D Sbjct: 195 LSVGEGALTLLAKGGVGDVRKALGALELAASLT----ADGAEITPETAREAVGTSLSRHD 250 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 GD+ YDL+SAL KS RGS A++W A+++ G D + RR IA EDVG A P Sbjct: 251 KDGDQHYDLLSALQKSCRGSNVQGAVFWAAKLLQTG-DVASLWRRLKVIAVEDVGMAMPE 309 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ V + F +G EG +A A+V LA A KSN Y A AALA +E P+ + P Sbjct: 310 AISVVRDCEEAFHAMGMPEGRICVAHAVVLLATAKKSNRAYAALDAALAALQEHPNAEPP 369 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 +H+RNAPT+LMKE+G+G+ Y+ + + Y G+ Y P + ++ +Y P+ G E +I E Sbjct: 370 LHIRNAPTELMKELGHGKGYQTPWNFKDHYVPGQTYLPAPLERSVFYRPSKEGYEAEIHE 429 Query: 430 KLAWLAEQDQNS 441 +++ +D+ S Sbjct: 430 RMSHWWREDKAS 441 >UniRef50_Q0EY57 ATPase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY57_9PROT Length = 448 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 192/441 (43%), Positives = 268/441 (60%), Gaps = 15/441 (3%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 + N++ D S PLA R+RP L GQ L AA + G S I WGPPG Sbjct: 11 LDNIASDVS----IPLAYRIRPAVLQDVAGQPDLTAADSWFSTMVSEGRCCSCIFWGPPG 66 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 GKTTLA V+A A ++SAV++G E+++ ++RAR +AG+ +LF+DE+HRFNK Sbjct: 67 VGKTTLATVMADAAGIPFVQLSAVSAGKAEVQDVVKRAR---SAGQTWLLFLDEIHRFNK 123 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +QQD LP IEDGT+ +GATTENPSF LN+ALLSR RV +L++L D+ +L +A Sbjct: 124 AQQDVLLPCIEDGTLVLVGATTENPSFSLNNALLSRCRVIVLQALQASDVAVILKRAC-- 181 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 + G + L D+ +AE +GDAR ALN LE + +R + + + Sbjct: 182 RYLGDQAKAFSLDDDALVWLAENSDGDARYALNALESLFQA-----DAERCWSLQAVQQQ 236 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 + R+AR+D GD YDLISALHK +R S PDAA+YW AR++ AG PLY+ARR + +A+ Sbjct: 237 SLRRAARYDRDGDAHYDLISALHKCIRDSDPDAAVYWLARMLEAGEQPLYIARRLIRMAT 296 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 ED+G ADP+A+ +A+ A F +G EGE+ + +A +YLA + KSNA Y A K A A Sbjct: 297 EDIGLADPKALNIALDAHRMFEILGSPEGEQGLFEAAIYLALSAKSNAAYMAEKEARKLA 356 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 +VP+HLRNAPT+LM+++G+G YRYAHDE N + +FP E+ + Y P Sbjct: 357 GLTRAAEVPMHLRNAPTRLMQQLGHGAGYRYAHDEENG-VVDQRHFPTELGRPTLYRPVA 415 Query: 421 RGLEGKIGEKLAWLAEQDQNS 441 RG E + E++ WL Sbjct: 416 RGFERTLRERIDWLKAARHGK 436 >UniRef50_B5JJN9 ATPase, AAA family protein n=2 Tax=Verrucomicrobia RepID=B5JJN9_9BACT Length = 496 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 175/430 (40%), Positives = 248/430 (57%), Gaps = 10/430 (2%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 N QPLAAR+RP +L++ +GQ+H+LA GK LPR +EA S++ +GPPG GKT++AE Sbjct: 70 SNKRQPLAARLRPRSLSEVVGQEHILAPGKLLPRLVEANTFGSLLFYGPPGCGKTSMAEA 129 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 IA + RI+AV S V E+RE + AR R + T+LF+DE+HRFNKSQQD LP Sbjct: 130 IAGETKSRFVRINAVMSNVAELREILGIAR--RMEDKDTVLFIDEIHRFNKSQQDLLLPD 187 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E G I IGATT NP F +N+ LLSR+ ++ L + + L +A+ D+ RG G + Sbjct: 188 VEAGNIRLIGATTHNPGFYVNAPLLSRSHLFRLNPHDVDTVAATLAKALTDEERGLGERK 247 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 I +A+L +GD RR LN LE++A E + E + A ER R+D Sbjct: 248 ITAVAGVLEGLAKLCDGDLRRGLNALEVIAMGLEEGGE----ITEESVGVFASERQIRYD 303 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 D YD ISA KS+RG +PD ALYW A+++ G DP ++ARR + ASEDVG AD Sbjct: 304 ADEDEHYDTISAFIKSMRGGSPDGALYWLAKMLKGGEDPRFIARRLVVFASEDVGLADSG 363 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ +A+A VG E +A + Y+A APKSN+ Y+A ALA P +VP Sbjct: 364 ALSLAVATQQACDFVGMPECRINLAHCVSYMAAAPKSNSAYSALAKALAAIEAGPVQEVP 423 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 + LR+ K K +G ++YRY+HD A +G+ Y + R+ G E +I + Sbjct: 424 LWLRDKGGKASKALGNSKDYRYSHDFAENI-SGQEYM---VEPMRFLELNRVGEETEIAK 479 Query: 430 KLAWLAEQDQ 439 +L + + Sbjct: 480 RLDRWEKLKK 489 >UniRef50_Q47N55 Recombination protein MgsA n=6 Tax=Bacteria RepID=Q47N55_THEFY Length = 441 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 187/434 (43%), Positives = 261/434 (60%), Gaps = 8/434 (1%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 + + +PLA RMRP L + +GQ+HLL G PL R +E +++LWGPPGTGKTTLA Sbjct: 13 AHRSHEPLAVRMRPRTLDEVVGQRHLLGEGSPLRRLVEDDAPMALLLWGPPGTGKTTLAT 72 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFL 127 V++R +SAVTSGVK+IR+ ++ AR+ G T+LFVDEVHRF+K+QQDA L Sbjct: 73 VVSRATRRRFVELSAVTSGVKDIRDVVDEARRELGMRGVHTLLFVDEVHRFSKTQQDALL 132 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 P +E+ ++FIGATTENP F + S LLSR+ + L + S +DI V+ +A+ D+ RG G Sbjct: 133 PAVENRWVSFIGATTENPFFSVISPLLSRSLLLTLHAHSDDDIRTVVRRALTDE-RGLAG 191 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + L +E + L GDARR+L LE A +A + + + A + R Sbjct: 192 R-YTLTEEALHHLVRLAGGDARRSLTYLEAAALVA----GDRTEITVADVERAADRTAVR 246 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D GD+ YD++SA KS+RGS DAAL++ AR+I AG DP ++ARR + ASEDVG AD Sbjct: 247 YDRSGDQHYDVVSAFIKSMRGSDVDAALHYLARMIEAGEDPRFIARRLVVHASEDVGMAD 306 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+Q A+AA VG E +AQA++++A APKSNAV TA A++D R Sbjct: 307 PTALQAAVAAAQAVELVGLPEARINLAQAVIHIALAPKSNAVITAIDRAISDVRAGKLGP 366 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP HLR++ + ++G+G YRY HD A + Y P + YY PT G E + Sbjct: 367 VPAHLRDSHYRGAADLGHGAGYRYPHDYPGGVVA-QRYLPEGLDGAEYYRPTTHGAERRF 425 Query: 428 GEKLAWLAEQDQNS 441 GE L + + Sbjct: 426 GEVLRRIKGVLRGG 439 >UniRef50_B2KBM0 AAA ATPase central domain protein n=2 Tax=Elusimicrobia RepID=B2KBM0_ELUMP Length = 416 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 178/441 (40%), Positives = 250/441 (56%), Gaps = 28/441 (6%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 M ++ D PLAA M P+NL + GQ+H++ G+ L R IE+ + S + +GPPG Sbjct: 1 MEDIKHDM------PLAAAMAPKNLDDFAGQKHVIGPGRMLRRMIESDTIKSAVFFGPPG 54 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAG---RRTILFVDEVHR 117 GKT LA IA A ++A +GV +I++ IE A++ RN +RT++ +DE+H Sbjct: 55 VGKTALARFIASKTEAVTVELNAAAAGVGDIKKVIEEAKERRNDTFLEKRTLVVLDEIHH 114 Query: 118 FNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 FNK+QQD LP +E G I IG TTENP F +N+ALLSR V+ K L +D+EQ+L + Sbjct: 115 FNKTQQDVLLPSVERGDIILIGLTTENPYFYINNALLSRFSVFEFKPLDAKDLEQILKRV 174 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELL 237 ++ K + + + + NGDARR LN +++ D G + ++ Sbjct: 175 LKIK-------EAKIQKDAKDFFITQANGDARRLLNAVDLAILTTAKDSDGIVNITMDVA 227 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E +R +D KGD YD+ISA KS+RGS PDAA+YW AR++ +G DP ++ARR L Sbjct: 228 KECMQKRHLNYDKKGDEHYDVISAFIKSMRGSDPDAAVYWLARMLESGEDPRFIARRILI 287 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVGNA+P A+ +A AA+ C +G E +AQA +Y+ACAPKSNA Y A AL Sbjct: 288 CASEDVGNAEPAAIMLAEAAFKCAEVLGMPEVRIPLAQAAIYVACAPKSNASYIAVDEAL 347 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 + RE VP HLR K + Y+YAHD N Y E Y P ++Y Sbjct: 348 KEVREGIQRRVPAHLR----SGFKN----EGYKYAHDYPNHYVKQE-YMP---KPKKFYE 395 Query: 418 PTNRGLEGKIGEKLAWLAEQD 438 PT G E I E+L L ++ Sbjct: 396 PTEIGKEKNIKERLKKLKGEE 416 >UniRef50_D2RB58 Recombination factor protein RarA n=2 Tax=Gardnerella vaginalis RepID=D2RB58_GARVA Length = 462 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 186/447 (41%), Positives = 262/447 (58%), Gaps = 15/447 (3%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAI---EAGHL---HSMILWGPPGTGK 63 N +PLA RMRP ++ +GQ H L G PL R G L S++L+GPPG GK Sbjct: 13 SNVTRPLAVRMRPSSIEDVLGQSHALKEGSPLRRLANPQSKGSLTAPSSVVLFGPPGVGK 72 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQ 122 TTLA ++AR + E +SAVTSGVK++R ++RA + + G+ T+LF+DEVHRF+KSQ Sbjct: 73 TTLAYIVARQSGRVFEELSAVTSGVKDVRAVLDRAHERLVSNGQETVLFIDEVHRFSKSQ 132 Query: 123 QDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT 182 QDA LP +E+ +TFIGATTENPSF + LLSR+ V L SLS ED+ ++ +A+ + Sbjct: 133 QDALLPSVENRDVTFIGATTENPSFSIIKPLLSRSVVVKLASLSVEDLHTLIERALTSEN 192 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA-----DMAEVDDSGKRVLKPELL 237 I L GDAR+ L LE A D+A K V+ +++ Sbjct: 193 GLNNQLKIDDDAIDSII--RLSGGDARKTLTILEAAAGAVTGDVALQHGKKKPVITDDIV 250 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 + + + R+D GD YD+ISA KS+RGS DA+L++ AR++ AG DP ++ARR + Sbjct: 251 SNVMDTTTVRYDKDGDDHYDVISAFIKSMRGSDVDASLHYLARMLRAGEDPRFIARRIMI 310 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 A+E+VG A P+ +QV +AA +G E +++A++ +A APKSNA Y A AL Sbjct: 311 AAAEEVGMAAPQILQVTVAAAQAVALIGMPEARIILSEAVIAVATAPKSNASYNAINKAL 370 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 D VP+HLRNAPT LMK G Y+YAHD A A+ + Y P E+ YY Sbjct: 371 QDVDAGNIGQVPLHLRNAPTALMKSWGNHDGYKYAHDYPGAVASQQ-YMPDELVGREYYQ 429 Query: 418 PTNRGLEGKIGEKLAWLAEQDQNSPIK 444 P+NRG E ++ ++L+ + NS K Sbjct: 430 PSNRGYEHELTQRLSQIRAILHNSENK 456 >UniRef50_Q17P00 Werner helicase interacting protein n=3 Tax=Endopterygota RepID=Q17P00_AEDAE Length = 560 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 178/432 (41%), Positives = 249/432 (57%), Gaps = 28/432 (6%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 + + PLA +MRP+ L+ YIGQ+ ++ L E + SMILWGPPG GKTTLA Sbjct: 131 EEGSNIPLAEKMRPDELSDYIGQEQIIGKNTVLRTLFEKNTIPSMILWGPPGCGKTTLAH 190 Query: 69 VIARYANAD----VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQD 124 +IA + ++SA SGV +++EA++ A+ + R+TI+F+DE+HRFNK QQD Sbjct: 191 IIAAHCKKHGSMKFVKLSATMSGVNDVKEAVKLAKNDLAFKRKTIMFMDEIHRFNKLQQD 250 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 FLPH+E GTIT IGATTENPSF LNSALLSR RV +L+ L E + ++L +A+ Sbjct: 251 IFLPHVESGTITLIGATTENPSFSLNSALLSRCRVIVLEKLGVEAVMKILKRALPQYKTV 310 Query: 185 YGGQDIVLPD--------------ETRRAIAELVNGDARRALNTLEMMADMAEV----DD 226 + +PD ET R +AE+ +GDAR ALN+L++ + ++ Sbjct: 311 MFENNNRVPDIRGLPFVPRMMISAETIRWLAEICDGDARIALNSLQLALNTVAARQDEEE 370 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 S + + + + E + +D KGD+ Y+LISALHKS+R S +AALYW +R++ +G Sbjct: 371 SALKRISLDEIKEGIKKSHLMYDRKGDQHYELISALHKSIRASDDNAALYWCSRMLVSGE 430 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 DP Y+ RR + +ASED+G AD A+ VA + VG E + IA VYLA APKS Sbjct: 431 DPRYLVRRMIRMASEDIGLADTNALTVATSTLAAVQAVGMPEADCIIAHCAVYLARAPKS 490 Query: 347 NAVYTAFKAALADA--RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEV 404 VY AF A + P VP+HLRNA TKLMK + YG Y H + + Sbjct: 491 REVYNAFNRCKASIGQNKGPMPSVPLHLRNATTKLMKSLKYGAGYNLQHKDESGL----Q 546 Query: 405 YFPPEIAQTRYY 416 Y P + Y+ Sbjct: 547 YMPEGLENENYF 558 >UniRef50_B1ZVQ2 AAA ATPase central domain protein n=10 Tax=Bacteria RepID=B1ZVQ2_OPITP Length = 448 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 181/425 (42%), Positives = 248/425 (58%), Gaps = 10/425 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLAARMRP LA+ +GQ H+L G LPR + S+I +GPPG GKT++AE IA+ Sbjct: 27 QPLAARMRPRRLAEVVGQSHILKPGSLLPRLVAQNRFGSLIFYGPPGCGKTSIAEAIAQE 86 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N+ R++AV S V E+RE + AR+ A TILF+DE+HRFNKSQQD LP +E+G Sbjct: 87 TNSRFVRVNAVMSNVAELREILHSARRLPQAS--TILFIDELHRFNKSQQDLLLPDVEEG 144 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+ IGATT NP F +N LLSR+ ++ L+ LS + VL +A+ D+ RG G + + Sbjct: 145 TVRLIGATTHNPGFYVNPPLLSRSHLFRLEPLSPAAVTGVLKKALADEERGLGARKVTAD 204 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ +A L +GD RRALN LE++ + V+ P L A ER R+D D Sbjct: 205 DKVLADLAVLCDGDLRRALNALEVLV----LGLPEGGVITPAELEVFARERRIRYDADED 260 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KS RGS PDAALYW A+++ G DP ++ARR + +ASEDVG ADP+A+ + Sbjct: 261 EHYDTISAFIKSCRGSDPDAALYWLAKMLAGGEDPRFIARRLVILASEDVGLADPQALPL 320 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +AA +G E E +A A +Y+A A KSN+ A A +E+P +P LR Sbjct: 321 TVAAHHAVDFIGLPEAELTLAHATLYIATAAKSNSATLALGEAHRALKEQPVQTIPAALR 380 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + + K +G GQ Y Y+HD +G+ Y + Y P G E KI ++LA Sbjct: 381 SKSGQANKRIGQGQGYLYSHDHQENI-SGQDYLEKPL---TLYTPKPVGWEAKIVDRLAR 436 Query: 434 LAEQD 438 E Sbjct: 437 WKELK 441 >UniRef50_B2W7D9 DNA-dependent ATPase MGS1 n=2 Tax=Leotiomyceta RepID=B2W7D9_PYRTR Length = 534 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 166/411 (40%), Positives = 237/411 (57%), Gaps = 15/411 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L GQ+ L+ L ++ G L SM+LWG PGTGKTT+A +IA + Sbjct: 118 PLAERMRPMSLEHVYGQE-LVGPKGILRAMVDEGRLPSMVLWGRPGTGKTTIARLIANTS 176 Query: 75 NADVERISAVTSGVKEIREAI-ERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + I++ ++ ++++R E ++ R GR+TI+F DE+HRF+K+QQDAFL +E G Sbjct: 177 GSRFVEINSTSTRLEQVRAIFTEASQDLRLTGRKTIVFCDELHRFSKTQQDAFLGPVESG 236 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TIT I ATTENPSF++ SALLSR R + L L +D+ ++L +AM ++ +L Sbjct: 237 TITLIAATTENPSFKIISALLSRCRTFTLDDLKEDDLVKILERAMTAESCT----SPILD 292 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 A +GDAR ALN LE+ +A D K ++ L + +D GD Sbjct: 293 KPMLAYFARFSDGDARTALNLLELAMSLANQPDMTKEKIQQSLTKTLV------YDRAGD 346 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD ISALHKS+RGS P A+LY+ AR++ +G DP Y+ARR + +ASEDVG AD + + Sbjct: 347 QHYDSISALHKSIRGSDPHASLYYLARMLESGEDPRYIARRLIVVASEDVGLADNSMLSL 406 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP--DYDVPVH 371 A A + +G E +A A+ L APKS VY K A+ +E +P H Sbjct: 407 ATATYAACENIGMPECRINLAHAVTALTLAPKSTRVYRGLKNAIDAVKEPGMAALPIPHH 466 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 +RNAPTKLMK+MGYG Y+Y + + E Y P + + T+ G Sbjct: 467 IRNAPTKLMKDMGYGDGYKYNPNYLDGKVKQE-YLPEALRGRSFLEETDLG 516 >UniRef50_D2AWQ0 Recombination factor protein RarA n=3 Tax=Bacteria RepID=D2AWQ0_STRRD Length = 436 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 194/440 (44%), Positives = 269/440 (61%), Gaps = 10/440 (2%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 + + + + +PLA RMRP L + IGQ+HLL G PL R +EA S+ LWGPPGTG Sbjct: 6 DSAAEEAHRGHEPLAVRMRPRGLDEVIGQRHLLGPGTPLRRLVEAEAPMSLFLWGPPGTG 65 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKS 121 KTTLA V+A +SAV++GVKE+R AIE+AR+ +GR+T+LFVDEVHRFNK+ Sbjct: 66 KTTLAYVVAGVTKRRFVEVSAVSAGVKEVRAAIEQARRELGMSGRQTVLFVDEVHRFNKA 125 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDA LP +E+ +TFIGATTENP F + S LLSR+ + L+SLS +DI VL +A+ D Sbjct: 126 QQDALLPAVENRWVTFIGATTENPFFSVISPLLSRSLLLTLESLSEDDIRMVLERAVAD- 184 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 RG G+ L E + L GDARR+L LE + +A+ + + E++ Sbjct: 185 PRGLDGKA-KLAPEAAEHLVRLAGGDARRSLTYLEAASLIADGE------ITVEVVERAV 237 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 + + R+D +GD+ YD+IS KS+RGS DAAL++ AR++ AG DP ++ARR + ASE Sbjct: 238 DKAAVRYDRQGDQHYDVISGFIKSMRGSDADAALHYLARMVEAGEDPRFIARRIVIFASE 297 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG ADP +QVA+AA +G EG +AQA+++ A APKSNAV A AA D R Sbjct: 298 DVGMADPTCLQVAVAAAQAVEFIGLPEGRLNLAQAVIHCALAPKSNAVINAIGAASEDVR 357 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 VP HLR+A K++G+G+ Y+Y HD + + Y P E+ RYY PT Sbjct: 358 RGSIGHVPAHLRDAHYGGAKKLGHGKGYKYPHDFEHGLVRQD-YAPEELRDRRYYQPTRH 416 Query: 422 GLEGKIGEKLAWLAEQDQNS 441 G E ++ + + + Sbjct: 417 GAEAAFADRWSRIRSFLRGQ 436 >UniRef50_C8XD35 AAA ATPase central domain protein n=21 Tax=Actinobacteridae RepID=C8XD35_NAKMY Length = 494 Score = 476 bits (1225), Expect = e-133, Method: Composition-based stats. Identities = 182/440 (41%), Positives = 254/440 (57%), Gaps = 12/440 (2%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 + PLAARMRP L + +GQQHLL G PL R ++ G SM+L+GPPGTGKTTLA ++ Sbjct: 38 DPHAPLAARMRPRTLDEVVGQQHLLGPGAPLRRLVQGGAPSSMLLYGPPGTGKTTLATLV 97 Query: 71 ARYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 A ++SAV++GVKE+R I A + R G +T+LF+DEVHRF+++QQD+ L Sbjct: 98 AGSTGRFFAQLSAVSAGVKEVRAVIAEATTRLRRTGEQTVLFIDEVHRFSRTQQDSLLGA 157 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +ED TI + ATTENP F + S LLSR+ + L+ L+ DI +++ +A+ D+ G Sbjct: 158 VEDRTIVLVAATTENPFFSVVSPLLSRSLILQLQPLTDTDISELIDRAVADERGLAGA-- 215 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADM--------AEVDDSGKRVLKPELLTEIA 241 L + R + L GDARRAL LE A+ ++ D +G + + + Sbjct: 216 FTLAEPARAHLVALAGGDARRALTALEASAESVRELDAPDSDDDPAGVLEIDLDAVERAV 275 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 + R+D GD+ YD+ SA KS+RGS DAAL++ AR+I AG DP ++ARR + ASE Sbjct: 276 NRAAVRYDRSGDQHYDVTSAFIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMVHASE 335 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG ADP A+ A+AA VG E A+AQ ++L+ APKSNAV TA AA+AD R Sbjct: 336 DVGMADPTALPAAVAAAQVVQLVGLPEARIALAQVTIHLSTAPKSNAVITAIDAAMADVR 395 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 E VP LR+ + +G+ Q Y Y H A A + Y P E+ YY PT Sbjct: 396 EGRAGSVPPALRDGHYPGAQRLGHAQRYVYPHGRPGAVVAQQ-YPPDELVGRDYYRPTGF 454 Query: 422 GLEGKIGEKLAWLAEQDQNS 441 G E + E++ L + Sbjct: 455 GAERVLAERVPKLRRTIRGQ 474 >UniRef50_C4R299 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome n=1 Tax=Pichia pastoris GS115 RepID=C4R299_PICPG Length = 525 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 168/419 (40%), Positives = 236/419 (56%), Gaps = 28/419 (6%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L +Y+GQ HL+ L + GKT+LA +IA Sbjct: 111 PLAERLRPKTLEEYVGQSHLVGPTGVLRGS----------------NGKTSLARIIAAST 154 Query: 75 NADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + +SA +SG+ E R+ E AR R RRT+LF DE+HRFNKSQQDAFLP++E G Sbjct: 155 HNRCVELSATSSGISECRKVFEEARNEMRLTKRRTVLFCDEIHRFNKSQQDAFLPYVERG 214 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKTRGYGGQD 189 I IGATTENPSF+LNSALLSR RV++L L ED+ +V+ +++ + Y Sbjct: 215 DIILIGATTENPSFQLNSALLSRCRVFVLNKLDNEDLAKVVNRSLLLVNRVRKLVYNMPV 274 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS---GKRVLKPELLTEIAGERSA 246 + L E+ + I + GD+R ALN +EM+ + +D + P L E+ A Sbjct: 275 LRLTTESLQYIIGVAGGDSRTALNLVEMVDSHYQKNDDTTAASVEVDPSTLREVLRSTHA 334 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 +D GD+ YD ISA HKSVRGS DA LY+ AR++ G DPLY++RR + +ASED+G Sbjct: 335 VYDRVGDQHYDAISAFHKSVRGSNVDATLYYLARMLHGGEDPLYISRRMIRMASEDIGVV 394 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 D + A+A +D +VG E + +A LA A KS ++Y A+ A + ++ Sbjct: 395 DDSCLPFAVATFDAVHKVGLPEADVMLAHCAYKLATAAKSVSIYRAWNKVKAKVAQDANF 454 Query: 367 ---DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 +P+HLRNAPTKLM+E+GY + Y+Y D E Y P EI +Y + G Sbjct: 455 AGAPIPMHLRNAPTKLMEELGYSKGYKYNPDFKEGKVVQE-YLPSEIKDETFYEDRHLG 512 >UniRef50_Q50739 Uncharacterized AAA domain-containing protein Rv2559c/MT2636 n=53 Tax=Bacteria RepID=Y2559_MYCTU Length = 452 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 178/435 (40%), Positives = 261/435 (60%), Gaps = 6/435 (1%) Query: 7 DFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTL 66 D + PLA RMRP +L + +GQ HLLA G PL R +E + S+IL+GPPG+GKTTL Sbjct: 22 DLGASAGAPLAVRMRPASLDEVVGQDHLLAPGSPLRRLVEGSGVASVILYGPPGSGKTTL 81 Query: 67 AEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAF 126 A +I++ E +SA+++GVKE+R IE +R+ G +T+LF+DEVHRF+K+QQDA Sbjct: 82 AALISQATGRRFEALSALSAGVKEVRAVIENSRKALLHGEQTVLFIDEVHRFSKTQQDAL 141 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 L +E + + ATTENPSF + + LLSR+ + L+ L+ ED V+ +A++D RG G Sbjct: 142 LSAVEHRVVLLVAATTENPSFSVVAPLLSRSLILQLRPLTAEDTRAVVQRAIDD-PRGLG 200 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSA 246 + + + E + +L GDARRAL + AE + ++ + + + + Sbjct: 201 -RAVAVAPEAVDLLVQLAAGDARRALT---ALEVAAEAAQAAGELVSVQTIERSVDKAAV 256 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 R+D GD+ YD++SA KSVRGS DAAL++ AR++ AG DP ++ARR + +ASED+G A Sbjct: 257 RYDRDGDQHYDVVSAFIKSVRGSDVDAALHYLARMLVAGEDPRFIARRLMILASEDIGMA 316 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 P A+QVA+AA +G E + +A A ++LA APKSNAV TA AA+ D + Sbjct: 317 GPSALQVAVAAAQTVALIGMPEAQLTLAHATIHLATAPKSNAVTTALAAAMNDIKAGKAG 376 Query: 367 DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGK 426 VP HLR+ +G Q Y+Y+HD+ + A + Y P E+ YY PT RG E + Sbjct: 377 LVPAHLRDGHYSGAAALGNAQGYKYSHDDPDGVVAQQ-YPPDELVDVDYYRPTGRGGERE 435 Query: 427 IGEKLAWLAEQDQNS 441 I +L L + Sbjct: 436 IAGRLDRLRAIIRKK 450 >UniRef50_A5V4N3 Recombination protein MgsA n=171 Tax=Bacteria RepID=A5V4N3_SPHWW Length = 481 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 195/425 (45%), Positives = 272/425 (64%), Gaps = 11/425 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP LA IGQ+HL + R + AG L S++LWGPPGTGKTT+A ++A Sbjct: 63 PLAERLRPRTLADVIGQEHLTGPEGAIGRMVAAGRLSSLVLWGPPGTGKTTIARLLADAV 122 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 +SAV SGV ++++ AR++ G RT+LFVDE+HRFN++QQD+FLP++EDGT Sbjct: 123 GLRFAPVSAVFSGVADLKKIFAEAREHARIGTRTLLFVDEIHRFNRAQQDSFLPYVEDGT 182 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 + +GATTENPSFELN+ALLSRA+V +L L + +++ +A E + R + L + Sbjct: 183 VVLVGATTENPSFELNAALLSRAQVLILNRLDAAALGKLIARAEEIEER-----ALPLTE 237 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 R A+ +GD R LN E + +A L+P L + R A +D + Sbjct: 238 GAREALVASADGDGRFLLNQAETLFSIAI-----DHPLEPGELAALLHRRMAVYDKDREG 292 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 Y+LISALHKS+RGS P AALY+ AR++TAG +PLYV RR + ASED+G ADP+A+ Sbjct: 293 HYNLISALHKSLRGSDPQAALYYLARMLTAGEEPLYVLRRLVRFASEDIGLADPQALVQC 352 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 +AA D + +G EGE AI QA +YLA APKSNA Y A KAA A++ P ++ N Sbjct: 353 LAAKDAYDFLGSPEGELAIVQACLYLATAPKSNAAYAAQKAAFRSAKDTGSLMPPKNILN 412 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 APT+LMK++GYG+ Y Y HD +A+ +G+ Y+P E+A +Y P+ RG E KI E++A+ Sbjct: 413 APTRLMKDVGYGKGYAYDHDAEDAF-SGDDYWPEEMAPQSFYVPSPRGFEAKIAERIAYW 471 Query: 435 AEQDQ 439 Q Sbjct: 472 DRLRQ 476 >UniRef50_Q6BHR7 DEHA2G16302p n=8 Tax=Saccharomycetales RepID=Q6BHR7_DEBHA Length = 786 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 171/465 (36%), Positives = 246/465 (52%), Gaps = 41/465 (8%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP++L +Y GQ+ L+ L I++ + S ILWG PG GKT+LA +I++ + Sbjct: 193 PLAQRLRPKSLDEYYGQEKLVGENGILKNIIKSDQIPSFILWGVPGVGKTSLARIISQTS 252 Query: 75 NADVERISAVTSGVKEIREAIERA-RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N +S K +RE A + R GR+TILF+DE+HRFNK+ QD LP IE G Sbjct: 253 NCKFLEVSGAEGNAKRLREVFTMADNERRLTGRKTILFLDEIHRFNKAVQDLLLPVIEKG 312 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKTRGYGGQD 189 +T IGATTENPSF LN+ALLSR ++++ L EDI +++ + + + + +G Sbjct: 313 IVTVIGATTENPSFTLNNALLSRMHTFIMEPLLKEDIVKIINRGLLVVNKSRKLVFGLHL 372 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAE-------------------VDDSGKR 230 I L + IA L GD+R ALN LE + G Sbjct: 373 IALDKDAIDYIASLSAGDSRVALNILESINAYLSSVQYSRFSGYEEGEKAIQIPKTLGVI 432 Query: 231 VLKPELLTEIAGERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP 288 + + L + R+ + +D +G+ YD ISA HKSVRGS DAA+++ +++ G DP Sbjct: 433 KVCLQNLKPLLETRNYQKMYDKQGESHYDTISAFHKSVRGSDADAAVFYLVKMLVGGEDP 492 Query: 289 LYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNA 348 L++ARR + IASEDVG D + AIA + VG EGE +A LA APKS Sbjct: 493 LFIARRMIVIASEDVGLRDSSCLPFAIATKEALEFVGMPEGEIILAHCATKLARAPKSTK 552 Query: 349 VYTAFKAALADARERPD---YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY 405 Y A ++A + +E PD +P+HLRNAPTKLMKE GYG Y+Y + + Y Sbjct: 553 SYRALRSAQSLFKENPDTTSIPIPLHLRNAPTKLMKEFGYGDNYKYNPSFTHGKVKQD-Y 611 Query: 406 FPPEIAQTRYYFPTNRG-----------LEGKIGEKLAWLAEQDQ 439 P E+ ++ T+ G E E+ +L + + Sbjct: 612 MPKELRNVKFMEETHLGTTNDPSVDSYDYEMLSQERNDYLNFKRK 656 >UniRef50_Q6A8J0 Uncharacterized ATPase related to the helicase subunit of the holliday junction resolvase n=8 Tax=Actinobacteridae RepID=Q6A8J0_PROAC Length = 461 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 193/438 (44%), Positives = 263/438 (60%), Gaps = 6/438 (1%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 S SLD + N PLA R+RP + + +GQQHLL G PL R E S+ LWGPPG Sbjct: 18 SGGSLD-TPNPDAPLAVRLRPRTIDEIVGQQHLLTPGSPLRRLAEGTGAMSVFLWGPPGV 76 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 GKTT+A V++ N ISAVT+GVK+IR ++ AR+ G+ T+LFVDEVHRF+K+ Sbjct: 77 GKTTIASVVSHATNRRFVEISAVTAGVKDIRRELDTARRQLALGQPTVLFVDEVHRFSKA 136 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQD LP +E+ T+T I ATTENPSF + S LLSR+ + LK L+ D+ +L +A+ D Sbjct: 137 QQDVLLPAVENRTVTLIAATTENPSFSVISPLLSRSLLLTLKPLTEADVSSLLDRALSDP 196 Query: 182 --TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 R + VL D+ R + +L GDARRAL LE A A + + ++++ Sbjct: 197 RGLRTESDRRYVLEDDARADLLQLAAGDARRALTYLEEAAAGASAAGT--DTITSQIVST 254 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + R+D GD+ YD+ISA KSVRGS DAAL++ AR+I AG DP ++ARR + +A Sbjct: 255 AVDRAAVRYDRDGDQHYDVISAFIKSVRGSDVDAALHYLARMIEAGEDPRFIARRLIILA 314 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SED+G A P +Q +AA +G E +AQA + A APKSNAV TA ALAD Sbjct: 315 SEDIGMAAPSVLQTCVAAAQAVQLIGMPEARLNLAQATIAAATAPKSNAVITAIDGALAD 374 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 R +VP HLR+A ++G+G YRYAH+ + A + Y P +IA TRYY PT Sbjct: 375 VRAGKGGEVPAHLRDAHYSSAHDLGHGVGYRYAHNFPHGVAKQQ-YLPDDIASTRYYDPT 433 Query: 420 NRGLEGKIGEKLAWLAEQ 437 + G E I ++L+ + Sbjct: 434 DHGNEAAIAQRLSQIRAL 451 >UniRef50_Q9WYX8 UPF0189 protein TM_0508 n=15 Tax=cellular organisms RepID=Y508_THEMA Length = 599 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 157/430 (36%), Positives = 237/430 (55%), Gaps = 21/430 (4%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 + +PL+ +RP++ ++GQ H+ L R ++ G++ S IL+GPPG+GKT++ ++ Sbjct: 4 SEKPLSELLRPKDFEDFVGQDHIFGNKGILRRTLKTGNMFSSILYGPPGSGKTSVFSLLK 63 Query: 72 RYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 RY N +V +S+ GV EI+ ++R Q R G++ +LF+DE+HR NK+QQ + H+E Sbjct: 64 RYFNGEVVYLSSTVHGVSEIKNVLKRGEQLRKYGKKLLLFLDEIHRLNKNQQMVLVSHVE 123 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 G I + TTENPSF + ALLSR R+ K LS ED+ ++L +A E +I Sbjct: 124 RGDIVLVATTTENPSFVIVPALLSRCRILYFKKLSDEDLMKILKKATE-------VLNID 176 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 L + +AI GDAR+ LNTLE++ + + + E L + G S Sbjct: 177 LEESVEKAIVRHSEGDARKLLNTLEIVHQAFK-----NKRVTLEDLETLLGNVSGY---T 228 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 + YD SA KS+RGS P+AA+Y+ ++I G DP ++ARR + ASEDVG ADP A+ Sbjct: 229 KESHYDFASAFIKSMRGSDPNAAVYYLVKMIEMGEDPRFIARRMIIFASEDVGLADPNAL 288 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A++ VG E + + VYL+ APKSN+VY A K +E P DVP+ Sbjct: 289 HIAVSTSIAVEHVGLPECLMNLVECAVYLSLAPKSNSVYLAMKK----VQELPVEDVPLF 344 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 LRN T+ MK+ GYG+ Y Y HD Y P ++ + P G E ++ E+L Sbjct: 345 LRNPVTEEMKKRGYGEGYLYPHDFGG--FVKTNYLPEKLKNEVIFQPKRVGFEEELFERL 402 Query: 432 AWLAEQDQNS 441 L + Sbjct: 403 RKLWPEKYGG 412 >UniRef50_C6BV47 AAA ATPase central domain protein n=12 Tax=Desulfovibrionales RepID=C6BV47_DESAD Length = 420 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 167/429 (38%), Positives = 239/429 (55%), Gaps = 28/429 (6%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 + L+ +DN QPLA R+RP+ + ++ GQ H+ + R + L S++L+GPPG GK Sbjct: 1 MKLELTDN--QPLADRIRPKKIDEFFGQNHIRERVEAFER---SKRLPSLLLFGPPGCGK 55 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ 123 +TLA ++A+ RISA SG+ +R+ + IL +DE+HRF+K+QQ Sbjct: 56 STLAMLLAKSTGRHFMRISAPESGITALRKQL---------AGMDILILDELHRFSKAQQ 106 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLP +E G IT + TTENPSF + LLSR V L+SL D+ + +A E+ Sbjct: 107 DFFLPILESGEITLLATTTENPSFSVTRQLLSRLHVLRLRSLGKTDLLAICNRACEE--- 163 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 +I L +++ I + GD R LN LE + + + E L +I E Sbjct: 164 ----LEIELSEDSLNLITSMAGGDGRSLLNLLEYTSQL------PAEKREAENLRKILPE 213 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 R D GD Y+L SAL KS+RGS PDAALY+ +I +G DP ++ RR + A ED+ Sbjct: 214 TVIRGDRDGDSHYELASALIKSIRGSDPDAALYYLGCLIESGEDPKFITRRLIISAGEDI 273 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G ADP AM +A++ +G EG +++A+VYLA APKSN+ Y A+ + R+ Sbjct: 274 GLADPYAMTMAVSCQQAVEFIGMPEGFIPLSEAVVYLALAPKSNSTYAAYHTVKQEIRQN 333 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 VP+HLRNA T L KE GYG+ Y Y H N+Y E Y PPEIA +Y P ++G Sbjct: 334 GMLPVPLHLRNATTSLQKEWGYGRNYLYPHSYPNSYVEQE-YLPPEIADRMFYDPKDQGE 392 Query: 424 EGKIGEKLA 432 E ++ L Sbjct: 393 EPRLNAWLK 401 >UniRef50_A1SJC4 Recombination protein MgsA n=2 Tax=Actinobacteria (class) RepID=A1SJC4_NOCSJ Length = 456 Score = 466 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 188/438 (42%), Positives = 258/438 (58%), Gaps = 6/438 (1%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 SL + + PLA RMRP L + +GQ L AAG PL R +E S++LWGPPGTGKT Sbjct: 19 SLSANTHASAPLAVRMRPRTLDELVGQAQLRAAGSPLRRLVEGDQSMSLLLWGPPGTGKT 78 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQ 123 T+A ++++ + +SAV++GVKE+R AI+ AR + GR T+LFVDEVHRF+K+QQ Sbjct: 79 TIAAIVSQQTDRRFVEVSAVSAGVKEVRAAIDAARAELAGGGRETVLFVDEVHRFSKAQQ 138 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 DA LP +E+ +T I ATTENP F + S LLSR+ + L+SL +D+ VL +A+ D+ Sbjct: 139 DALLPGVENRWVTLIAATTENPFFSVISPLLSRSLLLRLESLDDDDVRAVLDRAITDERG 198 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 G + + D+ + L GDARR+L LE A G + Sbjct: 199 LAGS--VGVDDDALGHLVRLAGGDARRSLTYLE--AAAGAALAQGLETVDLATAETAVDR 254 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 + R+D +GD+ YD++SA KSVRGS DAAL++ AR+I AG DP ++ARR + +ASEDV Sbjct: 255 AAVRYDRQGDQHYDVVSAFIKSVRGSDADAALHYLARMIEAGEDPRFIARRLMILASEDV 314 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G ADP A+ A+AA +G E + +A A + LA APKSNAV TA AALAD R Sbjct: 315 GLADPTALPTAVAAAQTVQLIGMPEAQLTLAHATIALAVAPKSNAVTTAIGAALADVRAG 374 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 VP HLR+A K++G+G Y+Y+HDE A + Y P +A YY PT G Sbjct: 375 KIGQVPPHLRDAHYSGAKKLGHGARYKYSHDEPFGIAEQQ-YAPDVVADAEYYRPTTLGA 433 Query: 424 EGKIGEKLAWLAEQDQNS 441 E I E+ + + Sbjct: 434 EAAIKERWERVRRLIRGQ 451 >UniRef50_A9U314 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U314_PHYPA Length = 498 Score = 466 bits (1199), Expect = e-130, Method: Composition-based stats. Identities = 172/430 (40%), Positives = 247/430 (57%), Gaps = 30/430 (6%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 +L S + +PLA RMRP ++ +GQ HLL L I+A L S+I WGPPGTGKT Sbjct: 69 ALVGSGKSLEPLAERMRPASVDLVVGQDHLLGPRCMLRNLIDANSLSSIIFWGPPGTGKT 128 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQD 124 +L + IAR + +SAV+SG+KE+RE +E A++ + G RT+L +DE+HRFNK+Q D Sbjct: 129 SLVQTIARAVSYRFVALSAVSSGLKEVRETLEEAKRLQKFGERTLLLLDEIHRFNKAQLD 188 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 FLP +E G I IGATTENPSFE+N+ALLSR +V L L + I +L +A+ DK +G Sbjct: 189 VFLPCVEAGHIVLIGATTENPSFEINAALLSRCKVLTLNKLQPDHIRSLLDRAISDKEKG 248 Query: 185 Y--------GGQDIVLPDETRRAIAELVNGDARRALNTLEM--MADMAEVDDSGKRVLKP 234 I + + +A+ +GDAR ALNTLE+ +A A + + +R Sbjct: 249 LMVSLAGSAAEDVIKVEQDALEFLADAADGDARVALNTLELAGLAAFASWESTPRRPCSA 308 Query: 235 ELLTEIA--------GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 + + I FD G+ Y+++SAL KS+RG PDAA+YW AR++ G Sbjct: 309 DKASTILADANAKAIQRSYFLFDKSGEEHYNIVSALIKSMRGGDPDAAIYWLARMLEGGE 368 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 PLY+ARR + ASEDVG +DP+A+ +A+A + +G E +AQ + YL APKS Sbjct: 369 GPLYIARRLIRFASEDVGLSDPQALVLAVACYQACHFIGMPECNVNLAQCVTYLTLAPKS 428 Query: 347 NAVYTAFKAALADAR-ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY 405 VY A +AA + + + VP+HLRNAPT+LMK+ H + + Sbjct: 429 VVVYHAVEAAQRLVKGAKKNEPVPMHLRNAPTQLMKD----------HSYDRQAEPAD-F 477 Query: 406 FPPEIAQTRY 415 PP + ++ Sbjct: 478 LPPSLRGQKF 487 >UniRef50_C5MFE6 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MFE6_CANTT Length = 698 Score = 466 bits (1199), Expect = e-130, Method: Composition-based stats. Identities = 171/437 (39%), Positives = 249/437 (56%), Gaps = 25/437 (5%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L + GQ+ LL L I++ + S +LWG PG GKT+LA +IA+ + Sbjct: 161 PLAHRLRPKTLDDFFGQEKLLGKDGALRNMIQSDIIPSFLLWGVPGIGKTSLARIIAKNS 220 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +S + S K ++E +A ++ G+RTILF+DE+HRFNK+ QD LP IE G Sbjct: 221 RCKFVELSGIDSNAKNLKEVFLQAENHKKLTGQRTILFLDEIHRFNKAVQDLLLPVIEKG 280 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG----YGGQD 189 +T IGATTENPSF LN+ALLSR ++++ L+TE + ++LT+A+ + R YG Sbjct: 281 IVTVIGATTENPSFNLNNALLSRVHTFVMEPLNTESLIKILTRALFEVNRIRKKLYGFHY 340 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD-----------SGKRVLKPELLT 238 I L + IA L GD+R ALN LE + D G + +LL Sbjct: 341 ISLQKDAYHYIANLSMGDSRVALNILETLNAYLSADKFKIDNNDTSPKQGVIKVSADLLK 400 Query: 239 EIAGERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCL 296 + R+ +D GD YD+ISA HKS+RGS P+AA+++ ++++ G DP+++ RR + Sbjct: 401 PLLKTRNFHQMYDRNGDSHYDIISAFHKSIRGSDPNAAMFYLVKMLSGGEDPMFIMRRMI 460 Query: 297 AIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA 356 I+SED+G D + IAA + VG EGE +A LA APKS Y A ++A Sbjct: 461 VISSEDIGLRDSSCLPFMIAAKEALEFVGMPEGEIILAHCTNKLALAPKSTKSYRALRSA 520 Query: 357 LADARERPD---YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQT 413 +E P+ VP+HLRNAPTKLMKE+GYG EY+Y + N + YFP + Sbjct: 521 QNILKENPELTKLPVPIHLRNAPTKLMKELGYGDEYKYNPNYENGKIK-QNYFPQGMEPI 579 Query: 414 RYYFPTNRGLEGKIGEK 430 ++ + G K+ +K Sbjct: 580 KFLDDIHLG---KLKDK 593 >UniRef50_UPI0000D57862 PREDICTED: similar to werner helicase interacting protein n=1 Tax=Tribolium castaneum RepID=UPI0000D57862 Length = 494 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 164/418 (39%), Positives = 248/418 (59%), Gaps = 31/418 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI---- 70 PLA +++P+ L ++GQ H+L L +E G + +M+LWGPPG GKT+L+ VI Sbjct: 93 PLAKQLQPKCLDDFMGQSHVLGENTVLRTLLEKGDIPNMVLWGPPGCGKTSLSGVIQGIC 152 Query: 71 -ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 + + A T+GVK+++ + A+ + G RT+LF+DE+HRFNK QQD FL H Sbjct: 153 KSNPTKLKFVSLCAATAGVKDVQNIVSAAKLQQKFGCRTVLFMDEIHRFNKKQQDIFLLH 212 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA-----MEDKTRG 184 +E G I +GATTENPSF +NSALLSR RV +L+ L + + Q+L + +E +G Sbjct: 213 VEKGDIILVGATTENPSFTVNSALLSRCRVIVLQKLDPDCLYQILERGARNFNVEVVDKG 272 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 + + + + +A++ +GDAR AL L+++ ++ +V+ E + E + Sbjct: 273 ARSKGFAVQADALKWLADISDGDARIALGNLQLVLQY---NEDKNKVVTIEDIKEKIKKS 329 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVG 304 +D KG+ Y++ISA+HKS+RGS P+AALYW R+I +G DPLY+ARR + ASED+G Sbjct: 330 HLLYDRKGEEHYNVISAMHKSIRGSDPNAALYWTTRMIVSGEDPLYIARRMVRAASEDIG 389 Query: 305 NADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR--E 362 NADPRA+Q+A++ +G E + +AQ +YLA APKS +A A + E Sbjct: 390 NADPRALQLAVSTMQGCQLLGMPECDVLLAQCAIYLARAPKSREADSALARAKQLIKSCE 449 Query: 363 RPDYDVPVHLRNAPTKLMKEMGYGQ---EYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 VP+HLRNAPT+LMK++GYG+ + RY Y PPE+ ++ Sbjct: 450 GLQPSVPMHLRNAPTRLMKDLGYGKLEGDERY-------------YMPPELKNVDFFK 494 >UniRef50_C4Y1S6 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y1S6_CLAL4 Length = 768 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 174/466 (37%), Positives = 254/466 (54%), Gaps = 34/466 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L + GQ+ L+ L + + + S ILWG PG GKT+LA +IA + Sbjct: 223 PLAQRLRPKTLDDFFGQEKLVGPNGILRNIMASQQIPSFILWGVPGVGKTSLARIIASNS 282 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N +S S K+++EA A+ + +G +TILF+DE+HRFNK+ QD LP IE G Sbjct: 283 NHRYVELSGSESSAKKLKEAFSNAQNEQQLSGTKTILFLDEIHRFNKAVQDLLLPVIEKG 342 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKTRGYGGQD 189 +T IGATTENPSF LN+ALLSR ++++ LS E + ++L + + + + +G Sbjct: 343 VVTVIGATTENPSFTLNNALLSRMHTFVMEPLSHEALVKILNKGLLLVNKTRKIVHGLHL 402 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEV------------------DDSGKRV 231 I + E IA L GD+R ALN LE + + G Sbjct: 403 IAMNKEAIDHIARLSTGDSRVALNILESVNAYLSGRKYNAFPDREEGETIDVPEKIGIIK 462 Query: 232 LKPELLTEIAGERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPL 289 + E L + R+ +D G+ YD ISA HKSVRGS DAA+++ ++++ G DPL Sbjct: 463 VDLENLKPLLATRNFHQMYDKVGENHYDTISAFHKSVRGSDADAAVFYLVKMLSGGEDPL 522 Query: 290 YVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV 349 ++ARR + IASED+G D + AI+A + VG EGE +A V LA APKS Sbjct: 523 FIARRMIVIASEDIGLRDSSCLPFAISAMEAVQFVGMPEGEIILAHCAVKLARAPKSTKS 582 Query: 350 YTAFKAALADARERPD---YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYF 406 Y A + A +E+P+ +P+H+RNAPTKLMKE+GYG+ Y+Y + A + + Sbjct: 583 YRALRTAQELLKEKPEVTKLPIPLHIRNAPTKLMKELGYGESYKYNPFFKHGIAK-QTFM 641 Query: 407 PPEIAQTRYYFPTNRGL---EGKIGEKLAW--LAEQDQNSPIKRYR 447 PPEI ++ T+ G E + EK EQ+ ++YR Sbjct: 642 PPEIQDVKFVEDTHLGTIVDEDEEKEKYDKADAEEQEYRKFKEQYR 687 >UniRef50_C7LWR1 AAA ATPase central domain protein n=3 Tax=Desulfovibrionales RepID=C7LWR1_DESBD Length = 430 Score = 463 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 165/434 (38%), Positives = 243/434 (55%), Gaps = 26/434 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +RPE+L +IGQ H + L +++ L S++L+GPPG GK+T+A ++A++ Sbjct: 19 RPLAESLRPESLDDFIGQSHFRQRLRTL---MQSKDLPSLLLFGPPGCGKSTVALLLAKH 75 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A+ R+SA G+ +R+ I+ + IL +DE+HR++K+QQD FLP +E G Sbjct: 76 ADKPFVRVSAPEVGITALRKQIQD---------KEILILDELHRYSKAQQDFFLPLLETG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T I TTENPSF + LLSR V L+SL ++ V + ME D ++P Sbjct: 127 ELTLIATTTENPSFSVTRQLLSRLHVLRLRSLGMAELVDVGKRGMEK-------LDSLIP 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +++ +A L GDAR LN +E A + E D L+P+ L E R D +GD Sbjct: 180 EKSLELLATLSGGDARTMLNLVEFAAGLEEKD------LEPDQLKTRLPEIVLRGDREGD 233 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y+L SAL KS+RGS PDAALY+ A ++ G DP ++ RR + A+EDVG DP A+ + Sbjct: 234 SHYELASALIKSIRGSDPDAALYYLASLVETGEDPRFICRRLILSAAEDVGLGDPMALPL 293 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A++ R+G EG +A+ VYLA APKSN+ Y + +A+ + R VP+HLR Sbjct: 294 AVSCEQAVERIGMPEGWIPMAETTVYLALAPKSNSAYAGYLSAIKEIRTNGPKPVPLHLR 353 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 NA T L KE GYGQ Y+Y H A+ + Y PPE+ +Y +G E ++ Sbjct: 354 NASTSLQKEWGYGQGYKYPHAYPEAWVEQD-YLPPELKGRVFYQAKTQGHEERLALWTRK 412 Query: 434 LAEQDQNSPIKRYR 447 L Q K + Sbjct: 413 LKASRQRPKGKETK 426 >UniRef50_C9M5W8 Replication-associated recombination protein A n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5W8_9BACT Length = 426 Score = 462 bits (1190), Expect = e-129, Method: Composition-based stats. Identities = 175/431 (40%), Positives = 245/431 (56%), Gaps = 17/431 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L +Y G +LA G PL R +E G + S IL+GPPG GKT L ++ R Sbjct: 7 PLAERMRPRSLDEYRGHSSILAPGAPLRRFLEEGDVPSCILYGPPGVGKTALVRLMGRVT 66 Query: 75 NADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 ++ I+AV++ V E+R+ ++RA R +GR I FVDE++ FN+SQQDA LP +E G Sbjct: 67 GRELLEINAVSAKVSELRDLVDRAADLRRLSGRSAIAFVDELYHFNRSQQDALLPSVERG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + +G TTENP FE+N LLSR V+ + L ED+ ++L A+ D+ RG G ++ Sbjct: 127 EVILVGTTTENPRFEINKTLLSRLLVFEIGPLEKEDLVEILKSALTDRERGLGELELSAS 186 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ AIA GD R+AL LE ++ V SG+R ++ + LT+ R D + D Sbjct: 187 DDVIEAIAASAGGDGRQALTRLEFLSRAIAV--SGRRTIEEDDLTKSLPAAFVRHDRRQD 244 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y +ISA+ KS+RGS PDAA+YW AR+I G D ++ARR + +A+EDVG ADP+A+ V Sbjct: 245 DHYAVISAMIKSIRGSDPDAAVYWLARLIEGGEDVRFIARRLMILAAEDVGLADPQALVV 304 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A A D RVG E +++ +YLA APKSN+ Y A A R VP HL Sbjct: 305 ATAGADAADRVGWPEARIILSEVALYLAAAPKSNSAYLAVGKAQDAIRRGDLLAVPSHLI 364 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 N Y+Y HD N + A + Y P R+Y P + G+E +I +LA Sbjct: 365 NGQP----------GYQYPHDFPNHWTA-QAYLP---KPRRFYEPGSMGVESRIAARLAM 410 Query: 434 LAEQDQNSPIK 444 + Q K Sbjct: 411 FWRRFQEKDEK 421 >UniRef50_A6DHI5 ATPase, AAA family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHI5_9BACT Length = 430 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 177/435 (40%), Positives = 250/435 (57%), Gaps = 21/435 (4%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 F +PLAA +RPE + GQ HL A G L R+IE S+I GPPGTGKT+LA Sbjct: 4 FDHPRVEPLAATLRPEGFGDFFGQGHLTAEGSLLRRSIENDCFSSIIFTGPPGTGKTSLA 63 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAF 126 +I+++ AD +SA+ S V E+R+A++ A + R +GR+T+LFVDE+HRFNK+QQD+ Sbjct: 64 SIISKHTEADFIALSAIDSSVSEVRKAVKAADEARKFSGRKTVLFVDEIHRFNKAQQDSL 123 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 L IE+GT+ FIGATT NP F L AL SR+ ++ LK L ++ +L M + Sbjct: 124 LKDIENGTVRFIGATTHNPGFYLTPALCSRSLIFTLKPLEASAVKSLLEAKMTKIMKALE 183 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSA 246 + + +E + ++E GDARRAL +E+ A+ D G E L E +S Sbjct: 184 AE-LQFDEEGLKFLSENCEGDARRALTVIELAVKTAQSDKIG-----LEELRECLQVKSY 237 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 ++D D Y+ SA KS+RGS PDAA+YW A ++ AG D ++ARR + ASEDVGNA Sbjct: 238 KYD--ADAHYNAASAFIKSMRGSDPDAAVYWLAYMLEAGEDIRFIARRIMIFASEDVGNA 295 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 DPRA+Q+A++A VG E ++QA+ Y A APKSNA Y A AL D + + Sbjct: 296 DPRALQLAVSASQAVDIVGMPEARIILSQAVTYCATAPKSNAAYKAVNLALEDVKNQRSQ 355 Query: 367 DVPVHLRNAPTKLMKEMGYG---QEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 +P+HLR+ + GY +Y Y H+ AY E Y +++YY P RG Sbjct: 356 VIPMHLRDP-----RSSGYNPEEGDYVYPHNSKEAYVKQE-YI---GVESKYYQPVERGY 406 Query: 424 EGKIGEKLAWLAEQD 438 E KI E++ + Sbjct: 407 ETKIKERMDYWQSLR 421 >UniRef50_Q8RGJ6 ATPase associated with chromosome architecture/replication n=9 Tax=Fusobacterium RepID=Q8RGJ6_FUSNN Length = 407 Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 164/425 (38%), Positives = 250/425 (58%), Gaps = 30/425 (7%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA ++RP++L ++GQ+ LL + R I L + I +GPPG GK++L E+I+ Sbjct: 12 EPLAYKLRPKSLDDFVGQEKLLGKDGVITRLILNSTLSNSIFYGPPGCGKSSLGEIISNT 71 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQDAFLPHIED 132 + + E+++A T+ V +IR +E AR+N +RTILF+DE+HRFNK+QQDA L + ED Sbjct: 72 LDCNFEKLNATTASVSDIRNVVETARRNIELYNKRTILFLDEIHRFNKNQQDALLSYTED 131 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GT+T IGATTENP + +N+ALLSR V+ K+L+ EDI +++ +G +I + Sbjct: 132 GTLTLIGATTENPYYNINNALLSRVMVFEFKALTNEDILKLI-------DKGLNFLNICM 184 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ + I ++ GD+R ALN +EM ++ + + + I ER FD K Sbjct: 185 GDKIKEIIVDISQGDSRIALNYVEMYNNIHSQ-------MSEDEIFSIFKERQVSFDKKQ 237 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D+ YD+ISA KS+RGS PDAA+YW AR++ G DP Y+ARR ASED+G A+P A+ Sbjct: 238 DK-YDMISAFIKSIRGSDPDAAVYWLARLLDGGEDPKYMARRLFIEASEDIGMANPEALL 296 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 VA AA + ++G E +A +YLA + KSN+VY A ALAD ++ +VP+++ Sbjct: 297 VANAAMNACEKIGMPEVRIILAHTTIYLAISSKSNSVYEAIDGALADIKKGELQEVPMNI 356 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 + Y+Y H+ + + + Y + +YY P N E I EKLA Sbjct: 357 CH----------DNVGYKYPHNYTDNFIK-QKYMN---KKRKYYKPGNNKNEKLIAEKLA 402 Query: 433 WLAEQ 437 L ++ Sbjct: 403 KLWDE 407 >UniRef50_B6K1T7 DNA-dependent ATPase MGS1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K1T7_SCHJY Length = 514 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 166/440 (37%), Positives = 241/440 (54%), Gaps = 25/440 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R+RP+ L Y+GQ+ L+ G + IE SMILWG G GKTTLA +IA+ Sbjct: 87 RPLAERVRPKTLDDYVGQESLVGKGGIIRNLIERDECPSMILWGNSGVGKTTLARIIAKT 146 Query: 74 ANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 A +SA ++ V + R+ E ++ R G++TI+F+DEVHRFN++QQD FLP +E Sbjct: 147 TGAHFLEVSATSASVSDCRKIFEESQNLLRLTGKKTIVFLDEVHRFNRAQQDIFLPMVEK 206 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT NPSF LNSALLSR V+ L +++ +L +AM+ ++ + + L Sbjct: 207 GLITL------NPSFRLNSALLSRCSVFTFNVLDKDNVLSILRRAMQIESER-KERKLEL 259 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 + + I+ + +GDAR ALN LE+ M E + L + + +D+ G Sbjct: 260 DESILQHISAICDGDARVALNCLEIALGMLEGGS-----VSLPDLKKKFARSFSVYDSTG 314 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD ISA HKS+RGS DAALY+ R++ +G DPLYVARR + IASEDVG D + Sbjct: 315 DAHYDTISAFHKSIRGSDVDAALYYLCRMLESGEDPLYVARRMVRIASEDVGLGDNSLLP 374 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD---YDVP 369 +A AA+ ++G E + +A LA APK+ VY A+K + P+ +P Sbjct: 375 LASAAFTATQQIGMPEADVVLAHCAAALALAPKNVDVYRAYKRVKSFVASDPEAGRAQIP 434 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF--------PTNR 421 +HLRNAPTKLMKE+GY + Y+Y D + + Y P + R++ P Sbjct: 435 MHLRNAPTKLMKELGYNKGYKYNPDYKDGRVKQD-YLPKPMKDKRFFRIPMDLPVDPDLD 493 Query: 422 GLEGKIGEKLAWLAEQDQNS 441 E + E + +N Sbjct: 494 ADESSVTELQEERRTEKRND 513 >UniRef50_B1HUL5 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=B1HUL5_LYSSC Length = 420 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 148/427 (34%), Positives = 229/427 (53%), Gaps = 13/427 (3%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 MRP L + +G Q + L + I+ H+ SM+L+G PG GKT++A IA + Sbjct: 1 MRPLTLDEIVGHQDFIGPNTALYKMIQNEHVPSMLLYGEPGIGKTSIANAIAGSSQLPFF 60 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 ++A +G K++ + ++ AR + + +LF+DE+HRFNK QQD LPH+E+G+I IG Sbjct: 61 ALNATRAGKKDVEDIVQEARISG----KVLLFLDEIHRFNKLQQDTLLPHVENGSIVLIG 116 Query: 140 ATTENPSFELNSALLSRA-RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRR 198 ATTENP ++N A+ SR +Y LK L+ E++ +++ +A+ D+ RG G +L D Sbjct: 117 ATTENPYHDVNPAIRSRCGEIYQLKRLTKENLMELVEKALADEKRGLGKYHFILTDSQIE 176 Query: 199 AIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDL 258 IAE NGDAR+AL LE + A + G + ++ + D KG FY+L Sbjct: 177 RIAEAANGDARKALTLLESIY-YASDEVEGPTIAADHIIDHLISRIGVYGDKKGSHFYNL 235 Query: 259 ISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAW 318 +SAL KSVRGS +AALY+ A ++ G D + V+RR L +A ED+G A+P +AA Sbjct: 236 LSALQKSVRGSDTNAALYYLAHLLETG-DLVAVSRRLLVMAYEDIGLANPEVGPHMLAAV 294 Query: 319 DCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTK 378 R+G E +A A++ + A KSN+ A A+ + +P HLR+A Sbjct: 295 QAAERLGLPEARIPLASAVIEMCLASKSNSAILAIDEAIKAIHDGKTGGIPHHLRDAHYA 354 Query: 379 LMKEMGYGQEYRYAHDEA----NAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 K++G+ Y+Y H+ + + Y P E+ T +Y P G E ++ L Sbjct: 355 GAKDLGH-VGYQYPHNTPIGTFGGWVDQQ-YLPDELVGTEFYKPVVAGEEKRMASIYEKL 412 Query: 435 AEQDQNS 441 QN Sbjct: 413 KSFHQNK 419 >UniRef50_Q4P896 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4P896_USTMA Length = 566 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 170/428 (39%), Positives = 240/428 (56%), Gaps = 29/428 (6%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +P A RMRP+ L +Y+GQ ++ PL + G + SMILWGPPGTGKTTLA ++A+ Sbjct: 26 KPFAERMRPQTLDEYVGQSDVV--NGPLKMLLRQGKIPSMILWGPPGTGKTTLARLLAKS 83 Query: 74 ANA------------DVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNK 120 A++ ISA SG ++++ ++ A +RT+LF+DE+ RFN+ Sbjct: 84 ASSTDSTCRQGPPPHRFVEISATNSGANDVKKILDEALHRLELTAQRTLLFIDEIQRFNR 143 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +QQD LP +E G I + ATTENPSF L SAL+SR RV++L LS ++ QVL A+ Sbjct: 144 AQQDVLLPAVEKGQIVLVAATTENPSFRLQSALISRMRVFVLTKLSVDECCQVLRNALAS 203 Query: 181 KTRGYGGQD--------IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVL 232 R D + + R IA + +GDAR AL LE+ + + Sbjct: 204 VKRESDQADQHAECVAAAYIDEHLIRWIANMADGDARTALGALELALSTTDASVCSAENV 263 Query: 233 KPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVA 292 L + ++D GD YD ISALHKS+RGS DAALYW AR++ +G D L++A Sbjct: 264 S--RLKTALKRTALQYDRTGDMHYDTISALHKSIRGSDADAALYWLARMVCSGDDALFIA 321 Query: 293 RRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTA 352 RR + ASED+ A+Q+A A + VG E +AQ +V+LA +PKS Y A Sbjct: 322 RRLIVAASEDIDTL--AALQMATATYQACQVVGLPECGNNLAQCVVFLAESPKSTRSYRA 379 Query: 353 FKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 + A A ++ VP+H+RNAPTKLM E+GYG+EYRY A+ + +FPP++ Sbjct: 380 WNKAKALVEGGYNHPVPLHIRNAPTKLMNEIGYGKEYRYEPRFAHP--VYQEFFPPQLKG 437 Query: 413 TRYYFPTN 420 TR PT Sbjct: 438 TRLLSPTP 445 >UniRef50_Q04QW6 Holliday junction resolvase helicase subunit-like ATPase n=4 Tax=Leptospira RepID=Q04QW6_LEPBJ Length = 423 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 164/447 (36%), Positives = 237/447 (53%), Gaps = 29/447 (6%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L F+ PLA ++RP + IGQ A K L S+IL+GPPG Sbjct: 1 MSDL---FTKKPIPPLAHKIRPSGFEEVIGQ---TRATKQLVNY---RSPVSIILYGPPG 51 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGK+TLA ++ R N +AV++GV EI++ +ERA + +LF+DE+HRF+ Sbjct: 52 TGKSTLAGILCRKWNLPFVEYNAVSTGVSEIKKLLERAEREGTI----LLFLDEIHRFSA 107 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQD+ L +E G + IGATTENP+F + LLSR ++ ++ LS E+ +L + +++ Sbjct: 108 SQQDSLLKGVETGHLVLIGATTENPAFRITRPLLSRCQILKIEPLSWEEQSLLLERGIQN 167 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 I L + + GD R+ L+ LE ++ + + E Sbjct: 168 LEYS-----IHLNPGAKETLIRFSGGDGRKLLSNLEGLS----FSFPENHTISKSDVEEY 218 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 R +D G+ YD+ISA KSVRGS PDAALY+ A ++ G DPL++ RR + +AS Sbjct: 219 LESRVIEYDKSGESHYDVISAFIKSVRGSDPDAALYYLAVLLEGGEDPLFIMRRLIILAS 278 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNA + +A++ +G EG +A +LA PKSNA Y AAL+ Sbjct: 279 EDVGNASVNGLPLAVSGLHALEAIGMPEGRLVLAHVTTFLASCPKSNASYKGIGAALSFV 338 Query: 361 RERPDY-DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQT--RYYF 417 RE+ +P LRNAPT L K+ G Q Y Y HD + YFP E A+ R+YF Sbjct: 339 REKGTGIKIPNRLRNAPTFLHKKEGASQGYLYPHDFGG--FKEQNYFPDEFAENPPRFYF 396 Query: 418 PTNRGLEGKIGEKLAWLAEQ--DQNSP 442 PT G E K+ E L + E+ ++ P Sbjct: 397 PTGNGAELKLKEYLDRVWEKFSSRDDP 423 >UniRef50_A0Q7R7 AAA family-ATPase n=19 Tax=Francisella RepID=A0Q7R7_FRATN Length = 412 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 168/427 (39%), Positives = 244/427 (57%), Gaps = 18/427 (4%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + PLAAR+RP+++ + +GQ+HLL+ L + + + S++L G PG GKT+LA +IA Sbjct: 3 YIPLAARIRPQSIDEIVGQEHLLSQHGILTKILAGDGICSLVLCGKPGVGKTSLARIIAS 62 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +SAV SGVK+I++ I + + +LF+DE+HRFNKSQQD LP++E Sbjct: 63 SKKLEFFELSAVDSGVKDIKKLITDNQHLDSF----VLFLDEIHRFNKSQQDILLPYVES 118 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G I IGATTENP++ LN AL+SR + LK LS ++++ + + + Sbjct: 119 GKIILIGATTENPTYYLNDALVSRLFILRLKRLSLVATQKLIEKTLSQ-DEVLAKHKFKI 177 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D ++ GD R+ LN LE M ++ D L EL + GE S F +G Sbjct: 178 DDGLYNSMHNYSEGDCRKILNLLERMFLISTRGDE--IYLNKELFDQAVGETSRDFHREG 235 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 FY+ +SA HKSVRG+ PDAA++W + ++ G DPL +ARR L IASED+GNADP+A++ Sbjct: 236 KEFYEQLSAFHKSVRGTDPDAAIFWLSVMLDNGVDPLVIARRMLCIASEDIGNADPQALR 295 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 VA+ AW+ + ++G EG +AQA +YLA APKSNA Y A A + + DVP HL Sbjct: 296 VAMDAWNAYEKLGMPEGRLVLAQAAIYLAVAPKSNACYKALAQAQQLVKSLGNIDVPQHL 355 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +N K Y Y H+ N+Y + Y P I +Y PT G E KI KL Sbjct: 356 KN--YKDS-------NYLYPHNYPNSYVIQQ-YLPDNII-QNFYQPTASGFEAKIKTKLD 404 Query: 433 WLAEQDQ 439 + + + Sbjct: 405 SINKIKK 411 >UniRef50_C7NB61 AAA ATPase central domain protein n=12 Tax=Fusobacteriaceae RepID=C7NB61_LEPBD Length = 409 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 153/427 (35%), Positives = 242/427 (56%), Gaps = 30/427 (7%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R RP++L + GQ+ L+ L + IE G+ + I WG PGTGKTTLAE+I+ Sbjct: 12 KPLAFRYRPKSLDDFYGQKRLVGENGILRKIIERGNFMNAIFWGAPGTGKTTLAEIISNK 71 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIED 132 N E ++A+ + V +I+E E+A + G++T+LF+DE+HRFNK QQD+ L +E+ Sbjct: 72 MNYHYEYLNAIKASVADIKEISEKAANRFHMNGQQTLLFLDEIHRFNKLQQDSLLQDLEN 131 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G I IGATTENP + LN+ALLSR + K LS +++ ++L E + G + Sbjct: 132 GNIILIGATTENPYYNLNNALLSRCLAFEFKKLSEKNLMEILKNINEKENFG-------I 184 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ I+E++ GDAR+A+N LE++ ++ E + EI + + K Sbjct: 185 SDDILEYISEIIEGDARQAINILELITNVG-------VEFTLEEVKEILNTKKSYH--KT 235 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + Y+ ISA+ KS+RGS PDA +YW A++++ G D LY+ARR + +ASED+G A+P+A+ Sbjct: 236 EDKYNTISAMIKSIRGSDPDATVYWMAKMLSGGEDILYIARRLVILASEDIGLANPQALP 295 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A+A + +G E +++ +YLA +PKSN+ Y A +AL +VPVHL Sbjct: 296 IAVAGLNAIKEIGMPEARIILSEVAIYLAISPKSNSAYNAINSALKHIENEKIQEVPVHL 355 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 ++G + Y+Y HD N Y +VY ++ +Y E E L Sbjct: 356 --------TKVGV-KAYKYPHDYENHYVE-QVYMNEKMK---FYEHGENKFEKAADEWLK 402 Query: 433 WLAEQDQ 439 + + + Sbjct: 403 KIKKNQK 409 >UniRef50_A5V6U8 Recombination protein MgsA n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6U8_SPHWW Length = 444 Score = 450 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 181/438 (41%), Positives = 247/438 (56%), Gaps = 11/438 (2%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 + S D +PLA R+RP + +GQ+HL PL R + A L S+I WGPPG Sbjct: 9 PDASSVPCDVETRPLAERLRPTRIEDVVGQEHLTGPDAPLARMVAARRLSSIIFWGPPGI 68 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 GKTTLA ++A E SA V ++ A A+++ G+RT+LF+DE HR ++ Sbjct: 69 GKTTLARLLADLVGMRFEAFSATDVTVAGLKAAYAEAKRHLRMGKRTVLFLDESHRAARN 128 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 + LP +EDGTIT I ATTE PSF L + SRARV L L T + Q + D+ Sbjct: 129 ITETLLPVMEDGTITAILATTEAPSFTLPKGITSRARVLTLNPLDTGGLTQ-----LLDR 183 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 + G + L DE R A+ E GD R LN +E + D L PE L I Sbjct: 184 AEQHCGVQLNLTDEARIALFEQAGGDGRYFLNMVEDLL-----DAPAMEPLAPEDLRRIL 238 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 R A +D +GD Y+L SA KS+RGS PDAALY+ AR++ AG DP ++ RR L +ASE Sbjct: 239 SRRIANYDRQGDGHYELASAFQKSIRGSDPDAALYYGARLVQAGEDPRFILRRLLVMASE 298 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 +V ADP + V AA D F VG E + A+AQAIV +A APKSNAVY A+K A+A A Sbjct: 299 EVAMADPTILGVVAAALDTFQHVGMPEAKYALAQAIVAVATAPKSNAVYLAWKQAMALAE 358 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 P+ P + NAPT+L + +G+ +Y Y+HD NA++A + Y+P E+ + R+Y P R Sbjct: 359 ATPNVRPPRRILNAPTELHRSLGFKTDYEYSHDWPNAFSA-QNYWPDELGRHRFYAPNER 417 Query: 422 GLEGKIGEKLAWLAEQDQ 439 G E I ++ + Sbjct: 418 GFEATIKRRVEHWNGLRE 435 >UniRef50_P40151 DNA-dependent ATPase MGS1 n=12 Tax=Saccharomycetaceae RepID=WRIP1_YEAST Length = 587 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 170/429 (39%), Positives = 250/429 (58%), Gaps = 28/429 (6%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAA-GKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 + PL+ ++RP+ L Y+GQQH+L+ L + I+ G + SMILWGPPG GKT+LA ++ Sbjct: 131 SHLPLSEKLRPKELRDYVGQQHILSQDNGTLFKYIKQGTIPSMILWGPPGVGKTSLARLL 190 Query: 71 ARYANAD-----------VERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRF 118 + A + SA + +E+R E++++ RRT+LF+DE+HRF Sbjct: 191 TKTATTSSNESNVGSRYFMIETSATKANTQELRGIFEKSKKEYQLTKRRTVLFIDEIHRF 250 Query: 119 NKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ-- 176 NK QQD LPH+E+G I IGATTENPSF+LN+AL+SR +++L+ L+ ++ VL++ Sbjct: 251 NKVQQDLLLPHVENGDIILIGATTENPSFQLNNALISRCLIFVLEKLNVNELCIVLSRGI 310 Query: 177 AMEDKTRGYG---GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLK 233 A+ +K R + L + +L GD RRALN LEM+ + + L Sbjct: 311 ALLNKCRKQVWNIENPLKLSRSILEYVVDLSVGDTRRALNMLEMIEVSTRERKADEEELS 370 Query: 234 PELLTEIAGERSAR-----FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP 288 + + +I S+ +D KGD YD ISA HKS+RG +A+LY+ AR++ G DP Sbjct: 371 IDDVRDIIKNNSSNGLNTYYDPKGDNHYDTISAFHKSIRGGDENASLYYLARMLQGGEDP 430 Query: 289 LYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNA 348 LYVARR + IASED+G D + +A+AA D +VG E + A+AQ V LA APKS Sbjct: 431 LYVARRMIRIASEDIGLRDSSLLPLAVAAHDAVMKVGLPEADLALAQCCVALARAPKSVE 490 Query: 349 VYTAFKAALADARER----PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEV 404 +Y A+K A E ++P+H+RNAPTKLM+E+GY + Y+Y D + Sbjct: 491 LYRAWKKLRAMMSENMYSLASSEIPMHIRNAPTKLMEELGYHKGYKYNPDYIEGKV-QQD 549 Query: 405 YFPPEIAQT 413 YFP E+ + Sbjct: 550 YFPKEVLEK 558 >UniRef50_A5DW03 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DW03_LODEL Length = 839 Score = 446 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 170/465 (36%), Positives = 243/465 (52%), Gaps = 58/465 (12%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L +IGQ+ L+ PL I+A + S +LWGPPG GKTT+A +IA+ Sbjct: 182 PLAHRVRPKTLDDFIGQEKLVGENAPLRNLIQADLIPSFLLWGPPGCGKTTIARIIAKST 241 Query: 75 NADVERISAVTSGVKEIREAIERA-RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + +S S K +++A +A + G+RTILF+DE+HR+NK+ QD LP IE G Sbjct: 242 DYRYVELSGADSNAKSLKDAFAQADNLKKLTGQRTILFLDEIHRYNKAVQDLLLPVIERG 301 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED----KTRGYGGQD 189 T T IGATTENPSF LN+ALLSR ++++ L+T + ++L +A+ D + + Sbjct: 302 TCTVIGATTENPSFNLNNALLSRLHTFVMEPLTTTAVVRILHRALYDINQLRKNLFQLHY 361 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADM---------------------------- 221 + L + IAEL GD+R ALN LE + Sbjct: 362 MTLENGAFTYIAELCMGDSRVALNILETVNAYLSSAKFKTELQTKVAQETKPQEEQARDE 421 Query: 222 -------------------AEVDDSGKRVLKPELLTEIAGERSAR--FDNKGDRFYDLIS 260 G + LL +I R+ +D GD YD+IS Sbjct: 422 KVEDRHHGREGRGNHEEEGLTTPKQGVIKVSEYLLRQILQTRNFHQLYDRNGDGHYDVIS 481 Query: 261 ALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDC 320 A HKSVRGS DAA+++ ++++ G DPL++ RR + IASED+G D + +AA + Sbjct: 482 AFHKSVRGSNADAAIFYLVKMLSGGEDPLFILRRMIVIASEDIGLRDSSCLPFMVAAKEA 541 Query: 321 FTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD---YDVPVHLRNAPT 377 VG EGE +A LA APKS Y + + A A +E P+ VP HLRNAPT Sbjct: 542 VEFVGMPEGEIILAHCANKLARAPKSTKSYRSLRTAQAYIQEHPEITRLPVPFHLRNAPT 601 Query: 378 KLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 K MKEMG+G EY+Y N ++YFP + + ++ T+ G Sbjct: 602 KFMKEMGFGDEYKYNPRYENGIVR-QLYFPEGMEEPKFLEDTHLG 645 >UniRef50_B1KXC3 ATPase, AAA family n=17 Tax=Clostridium RepID=B1KXC3_CLOBM Length = 416 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 142/426 (33%), Positives = 226/426 (53%), Gaps = 10/426 (2%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA MRP+ L ++GQ+H+L+ KPL ++ + + I +GPPGTGKTTLA ++A Sbjct: 1 MRPLADLMRPKKLEDFVGQKHILSENKPLYNLMKNKSICNSIFYGPPGTGKTTLANIMAN 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 Y + R++A T+ +K+I+E N +L++DE+ F K QQ A L IED Sbjct: 61 YVDKKFYRLNATTASIKDIQEITSSINSLLNYS-GVVLYIDELQHFTKKQQQALLEFIED 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G + I +TTENP F ++ A+LSR ++ K L+ EDI L +A+ G +I Sbjct: 120 GRVILIASTTENPYFVIHKAILSRCNIFQFKPLNREDIILGLEKAINK--LIDKGINIKY 177 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 E+ I E+ GD R+A N LE+ + G + E + + R D G Sbjct: 178 SFESLEYIGEICQGDYRKAYNILELAVN----SHCGFNIEITLDYIESLAQSNIRADATG 233 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D +Y+++SA KS+RGS DAA+++ AR+I +G D + RR + +ED+G A P A+ Sbjct: 234 DEYYNILSAFQKSIRGSDADAAVHYLARLIKSG-DITSITRRLSVMVAEDIGLAYPNALT 292 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + + + +VG E + +++ +YLA PKSN+ Y A K A+ D DVP +L Sbjct: 293 IVNSGIELALKVGFPEAQIILSEITIYLATLPKSNSAYIAIKNAMRDLESVNFGDVPDYL 352 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +++ K +G + Y+Y HD N Y + E Y P E+ YY + E + + Sbjct: 353 KDSHYHGAKNLGV-EGYKYPHDFNNHYVSQE-YLPKELKDKVYYIAQHNKYEENLKKYWE 410 Query: 433 WLAEQD 438 + + Sbjct: 411 NIKKFK 416 >UniRef50_B2THM3 ATPase, AAA family n=25 Tax=Clostridiaceae RepID=B2THM3_CLOBB Length = 428 Score = 443 bits (1141), Expect = e-123, Method: Composition-based stats. Identities = 149/423 (35%), Positives = 227/423 (53%), Gaps = 10/423 (2%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 PLA MRP + ++GQ+H+L PL I++ + + I +GPPGTGKTTLA ++A+ Sbjct: 1 MSPLADLMRPSKIEDFVGQRHILGENTPLYNLIKSKKICNCIFYGPPGTGKTTLANIMAK 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 Y + +++A T+ VK+I+ N +L++DE+ FNK QQ + L IED Sbjct: 61 YVDKKFYKLNATTASVKDIQNITNELDNLLNYA-GVVLYIDELQHFNKKQQQSLLEFIED 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT I +TTENP F ++ A++SR ++ + L DI L ++++ G ++ Sbjct: 120 GRITLIASTTENPYFVIHKAIISRCNIFAFEPLIISDIIVGLEKSLDKLIN--EGIEVTY 177 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 +E + IAE+ GD R+A N LE+ + E G+ + R DN G Sbjct: 178 SNEALKYIAEISQGDYRKAYNILELSIN----SQMTLHKEISVDYIEKLGQSNMRADNSG 233 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D FY+L+SAL KS+RGS DAA+++ AR+I GG+ + RR I +ED+G A P A+ Sbjct: 234 DEFYNLLSALQKSIRGSDSDAAIHYLARLI-KGGNIAAIIRRISVIVAEDIGLAHPNALT 292 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 V + D +VG E +A+ ++YLA PKSN+ Y A +A+ D DVP HL Sbjct: 293 VVNSGLDLAMKVGFPEARIVLAELVIYLATLPKSNSAYLAINSAMNDLESINFGDVPKHL 352 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 ++ + +G G Y+Y HD N Y E Y P E+ + RYY N E I + + Sbjct: 353 KDGHYAGAESLGVG-GYKYPHDYPNHYIKQE-YLPTELKKKRYYIEQNNKYEENIRKYWS 410 Query: 433 WLA 435 + Sbjct: 411 SIK 413 >UniRef50_A4EPD3 ATPase n=3 Tax=Rhodobacteraceae RepID=A4EPD3_9RHOB Length = 437 Score = 439 bits (1130), Expect = e-122, Method: Composition-based stats. Identities = 165/445 (37%), Positives = 243/445 (54%), Gaps = 13/445 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L + QPLAA +RP +L + +GQ+ L A G L R I A L S++L+GPPG Sbjct: 1 MSDLFDVGREQENQPLAAALRPRSLDEVVGQKTLTAKGSVLRRRIAANQLGSIVLYGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 GKT++A + N + +++ A +GVK+IR+ + AR ++FVDEVHRF+ Sbjct: 61 VGKTSIARAVGEMLNKEFKQLHATRAGVKDIRQLADEARIRPI-----LIFVDEVHRFSA 115 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +Q D L E+GT FIGATT+NP L AL+SR+ + L+ ++ ED+E VL + +E Sbjct: 116 TQADDLLSICEEGTADFIGATTQNPYTALPKALVSRSTILKLEPIAIEDMEAVLARGLEH 175 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 G ++VL E R IA GDAR AL TLE +A DSG + ++L E+ Sbjct: 176 LAEM--GIEVVLAPEQLRIIAGRSGGDARSALTTLESLA--IGHGDSGSVKVTDDMLEEV 231 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 D GD+ YD+ISA KS+RG P+A LYW AR+I G DP ++ARR + AS Sbjct: 232 YRAAPVNHDRSGDQHYDIISAFIKSMRGGDPEAVLYWLARLIHGGEDPRFIARRIMIQAS 291 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVG AD A+Q A+AA +G E +A A +++ APKS + AAL+ Sbjct: 292 EDVGLADNTALQTAVAAAQAVEMIGYPEARIILAHAALHVTRAPKSGSANHGISAALSAV 351 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 P VP+HLR+A + +++G+G YR H++ + + Y P + R+Y Sbjct: 352 GSEPPLPVPLHLRDAHYQGAEQLGHG-GYRSPHNDPRGWV-DQTYAP-GMQPGRFYQSEA 408 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKR 445 R ++ E+ P+ + Sbjct: 409 REA-ATFEKRADEYWERVTGRPVPK 432 >UniRef50_C5NXY2 Replication-associated recombination protein A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXY2_9BACL Length = 415 Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats. Identities = 136/419 (32%), Positives = 219/419 (52%), Gaps = 13/419 (3%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + L ++RP + IGQ HL+ GK L + +E+ + S IL+GPPGTGKT++A +A Sbjct: 1 METLINKLRPSKIDDIIGQHHLIGDGKVLTKIVESKKMFSFILYGPPGTGKTSIANALAN 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + + ++AV K++ IE ++ ++ IL +DE HR K QD LP IE Sbjct: 61 ELDYKFKILNAVNCTKKDLTAVIEESK----RFKKVILLLDEFHRLTKPMQDILLPEIEF 116 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 I IG TT NP +N A+ SR ++ L+ +S +DI + L + +K +D+ + Sbjct: 117 DNIYVIGCTTNNPYHTVNPAIRSRLIIFELQQVSNDDIYEYLKKISNNKE--IFPKDLKI 174 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ + IA +GD R +LNT E++ +++ + ++ + L ++ + +D G Sbjct: 175 EDDVFKTIALNSSGDLRFSLNTFEILYNLSNEGE----IITKDKLLNLSLGKFKAYDKDG 230 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D FYD+ISA KS+RGS DA+LY+ A +I +G D + RR IA ED+G A+P Sbjct: 231 DAFYDIISAFQKSIRGSDVDASLYYLALLIDSG-DLDTIYRRMSVIAYEDIGLANPNIGP 289 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 AA + +G E +A A++ LA + KSN+ Y A AL + + P + +P HL Sbjct: 290 FVHAAIESAKMLGLPEARIPLANAVIQLALSLKSNSAYMAIDNALHETKTNPKFIIPDHL 349 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP-TNRGLEGKIGEK 430 R+A ++ G Y+Y H Y + Y P + +Y P TN E + + Sbjct: 350 RDAHYYGADKLNRGVGYQYPHSHPTGYIKQQ-YLPDNLVGRTFYTPKTNNKNEQNLAQY 407 >UniRef50_UPI00016B2545 recombination factor protein RarA n=3 Tax=candidate division TM7 RepID=UPI00016B2545 Length = 400 Score = 437 bits (1124), Expect = e-121, Method: Composition-based stats. Identities = 168/398 (42%), Positives = 239/398 (60%), Gaps = 15/398 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA MRP+ + IGQ+HLL+ GK L + I+ S+ILWGPPG+GKTTLA +IA+ Sbjct: 5 PLAELMRPQKIKDIIGQRHLLSEGKILYKIIKQKEPVSLILWGPPGSGKTTLARIIAKET 64 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 A+ +SAVTSG KEI IE ARQN N RT+LFVDE+HRF+K QQDAFLPHIE G Sbjct: 65 EANFMELSAVTSGKKEINNIIEIARQNWNLQLRTVLFVDEIHRFSKVQQDAFLPHIESGL 124 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 IT IGATTENPSFE+ + LLSR +V LK L +DI+Q+LT+A+E + ++ + Sbjct: 125 ITLIGATTENPSFEIITPLLSRVKVMTLKPLEDKDIQQILTKAIEKLAKSK-----LVTN 179 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 E+ +A + +GDAR AL LE++ + K + P+ + + +D G+ Sbjct: 180 ESIEYLAHISSGDARVALGNLELVLGI------NKGKITPDTINIALQKIPPTYDKNGNY 233 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 YD ISA KS+RGS +A LY+ AR+I AG DP ++ARR + ASED+G A+ +A Sbjct: 234 HYDTISAFIKSMRGSDVEATLYYLARMINAGEDPKFIARRMIIFASEDIGLVGNGALSLA 293 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 +A + RVG E + LA + KS V A + ++ P+ +P+HLRN Sbjct: 294 VATFQAVERVGLPEASYNLFHCATALARSNKSREVTNLMHNAQSLVKKFPNIQIPLHLRN 353 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 + + + K++GYG+ Y++ + + + P EI Sbjct: 354 STSAITKDLGYGKNYKW----KAGFKHEKGFLPKEILD 387 >UniRef50_A6LJD0 AAA ATPase, central domain protein n=3 Tax=Thermotogaceae RepID=A6LJD0_THEM4 Length = 410 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 150/421 (35%), Positives = 235/421 (55%), Gaps = 23/421 (5%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 L+ +RP+ ++IGQ+HL + AIE+G+L S + +GPPG GKT+ E+I + + Sbjct: 4 LSEILRPKGFEEFIGQEHLFGEKGLIRLAIESGNLFSAVFYGPPGCGKTSTLEIIRKKTD 63 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 ++ +A + ++++ ++ A++ + ++ ++FVDE+HRFNK QQD FLP IE G Sbjct: 64 FEIYHFNAAVTSTIDVKKVLDYAQKVKGL-KKMLIFVDEIHRFNKKQQDIFLPGIERGDY 122 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 FIGATTENP +N ALLSR +V K L +I+++L +A+ ++I + + Sbjct: 123 IFIGATTENPFKMINPALLSRIKVIAFKKLKVFEIKKLLERAI-------SVKNIDVMES 175 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 I + +GDAR A+N ++++DMA+ GK ++ E++T GE + +K Sbjct: 176 VMDFITRISDGDARFAINIYDVLSDMAKA--LGKEIVDDEIVTLYGGEVKMVYTSK--EH 231 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 Y+L SA KS+RGS PDAALY+ AR++ G DP ++ARR +ASEDVG ADP A+ +AI Sbjct: 232 YELASAFIKSIRGSDPDAALYYMARMLEVGEDPRFIARRLAILASEDVGLADPMAILIAI 291 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 A VG E +++ ++YL+ APKSN+ A A+ ARE + VP +L N Sbjct: 292 ATAQAVELVGLPECVLNLSECVIYLSLAPKSNSSTLAISKAIESARETMNLSVPFNLLNV 351 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 Y+ H + Y P I+ +Y P G E ++ E L L Sbjct: 352 K---------DSGYKNPHHYGG--FLKKSYLPKGISDKVFYIPKEIGKEKRLKEILEKLW 400 Query: 436 E 436 E Sbjct: 401 E 401 >UniRef50_D1B930 AAA ATPase central domain protein n=2 Tax=Synergistaceae RepID=D1B930_THEAS Length = 421 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 177/423 (41%), Positives = 241/423 (56%), Gaps = 17/423 (4%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 ++ + PL RMRP +L +Y+GQ+HLL G PL I + L S IL+GPPG GKTT Sbjct: 1 MEDRPSLMTPLPERMRPRSLDEYVGQEHLLGEGGPLRLLISSNSLRSCILYGPPGVGKTT 60 Query: 66 LAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQD 124 L ++A ++ I+AVTS + ++R +RA + G I FVDE++ FN QQ+ Sbjct: 61 LVRLMATTTGRELLEINAVTSKLSDLRALADRAASLTSMGFEPPIAFVDEIYHFNSQQQN 120 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 LP +E G + +G TTENP FE+N LLSR VY LK L + QVL +A+ED RG Sbjct: 121 VLLPFVESGQMVLVGTTTENPWFEVNKTLLSRMLVYELKPLEDRHVIQVLVRALEDFDRG 180 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 G + + D+ A+A GD R+AL LE +A V SG RV+ E + AG Sbjct: 181 LGRLGLSVTDDALAALAASSQGDLRQALVRLETVASA--VAASGGRVMGEEQVAAFAGRA 238 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVG 304 R+D K D+ Y +ISA KSVRGS PDAA+YW AR++ +G DP ++ARR +A+E+VG Sbjct: 239 FKRYDRKADQHYGVISAFIKSVRGSDPDAAVYWLARMLESGEDPRFIARRICILAAEEVG 298 Query: 305 NADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP 364 ADP A+ VA AA F RVG EG+ +A+A +Y+A APKSN VY A + A + Sbjct: 299 LADPMALVVAQAAASAFDRVGLPEGDMILAEAALYIAAAPKSNRVYRAIRDAREAVAKGD 358 Query: 365 DYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLE 424 +VP HL + YRY HD + + Y P R+Y P++RG E Sbjct: 359 VLEVPEHL----------LPGSPNYRYPHDSPSGWVPS-SYLPE---PRRFYRPSDRGGE 404 Query: 425 GKI 427 KI Sbjct: 405 LKI 407 >UniRef50_UPI00015B415D PREDICTED: similar to werner helicase interacting protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B415D Length = 522 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 163/437 (37%), Positives = 234/437 (53%), Gaps = 38/437 (8%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 S S D PLA +MRP ++ Y+GQ+H+L L + + + ++ILWGPPG Sbjct: 97 STRSKDTKPKDSIPLAEKMRPNSIMSYVGQKHVLGPETMLYQLLSKTEIPNIILWGPPGC 156 Query: 62 GKTTLAEVIARYA------NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEV 115 GKT+LA VIA ++SA SG+ ++++AI A GRRT++F+DE+ Sbjct: 157 GKTSLANVIANTCQHCPGGKYRYVKLSAAMSGISDVKDAITIASNELKFGRRTVMFMDEI 216 Query: 116 HRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLT 175 HRFNK+QQD FLPHIE GTI IGATTENPSF LN+ALLSR RV +L+ L+ E++ ++L Sbjct: 217 HRFNKTQQDTFLPHIESGTIILIGATTENPSFSLNAALLSRCRVIVLEKLTIENLTEILI 276 Query: 176 QAM----------EDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA-----D 220 +A+ E + ET + +AE +GDAR AL LE+ Sbjct: 277 RAIKAAGGAVHDFEKPPNASINNKFFIDRETVKWLAETSDGDARIALGGLELAIHSKVPS 336 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 SG + + + + + +D KGD+ YD+ISALHKSVR S +AALYW R Sbjct: 337 SEGSSSSGLNFISLDDVKDSLKKTHMLYDKKGDQHYDMISALHKSVRASDDNAALYWITR 396 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DP+Y+ RR + +A+ED+G DP+A+ VA+ +G E + +AQ +YL Sbjct: 397 MMAGGEDPVYIGRRLVRMATEDIGLEDPKALGVAVHTMQSCKMLGMPECDVLLAQCAIYL 456 Query: 341 ACAPKSNAVYTAFKAALADARERPD--YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS + + +AA D VP+HLRN PT ++ + Sbjct: 457 ARAPKSRLMEDSLRAAQRVVANYKDAQLPVPLHLRNIPTSILGKKDRSAL---------- 506 Query: 399 YAAGEVYFPPEIAQTRY 415 Y P EI + Sbjct: 507 -----PYMPEEIKNLDF 518 >UniRef50_C6HUJ9 AAA ATPase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUJ9_9BACT Length = 451 Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats. Identities = 143/430 (33%), Positives = 212/430 (49%), Gaps = 7/430 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PL RMRP +L +GQ+ LL R I G SM+L+GPPGTGK+ E++ R Sbjct: 14 PLPYRMRPSSLEDLVGQEALLGPQGLFRRFIAEGRWPSMVLFGPPGTGKSGFVELLPRLL 73 Query: 75 -NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + ++A T+GV ++R + R + R G + ++ +DE+H ++KSQQ+ L +E G Sbjct: 74 SDHTFAHLNATTAGVADLRPELARGERRRREGGQHVVVLDEIHTWSKSQQEVLLSGVETG 133 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I +G + P L L SR ++ + L + +L + + R G + L Sbjct: 134 QIILLGLSNTTPYAALIPPLASRLLLFPFQPLDENALSTLLDRGLHRLARETHGPPLQLD 193 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 R + GD RR L LE MA + + E + I R+ + D Sbjct: 194 PAARSLLVRYSGGDGRRLLLALESAVLMASGRGGEEFRVGEEDVLAIL-SRAGQVYGDKD 252 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KSVR PDAAL+W AR+I G DPLY+ARR + +A+EDVG ADP+A+ Sbjct: 253 SHYDTISAFIKSVRNYDPDAALHWLARMIEGGEDPLYIARRLVILAAEDVGLADPQALTQ 312 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A++ + VG EG +A V+LA +PKS + Y A ALAD R VP+HLR Sbjct: 313 AVSCFHAVREVGLPEGRIPLAMTTVFLALSPKSISAYQAIDRALADVRGGFVPPVPLHLR 372 Query: 374 NAPTKLM---KEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 + +K E +Y Y D+ + + + P RYY P +RG E ++ E+ Sbjct: 373 DRTSKRAFSRDEATTPLDYLYPPDQPGG-VSPQSHLPEG-ESRRYYLPNDRGRERELKER 430 Query: 431 LAWLAEQDQN 440 + Sbjct: 431 YEAARRLREG 440 >UniRef50_UPI0001C3744E recombination factor protein RarA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3744E Length = 423 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 150/414 (36%), Positives = 233/414 (56%), Gaps = 11/414 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA ++RP+ LA +GQ+H+LA GKPL R I++G + +MI +GP G GKTT+A +IA Sbjct: 4 PLADKIRPKTLADVVGQEHILADGKPLRRIIDSGTVPNMIFYGPSGVGKTTVARIIAENC 63 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + +++ + + +I++ + + +L++DE+ NK QQ + L +IE+G Sbjct: 64 GMSLYKLNGTNASISDIKDVVADIG-TFGSENGILLYLDEIQYLNKKQQQSLLEYIENGD 122 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIE---QVLTQAMEDKTRGYGGQDIV 191 IT I +TTENP F + +A++SR+ V+ K +S E + + + M ++ G + Sbjct: 123 ITLIASTTENPYFSVYNAVISRSTVFEFKPVSAEQLMPAIRRAFRIMSEE----NGYAVE 178 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 D+ + IA GD R+A+NT E+ E D GK + + L +A + R+D Sbjct: 179 ASDDIIKQIAYSCGGDVRKAMNTAELAVVCGEASD-GKVAVTADSLKILAQRSNMRYDRD 237 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 GD+ YD++SAL KS+RGS +AAL++ AR+I AG D + ++RR L IA+ED+G A P+A+ Sbjct: 238 GDQHYDILSALQKSIRGSDENAALHYAARLIEAG-DIISLSRRLLVIAAEDIGLAYPQAI 296 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 + A D ++G E +A+AI+ LA APKSN+ A AA+AD R D P H Sbjct: 297 AITKACVDSALQLGLPEARIPLAEAIILLATAPKSNSAEAAIDAAIADLRSCDALDFPRH 356 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 L+N GQ Y+Y HD N Y + Y P +A YY + E Sbjct: 357 LQNKHFDGKGAAVVGQHYKYPHDYKNHYVKQQ-YLPDALAGHVYYSYGDNKQEQ 409 >UniRef50_A9BGH8 AAA ATPase central domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGH8_PETMO Length = 411 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 144/429 (33%), Positives = 230/429 (53%), Gaps = 25/429 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPL +RP+ + + +G + L + L I+ + S I++G PG+GK+T+ + Sbjct: 5 QPLYEIIRPKKVDEVLGNEKL---KEILKTWIKNKKVRSFIIYGEPGSGKSTIVRALINE 61 Query: 74 AN--ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 DV IS G K+I++ IE+ + +LFVDE+HR NK++QD L +E Sbjct: 62 IKDYYDVFSISGAIEGKKKIKDIIEQKNNLFT--KPKLLFVDEIHRLNKAEQDTLLLSVE 119 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 G +T IGATTENP+ +N ALLSR V+ K L T+D E++ Q + +D+ Sbjct: 120 TGELTLIGATTENPAISVNPALLSRVLVFKTKELITDDYEKLFQQIEDYY------KDLK 173 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + E R+A+ E D RR +N +E +++G + E L + G R Sbjct: 174 ITKEARKALIEYAGNDIRRIMNLIETA------NEAGINSIDLEFLKDFTG---YRLTYD 224 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 + Y ISA KS+RGS DAAL + A ++ +G DP+Y+ARR + +++EDVG ADP A+ Sbjct: 225 KNAKYSFISAYIKSMRGSDVDAALLYLAYMLESGEDPMYIARRMVILSAEDVGLADPNAL 284 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A++A VG E +++A +YL +PKSN+ Y A+ A + ++++P Sbjct: 285 NIAVSAMIATEHVGYPECYLPLSEATMYLCSSPKSNSAYLAYAKAKEFISQ-NNFEIPPK 343 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 L N K M++ G+G+ Y+Y HD E Y P T+++ P G+E +I E+L Sbjct: 344 LINPLNKRMEKQGFGEGYKYPHDYGG--FVRESYMPEGFESTQFFTPKEIGIEKRIKERL 401 Query: 432 AWLAEQDQN 440 L + +N Sbjct: 402 KDLWKDKKN 410 >UniRef50_D1B0W0 AAA ATPase central domain protein n=5 Tax=Campylobacterales RepID=D1B0W0_SULD5 Length = 396 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 127/419 (30%), Positives = 211/419 (50%), Gaps = 31/419 (7%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 RP+ + + GQ+HL P + +++G + + +GP G GKTTLA ++A Sbjct: 9 FRPKVIEELSGQKHLSGENSPFRKLLKSGSMSHALFFGPAGVGKTTLARIVANTLQLPFY 68 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 + A + V+EIR+ + + +R A ++ ++F+DE+HR +K+QQ+ L +E+ IG Sbjct: 69 ELDATSIKVEEIRKILSQ---HRGALQKPLIFIDEIHRLSKTQQEVLLLPMENHEAIVIG 125 Query: 140 ATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRA 199 A+TENP F L+S + SR ++ L +D+E +L + E + + +E R Sbjct: 126 ASTENPYFVLSSGIRSRMMLFEFYPLEMKDMEAILERVHEKI-------EFQIDEEAREY 178 Query: 200 IAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLI 259 + GD+R LN LE + + + L + + + Y+LI Sbjct: 179 LIRSSAGDSRSFLNLLEFALKV-------DLHVNMQTLKALRPSALKDGVSSDNTHYNLI 231 Query: 260 SALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 SA+ KSVRGS DAALY+ AR+I G P ++ARR + +ASED+GNA+P A+ +A + Sbjct: 232 SAMIKSVRGSDVDAALYYLARLIDGGESPDFIARRLVILASEDIGNANPNALNLASSTLM 291 Query: 320 CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKL 379 +++G E ++Q ++YLAC+PKSN+ Y A ALA + +VP HL++ K Sbjct: 292 SVSKIGYPEARIILSQCLIYLACSPKSNSAYNAINQALAYVKNEKVLNVPEHLQSPSPK- 350 Query: 380 MKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQD 438 Y Y HD + + Y + +Y G E + E L + + Sbjct: 351 --------GYLYPHDF-GGWVEQD-YLEKPL---HFYDNLPIGFERTMAEWLVKIKIKK 396 >UniRef50_UPI0000DB7733 PREDICTED: similar to Werner helicase interacting protein isoform 1 n=2 Tax=Apocrita RepID=UPI0000DB7733 Length = 433 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 143/421 (33%), Positives = 220/421 (52%), Gaps = 26/421 (6%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA +MRP YIGQ+ ++ + L + + GH+ SMI WGPPG GKT+L +I++ + Sbjct: 15 LAEKMRPACFHDYIGQEKVVGSNTILQQLLTKGHIPSMIFWGPPGCGKTSLTNIISKISK 74 Query: 76 ------ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 ++ +SA +SGV I+ I + + + + I+ +D++HRFNK QQD FLPH Sbjct: 75 EMHGEKVNIINLSATSSGVSNIKNIINKTKTE-SKFNQIIVIMDKIHRFNKLQQDIFLPH 133 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT------- 182 +E GT T IG TTENPS+ LNSALLSR R++ L L+ +I ++L +A+ Sbjct: 134 VETGTFTLIGTTTENPSYSLNSALLSRCRIFALNKLTMLNIVEILCKAISSINGEIYNFS 193 Query: 183 -RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM--AEVDDSGKRVLKPELLTE 239 + + + +AE+ +GDAR ALN LE+ + + +S + E + E Sbjct: 194 LKNFSKPHFFINKTAIDWLAEVCDGDARVALNDLELAIKIKISNKLNSNFVSITLEDVKE 253 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + D + + L SALHKS++ +A+LYW ARI+ DP+ +ARR + I+ Sbjct: 254 SVKQTHMLSDKQSNNIQHLYSALHKSIKAGKENASLYWLARIMDIKEDPVDIARRLIRIS 313 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SEDVG AD A+ +AI +G E + + Q +VYL APKS VY A K Sbjct: 314 SEDVGLADLDALGIAIHTLHGCEMIGMPECDVILTQCVVYLTRAPKSQLVYNALKRVENI 373 Query: 360 A--RERPDYDVPVHLRNAP--TKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 + P VP+H+R+ K+ G+ +E +E E Y P + + Sbjct: 374 IINHKGPQPVVPLHIRDRSGQEKIHTTFGFHKENVLTKEEN-----VENYLPLGLLHANF 428 Query: 416 Y 416 + Sbjct: 429 F 429 >UniRef50_C7H148 ATPase, AAA family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H148_9FIRM Length = 411 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 148/412 (35%), Positives = 227/412 (55%), Gaps = 28/412 (6%) Query: 21 RPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVER 80 RPE L +IGQ+H L + AI+ G S + +GP GTGKTTLA +IA+ + + Sbjct: 9 RPERLEDFIGQEHFLKKNALVYNAIKEGRFESAVFYGPSGTGKTTLARIIAKMQDDSFIQ 68 Query: 81 ISAVTSGVKEIREAIERA--RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFI 138 I+A G+ E+++ + A R + T L+VDE+HR+NKSQQD+ L +E+G I I Sbjct: 69 INAADVGISELKKILAEAKDRFYGIISKSTYLYVDEIHRWNKSQQDSLLSALEEGYIKVI 128 Query: 139 GATTENPSFELNSALLSRAR-VYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETR 197 +TTENP FE+N+ +LSR R +Y K L+ +DI ++L + ++ G+ I ++ Sbjct: 129 ASTTENPFFEINNQILSRIRNIYEFKPLANDDIVKLLKRGVD--IFAGDGRVIDYDEDAL 186 Query: 198 RAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYD 257 IAE NGDAR AL+TL + + + G+ + E + EI +R NK D Y+ Sbjct: 187 MLIAEKSNGDARIALDTLGFILNSLK----GEDRITEEKVYEITYDRQYMKFNKLDDKYN 242 Query: 258 LISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAA 317 + SALHKS+RGS PDAA+++ AR++ G D + RR L ASEDVG A P+A+ + + Sbjct: 243 VFSALHKSMRGSDPDAAVHYLARLLQGGEDVKVIGRRLLVAASEDVGLAYPQAIGIVRSC 302 Query: 318 WDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPT 377 + +G E ++QA+V ++ APKS + Y A +A+ + + DVP H+RN Sbjct: 303 VEAAHMLGMPEARIPLSQAVVLISLAPKSRSTYNAINSAIEEIKTGRIDDVPDHIRN--- 359 Query: 378 KLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI--AQTRYYFPTNRGLEGKI 427 H+ +A + + P + RYY P++ GLE I Sbjct: 360 --------------FHNNNDANRPADQFLPDNLYKKGVRYYVPSDNGLEKDI 397 >UniRef50_A0RRQ8 ATPase, AAA family n=3 Tax=Campylobacter RepID=A0RRQ8_CAMFF Length = 397 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 126/421 (29%), Positives = 206/421 (48%), Gaps = 32/421 (7%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 L+ RP N+ +GQ+ ++ + + I++ + + +G G GKTT+A++IA+ N Sbjct: 3 LSNDFRPNNINDMVGQKDIV---ELFSKFIKSKKIPHSLFFGATGCGKTTMAKIIAKQMN 59 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + + ++IR+ I + + ++F+DE HR +K+QQ+ L +E G Sbjct: 60 YEFFELDGANLKSEDIRKIISKFE---TTLYKPLIFIDEFHRLSKTQQETLLIPMEKGKC 116 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 +GATTENP F ++S + SR ++ K LS +++ +LT+ + +E Sbjct: 117 IVMGATTENPKFVVSSGIRSRMMIFEFKPLSHDELTILLTKVQNVIK-------FEITNE 169 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 + + GDAR LN LE + + +L + R + + D Sbjct: 170 AKDYLINSSGGDARSLLNLLEFALSA-------DKSIGLNILKTLRSHRVSEGVSNSDTH 222 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 Y+L SAL KS+RGS DA++Y+ AR+I G +P ++ARR + ASED+GNA+P A+ +A Sbjct: 223 YELTSALIKSLRGSDIDASIYYLARLIQGGEEPAFLARRMVIFASEDIGNANPNALNLAT 282 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 +++G E +AQ VYLA +PKSN+ Y A A+ RP VP +L N Sbjct: 283 NVMLAVSKIGYPEARIILAQCAVYLASSPKSNSSYKAINDAIEFVENRPALPVPKYLIN- 341 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 T K EY Y HD + + Y Q ++Y G E + E + L Sbjct: 342 -TDKAKS-----EYLYPHDF-GGWVE-QKYM---STQVKFYKSNAIGFEKTLDEWITKLK 390 Query: 436 E 436 E Sbjct: 391 E 391 >UniRef50_B3PM47 ATPase, related to the helicase subunit of the Holliday junction resolvase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM47_MYCA5 Length = 402 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 136/422 (32%), Positives = 215/422 (50%), Gaps = 24/422 (5%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA + RP L ++ + + I S I +G PGTGKTT++ ++A Sbjct: 5 LAQKTRPIALDDFVCND---SQRFLFEKIIANDDFRSFIFYGKPGTGKTTISYILASSLK 61 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + +A +++ + + + + N IL +DE+HR NK +QD LP+IE+ I Sbjct: 62 VSFDYFNAA---IEKKEDLVAKLKLN------KILIIDEIHRLNKDKQDILLPYIENDLI 112 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 T TTENP F++N AL SR + +K+ S +D+ + L + + D L DE Sbjct: 113 TIYATTTENPYFKVNPALRSRCAIVEIKNPSIDDLSKQLKKIALN-----NQLDSNLSDE 167 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 IA NGD R A+N+L++++ +++ + L + + +I D+ GD Sbjct: 168 IYHFIASQSNGDYRSAINSLDLISTLSKT-----KKLTLDEIKKILPAIQFTGDSNGDAH 222 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 +D +SA HKS+RGS P+AALY+ ++ +G D + RR + A EDVG A+P + Sbjct: 223 FDHLSAFHKSLRGSDPNAALYYGFILVESG-DFDGLFRRMICAAYEDVGLANPNLPVQVM 281 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 A D F R+G EG IA AI+ +A +PKSN+ Y A+ + L D R ++VP HL+++ Sbjct: 282 NAIDAFERLGLPEGYLPIANAILEIALSPKSNSAYLAYHSVLEDLRSGQLFEVPNHLKDS 341 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 K++ G EY Y H+ Y + Y P E+ +YY G E KI E L Sbjct: 342 SYSSAKKLKRGVEYLYPHNFDRHYVKQD-YLPSELKNKQYYCSQKEGFEEKINEYWRKLK 400 Query: 436 EQ 437 + Sbjct: 401 GE 402 >UniRef50_A7ZAZ1 ATPase, AAA family protein n=45 Tax=Epsilonproteobacteria RepID=A7ZAZ1_CAMC1 Length = 394 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 125/422 (29%), Positives = 200/422 (47%), Gaps = 32/422 (7%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA RP+NL + GQ+ + A + I + I +GP G GKT+ A +A AN Sbjct: 4 LALMFRPKNLDEICGQKAVKTA---FLKFIATSKIPHSIFYGPAGCGKTSFARAVASGAN 60 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 D + + R+ ++ N + + F+DE+HR +K+QQ+A L +E+ Sbjct: 61 YDFYEFDGGNLKIDDFRKILKNYENALN---KPLFFIDEIHRLSKTQQEALLIPMENYKA 117 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 IGA+TENP F L+S + SR+ ++ + LS+ D E++L + E + + ++ Sbjct: 118 LVIGASTENPFFTLSSGIRSRSMLFEFRPLSSSDFEELLAKIKEQIS-------FSIDED 170 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 + + + GDAR LN LE + + E L + + D Sbjct: 171 AKEYLFKSSGGDARAMLNLLEFAVTL-------DENVSIENLKTLRQNALKEGAKEDDTH 223 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 Y+L SA KS+RGS +A +Y+ AR+I +G ++ARR ASED+GNA+P A+ +A Sbjct: 224 YELASAFIKSLRGSDENAVIYYLARLIDSGESADFIARRMAIFASEDIGNANPNALNLAA 283 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 + +G E +AQ VYLA +PKSN+ Y A AAL + +P +L+N Sbjct: 284 STLSVVKEIGFPEARIILAQCAVYLASSPKSNSSYNAINAALRYVQTEEILKIPPYLKN- 342 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 TK K+ Y Y HD + + Y + +Y G E + E L + Sbjct: 343 HTKESKD------YLYPHDF-GGWVE-QKYLEKPLV---FYKSKGIGFEKTLNEWLEKIR 391 Query: 436 EQ 437 + Sbjct: 392 SK 393 >UniRef50_UPI0000E4A039 PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A039 Length = 672 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 156/438 (35%), Positives = 222/438 (50%), Gaps = 72/438 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 F+PLA RMRP + IGQ L A L R ++ G++ SMI WGPPG GKT+LA VIAR Sbjct: 269 FRPLAERMRPYTMDTLIGQNKALGATGTLRRLLDVGNIPSMIFWGPPGCGKTSLANVIAR 328 Query: 73 YAN----ADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNKSQQDAFL 127 A SA TS V +++ A+E AR + RR ILF+DE+HRFNK+QQD FL Sbjct: 329 QAKVRNTHRFITFSATTSNVSDVKSAVEIARNEQRMYRRKTILFIDEIHRFNKTQQDTFL 388 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 H+E+GTI IGATTENPSF +NSALLSR RV +L+ LS E I +L +A+++ G Sbjct: 389 LHVENGTIILIGATTENPSFRVNSALLSRCRVVVLEKLSPESIMLILERALKEGQVGIEN 448 Query: 188 QD----------IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR------- 230 + I + E +A L +GDAR ALN+L+M+ D+A+ G++ Sbjct: 449 AEHLHKTCWSTTISIEREALCLLANLCDGDARSALNSLQMVLDVAKGSTGGQQADASKVL 508 Query: 231 ---VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGD 287 V+ + + + +D G+ Y+ SAL KS+R S +AA+YW R++ G D Sbjct: 509 RSSVITIDQIRDSLQRSHISYDKSGEEHYNCASALQKSIRASDANAAVYWLGRMLVGGED 568 Query: 288 PLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSN 347 PLY+ARR + ASED +A +YL+ APKS Sbjct: 569 PLYIARRLVVCASED----------------------------LNLAHCAIYLSRAPKSR 600 Query: 348 AVYTAFKAALADAR--ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAG--- 402 V T + + + P +P+HL+ TK Y+ + + G Sbjct: 601 QVATVYARVKDCLKNHQGPTPPIPLHLQTPATK----------YQLVRNTLGGWGKGRVM 650 Query: 403 ----EVYFPPEIAQTRYY 416 E + P +A ++ Sbjct: 651 AGGYEGHMPESLAGLDFF 668 >UniRef50_A9NGG4 Holliday junction DNA helicase-like ATPase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGG4_ACHLI Length = 412 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 131/421 (31%), Positives = 219/421 (52%), Gaps = 22/421 (5%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA+RMRP+N + GQ HLL+ L + IE S IL+GPPGTGKTT+A++ + Sbjct: 1 MEPLASRMRPKNFDEVYGQDHLLSKHGVLTKMIEKKKYLSFILYGPPGTGKTTIAKLFSD 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + D +A T ++++ ++ + ++ VDE+HR QD LP +E Sbjct: 61 KSMLDTYFFNASTDNKAKLKDILDMTAYH-----DVLIIVDEIHRMKTDIQDYLLPFLES 115 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IG TT NP +N A+ SR +Y +K+LS +DIE + A++ Y DI L Sbjct: 116 GKAIMIGLTTLNPYQSINMAIRSRCHLYEIKALSDKDIEAAILNAIQ-----YLDHDIHL 170 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ AI N + R ALN LE + + + + ++ ++AG+ D+ Sbjct: 171 TDDALAAIIRASNSEIRSALNLLESASLVV----DDGQKITSNIIRKLAGKPQLSLDDHE 226 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + +++++SAL KS+RGS DA++++ AR++T G D + RR + IA ED+G A+P Q Sbjct: 227 NHYFEMLSALQKSIRGSDVDASIHYLARLLTLG-DLEIIFRRLIVIAYEDIGLANPTMGQ 285 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +AA G E ++ +V +A +PKSN Y+A A+ D + +P H+ Sbjct: 286 KVLAAIQAAKMTGLPEARIPLSVIVVDMALSPKSNTAYSALDKAMEDFQNGLAGPIPKHI 345 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR-GLEGKIGEKL 431 N K +K+ + Y+Y H++ + + + + P + YY P + E + ++L Sbjct: 346 DN---KYIKQ--HPDSYKYPHNDPGSLNS-QTHLPDNLLDKTYYVPKDESAYEKALKDRL 399 Query: 432 A 432 Sbjct: 400 K 400 >UniRef50_B1AII3 ATPase, AAA family n=14 Tax=Ureaplasma RepID=B1AII3_UREP2 Length = 408 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 128/414 (30%), Positives = 201/414 (48%), Gaps = 20/414 (4%) Query: 22 PENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERI 81 P ++ +GQ++LL + R + + ++I +GPPG GK++LA+V+A+ Sbjct: 12 PHSIDDIVGQKYLLDEIGIIRRMVNHHQVFNLIFYGPPGVGKSSLAKVLAQDLKVPFAFF 71 Query: 82 SAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGAT 141 + V K++ + IE+A N I+ +DE+HR NK +QD LP IE I T Sbjct: 72 NPVVDSKKQLMQIIEQALDLNNF----IIIIDEIHRLNKDKQDILLPIIEANKIKLFATT 127 Query: 142 TENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIA 201 TENP F +N AL SR ++ LK L++ I + + + + V + + Sbjct: 128 TENPFFVINPALRSRCQLLSLKPLTSSQISERIKTLINVEE--------VFEPQAFNLLI 179 Query: 202 ELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISA 261 NGD R +NTLE++ + + + + LL I E A + GD +DL SA Sbjct: 180 NKTNGDLRAVINTLEIIYLLYK-----EHKVDYVLLKRIMQESYALGSSDGDEIHDLKSA 234 Query: 262 LHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCF 321 HKS+RGS DAALY+ AR+I G D + RR ED+G A+P + Sbjct: 235 FHKSMRGSDCDAALYYLARLIIIG-DFEAIYRRVSVCVHEDIGLANPNLCLRVDQGINSC 293 Query: 322 TRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMK 381 +G E + +A ++ + + KSN+VY A++ A DA Y +P H+R+A Sbjct: 294 RFLGYPENQVILANLVLQICLSNKSNSVYLAYQKAFEDAANGKQYSIPNHVRDAHYASAI 353 Query: 382 EMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 ++G Y+Y HD N Y + Y P E+ +YY P N E K+ + Sbjct: 354 KLGVH-GYKYPHDFKNNYVNQQ-YLPRELTNKKYYVPQNNEQEFKLNQNQQKFK 405 >UniRef50_C1SKW4 AAA ATPase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKW4_9BACT Length = 426 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 140/423 (33%), Positives = 209/423 (49%), Gaps = 24/423 (5%) Query: 18 ARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANAD 77 +RP GQ+HL+ + +E G S++L GPPGTGKTTLAE+I ++ N Sbjct: 5 EELRPRAFDDIAGQKHLIGVDSVFRKMVEDGGFDSVVLVGPPGTGKTTLAEIIGKHLNMP 64 Query: 78 VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITF 137 + A T+G ++++ +E AR G+ ++FVDE+HRFNK+QQ L I+ G Sbjct: 65 YFSLHAATAGSGDLKQIMESARHA---GKTVLVFVDELHRFNKTQQVLLLNMIDSGLAKL 121 Query: 138 IGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETR 197 IGA+TENP L L SR+ V+ L+ L D++++ + Y D+V D+ Sbjct: 122 IGASTENPYHNLIQPLRSRSFVFRLERLEKPDLKELFEKVKLYFKERYKADDVVCTDDEF 181 Query: 198 RAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYD 257 + + +GD RR L+ LE+ A D VL + + +R+ D YD Sbjct: 182 DRLVKASDGDGRRFLSVLELSAVNGSFKDD---VLHLGVSKALEHTTDSRY--NADEHYD 236 Query: 258 LISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAA 317 ++SA+ KS+RG+ PDAA W R++ G +P + RR L ASED+GNA P +A Sbjct: 237 MLSAMIKSIRGTDPDAAALWCFRLLECGMEPEAIFRRLLISASEDIGNAFPXXXXXXXSA 296 Query: 318 WDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPT 377 + F VG EG+ +A I YLA PKSN Y A A +VP LR Sbjct: 297 YSAFQAVGRPEGDIILAHVITYLASCPKSNRSYKAMWAVKEYLEN-NTPNVPYPLRTE-- 353 Query: 378 KLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQ 437 G+ Y Y D + + E+ +Y P++ G E KI E+L L + Sbjct: 354 --------GKGYHYPFDH-GGFVVQDYSGTDEV----FYDPSDAGFEMKISERLKRLWGK 400 Query: 438 DQN 440 ++ Sbjct: 401 EKT 403 >UniRef50_Q2NJI8 ATPase, AAA family n=7 Tax=Mollicutes RepID=Q2NJI8_AYWBP Length = 414 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 123/425 (28%), Positives = 219/425 (51%), Gaps = 18/425 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLA-AGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA +RP + IGQ HL+ + R ++ + S+I +G PG GK++LA+V+A Sbjct: 4 KPLAFALRPSTITDIIGQSHLINDQNGIISRMLKNNYASSLIFYGVPGIGKSSLAQVLAN 63 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +A ++ + I++A ++ IL ++E+HR NK +QD L ++E+ Sbjct: 64 DLQIKYDIFNAAIDKKSKLEKIIQQA----LNFKKFILIIEEIHRMNKDRQDILLQYLEN 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G + TTENP F +N ++ SR + L+ ++TE++ L + + +K + + Sbjct: 120 GHLIMFACTTENPYFVINPSIRSRVNIIKLERITTEEMLTGLNKLIVNKKLP-----LNI 174 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 + I +L +GD R A+N LE+ + ++ + +++ +I+ + Sbjct: 175 LQDALLLICQLSSGDLRIAINMLELCLHLYPGEE-----ITKKIIKKISSSANLINFKDN 229 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D ++L SAL KS+RGS DAAL+++AR++ +G D + RR L A ED+G A+P + Sbjct: 230 DEHHNLKSALQKSIRGSDVDAALHYFARLLASG-DHEALIRRMLITAYEDIGLANPMIII 288 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 A D F ++G EG + AI+ + + KSN+ Y A A D + +++P HL Sbjct: 289 HVKTAIDAFRQIGLPEGRIPLGLAIIEMCLSEKSNSAYLASNKAYEDVLQGNVFNIPKHL 348 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT-NRGLEGKIGEKL 431 ++ ++G G +Y+Y H+ N Y + Y P EI + YY P + E KI + Sbjct: 349 QDTSYNSASKLGIGFDYKYPHNFPNNYVNQQ-YLPQEIKELIYYIPKLHSEYEKKINKIH 407 Query: 432 AWLAE 436 + Sbjct: 408 EKFKQ 412 >UniRef50_D1J7Q3 ATPase, AAA family n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Q3_MYCHP Length = 404 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 137/430 (31%), Positives = 210/430 (48%), Gaps = 31/430 (7%) Query: 16 LAARMRPENLAQYIG-QQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 LA +RP+ L +I Q+ K + IE S I +G PGTGKTT++ ++A Sbjct: 5 LANLIRPKILEDFICPQE----QKKLFQKIIENNDYRSFIFYGKPGTGKTTISYILANAL 60 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + E +A ++ + + + + N IL +DE+HR NK +QD LP++E+ Sbjct: 61 KVNYEYFNAA---IENKEDLVHKLKLN------KILIIDEIHRLNKDKQDILLPYLENDL 111 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 IT TTENP F+LN AL SR + + + +D+ L A + L Sbjct: 112 ITIYATTTENPYFKLNPALRSRCSIIEITKPTIQDLSSCLKNACLKTF------GVDLNK 165 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 + +A NGD R ALN L+++ + + + E + +I D GD Sbjct: 166 DIADYLALQANGDFRSALNNLDLIMLIFKDQE-----FSLEAIKKIIPSIQFSSDESGDN 220 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 YD +SA HKS+RGS DAALYW II +G D + RR L + EDVG A+P+ Sbjct: 221 HYDYLSAFHKSLRGSDIDAALYWGFIIIKSG-DFDGLFRRMLCASYEDVGMANPKLGSEV 279 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 ++A +CF R+G EG I QAI+ + +PKSN VY++ + ++VP+HL++ Sbjct: 280 LSAIECFERIGMPEGYLPITQAILNICLSPKSNTVYSSSTLIKSIIDSGNIFEVPIHLKD 339 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 A K ++ G Y+Y HD N Y + Y P E+ + +G E KI + Sbjct: 340 AHYKSAAKLKRGLNYKYPHDYKNNYIDQQ-YLPNELKDKIHIELNGQGYEQKIKQY---- 394 Query: 435 AEQDQNSPIK 444 + +N K Sbjct: 395 WDLIKNKGEK 404 >UniRef50_C2HPK6 Crossover junction endodeoxyribonuclease ATPase n=8 Tax=Lactobacillus RepID=C2HPK6_LACAC Length = 478 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 138/429 (32%), Positives = 213/429 (49%), Gaps = 19/429 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA MRP+ L + +GQ HLLA GKPL + I+ L S++LWGPPG GKTTLA V+++ Sbjct: 54 QPLADLMRPKTLGEMVGQNHLLAKGKPLYQIIKEHILLSLLLWGPPGCGKTTLAYVMSQT 113 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 E+ +A ++++ I++ + +L +DE+HR K QD LP++E+G Sbjct: 114 LRLPFEKFNASIQNKSQLQKLIQK-----HPDESFVLLLDEIHRLTKPIQDYLLPYLENG 168 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + +G TTENP + A+ SR +++ + EDIE VL +A E+ + LP Sbjct: 169 HVLLVGTTTENPIMSIQPAIRSRCQIFEFYPIKAEDIELVLIKAAEEHL------NFDLP 222 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + AIA NGD R +LN L+ + M + + + E A + FD Sbjct: 223 KKQAHAIANSGNGDVRVSLNILDTLNAMHPQN------ISMANIEEFARNQHFAFDKDAT 276 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD +SA S+ GS DAALY+ A I+ +G D V RR +A+ DVG AD + Sbjct: 277 KHYDYLSAFQDSIEGSDADAALYYLAVILKSG-DLESVVRRLKDLAALDVGLADSARVAQ 335 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 I + +G +A A + LA AP+S++ A+ A DA D+ +P +L+ Sbjct: 336 VITLANTALEIGLPRASTHLAMATILLAVAPRSDSAMQAYYQAAKDAEHPADHPMPKYLQ 395 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + K ++ E + D + A E Y P ++ YY P E K+ + Sbjct: 396 DYHYKGAGKLRGAGEMQNMFDLPHNIARQE-YLPKDLVGKHYYVPAQNKAEEKLYSQYQA 454 Query: 434 LAEQDQNSP 442 L + P Sbjct: 455 LYKYIYQKP 463 >UniRef50_A3ERK9 Probable ATPase, AAA family n=2 Tax=Leptospirillum sp. Group II RepID=A3ERK9_9BACT Length = 444 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 129/449 (28%), Positives = 222/449 (49%), Gaps = 23/449 (5%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 + F + +PL++ + P+ +++GQ HL+ L R I SM++ GPPG GK Sbjct: 1 MKSLFEPASQKPLSSLLFPDRPEEFLGQPHLMGERGILRRLIAVRSFRSMVIHGPPGCGK 60 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ 123 + ++ + E + A S E+++AI+R R +G+ +L ++E+ RF ++QQ Sbjct: 61 SAFVHLLQKVLPFHFEVVRAGESSGGELKKAIDRGVSYRQSGQDCLLVIEEIDRFTRTQQ 120 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIE---QVLTQAMED 180 D +P +E G + +G + +NP L L SR ++ + LS ED+ + Q +E Sbjct: 121 DVLVPALERGDLLLLGLSFDNPLRALLPPLASRLLLFSFQPLSPEDLLTLLERGRQFLEK 180 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLK---PELL 237 + R + + E + GD R+ L E + ++ D +R ++ PE+ Sbjct: 181 RDRS----PVSISPEAASVLVRRSGGDGRKLLLLFEALV-ISRKDHGERREVQIGLPEVH 235 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 AG +D ++ YDLISA KS+R PD+A+++ AR+I +G DP++++RR + Sbjct: 236 GMEAGSGGIFYDR--EQHYDLISAFIKSIRNHDPDSAIHYLARMIESGEDPVFISRRLVI 293 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 +ASEDVG A+P A+ VA++ + +G EG +A+ +YLA +PKSN+ Y A A+ Sbjct: 294 LASEDVGLANPHALTVAVSCLEAVRSIGMPEGRIVLAETSLYLALSPKSNSAYRAIDRAI 353 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQE----YRYAHDEANAYAAGEVYFPPEIAQT 413 + RE VP RN + + G + Y Y + N + + P Sbjct: 354 REVREGFLPPVPFFFRNVSPSSVIQSGAFPDKRDPYLYPPEMPNG-VSPQSGLPE---GH 409 Query: 414 RYYFPTNR--GLEGKIGEKLAWLAEQDQN 440 Y P R G E ++ ++L Q N Sbjct: 410 TVYSPPERLVGEESEMVKRLERWRRQKGN 438 >UniRef50_Q043K3 Helicase subunit of the Holliday junction resolvase related ATPase n=11 Tax=Lactobacillus RepID=Q043K3_LACGA Length = 429 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 130/422 (30%), Positives = 215/422 (50%), Gaps = 19/422 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +RP++L+Q++GQ+ L+ G+PL + I+ S++LWGPPGTGKT+LA++IAR Sbjct: 8 KPLADLIRPKDLSQFVGQKDLIEEGRPLYQIIKKHVPISLLLWGPPGTGKTSLAQIIARE 67 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + + +A ++ + I + +L +DE+HR + QD LP++E+G Sbjct: 68 FDYPLATFNASIDNKAKLTQIINTYPY-----QSFVLLIDEIHRMTTTLQDFLLPYLENG 122 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATTENP + A+ SR +++ K+LS EDIEQVL +A+++ + +D + Sbjct: 123 RILLIGATTENPIMSIVPAVRSRCQIFEFKALSDEDIEQVLIRALKE---VFHFKDENID 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + + IA +GD R ALN LE + + E L E + + + +D K Sbjct: 180 RKAVKIIAISADGDLRVALNLLETIHAVNE-------DLSVEEVKQFVKGQHFAYDRKAT 232 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP-RAMQ 312 + YD ++A S+ GS DAALY+ A ++ G D V RR I +G A+P +A Q Sbjct: 233 KHYDYLAAYSDSIAGSDTDAALYYLAVLLKNG-DLASVVRRLREIPYTYIGLANPEQATQ 291 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + IAA ++G + + + A + + +PKS ++ D + +P L Sbjct: 292 IVIAANQA-EKIGMPKAKYPLMFATMLMCLSPKSGVFDEIWQKLDEDTDHPSKHPMPRGL 350 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 R+ K +E+ G + A + Y P + RYYF + E K ++ Sbjct: 351 RDMHYKHSEEITGGGLIDNPFAQPFQIAK-QNYMPKGLEGKRYYFAKDNASEKKFEQQYL 409 Query: 433 WL 434 L Sbjct: 410 KL 411 >UniRef50_A5IXK5 ATPase, AAA family n=2 Tax=Mycoplasma RepID=A5IXK5_MYCAP Length = 404 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 124/425 (29%), Positives = 195/425 (45%), Gaps = 25/425 (5%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + LA +RP+ L IGQ+ ++ + L + S I +G GTGKT+ A +A Sbjct: 1 MKNLANELRPKTLDDIIGQKSVV---ELLKKVARDKIYSSFIFFGESGTGKTSAAVALAN 57 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +A + E+ + + +L +DE+HR NK +QD L ++E Sbjct: 58 DLGLKYDYFNASVNSKAELIKML---------ADNDVLIIDEIHRLNKDKQDILLSYLEF 108 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 I TTENP F +N AL SR ++ LS +++ + + ++ Y + Sbjct: 109 DKIIIYATTTENPYFRVNPALRSRMQILQFTKLSEQEMFEGIKHNLKKYFPDY-----QM 163 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 + T + +L NGD R LN L+++ M++ + + + + + S D Sbjct: 164 DESTIKVFVKLSNGDYRSCLNNLQILTLMSK-----NKQISLDDIKKFVPNISFYSDENS 218 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 Y+ +SA HKS+RGS DAALY+ A I+ +G D + RR +A + EDVG ADP Sbjct: 219 SAHYNNLSAFHKSLRGSDVDAALYYGAIIVKSG-DLQGLFRRLIACSYEDVGLADPNLQI 277 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 A DC +G E I AI+ +A A KSN+VY A + YDVP L Sbjct: 278 RVKNAIDCAELLGLPEARLPIFYAIISVALASKSNSVYEAISNVEGYINQGNIYDVPKFL 337 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 R+ ++G Y+Y HD N E Y P E +++FP KI E Sbjct: 338 RDGHYASAVKLGDSIGYKYPHDFPNHIVKQE-YLPKEAKGNQFFFPKETDS-KKITEYYK 395 Query: 433 WLAEQ 437 ++ + Sbjct: 396 FIKQL 400 >UniRef50_UPI000192678D PREDICTED: similar to Werner helicase interacting protein n=1 Tax=Hydra magnipapillata RepID=UPI000192678D Length = 342 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 168/374 (44%), Positives = 229/374 (61%), Gaps = 35/374 (9%) Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNR--NAGRRTILFVDEVHRFNKSQQDAFL 127 +A +A ISAV G+KEIREA+++A R RRTI+FVDEVHRFNKSQQ Sbjct: 1 MADAFDAQFITISAVLGGIKEIREAVDQALNARDGLEQRRTIIFVDEVHRFNKSQQ---- 56 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 +NSALLSRA VY+L+ L + +++++ +A + Sbjct: 57 ---------------------VNSALLSRAAVYVLQPLDADSLKKIVLKAQTEYALP--- 92 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + + +GDARR LNTLE +A A + + + L ++ GER R Sbjct: 93 ---AIESIAIDRLIAYADGDARRLLNTLETLAIAARQEQA--PEITDAWLLKVLGERMRR 147 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D G++FYD ISALHKSVRGS P+A+LYW+ R++ G DP Y+ARR + +A+ED+G AD Sbjct: 148 YDKGGEQFYDTISALHKSVRGSDPNASLYWFTRMLDGGADPRYMARRFIRMAAEDIGLAD 207 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 PRA+++A+ A D + R+G EGE A+A+ +VYLA APKSNAVY AF A A ++ Sbjct: 208 PRALRLALDAADVYERLGSPEGELALAECVVYLAVAPKSNAVYKAFNEAKAFVKKDGTRP 267 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP+HLRNAPTKLMKE+ YG+ YRYAHDE +AAGE Y P + T +Y P RGLE +I Sbjct: 268 VPMHLRNAPTKLMKELDYGKGYRYAHDEEGGFAAGERYLPDGMPDTDFYRPVERGLEIRI 327 Query: 428 GEKLAWLAEQDQNS 441 EKL L +++Q Sbjct: 328 AEKLRDLKDRNQKK 341 >UniRef50_C5K6M1 Werner helicase interacting protein, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K6M1_9ALVE Length = 622 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 169/430 (39%), Positives = 233/430 (54%), Gaps = 44/430 (10%) Query: 15 PLAARMRPENLAQYI---------GQQHLLAAGKPLPRAIE--------------AGHLH 51 PLA R RP + A + G + + + R I+ + Sbjct: 111 PLAQRARPTSSADLVYETDSNISEGPGNAIGGVSTVMRIIKYYEALSQSAATISHHPTVP 170 Query: 52 SMILWGPPGTGKTTLAEVIARYANA-----DVERISAVTSGVKEIREAIERARQN--RNA 104 SMI WGPPG GKTTLA+++ R ++SAV +GV ++ I +A + Sbjct: 171 SMIFWGPPGCGKTTLAQLLCRSLTQSGLPWRHTKLSAVNAGVNDVGLEIPKAESMEGKVT 230 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKS 164 T+LF+DE+HRFNK+QQDA LPH+E GT+T IGATTENPSF+ N AL+SR +V S Sbjct: 231 ISGTLLFLDEIHRFNKAQQDALLPHVESGTLTLIGATTENPSFQCNRALVSRCQVIKFSS 290 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L+++ I ++L +A+ + + R +AE GD R +LN LE+ D+A + Sbjct: 291 LTSDSIGRILRRALTSYYPQVAVDES--TGDLLRILAEFGMGDVRASLNALELACDLAMM 348 Query: 225 D----DSGKRVLKPELLTEIAGERS------ARFDNKGDRFYDLISALHKSVRGSAPDAA 274 ++ L+ E + E S +D GD YDL SAL KS+RGS DAA Sbjct: 349 GPRCGEAASSGLRREHIEEAMATSSSGRHRLLGYDKNGDIHYDLASALQKSIRGSDKDAA 408 Query: 275 LYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA 334 YW R++ G P YV+RR + IASEDVG ADP+A+Q+A AA G E A+ Sbjct: 409 AYWTTRMLLGGEPPEYVSRRLMRIASEDVGLADPQALQLAAAAHTVTMSTGMPECSTALL 468 Query: 335 QAIVYLACAPKSNAVYTAFKAALADA-RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAH 393 + +YL APKSNAVY A+K A + D +VP+HLRNAPT LMKE+GYG++Y Y Sbjct: 469 EVALYLCDAPKSNAVYVAYKNASKAIEKATTDSEVPLHLRNAPTGLMKELGYGRDYIYT- 527 Query: 394 DEANAYAAGE 403 +E GE Sbjct: 528 NEPRPTQPGE 537 >UniRef50_B0EGY1 ATPase WRNIP1, putative n=2 Tax=Entamoeba RepID=B0EGY1_ENTDI Length = 482 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 142/450 (31%), Positives = 233/450 (51%), Gaps = 68/450 (15%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 D ++ PLA R RP+ L IGQ+ + G P I L S IL+GPPG+GKTT+A + Sbjct: 25 DISYIPLAERQRPKRLEDIIGQESAIGIGTPFNSMILNDSLQSTILFGPPGSGKTTIARI 84 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQDAFLP 128 I +N+ +IS+VT+ +E++ IE+A++ + ++ TILFVDE+H NK QQD FLP Sbjct: 85 IKNMSNSFFVQISSVTTSKEELKNVIEQAKERKKREKKDTILFVDEIHTLNKLQQDIFLP 144 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 IE+G+I IGATTENPSF+LN+AL+SR + +LK L E I +++ +A++++ Y Sbjct: 145 AIENGSIILIGATTENPSFQLNNALMSRCNLVILKRLENESINKIIKKAIKEE---YQNN 201 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADM------------AEVDDSGKRVL---- 232 ++ + I++ +GDAR LN LE + + + ++S + Sbjct: 202 KFIIDEAGINIISKYADGDARNGLNCLEFIFNYFNHLSEEELKEIIKSNESENNTIIIDE 261 Query: 233 -------------------------------KPELLTEIAGERSARFDNKGDRFYDLISA 261 E++++ +++ ++D G+ Y+ ISA Sbjct: 262 NDCTISKKNELENTELSYQTIEEPEVIHITLTSEIISKFLQKQNFQYDKSGEDHYNTISA 321 Query: 262 LHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCF 321 HKS+RG +AA+YW R+I +G +P YVARR + A+ED+G AD AM VA+ + Sbjct: 322 FHKSMRGGDENAAVYWLGRMIFSGENPKYVARRMIRFATEDIGLADTNAMVVAMNTFQAV 381 Query: 322 TRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMK 381 +G + + +A+ +YL A KS A+Y A +E+P+Y VP+ + + Sbjct: 382 EILGYPDCKTVLAECCLYLTRAKKSTAIYKATLTLKKMVKEQPNYIVPIRVSTSS----- 436 Query: 382 EMGYGQEYRYAHDEANAYAAGEVYFPPEIA 411 + + + P ++A Sbjct: 437 ------------EHPTETNQIQTFLPDKLA 454 >UniRef50_A2QW62 Function: WHIP of M. musculus is involved in aging control n=3 Tax=Aspergillus RepID=A2QW62_ASPNC Length = 513 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 135/425 (31%), Positives = 223/425 (52%), Gaps = 21/425 (4%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 + L+ + PLA ++RP +GQ+ L+ L R IE L ++ILWGPPG+ Sbjct: 92 AGLATEQLHLRHAPLAEQVRPRCFDDIVGQKSLIGPNGTLRRLIEQDELPNLILWGPPGS 151 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNK 120 GKTT+A +I V IS++T+ E R+ + +A + GR I+F DE+HR + Sbjct: 152 GKTTIARIIGPMMRRKVYEISSLTTITTEYRDIVTKA---THDGRNKSIIFCDEIHRLTR 208 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 QQD FL + IT IGATTENPS ++ L+ + RV+ + +T D+ +L +++ Sbjct: 209 PQQDIFLDAMRRNKITLIGATTENPSLNIHHTLVYKCRVFTVAKPTTTDLATILRRSL-- 266 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 ++ + +L DE + IA +GD+R ALN LE+ D+ + K LK Sbjct: 267 ISQTHLKSSPLLDDEFLQYIAGFADGDSRTALNVLEIATDLCRRPNMTKEKLK------Y 320 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 + +S +D GD+ YD ISALHKS+RGS PDAALY+ R++ +G +PL++ARR + S Sbjct: 321 SLTKSLLYDRSGDQHYDTISALHKSIRGSDPDAALYYLVRMLQSGENPLFIARRLIVATS 380 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 ED+G A+ A + + ++G + + A+AQ ++ + + KS Y ALA Sbjct: 381 EDIGLANNVLQTYATSIYLMIEKLGINDAQSALAQLVITMCLSKKSTRSYRGLNNALAAV 440 Query: 361 RER--PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA---YAAGEVYFPPEIAQTRY 415 +E D +P H+ + +L++E + D + + + + P + ++ Sbjct: 441 KEPGMGDLPIPFHILDRRPELLRE----ADLVVTTDSQQSQKRLPSTQGFLPHALEGRKF 496 Query: 416 YFPTN 420 T+ Sbjct: 497 LEDTD 501 >UniRef50_Q7NAV9 Predicted ATP/GTPase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAV9_MYCGA Length = 413 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 117/420 (27%), Positives = 213/420 (50%), Gaps = 20/420 (4%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 +PE++ IGQ+HLL L R I+ +S+++ G PG GKTTL ++ N Sbjct: 12 YQPESVEDIIGQKHLLHEYGILRRMIDLRKPYSLLVTGEPGIGKTTLCNILISEMNLPSF 71 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 ++ + ++E+++ I +A++ + ++ +DE+HR ++ +QD + ++ + G Sbjct: 72 SFNSASDSLQELKQFISKAKEL----NQCVIIIDEIHRLHRDKQDLLIKGLDAKSFILFG 127 Query: 140 ATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRA 199 TTENP F +N A+ SR L + ++ ++ + + ++ K + + D+ Sbjct: 128 ITTENPYFTINPAIRSRVHTIELVNPTSIELFEGYKKIVQQKNI------VTISDDILYK 181 Query: 200 IAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLI 259 IA +VNGD R+ +N +E++ D K V E + + + + + GD F+DL Sbjct: 182 IANMVNGDLRKGINIIELL------DIYYKNVEITEEILKNVIDNNVTLASYGDTFHDLK 235 Query: 260 SALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 SAL KS+RGS PDAA+Y+ A++I A D + ++RR +A A ED+G A+P A Sbjct: 236 SALQKSIRGSDPDAAVYYLAQLI-ATKDLITISRRLIACAYEDIGLANPDLCSRVYLATQ 294 Query: 320 CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKL 379 G E + ++ ++ +A + KS++ Y A AL + +VP H++ P L Sbjct: 295 AAKEAGFPEANQILSSIVIEMALSEKSSSAYEAISDALVEVANGNIQNVPWHIKKNPINL 354 Query: 380 MKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY-FPTNRGLEGKIGE-KLAWLAEQ 437 + Q+Y+ H+ N + + + Y P EI +YY + E I + L W ++ Sbjct: 355 SSTLNNMQKYKNPHNYDNHWVSQD-YLPREIRDKKYYIKQAHNYNEKLINDYWLKWRKDK 413 >UniRef50_Q8EWR1 Predicted ATPase n=1 Tax=Mycoplasma penetrans RepID=Q8EWR1_MYCPE Length = 409 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 106/417 (25%), Positives = 197/417 (47%), Gaps = 22/417 (5%) Query: 24 NLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISA 83 + + I + + + IE L S++ +G PG GK+ + I + N + ++ Sbjct: 13 SFDEMICKDVIFPKDSIIINMIENNDLFSILFFGNPGVGKSASIQFILKKLNKNFYYFNS 72 Query: 84 VTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTE 143 T+ ++ E +E A + I+ ++E+HR NK +QD L ++E I + TTE Sbjct: 73 TTNNKNDLLEILELA----TEDNKPIIIIEEIHRLNKDKQDLLLMYLEKDMIIVLATTTE 128 Query: 144 NPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAEL 203 NP F++N A+ SR +Y ++++++ +++ + + +E+K + L ++ AI E+ Sbjct: 129 NPFFKVNPAIRSRLLLYRIENINSAVLKEEVIKYLENKK-------VKLSNKVVEAIVEI 181 Query: 204 VNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALH 263 D R+ L+++ + L E+ ++ D + YDL+SA H Sbjct: 182 SKSDFRQIFFYLKIVLKYYQNKSDDIV------LKELGKITNSLIDRRATNHYDLLSAFH 235 Query: 264 KSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTR 323 KS+RGS P+AA+Y+ A+++ +G D + V RR A+ ED+G A+ AA + Sbjct: 236 KSIRGSDPNAAVYYLAQLLESG-DLISVYRRLYAVVYEDIGLANSGLGPKVNAAVNASEA 294 Query: 324 VGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEM 383 +G E ++Q + L +PKSN+ A A+ + P HLR+A ++ Sbjct: 295 LGLPEARIPLSQITIELCLSPKSNSAIMAIDEAIQSVNKEALSP-PNHLRDAHYASAVKL 353 Query: 384 GYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR-GLEGKIGEKLAWLAEQDQ 439 + Y+Y HD +Y E Y P E+ +Y P E K + + ++ Sbjct: 354 NV-KGYKYPHDYNFSYVEQE-YLPKELKNKEFYKPNKYSQNENKFVDYWNKIKSNNK 408 >UniRef50_A8BYS0 ATPase, AAA family n=2 Tax=Giardia intestinalis RepID=A8BYS0_GIALA Length = 509 Score = 349 bits (897), Expect = 8e-95, Method: Composition-based stats. Identities = 124/415 (29%), Positives = 194/415 (46%), Gaps = 25/415 (6%) Query: 16 LAARMRPENLAQYIGQQHLLA-AGKPLPRAIEAGH----LHSMILWGPPGTGKTTLAEVI 70 L+ R+RP + + IG H+L+ + R E L S+I+ GPPGTGKT+ A + Sbjct: 97 LSMRLRPTTIDEIIGNHHILSLTDGVISRIYEQSRTTHVLQSIIITGPPGTGKTSFARLY 156 Query: 71 ARYANA-----DVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDA 125 A+ + + + A + + ++ E I R N R LFVDE HR K+QQD Sbjct: 157 AKSFDPSYRLIEFKPGQATVAELNKVTERIYTDRANSLTSARVCLFVDEAHRCTKAQQDR 216 Query: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME---DKT 182 L +E+G +T I ATT +P + L SR + +L+++DI Q+ + + DK Sbjct: 217 LLSAVEEGVLTLILATTSSPYTAIIEGLRSRCFLLSFNALTSKDILQICVRGLNSMLDKL 276 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 DI + I GD R+AL+ LE+ + + G +L L G Sbjct: 277 DTSVPLDICVEPSAIAKIVVAARGDGRKALSLLELSVTGGRITEQGVALL---LSGGAHG 333 Query: 243 ERSARFDNKGDRF-YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 + ++ Y+ +S + K++R S P A+++ A ++ DPLY+ARR + ASE Sbjct: 334 DAIMHCTLNQEQVKYEGVSGMIKAIRASDPQGAIFYLAFLLRTAVDPLYIARRLIISASE 393 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 D+G AD +A+ VA++ + +G E A+AQ +YL+ APKSN+ TA A A Sbjct: 394 DIGLADSQALSVAVSCYRATEVIGLPEAHYALAQTALYLSLAPKSNSAGTALNNAFAAID 453 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 D P + K G Y Y H+ Y E P + +Y Sbjct: 454 SATPTDC------LPPEGYKSASAGANYVYPHNY-GGYVL-ESTLPESLRGQIFY 500 >UniRef50_Q6KHC7 ATPase n=3 Tax=Mycoplasma RepID=Q6KHC7_MYCMO Length = 372 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 118/392 (30%), Positives = 183/392 (46%), Gaps = 22/392 (5%) Query: 50 LHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTI 109 + S I +G G GKTT A VIA+ E + +E +E+ N I Sbjct: 1 MSSFIFYGESGIGKTTAATVIAKE---KQESYDVFNPTIHSKKELLEKLAIN------KI 51 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTED 169 L +DE+HR NK +Q+ L ++ED I TTENP F++ +L SR ++ LS + Sbjct: 52 LIIDELHRLNKDKQEILLSYLEDDKIILYATTTENPYFKIIPSLRSRLKILRFNKLSETE 111 Query: 170 IEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK 229 I Q L +E I + D+ +I + GD R A+N L+++ + + Sbjct: 112 IFQGLKNIIEKYKLK-----IKINDDLLLSIVKFSAGDFRNAINNLDLIETIYPNTN--- 163 Query: 230 RVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPL 289 + E + +I + D D+ YD +SA HKS+RGS PDAALY+ ++ GD Sbjct: 164 --VDFESIKKIFPSMNFYTDKDADKHYDTLSAFHKSLRGSDPDAALYY-GMLLAKAGDID 220 Query: 290 YVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV 349 + RR + +A ED+ A+P A AA + RVG E +A+ I+ +A +PKSN+ Sbjct: 221 ALLRRLIMVAYEDIALANPNASIKVDAAINAIERVGFPEANTILAKIIIEIALSPKSNST 280 Query: 350 YTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPE 409 Y + L YD+P HL++ K + + Y Y HD N Y + Y P E Sbjct: 281 YVSMNKILDKINNGNIYDIPDHLKDTHYKNSAKFNRPK-YLYPHDFENNYV-NQNYLPIE 338 Query: 410 IAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441 + + ++ N E KI + +N Sbjct: 339 LEKNHFFEFANNQNEQKIKSYWEKIKIASRNK 370 >UniRef50_Q5KCD2 Helicase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KCD2_CRYNE Length = 397 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 132/345 (38%), Positives = 187/345 (54%), Gaps = 42/345 (12%) Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLK 163 GRRT+L +DE+HRFN++QQD LP++E G I IGATTENPSF++N ALLSR +V+ L Sbjct: 2 TGRRTVLMIDEIHRFNRAQQDLLLPYVEKGWIQLIGATTENPSFKVNGALLSRCQVFTLH 61 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + S E ++ +L A++ T LP +A++ +GDAR+ALN LE+ + Sbjct: 62 AHSPESLQIILRNAVQ--TISESEPIPYLPSGLIPFLADVADGDARQALNGLELALRTCQ 119 Query: 224 VDDSGKRVLKPELLTEIAGERSAR------------------------------------ 247 D K + + +GE+ + Sbjct: 120 TMDETASAEKAQRVNSASGEKMEKEGQKDEFDAAVEEAEEDYQKKKRDEEIMDAVRRGLQ 179 Query: 248 --FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 ++ G+ YD+ISALHK +RGS AA+YW AR+IT G DPLY+ARR + +ASEDVG Sbjct: 180 KGYNRTGEERYDMISALHKCLRGSDGSAAMYWLARMITGGEDPLYIARRLIVVASEDVGL 239 Query: 306 ADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD 365 AD A+ +A+A + +G E +A + YLA APKS Y A+ AA A P Sbjct: 240 ADNHALPLAMATYQACQTIGLPECRINLAHCVAYLAEAPKSTRSYKAYAAAEQLATMPPL 299 Query: 366 YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI 410 VP+ +RNAPT+LMK++GYG+EY Y D + Y P + Sbjct: 300 PGVPLQIRNAPTQLMKKLGYGKEYAYNPDY--GHPVHNDYLPESL 342 >UniRef50_Q4SLJ4 Chromosome 15 SCAF14556, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SLJ4_TETNG Length = 499 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 119/409 (29%), Positives = 180/409 (44%), Gaps = 74/409 (18%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA-- 71 +PLA +RP+ L +Y GQ ++ L +E+ + S ILWGPPG GKTTLA +IA Sbjct: 159 KPLADILRPDTLEEYFGQNKVIGQQTLLRSLLESEEIPSFILWGPPGCGKTTLAHIIAGK 218 Query: 72 --RYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 R A +SA ++ V ++RE I++A+ +R Sbjct: 219 CKRKGTARFVTLSATSASVSDVREVIKQAQNELRLCKRK--------------------- 257 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 T+ FI ++ + + G ++ Sbjct: 258 ----TVLFI------------------DEIHRFNKSQQDTFLPHVECG-TVILIGATTEN 294 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 + A + R A S + ++K E + E +D Sbjct: 295 PSFQAQVS---ASKADTSGRSA---------------SKEILVKEEHIKEGLQRSHILYD 336 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 G+ Y+ ISALHKS+RGS +A+LYW R++ G DP+YVARR + AS ADP Sbjct: 337 KAGEEHYNCISALHKSMRGSDENASLYWLGRMLEGGEDPIYVARRMVRFAS----LADPA 392 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE--RPDYD 367 A+ A++A+ +G E E +AQ +YLA APKS VY A+ A R P Sbjct: 393 ALSQAVSAFQACHFIGMPECEVILAQCAIYLARAPKSIEVYQAYANVKACLRNHKGPLPS 452 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 VP+HLRNAPT+LMK++GY + Y+Y + + Y P E+ ++ Sbjct: 453 VPLHLRNAPTRLMKDLGYSKGYKYNPSFSGP--VEQEYLPQELQGVNFF 499 >UniRef50_B7PTW3 Werner helicase interacting protein, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7PTW3_IXOSC Length = 400 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 125/420 (29%), Positives = 195/420 (46%), Gaps = 40/420 (9%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA MRP L ++GQ L L + I + + SMILWGPPG GKTTLA +I++ Sbjct: 1 PLAELMRPSQLEAFVGQDGTLGEKSMLRKLIASNSVPSMILWGPPGCGKTTLAHIISQKC 60 Query: 75 N----ADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 A +SA +SGVK++++ +ERAR R R+T+LF+DE+HRFNK QQ L + Sbjct: 61 KESSEAHFVTLSATSSGVKDVKDTLERARNDQRMFKRKTVLFIDEIHRFNKLQQLVGLCN 120 Query: 130 IEDGTITFIGATTENP-SFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG-- 186 ++ + T + P L A+ R + L ++ + Q+ + + + Sbjct: 121 RASPIVSLL--TNDRPGVLTLKQAM--RRKSGLAQAHAGSVTNQLDSLHAFYSCKSFSPV 176 Query: 187 ---------GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELL 237 + +++ +E + + +GDAR ALN L+ + A L + Sbjct: 177 QYCFPVHLFSRPVLMEEEALDYLTGMCDGDARTALNALQTAVE-AHRSSGQDGCLTKAHV 235 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E + +D GD+ Y+ ISA KS+RGS +AALY+ A ++T G DP ++ARR + Sbjct: 236 KEGLHKTHFLYDRAGDQHYNTISAFIKSMRGSDQNAALYYLACMLTGGEDPRFIARRLVI 295 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASED+G R + W + + +A Y A APKS Y A+ A Sbjct: 296 FASEDIGTHSLRVTNLL--CWFHVLSL-----QIILAHCTTYCARAPKSRESYNAYAHAE 348 Query: 358 ADARER-PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 +E+ VP+HLRN T G H + + P + ++ Sbjct: 349 KAVQEQERLPPVPLHLRNN-TSYTSHSGQ------PH---RGQSKELPFLPEPLKHLNFF 398 >UniRef50_C7M3A0 AAA ATPase central domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M3A0_ACIFD Length = 370 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 145/371 (39%), Positives = 200/371 (53%), Gaps = 17/371 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +RP +LA+ +GQ H A + L A ++I+ GPPG GKTT+A ++AR Sbjct: 12 RPLAEELRPTSLAEVLGQDHARARLEALATA---PRTIAVIMTGPPGVGKTTIASLLARA 68 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + + A +GV+++REA A + G T+ FVDEVHRF ++Q D L IE G Sbjct: 69 RGEHLVELHATDTGVRDLREARAEAARRARHGDGTLWFVDEVHRFGRTQLDLLLAPIERG 128 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I+FIGATTENP+ L+ ALLSR V L++L + V +A+ ++ Sbjct: 129 EISFIGATTENPAVTLSPALLSRCDVVRLRALEPPVLRAVAERALAH-------LGLIAD 181 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D + GDAR L LE A A +R L ELL I+ + D+ Sbjct: 182 DAAIAWLVAAARGDARALLRILERAAPAAA-----QRPLTVELLERISEIAALGLDDST- 235 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y+L SAL KS+R S P A+ W A + AG DP ++ARR + ASEDVG ADP A+ + Sbjct: 236 -HYELASALIKSMRQSRPTEAIRWLAAALAAGEDPRFIARRLVIFASEDVGLADPEALVL 294 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A AA D R+G E +A ++YLA APKS Y A +AALA+A +P VP LR Sbjct: 295 AAAAADTVERIGMPEARITLAHVVLYLARAPKSREAYDAIEAALAEASTKPRPIVPEELR 354 Query: 374 NAPTKLMKEMG 384 T + + G Sbjct: 355 GQITGIERRRG 365 >UniRef50_C4LVU1 AAA family ATPase, putative n=2 Tax=Entamoeba RepID=C4LVU1_ENTHI Length = 429 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 122/375 (32%), Positives = 199/375 (53%), Gaps = 24/375 (6%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQ----QHLLAAGKPLPRAIEAGHLHSMILWGP 58 NL +FS +TF LA R RP+ + +GQ ++ L G + SMI +GP Sbjct: 17 NLKTEFS-STFGTLAERRRPQKIEDVVGQLKVRDDIIHQVTVL------GRVDSMIFFGP 69 Query: 59 PGTGKTTLAEVIARYANADVERISAV---TSGVKEIREAIERARQNRNAGRRTILFVDEV 115 PG GKTT ++I R+ + T+ VK+ ++ I + + +TI+F+DE+ Sbjct: 70 PGCGKTTFCKLIKRHFEKSFIELDGNSINTNIVKDFKKGIIK-KNKETTHSQTIIFIDEI 128 Query: 116 HRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLT 175 H + + Q+ + I++ TI IG TT+ PSF L+ LL RV +L+ L+ +++++ Sbjct: 129 HCISSTVQNFLIDLIKEKTICLIGTTTQVPSFCLSKELLLFMRVIVLERLNEVSVKEIIK 188 Query: 176 QAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE 235 +A+ + Y ++ DE I E +GD R ALN LE + AE++ + +K Sbjct: 189 RAINAEYSKY-----IVSDEVIDKIVESSDGDGRMALNNLEKLIQCAELEKVNEVSIK-- 241 Query: 236 LLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC 295 + E+ G+R+ +D +GD Y+LISA KS+RGS DA++YW R+I +G Y+ RR Sbjct: 242 FVHEVIGKRALNYDKRGDEHYNLISAFQKSIRGSDEDASVYWLERMILSGEKLSYITRRM 301 Query: 296 LAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKA 355 L IASED+G AD A V +G + + + + ++YLA A KSN + Sbjct: 302 LRIASEDIGMADTSATTVISNVAYAVDVLGYPDCKCCLLEGVLYLARARKSN--FLDVLD 359 Query: 356 ALADARERPDYDVPV 370 +L + ++ Y VP+ Sbjct: 360 SLGRSLKKQQYSVPL 374 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 76/344 (22%), Positives = 142/344 (41%), Gaps = 65/344 (18%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 +N+ L + RP+ IGQ H+ L +I+ + H+ + GP GTGKT+ A+ Sbjct: 2 NNSNFVLYRKYRPQGFDNLIGQNHV---KNTLENSIKHNKVAHAYLFTGPRGTGKTSAAK 58 Query: 69 VIARYANAD---------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 + A+ N +E +A +GV +IR+ E+ G++ Sbjct: 59 IFAKLLNCQSPIDYNPCGECVCCQDSNTDIIEMDAASNNGVDDIRDLREKVNYAPAFGKK 118 Query: 108 TILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DEVH + + +A L +E+ I FI ATTE ++ + +LSR + Y + + Sbjct: 119 KVYIIDEVHMLSTAAFNALLKTLEEPPAHIVFILATTE--PHKIPATILSRCQRYDFRRI 176 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 S +DI + +E + + + ++ R I+++ G R AL+ L+ E Sbjct: 177 SQDDIVHRMKTIVE-------AESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVEGK 229 Query: 226 DSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAG 285 + + + EI G R I L + + S + AL + +G Sbjct: 230 ------VTLQDIIEITGAVDTRK----------IGTLIQYINQSNIEGALEHFNTCFESG 273 Query: 286 GDPLYVA-------------RRCLAIASEDVGNADPRAMQVAIA 316 +P + R+ A+ G+ DP+ ++A + Sbjct: 274 QEPHFFLEEMMIYLRDILVNRKLGEKATLKKGHNDPQFYEIANS 317 >UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S3_COPPD Length = 522 Score = 290 bits (744), Expect = 6e-77, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 57/337 (16%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L + RP+ + +GQ H+ + L +A++ + H+ + GP G+GKT+ A + A+ Sbjct: 2 ALYRKYRPQTFEEVVGQSHVT---EILTKALDNQKISHAYLFAGPKGSGKTSCARIFAKG 58 Query: 74 ANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRT 108 N + +E +A GV EIRE ER + R Sbjct: 59 LNCETGITSKPCNECESCKLINEGHSLDVIEIDAASNRGVDEIRELRERVKYRPAQSRYK 118 Query: 109 ILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DE H + +A L +E+ + FI ATT+ ++ +LSR + + K L+ Sbjct: 119 VYIIDEAHMLTREAFNALLKTLEEPPEYVVFILATTD--PQKIPPTVLSRCQRFRFKKLT 176 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 ++++ Q+L + + E IAE+ +G R ALN LE ++ + D Sbjct: 177 SDEVFQILENVCK-------SEGFSYQREALELIAEVSDGAVRDALNLLEQISVV----D 225 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 GK +K E D F D+ D A+ A ++ +G Sbjct: 226 EGKVSIKTARFLLNVVEDEVILDLLKTAFADM-------------DEAVERLAELMESGV 272 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTR 323 +P+ + R ++ V P VA+ + Sbjct: 273 EPMELFRTMKSLVRRSVFRNKPWPRDVALEMFRVLES 309 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 287 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 75/311 (24%), Positives = 126/311 (40%), Gaps = 56/311 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ +GQ+H+ + L AI +GH+ H+ + GP GTGKT+ A+++A Sbjct: 3 YIALYRKWRPQTFKDLVGQEHI---SRTLANAITSGHIGHAYLFAGPRGTGKTSTAKILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + E +A G+ EIR+ E + GR Sbjct: 60 KALNCEHGPTPEPCGQCEQCRKIADGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVDGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +A L +E+ + FI ATTE + ++ + SR + Y K Sbjct: 120 YKVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTE--AHKVPPTIQSRCQRYDFKR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++ E+IE L + + DE IA +G R AL+ L+ A +AE Sbjct: 178 ITVEEIESRLRYITAEMK-------MEAEDEALAMIAIQADGGMRDALSILDQCAALAEG 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + E + +I G +D I + K++ AL A ++ Sbjct: 231 ------TITAERVRQILGLVG----------HDWIYKMTKALAARNVQEALQILAELLRD 274 Query: 285 GGDPLYVARRC 295 G D + Sbjct: 275 GKDLKQILSEL 285 >UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus RepID=A8W2Q1_9BACI Length = 600 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 78/356 (21%), Positives = 139/356 (39%), Gaps = 70/356 (19%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L RP+ L +GQ+H+ + L A+ L H+ + GP GTGKT+ A++IA Sbjct: 3 YQALYRVWRPQVLKDVVGQEHIT---RTLRNALLQQKLSHAYLFSGPRGTGKTSAAKIIA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A +GV EIR+ ++ + + Sbjct: 60 KAVNCEQAPVEEPCNTCSTCTGIQDGSIVDVIEIDAASNNGVDEIRDIRDKVKFAPSGAS 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +A L +E+ + FI ATTE ++ ++SR + + K Sbjct: 120 YKVYIIDEVHMLTTGAFNALLKTLEEPPRHVIFILATTE--PHKIPLTIISRCQRFDFKR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++ + + + + +ED D+ + + IA G R AL+ L+ A+ Sbjct: 178 ITAHTMIKRMEEIIEDG-------DLAVDPDALSMIARASEGGMRDALSLLDQAISYADT 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + + I G S D YD++ AL L R+++ Sbjct: 231 S------VTLDDVLSIIGAAS------QDLMYDVMEALLDQQVAD----GLTAIDRLMSD 274 Query: 285 GGDP-------LYVARRCLAI-------ASEDVGNADPRAMQVAIAAWDCFTRVGP 326 G DP +++ R L + S D D R +A A + Sbjct: 275 GKDPGRFMEDFIFLTRDLLMVQAAPALDESGDRKLGDQRFEILASKASQSWLFALM 330 >UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Bacillales RepID=DPO3X_BACSU Length = 563 Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 56/314 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+H+ K L A+ H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVFRPQRFEDVVGQEHIT---KTLQNALLQKKFSHAYLFSGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV EIR+ ++ + +A Sbjct: 58 FAKAVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ FI ATTE ++ ++SR + + Sbjct: 118 VTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTE--PHKIPLTIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++++ I + + ++ + + + + + IA +G R AL+ L+ + Sbjct: 176 KRITSQAIVGRMNKIVD-------AEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 +LK E I G S + I L KS+ AL ++ Sbjct: 229 ------GDILKVEDALLITGAVSQLY----------IGKLAKSLHDKNVSDALETLNELL 272 Query: 283 TAGGDPLYVARRCL 296 G DP + + Sbjct: 273 QQGKDPAKLIEDMI 286 >UniRef50_A6BBM0 ATPase, AAA family (Fragment) n=1 Tax=Vibrio parahaemolyticus AQ3810 RepID=A6BBM0_VIBPA Length = 269 Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats. Identities = 151/217 (69%), Positives = 175/217 (80%) Query: 175 TQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKP 234 QA+ DK RG G D +AELVNGDAR +LN LE++ DMAE + G++ + Sbjct: 53 NQAINDKERGLGDTPANFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITL 112 Query: 235 ELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARR 294 +LL E+AGE+ +RFDNKGD +YDLISA+HKS+RGS PDAALYW AR+I AG DPLY+ARR Sbjct: 113 KLLAEVAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARR 172 Query: 295 CLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFK 354 LAIASEDVGNADPRAMQVA++AWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY A+K Sbjct: 173 LLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYVAWK 232 Query: 355 AALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRY 391 AL DA P+Y+VP HLRNAPT LMK+MGYG EYRY Sbjct: 233 QALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRY 269 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 87/381 (22%), Positives = 149/381 (39%), Gaps = 81/381 (21%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++ LA + RP++ + +GQQH+L + L ++ LH + G G GKTTLA + Sbjct: 1 MSYLVLARKWRPKSFEEVVGQQHVL---RALINGLDQNRLHHAFLFSGTRGVGKTTLARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + + Sbjct: 58 FAKSLNCEQGVSSTPCGVCQSCTEVDSGRFVDLIEVDAASRTKVDDTRELLDNVQYAPSQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLFATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + L I L +E +T I E +A +G R AL+ L+ Sbjct: 176 RRLELTQISDHLRYLLEQET-------IKAEPEALEQLARAADGSMRDALSLLDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + E + ++ G S D+ ++ AL K A L A + Sbjct: 228 -----GGGEVTSESVFQMLGSIS------QDQLILILDALLK----QDGKALLAQSAELA 272 Query: 283 TAGGD----PLYVARRCLAIAS-------EDVGNADPRAMQVAIAAWDCFTRVGPAEGER 331 G D ++ IA+ E V P+ ++A A +D E + Sbjct: 273 ALGRDFHVVFDFLLSALQQIATLQLVPDLEPVEANSPQLTELA-AQFD-------PETIQ 324 Query: 332 AIAQAIVY----LACA--PKS 346 + Q ++ L+ A PKS Sbjct: 325 LLYQIALHGKRDLSWAADPKS 345 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 125/320 (39%), Gaps = 55/320 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP N + +GQ H++ L AI + H+ + GP GTGKT++A++ A Sbjct: 3 YQALYRKYRPSNFDEVVGQTHIIQ---TLKNAIIQNRIAHAYLFCGPRGTGKTSIAKIFA 59 Query: 72 RYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 + N +E +A +GV E+R I++ + G+ Sbjct: 60 KTLNCTNSQDAPCGVCENCKMAANGSHPDIIEIDAASNNGVDEVRNLIDKVKYAPMQGKY 119 Query: 108 TILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSL 165 I +DEVH +A L IE+ + FI ATTE ++ ++SR + + + Sbjct: 120 KIYIIDEVHMMTSGAFNALLKTIEEPPAHVIFIFATTE--PNKVLPTIISRCQRFDFNKV 177 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 S DI+ L+ ++ + I + + IA+L +G R AL+ L+ Sbjct: 178 SVNDIKYRLSVVCKN-------EGIEIDQDGLTLIAQLADGGMRDALSILDQCVAYCT-- 228 Query: 226 DSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAG 285 + + +I G ++ I L S+ D + + G Sbjct: 229 ----SHIDVNDIRKIYGVITSED----------IGQLFSSIYKKDVDRFIKDIQKYSDMG 274 Query: 286 GDPLYVARRCLAIASEDVGN 305 D + + + + + Sbjct: 275 MDIKRLTADFIHMLKDSLIL 294 >UniRef50_B8LS10 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LS10_PICSI Length = 721 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 107/246 (43%), Positives = 147/246 (59%), Gaps = 5/246 (2%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 ++ PL+ RMRP + + +GQ HLL L +E + S++ WGPPGTGKTTLA I Sbjct: 202 SSTAPLSERMRPLLVDEVVGQDHLLGKNCILRSLLECDRVPSIVFWGPPGTGKTTLARAI 261 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A + +SAVTSG+KE+RE +E A++ + G+RT+ FVDEVHRFNK+QQDAFLP + Sbjct: 262 ANSVSYRFSSVSAVTSGLKEVREVLEEAKRMKKMGQRTLFFVDEVHRFNKAQQDAFLPVV 321 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY----- 185 EDG+I FIGATTENPSFE+N+ALLSR RV L L E I ++L +A+ D +G Sbjct: 322 EDGSIVFIGATTENPSFEVNNALLSRCRVLTLNKLQPEHIRKLLERAVSDSDKGLMVSLK 381 Query: 186 GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERS 245 G + + E ++ +GDAR ALN LE+ A A + + + G R+ Sbjct: 382 GFSAVKVEVEAIEFLSCASDGDARVALNVLEIAASAAVAHEKDQGSSQSTTSRSEVGIRN 441 Query: 246 ARFDNK 251 Sbjct: 442 FSDKED 447 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 82/195 (42%), Positives = 114/195 (58%), Gaps = 3/195 (1%) Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 V D + + E + +D G+ Y++ISALHKS+RGS PDAALYW AR+ Sbjct: 519 GSVTDGITVTVTLNDVKEALQCKHLLYDRTGEEHYNIISALHKSMRGSDPDAALYWLARM 578 Query: 282 ITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLA 341 + G +PLY+ARR + ASEDVG ADP A+ A+A + +G E +AQ + YL+ Sbjct: 579 LEGGENPLYIARRLVRFASEDVGLADPLALPQAVACYQACHFLGMPECNVNLAQCVAYLS 638 Query: 342 CAPKSNAVYTAFKAALADARE-RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYA 400 APKS AVY AA +E + VP+HLRNAPTKLMK++GYG+ Y Y ++ Sbjct: 639 LAPKSVAVYQGIVAAQRMVKEKGQNEPVPLHLRNAPTKLMKDIGYGKGYIYPPS--HSSP 696 Query: 401 AGEVYFPPEIAQTRY 415 + Y PP +A ++ Sbjct: 697 TRQEYLPPSLAGYKF 711 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 73/317 (23%), Positives = 124/317 (39%), Gaps = 56/317 (17%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 D + L + RP + +GQ A + L AI AG + H+ + GP GTGKT+ A+ Sbjct: 27 DMAYIALYRQWRPGSFKDLVGQ---TAVSRTLSHAISAGRIAHAYLFSGPRGTGKTSTAK 83 Query: 69 VIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRN 103 ++A+ N + E +A G+ E+R+ E+ + Sbjct: 84 ILAKSLNCEKGPTPEPCGVCKNCTKIADGTALDVFEIDAASNRGIDEMRDLREKVKFTPA 143 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 GR + +DEVH +A L +E+ + FI ATTE ++ + + SR + + Sbjct: 144 EGRYKVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTE--PHKVPATIQSRCQRFD 201 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 + ++ E+IE L ++ I E R IA +G R AL+ L+ A + Sbjct: 202 FRRITVEEIEARLAYVAQEMK-------IPCEKEALRLIARQADGGMRDALSLLDQCASL 254 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 L + E G ++ I L K++ A L A + Sbjct: 255 ------DGDTLTAACVEENLGLIG----------HEPIYRLTKAIGERAKGEVLETIAEL 298 Query: 282 ITAGGDPLYVARRCLAI 298 + G DP+ + Sbjct: 299 LALGKDPMQLLAELTIH 315 >UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERB2_AMOA5 Length = 629 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 133/343 (38%), Gaps = 57/343 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP + +GQ H+ L AI HL H+ + GP G GKTT A ++A Sbjct: 4 FVVSARKYRPSVFSHVLGQAHITT---TLKNAIRTNHLAHAFLFCGPRGVGKTTCARILA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N E +A + V+++R +++ R G Sbjct: 61 KAINCQQLTADIEPCNACDSCKSFNQRTSFNIYELDAASNNSVEDVRSLVDQVRYPPQNG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 I +DEVH +++ +AFL +E+ FI ATTE ++ +LSR +++ + Sbjct: 121 AYKIYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTE--KHKVLPTILSRCQIFDFQ 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + EDI Q L E + I +E I+ +G R AL+ +++ Sbjct: 179 RIKPEDIVQQLKNVSEQ-------EHIPYDEEALHLISLKADGALRDALSMFDVIVSFGA 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + L+ + + Y L +++ + A L Y II Sbjct: 232 GKLTYEATLENLHILD----------------YSCYFKLTEAILQNDIKACLLIYDEIIQ 275 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGP 326 +G D LY +A + DP+ + + A R G Sbjct: 276 SGFDGLYFLEGLVAHFRSLLVAQDPQTLPLLEVAPSIQERYGM 318 >UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79 Tax=Bacillaceae RepID=Q65PK1_BACLD Length = 566 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 122/314 (38%), Gaps = 56/314 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+H+ K L A+ H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVFRPQLFEDVVGQEHIT---KTLQNALLQKKFSHAYLFSGPRGTGKTSAAKL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV EIR+ ++ + +A Sbjct: 58 FAKAVNCERAPVSEPCNECSACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ FI ATTE ++ ++SR + + Sbjct: 118 VTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTE--PHKIPLTIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++++ I + + +E + + + D IA +G R AL+ L+ + Sbjct: 176 KRITSQAIVGRMKKIVE-------AEQLKVQDGALDIIASAADGGMRDALSLLDQAVSFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E+ + + + Y I L ++ AL ++ Sbjct: 229 G--------------EELTVDDALLITGAVSQHY--IGKLASTLHEKNVSGALETLNELL 272 Query: 283 TAGGDPLYVARRCL 296 G DP + + Sbjct: 273 QQGKDPAKLIEDMI 286 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 136/345 (39%), Gaps = 57/345 (16%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLA 67 + ++ L RP + + GQ+H++ K L A+E + H+ + GP GTGKT++A Sbjct: 5 CNMGYKALYRTYRPNSFDEVAGQKHIV---KTLQNAVEQNKIAHAYLFCGPRGTGKTSIA 61 Query: 68 EVIARYANAD------------------------VERISAVTSGVKEIREAIERARQNRN 103 ++ A+ N + +E +A +GV+E+R IE+ + Sbjct: 62 KIFAKVINCESKEHKPCLQCDNCLAVQNGSHPDIIEIDAASNNGVEEVRNLIEKVKYAPL 121 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 G+ + +DEVH + +A L IE+ + FI ATTE ++ ++SR + + Sbjct: 122 KGKYKVYIIDEVHMMSAGAFNALLKTIEEPPEHVIFILATTE--PHKVLPTIISRCQRFD 179 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 + +I + +E + I D+ IA+L +G R AL+ L+ Sbjct: 180 FTKVPKNEIVSRIHTILEK-------EHIECDDDVIELIAQLADGGLRDALSILDQCIAY 232 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 A ++ + + EI G + + K + + P + + Sbjct: 233 AT------NHIELQHINEIYGITTVQEKMKLFHH----------IFNNEPVDLMDMLDGM 276 Query: 282 ITAGGDPLYVARRCLAIASEDV--GNADPRAMQVAIAAWDCFTRV 324 + G D + + + E + ++ +++ + Sbjct: 277 LEKGLDIPRLTVDLIELLKESIIFEYTKDSSLLHSLSNEQAVEFI 321 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 55/318 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L RP + + +GQQH++ L A++ + H+ + GP GTGKTT+A++ Sbjct: 1 MSYKALYRTYRPSSFEEVVGQQHIVT---TLKNAVKQNKIAHAYLFCGPRGTGKTTIAKL 57 Query: 70 IARYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 +A+ N + VE +A +GV E+RE IE+ + G Sbjct: 58 LAKAVNCEDQQNAPCNQCRSCLAIQQGNHPDIVEIDAASNNGVDEVRELIEKVKYAPLEG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH + +A L +E+ + FI ATTE ++ ++SR + Y Sbjct: 118 RYKVYIIDEVHMMSSGAFNALLKTLEEPPSHVIFILATTE--PQKVLPTIISRCQRYDFS 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + +I + +E + I DE R +A+L +G R AL+ ++ A+ Sbjct: 176 KVGQNEIITRVRCVLEQ-------EHIECEDEALRLVAQLADGGMRDALSIMDQCIAYAQ 228 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + EI G + + I L + + + L + Sbjct: 229 ------NHITAAHVNEIYGITTVS---------EKIEML-QWIFQHQAQSLLEKIRLLNE 272 Query: 284 AGGDPLYVARRCLAIASE 301 G D + + I E Sbjct: 273 KGVDIKRLTSDLIEILKE 290 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 76/323 (23%), Positives = 136/323 (42%), Gaps = 61/323 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L RP+ GQ+ ++ L A+ + H+ I GP GTGKT++A++ Sbjct: 1 MSYVALYRTYRPKFFKDVFGQKVIVQ---TLQNALLNEKIGHAYIFSGPRGTGKTSVAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A +GV EIR+ ++ + + Sbjct: 58 VAKALNCLEAPAKEPCGKCDVCLGVDRGDVPDIIEIDAASNNGVDEIRDLRDKVKYAPSI 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 GKYKVYIIDEVHMLTTAAFNALLKTLEEPPKYVVFILATTE--PHKVPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ + IE+ L Q + +++ + E AIA G R AL+ L+ + Sbjct: 176 KNIEMDQIEENLKQII-------NKENLKITPEALTAIARTAEGGMRDALSLLDQVVSFT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++G S R+ I+ L K + P AL +II Sbjct: 229 N------DEITEEDIYTVSGGLSRRY----------INELLKVIYLKQPQKALDLLNQII 272 Query: 283 TAGGDPLYVARRC--LAIASEDV 303 G D +AR + +A DV Sbjct: 273 KDGKD---IARMVSDIILALRDV 292 >UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MH32_BDEBA Length = 621 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 139/358 (38%), Gaps = 67/358 (18%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 ++Q +A + RP++ +GQ H+ L A++ G L H+++ GP GTGKT+ A ++ Sbjct: 18 SYQVIARKWRPQSFTDVVGQNHITQ---TLSNALKNGRLPHALLFTGPRGTGKTSSARIL 74 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ +E A +GV IRE + ++G Sbjct: 75 AKALRCPNAQNFVPCNDCYSCNEIAGGSSIDVIEIDGASNNGVDAIRELRDTVAFMPSSG 134 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + I +DEVH + S +A L +E+ + FI ATTE ++ +LSR + + + Sbjct: 135 KYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVVFIMATTE--VHKIPQTILSRCQRFDFR 192 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 +ST I + L + + + DE +A +G R + + L+ + A Sbjct: 193 RISTRSITERLKLICDR-------EGVTADDEALWVVARQGDGSMRDSQSLLDQVITFAN 245 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 L + EI G ++ ++AL A L +I Sbjct: 246 G------PLTRASVVEILG------LTDRALLFETLNALID----RNSQAVLKVIEKIAA 289 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLA 341 AG +P ++ L + + + ++ + + E QA+ +A Sbjct: 290 AGFEPHLYSQDLLEMIR--------NLLLIKVSEAQASQILEMPDSEL---QALSEMA 336 >UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Bacteroidales RepID=C3QNI8_9BACE Length = 621 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 72/312 (23%), Positives = 116/312 (37%), Gaps = 45/312 (14%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + A + RP +GQ+ L L AI L H+ + GP G GKTT A + A Sbjct: 4 YIVSARKYRPSTFESVVGQRALTT---TLKNAIATQKLAHAYLFCGPRGVGKTTCARIFA 60 Query: 72 RYANA-----------DVERI---------------SAVTSGVKEIREAIERARQNRNAG 105 + N E +A + V +IR+ +E+ R G Sbjct: 61 KTINCMTPTADGEACNQCESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + S +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 121 KYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTE--KHKILPTILSRCQIYDFN 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 +S ED L+ + I E IA +G R AL+ + + Sbjct: 179 RISVEDTVNHLSYVA-------SKEGITAEPEALNVIAMKADGGMRDALSIFDQVVSFTG 231 Query: 224 VDDSGKRVLKPELLTE----IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 + + K V+ + + + D L+K GS L + Sbjct: 232 GNITYKSVIDNLNVLDYEYYFRLTDCFLENKVSDALLLFNDILNKGFDGSHFITGLSSHF 291 Query: 280 RIITAGGDPLYV 291 R + G DP+ + Sbjct: 292 RDLLVGKDPVTL 303 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 135/347 (38%), Gaps = 56/347 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L RP+ +GQ+H++ L AI + H+ + GP GTGKTT A+V Sbjct: 1 MSHIALYRAWRPQTFQDMVGQRHIIQ---TLQNAIREDRVSHAYLFNGPRGTGKTTAAKV 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A G+ EIR+ ++ R + Sbjct: 58 LAKAVNCERGPAEEPCNECDACRGITAGHIMDVIEIDAASNRGIDEIRDIRDKVRYAPSE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ G + FI ATTE +L + ++SR + + Sbjct: 118 VRYKVYIIDEVHMLTSEAFNALLKTLEEPPGHVIFILATTE--PHKLPATIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + +S E+ + L + D + I ++ IA L G R A++ LE +A Sbjct: 176 RQVSLEEQSERLFEICRD-------EGIEAEEDAIAYIARLSEGGMRDAISLLEQVAAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + ++ G +A D+FY AL +++R A + + Sbjct: 228 -----GGSRITLDGAVDVTGGMAA------DQFY----ALAEAIRDRNVAAIMPLVEGLT 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEG 329 AG + + + V D G A+ Sbjct: 273 QAGKSADKCMENLIFYFRDLLVLKLAPQGAVTERVVDAERFRGMADA 319 >UniRef50_B2GIA8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B2GIA8_KOCRD Length = 556 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 100/240 (41%), Positives = 134/240 (55%), Gaps = 9/240 (3%) Query: 205 NGDARRALNTLEMMADMAEVDDSGKR-VLKPELLTEIAGERSARFDNKGDRFYDLISALH 263 GDA E + AE G R V+ E E + R+D +GD+ YD++SA Sbjct: 323 GGDA-------EQPSGPAEAQGPGTRPVVTLEHAEEAVNRAAVRYDRQGDQHYDVVSAFI 375 Query: 264 KSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTR 323 KS+RGS DAA+++ AR+I AG DP ++ARR + ASED+G ADP A+Q A+AA Sbjct: 376 KSLRGSDVDAAMHYLARMIEAGEDPRFIARRLIISASEDIGMADPTALQTAVAAAQAVQL 435 Query: 324 VGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEM 383 +G EG +AQA+ +LA APKSNA Y A AA+AD R VP HLR+A ++ Sbjct: 436 IGMPEGRIPLAQAVAHLATAPKSNASYLAVDAAIADVRAGRAGPVPPHLRDAHYPGAADL 495 Query: 384 GYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPI 443 G+G YRYAHD NA A + Y P E+ YY PT G E ++ +L L + P Sbjct: 496 GHGHGYRYAHDAPNAVATQQ-YPPDELVGRDYYTPTPYGHEKQVSHRLEILRHMVRGGPD 554 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 99/222 (44%), Positives = 137/222 (61%), Gaps = 7/222 (3%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLH----SMILWGPPGTGKTTLA 67 + PLA RMRP L + +GQ+HLL G PL + S+ILWGPPGTGKTT+A Sbjct: 33 SRAPLAVRMRPRTLDEVVGQKHLLRPGSPLRALVNGSSGPAAPSSVILWGPPGTGKTTIA 92 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAF 126 +VIAR +SA+T+GVK++R ++ A R GR T+LF+DE+HRF K+QQDA Sbjct: 93 QVIARGHGTTFVELSALTAGVKDVRRVMDEALTARDLHGRTTVLFLDEIHRFTKAQQDAL 152 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 LP +E+G + + ATTENPSF + S LLSR+ + L+ L DI ++L +A+ D RG Sbjct: 153 LPGVENGWVILVAATTENPSFSVISPLLSRSLMLTLQPLERRDIGELLDRAVTD-PRGLD 211 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSG 228 G + L E R + ++ GDAR+AL +LE A +A G Sbjct: 212 G-AVDLAPEAREHLLDVAGGDARKALTSLEAAAGVALSHAGG 252 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 277 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 126/312 (40%), Gaps = 56/312 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L RP+ + +GQ H+ + + A+ + H+ + GP GTGKT+LA++IA Sbjct: 3 YQALYRVYRPQRFDEVVGQAHIT---RTIQNALMEERMSHAYLFSGPRGTGKTSLAKIIA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + E +A +GV EIRE ++ + + Sbjct: 60 KAINCEQAPVNEPCNECPTCRAITEGSSPDVFEIDAASNNGVDEIREIRDKVKYPPSEAA 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ FI ATTE ++ + ++SR + + +K Sbjct: 120 YKVYIIDEVHMLSTGAFNALLKTLEEPPAHAIFILATTE--PHKIPATIISRCQRFDVKR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + + + + + D+T GY + R IA +G R AL+ L+ + Sbjct: 178 HEVDQLMERMQYILSDQTIGY-------TETALRLIARAADGGMRDALSLLDQAVAFSNG 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 D L + + E+ G + + A+ +++ D L ++ A Sbjct: 231 D------LTDDAVLEVTGAVE----------DEALLAVANALQAHQVDQLLQTLEKMQRA 274 Query: 285 GGDPLYVARRCL 296 G D + Sbjct: 275 GKDLKRFVEDLV 286 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 72/327 (22%), Positives = 128/327 (39%), Gaps = 62/327 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L + RP+ GQ+H++ L I+A + H+ + G GTGKTT+A++ Sbjct: 1 MSYQALYRKFRPQEFEDVKGQEHIVT---TLKNQIKADRIGHAYLFCGTRGTGKTTVAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV IR+ E Sbjct: 58 FAKAVNCEHPVDGSPCGECPSCRAITEGSSMNVIEIDAASNNGVDNIRQIREEVTYRPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y Sbjct: 118 GRYKVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S + I L+ ME + + + + R +A+ +G R AL+ L+ Sbjct: 176 HRISIDTIASRLSDLMEQ-------EHVEVEERAIRYVAKAGDGSMRDALSLLDQCIAFH 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + L E + E+ G ++ S L + + A+ +I Sbjct: 229 LGEK-----LTYENVLEVLGA----------VDTEVFSRLLRRILDEDVTGAIRILGELI 273 Query: 283 TAGGDPLYVA-------RRCLAIASED 302 G + + R L + S D Sbjct: 274 DEGRELSQLVNDFTWYMRNLLLLQSSD 300 >UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C334AE Length = 726 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 136/316 (43%), Gaps = 59/316 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ +GQ+ ++ L AI + + H+ + GP GTGKT+ A + A Sbjct: 4 YEPLYQKYRPQTFDGLVGQKSIVL---TLSNAIRSQRISHAYLFTGPRGTGKTSTARIFA 60 Query: 72 RYANA---------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 + N +E +A +GV IRE IE+A+ Sbjct: 61 KSINCLASDAPSISPCGNCEACQTINKGSSLDVIEIDAASNTGVDNIREIIEQAKFAPMQ 120 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R I VDE H + + +A L +E+ + FI ATT+ + ++SR + + Sbjct: 121 LRYKIYIVDECHMLSTAAFNALLKILEEPPKHVIFILATTD--PQRVLPTIISRCQRFDY 178 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ E+I Q L + ++ ++I + + +A++ NG R A + L+ ++ Sbjct: 179 RRIAIEEIVQHLGKIAKE-------ENINIEIDALNLVAKISNGGLRDAESLLDQLSLFT 231 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G S R DL+S L +++R + + + ++I Sbjct: 232 G-------KINSEKVNDLVGLISER---------DLLS-LLQAIRSNNSKLIIEFCGQLI 274 Query: 283 TAGGDPLYVARRCLAI 298 G +PL + + Sbjct: 275 NKGKEPLTILQNIANF 290 >UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 Tax=Verrucomicrobia RepID=B1ZQU6_OPITP Length = 395 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 92/407 (22%), Positives = 156/407 (38%), Gaps = 77/407 (18%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTL 66 S +Q +A + RP+ +GQ H++ + L AI + H+ + GP GTGKT+ Sbjct: 1 MSSTGYQVIARKWRPQTFDDVVGQDHVV---RTLKNAIARNRIAHAYLFVGPRGTGKTST 57 Query: 67 AEVIARYANAD-------------------------VERISAVTSGVKEIREAIERARQN 101 A + A+ N +E A +GV ++R+ + + Sbjct: 58 ARIFAKALNCTDGPKADFDPNDPACKAIAEGSHLDVIEIDGASNNGVDQVRDLRDTVQYA 117 Query: 102 RNAGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARV 159 GR + +DEVH + + +A L +E+ G + F+ ATT+ ++ ++SR + Sbjct: 118 PAQGRYKVYIIDEVHMLSAAAFNALLKTLEEPPGHVKFVFATTD--PQKVLPTIISRCQR 175 Query: 160 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + LK + + I L Q + I + IA + +G R A + L+ M Sbjct: 176 FDLKPIPPDLIIARLKQIA-------ASEKITISAAALECIARMADGGMRDAQSILDQMI 228 Query: 220 DMAEVDDSGKRVLK------PELLTEIAGERSAR-----------FDNKGDRFYDLISAL 262 D S VL E + E+AG +A D G L+S L Sbjct: 229 SFCGTDISEADVLDVYGLVSAEKIAELAGALAAGDHRKIVAIVDDCDTNGRDLVRLLSDL 288 Query: 263 HKSVRGSAPDAALYWYARIITAGGDPLYVAR--RCLAIASEDVGNADPRAMQVAIAAWDC 320 VR + DA + R GG+P+ + R L E + Sbjct: 289 QAFVRAALLDA-IAQGGRSAKLGGEPMTTEQLTRMLDALRE----------------GEG 331 Query: 321 FTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 ++G AE + ++ A +S A+ + K A A E P + Sbjct: 332 AVKLGLAE-KINFEVTLLKAVDASRSRAIDSLIKELAALAEETPATE 377 >UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 Tax=Staphylococcus RepID=B9DLF5_STACT Length = 583 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 56/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH-LHSMILWGPPGTGKTTLAEV 69 +Q L RP++ +GQ+H+ K L AI G H+ I GP GTGKT++A+V Sbjct: 1 MNYQALYRMYRPQSFDDVVGQEHVT---KTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKV 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A +GV EIR ++ + + Sbjct: 58 FAKAINCPNSVDGEPCNECDICKSITQGSNSDVIEIDAASNNGVDEIRNIRDKVKYAPSQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + + +DEVH +A L +E+ FI ATTE ++ ++SRA+ + Sbjct: 118 SKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTE--PHKIPPTIISRAQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ + I + L E Q I DE IA+ G R AL+ ++ Sbjct: 176 KAIGLDQIIERLRYVAE-------SQHIEYDDEAIAFIAKASEGGMRDALSIMDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L + + G ++AL V A Y + I Sbjct: 228 -----GDEHLTLQDALNVTGSVDEAS----------LNALLNDVANGQVKDAFARYHQFI 272 Query: 283 TAGGDPLYVARRCLAIASEDV 303 G + + + + + Sbjct: 273 AEGKEVNRLINDLIYFVRDTI 293 >UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDS2_THEAB Length = 480 Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 140/349 (40%), Gaps = 56/349 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 Q L + RP+ ++ +GQ H+ +++ G + H+ I GP GTGKTT+A ++A Sbjct: 1 MQALYRKYRPKLFSEVVGQNHV---KTLFLNSLKNGEISHAYIFAGPRGTGKTTVARILA 57 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A G+ EIR+ E + G Sbjct: 58 KSLNCENKNGVEPCNKCNTCQSIDNGSFMDVLEIDAASNRGIDEIRKIRETVGYHAAQGN 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH K +A L +E+ + FI ATT NP ++ ++SR +V K+ Sbjct: 118 YKVYIIDEVHMLTKEAFNALLKTLEEPPSNVVFILATT-NPE-KIPQTIISRCQVIDFKN 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L+ EDI + L + ++I + E IA+ NG R AL LE ++ + Sbjct: 176 LTIEDIIKRLEFVCKK-------ENINISQEALNEIAKRANGGMRDALTILEQVSKSSSK 228 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 D + E + E G ++I+ + S++ ++ + Sbjct: 229 D------ITIEDVRETLGLVPI----------EVINEMIDSIKIGDIKKTTEIIEKVYFS 272 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAI 333 G DP + L + + D ++ + + +E + + Sbjct: 273 GKDPEVFLMQLLEEMILKIESGDYELIEFLKPLSEILKDIKYSEEKLIL 321 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 70/327 (21%), Positives = 126/327 (38%), Gaps = 62/327 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L + RP+ GQ+H++ L I+A + H+ + G GTGKTT+A++ Sbjct: 1 MSYTALYRKFRPQEFEDVKGQEHIVT---TLKNQIKADRIGHAYLFCGTRGTGKTTIAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV IR+ E Sbjct: 58 FAKAVNCEHPVDGSPCGECPACRAIAAGNSMNVIEIDAASNNGVDNIRQIREEVEYRPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y Sbjct: 118 GKYKVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + +S E I L + ME + + + + R IA+ +G R AL+ L+ Sbjct: 176 RRISIETISARLMELMEK-------EQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFY 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 D L + + E G ++ S L + + A+ ++ Sbjct: 229 LGQD-----LTYDKVLETLGA----------VDTEIFSRLLRQILEKNVTGAIGVIDEMV 273 Query: 283 TAGGDPLYVA-------RRCLAIASED 302 G + R + + S D Sbjct: 274 IEGRELGQFVNDFTWYLRNLMLVQSSD 300 >UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subunits n=3 Tax=Bacillus RepID=A8FAE4_BACP2 Length = 570 Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 124/314 (39%), Gaps = 56/314 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+H+ K L A+ H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVFRPQVFEDVVGQEHIT---KTLQNALLQKKFSHAYLFSGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV EIR+ ++ + +A Sbjct: 58 FAKAVNCEKSPVSEPCNECDACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ FI ATTE ++ ++SR + + Sbjct: 118 VTYKVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTE--PHKIPLTIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++T+DI + + ++ + + + + + IA +G R AL+ L+ + Sbjct: 176 KRITTKDIVGRMQKIVD-------AESLNVQEGSLEIIASAADGGMRDALSLLDQAISFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 L + I G S IS L +++ AL ++ Sbjct: 229 ------GEQLTIDDALLITGAVSQ----------QFISQLAEAIFDQNIAVALDTLNELL 272 Query: 283 TAGGDPLYVARRCL 296 G D + + Sbjct: 273 QQGKDAAKLIEDMI 286 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 54/313 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP+ +GQ+H++ L AI + H+ + GP GTGKT++A+V A Sbjct: 3 YQALYRQWRPKYFRDLVGQEHVVT---TLKNAISQSRISHAYLFSGPRGTGKTSVAKVFA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N D +E +A G+ EIRE + + + G Sbjct: 60 KALNCDHSQDNEPCGQCSRCIEHDRGTFMDILEIDAASNRGIDEIREIRDHVAYSPSEGN 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + VDEVH +A L +E+ + FI ATTE +L +LSR + + Sbjct: 120 YKVYIVDEVHMLTTEAFNALLKTLEEPPDYVIFILATTE--PHKLPMTVLSRCQRFDFYR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 LST IE+ L ++ +++ E+ IA+ +G R AL+ L+ Sbjct: 178 LSTSKIEKQLQNVID-------SKNLSATKESLSIIAKKSDGGMRDALSLLDQSLSFLGS 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + LK + + E+ G S D FYDL+ AL + L ++ + Sbjct: 231 GEQ----LKVDHVLEVTGTVS------EDTFYDLLMALKEG----DLAQILNIVQQLSDS 276 Query: 285 GGDPLYVARRCLA 297 G D + Sbjct: 277 GKDFGQFLNDLIV 289 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 129/329 (39%), Gaps = 55/329 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L RP+ + GQ+H++ L AI+ + H+ + GP GTGKTT+A++ Sbjct: 1 MSYKALYRSYRPQTFGEVAGQEHIVT---TLKNAIKENRISHAYLFAGPRGTGKTTVAKL 57 Query: 70 IARYANAD-----------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 +A+ N +E +A +GV E+R+ I++ + G+ Sbjct: 58 LAKALNCTGENPPCDQCPNCKAITVGEHPDVIEIDAASNNGVDEVRDLIDKVKYAPINGK 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ I F+ ATTE ++ ++SR + + K Sbjct: 118 YKVYIIDEVHMMSTGAFNALLKTLEEPPAHIVFVLATTE--PHKILPTIISRCQRFDFKK 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + DI L ++ + + Y ++A+L G R AL+ LE Sbjct: 176 VENHDIISRLEYVLKSENKKY-------ELSALESVAKLAEGGMRDALSILEQCLAY--- 225 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 L E + + G S D + K + L +++ Sbjct: 226 ----NNELTVESVNMVYGLLSM----------DNKISFIKQLLSKDIKGVLTSLDNMLSG 271 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQV 313 D + + + + + + + + + Sbjct: 272 SIDIKRLTFDLVDVLKDIIIYKNTQDVSI 300 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 140/368 (38%), Gaps = 65/368 (17%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEVIARY 73 L RP+ + +GQ+H+ + L AI G LH +L GP GTGKTT+A ++A+ Sbjct: 5 ALYREYRPQRFGEVVGQEHIT---RTLRNAIVQGRLHHAYLLSGPRGTGKTTVARILAKA 61 Query: 74 ANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRT 108 N +E +A G+ EIR+ ++ + Sbjct: 62 VNCLNPQDGEPCNECEACRRITSGEALDLIEIDAASNRGIDEIRDLRDKVNFAPVELKYK 121 Query: 109 ILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DEVH + +A L +E+ + F+ ATTE +L +LSR + + + LS Sbjct: 122 VYIIDEVHMLTEPAFNALLKTLEEPPAHVLFVLATTE--KQKLPITILSRCQAFDYRRLS 179 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 ++I L + G Q + E AIA +G R AL+ L+ + A + Sbjct: 180 ADEIVARLREVC-------GKQGLKASPEALAAIARHADGGMRDALSLLDQVMAYAAEGE 232 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 + ++ + G D +RG AAL W ++ AG Sbjct: 233 -----ITLDMTLAVLGTAPLDQFLALDGHL---------LRG-DVGAALLWLDEMVRAGK 277 Query: 287 DPLYVARRCLAIASEDV---------GNADP-RAMQVAIAAWDCFTRVGPAEGERAIAQA 336 D + R LA + + P A++ A + F R + QA Sbjct: 278 DLRQLVRDYLAHLRDLLLVKLEAGAQVLGLPAEALEQMRARAEPFAERQLIRAIRLLGQA 337 Query: 337 IVYLACAP 344 L +P Sbjct: 338 ETELRLSP 345 >UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 Tax=Shewanella RepID=A1RIP8_SHESW Length = 984 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 126/318 (39%), Gaps = 56/318 (17%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLA 67 S ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA Sbjct: 26 SSMSYQVLARKWRPATFEQMVGQSHVLHA---LTNALSQQRLHHAYLFTGTRGVGKTSLA 82 Query: 68 EVIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNR 102 + A+ N + +E +A + V + RE ++ + Sbjct: 83 RLFAKGLNCEQGVTATPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRP 142 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVY 160 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + Sbjct: 143 TRGRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQF 200 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 LKSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 201 NLKSLTQDEIGTQLNHILTQ-------EQLPFEVEALTLLAKAANGSMRDALSLTDQAIA 253 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 G + + + G + + AL K++ + + A+ Sbjct: 254 F------GGGTVMLTQVQTMLGSIDEQH----------VIALLKALTDADITVLMQTSAQ 297 Query: 281 IITAGGDPLYVARRCLAI 298 ++ G D V R L + Sbjct: 298 VLAYGADAQEVLRSLLEL 315 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 128/316 (40%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQVVGQSHVLHA---LTNALSQNRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQRLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + GY D + +A+ NG R AL+ + Sbjct: 176 KSLTLDEICVQLGHILAQEQVGY-------DDGAVKLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G ++ + + G D + ++ L K++ D + ++ Sbjct: 228 -----GAGQVRLTQVQTMLGTI--------DEHHVIV--LLKALCDGDVDLLMKVTGDVL 272 Query: 283 TAGGDPLYVARRCLAI 298 + G DP V R L + Sbjct: 273 SFGADPHEVLRSLLEL 288 >UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 Tax=Nostocaceae RepID=B2J7Q6_NOSP7 Length = 707 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 139/346 (40%), Gaps = 62/346 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++PL + RP++ A+ +GQ+ + L AI + + + GP GTGKT+ A + Sbjct: 1 MSYEPLHHKYRPKSFAELVGQEAI---ATTLTNAIGTSKIAPAYLFTGPRGTGKTSSARI 57 Query: 70 IARYANA---------------------------DVERISAVTSGVKEIREAIERARQNR 102 +A+ N +E +A +GV IRE IE+A+ Sbjct: 58 LAKSLNCLKSDRPTAEPCGVCDVCQGITKGYALDVIEIDAASNTGVDNIRELIEKAQFAP 117 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVY 160 R + +DE H + +A L +E+ + F+ ATT+ + ++SR + + Sbjct: 118 VQCRYKVYVIDECHMLSTQAFNALLKTLEEPPRHVVFVLATTD--PQRVLPTIISRCQRF 175 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 + + E + + L+ ++I + E +A+L G R A + L+ + Sbjct: 176 DFRRIQLEAMVKHLSAIA-------SKENIHISPEAVTLVAQLSQGGLRDAESLLDQLGL 228 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 +A V+ P+ + ++ G S + + L ++ P+A L + Sbjct: 229 LAG-------VVTPDRVWDLVGTVSEQD----------LLGLLNAIAQDKPEAVLDSTHK 271 Query: 281 IITAGGDPLYVARRCLAIASEDVGNAD--PRAMQVAIAAWDCFTRV 324 I+ G +PL + A D+ A P + +T + Sbjct: 272 ILDRGREPLTFLQNLAAF-YRDLLIAKTAPNRHDLVACTQQTWTAL 316 >UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Bacteroidales RepID=C6ITP2_9BACE Length = 619 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 122/330 (36%), Gaps = 57/330 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + A + RP +GQ+ L L AI L H+ + GP G GKTT A + A Sbjct: 4 YIVSARKYRPSTFESVVGQRALTT---TLKNAIATQKLAHAYLFCGPRGVGKTTCARIFA 60 Query: 72 RYANA-----------DVERI---------------SAVTSGVKEIREAIERARQNRNAG 105 + N + E +A + V +IR+ +E+ R G Sbjct: 61 KTINCMTPTTDGEACNECESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + S +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 121 KYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTE--KHKILPTILSRCQIYDFN 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 +S ED L+ ++I E IA +G R AL+ + + Sbjct: 179 RISVEDTVNHLSYVAAK-------ENITAEPEALNVIAMKADGGMRDALSIFDQVVSFTG 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + K V++ + + Y+ L + AL + ++ Sbjct: 232 GNITYKSVIENLNVLD----------------YEYYFRLTDCFLENRVSDALLLFNDVLN 275 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D + + + + + D + + Sbjct: 276 KGFDGSHFITGLSSHCRDLLVSKDAATLPL 305 >UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMX9_9BACE Length = 623 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 122/330 (36%), Gaps = 57/330 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + A + RP +GQ+ L L AI L H+ + GP G GKTT A + A Sbjct: 4 YIVSARKYRPATFDTVVGQRALTT---TLKNAIANQKLAHAYLFCGPRGVGKTTCARIFA 60 Query: 72 RYANA-----------DVERI---------------SAVTSGVKEIREAIERARQNRNAG 105 + N + E +A + V++IR IE+ R G Sbjct: 61 KTINCLHPTADGEACNECESCRAFNEQRSYNIHELDAASNNSVEDIRSLIEQVRIPPQIG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH +++ +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 121 KYKVYIIDEVHMLSQAAFNAFLKTLEEPPHHAIFILATTE--KHKILPTILSRCQIYDFN 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 +S D + L + I E IA+ +G R AL+ + + Sbjct: 179 RISVNDTVEHLENVARK-------EHIEAEPEALNVIAQKADGGMRDALSIFDQVVSFTN 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + V++ + + Y+ L + + L + ++ Sbjct: 232 GHITYQSVIENLNVLD----------------YEYYFKLTDAFLENRVSDCLLTFNEVLK 275 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D + + + + + D +Q+ Sbjct: 276 KGFDGNHFITGLTSHFRDLLVSRDDETLQL 305 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 129/321 (40%), Gaps = 63/321 (19%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L RP+ +GQ+H+ L A+ L H+ + GP GTGKT+ A+++A Sbjct: 3 YTALYRVYRPQTFQDVVGQEHVTT---TLRNALRENRLSHAYLFNGPRGTGKTSAAKIMA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A GV+EIR+ ++ + + R Sbjct: 60 KAVNCEQPIDGEPCNQCDTCRAISNGSVTDVLEIDAASNRGVEEIRDIRDKVKFAPSDVR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +A L +E+ + FI ATTE +L + ++SR + + Sbjct: 120 YKVYIIDEVHMLTTEAFNALLKTLEEPPSHVIFILATTE--PHKLPATIISRCQRFDFHR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + + +L + + Q + + ++ + +A++ G AR AL+ L+ ++ Sbjct: 178 IPLRVMVDLLQRICQ-------SQGVQVEEQALQLVAKMAEGGARDALSLLDQAISYSK- 229 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 ++ + +I G + + + R + + + + +++ Sbjct: 230 -----DEVRASDIMQITGTVAQSYFSVLARH----------IAENDIAQVMEQFDKVMVQ 274 Query: 285 GGDP-------LYVARRCLAI 298 G DP LY R L + Sbjct: 275 GKDPEQFLHDFLYYYRDMLLL 295 >UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 Tax=Alkaliphilus RepID=A8MKQ3_ALKOO Length = 563 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 75/348 (21%), Positives = 126/348 (36%), Gaps = 65/348 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L R RP+ IGQ ++ L I + ++ H+ + G GTGKT+ A++ Sbjct: 1 MSYKALYRRFRPKVFEDVIGQDQVIT---ILKNQISSSNIAHAYLFTGTRGTGKTSTAKI 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 AR N +E +A +GV +RE E + + Sbjct: 58 FARAVNCLSAEDANPCNQCEVCEGILTENIMDVIEIDAASNNGVDNVREIRENVKYPPSK 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ I +DEVH + +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 GKYKIYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTE--PHKIPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K + DI + L ED I +E R IA +G R AL+ LE Sbjct: 176 KPVRINDIMKRLESICEDI-------GIKTEEEALRLIALNSDGALRDALSILEQCISYT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E L + I G + Y+ I L + + L I+ Sbjct: 229 E------DTLTYTNVVNILGMVN----------YEFIFDLVDKIAAKDTSSVLTLINDIL 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGE 330 G D + + ++ + +A + E Sbjct: 273 MEGKDAGILMKDIISHFRS---------ILLAKMNVQLDELLTLPEER 311 >UniRef50_C5NYK0 DNA polymerase III subunit gamma/tau n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK0_9BACL Length = 569 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 68/304 (22%), Positives = 130/304 (42%), Gaps = 43/304 (14%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 FQ L + RP+ +GQ H++ L AI+ + H+ + +G GTGKT++A++ A Sbjct: 2 FQALYRKYRPQTFNDIVGQNHIV---SVLKNAIDKDQISHAYLFYGSRGTGKTSIAKIFA 58 Query: 72 RYANAD----------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 N + +E +A +GV E+R+ E + G+ + +DEVH + Sbjct: 59 NEVNGNEIYQKENVDIIEIDAASNNGVDEVRDIKEAIKFLPTEGKYKVYIIDEVHMLTTA 118 Query: 122 QQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 +A L +E+ + FI ATTE ++ + +LSR + + K+LS E + L + Sbjct: 119 AFNALLKTLEEPPAHVIFILATTE--IHKIPATILSRCQRFEFKNLSQEQLIDRLKYIAK 176 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 + +++V+ + IA L G R A++ L+ +++ AE + + E Sbjct: 177 E-------ENLVIEEAAIEKIATLAKGGLRDAISILDQVSNYAE-------EITLNHILE 222 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + S D I ++ + +L Y + D + + Sbjct: 223 VTSSIS----------EDDILEFYRGLLQGDVTKSLLKYNEFVAQAKDTKLLLNDLIN-V 271 Query: 300 SEDV 303 + D+ Sbjct: 272 TRDI 275 >UniRef50_C7M8P5 DNA polymerase III, subunits gamma and tau n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M8P5_CAPOD Length = 569 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 73/302 (24%), Positives = 129/302 (42%), Gaps = 33/302 (10%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 N F A + RP++ +GQQ + L AIE HL +++ GP G GKTT A + Sbjct: 2 NHFIVSARKYRPQSFRDVVGQQAITN---TLLNAIENNHLAQALLFTGPRGVGKTTCARI 58 Query: 70 IARYAN--------------ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEV 115 +A+ N E +A + V +IR+ IE+ R G+ + +DEV Sbjct: 59 LAKKINEQTSGVEDENDFAFNVFELDAASNNSVDDIRKLIEQVRIPPQVGKYKVYIIDEV 118 Query: 116 HRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQV 173 H + + +AFL +E+ FI ATTE ++ +LSR +++ K ++ DI + Sbjct: 119 HMLSTAAFNAFLKTLEEPPKHAIFILATTE--KHKIIPTILSRCQIFDFKRITINDIREY 176 Query: 174 LTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLK 233 L E Q I DE + IA+ +G R AL+ + + + + + + Sbjct: 177 LKYIAEQ-------QGIEAEDEALQIIAQKADGAMRDALSIFDRVVSFSGEKITRQATSE 229 Query: 234 PELLTEIAGERSARFDNKGDRFYDLISALHKSVR----GSAPDAALYWYARIITAGGDPL 289 + + ++ +L+ A + S+ G+ A L + R + +P Sbjct: 230 ILNVLDYEVYFKVTDLILDNKLPELLIAFNDSIAQGFDGNHFIAGLASHFRDLMVCKNPT 289 Query: 290 YV 291 + Sbjct: 290 TI 291 >UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clostridiales RepID=B0TAU1_HELMI Length = 606 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 73/312 (23%), Positives = 119/312 (38%), Gaps = 56/312 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L RP++ + +GQ+H+ + L AI + H+ + GP GTGKTT A+++A Sbjct: 3 YLALYREWRPQSFQELVGQEHV---SRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A GV EIRE E+ + G Sbjct: 60 KALNCSGHGPVRPCNDCLNCRAINTGASHDVLEIDAASNRGVDEIRELREQVKYAPQEGN 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +A L +E+ + F+ ATTE ++ + +LSR + + + Sbjct: 120 YKVYIIDEVHMLTTEAFNALLKTLEEPPANVIFVLATTE--VHKIPATILSRCQRFDFRR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L +I L + +I ET IA G R AL L+ A Sbjct: 178 LGVNEIVDRLERICRHH-------EIAASRETLSFIARKAEGGMRDALGILDQCVSYA-- 228 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + +T I G + + YD+ L + R S L +I Sbjct: 229 ----GNEIDSGDVTAILGAVA------DEILYDMTQGLAE-DRLSD---VLMQLNDLINR 274 Query: 285 GGDPLYVARRCL 296 G + + R L Sbjct: 275 GKEVRPLTRDLL 286 >UniRef50_D1VIN0 AAA ATPase central domain protein n=1 Tax=Frankia sp. EuI1c RepID=D1VIN0_9ACTO Length = 622 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 81/193 (41%), Positives = 114/193 (59%), Gaps = 1/193 (0%) Query: 231 VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLY 290 + LL + + R+D GD+ YD++SA KS+RG DA+L++ AR+I AG DP + Sbjct: 395 AVDLALLEQSINRAAVRYDRDGDQHYDVVSAFIKSMRGGDADASLHYLARMIEAGEDPRF 454 Query: 291 VARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY 350 +ARR + +ASED+G ADP A+ VA++A +G E A+AQA+++LA APKSNAV Sbjct: 455 IARRMIILASEDIGMADPGALGVAVSAAQALELIGLPEARLALAQAVIHLALAPKSNAVI 514 Query: 351 TAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI 410 A AA AD R VP HLR+A + + +G+G YRY HD A + Y P E+ Sbjct: 515 RAMDAATADVRAGKAGPVPRHLRDAHYQGARRLGHGDGYRYPHDYPEGVARQQ-YPPDEL 573 Query: 411 AQTRYYFPTNRGL 423 YY P + G Sbjct: 574 VGVDYYRPGDLGF 586 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 95/226 (42%), Positives = 134/226 (59%), Gaps = 31/226 (13%) Query: 17 AARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANA 76 A R+RP L + +GQ+HLL G PL R +E G S++LWGPPGTGKTTLA +++R Sbjct: 61 ADRLRPRGLDELVGQRHLLGPGSPLRRLVEGGGTTSVVLWGPPGTGKTTLAHIVSRATGR 120 Query: 77 DVERISAVTSGVKEIREAIERARQNRNAGR-----------------------------R 107 +SAVT+GVK++R I+ AR ++ R R Sbjct: 121 RFRELSAVTAGVKDVRAVIDEARDALSSSRSNQSRRMVREPGLFSDAAQAPGGEVPVDLR 180 Query: 108 TILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLST 167 T+LF+DEVHRF ++QQDA LP +E G IT + ATTENPSF + + LLSR+ ++ L L+ Sbjct: 181 TVLFIDEVHRFTRTQQDALLPAVERGWITLVAATTENPSFSVVAPLLSRSLLFTLTPLTD 240 Query: 168 EDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALN 213 +DI ++ +A+ D RGYGG+ + + D+ + L GDARRAL Sbjct: 241 DDIRALVRRALVD-PRGYGGR-VRIADDALEHLVRLAGGDARRALT 284 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 132/302 (43%), Gaps = 45/302 (14%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEVIA 71 +Q LA + RP+ A +GQ+H++ K L A++ G LH +L G G GKTT+A ++A Sbjct: 3 YQVLARKWRPKTFADLVGQEHVV---KALRNALDEGRLHHAYLLTGTRGVGKTTIARILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A +G+ IRE +E A+ AG+ Sbjct: 60 KSLNCENAVHGEPCGQCESCTQIDSGRYVDLLEIDAASNTGIDNIREVLENAQYAPTAGK 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +KS +A L +E+ + FI ATT+ ++ +LSR ++L++ Sbjct: 120 YKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTD--PHKVPITVLSRCLQFVLRN 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++T+ + + L ++ +++ + + + G R AL+ L+ M Sbjct: 178 MTTQQVAEHLAHVLDR-------ENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAMGSG 230 Query: 225 DDSGKRV---LKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 + + V + + + G+ + A S R D+AL A + Sbjct: 231 KVAEQDVRQMIGAVDKQYLFELLEGIINQNGEALLE--KAQEMSARAIGFDSALAELAML 288 Query: 282 IT 283 + Sbjct: 289 LQ 290 >UniRef50_Q3B0U5 DNA polymerase III, tau subunit n=14 Tax=Cyanobacteria RepID=Q3B0U5_SYNS9 Length = 625 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 77/327 (23%), Positives = 133/327 (40%), Gaps = 59/327 (18%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 +T+QPL + RP+ Q +GQ+ + A L A+ + + + + GP GTGKT+ A Sbjct: 2 SSTYQPLHHKYRPQRFDQLVGQEAITA---TLGNALTSNRIAPAYLFSGPRGTGKTSSAR 58 Query: 69 VIARYANAD---------------------------VERISAVTSGVKEIREAIERARQN 101 ++AR N +E +A +GV IRE IER+R Sbjct: 59 ILARSLNCQNSDGPTPEPCGTCDLCRTIASGTALDVIEIDAASNTGVDNIRELIERSRFA 118 Query: 102 RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARV 159 R + VDE H + + +A L +E+ + F+ ATT+ + +LSR + Sbjct: 119 PVQARWKVYVVDECHMLSTAAFNALLKTLEEPPPQVVFVLATTDPQ--RVLPTILSRCQR 176 Query: 160 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + + + + +EQ LT E + I + E +A+ G R A + L+ ++ Sbjct: 177 FDFRRIPLDALEQHLTWIAEQ-------ESIAIQPEAIHVVAQRSQGGLRDAESLLDQLS 229 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 + E +A +D G + AL +++ S P A L Sbjct: 230 LLPPPI-----------------EANAVWDLLGAVPEQELLALAQAMTSSEPVALLEATR 272 Query: 280 RIITAGGDPLYVARRCLAIASEDVGNA 306 ++ G DP V + + + V A Sbjct: 273 NLLDRGRDPGAVLQGLAGVLRDLVLMA 299 >UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobacteria RepID=Q31PS7_SYNE7 Length = 652 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 65/343 (18%), Positives = 136/343 (39%), Gaps = 60/343 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ A +GQ+ + + L +A+ + + + GP GTGKT+ A ++A Sbjct: 3 YEPLHHKYRPQCFADLVGQEAI---ARTLSQALAQQRIAPAYLFTGPRGTGKTSSARILA 59 Query: 72 RYANAD---------------------------VERISAVTSGVKEIREAIERARQNRNA 104 + N +E +A +GV IRE IERA+ Sbjct: 60 KSLNCQQSTVPTASPCGECEACRAIARGNALDVIEIDAASNTGVDNIRELIERAQFAPVQ 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 R + +DE H + + +A L +E+ + F+ ATT+ + ++SR + + Sbjct: 120 CRFKVYVIDECHMLSTAAFNALLKTLEEPPDRVVFVLATTD--PQRVLPTIISRCQRFDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + + + L + + I + +A+L G R A + L+ + + Sbjct: 178 RRIPLQAMTDHLQVIAQK-------ESIEIEPTAIALVAQLAQGGLRDAESLLDQLGLL- 229 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + PE + ++ G R + L +++ + P+A L +++ Sbjct: 230 ------PPPVTPEAVWDLLGAVPER----------QLLQLLEAIAANDPEALLTLIRQLL 273 Query: 283 TAGGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRV 324 G +PL V + A + + + P+ + + + Sbjct: 274 DRGREPLTVLQNLTAFSRDLLIARTAPQRRDLTTVTEATWQEL 316 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 123/321 (38%), Gaps = 56/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH-LHSMILWGPPGTGKTTLAEV 69 +Q L RP++ +GQ+H+ K L AI G H+ I GP GTGKT++A+V Sbjct: 1 MNYQALYRMFRPQSFQDVVGQEHVT---KTLRNAISKGKQSHAYIFSGPRGTGKTSIAKV 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A +GV EIR ++ + + Sbjct: 58 FAKAINCLNPQDGEPCNECAICKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + + +DEVH +A L +E+ FI ATTE ++ ++SRA+ + Sbjct: 118 SKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTE--PHKIPPTIISRAQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ TE I L E+ Q + +E IA+ G R AL+ ++ Sbjct: 176 KAIGTEQITDRLRFVAEE-------QQLDYDNEALEFIAKASEGGMRDALSIMDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L + ++ G ++ L K V A Y + I Sbjct: 228 -----GDEHLTLQDALDVTGS----------VDEAALNELFKDVIDGNVKNAFTRYHQFI 272 Query: 283 TAGGDPLYVARRCLAIASEDV 303 + G + + + + + Sbjct: 273 SEGKEVNRLINDMIYFVRDTI 293 >UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD56_9FIRM Length = 628 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 128/315 (40%), Gaps = 57/315 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L RP++ +GQ+H+ K L A+E+G + H+ + GP GTGKT+ A + Sbjct: 1 MSYVALYRTWRPQDFDGLVGQEHI---RKALTNALESGRISHAYLFTGPRGTGKTSTARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A G+ EIR+ E+ + Sbjct: 58 LAKALNCEKGPTPHPCNTCDHCREITEGTSADVIEIDAASNRGIDEIRKLREQVHFAPVS 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ + FI ATTE ++ + + SR + + Sbjct: 118 SRYKVYIIDEVHMITADAFNALLKTLEEPPEHVVFILATTE--PQKIPTTIHSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ +DI L + E G +I + R +A +G R A+ L+ + MA Sbjct: 176 RRVTVDDIAAHLQKVAE-------GSNINAEPDALRLMAIQADGGMRDAVGLLDQCSIMA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G D + AL + + AAL +++ Sbjct: 229 -------NPVTAETVRQVLGIAGR----------DTMRALVEKIGRRDLPAALDLLNQLM 271 Query: 283 TAGGDPLYVARRCLA 297 G D V L Sbjct: 272 DDGKDVTQVLTELLE 286 >UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Tax=Cyanobacteria RepID=Q8DJU0_THEEB Length = 603 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 138/358 (38%), Gaps = 68/358 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 T++PL + RP+ + +GQ + L +A+ + + + GP GTGKT+ A + Sbjct: 1 MTYEPLHHKYRPQRFSDLVGQGAI---ATTLTQALLKERIAPAYLFCGPRGTGKTSSARI 57 Query: 70 IARYANA---------------------------DVERISAVTSGVKEIREAIERARQNR 102 +A+ N +E +A +GV IRE IE+A+ Sbjct: 58 LAKSLNCLRSSKPTPDPCGQCEVCRQVANGTSLDVIEIDAASHTGVDNIRELIEKAQFAP 117 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVY 160 R + +DE H + S +A L +E+ + FI ATT+ + ++SR + + Sbjct: 118 VQCRYKVYVIDECHMLSVSAFNALLKTLEEPPPQVVFILATTD--PQRVLPTIISRCQRF 175 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 + + ++ L + + I + E +A+L G R A + L+ ++ Sbjct: 176 DFRRIPLGEMVAHLQNIADK-------EQIDIEPEALTLVAQLSQGGLRDAESLLDQLSL 228 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + E + ++ G + + L ++ + L + Sbjct: 229 Y-------PERITVEQVWQLTGAVPEQDLRQ----------LLGAIARRDAVSVLEHTRQ 271 Query: 281 IITAGGDPLYVARRCLAIASEDVGNAD--PRAMQVAIAAWDCFTRVGPAEGERAIAQA 336 ++ G DPL + + ++ D+ A P+ + + + + A+A+A Sbjct: 272 LLERGRDPLTILQNLASL-YRDLLLAKTVPQRRDLVALTAETWQAL------IALAEA 322 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 71/315 (22%), Positives = 124/315 (39%), Gaps = 56/315 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++ LA + RP++ A+ +GQ H+L A L A++ LH + G G GKTT+A + Sbjct: 1 MSYLVLARKWRPKSFAEMVGQGHVLQA---LTNALDQSRLHHAYLFTGTRGVGKTTVARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV + R+ +E Sbjct: 58 FAKALNCEHGISSTPCGVCSACVEIDQGRFVDLIEVDAASRTGVDDTRDLLENVAYAPVR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR I +DEVH F+KS +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKIYLIDEVHMFSKSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++L I+Q L ++ ++I IAE NG R AL+ L+ Sbjct: 176 RALPLSQIQQHLADVLQK-------ENIAFEPAALHLIAEAANGSMRDALSLLDQAIAFT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + +D+I AL++ + D + Sbjct: 229 GGK------------LDTVQVSQILGLSDHQIIWDMIDALYQ----QSADRLFALVDEAL 272 Query: 283 TAGGDPLYVARRCLA 297 +P + + + Sbjct: 273 DRAVEPAILLAQFIE 287 >UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PXF7_9SPHI Length = 596 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 118/306 (38%), Gaps = 57/306 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + F A + RP +GQQH+ L AI L + + GP G GKTT A + Sbjct: 2 DNFIVSARKYRPVTFDSVVGQQHITG---TLKNAIHNNQLAQAFLFCGPRGVGKTTCARI 58 Query: 70 IARYANADV--------------------------ERISAVTSGVKEIREAIERARQNRN 103 +A+ N + E +A + V +IR I++ R Sbjct: 59 LAKTINCEHITSEVEACGVCDSCKSFQNGNSFSIHELDAASNNSVDDIRNLIDQVRIPPQ 118 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYL 161 +G+ I +DEVH ++ +AFL +E+ FI ATTE ++ +LSR +++ Sbjct: 119 SGKYKIYIIDEVHMLSQQAFNAFLKTLEEPPSYAIFILATTE--KHKILPTILSRCQIFD 176 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 + ED+ + L E + + + IA+ +G R AL+ + + Sbjct: 177 FNRIRVEDMARHLAGIAEKEV-------VTYDLDGLHIIAQKADGGLRDALSMFDQIVSF 229 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 + S + V+ + + YD L ++ +L + ++ Sbjct: 230 SNKQISYQSVIDNLNILD----------------YDYYFKLTDAILQEEAAESLLIFDQV 273 Query: 282 ITAGGD 287 + G D Sbjct: 274 LNRGFD 279 >UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBX8_THET1 Length = 550 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 64/311 (20%), Positives = 128/311 (41%), Gaps = 55/311 (17%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIAR 72 Q L + R + + +GQ+H+ K L AI++G + H+ + GP GTGKT+ A ++A+ Sbjct: 3 QSLYRKYRSQTFDELVGQEHV---KKTLINAIKSGKIAHAYLFCGPRGTGKTSTARLLAK 59 Query: 73 YANAD------------------------VERISAVTSGVKEIREAIERARQNRNAGRRT 108 N +E +A V+++ + IER R Sbjct: 60 AVNCLSEGTKPCNSCSACLSINEGRAVDLIEIDAASRRKVEDVADIIERVNFAPAELRYK 119 Query: 109 ILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DEVH +A L +E+ F+ ATTE +++ ++SR + + + ++ Sbjct: 120 VYIIDEVHMLTTHAFNALLKTLEEPPAHAIFVLATTE--VWKVLPTIISRCQRFDFRRIT 177 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 +I + L E+ ++I + + AIA+ G R A++ L+ + Sbjct: 178 PREIVERLAFIAEN-------ENIKIQKDALIAIAKASTGSLRDAISILDQLTVY----- 225 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 G + E + ++ G D+++ ++ + AAL ++ G Sbjct: 226 -GDEEITLEHVKQLLGIVG----------EDVVANFVGAIIDNDTQAALSLLTQLSEHGV 274 Query: 287 DPLYVARRCLA 297 DP + ++ Sbjct: 275 DPRQFTQELVS 285 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 119/303 (39%), Gaps = 55/303 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ GQ+H++ L I+A + H+ + G GTGKTT+A+++A Sbjct: 3 YTALYRKFRPQEFEDVKGQEHIVT---TLKNQIKADRIGHAYLFCGTRGTGKTTIAKILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 R N + +E +A +GV IRE E G+ Sbjct: 60 RAVNCEHPVDGSPCNTCKTCRAINEGTSMNVIEIDAASNNGVDNIREIREEVAYRPTTGK 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y + Sbjct: 120 YKVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDFRR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++ + I L + M+ + + ++ R IA+ +G R AL+ L+ Sbjct: 178 ITADTIAARLQELMDKEGN-------DVEEKAIRYIAKAADGSMRDALSLLDQCIAFYLG 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + L E + E G + S + + + + II Sbjct: 231 EK-----LTYEKVLENLGA----------VDTQVFSRMLRQILQQDTAGTIKTLDEIIIQ 275 Query: 285 GGD 287 G + Sbjct: 276 GRE 278 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ LA + RP+ + + Q H+ + L AI + H++ L GP GTGKTT+A + Sbjct: 1 MSYLVLARKYRPQTFDEVVAQPHIT---ETLKNAINQERVAHALCLSGPRGTGKTTVARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N E A + V+++RE E + Sbjct: 58 LAKAMNCVNGPTPEPCGVCASCKEIAASNAVDVFEIDGASNNSVEQVRELRENVQYAPAL 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 G + +DEVH +++ +A L +E+ + FI ATTE S ++ +LSR + Y Sbjct: 118 GNYKVYIIDEVHMLSQAAFNALLKTLEEPPPHVMFILATTE--SHKIPVTILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K +S +DI L + G ++ + +++ A+A G R AL+ L+ + + Sbjct: 176 KRISLDDIVGHLAKLA-------GLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + S ++VL + +AG +S + AL +++ A L ++ Sbjct: 229 TGEASFEKVLD---ILGVAGRKS-------------LFALAQALLDRDVPACLTAVDQLY 272 Query: 283 TAGGDPLYVARRCLAI 298 G D V L Sbjct: 273 ARGYDLKQVMADLLDH 288 >UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 Tax=cellular organisms RepID=A3D5Q4_SHEB5 Length = 1147 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 72/318 (22%), Positives = 126/318 (39%), Gaps = 56/318 (17%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLA 67 S ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA Sbjct: 26 SSMSYQVLARKWRPATFDQMVGQSHVLHA---LTNALSQQRLHHAYLFTGTRGVGKTSLA 82 Query: 68 EVIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNR 102 + A+ N + +E +A + V + RE ++ + Sbjct: 83 RLFAKGLNCEQGVTATPCGACGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRP 142 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVY 160 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + Sbjct: 143 TRGRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQF 200 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 LKSL+ +I L + + E + +A+ NG R AL+ + Sbjct: 201 NLKSLTQGEIGTQLNHILTQ-------EQFPFDAEAIKLLAKAANGSMRDALSLTDQAIA 253 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 G + + + G + + AL K++ + ++ A+ Sbjct: 254 F------GGGNVMLTQVQTMLGSIDEQH----------VVALLKALTDADIGVLMHTCAQ 297 Query: 281 IITAGGDPLYVARRCLAI 298 ++ G D V R L + Sbjct: 298 VLAYGADAQEVLRSLLEL 315 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 89/418 (21%), Positives = 147/418 (35%), Gaps = 65/418 (15%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++ LA + RP++ +GQ+H+ + L AI+ G +H + G G GKT+ A + Sbjct: 1 MSYLVLARKYRPQSFDDLVGQEHV---SQTLGNAIKTGRVHHAFLFTGARGVGKTSAARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + E A +GV +IRE E R + Sbjct: 58 FAKALNCEQGLSPQPCNVCQSCREISAGQGLDVFEIDGASNTGVDDIRELRENIRYLPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R I +DEVH + + +A L +E+ FI ATTE ++ +LSR + + Sbjct: 118 SRYKIFIIDEVHMLSTNAFNALLKTLEEPPEHAKFIFATTE--PHKIPITILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + I L + + I + + + +A G R A +T + + Sbjct: 176 RKIPLPLIVARLKEIA-------AAEGISISERSLGLVARRGEGSMRDAQSTFDQVIAFC 228 Query: 223 EVDDSGKRV----------LKPELLTEIAGERSA-------RFDNKGDRFYDLISALHKS 265 V L + L + G S R D G F L ++ Sbjct: 229 GDAVGEDDVQGLLGMVDRRLLVDTLESLLGHDSRRLLHCVCRVDELGHSFRQFCRELVET 288 Query: 266 VRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS-EDVGNADPRAMQVAIAAWDCFTRV 324 +R + ++ A D L RR A ED+ A V + Sbjct: 289 LRSLVVLKVVPEPEALLDATPDELEELRRLSATVELEDLERA------VTVLVRTEAELA 342 Query: 325 GPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKE 382 G + A+ A++ LA P S + D + R + VP R P Sbjct: 343 GSSFPRLALEMALLRLAHLP-SGRDVATLVRQVEDLQRRLESGVPPAERAQPASYASS 399 >UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Bacilli RepID=Q1WSU3_LACS1 Length = 579 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 65/314 (20%), Positives = 123/314 (39%), Gaps = 56/314 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+ + K L AI H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVWRPQRFMDLVGQEMVT---KTLKNAIITHQTSHAYLFTGPRGTGKTSAAKI 57 Query: 70 IARYANADV-------------------------ERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A +GV+EIR+ ++ + Sbjct: 58 FAKAINCRFSKEGEPCNECETCKAITEGRLNDVIEIDAASNNGVEEIRDIRDKVKYAPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ + FI ATTE ++ + ++SR + + Sbjct: 118 ADYKVYIIDEVHMLSTGAFNALLKTLEEPPANVVFILATTE--PHKIPATIISRTQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ E I Q + ++ K ++ D+ + IA+ G R AL+ L+ + Sbjct: 176 KRITAESILQRMIYILDQK-------NVDYDDKALKVIAKAAEGGMRDALSLLDQVISF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + ++ + K V AL +I+ Sbjct: 228 -----GDNNVTLDNALLVTGSVT------QESLFNYL----KFVLSKDTTNALKEIQQIV 272 Query: 283 TAGGDPLYVARRCL 296 G D + + Sbjct: 273 EQGKDANRLIEDLI 286 >UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bacillus cereus group RepID=B7IZ38_BACC2 Length = 548 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 66/313 (21%), Positives = 130/313 (41%), Gaps = 56/313 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP N ++ IGQ H+ + + A++ H+ + GP GTGKTT+A++IA Sbjct: 2 YQALYRKYRPTNFSELIGQNHI---KQTIQNALKLAKFSHAYMFTGPRGTGKTTIAKLIA 58 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 N + +E +A +GV++IRE E+ G Sbjct: 59 TSLNCESLNNEGEPCNECSQCKAIRGNSHADVLEIDAASNNGVEQIREIREQVAYAPGTG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ + FI ATT+ ++ + ++SR + + + Sbjct: 119 KYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTD--VHKIPATIISRCQRFDFR 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + DI + L +++ + ++ + + L G R AL+ ++ A Sbjct: 177 RIGPRDIIERLRHVAIK-------EEVKIEEDALQLLGMLAQGGMRDALSLMDQTIAFAT 229 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + ++E+ G S ++ I L K L ++I Sbjct: 230 -----NETITKDDVSEVVGRISI------EKIEACIGDLLKG----NTIEILNLINQVIL 274 Query: 284 AGGDPLYVARRCL 296 G +P+Y+ + Sbjct: 275 NGKEPIYLLEDLI 287 >UniRef50_D1C546 DNA polymerase III, subunits gamma and tau n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C546_SPHTD Length = 589 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 54/315 (17%) Query: 14 QPLAARMRPENLA--QYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 Q L + RP + A +++GQ+H+ + L AI + H+ + GP GTGKT+ A ++ Sbjct: 16 QSLYRKYRPRSFAPGEFVGQEHI---ARTLRNAIVLDRVAHAYLFCGPRGTGKTSTARLL 72 Query: 71 ARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A GV +IR+ E+ + Sbjct: 73 AKAVNCLAPDPEARPCNACEACEAINAGTAVDIIEIDAASNRGVDDIRDLREKVKYAPTQ 132 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R +DE H+ + +AFL +E+ G + F+ ATTE +L + SR + + Sbjct: 133 LRVKFYIIDEAHQLTRDAFNAFLKTLEEPPGHVKFVLATTE--PDKLPDTIASRCQRFDF 190 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + D+ + L E + + DE R IA G R AL LE +A Sbjct: 191 RRFALSDVVEHLRAVCER-------EGMEAEDEALRLIARQATGSMRDALGLLEQLALFG 243 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E D GK V+ + + + G ++ DR L+ AL K A L A Sbjct: 244 ETVD-GKLVITADAVRRVTGM------SRSDRLVALVDALAK----KDAGAGLRVIAEAT 292 Query: 283 TAGGDPLYVARRCLA 297 +G D + R+ +A Sbjct: 293 ESGEDIHQLNRQLVA 307 >UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clostridium RepID=C9XIC8_CLODC Length = 545 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 122/316 (38%), Gaps = 56/316 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L RP+ IGQ H++ K L I + ++ H+ + G GTGKT+ A++ + Sbjct: 2 HKALYRAYRPQKFEDVIGQDHII---KTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFS 58 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 R N VE +A + V +IRE E + + + Sbjct: 59 RAVNCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH ++ +A L +E+ + FI ATTE ++ + +LSR + Y K Sbjct: 119 YKVYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTE--PHKIPATILSRCQRYDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++ +D+ + + ED + I + D+ IA G R AL+ L+ Sbjct: 177 VTVKDMTLRMKKICED-------EGIDIDDKALNLIARNSQGALRDALSILDQCMSF--- 226 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 G+ + + + E+ G + + + L + + +L + Sbjct: 227 ---GESKIDYKDVVELMGSVNI----------EQLFELSQCIVEQDTKKSLEILNEFVLW 273 Query: 285 GGDPLYVARRCLAIAS 300 G D + + Sbjct: 274 GKDIRNLINDLIDHFR 289 >UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM15_SYNFM Length = 602 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 79/389 (20%), Positives = 138/389 (35%), Gaps = 70/389 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ +A + RP+ + +GQ H+ + L AI + + HS + G G GKT++A + Sbjct: 1 MSYLVIARKWRPQTFEEVVGQPHVT---RTLQNAIRSSRIAHSYLFTGARGVGKTSIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E A G+ +RE E R Sbjct: 58 LAKALNCETGVTPTPCNVCSNCTEIRQGNAVDVLEIDGASNRGIDSVRELRETVRYRPAK 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 SRYKVYIIDEVHMLTTEAFNALLKTLEEPPEHVVFIFATTE--PHKIPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + + + L +D+ L + AIA +G R A + LE M + Sbjct: 176 RRIPSHMLVDHLRHIAAQ-------EDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 S + VL + + RS +V L I Sbjct: 229 RDGLSDEEVLD---VLGVIDRRSIHRTGT-------------AVLEGDVRTCLDVVEDIY 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPA-EGERAIAQAIVYLA 341 G D R+ + VA D R+ + ++ +A+A Sbjct: 273 RRGMDIRRFCRQLCDYFR--------NLLVVAFGEGDS-RRLDLPSDEKQLLAEAAGK-- 321 Query: 342 CAPKSNAVYTAFKAALADARERPDYDVPV 370 P+S +Y F+ L E +P Sbjct: 322 TTPES--LYLYFQTVLKSEEEIRRSTIPR 348 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 124/300 (41%), Gaps = 56/300 (18%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAE 68 + T+Q LA + RP+ + +GQ+H++ K L A++ G LH +L G G GKTT+A Sbjct: 29 NMTYQVLARKWRPKTFSDLVGQEHVV---KALQNALDEGRLHHAYLLTGTRGVGKTTIAR 85 Query: 69 VIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRN 103 ++A+ N + +E +A +G+ IRE +E A+ Sbjct: 86 ILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAPT 145 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 AG+ + +DEVH +KS +A L +E+ + FI ATT+ ++ +LSR ++ Sbjct: 146 AGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTD--PHKVPVTVLSRCLQFV 203 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 L++++ + + L ++ + I + + G R AL+ L+ + Sbjct: 204 LRNMTAQQVADHLAHVLD-------SEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIAL 256 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 + V R Y+L++ + +A L + Sbjct: 257 GSGKVAENDV------------RQMIGAVDKQYLYELLT----GIVNQDGEALLAKAQEM 300 >UniRef50_Q0ASK9 DNA polymerase III, tau subunit n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASK9_MARMM Length = 606 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 97/367 (26%), Positives = 149/367 (40%), Gaps = 62/367 (16%) Query: 1 MSNLSLDFSDNT--FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWG 57 M L L + T +Q LA + RP+ IGQ ++ + L A AG + H+ +L G Sbjct: 18 MPGLDLPATGPTPGYQVLARKYRPDTFEDLIGQDAMV---RTLTNAFAAGRIAHAYMLTG 74 Query: 58 PPGTGKTTLAEVIARYAN-------------------AD----------VERISAVTSGV 88 G GKTT A +IAR N D +E +A +GV Sbjct: 75 VRGVGKTTTARLIARALNFQTDGIDAPSMALGEKGRHCDAIGRSAHVDVMEMDAASRTGV 134 Query: 89 KEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPS 146 +IRE +E R + R + +DEVH + S +A L +E+ FI ATTE Sbjct: 135 GDIREILEGVRYAPVSARYKVYIIDEVHMLSTSAFNALLKTLEEPPEHAKFIFATTE--I 192 Query: 147 FELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNG 206 ++ +LSR + + LK + E + L + G + + + IA G Sbjct: 193 RKVPVTVLSRCQRFDLKRIDREVLTDHLDRIC-------GLEGASVERDGLSLIARAAEG 245 Query: 207 DARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSV 266 R AL+ L+ + D V P++ + AR ++ L +++ Sbjct: 246 SVRDALSLLDQAIV--QGSDEDGPVSAPQIRDMLGLADHAR----------VLDLLEQTL 293 Query: 267 RGSAPDAALYWYARIITAGGDPLYVARRCL--AIASEDVGNADPRAMQVAIAAWDCFTRV 324 G DA L + + AGGDP+ + R L A+ V A P A + AA V Sbjct: 294 TGKTADA-LAELSSLHDAGGDPVVITRDLLDYVHATARVKAAGPGA-DLGEAADTVARIV 351 Query: 325 GPAEGER 331 AEG+ Sbjct: 352 TLAEGQT 358 >UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N1K9_SLAHD Length = 807 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 69/317 (21%), Positives = 114/317 (35%), Gaps = 57/317 (17%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIAR 72 + L + RP+ +GQ H+ + L A++ H+ H+ + GP GTGKTT+A ++A+ Sbjct: 3 EALYRKYRPQTFDDVVGQTHV---ERTLKNALQQDHVSHAYLFCGPRGTGKTTMARLLAK 59 Query: 73 YANAD----------VERI---------------SAVTSGVKEIRE-AIERARQNRNAGR 106 + E +A +GV +RE I R + GR Sbjct: 60 ALLCEHGPTPSPDGTCEECQLIAEGAHPDVNELDAASRTGVDNVREEIIGRVQFAPTRGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH +A L +E+ + F+ TT+ ++ +LSR + + Sbjct: 120 YKIYIIDEVHMLTVPAFNALLKTLEEPPAHVVFVMCTTD--PQKIPETILSRCQRFDFHR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 LS E+I L +D+ E IA G R AL LE + Sbjct: 178 LSNEEIVSRLGAVCM-------AEDVPFEGEALDLIARRAQGGMRDALTALEQLIAF--- 227 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 G + ++ G +S + + A W A + Sbjct: 228 ---GAGNVTMDVANAALGSLDVND----------MSEIAGHIGRRDAAACFTWMAEYVET 274 Query: 285 GGDPLYVARRCLAIASE 301 G D AR + + Sbjct: 275 GADLAQFARDLASYVRD 291 >UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 Tax=Clostridiales RepID=A9KQC7_CLOPH Length = 522 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 126/328 (38%), Gaps = 63/328 (19%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L + RP+ GQ H++ L I+A + H+ + G GTGKTT+A++ Sbjct: 1 MSYMALYRKFRPDTFEDVKGQDHIVT---TLKNQIKAKRIGHAYLFCGTRGTGKTTVAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A +GV IRE +E + + Sbjct: 58 LAKTVNCEHPIDGNPCNECAMCKAIQSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G + +DEVH + +A L +E+ + FI ATTE ++ +LSR + Y Sbjct: 118 GNYKVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTE--VHKIPITILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ ++I + L E + I ++ R +A +G R AL+ L+ Sbjct: 176 RRVTIDEITKRLRVITEK-------EGIEAEEKALRYVARAADGSFRDALSLLDQCIAFY 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + D G ++ + L + +R + + +I Sbjct: 229 FGQSLTYDNV---------------LDALGTVDIEVFARLLRYIRKGSVTDCVAILEELI 273 Query: 283 TAGGDPL--------YVARRCLAIASED 302 G + Y+ LA SED Sbjct: 274 IQGRELTQFTIDFTWYLRNLLLAKTSED 301 >UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 Tax=Firmicutes RepID=D1BPK5_VEIPT Length = 895 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 75/327 (22%), Positives = 127/327 (38%), Gaps = 57/327 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ +GQ + L RAI + H+ + GP GTGKT++A++ A Sbjct: 3 YIALYRKYRPQTFTDVVGQHQV---SDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKIFA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 R N + +E +A G+ E+R E + GR Sbjct: 60 RAINCEHGPTDHPCNECSACRSILSGQSMDVLEIDAASNRGIDEVRALRESVKFMPVEGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + + +DE H +A L IE+ + FI ATTE +L ++SR + Y + Sbjct: 120 KKVFIIDEAHMLTTEAWNALLKTIEEPPAHVMFIFATTE--IEKLPVTIVSRCQRYTFRR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++++DI Q L+ E + L + IA +G R AL+ L+ A MA Sbjct: 178 ITSDDIAQRLSYVAEK-------EGFDLDSAAAQLIAVHADGGLRDALSILDQCAGMATG 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + P+++ E+ G S + I ++R L + + Sbjct: 231 S------ITPQVVEELIGLVSKEW----------IIHFLDALRNGDGPKVLSYVHDALAE 274 Query: 285 GGDPLYVARRCLAIA-SEDVGNADPRA 310 G D + + + VG P A Sbjct: 275 GRDATQIMEALIQHVRALLVGKVAPDA 301 >UniRef50_A9BDA2 DNA polymerase, gamma and tau subunits n=2 Tax=cellular organisms RepID=A9BDA2_PROM4 Length = 578 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 71/350 (20%), Positives = 136/350 (38%), Gaps = 65/350 (18%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 NT+ PL + RP++ +GQ+ + L +A+ + + + GP GTGKT+ A Sbjct: 2 SNTYAPLHNKYRPQSFDDLVGQKVI---ASTLKQALLTNRIAPAYLFCGPRGTGKTSSAR 58 Query: 69 VIARYANA---------------------------DVERISAVTSGVKEIREAIERARQN 101 ++AR N +E +A +GV IR+ IE+++ Sbjct: 59 ILARSLNCLNVEEPTINPCCQCNLCQTISAGNALDVIEIDAASNTGVDNIRDLIEKSKFA 118 Query: 102 RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARV 159 R I +DE H + + +A L +E+ + FI ATT+ L ++SR + Sbjct: 119 PVIARWKIYVIDECHMLSAAAFNALLKTLEEPPSRVVFILATTD--PQRLLPTIISRCQR 176 Query: 160 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + + D+ L + ++I + E +A G R A + L+ ++ Sbjct: 177 FDFSQIELNDLINHLQEIA-------NKEEIGIEKEAINLVARRSQGGLRDAQSMLDQLS 229 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 + + + + ++ GE S ++ DL AL K P L Sbjct: 230 LL-------PQPITVNAVLDLLGEVS------EEKLLDLAMALTK----KDPLNLLLICR 272 Query: 280 RIITAGGDPLYVARRCLAIASEDVGNAD-----PRAMQVAIAAWDCFTRV 324 +I G DP+ + + +I D+ + P ++ + + + Sbjct: 273 ELINNGKDPMGILQGLASILR-DLVLKNAAPDYPDLCSISQESHQKLSEI 321 >UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0B1_9SPHI Length = 575 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 121/304 (39%), Gaps = 56/304 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP +GQ H+ L AI++ L + + GP G GKTT A ++A Sbjct: 4 FVVSARKYRPATFDTVVGQSHITT---TLKNAIKSNQLAQAFLFCGPRGVGKTTCARILA 60 Query: 72 RYANA-----DVERI---------------------SAVTSGVKEIREAIERARQNRNAG 105 + N D E +A ++ V +IR +++ R +G Sbjct: 61 KTINCLTPTEDFEACGTCESCVSFQNQGSMNVYELDAASSNSVDDIRNLVDQVRYPPQSG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 +R + +DEVH + S +AFL +E+ + FI ATTE ++ +LSR +++ K Sbjct: 121 KRKVYIIDEVHMLSNSAFNAFLKTLEEPPEYVIFILATTE--KHKIIPTILSRCQIFDFK 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + +D+ L + ++I + IA+ +G R AL+ +++ Sbjct: 179 RIEVKDMSGHLANIAQK-------EEIEAEQDALDLIAQKADGGLRDALSLFDLITTF-- 229 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 S R + + + + +D + ++ L ++ I+ Sbjct: 230 ---SADRHITYQSVVKNLH----------ILDHDYYFKITDALLAQDMPLVLLYFDEILR 276 Query: 284 AGGD 287 G D Sbjct: 277 KGFD 280 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 45/305 (14%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAE 68 ++ LA + RP+ A+ +GQ+H++ + L A+++G +H + G G GKTT+A Sbjct: 99 PMSYLVLARKWRPKRFAELVGQEHVV---RALSNALDSGRVHHAFLFTGTRGVGKTTIAR 155 Query: 69 VIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRN 103 + A+ N + +E +A +GV ++RE IE A+ + Sbjct: 156 IFAKSLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPS 215 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 G+ + +DEVH +K+ +A L +E+ + F+ ATT+ +L +LSR + Sbjct: 216 RGKFKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFN 273 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 LK L + I+ +T+ + ++I +++ +G R L+ L+ Sbjct: 274 LKRLDEDQIQGQMTRIL-------AAEEIESDPSAIVQLSKAADGSLRDGLSLLDQAIAY 326 Query: 222 AEV---DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWY 278 A +D + +L T++ A D G + +++AL + L Sbjct: 327 AGGALREDVVRTMLGTVDRTQVGAMLQALSDGDGAQLLKVVAALAEF--SPDWSGVLEAL 384 Query: 279 ARIIT 283 A + Sbjct: 385 AEALH 389 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 70/308 (22%), Positives = 120/308 (38%), Gaps = 56/308 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L R RPE A +GQ+H+ + L RA+ +G + H+ + GP GTGKT+ A+++A Sbjct: 3 YVALYRRWRPERFADLVGQEHI---SRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKILA 59 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 R N E +A G+ EIR+ E + G Sbjct: 60 RALNCAEGPTLTPCGHCDSCRSISDGSSMDVFEIDAASNRGIDEIRDLRESVKFAPTEGL 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH +A L +E+ + FI ATTE ++ + + SR + Y Sbjct: 120 YKIYIIDEVHMLTTEAFNALLKTLEEPPERVIFILATTE--PHKVPATIQSRCQRYDFHR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++ +I L ++ I ++ IA +G R AL+ L+ +AE Sbjct: 178 ITVTEICDRLIYVCKE-------SGIEAEEDALGIIAVQADGGMRDALSILDQCTALAEG 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 L E + E G + I + + + A + ++++ Sbjct: 231 ------TLTAERVQEALGLVGRAW----------IRQMAEQIAARDAAALITQLSQLLQN 274 Query: 285 GGDPLYVA 292 G + V Sbjct: 275 GRELRQVL 282 >UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 Tax=Clostridia RepID=C7HNJ4_9THEO Length = 394 Score = 267 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 63/319 (19%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP++ + +GQ+H++ K L I+ + H+ + G GTGKT++A++ A Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIV---KTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFA 58 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A + V ++RE E + + Sbjct: 59 KAVNCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE +L +LSR + + K Sbjct: 119 YKVYIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTE--PDKLPDTILSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + T I Q L + D I + ++ + IA NG R A++ LE A E Sbjct: 177 IPTRLIAQNLDRICND-------SGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEG 229 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 ++ E + E+ G + +++ +L + A+L +I++ Sbjct: 230 ------LITYEDVCEMLGVAN----------DEVLFSLLDYMNAKDVAASLKQLDKILSY 273 Query: 285 GGD-------PLYVARRCL 296 G D Y+ R + Sbjct: 274 GIDVGNFLKSLTYILRDMV 292 >UniRef50_B1WS93 DNA polymerase III gamma and tau subunits n=6 Tax=Cyanobacteria RepID=B1WS93_CYAA5 Length = 683 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 59/318 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++++PL + RP+ A +GQ+ + L AI + + + + GP GTGKT+ A + Sbjct: 2 SSYEPLHHKYRPQTFADLVGQEAI---ATTLSNAIASQRIAPAYLFTGPRGTGKTSSARI 58 Query: 70 IARYANA---------------------------DVERISAVTSGVKEIREAIERARQNR 102 +A+ N +E +A +GV IRE IER++ Sbjct: 59 LAKSLNCLAVKVPTASPCGQCEVCRAIARGSALDVIEIDAASNTGVDNIREIIERSQFAP 118 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVY 160 R + +DE H + + +A L +E+ + F+ ATT+ + ++SR + + Sbjct: 119 VQCRYKVYVIDECHMLSVAAFNALLKTLEEPPERVIFVLATTD--PQRVLPTIISRCQRF 176 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 + + E + + LT + ++I + E +A++ NG R A E + D Sbjct: 177 DYRRIPLEAMVEHLTIIAQK-------ENIEIEAEALTLVAQIANGGLRDA----ESLLD 225 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + G + PE + ++ G R DL+S L K++ + P+ + + Sbjct: 226 QLSLLSGG---ITPEKVWDLVGAVPER---------DLLS-LLKAINSNNPELVIESCRK 272 Query: 281 IITAGGDPLYVARRCLAI 298 ++ G +PL V + A Sbjct: 273 LMDRGREPLVVLQNLAAF 290 >UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W8W3_ATOPD Length = 755 Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 57/318 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ Q +GQ+H++ L RA+ L H+ + GP GTGKTT+A ++A Sbjct: 1 MESLYTKYRPQTFEQVVGQKHVVG---TLKRAVLEQKLSHAYLFCGPRGTGKTTMARLLA 57 Query: 72 RYANAD-------------------------VERISAVTSGVKEIRE-AIERARQNRNAG 105 + E +A +GV +RE I RA G Sbjct: 58 KAILCHEAPGHLPDGTCEDCQLIAAGQHPDVFEIDAASNTGVDNVREEIISRASYAPVCG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ +TFI TT+ ++ + +LSR + + + Sbjct: 118 KGKVYIIDEVHMLTSAAFNALLKTLEEPPSHVTFIMCTTD--PQKILATILSRVQRFDFR 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 S++ +++ + L ++ + D I G R AL++LE ++ Sbjct: 176 SIAADEMAEHLISVCKN-------EGFTYEDAAIDLIVRYARGGMRDALSSLEQLSVY-- 226 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 G V+ + + ++ G+ S LI++ ++ + + Sbjct: 227 ----GGGVISEQTVRDVLGQSSG----------SLINSAALALAQRDISSLFTTVNTLFE 272 Query: 284 AGGDPLYVARRCLAIASE 301 G D L R A + Sbjct: 273 GGKDLLQFTRELAAHVRD 290 >UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Bacteroidales RepID=A6LDQ5_PARD8 Length = 586 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 120/332 (36%), Gaps = 57/332 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + + A + RP +GQ+ L L AI++ L H+ + GP G GKT+ A + Sbjct: 2 DNYIVSARKYRPSTFRSVVGQKSLTT---TLKNAIQSNKLAHAYLFCGPRGVGKTSCARI 58 Query: 70 IARYANA-----------DVERI---------------SAVTSGVKEIREAIERARQNRN 103 A+ N E +A + V +IR I++ R Sbjct: 59 FAKTINCLNPTADGEACNACESCRAFNEQRSYNIHELDAASNNSVDDIRTLIDQVRIPPP 118 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 G+ + +DEVH + +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 119 IGKYKVFIIDEVHMLTTAAFNAFLKTLEEPPHHALFILATTE--KHKVLPTILSRCQIYD 176 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 +S D+ + L + + E IA+ +G R AL+ + + Sbjct: 177 FSRISIADMVEHLQYV-------SSQEGVTAEPEALNVIAQKADGGMRDALSIFDQVVSF 229 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 + + + V+ + + Y+ L ++ A+L I Sbjct: 230 TNGNITYQAVIDNLNVLD----------------YEYYFRLTDAILSGNVRASLLILNEI 273 Query: 282 ITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + G D + + + D + + Sbjct: 274 LGKGFDGQNIITGLAGHFRDLLVCRDESTLVL 305 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 46/264 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + LA + RP+ +GQQH++ L AI + H+ + GP G GKT++A ++A Sbjct: 3 YLVLARKWRPQVFEDVVGQQHVVQ---TLKNAIRQERIAHAFLFSGPRGVGKTSIARILA 59 Query: 72 RYANADV-------------------------ERISAVTSGVKEIREAIERARQNRNAGR 106 + N + E A G+ EIRE ER R + R Sbjct: 60 KAINCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVSCR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE + ++ + +LSR + + + Sbjct: 120 YKVYIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTE--THKVPATILSRCQCFEFRR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 LS I + L + E + I + D IAE +G R + + + + A Sbjct: 178 LSLRQIAEQLRKIAE-------TEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYAGT 230 Query: 225 DDSGKRVLKPELLTEIAGERSARF 248 ++ E + E+ G RF Sbjct: 231 ------AIEDEAVEELLGRTDRRF 248 >UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 Tax=Shewanella oneidensis RepID=Q8EFG0_SHEON Length = 1002 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHA---LTNALTQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCETGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 176 KSLTQQEIGTQLQHILTQ-------EQLPFEHEALGLLAKSANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + L K++ + A + A+++ Sbjct: 228 -----GGGTVMLNQVQSMLGSIDEQH----------VLGLLKALTDADIGALMQSCAQVL 272 Query: 283 TAGGDPLYVARRCLAI 298 G D V R L + Sbjct: 273 AYGADAQEVLRSLLEL 288 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 76/316 (24%), Positives = 129/316 (40%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLHA---LTNALTQQRLHHAYLFSGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + + Sbjct: 58 FAKGLNCEQGVTATPCGQCSACVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQRLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I LT + + + +A+ NG R AL+ + Sbjct: 176 KSLTQDEISDQLTNVLT-------AESLEFEATALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G +K EL+ + G + L+ AL K+ A + A ++ Sbjct: 228 -----GAGQVKLELVQTMLGSI------DEKQVIALLEALAKA----DVMALMQVSAGVL 272 Query: 283 TAGGDPLYVARRCLAI 298 + G +P V R L + Sbjct: 273 SFGAEPEEVLRSLLEL 288 >UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 Tax=Thermoanaerobacter RepID=B0K0Z9_THEPX Length = 518 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 63/319 (19%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP++ + +GQ+H++ K L I+ + H+ + G GTGKT++A++ A Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIV---KTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFA 58 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A + V ++RE E + + Sbjct: 59 KAVNCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE +L +LSR + + K Sbjct: 119 YKVYIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTE--PDKLPDTILSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + T I Q L + D I + ++ + IA NG R A++ LE A E Sbjct: 177 IPTRLIAQNLDRICND-------SGIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEG 229 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 ++ E + E+ G + +++ +L + A+L +I++ Sbjct: 230 ------LITYEDVCEMLGVAN----------DEVLFSLLDYMNAKDVAASLKQLDKILSY 273 Query: 285 GGD-------PLYVARRCL 296 G D Y+ R + Sbjct: 274 GIDVGNFLKSLTYILRDMV 292 >UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W2_EUBE2 Length = 561 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 122/310 (39%), Gaps = 55/310 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L + RP+N GQ ++ L I A + H+ + G GTGKT++A++ Sbjct: 17 MSYQALYRKWRPDNFNDVKGQDTIVT---TLRNQINADRIGHAYLFCGTRGTGKTSVAKI 73 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV IR+ E + + Sbjct: 74 FAKAVNCEHPVDGNPCGECPTCKAIAAGTSMNVIEIDAASNNGVDNIRQIREEVQYSPTE 133 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + +A L +E+ + FI ATTE ++ +LSR + Y Sbjct: 134 GRFKVYIIDEVHMLSIGAFNALLKTLEEPPAYVIFILATTE--VAKIPITILSRCQRYDF 191 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++ E I L++ M+ + + + D+ + +A+ +G R AL+ L+ Sbjct: 192 HRITIETIAGRLSELMK-------AEGLNVEDKAIKYVAKAADGSMRDALSLLDQCLAFY 244 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 D LK E + ++ G + S + ++ + +I Sbjct: 245 LGKD-----LKYENVLDVLGAVDTA----------VFSKMLSTILSGDVAVCMSLMEDLI 289 Query: 283 TAGGDPLYVA 292 G D Sbjct: 290 MQGRDLSQFV 299 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 67/303 (22%), Positives = 126/303 (41%), Gaps = 56/303 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP+ A +GQ+H++ + L A++ LH +L G G GKTT+A + Sbjct: 1 MSYQVLARKWRPKRFADLVGQEHVV---RALSNALKEQRLHHAYLLTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A +G+ IRE +E A+ Sbjct: 58 LAKSLNCETGTTAEPCGECQACRQIDSGRFVDLLEIDAASNTGIDNIREVLENAQYAPTM 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +KS +A L +E+ G + FI ATT+ ++ +LSR + L Sbjct: 118 GRFKVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTD--PQKVPVTVLSRCLQFSL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++++ + + L ++ + I + +G R A + L+ Sbjct: 176 RNMTPQQVSSHLAHMLDI-------EGIHYEAPALALLGRAASGSMRDAQSLLDQAIAY- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G +K + + + G R+ + L +++ S A + R+ Sbjct: 228 -----GLGEVKEDGVRAMLGAVDRRY----------LFTLLQALAASDGPALMAEADRLA 272 Query: 283 TAG 285 G Sbjct: 273 ERG 275 >UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 Tax=Gammaproteobacteria RepID=Q0HHZ2_SHESM Length = 1071 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHA---LTNALTQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 176 KSLTQQEIGTQLQHILTQ-------EQLPFEHEALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + L K++ + + A+++ Sbjct: 228 -----GGGTVMLNQVQSMLGSIDEQH----------VLRLLKALTDADIGVLMQSCAQVL 272 Query: 283 TAGGDPLYVARRCLAI 298 G D V R L + Sbjct: 273 AYGADAQEVLRSLLEL 288 >UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMH2_MOOTA Length = 589 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 123/342 (35%), Gaps = 56/342 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 +Q L + RP A+ +GQ+H+ + L A+ G L H+ + GP GTGKT+ A+++ Sbjct: 3 QYQALYRQWRPRTFAEVVGQEHIT---RTLRNALRTGRLVHAYLFCGPRGTGKTSTAKIL 59 Query: 71 ARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAG 105 AR N +E +A G+ EIR IE+ G Sbjct: 60 ARAINCLAPREGEPCNECANCRRILAGNSLDVLEMDAASNRGIDEIRNLIEKIPLGPVEG 119 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH + +A L +E+ FI ATTE ++ +LSR + + Sbjct: 120 RYKVYIIDEVHMLTQEAFNALLKTLEEPPAHAVFILATTE--PRKVLPTILSRCQRFDFH 177 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 L+ + I L + + + ++ G R AL+ L+ + Sbjct: 178 PLTVQAIAGRLQEVA-------AANGVEIEPGALSLLSRKAAGGLRDALSLLDQILASGT 230 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + G D + AL ++ L + + Sbjct: 231 RG-----PVTAGQVAVTLGTARL----------DTLLALTDALATGDGAGVLNLVDKALA 275 Query: 284 AGGDPLYVARRCLAIASEDVGN-ADPRAMQVAIAAWDCFTRV 324 +G +P + L + DP A + + +V Sbjct: 276 SGIEPRRLLEDLLDHTRNLLLLKVDPGAGSLTGLLPEEVEQV 317 >UniRef50_C2GHX2 Crossover junction endodeoxyribonuclease n=4 Tax=Actinomycetales RepID=C2GHX2_9CORY Length = 574 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 88/215 (40%), Positives = 119/215 (55%), Gaps = 1/215 (0%) Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 S R++ E L E + R+D GD+ YD+ISA KSVRGS DAAL++ AR+I G Sbjct: 360 SPTRIITLETLEETINKAVVRYDRDGDQHYDIISAFIKSVRGSDVDAALHYLARMIEGGE 419 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 DP ++ARR + +ASED+G ADP A+ A+AA +G EG ++AQA V+LA APKS Sbjct: 420 DPRFIARRLIILASEDIGMADPTALSTAVAAAQAVALIGMPEGRLSLAQATVHLALAPKS 479 Query: 347 NAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYF 406 N++ TA ALAD R+ VP HLR+ + K +G Y Y HD+ + Y Sbjct: 480 NSIITAIDNALADVRKGKSGPVPRHLRDGHYEGAKRVGAAIGYTYPHDDPRGIVT-QRYM 538 Query: 407 PPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441 P + YY PT+ G E I A L + Sbjct: 539 PETLDGATYYQPTSHGREANIQGFAANLRSIVRGG 573 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 105/222 (47%), Positives = 147/222 (66%), Gaps = 2/222 (0%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 F PLA RMRP +L + +GQQHLLA GKPL R IE S+IL+GPPGTGKTT+A Sbjct: 21 FHPGGHAPLAVRMRPRSLDEVVGQQHLLAPGKPLRRLIEGDGEASVILYGPPGTGKTTIA 80 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFL 127 +I+ +SA+ SGVKE+R I+ AR+ G RT+LF+DEVHRF+K+QQDA L Sbjct: 81 SLISVATGNRFVGLSALDSGVKEVRAVIDTARKKLIEGTRTVLFIDEVHRFSKTQQDALL 140 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 +E+ + + ATTENPSF +N+ LLSR+ + L+SL ED++ V+ +A+ED+ RG+GG Sbjct: 141 AAVENRIVLLVAATTENPSFAVNAPLLSRSLLLQLESLGPEDLKTVVLRALEDE-RGFGG 199 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK 229 + + + D+ + L GDARRAL +E A+ A D+ + Sbjct: 200 E-VGITDDALDQLVTLAGGDARRALTYVEAAAEGARSIDAER 240 >UniRef50_B0VRL4 DNA polymerase III, tau and gamma subunits (DNA elongation factor III) n=9 Tax=Acinetobacter RepID=B0VRL4_ACIBS Length = 682 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 52/299 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEVIA 71 +Q LA + RP N + +GQ H+ + L A+E+G LH + G G GKTT+A ++A Sbjct: 2 YQVLARKYRPRNFNELVGQNHV---SRALSSALESGRLHHAYLFTGTRGVGKTTIARILA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A + V++ RE ++ GR Sbjct: 59 KCLNCETGVTSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGR 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + F+ ATT+ +L ++SR + L+ Sbjct: 119 FKVYLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTD--PQKLPITVISRCLQFTLRP 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L+ ++I + L +E + I + IAE G R AL+ + Sbjct: 177 LAVDEITKHLGAILEK-------EQIAADQDAIWQIAESAQGSLRDALSLTDQAIAY--- 226 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 G+ + + + E+ G D YDLI A+H++ R L + + + Sbjct: 227 ---GQGAVHHQDVKEMLG----LIDRT--IIYDLILAVHQNQREKVSQLLLQFRYQALD 276 >UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 Tax=Proteobacteria RepID=A0KY06_SHESA Length = 1040 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHA---LTNALTQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPKHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 176 KSLTQQEIGTQLQHILTQ-------EQLPFEHEALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + L K++ + + A+++ Sbjct: 228 -----GGGTVMLNQVQSMLGSIDEQH----------VLRLLKALTDADIGVLMQSCAQVL 272 Query: 283 TAGGDPLYVARRCLAI 298 G D V R L + Sbjct: 273 AYGADAQEVLRSLLEL 288 >UniRef50_C7PSN6 DNA polymerase III, subunits gamma and tau n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSN6_CHIPD Length = 634 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 69/304 (22%), Positives = 120/304 (39%), Gaps = 57/304 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP+N + +GQ H+ L AI L H+ + GP G GKTT A ++A Sbjct: 4 FIVSARKYRPQNFSTVVGQSHITT---TLKNAIRNSQLAHAFLFCGPRGVGKTTCARILA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N + E +A + V +IR +E+ R AG Sbjct: 61 KTINCENLQPDGEACNQCHSCTSFNEGSSFNIHELDAASNNSVDDIRTLVEQVRFAPQAG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 + I +DEVH + S +AFL +E+ FI ATTE ++ +LSR +++ K Sbjct: 121 KYKIYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTE--KHKILPTILSRCQIFDFK 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 ++ +D L + + I + +A+ +G R +L+TL+ + Sbjct: 179 RITIQDTVDHLQEIC-------SKEHIQAETDALHLVAQKTDGCMRDSLSTLDKIVSFTG 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + L+ + + YD + +V AL + I+ Sbjct: 232 GHLTYQNTLEHLNILD----------------YDYFFRVMDTVLQQDVATALLIFDEILQ 275 Query: 284 AGGD 287 G + Sbjct: 276 KGFE 279 >UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridium RepID=B8I549_CLOCE Length = 562 Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 121/314 (38%), Gaps = 56/314 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L + RP + Q+H++ + + +++G + H+ + G GTGKTT+A++ Sbjct: 1 MSYTALYRKWRPLVFEDVVEQEHVV---RTIKNTVKSGRIAHAYLFCGTRGTGKTTMAKI 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 AR N VE +A + V +RE + + Sbjct: 58 FARAINCINPKDGNPCNECEVCRGILDESILDVVEIDAASNNSVDNVREIRDEVVYAPSQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + +A L +E+ G + FI ATT+ +L + +LSR + + Sbjct: 118 ARYKVYIIDEVHMLSSGAFNALLKTLEEPPGHVVFILATTD--PHKLPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ I + + + I + D+ IA L +G R AL+ L+ Sbjct: 176 KKITPAGIAERVKLIAQ-------ASGINIDDDGALLIARLADGALRDALSILDQCIA-- 226 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + + G S D IS + ++ + + + Sbjct: 227 ----EGSTTITYQNVLDAIGIVS----------DDFISEIVDNIESKNVEGLVASVEMLS 272 Query: 283 TAGGDPLYVARRCL 296 G D L A + Sbjct: 273 AEGRDILRFASDLV 286 >UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR18_9SYNE Length = 745 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 75/378 (19%), Positives = 146/378 (38%), Gaps = 71/378 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ +Q +GQ + + L A+E + + + GP GTGKT+ A ++A Sbjct: 2 YEPLHHKYRPQTFSQLVGQDAI---AQTLTHALEQKRIAPAYLFCGPRGTGKTSSARILA 58 Query: 72 RYANA---------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 + N VE +A +GV IRE IER++ Sbjct: 59 KSLNCLSSEVPTAQPCGQCDVCQAVIQGIALDVVEIDAASNTGVDNIRELIERSQFAPVQ 118 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + + +A L +E+ + F+ ATT+ + ++SR + + Sbjct: 119 CRYKLYVLDEVHMLSTAAFNALLKTLEEPPSRVVFVLATTDPQ--RVLPTIISRCQRFDF 176 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + + + L+ + I + + +A++ G R A + L+ ++ A Sbjct: 177 RRIPLPSMIKHLSYI-------SAEEAIQIEPSAIQLVAQISQGGLRDAESLLDQLSLQA 229 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G R DL++ L +++ A L ++ Sbjct: 230 -------NKITVETVWDLVGAVPER---------DLLN-LVRAIAADDSTALLERVRHLM 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNAD--PRAMQVAIAAWDCFTRVGPAEGERAIAQ---AI 337 G +PL V + + D+ A P+ + + + + AQ A Sbjct: 273 DKGREPLIVLQSLVGF-YRDLLIAKRAPKRVDLVAITSPTWAEM------IPFAQKLSAA 325 Query: 338 VYLACAPKSNAVYTAFKA 355 LA K + K Sbjct: 326 ALLASQQKLQSAEVQIKN 343 >UniRef50_B2URG8 DNA polymerase III, subunits gamma and tau n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URG8_AKKM8 Length = 732 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 75/329 (22%), Positives = 125/329 (37%), Gaps = 57/329 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q A + RP +GQ H++ + L AIE L H+ + GP GTGKT+ A + Sbjct: 1 MSYQVFARKYRPLTFDDVLGQDHVV---RTLKNAIEHNRLAHAYLFVGPRGTGKTSTARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E A G+ IR+ + R + Sbjct: 58 FAKALNCSGGPKVDFDPHEDICEEIAEGRSLDVLEIDGASNRGIDHIRDLRDNVRFAPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 G I+++DEVH K +A L +E+ + FI ATTE ++ +LSR + + L Sbjct: 118 GNFRIVYIDEVHMLTKESFNALLKTLEEPPPHVKFIFATTE--PHKILPTILSRCQRFDL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + +E I + L + + L E A+A++ +G R A + L+ + Sbjct: 176 RPIPSEIIAEHLLHIA-------SAEGVSLSREAAFAVAKVADGGMRDAQSMLDQLVSFC 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 ++VL +T A AL + + L+ Sbjct: 229 GDHIEEQQVLHIFGITSRETVAHAL-------------AL---ILNKELPSLLHLLHEQA 272 Query: 283 TAGGDPLYVARRCLAIASE-DVGNADPRA 310 AG D ++ E V DP A Sbjct: 273 EAGRDMSQFLSEIISAVREILVSKVDPEA 301 >UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A8S0_CARHZ Length = 511 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 123/312 (39%), Gaps = 57/312 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ ++ +GQ+ ++ K L A+ + H+ + GP GTGKTT A+V+A Sbjct: 2 YLALYRKWRPKTFSEIVGQETIV---KILKNAVATMQVAHAYLFSGPRGTGKTTTAKVLA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + E +A G+ EIRE E + G+ Sbjct: 59 KAVNCEHPVEGEPCNQCPSCIGINNQSLLNVFEIDAASNRGIDEIRELRESIKLVPAQGK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +A L +E+ + FI ATTE ++ ++SR + + K Sbjct: 119 YKVYIIDEVHMLTNEAFNALLKTLEEPPEHVIFILATTE--FNKVPVTIVSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +ST+ I + L E + + E IAE G R AL+ ++ + Sbjct: 177 ISTKTIWEHLKNIAEK-------EKLQYEAEALHLIAEASEGGLRDALSLMDQILVF--- 226 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + E ++ G S R I L ++R + + A ++ Sbjct: 227 ----NPKITVEDTLKVLGFVSWRK----------ILELISAIRENNQLKIINEIAEVVER 272 Query: 285 GGDPLYVARRCL 296 G D ++ L Sbjct: 273 GLDVKLFVQQIL 284 >UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 Tax=Thermoanaerobacterales RepID=C6PF43_CLOTS Length = 533 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 66/314 (21%), Positives = 127/314 (40%), Gaps = 57/314 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP N ++ +GQ H++ + L I+ G + H+ + G GTGKT++A++ A Sbjct: 2 YQSLYRKYRPRNFSEVLGQNHIV---RTLKNQIKTGRIGHAYLFCGTRGTGKTSVAKIFA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A + V ++RE + + + Sbjct: 59 KAVNCPNSVEGEPCNRCQICESANNNSLIDIIEIDAASNNSVDDVRELRDNIIYAPSICK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + S +A L +E+ FI ATTE ++ + +LSR + + K Sbjct: 119 YKVYIIDEVHMLSGSAFNALLKTLEEPPSHAIFILATTE--PNKIPATILSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + ++ I Q + + +D +I + + IA NG R A++ LE Sbjct: 177 IPSKVISQNIGKIAKD-------SNINIENRAIAMIARHGNGSMRDAISILEQCVSY--- 226 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 VL + + +I G + D + L K + + +++ Sbjct: 227 ----NDVLTYDDVCDILGTVN----------DDTLYTLVKRINDRNAKEVINQIDKLMLY 272 Query: 285 GGDPLYVARRCLAI 298 G D + + L+ Sbjct: 273 GIDVSNLIKAMLSF 286 >UniRef50_Q0C591 DNA polymerase III, subunits gamma and tau n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C591_HYPNA Length = 578 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 89/368 (24%), Positives = 151/368 (41%), Gaps = 78/368 (21%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 T++ LA + RP IGQ+ ++ + L A E G + H +L G G GKTT A + Sbjct: 27 KTYEVLARKYRPRRFEDLIGQEAMV---RTLSNAFETGRIAHGFMLTGVRGVGKTTTARL 83 Query: 70 IARYANAD-------------------------------------VERISAVTSGVKEIR 92 +AR N + +E +A +GV ++R Sbjct: 84 LARGLNYEPKADAKGKKGKAAGPSIHLDPPGEHCDAIMASRHPDVLELDAASRTGVADMR 143 Query: 93 EAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELN 150 + ++ AR + R + +DEVH + + +A L +E+ + FI ATTE ++ Sbjct: 144 DLLDSARYGPVSARYKVYIIDEVHMLSNASFNALLKTLEEPPPHLKFIFATTE--IRKVP 201 Query: 151 SALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARR 210 +LSR + + LK L + ++ + L + + + +E IA G R Sbjct: 202 VTVLSRCQRFDLKRLDSGELSRHLGNVAQ-------SEGANVSEEALALIARAAEGSVRD 254 Query: 211 ALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSA 270 L+ L+ +++ E++G GDR L+ A+ K+V G Sbjct: 255 GLSLLDQ------------GIVQTTDGEEVSGAAVRAMLGLGDRAR-LLDAVEKAV-GGD 300 Query: 271 PDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEG- 329 AL + G DP + + L IA++ + VA A D +T+ GPA+ Sbjct: 301 AKGALAEVREQVAGGADPAVILKDILDIAAD---------ISVAQATGDDWTQAGPADWA 351 Query: 330 --ERAIAQ 335 RA+AQ Sbjct: 352 NRTRALAQ 359 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 68/315 (21%), Positives = 127/315 (40%), Gaps = 54/315 (17%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 ++ L RP+ GQ+ ++ L AI+ + H+ + GP GTGKTT+A+ Sbjct: 2 KMAYKSLYRTYRPQTFKDVAGQEAIIT---TLKHAIDEKKIAHAYLFCGPRGTGKTTVAK 58 Query: 69 VIARYANAD-----------------------VERISAVTSGVKEIREAIERARQNRNAG 105 ++A+ N +E +A +GV+E+R I++ + G Sbjct: 59 LLAKAVNCTGNPKPCGECENCKQIENGTHPDVIEIDAASNNGVEEVRSLIDKVKYAPTQG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ + FI ATTE ++ ++SR + + Sbjct: 119 QYKVYIIDEVHMMSPGAFNALLKTLEEPPAHVIFILATTE--PHKILPTIISRCQRFDFT 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 L+ +++ Q + ++++ + Y D + IA L NG R AL+ LE Sbjct: 177 RLTDQEMVQRMQYVLKEEGKTY-------DDGSLELIARLANGGMRDALSILEQCLAY-- 227 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 L + I G D+K + L K + +L ++ Sbjct: 228 ----NDDHLSINDIHTIYG--IVSMDDKTN--------LLKVLLSKNMSESLKILDKMDK 273 Query: 284 AGGDPLYVARRCLAI 298 +G D + + I Sbjct: 274 SGIDIKRLTFDLIDI 288 >UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dictyoglomus RepID=B5YCC7_DICT6 Length = 521 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 71/339 (20%), Positives = 132/339 (38%), Gaps = 57/339 (16%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L + RP+ + +GQ+H++ L ++ H+ H+ + GP GTGKTT+A ++A+ Sbjct: 4 ALYRKWRPQTFEEVVGQEHIVI---TLQNSLRYNHIGHAYLFAGPRGTGKTTIARILAKA 60 Query: 74 ANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRT 108 N +E +A G+ EIR+ E+AR R Sbjct: 61 LNCVQGPTPTPCLKCESCVEIAEGRSIDVIEIDAASNRGIDEIRDIREKARLLPVRDRYK 120 Query: 109 ILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DEVH +A L +E+ + FI ATTE ++ +LSR + + + L+ Sbjct: 121 VYIIDEVHMLTNEAFNALLKILEEPPEHVVFIMATTE--PQKVPLTILSRCQRFDFRRLT 178 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 +++ + L + E + + + R IA G R A++ LE + ++ + Sbjct: 179 RDEVIKQLAKIAEK-------EGAKISEGALRLIAIQSQGSMRDAISLLEQLLVYSDQE- 230 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 + EL + G + Y+ K++ +I G Sbjct: 231 -----ITEELARNLLGLPT----------YEFTYNFAKALGEYNILEGYSLLQQIFQMGK 275 Query: 287 DPLYVARRCLAIASEDVGN-ADPRAMQVAIAAWDCFTRV 324 +P A+ L + AD R + + F + Sbjct: 276 NPQQFAKELLQHFRNLLLLKADERIGNLLSLTQEEFEEL 314 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 120/300 (40%), Gaps = 57/300 (19%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP+N + GQ+H+ + L AIE+G LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPKNFDELQGQEHV---SRALVNAIESGRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRN 103 +++ N + +E +A + V + RE +E + Sbjct: 58 LSKCLNCETNGLTSKPCGECGSCVEIDEGRFVDLIEVDAASRTKVDDTRELLENVQYKPT 117 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 GR + +DEVH + S +A L +E+ + F+ ATT+ +L +LSR + Sbjct: 118 RGRYKVYLIDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTD--PQKLPVTVLSRCLQFH 175 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 LK + + I + L ++ + I I+ G R AL+ L+ Sbjct: 176 LKHMEEQTISKHLAYILQQ-------ESIDFETPALELISRSAEGSMRDALSLLDQAIAF 228 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 G+ ++ E + + G + + L +++ A+ A + Sbjct: 229 ------GQGKVQEEDIRTMLGTI----------DHQFMVKLLEALANKDSAEAIKAVAEM 272 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 56/305 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP + + +GQ H+L K L A+++ LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPRSFREMVGQAHVL---KALINALDSQRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 IA+ N + +E +A + V++ RE ++ + + Sbjct: 58 IAKCLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + +A L +E+ + FI ATT+ +L + +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTD--PQKLPATILSRCLQFSL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K+++ E + + LT + G +++ D+ + +G R A++ + Sbjct: 176 KNMTPERVVEHLTHVL-------GVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFG 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E V R+ + +D+++AL + L + Sbjct: 229 EGKVMAADV------------RAMLGTLDHGQVFDVLTALLEG----DARGVLEAVRHLA 272 Query: 283 TAGGD 287 G D Sbjct: 273 EQGPD 277 >UniRef50_Q1IQ74 DNA polymerase III, subunits gamma and tau n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQ74_ACIBL Length = 632 Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 58/318 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q LA + RP+ ++ IGQ H+ + L AIE + H I G G GKTT+A + Sbjct: 1 MSYQVLARKYRPQKFSEVIGQDHVT---RTLKNAIEQQRIAHGYIFSGHRGIGKTTIARI 57 Query: 70 IARYANAD---------------------------VERISAVTSGVKEIREAIERARQNR 102 +A N +E +A G+ EIRE E AR Sbjct: 58 LAMALNCQSADHPVSEPCGVCDSCKEVKAGQSVDVIEIDAATNRGIDEIRELREAARYRP 117 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVY 160 R I +DE H+ + +A L +E+ G I F+ ATTE ++ + SR + + Sbjct: 118 ARDRFKIYILDEAHQITDAAFNALLKTLEEPPGHIVFMMATTE--PEDIPQTIRSRCQHF 175 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 ++ +DI L G + I D+ +AE +G R AL+ ++ Sbjct: 176 SFHAVKFDDIVLQLRDIA-------GKEGIGAEDDALAMLAEAGDGSMRDALSIMDQAIA 228 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 LK + + + G S+ D D+++ +H ++ ++ L + Sbjct: 229 AC------GNQLKTDDVRGLMGTVSS------DVLEDIMNGVH----ANSSESVLTTIDK 272 Query: 281 IITAGGDPLYVARRCLAI 298 ++ G PL+ A++ + Sbjct: 273 LLIEGHSPLHFAKQAVRF 290 >UniRef50_Q03ZG9 DNA polymerase III, gamma/tau subunit n=2 Tax=Leuconostoc mesenteroides RepID=Q03ZG9_LEUMM Length = 575 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 121/309 (39%), Gaps = 44/309 (14%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L RP + +GQ+ + L AI H+ + GP GTGKT+ A++ A Sbjct: 5 YQALYRVYRPRSFDDMVGQKIITQ---TLKNAIATQQTGHAYLFSGPRGTGKTSAAKIFA 61 Query: 72 RYANAD------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFN 119 R N +E +A +GV EIR + A I +DEVH + Sbjct: 62 REVNGIAPETDDSQIPDIIEIDAASNNGVDEIRNIRDGANYAPIESEYKIYIIDEVHMLS 121 Query: 120 KSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 +A L +E+ + FI ATTE ++ + +LSR + + K + + I+ + + Sbjct: 122 SGAFNALLKTLEEPPANVKFILATTE--PQKIPATILSRTQRFEFKRIDNDTIQARMAEI 179 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELL 237 ++ + I D+ IA + G R AL+ L+ + G + E Sbjct: 180 LQK-------EGISFDDDALHIIANVAEGGMRDALSILDQVLAF------GADHVTLENA 226 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 ++ G +A + + V ++AL I+ G D + L Sbjct: 227 LQVTGSTTA----------SQLVTYLQQVSNYDTESALQTLHDILLEGKDAVRFVADLLG 276 Query: 298 IASEDVGNA 306 + DV A Sbjct: 277 VLR-DVMLA 284 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 127/316 (40%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLLA---LTNALSQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCETGVTASPCGTCSSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYKPAR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSLS ++I Q L + G + + + +A+ NG R AL+ + Sbjct: 176 KSLSQDEISQQLEFIL-------GQEQLPFESQALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G R + L KS+ + + A+++ Sbjct: 228 -----GSGQVMLTQVQTMLGSIDER----------QVIGLLKSLCDADIAHLMQTTAQVL 272 Query: 283 TAGGDPLYVARRCLAI 298 + G D V R L + Sbjct: 273 SFGADADEVLRSLLEL 288 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 85/363 (23%), Positives = 130/363 (35%), Gaps = 65/363 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 T+ L RP + IGQ+H+ + L A+EAG + H+ I G GTGKTT A+V Sbjct: 1 MTYLALYREWRPRTFGEIIGQEHIT---RTLKNAVEAGRVGHAYIFCGARGTGKTTAAKV 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A G+ EIR+ E+ R A Sbjct: 58 LAKALNCTGREGAEPCNRCESCRAVNEGISVDVIEIDAASNRGIDEIRDLREKIRFAPAA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +A L +E+ I ATTE + +LSR + + Sbjct: 118 GRYRVYIIDEVHMLTSEAFNALLKTLEEPPRHAVLILATTE--PHRVPLTILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + DI + L + G + + +E R IA G R AL+ L+ A Sbjct: 176 RRIIPADIIKRLKEVA-------AGARLEVEEEALRLIARAAEGGLRDALSILDQAAAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + +I G D + + + AL + + Sbjct: 228 -----GGMKVTEAGVHQILGTVRT----------DALDRMAGCLAAGEAGRALRLVSELA 272 Query: 283 TAGGDPLYVARRCL----AIASEDVGNADPRA---MQVAIAAWDCFTR--VGPAEGERAI 333 G D AR A+ E + P A A G I Sbjct: 273 GEGKDLRLFARELAGYLRALLLEKISPGTPAGEAWGDTARMAAQAAEFSEAGLVRAVEII 332 Query: 334 AQA 336 A+A Sbjct: 333 ARA 335 >UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Tax=Gloeobacter violaceus RepID=Q7NK69_GLOVI Length = 632 Score = 263 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 68/341 (19%), Positives = 140/341 (41%), Gaps = 58/341 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ +GQ ++ L A++AG + H+ + G GTGKTT A +IA Sbjct: 3 YEPLHHKYRPQRFGDVVGQGPIVT---TLTNALKAGRIAHAYLFTGSRGTGKTTTARLIA 59 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A +GV IRE IERA+ R Sbjct: 60 KALNCIHGPTPDPCGRCEQCLAIATGSALDVIEIDAASNTGVDNIRELIERAQFAPVQSR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + + +DEVH + + + L +E+ +TF+ ATT+ ++ ++SR + + + Sbjct: 120 QKVYILDEVHMLSSAAFNCLLKTLEEPPAHVTFVLATTD--PQKVLPTVISRCQRFDFRR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + D+ + L + +DI + E +A++ G R A + L+ +A + Sbjct: 178 IPLTDMVKHLEEIA-------WKEDIDIEHEAVELVAQIAQGGLRDAESLLDQLALL--- 227 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + E + ++ G R + + + ++ + R++ + Sbjct: 228 ----EGTIGAERIWQLVGAVPERE----------LLVIGECIQAGDSTRLIEQVRRLLDS 273 Query: 285 GGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRV 324 G +PL V + L + + + P + + ++ Sbjct: 274 GKEPLQVLQDLLGFYRDLLIAHTAPDRRDLVAVTAASWQQM 314 >UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=8 Tax=Gammaproteobacteria RepID=Q21L32_SACD2 Length = 690 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 79/345 (22%), Positives = 138/345 (40%), Gaps = 69/345 (20%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP + IGQ+H+L + L A++ G LH + G G GKT++A + Sbjct: 1 MSYQVLARKWRPRTFREMIGQEHVL---RALINALDHGRLHHAYLFTGTRGVGKTSIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A + V++ RE ++ + Sbjct: 58 LAKCLNCETGVSSEPCGECSACVEISEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR I +DEVH + +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKIYLIDEVHMLSNHSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++S E I L+ +E + I + +A +G R AL+ + Sbjct: 176 KNMSPERIVGHLSHILEKEV-------IPFEESALWQLARSADGSMRDALSLTDQSISFG 228 Query: 223 EVDDSGKRV------LKPELLTEIAG--------------ERSARFDNKGD-RFYDLISA 261 S V + +L+ + G + A D DLI+ Sbjct: 229 GGKVSEDEVASMLGTIDHKLVQNLVGALIAGDGSQILTSVAKFAEHAPDFDVALADLITL 288 Query: 262 LHK-SVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 LH+ ++ + PDA + + GD + +A EDV Sbjct: 289 LHRIAIAQALPDA-------LDNSYGDRTQILEFASKLAPEDVQL 326 >UniRef50_C9LR83 Putative DNA polymerase III, gamma/tau subunit n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR83_9FIRM Length = 638 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 56/327 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP + IGQ+H+ P+ RA E L H+ + GP GTGKT++A ++A Sbjct: 3 YLSLYRKWRPSTFKEIIGQKHI---SIPILRAFEQNRLAHAYLFSGPRGTGKTSMARILA 59 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 + N E A GV EIR E R AG Sbjct: 60 KAVNCLDLKNGNPCNECANCKSINTGASMDVYEIDGASARGVDEIRVLRESVRTLPVAGN 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + + +DEVH K +A L +E+ + FI ATTE ++ +LSR + Y Sbjct: 120 KKVYIIDEVHMLTKEAFNALLKTLEEPPAHVLFILATTE--PAKIPLTILSRCQRYEFHR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +S DI++ L ++ + L E IA G R AL+ L+ + + Sbjct: 178 ISVNDIKEHLLHISQE-------SHLSLTPEAAALIAVRAEGGLRDALSLLDQCSGASAG 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 ++ L E++ ++ G +I H V G + A L + +I+ Sbjct: 231 NE-----LSAEIVYDLLGLT---------DKEQIIDLFHMIVCGKS-SATLQLFYKILQD 275 Query: 285 GGDPLYVARRCLAIA-SEDVGNADPRA 310 G +P + L S + +P A Sbjct: 276 GKEPSAILSDLLEHFRSIMICKVNPNA 302 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 40/265 (15%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP+ + +GQ H+ + L A+ LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPQTFHELVGQSHV---KQALVNALTQNRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N D +E +A + V++ RE ++ + Sbjct: 58 FAKSLNCDEGISANPCGQCSSCKDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +K +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +LS +I+ L + + + D+ R IA+ +G R AL+ + Sbjct: 176 NALSQSEIKTQLEHVLTH-------EKLNFDDDALRIIAKAADGSMRDALSLTDQAIAQT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSAR 247 D + + V L + +S Sbjct: 229 NGDINNQAVQTMLGLMDTHYSQSLL 253 >UniRef50_B3DWR2 DNA polymerase III, gamma/tau subunit n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWR2_METI4 Length = 618 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 131/340 (38%), Gaps = 66/340 (19%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q + + RP ++ +GQ+H++ + L AI G + H+ + GP GTGKTTLA ++A Sbjct: 16 YQVFSRKYRPRVFSEVVGQEHVV---RTLKNAIRLGRVAHAYLFSGPRGTGKTTLARILA 72 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E A +GV ++RE E A+ R Sbjct: 73 KSLNCADGPNADFDPDDPICLDIDAGRSLDCIEIDGASNNGVDQVRELREAAKSLPVQSR 132 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH ++ +A L +E+ + FI ATTE +++ + SR + + K Sbjct: 133 YKIYIIDEVHMLTQAAFNALLKILEEPPAHVKFIFATTE--PYKIPPTVSSRCQRFHFKR 190 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + I L + + I + IA++ G R A L+ + Sbjct: 191 IPRRLIADHLQKICIQ-------EKIDAERKALEMIADISEGALRDAEVALDQLISFY-- 241 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + E+ G + + L + AL +++ + Sbjct: 242 ----GEKIDQSSVQEMFGLVGI----------EPLCRLLTDLAQGDGRGALKEAHQLLES 287 Query: 285 GGDPLYVARRC--------LAIAS-EDVGNA-DPRAMQVA 314 G DPL + R L +AS E +G DP + Sbjct: 288 GKDPLSLLRSFRNLLHDIALYMASVESLGLELDPEELDQV 327 >UniRef50_A4CK17 DNA polymerase III subunit gamma/tau n=6 Tax=Bacteria RepID=A4CK17_9FLAO Length = 631 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 44/292 (15%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 F A + RP+ +GQQ + + L AIE HL +++ GP G GKTT A ++ Sbjct: 14 PFIVSARKYRPQQFEDVVGQQAIT---RTLLNAIENDHLAQALLFCGPRGVGKTTCARIL 70 Query: 71 ARYANAD-------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHR 117 A+ N D E +A + V +IR I++ R G+ + +DEVH Sbjct: 71 AKKINEDGNQRDGEDFAFNIFELDAASNNSVDDIRNLIDQVRIPPQVGKYKVYIIDEVHM 130 Query: 118 FNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLT 175 +++ +AFL +E+ FI ATTE ++ +LSR +++ + ++ D L Sbjct: 131 LSQAAFNAFLKTLEEPPRHAIFILATTE--KHKIIPTILSRCQIFDFRRITVGDAASYLK 188 Query: 176 QAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE 235 E Q I +E IA+ +G R AL+ + + A + K V + Sbjct: 189 YIAEQ-------QGIEADEEALHMIAQKADGAMRDALSIFDRVVSFAGNKLTRKAVAENL 241 Query: 236 LLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGD 287 + ++ D+ + A L ++ I+ G + Sbjct: 242 NVLDV----------------DVYFESTDHILKGDIPALLIYFNEILAQGFE 277 >UniRef50_D1N3S6 DNA polymerase III, subunits gamma and tau n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3S6_9BACT Length = 615 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 130/341 (38%), Gaps = 61/341 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH-LHSMILWGPPGTGKTTLAEV 69 + +Q +A + RP+ +GQQH++ + L AI H+ + GP G GKTTLA + Sbjct: 2 SEYQVIARKWRPQRFGDVVGQQHVV---RTLENAIRQQRTAHAYLFVGPRGVGKTTLARI 58 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A + ++RE E Sbjct: 59 FAKAMNCLDPQDGEPCCRCESCRAIAEERSLDVMEVDAASRNTTGDMRELAEDVLTQPVG 118 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR I +DEVH +K + L +E+ + FI ATTE ++ ++SR + + L Sbjct: 119 GRYKIYIIDEVHMLSKQAWNVLLKTVEEPPAHVKFIFATTE--VHQVLPTIISRCQRFDL 176 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + T I + L + + + + D AIA G R A + L+ M Sbjct: 177 LPIPTRLITERLRLICD-------SEQVKINDSAIGAIARAAEGGMRDAQSLLDQMIAFF 229 Query: 223 EVDDS----GKRVLKPELLTE-----------------IAGERSARFDNKGDRFYDLISA 261 D G++VL LT+ +R KG L Sbjct: 230 SQGDDTPITGEQVLSLFGLTDRTDLDALMVAMLRNAPGEVVSIVSRLARKGKNLETLFDD 289 Query: 262 LHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 L +++R A L + +I G + + R+ A+A D Sbjct: 290 LLEAMRAVQLCAILPDPSDLIDEGEEAVARYRKLAALAKPD 330 >UniRef50_C8P1Z8 DNA polymerase III, gamma and tau subunits n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1Z8_ERYRH Length = 600 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 70/317 (22%), Positives = 129/317 (40%), Gaps = 58/317 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L + RP +L + +GQ+H++ L +I + H+ + GP GTGKT++A++ Sbjct: 1 MSYQSLYRKYRPAHLDEVVGQEHVVN---VLKNSITKNKISHAYLFCGPRGTGKTSIAKL 57 Query: 70 IARYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 AR N + +E +A +GV EIR IE+ + G Sbjct: 58 FARAVNCENPDQVICGTCDNCLAVADGTHPDLIEIDAASNNGVDEIRGLIEKVKYTPILG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH ++ +A L +E+ + FI ATTE ++ ++SR + Y Sbjct: 118 KYKVYIIDEVHMLSQGAFNALLKTLEEPPSHVVFILATTE--IHKVLPTIISRCQRYDFN 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + DI + L + + +++ + IA L G R AL LE +A+ Sbjct: 176 RIGEVDIAKRLDYVLNN-------ENVEAEQGVSKLIASLSGGGLRNALTILEQAIVLAD 228 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + +I D +D S+R +A + A + Sbjct: 229 DQIT---------VNQIYDTNGIITDQDKINLFD-------SIREQQMEALVNQIAMMNE 272 Query: 284 AGGDPLYVARRCLAIAS 300 + + R + + S Sbjct: 273 KSVN---IDRLMMDLVS 286 >UniRef50_B9L148 DNA polymerase III subunit gamma/tau n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L148_THERP Length = 562 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 79/339 (23%), Positives = 132/339 (38%), Gaps = 56/339 (16%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYA 74 L + RP+ + +GQ+ + + L A+ + H+ + GP GTGKT+ A ++A+ Sbjct: 6 LYRKYRPQTFEELVGQEAI---ARTLRNAVALDRVAHAYLFCGPRGTGKTSTARLLAKAV 62 Query: 75 NAD--------------------------VERISAVTSGVKEIREAIERARQNRNAGRRT 108 N +E +A GV +IR+ E+ + R Sbjct: 63 NCRDADPWRRPCNQCGACRSIATGTAVDIIEIDAASNRGVDDIRDLREKVKYAPVELRTK 122 Query: 109 ILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKSLS 166 +DE H+ + +AFL +E+ + F+ ATTE +L + SR + + + L Sbjct: 123 FYIIDEAHQLTRDAFNAFLKTLEEPPPHVVFVLATTE--PDKLPETVASRCQRFDFRRLP 180 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 + + + L + I PD+ IA G R AL LE +A A D Sbjct: 181 VDRMVERLRFVCLR-------EGIEAPDDVLALIARRAAGSLRDALGLLERLAVFAS-DG 232 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 + V+ EL ++ G ++ DR DL++A + AL A AG Sbjct: 233 ENEPVITLELARQVLG------GSRDDRLLDLVTA----IADRDAGRALRLVAEAADAGD 282 Query: 287 DPLYVARRCLAIASEDV----GNADPRAMQVAIAAWDCF 321 D + R + + G +DP A A F Sbjct: 283 DLHQLGRELVRFTRTLLYVRAGGSDPLLPPEASALAQRF 321 >UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and tau n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C4B Length = 522 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 68/314 (21%), Positives = 123/314 (39%), Gaps = 55/314 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ + +GQ+H+ K L I+ + H+ + G GTGKTT A++ A Sbjct: 2 YLTLYRKYRPQKFSDMVGQEHIT---KTLKNQIKLNRIAHAYLFTGSRGTGKTTAAKIFA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 R N +E +A +GV +IR+ E G Sbjct: 59 RAINCKNSVDGKPCEKCVVCKEIAEGAFVNIIELDAASHNGVDDIRQINEEVLYTPAVGV 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + + +A L +E+ + FI ATT+ ++ + +LSR + + + Sbjct: 119 YKVYIIDEVHMLSPAAFNAMLKTLEEPPPYVVFILATTD--PQKIPATVLSRCQRFDFRR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +ST DI L M+ ++I + E IA L +G R AL+ LE Sbjct: 177 ISTSDICDCLLDYMQR-------ENIEIEKEAVELIARLADGGMRDALSILEQCISFYI- 228 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + ++ G +++++A+ + A+ I Sbjct: 229 ----DEKITHSKVLKLVGAV------DNALLFEMMNAVIEM----DAAKAIAVCNEINQQ 274 Query: 285 GGDPLYVARRCLAI 298 G + A+ L Sbjct: 275 GRNIKQFAKDLLMH 288 >UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q117S8_TRIEI Length = 695 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 72/344 (20%), Positives = 138/344 (40%), Gaps = 62/344 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ A +GQ + + L AI + + + GP GTGKT+ A V+A Sbjct: 3 YEPLHHKYRPQTFADLVGQDVI---AQTLTNAIHTKRIAPAYLFTGPRGTGKTSSARVLA 59 Query: 72 RYANA---------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 + N +E +A +GV IRE IER++ Sbjct: 60 KSLNCLSYDHPTPSPCGTCNVCVGITKGSTLDVIEIDAASNTGVDNIRELIERSQFAPVQ 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + S +A L +E+ + FI ATT+ + + ++SR + + Sbjct: 120 CRYKVYVIDEVHMLSVSAFNALLKTLEEPPKGVVFILATTD--PQRVLATIISRCQRFDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + E + + L + + I + E + IA++ G R A + L+ ++ +A Sbjct: 178 RRIPLEAMVKHLHHIAIE-------EKIDITTEAIQMIAQIAQGGLRDAESLLDQLSLLA 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G R DL+ L +++ L +I+ Sbjct: 231 G-------EITVERVWDLVGAVPER---------DLMV-LVEAIAADNSIKVLKCTRQIM 273 Query: 283 TAGGDPLYVARRCLAIASEDVGNAD--PRAMQVAIAAWDCFTRV 324 G +P+ V + D+ A P + + + ++ Sbjct: 274 DRGKEPIIVLQNLAGF-YRDLLIAKTAPTSKNLVALTKPTWEKL 316 >UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=4 Tax=Gammaproteobacteria RepID=A1U128_MARAV Length = 637 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 40/249 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP +GQ+H+L A L A+E LH + G G GKTT+ + Sbjct: 1 MSYQVLARKWRPRTFEDMVGQEHVLQA---LIHALEHQRLHHAYLFTGTRGVGKTTIGRL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +AR N + +E +A +GV ++RE + + Sbjct: 58 LARCLNCETGITPNPCGECDSCKEILENRFVDLIEIDAASRTGVDDMRELTDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +AFL +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ E I L + + + I D +A +G R AL+ + Sbjct: 176 KRMTPEHIVGHLKHVLTE-------EQIPFEDPALWLLARAADGSMRDALSLTDQAIAFG 228 Query: 223 EVDDSGKRV 231 + + V Sbjct: 229 NENLAASDV 237 >UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2P9_DESAS Length = 527 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 67/317 (21%), Positives = 126/317 (39%), Gaps = 55/317 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++ L RP+ A+ +GQ+H++ L A++ + H+ + GP GTGKT+ A+++A Sbjct: 3 YRALYREYRPQLFAEIMGQRHIVD---TLENALKNNRIAHAYLFCGPRGTGKTSTAKILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A G+ EIR+ ER + G+ Sbjct: 60 KALNCHQIKGVEPCNKCSSCVSVAQGSAIDVIEIDAASNRGIDEIRDLKERVKFAPTGGK 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + VDEVH +A L +E+ + F+ ATTE +L +LSR + + KS Sbjct: 120 YKVYIVDEVHMLTIEAFNALLKTLEEPPEHVIFVLATTE--PHKLPLTILSRCQRFDFKS 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + E + L ++D + + I + G R AL+ L+ + Sbjct: 178 IGAEPMTSRLKDILQD-------LQVKISPAALELIVQAAEGGLRDALSILDQIITF--- 227 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + E + + G + R +I++L + + ++L A I Sbjct: 228 --NNTAEISEEDIHNLLGTVNER----------VINSLLEYLLRGDAGSSLQVIAEIFLE 275 Query: 285 GGDPLYVARRCLAIASE 301 G D + + + Sbjct: 276 GKDLKMFVKGFASCVRD 292 >UniRef50_Q2JLX3 DNA polymerase III, subunits gamma and tau n=2 Tax=Synechococcus RepID=Q2JLX3_SYNJB Length = 779 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 137/347 (39%), Gaps = 60/347 (17%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTL 66 + ++PL + RP+ A +GQ ++ L AI G + + + GP GTGKT+ Sbjct: 2 ATAGNYEPLHLKYRPQRFADVVGQGAVVQ---TLANAIRLGRVAPAYLFCGPRGTGKTSS 58 Query: 67 AEVIARYANAD-------------------------VERISAVTSGVKEIREAIERARQN 101 A ++A+ N + +E +A +GV IRE IERA+ Sbjct: 59 ARILAKSLNCEQGPTPDPCQACSQCRAITAGASLDVLEIDAASNTGVDNIRELIERAQFA 118 Query: 102 RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARV 159 R + +DE H + + +A L +E+ + F+ ATT+ + ++SR + Sbjct: 119 PVNSRYKVYVIDECHMLSNAAFNALLKTLEEPPPRVVFVLATTD--PQRVLPTIVSRCQR 176 Query: 160 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + + + +D+ L + + I + E + +A+L G R A L+ ++ Sbjct: 177 FDFRRIPLDDMVAHLGKIAAQ-------EGIPITPEALQLVAQLSQGGLRDAERLLDQLS 229 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 + + + PE + ++ G + ++ A L Sbjct: 230 LL-------EGSITPEAVWDLVGGIPEQQLLALMD----------ALLAQDVQAVLSQTR 272 Query: 280 RIITAGGDPLYVARRCLAIASEDVGNAD--PRAMQVAIAAWDCFTRV 324 +++ G +PL + + +A+ D+ P+ ++ + + Sbjct: 273 QLLERGKEPLALLQNLVAL-YRDLLLVKTAPQQRELVAVTDSTWAAL 318 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 56/301 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP A+ +GQQH+L KPL A++ LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPSQFAEVVGQQHVL---KPLEHALDKQRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A + V++ RE ++ + Sbjct: 58 LAKALNCEEGITATPCGKCSACLEIEQGRFVDLLEIDAASRTKVEDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++ +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K+LS +DI Q L+ + + + E +A G R AL+ + Sbjct: 176 KALSNDDITQQLSYVLSQ-------EQVQADSEALPLLARSARGSMRDALSLTDQAIAQ- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + + G I+AL +SV +A + ++ Sbjct: 228 -----GGGSVSIDSVRRMLGNVPVAD----------IAALLESVLEGDAEAVMQRVDSMV 272 Query: 283 T 283 + Sbjct: 273 S 273 >UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLY2_ACIFE Length = 671 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 67/313 (21%), Positives = 125/313 (39%), Gaps = 57/313 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L RP++ +GQ + K L A+E G + H+ + GP GTGKT+ A ++A Sbjct: 3 YVALYRTWRPQDFDDLVGQAPI---KKALTNALETGRISHAYLFAGPRGTGKTSTARILA 59 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + VE +A G+ EIR+ E+ + R Sbjct: 60 KALNCEKGPTAHPCNQCSNCREITEGTCGDVVEIDAASNRGIDEIRKLREQVYFAPTSCR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +A L +E+ + FI ATTE ++ + +LSR + + + Sbjct: 120 YKVYIIDEVHMITTDAFNALLKTLEEPPEHVVFILATTE--PQKILNTILSRCQRFDFRR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + ++I + L + + G I E R +A +G R AL+ L+ + MA Sbjct: 178 ATVDEIAEHLEKVAK-------GSHIQAEPEALRLMAIQADGGLRDALSLLDQCSVMAS- 229 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + E + ++ G ++ +L++ + AL +++ Sbjct: 230 ------PVTAETVRQVLGLVGR------EKLRELVTR----IGQKNLSGALDALGQLLEQ 273 Query: 285 GGDPLYVARRCLA 297 G + + L Sbjct: 274 GKEMEQILAELLE 286 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 76/371 (20%), Positives = 136/371 (36%), Gaps = 66/371 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 T+Q LA + RP++ + +GQ+H+L A L A++ LH + G G GKTT+A + Sbjct: 1 MTYQVLARKWRPKSFGEMVGQEHVLQA---LINALDHDRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A + V++ RE +E + Sbjct: 58 LAKCLNCEQGVSSHPCGECGSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + S +A L +E+ + F+ ATT+ +L + +LSR + L Sbjct: 118 SRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTD--PQKLPATVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ E I L +E + + + + +G R AL+ + Sbjct: 176 KNMPPEQIVGHLANVLEHEM-------VSFEEPALWLLGRAASGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L + + G + L + V P L R+ Sbjct: 228 -----GSGKLIETDVRSMLGSVDL----------SFVYQLLEGVAAGDPAELLAIVGRMA 272 Query: 283 TAGGDPLYVARRCLAIASE-DVGNADPRAMQV----AIAAWDCFTRVGPAEGERAIAQAI 337 D +++ V A P A+ A +G + + Q Sbjct: 273 EHAPDFEGSTDELISMVHRVAVAQAVPDAIDNSWGDADRVAALAQSIGAEDAQL-FYQIA 331 Query: 338 V----YLACAP 344 + +A AP Sbjct: 332 INGKRDMALAP 342 >UniRef50_A5IZC8 DNA polymerase III subunit gamma and TAU n=2 Tax=Mycoplasma RepID=A5IZC8_MYCAP Length = 614 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 123/319 (38%), Gaps = 54/319 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L + RP+ GQ +++ L I + H+ + GP G GKT++A + Sbjct: 1 MSYKALYRKYRPKCFDDVKGQDYIIQ---TLKNIIRNRKISHAYLFCGPRGVGKTSVARI 57 Query: 70 IARYANA-----------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 A N +E +A +GV IRE ++ + + G Sbjct: 58 FANLINCYHNNDDYSKLCQICEENGSNTIDIIEMDAASNNGVDSIRELRDKIQHLPSVGN 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH +K +A L +E+ + FI ATT+ ++ +LSR + + + Sbjct: 118 YKIYIIDEVHMLSKGAFNALLKTLEEPPAHVIFIFATTD--PQKIPLTILSRVQRFNFRR 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +S + + + + +E + I E IA L G R AL+ ++ Sbjct: 176 MSNDTLVKQIKSILEQ-------EGIKYDAEALPYIARLAVGSMRDALSIIDQA------ 222 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + G +K + G S D +I+ S+ + AL + Sbjct: 223 NAYGNGYIKFSDVMYSFGITS------NDNLIKIIN----SLYNGKSEEALMLLQDLKNG 272 Query: 285 GGDPLYVARRCLAIASEDV 303 G DP + L+I + + Sbjct: 273 GIDPKQLVESLLSIFKDFI 291 >UniRef50_B6YRS0 DNA polymerase III gamma and tau subunit n=2 Tax=Bacteroidales RepID=B6YRS0_AZOPC Length = 471 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 72/330 (21%), Positives = 128/330 (38%), Gaps = 57/330 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + A R RP +GQ+ L+ L AI+ L H+ + GP G GKTT A + A Sbjct: 4 YIVSARRYRPATFQSVVGQRPLIT---TLKNAIQNSKLAHAYLFCGPRGVGKTTCARIFA 60 Query: 72 RYANADV--------------------------ERISAVTSGVKEIREAIERARQNRNAG 105 + N E +A + V+ IR E+ R G Sbjct: 61 KTINCTCLKEDGEACNECDFCQSFNENRSHNIYELDAASNNSVENIRFLTEQMRIPPQIG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + +DEVH + S +AFL +E+ FI ATTE +++ +LSR ++Y Sbjct: 121 HYKVYIIDEVHMLSTSAFNAFLKTLEEPPHHAMFILATTE--KYKIIPTILSRCQIYDFS 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 ++ DI + L ++ ++I E IA+ +G R AL+ + +A + Sbjct: 179 RITINDIVEYLEYIAQN-------ENISTEREALNIIAQKADGGMRDALSIFDRVASFSA 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + + V++ + + Y+ L +++ +L +II Sbjct: 232 NNITYQSVIENLNVLD----------------YEYYFRLVEAILIGDVSCSLLILNKIIR 275 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D V + + DP+ + + Sbjct: 276 KGFDLQQVIVGLSDFFRDIMVCKDPQTIVL 305 >UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBF2_9BACT Length = 638 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 65/312 (20%), Positives = 124/312 (39%), Gaps = 45/312 (14%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + A + RP +GQ L L A+++G L H+ + GP G GKTT A + A Sbjct: 4 YIVSARKYRPMTFDSVVGQSALTT---TLKNAVKSGKLAHAYLFCGPRGVGKTTCARIFA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N + E +A +GV +I+ +E+ R G Sbjct: 61 KAINCEHPREDGEACNECESCRAFNEQRSYNIFELDAASNNGVDQIKVLMEQTRIPPQVG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + + +AFL +E+ + FI ATTE ++ +LSR ++Y + Sbjct: 121 KYKVFIIDEVHMLSTAAFNAFLKTLEEPPQHVIFILATTE--KHKILPTILSRCQIYDFE 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 ++ + L E + I ++ IAE +G R AL+ + A Sbjct: 179 RMTVANTINHLKMVAEK-------EGIQYEEQALAVIAEKADGGMRDALSIFDQAASFCM 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISA----LHKSVRGSAPDAALYWYA 279 + + ++V++ + + ++ +++ L++ G L + Sbjct: 232 GNITYQKVIEDLNVLDSDNYFRLVDLALENKVAEMMVTLDGILNRGFDGGNMIQGLAQHV 291 Query: 280 RIITAGGDPLYV 291 R + DP + Sbjct: 292 RNVMMAKDPQTL 303 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 78/319 (24%), Positives = 128/319 (40%), Gaps = 63/319 (19%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F L + RP+N +GQ H++ + L A+E+G + H+ + GP GTGKT+ A+V A Sbjct: 3 FLSLYRKYRPQNFNDLVGQHHVV---RTLKNALESGRIAHAYLFAGPRGTGKTSTAKVFA 59 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 N +E +A G+ EIRE E+ + N G Sbjct: 60 MALNCIHGPTTEPCGQCENCRKIQKGQSIDVIEIDAASNRGIDEIRELREKVKFYPNEGE 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH K +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 120 YKVYIIDEVHMLTKGAFNALLKTLEEPPEKVVFILATTE--PHQVINTILSRCQRFDFSL 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L +I++ L E + + + +A NG R A++ L+ Sbjct: 178 LPVREIQERLRYICEKEEVEFEEE-------ALNILARSANGGLRDAISLLDQAISYTGN 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + L P + + G+ S +++S K V AL RII+ Sbjct: 231 N------LNPIDVQGMLGKVSR----------EVLSQFIKYVLNGNSVEALKLVNRIISR 274 Query: 285 G-------GDPLYVARRCL 296 G GD + R+ L Sbjct: 275 GNNVGRLIGDLIEYGRQLL 293 >UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 Tax=Bacteria RepID=D2QBB5_9SPHI Length = 664 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 112/318 (35%), Gaps = 56/318 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP +GQ+H+ L AI+ HL + + GP G GKTT A ++A Sbjct: 4 FVVSARKYRPATFDTVVGQEHITT---TLKNAIKTNHLASAFLFCGPRGVGKTTCARILA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N E +A + V++IR I++ R +G Sbjct: 61 KTINCQNLTAEGEACDACESCVSFNQNASFNIHELDAASNNSVEDIRNLIDQVRYPPQSG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 + I +DEVH + + +AFL +E+ FI ATTE ++ +LSR +++ Sbjct: 121 KYKIYIIDEVHMLSSAAFNAFLKTLEEPPTYAIFILATTE--KHKILPTILSRCQIFDFN 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + + I L + + I E IA+ +G R AL+ ++ A Sbjct: 179 RIQPQHIANHLAGIAQK-------EGITAETEALDLIAQKADGGLRDALSMFDLNVTFAA 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + DN YD L + +L I+ Sbjct: 232 ---------------DRIIRYKEVLDNLHILDYDYYFKLTDLLLAGKLPQSLLTVDEILR 276 Query: 284 AGGDPLYVARRCLAIASE 301 G D + Sbjct: 277 KGFDGHQFIVGLCRHFRD 294 >UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAH1_DESAH Length = 590 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 127/321 (39%), Gaps = 53/321 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ LA + RP+ + +GQ H+ L AI +G + H+++L GP GTGKTT+A + Sbjct: 1 MSYRVLALKYRPQTFDEVVGQPHVTT---TLKNAILSGRVPHAILLTGPRGTGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + E A + V ++RE E ++ Sbjct: 58 LAKAMNCETGPTPTPCNICKTCTNITAGSAVDVFEIDGASNNSVDQVRELRENVAYMPSS 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + I +DEVH + + +A L +E+ + FI ATTE ++ +LSR + + L Sbjct: 118 SKFKIYIIDEVHMLSMAAFNALLKTLEEPPDHVIFIFATTE--VHKIPVTILSRCQRHDL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA--- 219 +S I L + + E+ +A +G R +L+ L+ + Sbjct: 176 GRISLAQISAHLMTLA-------AAEGFSISQESCDLLAGEADGSMRDSLSLLDRILGSQ 228 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 SG R + + + G +DL A+ ++ RG+ + Sbjct: 229 AQTSEQTSGPRAIDDDKILGTLGII------DKTLVFDLADAIIQN-RGADI---IDLVD 278 Query: 280 RIITAGGDPLYVARRCLAIAS 300 RI T G D + Sbjct: 279 RIHTLGLDLKRFYASLIRHFR 299 >UniRef50_C0GJ85 DNA polymerase III, subunits gamma and tau n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ85_9FIRM Length = 525 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 83/346 (23%), Positives = 137/346 (39%), Gaps = 66/346 (19%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP+ A +GQQH+ + L A+E L H+ + GP GTGKT+ A+++A Sbjct: 2 YQALYRQWRPQFFADMVGQQHV---ARTLQNALEQDRLAHAYLFCGPRGTGKTSAAKILA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + E +A G+ EIRE E+AR + R Sbjct: 59 KAINCEKGPSREPCNECAACRGIQAGRVMDVQEIDAASNRGIDEIRELREKARYSPVEVR 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + VDEVH + +A L +E+ + F+ ATTE +L + ++SR + Sbjct: 119 HKVYIVDEVHMLTQEAFNALLKTLEEPPGRVLFVLATTE--PHKLPATIISRCQRLDFHL 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + DI + L ++D R + D+ IAE G R AL+ LE + +E Sbjct: 177 IGMTDIAERLRSVVDDSGR-------SIQDDALYLIAEEAAGGLRDALSLLEQIMAYSEG 229 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + S + VL G D+ S+ AAL + Sbjct: 230 NISDEDVLAV----------------LGAVGRDVYYRFTDSLLRRDLAAALLLLQEVAAG 273 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGP-AEG 329 G D + R+ ++ + + VA+ D +G + Sbjct: 274 GKDLHHFTRQAISYYRD---------LMVALTCGDDAVALGIAPDW 310 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AAZ6 Replication-associated recombination protein A n... 587 e-166 UniRef50_Q3AA20 ATPase, AAA family n=34 Tax=Bacteria RepID=Q3AA2... 585 e-165 UniRef50_C6C7V1 AAA ATPase central domain protein n=14 Tax=Prote... 577 e-163 UniRef50_Q2LUH3 ATPase, AAA family n=27 Tax=Bacteria RepID=Q2LUH... 565 e-160 UniRef50_Q74BH4 ATPase, AAA family n=3 Tax=Bacteria RepID=Q74BH4... 564 e-159 UniRef50_B5Y9V9 AAA ATPase, central region n=80 Tax=Bacteria Rep... 549 e-155 UniRef50_A3DD23 Recombination protein MgsA n=8 Tax=Bacteria RepI... 548 e-154 UniRef50_Q3B4X4 Recombination protein MgsA n=36 Tax=Bacteria Rep... 541 e-152 UniRef50_A8ZU04 AAA ATPase central domain protein n=5 Tax=Bacter... 538 e-151 UniRef50_C4KSW2 Recombination factor protein RarA n=89 Tax=Bacte... 535 e-151 UniRef50_B0CAJ0 ATPase, AAA family protein n=50 Tax=Bacteria Rep... 535 e-150 UniRef50_C0BGA7 AAA ATPase central domain protein n=4 Tax=Bacter... 532 e-149 UniRef50_C8R0G7 AAA ATPase central domain protein n=3 Tax=Bacter... 530 e-149 UniRef50_C9KPY4 Replication-associated recombination protein A n... 528 e-148 UniRef50_Q480Q0 ATPase, AAA family n=114 Tax=Gammaproteobacteria... 524 e-147 UniRef50_B0RT44 ATPase n=6 Tax=Xanthomonas RepID=B0RT44_XANCB 523 e-147 UniRef50_C6X3K0 ATPase, AAA family n=21 Tax=Bacteria RepID=C6X3K... 522 e-146 UniRef50_Q3A5K5 ATPase, AAA family n=9 Tax=Bacteria RepID=Q3A5K5... 521 e-146 UniRef50_B8DU13 AAA ATPase, central domain protein n=49 Tax=Bact... 517 e-145 UniRef50_A5FMX8 AAA ATPase, central domain protein n=9 Tax=Bacte... 517 e-145 UniRef50_B3E131 ATPase n=1 Tax=Methylacidiphilum infernorum V4 R... 515 e-144 UniRef50_B8DZZ0 AAA ATPase central domain protein n=1 Tax=Dictyo... 514 e-144 UniRef50_D2LJI0 AAA ATPase central domain protein n=1 Tax=Rhodom... 513 e-144 UniRef50_C8WQ98 AAA ATPase central domain protein n=2 Tax=Alicyc... 509 e-143 UniRef50_D1BNC9 AAA ATPase central domain protein n=4 Tax=Veillo... 508 e-142 UniRef50_Q6MPI4 ATPase, AAA family n=1 Tax=Bdellovibrio bacterio... 508 e-142 UniRef50_O13984 ATPase WRNIP1 homolog C26H5.02c n=1 Tax=Schizosa... 507 e-142 UniRef50_UPI0001C42F86 recombination factor protein RarA n=1 Tax... 506 e-142 UniRef50_O48696 F3I6.23 protein n=4 Tax=Embryophyta RepID=O48696... 506 e-142 UniRef50_Q96S55 ATPase WRNIP1 n=37 Tax=Metazoa RepID=WRIP1_HUMAN 506 e-142 UniRef50_UPI000192574D PREDICTED: similar to Werner helicase int... 503 e-141 UniRef50_D0LV62 AAA ATPase central domain protein n=6 Tax=cellul... 503 e-141 UniRef50_D0N7J3 ATPase WRNIP1 n=1 Tax=Phytophthora infestans T30... 502 e-140 UniRef50_A6QR70 Werner helicase interacting protein 1 n=6 Tax=Am... 501 e-140 UniRef50_C8WLQ0 AAA ATPase central domain protein n=3 Tax=Coriob... 501 e-140 UniRef50_B9HZJ7 Predicted protein n=3 Tax=rosids RepID=B9HZJ7_POPTR 500 e-140 UniRef50_C0X719 Crossover junction endodeoxyribonuclease n=29 Ta... 500 e-140 UniRef50_C6NSC7 ATPase, AAA family n=1 Tax=Acidithiobacillus cal... 499 e-140 UniRef50_O34528 Uncharacterized AAA domain-containing protein yr... 499 e-140 UniRef50_A4E6Q7 Putative uncharacterized protein n=3 Tax=Collins... 498 e-139 UniRef50_B6HVW8 Pc22g06370 protein n=36 Tax=cellular organisms R... 498 e-139 UniRef50_C6D7W1 AAA ATPase central domain protein n=2 Tax=Bacill... 497 e-139 UniRef50_Q2J818 Recombination protein MgsA n=12 Tax=Bacteria Rep... 496 e-139 UniRef50_A7NI76 AAA ATPase central domain protein n=22 Tax=Bacte... 496 e-139 UniRef50_Q47N55 Recombination protein MgsA n=6 Tax=Bacteria RepI... 495 e-138 UniRef50_C0R1V7 Holliday junction resolvase helicase subunit-lik... 494 e-138 UniRef50_C5RHF7 AAA ATPase central domain protein n=11 Tax=Bacte... 493 e-138 UniRef50_C6IZU9 AAA ATPase central domain-containing protein n=1... 493 e-138 UniRef50_C8W9U5 AAA ATPase central domain protein n=2 Tax=Atopob... 492 e-137 UniRef50_Q75JU2 ATPase WRNIP1 n=2 Tax=Eukaryota RepID=WRIP1_DICDI 491 e-137 UniRef50_A5WC21 Recombination protein MgsA n=9 Tax=Bacteria RepI... 491 e-137 UniRef50_B2KBM0 AAA ATPase central domain protein n=2 Tax=Elusim... 490 e-137 UniRef50_A5GNS9 ATPase related to the helicase subunit of the Ho... 489 e-137 UniRef50_B5JJN9 ATPase, AAA family protein n=2 Tax=Verrucomicrob... 489 e-137 UniRef50_D2AWQ0 Recombination factor protein RarA n=3 Tax=Bacter... 488 e-136 UniRef50_Q17P00 Werner helicase interacting protein n=3 Tax=Endo... 487 e-136 UniRef50_D2RB58 Recombination factor protein RarA n=2 Tax=Gardne... 486 e-136 UniRef50_B1ZVQ2 AAA ATPase central domain protein n=10 Tax=Bacte... 483 e-135 UniRef50_B2W7D9 DNA-dependent ATPase MGS1 n=2 Tax=Leotiomyceta R... 482 e-134 UniRef50_Q0EY57 ATPase n=1 Tax=Mariprofundus ferrooxydans PV-1 R... 481 e-134 UniRef50_Q1QXX6 Recombination protein MgsA n=9 Tax=Bacteria RepI... 481 e-134 UniRef50_Q1D8G6 ATPase, AAA family n=1 Tax=Myxococcus xanthus DK... 480 e-134 UniRef50_Q50739 Uncharacterized AAA domain-containing protein Rv... 480 e-134 UniRef50_Q6BHR7 DEHA2G16302p n=8 Tax=Saccharomycetales RepID=Q6B... 479 e-134 UniRef50_C8XD35 AAA ATPase central domain protein n=21 Tax=Actin... 479 e-134 UniRef50_C4Y1S6 Putative uncharacterized protein n=1 Tax=Clavisp... 478 e-133 UniRef50_A1SJC4 Recombination protein MgsA n=2 Tax=Actinobacteri... 475 e-132 UniRef50_C5MFE6 Putative uncharacterized protein n=1 Tax=Candida... 470 e-131 UniRef50_Q6A8J0 Uncharacterized ATPase related to the helicase s... 470 e-131 UniRef50_A6DHI5 ATPase, AAA family protein n=1 Tax=Lentisphaera ... 470 e-131 UniRef50_C4R299 Protein with DNA-dependent ATPase and ssDNA anne... 469 e-131 UniRef50_A9U314 Predicted protein n=1 Tax=Physcomitrella patens ... 467 e-130 UniRef50_B6K1T7 DNA-dependent ATPase MGS1 n=1 Tax=Schizosaccharo... 465 e-129 UniRef50_Q9WYX8 UPF0189 protein TM_0508 n=15 Tax=cellular organi... 464 e-129 UniRef50_UPI0000D57862 PREDICTED: similar to werner helicase int... 463 e-129 UniRef50_C7NB61 AAA ATPase central domain protein n=12 Tax=Fusob... 463 e-129 UniRef50_A5V4N3 Recombination protein MgsA n=171 Tax=Bacteria Re... 462 e-129 UniRef50_Q8RGJ6 ATPase associated with chromosome architecture/r... 460 e-128 UniRef50_B1KXC3 ATPase, AAA family n=17 Tax=Clostridium RepID=B1... 459 e-128 UniRef50_B2THM3 ATPase, AAA family n=25 Tax=Clostridiaceae RepID... 459 e-127 UniRef50_B1HUL5 Putative uncharacterized protein n=4 Tax=cellula... 458 e-127 UniRef50_C9M5W8 Replication-associated recombination protein A n... 456 e-127 UniRef50_A5DW03 Putative uncharacterized protein n=1 Tax=Loddero... 456 e-127 UniRef50_A0Q7R7 AAA family-ATPase n=19 Tax=Francisella RepID=A0Q... 456 e-127 UniRef50_Q4P896 Putative uncharacterized protein n=2 Tax=Ustilag... 452 e-125 UniRef50_C6BV47 AAA ATPase central domain protein n=12 Tax=Desul... 452 e-125 UniRef50_A5V6U8 Recombination protein MgsA n=1 Tax=Sphingomonas ... 452 e-125 UniRef50_Q04QW6 Holliday junction resolvase helicase subunit-lik... 451 e-125 UniRef50_P40151 DNA-dependent ATPase MGS1 n=12 Tax=Saccharomycet... 449 e-124 UniRef50_C7LWR1 AAA ATPase central domain protein n=3 Tax=Desulf... 448 e-124 UniRef50_UPI00016B2545 recombination factor protein RarA n=3 Tax... 441 e-122 UniRef50_UPI00015B415D PREDICTED: similar to werner helicase int... 441 e-122 UniRef50_C5NXY2 Replication-associated recombination protein A n... 441 e-122 UniRef50_A4EPD3 ATPase n=3 Tax=Rhodobacteraceae RepID=A4EPD3_9RHOB 441 e-122 UniRef50_A6LJD0 AAA ATPase, central domain protein n=3 Tax=Therm... 436 e-120 UniRef50_C6HUJ9 AAA ATPase n=1 Tax=Leptospirillum ferrodiazotrop... 435 e-120 UniRef50_UPI0001C3744E recombination factor protein RarA n=1 Tax... 428 e-118 UniRef50_D1B930 AAA ATPase central domain protein n=2 Tax=Synerg... 426 e-118 UniRef50_D1B0W0 AAA ATPase central domain protein n=5 Tax=Campyl... 423 e-117 UniRef50_A7ZAZ1 ATPase, AAA family protein n=45 Tax=Epsilonprote... 413 e-114 UniRef50_UPI0000DB7733 PREDICTED: similar to Werner helicase int... 410 e-113 UniRef50_A9BGH8 AAA ATPase central domain protein n=1 Tax=Petrot... 409 e-112 UniRef50_UPI0000E4A039 PREDICTED: hypothetical protein n=2 Tax=S... 409 e-112 UniRef50_C7H148 ATPase, AAA family n=1 Tax=Eubacterium saphenum ... 408 e-112 UniRef50_A0RRQ8 ATPase, AAA family n=3 Tax=Campylobacter RepID=A... 408 e-112 UniRef50_B3PM47 ATPase, related to the helicase subunit of the H... 406 e-112 UniRef50_Q2NJI8 ATPase, AAA family n=7 Tax=Mollicutes RepID=Q2NJ... 403 e-111 UniRef50_A3ERK9 Probable ATPase, AAA family n=2 Tax=Leptospirill... 399 e-109 UniRef50_C2HPK6 Crossover junction endodeoxyribonuclease ATPase ... 397 e-109 UniRef50_A9NGG4 Holliday junction DNA helicase-like ATPase n=1 T... 396 e-108 UniRef50_B1AII3 ATPase, AAA family n=14 Tax=Ureaplasma RepID=B1A... 394 e-108 UniRef50_C1SKW4 AAA ATPase n=1 Tax=Denitrovibrio acetiphilus DSM... 393 e-108 UniRef50_D1J7Q3 ATPase, AAA family n=1 Tax=Mycoplasma hominis AT... 390 e-107 UniRef50_Q043K3 Helicase subunit of the Holliday junction resolv... 388 e-106 UniRef50_A2QW62 Function: WHIP of M. musculus is involved in agi... 386 e-106 UniRef50_A5IXK5 ATPase, AAA family n=2 Tax=Mycoplasma RepID=A5IX... 384 e-105 UniRef50_Q4SLJ4 Chromosome 15 SCAF14556, whole genome shotgun se... 379 e-103 UniRef50_Q6CD04 YALI0C05038p n=2 Tax=cellular organisms RepID=Q6... 376 e-102 UniRef50_C5K6M1 Werner helicase interacting protein, putative n=... 373 e-102 UniRef50_B0EGY1 ATPase WRNIP1, putative n=2 Tax=Entamoeba RepID=... 371 e-101 UniRef50_Q7NAV9 Predicted ATP/GTPase n=1 Tax=Mycoplasma gallisep... 370 e-101 UniRef50_Q8EWR1 Predicted ATPase n=1 Tax=Mycoplasma penetrans Re... 366 e-100 UniRef50_UPI000192678D PREDICTED: similar to Werner helicase int... 366 1e-99 UniRef50_Q6KHC7 ATPase n=3 Tax=Mycoplasma RepID=Q6KHC7_MYCMO 352 2e-95 UniRef50_A8BYS0 ATPase, AAA family n=2 Tax=Giardia intestinalis ... 344 5e-93 UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=D... 344 5e-93 UniRef50_Q5KCD2 Helicase, putative n=2 Tax=Filobasidiella neofor... 342 2e-92 UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 T... 337 4e-91 UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Ta... 336 1e-90 UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Ta... 335 1e-90 UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lys... 335 2e-90 UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus Rep... 335 2e-90 UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79... 335 3e-90 UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 T... 334 4e-90 UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 T... 334 5e-90 UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacte... 333 8e-90 UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 T... 332 1e-89 UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Ta... 332 1e-89 UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 T... 332 2e-89 UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdema... 331 3e-89 UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Ba... 330 6e-89 UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacte... 330 7e-89 UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 T... 330 8e-89 UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Ta... 329 1e-88 UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clo... 329 1e-88 UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Ba... 329 1e-88 UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 T... 328 2e-88 UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, puta... 328 2e-88 UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 T... 328 3e-88 UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Ta... 328 3e-88 UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subuni... 328 3e-88 UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Ba... 328 3e-88 UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 T... 327 4e-88 UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteri... 327 4e-88 UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 T... 327 4e-88 UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Ta... 327 4e-88 UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 T... 327 5e-88 UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 T... 327 6e-88 UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Ta... 327 7e-88 UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Ta... 327 7e-88 UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 T... 326 1e-87 UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 T... 326 1e-87 UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 325 1e-87 UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 T... 325 2e-87 UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobac... 325 3e-87 UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, puta... 325 3e-87 UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 ... 324 3e-87 UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clo... 324 4e-87 UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 T... 324 5e-87 UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candida... 324 5e-87 UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Ba... 324 5e-87 UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Ba... 324 6e-87 UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bactero... 323 9e-87 UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymera... 323 1e-86 UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W... 322 1e-86 UniRef50_B8HBY1 DNA polymerase III, subunits gamma and tau n=1 T... 322 1e-86 UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Ta... 322 1e-86 UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=ce... 322 2e-86 UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 T... 322 2e-86 UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymera... 322 2e-86 UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 T... 322 2e-86 UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, puta... 321 3e-86 UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostri... 321 3e-86 UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 T... 321 3e-86 UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Ta... 321 4e-86 UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1... 321 4e-86 UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 ... 321 4e-86 UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dic... 321 4e-86 UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 T... 321 4e-86 UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax... 320 4e-86 UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Ta... 320 5e-86 UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Ta... 320 5e-86 UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 T... 320 5e-86 UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 T... 320 5e-86 UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 T... 320 6e-86 UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=roo... 320 6e-86 UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 T... 320 8e-86 UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacill... 320 8e-86 UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 T... 320 9e-86 UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 T... 320 9e-86 UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseria... 319 1e-85 UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 T... 319 1e-85 UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 T... 319 1e-85 UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, puta... 319 1e-85 UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 T... 319 1e-85 UniRef50_C3J7N6 DNA polymerase III, subunit gamma and tau n=2 Ta... 319 1e-85 UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 T... 319 2e-85 UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 T... 319 2e-85 UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=P... 319 2e-85 UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 T... 318 2e-85 UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bac... 318 2e-85 UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Sl... 318 3e-85 UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Ta... 318 3e-85 UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 T... 318 3e-85 UniRef50_A5IZC8 DNA polymerase III subunit gamma and TAU n=2 Tax... 318 3e-85 UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 T... 318 3e-85 UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 T... 318 3e-85 UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and ta... 317 4e-85 UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau sub... 317 4e-85 UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 T... 317 4e-85 UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Ha... 317 4e-85 UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 T... 317 5e-85 UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 317 5e-85 UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 T... 317 7e-85 UniRef50_A0JSD4 DNA polymerase III, subunits gamma and tau n=4 T... 317 7e-85 UniRef50_C5NYK0 DNA polymerase III subunit gamma/tau n=1 Tax=Gem... 316 8e-85 UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 ... 316 9e-85 UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=I... 316 9e-85 UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 T... 316 1e-84 UniRef50_C4LVU1 AAA family ATPase, putative n=2 Tax=Entamoeba Re... 316 1e-84 UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=ce... 316 1e-84 UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Mic... 315 2e-84 UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 T... 315 2e-84 UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase... 315 2e-84 UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 T... 315 3e-84 UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 T... 315 3e-84 UniRef50_Q3B0U5 DNA polymerase III, tau subunit n=14 Tax=Cyanoba... 314 4e-84 UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococca... 314 5e-84 UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Ta... 314 5e-84 UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunit... 314 6e-84 UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits ... 313 7e-84 UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Mi... 313 8e-84 UniRef50_B6YRS0 DNA polymerase III gamma and tau subunit n=2 Tax... 313 8e-84 UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2... 313 9e-84 UniRef50_D2PUL3 DNA polymerase III, subunits gamma and tau n=1 T... 313 1e-83 UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=unc... 313 1e-83 UniRef50_C4FVD6 Putative uncharacterized protein n=1 Tax=Catonel... 312 1e-83 UniRef50_C6W6R9 DNA polymerase III, subunits gamma and tau n=3 T... 312 1e-83 UniRef50_C7M8P5 DNA polymerase III, subunits gamma and tau n=1 T... 312 1e-83 UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 T... 312 1e-83 Sequences not found previously or not previously below threshold: >UniRef50_P0AAZ6 Replication-associated recombination protein A n=338 Tax=cellular organisms RepID=RARA_ECO57 Length = 447 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 447/447 (100%), Positives = 447/447 (100%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG Sbjct: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK Sbjct: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED Sbjct: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI Sbjct: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS Sbjct: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA Sbjct: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN Sbjct: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 RGLEGKIGEKLAWLAEQDQNSPIKRYR Sbjct: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 >UniRef50_Q3AA20 ATPase, AAA family n=34 Tax=Bacteria RepID=Q3AA20_CARHZ Length = 444 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 195/427 (45%), Positives = 275/427 (64%), Gaps = 2/427 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L ++IGQ+H+L GK L RAI + L S+I +GPPGTGKTTLA +IA Sbjct: 16 PLAYRMRPRSLDEFIGQEHILGEGKLLRRAILSDRLGSLIFYGPPGTGKTTLARIIASTT 75 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + E I+AVTSGV EIRE I++A++ G RT+LF+DE+HRFNK+QQDA LP +E G Sbjct: 76 KSGFESINAVTSGVGEIREVIKKAKEREKYYGERTVLFIDEIHRFNKAQQDALLPEVEAG 135 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TI IGATTENP FE+N+ LLSR+R++ K L E I +++ +A+ DK RG G + + Sbjct: 136 TIVLIGATTENPYFEVNAPLLSRSRIFEFKPLEPEHIREIVRRALVDKERGLGEYKVEIS 195 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +E + + GDAR ALN +E+ D+ G R + E++ + +++ +D +GD Sbjct: 196 EEALDHLVTMAAGDARAALNGIELAVLTTPPDEDGVRKITVEIIEQSMQKKAIVYDKEGD 255 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KS+RGS PDAA+Y+ AR++ AG DP ++ARR + A+EDVG ADP A+ V Sbjct: 256 NHYDTISAFIKSLRGSDPDAAVYYLARMLEAGEDPRFIARRLIVHAAEDVGLADPMALNV 315 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+AA+ VG E +A+A +Y+ACAPKSNAV A ALA R+ + +P HLR Sbjct: 316 AVAAFHALEFVGMPEARLPLAEAAIYIACAPKSNAVIKAIDRALAVVRKGENGPIPQHLR 375 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 +A KE+G G+ Y+Y HD + E Y P + R+Y P++ G E +I ++L Sbjct: 376 DAHYAGAKELGRGKGYKYPHDYPGHFVLEE-YLPENLKGQRFYEPSDSGQEAQIKQRLKE 434 Query: 434 LAEQDQN 440 L + +N Sbjct: 435 LWGKVKN 441 >UniRef50_C6C7V1 AAA ATPase central domain protein n=14 Tax=Proteobacteria RepID=C6C7V1_DICDC Length = 447 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 391/447 (87%), Positives = 411/447 (91%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MSNLSLDFS + FQPLAARMRP LAQYIGQQHLL GKPLPRAIEAG LHSMILWGPPG Sbjct: 1 MSNLSLDFSSHQFQPLAARMRPTTLAQYIGQQHLLGPGKPLPRAIEAGQLHSMILWGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGKTTLAE+I RY ADVERISAVTSG+K+IREA+ERARQNRNAGRRTILFVDEVHRFNK Sbjct: 61 TGKTTLAELIGRYGEADVERISAVTSGIKDIREAVERARQNRNAGRRTILFVDEVHRFNK 120 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQDAFLPHIEDGT+TFIGATTENPSFELNSALLSRARVYLLKSL T DIEQVL QAM D Sbjct: 121 SQQDAFLPHIEDGTVTFIGATTENPSFELNSALLSRARVYLLKSLDTADIEQVLAQAMVD 180 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 + RG GGQ IVLPDETRR +AELVNGDARRALN LEMMADMAEVD G+RVL P LL + Sbjct: 181 RERGLGGQHIVLPDETRRLLAELVNGDARRALNLLEMMADMAEVDADGQRVLTPALLKAV 240 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 +GERSARFDNKGDR+YDLISA+HKSVRGSAPDAALYWYARIITAGGDPLYVARR LAIAS Sbjct: 241 SGERSARFDNKGDRYYDLISAVHKSVRGSAPDAALYWYARIITAGGDPLYVARRLLAIAS 300 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA+ DA Sbjct: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMRDA 360 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 +++PDYDVP HLRNAPT LMKEMG G EYRYAHDE NAYAAGEVYFPPE+A+TRYY PT+ Sbjct: 361 KDKPDYDVPAHLRNAPTSLMKEMGLGAEYRYAHDETNAYAAGEVYFPPEMAETRYYQPTS 420 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKRYR 447 RGLE KIGEKLAWLA QDQNSP KRYR Sbjct: 421 RGLEAKIGEKLAWLAAQDQNSPTKRYR 447 >UniRef50_Q2LUH3 ATPase, AAA family n=27 Tax=Bacteria RepID=Q2LUH3_SYNAS Length = 478 Score = 565 bits (1458), Expect = e-160, Method: Composition-based stats. Identities = 206/446 (46%), Positives = 282/446 (63%), Gaps = 4/446 (0%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 + + + ++ + +PLA RMRPE L ++ GQ+HLL L RAIE L S+I WGPPG+G Sbjct: 28 DRNNETTEQSRRPLADRMRPETLDEFFGQEHLLKKHSLLRRAIEEDRLFSVIFWGPPGSG 87 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNKS 121 KTTLA ++A A SAV SGVKE+R+ +E A R+ +LFVDE+HRFNK+ Sbjct: 88 KTTLARIVAGETKAYFAAFSAVLSGVKELRKVVEEAEARWQNNRQKTVLFVDEIHRFNKA 147 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDAFLPH+E G IT IGATTENPSFE+ + LLSR RV +LK S ED+ ++L + + D+ Sbjct: 148 QQDAFLPHVESGLITLIGATTENPSFEVIAPLLSRCRVLVLKPFSDEDLVRILNRVLRDR 207 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 RG G + L + + +GDAR ALN+LE +A + + + + E Sbjct: 208 RRGLGNLGLELDQDALAYLVHTADGDARTALNSLEAVASLLAAGEGQSSRISRVQVEEAL 267 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 ++ ++D G Y+LISA HKS+RGS PDAALYW R++TAG DPLY+ARR + ASE Sbjct: 268 QKKGLQYDKSGAEHYNLISAFHKSLRGSDPDAALYWLGRMLTAGEDPLYIARRMVRFASE 327 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVGNADP A+ +A+ A F +G EGE A+AQA VYLA APKSNA+Y + A Sbjct: 328 DVGNADPMALSIAMTAMQAFHFIGLPEGELALAQAAVYLATAPKSNALYAGYGRVKAAIA 387 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI--AQTRYYFPT 419 VP+H+RNAPT+LMK++GYG++YRYAHD A+ E Y P + + +Y PT Sbjct: 388 ATGTLPVPLHIRNAPTRLMKDLGYGRDYRYAHDYEGAWVPQE-YLPDALLAKEHEFYRPT 446 Query: 420 NRGLEGKIGEKLAWLAEQDQNSPIKR 445 +RG E I E+L ++ + ++ Sbjct: 447 DRGYERTIRERLEKWKKRLNEARRQQ 472 >UniRef50_Q74BH4 ATPase, AAA family n=3 Tax=Bacteria RepID=Q74BH4_GEOSL Length = 440 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 212/442 (47%), Positives = 276/442 (62%), Gaps = 7/442 (1%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 + PLA RMRP L +Y+GQ+HLL GK L R IE+ L S+I WGPPG+G Sbjct: 5 DAPAAAEALRNAPLAERMRPRTLDEYVGQEHLLGEGKLLRRLIESDTLTSLIFWGPPGSG 64 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKS 121 KTTLA VIA + SA+ SG+KEIRE ++ A + + GR TILFVDE+HRFNKS Sbjct: 65 KTTLARVIANATKSHFIFFSAILSGIKEIREIVKEAEEEKKYRGRNTILFVDEIHRFNKS 124 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDAFLP++E GT T IGATTENPSFE+ + LLSR +V +L LS E++EQ+L A+ D Sbjct: 125 QQDAFLPYVERGTFTIIGATTENPSFEVVAPLLSRCKVLVLNPLSQENVEQILRSALADP 184 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 RG G + D+ +AE GD R ALNTLE A + + + E + E Sbjct: 185 ERGLGASGLAADDDALAFMAEQSGGDGRVALNTLETAARLVK-----NGRIDLESVREAI 239 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 ++ +D G+ Y++ISA KS+RGS PD ALYW AR+I AG DPL++ RR + +ASE Sbjct: 240 QKKPLLYDKGGEEHYNVISAFIKSMRGSDPDGALYWLARMIEAGEDPLFILRRMVILASE 299 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 D+GNADPRA+QVA+AA F VG EG IAQA YLA APKSNA Y AALA+ R Sbjct: 300 DIGNADPRALQVAVAALQGFQLVGMPEGRIIIAQAATYLATAPKSNASYAGIDAALAEVR 359 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 + VP+H+RNAPT+LMK++GY + Y+YAHD Y + Y P + R+Y P Sbjct: 360 KSGALPVPLHIRNAPTRLMKDLGYHKGYKYAHDYEAGYTP-QNYLPERLEGKRFYAPRGH 418 Query: 422 GLEGKIGEKLAWLAEQDQNSPI 443 G E I E++ ++ +N Sbjct: 419 GYEKTIKERMDYIRTLKENDSE 440 >UniRef50_B5Y9V9 AAA ATPase, central region n=80 Tax=Bacteria RepID=B5Y9V9_COPPD Length = 459 Score = 549 bits (1416), Expect = e-155, Method: Composition-based stats. Identities = 213/438 (48%), Positives = 289/438 (65%), Gaps = 1/438 (0%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 + + PLA RMRP L + +GQ G L + IE L S++LWGPPG GKT++A V Sbjct: 14 SSKWIPLAERMRPRTLDEIVGQDKAFGKGTLLRKLIEEDKLTSLVLWGPPGVGKTSIAMV 73 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 IA A R SAVTSG+KEI+E +E A N GRRT++FVDE+H FNK+QQDAFLP+ Sbjct: 74 IANTTKARFLRFSAVTSGIKEIKEVLEDAEVQFNMGRRTVIFVDEIHHFNKTQQDAFLPY 133 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E G + I ATTENPSFE+ S LLSR++V +L+ L EDI+ +L +A+ DK RG G + Sbjct: 134 VEKGAVVLICATTENPSFEIISPLLSRSKVVVLEPLEAEDIKTILYRALADKERGLGNER 193 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 +V+ DE IA +GDAR ALNTLEM + + G RV+ E+++E +++ +D Sbjct: 194 VVITDEQLMRIAVYSDGDARIALNTLEMAVFGTDPNSEGIRVISDEVISEALQKKTLLYD 253 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 G+ Y+LISALHKS+R S PDAALYW AR++ AG DPLYVARR + ASEDVG ADP+ Sbjct: 254 KAGEEHYNLISALHKSMRNSDPDAALYWLARMLEAGEDPLYVARRIVRFASEDVGMADPQ 313 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ A+AA+D +G E +AQA+VYL+ APKSN++Y ++ A DA E VP Sbjct: 314 ALMQAVAAFDAANYIGMPECTANLAQAVVYLSLAPKSNSLYVGYEKAKQDALETMAEPVP 373 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 +HLRNAPT+LMKE+GYG++Y+Y+HD A E PP + RYY P+++GLE K G+ Sbjct: 374 LHLRNAPTRLMKEVGYGKDYKYSHDYEEHIADMEC-LPPNLLGKRYYLPSDQGLESKYGQ 432 Query: 430 KLAWLAEQDQNSPIKRYR 447 +L L + + + Sbjct: 433 RLEHLMGVKKKRRENKSK 450 >UniRef50_A3DD23 Recombination protein MgsA n=8 Tax=Bacteria RepID=A3DD23_CLOTH Length = 432 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 192/427 (44%), Positives = 279/427 (65%), Gaps = 2/427 (0%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP L ++ GQ+ ++ GK L R I+A + S+IL+GPPGTGKT+LA +IA Sbjct: 6 EPLAYRMRPRTLEEFYGQEEIVGEGKLLNRMIKADRISSIILYGPPGTGKTSLARIIANS 65 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGR-RTILFVDEVHRFNKSQQDAFLPHIED 132 A+ E+++AVT+GV +I+ + + + RT+LF+DE+HRFNKSQQDA LP++ED Sbjct: 66 TKANFEKLNAVTAGVADIKRIVSDTQNPILNPKGRTVLFIDEIHRFNKSQQDALLPYVED 125 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GTI +GATTENP FE+N AL+SR+ V++LK L ++ I++++ A+ DK RG G DI + Sbjct: 126 GTIILVGATTENPFFEVNKALISRSSVFMLKPLGSDAIKKIIRNALTDKERGLGNMDIEI 185 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 ++ +A++ +GDAR ALN LE+ + V GK + +L+ E +++AR+D G Sbjct: 186 EEDALNFLADICDGDARIALNALELAVLTSPVGSDGKFHIDIQLIEECIQKKAARYDKSG 245 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + YD ISA KS+RGS PDAA+++ AR + AG DP+++ARR + A+EDVG A+P A+Q Sbjct: 246 EEHYDNISAFIKSMRGSDPDAAVFYLARALYAGEDPMFLARRIMICAAEDVGMANPAALQ 305 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 VA+AA VG E ++QA + +A +PKSN+ Y A AL D + + +VP+HL Sbjct: 306 VAVAAAQAVHMVGMPEARIILSQAAIMVATSPKSNSCYVAIDRALDDVKNKRTGEVPMHL 365 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 RNA T MKE+GYG+ Y+YAHD + Y P EI T YY P+ G E KI E L Sbjct: 366 RNAVTSGMKELGYGKGYKYAHDYPGNIV-DQDYLPQEIKGTVYYNPSANGYELKIKEWLE 424 Query: 433 WLAEQDQ 439 + + Sbjct: 425 KRRNKRE 431 >UniRef50_Q3B4X4 Recombination protein MgsA n=36 Tax=Bacteria RepID=Q3B4X4_PELLD Length = 457 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 197/448 (43%), Positives = 269/448 (60%), Gaps = 9/448 (2%) Query: 2 SNLSLDFSDNT----FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWG 57 +L ++ FQPLA R+RP+++ + GQ+HL+ PL R + G L SMI WG Sbjct: 9 PDLFGSPPPSSGAGAFQPLAERVRPQSIDEMAGQEHLVGPMGPLRRFLGGGQLPSMIFWG 68 Query: 58 PPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHR 117 PPG+GKTTLAE+ A + E++SA+ SGVK++R +E A +R G RT+LF+DE+HR Sbjct: 69 PPGSGKTTLAEICASALDFRFEQLSAIESGVKDVRRVLENAASSRARGIRTLLFIDEIHR 128 Query: 118 FNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 FNKSQQD L IE G + IGATTENPSFE+N+ALLSR +VY LKSL EDI V+T+A Sbjct: 129 FNKSQQDTLLHAIEQGVVVLIGATTENPSFEINAALLSRMQVYTLKSLGPEDIRLVVTRA 188 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELL 237 + + + + + D + GDAR+ALN LE A + +D ++ +LL Sbjct: 189 L-SVDPLFRDRHVQVED--MEFLLRFSGGDARKALNALE-AAFLLIAEDEDPALIGRDLL 244 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 R+ +D+ G+ Y+ +SA KS+RGS PDAAL+W AR+I G DP ++ARR + Sbjct: 245 ERALQHRAPIYDHGGEAHYNTVSAFIKSMRGSDPDAALFWLARMIEGGEDPRFIARRLVI 304 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASED+GNADP A+ +A++ + T +G E +AQ + YLA PKSNA Y A AL Sbjct: 305 FASEDIGNADPYAITLAVSVFQAVTLIGMPEARINLAQGVTYLASCPKSNASYIAVNQAL 364 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 A++ D VP HL NAPTK MK+ GYG YRY HD N + E YFP + YY Sbjct: 365 AESASLQDLAVPKHLCNAPTKFMKQEGYGAGYRYPHDFPNHFVR-ERYFPDGMEPKPYYR 423 Query: 418 PTNRGLEGKIGEKLAWLAEQDQNSPIKR 445 P G E + E+L L + +P Sbjct: 424 PVEEGREKYLAERLRSLWDDRYGAPDTE 451 >UniRef50_A8ZU04 AAA ATPase central domain protein n=5 Tax=Bacteria RepID=A8ZU04_DESOH Length = 459 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 201/440 (45%), Positives = 270/440 (61%), Gaps = 4/440 (0%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 S + +PLA RMRPE L GQ H+ L A+E G L SMILWGPPG GKTTLA Sbjct: 12 SPSGMRPLADRMRPEKLEDLAGQPHVTGPDSLLRSALEKGTLFSMILWGPPGCGKTTLAR 71 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQDAFL 127 ++A A +ISAV SGVKEIRE +E AR+ R ++ TILFVDEVHRFNKSQQDAFL Sbjct: 72 ILAGMTGAAYVQISAVLSGVKEIREVVEAARRRRGEFQKDTILFVDEVHRFNKSQQDAFL 131 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 PH+E G +T IGATTENPSFE+ AL+SR R+ +L + E + QVL +A+ D +G G Sbjct: 132 PHVESGLVTLIGATTENPSFEVIPALMSRCRLIVLNPVPEEAVRQVLLRALADTEKGLGK 191 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + + E +A L +GD R ALN LE A + + + + +++ Sbjct: 192 MGLEIEPEALAHLAALADGDVRTALNNLEAAALLRPAG--TGVTITLAGVEQALDKKALL 249 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D G+ Y+LISALHKS+RGS PDAA+YW R+++ G DP Y+ RR + ASED+GNAD Sbjct: 250 YDKSGEEHYNLISALHKSLRGSDPDAAVYWLERMLSGGEDPFYILRRMVRFASEDIGNAD 309 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ V + A + + +G EG+ AI QA VYLA APKSN++YT ++ Sbjct: 310 PSALGVTLNAMEAYRFLGSPEGDLAIVQAAVYLATAPKSNSLYTMHGEIKRVVKQTGYLP 369 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP H+RNAPT LMK++GYG+ Y+YAHD A+ + Y P ++A + +Y PT RG E + Sbjct: 370 VPKHIRNAPTNLMKDLGYGKGYKYAHDFKEAFVPQD-YLPEKLAGSLFYHPTQRGYEKTV 428 Query: 428 GEKLAWLAEQDQNSPIKRYR 447 E+L + + Sbjct: 429 KERLDKWRALKKRYRENEKK 448 >UniRef50_C4KSW2 Recombination factor protein RarA n=89 Tax=Bacteria RepID=C4KSW2_BURPS Length = 436 Score = 535 bits (1380), Expect = e-151, Method: Composition-based stats. Identities = 235/444 (52%), Positives = 294/444 (66%), Gaps = 11/444 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L +PLA +RP+ LA IGQ HLL GKPL A E+G HSMILWGPPG Sbjct: 1 MSDLFAVE---PRRPLAEALRPKTLADVIGQTHLLGEGKPLRLAFESGKPHSMILWGPPG 57 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFN 119 GKTTLA + A + + +SAV GVK+IREA+E+AR GR TILFVDE+HRFN Sbjct: 58 VGKTTLARLTALAFDCEFIALSAVLGGVKDIREAMEQARDTLNRTGRHTILFVDEIHRFN 117 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 K+QQDA LP +E G +TFIGATTENPSFE+NSALLSRA+VY+LKSL+ +++ Q+L +A Sbjct: 118 KAQQDALLPFVESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLAEDELRQLLKRA-- 175 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 + + D+ + +GDARR LN LE +G + + Sbjct: 176 ---QDVALGGLAFDDKAVDTLVGYADGDARRFLNLLEQA--QTAASSAGVTTIDAAFVES 230 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + RFD GD FYD ISALHKSVRGS+PD ALYW R++ G DP Y+ARR + +A Sbjct: 231 AMTMNARRFDKGGDNFYDQISALHKSVRGSSPDGALYWLCRMLDGGADPKYLARRVVRMA 290 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 ED+G ADPRAMQ+A A + R+G EGE A+AQA++YLACA KSNA Y A+ A+A Sbjct: 291 WEDIGLADPRAMQIANDAAQTYERLGSPEGELALAQAVLYLACAAKSNAGYNAYNEAMAF 350 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 R+ +VPVHLRNAPTKLMKE+GYG YRYAHDE NAYAAGE Y P + + R+Y P Sbjct: 351 VRQDKSREVPVHLRNAPTKLMKELGYGHAYRYAHDEPNAYAAGETYLPDGMREPRWYKPV 410 Query: 420 NRGLEGKIGEKLAWLAEQDQNSPI 443 RGLE KI +KLAWL E D+++ Sbjct: 411 PRGLETKIADKLAWLRELDRDAGK 434 >UniRef50_B0CAJ0 ATPase, AAA family protein n=50 Tax=Bacteria RepID=B0CAJ0_ACAM1 Length = 742 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 188/423 (44%), Positives = 268/423 (63%), Gaps = 4/423 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAAR+RP L +++GQ ++ G+ L RAI+A L S+I +GPPGTGKTTLA++IA Sbjct: 17 PLAARLRPRTLDEFVGQDEIVGPGRLLRRAIQADQLSSLIFYGPPGTGKTTLAQIIANTT 76 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AV +G+K+IR +++ A+ R G+RTILFVDEVHRFNK+QQDA LP +E+G Sbjct: 77 QAHFLALNAVLAGIKDIRSSVDEAQDRRGQYGQRTILFVDEVHRFNKAQQDALLPWVENG 136 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+ IGATTENP FE+N AL+SR+R++ L+SL +D+ QVL +A++DK GYG I L Sbjct: 137 TVILIGATTENPYFEVNKALVSRSRIFQLRSLMPDDLRQVLERALQDKYFGYGDTAIELE 196 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + + NGDAR LN LE+ + E DD G + + R+ +D +GD Sbjct: 197 GAATEHLINVANGDARALLNALELAIETTEPDDQGVIPITLAVAEASIQRRAVLYDKEGD 256 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 +D ISA KS+RGS PDAALYW AR++ AG DP ++ RR + +ASEDVG ADP+A+ V Sbjct: 257 AHFDTISAFIKSMRGSDPDAALYWLARMVYAGEDPRFIFRRMIILASEDVGLADPQAVGV 316 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +A F R+G EG+ +AQA +YL+ APKSN+ A+ ALA + + DVP LR Sbjct: 317 VMACAQAFDRIGLPEGQYPLAQAALYLSTAPKSNSA-LAYFDALASVEKEREGDVPNPLR 375 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + + G+G Y+Y H + + A + Y P + +Y P+++G E I ++A Sbjct: 376 DKS-RDKHAFGHGANYKYPHAYRDHWVAQQ-YLPDSLQGQVFYQPSDQGAEAAIQTQIAR 433 Query: 434 LAE 436 E Sbjct: 434 QRE 436 >UniRef50_C0BGA7 AAA ATPase central domain protein n=4 Tax=Bacteroidetes RepID=C0BGA7_9BACT Length = 425 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 187/428 (43%), Positives = 262/428 (61%), Gaps = 9/428 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP++L +Y GQ HL+ L + I G S+I WGPPGTGKTTLA+++A Sbjct: 4 PLAERMRPKSLGEYFGQDHLVGPKGSLTQMISNGVFPSLIFWGPPGTGKTTLAQLLALEK 63 Query: 75 NADVERISAVTSGVKEIREAIERARQN--RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 ++SA+ +GVKEIRE I +A + +G+ ILF+DE+HRF+KSQQD+ L +E Sbjct: 64 ERPFYQLSAINAGVKEIREIISKAEHSGGLFSGKSPILFIDEIHRFSKSQQDSLLNAVEK 123 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT IGATTENPSFE+ +ALLSR +VY+L +L ED+E++L A+E + + + Sbjct: 124 GIITLIGATTENPSFEVINALLSRCQVYVLNTLKKEDLEKILNHALEKDSIIKEYKIQLK 183 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 E EL GDAR+ L+ LE++ + + K +L +L+ E S FD G Sbjct: 184 ETEAL---IELAGGDARKLLSLLELVI---QANSKEKLILTNDLVFETVQTNSVLFDKNG 237 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD++SA KS+RGS P+ A+YW AR+I G D ++ARR L +A+ED+G A+P A+ Sbjct: 238 DFHYDIVSAFIKSIRGSDPNGAIYWLARMIEGGEDIGFIARRMLILAAEDIGIANPTALV 297 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A + + VG EG +++ +YLA +PKSN Y A AA R+ + VP+HL Sbjct: 298 LANSTFQAVNSVGYPEGRILLSECALYLATSPKSNTAYKAIGAAQEKVRQTGNLPVPLHL 357 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 RNAPTKLMKEMGYG++Y+YAHD N + E + P +I T Y P N E I E L Sbjct: 358 RNAPTKLMKEMGYGEDYKYAHDFQNQFVDQE-FLPEKIKGTTLYSPGNNSKENSIREFLK 416 Query: 433 WLAEQDQN 440 ++ Sbjct: 417 LRWKKKYG 424 >UniRef50_C8R0G7 AAA ATPase central domain protein n=3 Tax=Bacteria RepID=C8R0G7_9DELT Length = 461 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 211/448 (47%), Positives = 290/448 (64%), Gaps = 11/448 (2%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 D PLA RMRP L ++GQ+HLLA K L G+L S++LWGPPG+GKTTLA Sbjct: 14 QRDQPTTPLAERMRPARLDDFVGQRHLLADDKLLAGLSRHGYLPSLLLWGPPGSGKTTLA 73 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAF 126 ++A + AD SAV SGVKEIRE +ER+R+ R GR ++LFVDE+HRFNKSQQDAF Sbjct: 74 RILAGGSGADFVFFSAVLSGVKEIREIVERSRRIRAESGRGSVLFVDEIHRFNKSQQDAF 133 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYG 186 LPH+E G IT IGATTENPSF + + LLSR RV +L L+ ED++ +L +A+ D+ RG G Sbjct: 134 LPHVEAGLITLIGATTENPSFHVIAPLLSRCRVIVLNPLAAEDLQIILERALSDEERGLG 193 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE---------VDDSGKRVLKPELL 237 + + E + + +GDAR LN+LE+ A +A+ + G+ + + Sbjct: 194 KLRLKISREAADHLISIADGDARSLLNSLEIAAALAQDQARGQTASQEIGGEVQIGLTTV 253 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E S R+D G+ Y+LISALHKS+R S PD ALYW R++ AG +PLY+ARR + Sbjct: 254 EEAIQRHSLRYDADGEEHYNLISALHKSLRDSDPDGALYWLGRMLAAGEEPLYIARRLIR 313 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASED+GNADP+A+ +A+ A + + +G EGE A+AQA+VYLA APKSNAVY A+ L Sbjct: 314 FASEDIGNADPQALGLAVQARESYHLLGSPEGELALAQAVVYLATAPKSNAVYAAYNQVL 373 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 A ++ VP+HLRNAPTKLM+++ YG++Y+YAHD+ + + P ++A TR+Y Sbjct: 374 ATIKKSGSLPVPLHLRNAPTKLMRDLNYGKDYQYAHDDRLGLVDQQ-HLPDQLAGTRFYH 432 Query: 418 PTNRGLEGKIGEKLAWLAEQDQNSPIKR 445 PTNRG E + E+L + + Sbjct: 433 PTNRGHEALVKERLEKWRKILAQRKKTQ 460 >UniRef50_C9KPY4 Replication-associated recombination protein A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY4_9FIRM Length = 462 Score = 528 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 197/428 (46%), Positives = 271/428 (63%), Gaps = 5/428 (1%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 TF+PLA RMRP N +++GQQ + G L R IE + S+I +GPPGTGKTTLA++IA Sbjct: 38 TFEPLARRMRPRNFDEFVGQQEAVGRGHFLRRMIEMDQIPSIIFYGPPGTGKTTLAQMIA 97 Query: 72 RYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQDAFLPHI 130 ++ E+++AV++G+ ++R ++ A + R RRTI+F+DE+HRFNKSQQD LP++ Sbjct: 98 AMTDSAFEKLNAVSAGISDLRRIVKEADEARRYYQRRTIVFIDEIHRFNKSQQDVLLPYV 157 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 EDG + IGATTENP FE+N ALLSR R+ L L+ + +VL +A++D+ RG GGQ + Sbjct: 158 EDGRLILIGATTENPFFEVNHALLSRVRIVRLYQLTDAQLVEVLRRALKDEERGLGGQHV 217 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 +PDE A+A++ GDAR ALN LE A M + + ++L EI GER R+D Sbjct: 218 EVPDEVLLAMAQIAGGDARMALNLLEGAAAMLP---TTGGTVTLDMLEEITGERVQRYDK 274 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 GD YD SA KS+RGS PDAAL++ AR++ AG D ++ARR + ASEDVGNADP A Sbjct: 275 TGDNHYDTASAFIKSMRGSDPDAALHYLARMLAAGEDVKFIARRIVICASEDVGNADPMA 334 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A+AA + VG E +AQA+ Y+A APKSNA Y AAL D R + VP Sbjct: 335 LPLAMAAAEAVQFVGMPEARITLAQAVTYIASAPKSNAAYLGIDAALKDVRTKDCGTVPK 394 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLR+A K +G+GQ YRY HD N + + Y P +I YY PT+ G E + + Sbjct: 395 HLRDAHYKGAAALGHGQSYRYPHDYPNHF-EAQDYLPDKIRTAHYYEPTDIGREKVLHDY 453 Query: 431 LAWLAEQD 438 L + Sbjct: 454 LRKCWPER 461 >UniRef50_Q480Q0 ATPase, AAA family n=114 Tax=Gammaproteobacteria RepID=Q480Q0_COLP3 Length = 511 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 270/463 (58%), Positives = 336/463 (72%), Gaps = 24/463 (5%) Query: 7 DFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTL 66 + + ++F PLAA+MRP+ LA Y+GQQH+L PL ++IE GH HS+I WGPPG+GKTTL Sbjct: 50 NAAASSFMPLAAKMRPKTLADYVGQQHILGGDSPLAQSIEQGHCHSLIFWGPPGSGKTTL 109 Query: 67 AEVIARYANADVERISAVTSGVKEIREAIERARQNRN----AGRRTILFVDEVHRFNKSQ 122 AE+IA++ANA++ER+SAVTSG+KEIR AIE+A+ RRT+LFVDEVHRFNKSQ Sbjct: 110 AEIIAQHANAEIERVSAVTSGIKEIRSAIEKAKLRAQGEGANKRRTVLFVDEVHRFNKSQ 169 Query: 123 QDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT 182 QDAFLPHIEDGTI FIGATTENP+FELN ALLSRAR+Y LK L+ +D+ QVL +A+ Sbjct: 170 QDAFLPHIEDGTIIFIGATTENPAFELNQALLSRARLYTLKKLTRDDLAQVLQRAI-SLC 228 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA--------------EVDDSG 228 I L + ++++ +GDARR LN LE D + + Sbjct: 229 EAEQQLSIKLSVDAKQSLLNRSDGDARRLLNLLENCLDSSVTTHENKQDDQHGEQGVSGD 288 Query: 229 KRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP 288 + + EL+ ++AG + A +D GD FYDLISA HKSVRGS+PDAALYWYARI+TAGGD Sbjct: 289 IKTVTVELIAQVAGSKIALYDKGGDAFYDLISAFHKSVRGSSPDAALYWYARILTAGGDA 348 Query: 289 LYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNA 348 LYVARR LAIASED+GNADPRAMQ+AI AWD F RVGP+EGERAIAQA VY+A APKSNA Sbjct: 349 LYVARRLLAIASEDIGNADPRAMQLAINAWDTFHRVGPSEGERAIAQATVYMALAPKSNA 408 Query: 349 VYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPP 408 VY AF A A++ D DVP+HL+NA + + K++G+G EYRYAHDE NA+AAGE YFP Sbjct: 409 VYQAFNKAKILAQQTCDLDVPLHLKNATSSITKDLGHGSEYRYAHDEVNAFAAGENYFPE 468 Query: 409 EIA-----QTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRY 446 +A TR Y PT RGLE K+ EKL +L + D+NS +RY Sbjct: 469 ALAKGDSSHTRLYQPTERGLEKKLKEKLDYLNQLDRNSHDQRY 511 >UniRef50_B0RT44 ATPase n=6 Tax=Xanthomonas RepID=B0RT44_XANCB Length = 456 Score = 523 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 225/437 (51%), Positives = 295/437 (67%), Gaps = 3/437 (0%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 + PLA RMRP L + +GQ+ LLAA L RA+E+G +HSMILWGPPG GKTTLA ++ Sbjct: 20 SAMGPLAERMRPRTLDEMVGQKRLLAADSALRRAVESGRVHSMILWGPPGCGKTTLALLL 79 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A YA+A+ + ISAV SG+ ++R+ + A Q +GRRT+LFVDEVHRFNK+QQDAFLPHI Sbjct: 80 AHYADAEFKAISAVLSGLPDVRQVLAEAAQRFASGRRTVLFVDEVHRFNKAQQDAFLPHI 139 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E GTI F+GATTENPSFELNSALLSR RV++L+ +S +DI + L +A+ D RG G + I Sbjct: 140 ERGTILFVGATTENPSFELNSALLSRCRVHVLEGVSPQDIVEALQRALHDAERGLGQETI 199 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + + + IA +GD RRAL LE+ A++A + + P L ++ +R+ RFD Sbjct: 200 QVSEASLLEIASAADGDVRRALTLLEIAAELATGEG---GEITPRTLLQVLADRTRRFDK 256 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 G++FYD ISALHKSVR S PDAALYW R++ G DP Y+ARR +A ED+G ADPRA Sbjct: 257 NGEQFYDQISALHKSVRSSNPDAALYWLTRMLDGGCDPAYLARRLTRMAIEDIGLADPRA 316 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 +A+ AWD + R+G EGE A AQ ++YLA KSNA Y AF A A+ R +VP+ Sbjct: 317 QSMALEAWDIYERLGSPEGELAFAQLVLYLASTAKSNAGYAAFNQAKAEVRASGTQEVPL 376 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLRNAPTKLMK +GYGQ+Y+Y HD A + FP + + YY P RG+E K+ EK Sbjct: 377 HLRNAPTKLMKTLGYGQDYQYDHDAEGGIALDQTGFPDAMGERVYYNPVPRGMEIKLKEK 436 Query: 431 LAWLAEQDQNSPIKRYR 447 L L E + + + Sbjct: 437 LDRLREARAQARADKGK 453 >UniRef50_C6X3K0 ATPase, AAA family n=21 Tax=Bacteria RepID=C6X3K0_FLAB3 Length = 442 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 177/429 (41%), Positives = 269/429 (62%), Gaps = 7/429 (1%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 + PLA +MRP+ L + GQ+HL + + +E L+S+I WGPPGTGKTT+AE+I+ Sbjct: 20 SNTPLAEQMRPKTLDEVRGQEHLTGEKGTVRKMLENDTLNSLIFWGPPGTGKTTIAEIIS 79 Query: 72 RYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 + ++SAV+SGVK++RE IE A+ QN +G+ ILF+DE+HRFNKSQQD+ L + Sbjct: 80 EQSGRKFFKLSAVSSGVKDVREVIEEAKKQNLFSGKSPILFIDEIHRFNKSQQDSLLHAV 139 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G I IGATTENPSFE+ SALLSR++VY+LKSLS E +E++ ++++ +G + Sbjct: 140 EKGWIVLIGATTENPSFEVVSALLSRSQVYVLKSLSYEKLEELAELSLKNYNASHGTEFR 199 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + E + GDAR+ +N++E + + +S K+ + + E+ E A +D Sbjct: 200 IKDKEAF---IQYSGGDARKLINSVENVLN--NFKNSDKKEISNADVLEVLQETMALYDK 254 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 G++ YD+ISA KS+RGS P+ A+YW AR++ G D ++ARR L +A+ED+G A+P A Sbjct: 255 NGEQHYDIISAFIKSMRGSDPNGAVYWLARMLVGGEDVKFIARRMLILAAEDIGLANPNA 314 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A + +G E +++ VYLA +PKSN+ Y A A+A ++ + VP+ Sbjct: 315 LVIANNCFQAVNVIGNPEARIILSETTVYLAVSPKSNSTYLAINEAMAFVKKTGNLPVPL 374 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLRNAPTKLMK++ YG++Y YAH + E + P EI+ ++Y P N E KI E+ Sbjct: 375 HLRNAPTKLMKDLNYGKDYDYAHSHEGNFVDLE-FLPDEISGEKFYNPGNNSTENKIKEE 433 Query: 431 LAWLAEQDQ 439 L + Sbjct: 434 LNRKWKGKY 442 >UniRef50_Q3A5K5 ATPase, AAA family n=9 Tax=Bacteria RepID=Q3A5K5_PELCD Length = 726 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 197/440 (44%), Positives = 272/440 (61%), Gaps = 9/440 (2%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 NL S + +PLA+RMRP L +Y+GQ H+L G+ L RAI A L S+I +GPPGTG Sbjct: 2 NLFSQASSFSSEPLASRMRPRTLEEYVGQDHILGEGRLLRRAIRADQLSSLIFYGPPGTG 61 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKS 121 KTTLA+VIA + ++AV SGVK++REAIE ARQ++ +RTILFVDEVHR+NKS Sbjct: 62 KTTLAQVIANSTASRFVSMNAVLSGVKDLREAIEDARQSQEYYDKRTILFVDEVHRWNKS 121 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDA LP +E GTI IGATTENP FE+N AL+SR+RV+ L L+ E++ Q++TQ ++DK Sbjct: 122 QQDALLPWVEKGTIILIGATTENPYFEVNKALVSRSRVFQLLGLTEENLRQIVTQTLQDK 181 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD----DSGKRVLKPELL 237 RGYG + + + + +GDAR LN L++ + + + + Sbjct: 182 QRGYGKWQVEFEPDALDHLVRVASGDARSLLNALQLAVETTPESFPPPANSRIHITLSAA 241 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E +++ +D +GD +D ISA KS+RGS PDAALYW AR++ AG DP Y+ RR L Sbjct: 242 EESIQQKAVLYDKEGDYHFDTISAFIKSLRGSDPDAALYWMARMVRAGEDPRYIFRRMLI 301 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVG ADP A+ V AA F RVG EG+ + QA +YLA PKSN+ F A Sbjct: 302 SASEDVGMADPYALGVVEAAASAFDRVGLPEGQFHLTQATLYLATCPKSNSSLAFFDALE 361 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 A A+E + +VP HLR++ + G+G+ Y+Y H + + A + Y P + +Y Sbjct: 362 AVAKE--EAEVPNHLRDSS-RDEHSFGHGKGYKYPHAFRDHWVAQQ-YLPGTLKGRIFYQ 417 Query: 418 PTNRGLEGKIGEKLAWLAEQ 437 PT +G EG I ++ E+ Sbjct: 418 PTGQGYEGSIQTQVIRHREE 437 >UniRef50_B8DU13 AAA ATPase, central domain protein n=49 Tax=Bacteria RepID=B8DU13_BIFA0 Length = 504 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 183/448 (40%), Positives = 264/448 (58%), Gaps = 11/448 (2%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH------LHSMILWGP 58 + D S+ +PLA RMRP L + +GQ+H+LA G PL R ++ S+IL+GP Sbjct: 8 ASDPSEEVVRPLAVRMRPTTLDEVVGQRHVLAPGSPLRRLADSASTGSLTAPSSVILFGP 67 Query: 59 PGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHR 117 PG GKTTLA ++A+ + E +SAVTSGVK++RE + RA + + G+ T+LF+DEVHR Sbjct: 68 PGVGKTTLAHIVAKQSGRQYEELSAVTSGVKDLREVLRRAHERLVSQGKETVLFIDEVHR 127 Query: 118 FNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 F+KSQQDA LP +E+ +TFI ATTENPSF + LLSR+ V L+SL E++ V+ +A Sbjct: 128 FSKSQQDALLPSVENRDVTFIAATTENPSFSVIKPLLSRSVVVKLESLEPEELRTVIERA 187 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA-DMAEVDDSGKRVLKPEL 236 + + G + + + I L GDAR++L LE A + E + + ++ Sbjct: 188 VSNPRGLGG--KVRVQGDAVDGIIRLAGGDARKSLTILEAAAGAVDESGSNVPAEITTDV 245 Query: 237 LTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCL 296 ++ + + R+D GD YD+ISA KS+RGS DA L++ AR+I AG DP ++ARR + Sbjct: 246 VSTVMDVAAVRYDRNGDDHYDVISAFIKSMRGSDVDATLHYLARMIRAGEDPRFIARRIM 305 Query: 297 AIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAA 356 A+E+VG A P+ +Q+ +AA +G E +++A + +A APKSNA YTA A Sbjct: 306 IAAAEEVGMAAPQILQITVAAAQAVQMIGMPEARIILSEAAIAVATAPKSNASYTAINQA 365 Query: 357 LADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 LAD VP+H+RNAPT LMK G + Y YAHD NA + Y P + YY Sbjct: 366 LADVDAGLIGQVPLHIRNAPTTLMKSWGNHEGYHYAHDYPNAVVEQQ-YMPDVLVGREYY 424 Query: 417 FPTNRGLEGKIGEKLAWLAEQDQNSPIK 444 P +RG E +IG +L + P Sbjct: 425 HPNSRGYEREIGPRLDRIRAIIHGEPAP 452 >UniRef50_A5FMX8 AAA ATPase, central domain protein n=9 Tax=Bacteroidetes RepID=A5FMX8_FLAJ1 Length = 425 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 177/429 (41%), Positives = 261/429 (60%), Gaps = 11/429 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP L YI Q HL+ L + I G + S+I WGPPGTGKTTLA++IA+ + Sbjct: 4 PLAERIRPRTLEDYISQSHLVGPNGSLTQQISKGIIPSLIFWGPPGTGKTTLAQIIAQES 63 Query: 75 NADVERISAVTSGVKEIREAIERARQN--RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 +SA+ SGVK+IR+ IE+A+Q+ + ILF+DE+HRF+KSQQD+ L +E Sbjct: 64 KRPFYELSAINSGVKDIRDVIEKAKQSGGLFTAKNPILFIDEIHRFSKSQQDSLLAAVEK 123 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT IGATTENPSFE+ ALLSR++VY+L + + +D+E +L +A+ + ++I L Sbjct: 124 GWITLIGATTENPSFEVIPALLSRSQVYILNAFTKDDLEALLHRAI-KIDKELSSKNITL 182 Query: 193 -PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 E L GD R+ LN E++ + + S + V+ + + + + + +D Sbjct: 183 KETEAL---LRLSGGDGRKLLNIFELVVNASA---SDEIVITNDRVLALVQQNTVLYDKT 236 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 G++ YD++SA KS+RGS P+ A+YW AR+I G D ++ARR L ++SED+GNA+P A Sbjct: 237 GEQHYDIVSAFIKSIRGSDPNGAVYWLARMIEGGEDVKFIARRMLILSSEDIGNANPTAF 296 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A + + +G E ++Q +YLA +PKSNA Y A A ++ D VP+H Sbjct: 297 IMANNTFQAVSTIGYPESRIILSQCAIYLATSPKSNASYMAIGNAQQLVKQTGDLPVPIH 356 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 LRNAPTKLMKE+GYG++Y+Y+HD AN +A E + P I +T Y P + E E L Sbjct: 357 LRNAPTKLMKELGYGEDYKYSHDYANNFAEQE-FLPDAIKETVLYNPGSNSRENSNREFL 415 Query: 432 AWLAEQDQN 440 + Sbjct: 416 KNRWKDKYG 424 >UniRef50_B3E131 ATPase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E131_METI4 Length = 454 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 170/440 (38%), Positives = 265/440 (60%), Gaps = 6/440 (1%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 + + PL+ +MRP L + +GQ+ +L GKPL R I+A + S+IL+GPPGTGKTT Sbjct: 12 TEQPTSPTAPLSTKMRPRTLEELVGQEDILLPGKPLRRLIDADRIQSLILYGPPGTGKTT 71 Query: 66 LAEVIARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQD 124 LAE+IA+ + R++AV +GV +IR+ I +A + + T+LF+DE+HRFNKSQQD Sbjct: 72 LAEIIAKKTKSFFARLNAVEAGVSDIRKVIGQAALRWKKEKKHTLLFIDEIHRFNKSQQD 131 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 LP +E G I IGATT NP F L + LLSR+ ++ K LS + +E +L +A+ DK RG Sbjct: 132 VLLPDLETGIIKLIGATTHNPCFYLTAPLLSRSHLFEFKPLSKQSLETLLLRALTDKERG 191 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA-EVDDSGKRVLKPELLTEIAGE 243 G ++ + E + + L GDARR LN LE+ + + + +L E + + + Sbjct: 192 LGNYEVSIEKEAKEFLLNLCEGDARRLLNYLEIAVLSSLQENQPAPVILNIETIQNLVQK 251 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 + R+D+ D YD ISA KS+RGS PD+ALYW A++I+AG DP ++ARR + +A+ED+ Sbjct: 252 KIPRYDHGEDEHYDTISAFIKSIRGSDPDSALYWLAKMISAGEDPRFIARRLVILATEDI 311 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G A+P+ + +A AA++ ++G EG +A A +YLA +PKSN+ Y A A+ + Sbjct: 312 GLANPQGLPIATAAFEAIEKIGMPEGRIPLAFATLYLALSPKSNSAYKAIDKAIEWIEKE 371 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 +VP L+++ K++G G Y Y+H+ +A + + Y I +Y PT+RG Sbjct: 372 ATVEVPQMLKDSHYSGAKKLGKGVGYLYSHNFRDA-VSPQRY---GIEPGTFYVPTDRGK 427 Query: 424 EGKIGEKLAWLAEQDQNSPI 443 E + E+L ++ + Sbjct: 428 EKEFKERLEYIEKLRTEEKN 447 >UniRef50_B8DZZ0 AAA ATPase central domain protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZZ0_DICTD Length = 431 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 175/434 (40%), Positives = 268/434 (61%), Gaps = 13/434 (2%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 DN+++PL+ RMRP L +++G + ++ L +AI G+L S+I++GPPG+GKTTL+ Sbjct: 10 EDNSYEPLSFRMRPRTLEEFLGAEDIIGEKSFLRKAINKGYLPSLIIYGPPGSGKTTLSV 69 Query: 69 VIARYANADVERISAVTSGVKEIREAIERA-RQNRNAGRRTILFVDEVHRFNKSQQDAFL 127 ++A+ NA+ ++A GV+E++EA+++A R +RT+LF+DE+H FNK QQD L Sbjct: 70 LLAKAINAEFIELNAAIVGVQELKEALQKAKRNLELYNKRTVLFLDEIHHFNKLQQDVLL 129 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 P +E G + IGATTENP F LN+ LLSR R+ LK LS E+IE+++ +A+EDK RG G Sbjct: 130 PFVERGIMILIGATTENPFFSLNTTLLSRCRLVELKPLSKENIERIIKRALEDKERGLGE 189 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 +D+ + ++ I NGDAR ALNTLE+ + M ++GK ++ ++ E+ G+R R Sbjct: 190 RDLEINEDAMEEIVRFANGDARIALNTLELASFMVAPSENGKLIITRNIVKEVIGKRIFR 249 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D +GD Y ISA KS+RGS PDAALY+ A+++ +G DP ++ARR + A+ED+G AD Sbjct: 250 YDQRGDEHYHTISAFIKSIRGSDPDAALYYLAKMLLSGEDPRFIARRLIIHAAEDIGMAD 309 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+ +A +A+ VG E +A+A VYLA APKSN++ A+ E Sbjct: 310 PFALVIAQSAYYAVDVVGMPEARIPLAEATVYLATAPKSNSIIIGIDKAMRYIEEHGISV 369 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 +P HLR G +Y Y HD + + + Y P +I +Y P+++G E I Sbjct: 370 IPEHLR----------GNSPKYIYPHDYPDHFVK-QKYLPEDI-GEIFYSPSDQGKEKMI 417 Query: 428 GEKLAWLAEQDQNS 441 E+L L ++ Sbjct: 418 RERLENLWKERYKK 431 >UniRef50_D2LJI0 AAA ATPase central domain protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LJI0_RHOVA Length = 455 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 205/434 (47%), Positives = 270/434 (62%), Gaps = 9/434 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PL R+RP +L IGQ+HLL G PL R + SMI WGPPGTGKTT+A ++A+ Sbjct: 31 RPLPDRLRPASLGDVIGQEHLLGEGGPLRRIADGEAPRSMIFWGPPGTGKTTVARLMAKG 90 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A A E+ISA+ SGV ++R+ + A+ + G+ TILFVDE+HRFN+SQQD+FLP +EDG Sbjct: 91 AGAHFEQISAIFSGVADLRKVFDAAKDRQRFGQGTILFVDEIHRFNRSQQDSFLPFVEDG 150 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TI IGATTENPSFELN ALLSRA+V + + L+ ++IEQ+L +A G+ + L Sbjct: 151 TIILIGATTENPSFELNGALLSRAKVLVFRRLTDDNIEQLLARA-----ESVLGKTLPLT 205 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + R A+ + +GD R ALN E + + LTEI R+ +D D Sbjct: 206 PDARGALIGMADGDGRTALNLTEDVFATGR---DPSHPIDTAELTEIVQRRAPLYDKNRD 262 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YDLISALHK+VRGS PDAALYW+ R+I G PLY+ARR + +A ED+G ADP A+ Sbjct: 263 GHYDLISALHKAVRGSDPDAALYWFCRMIDGGEAPLYLARRMVRMAVEDIGLADPNALVQ 322 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A AA D + +G EGE A+AQ +VYLA APKSNA Y A+ AA+ A+E P H+ Sbjct: 323 ANAAKDAYDFLGSPEGELALAQCVVYLATAPKSNAAYKAYGAAMRYAKESGSLPPPKHIL 382 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 NAPTKLMK GYG Y Y H +G+ YFP + + +Y P RG E +I E+L Sbjct: 383 NAPTKLMKSEGYGAGYVYDHATEEG-VSGQNYFPDGLDRAEFYHPGGRGYEVRIEERLRA 441 Query: 434 LAEQDQNSPIKRYR 447 AE + + R Sbjct: 442 WAEVRREVARRGGR 455 >UniRef50_C8WQ98 AAA ATPase central domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ98_ALIAD Length = 447 Score = 509 bits (1311), Expect = e-143, Method: Composition-based stats. Identities = 181/423 (42%), Positives = 254/423 (60%), Gaps = 3/423 (0%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 L+ + PLA RMRP +L + +G ++L+ L R IE L S+IL+GPPGTGK Sbjct: 6 LASEHEAEREAPLAYRMRPRSLDEMVGHENLVGRDGILRRMIERDRLMSIILYGPPGTGK 65 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQ 122 TT+AEVIAR A ++AVTSG+ ++R+A+E AR+ R RRT++F+DE+HRFNKSQ Sbjct: 66 TTIAEVIARQTKARFIPLNAVTSGIADVRKAVETAREERDLYARRTVVFLDEIHRFNKSQ 125 Query: 123 QDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT 182 QDA LPH+E G ++ +GATTENP F++N+ALLSR+ V+ L+ LS +DI +++ A+ D+ Sbjct: 126 QDALLPHVEAGLLSLVGATTENPYFDVNAALLSRSHVFRLEPLSPDDIGRLVDMAIADEE 185 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 RG G + L + RR + GDARRALN LE+ A A V G + + Sbjct: 186 RGLGRMRVRLHPDARRVLTLQARGDARRALNLLELAAFAARVGPDGATEIGMREVEAALE 245 Query: 243 ERS-ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 R+D GD YD ISA KSVRGS +AA+ W A+++ G DP ++ARR + +A+E Sbjct: 246 ASGGPRYDRAGDDHYDTISAFIKSVRGSDVNAAMLWLAKMLEGGEDPAFIARRLMILAAE 305 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG ADP A+ +A++ W +G E +A+ YLA APKSN Y A AL D R Sbjct: 306 DVGMADPNALPIAVSGWQAAMAIGMPEARIVLAEVTAYLAKAPKSNHAYMAINRALDDVR 365 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 +VP+HLR+ K K +G+G+ Y Y HD Y + Y+P + YY + Sbjct: 366 SGLPLEVPLHLRSTAYKGAKALGHGEGYLYPHDYPGHYV-EQNYWPIGVEPRAYYREGDD 424 Query: 422 GLE 424 E Sbjct: 425 DRE 427 >UniRef50_D1BNC9 AAA ATPase central domain protein n=4 Tax=Veillonellaceae RepID=D1BNC9_VEIPT Length = 433 Score = 508 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 181/441 (41%), Positives = 261/441 (59%), Gaps = 9/441 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 M +L NT++PL RMRP L GQ+ + G L +E + SM+ +GP G Sbjct: 1 MDSLFDMTPTNTYEPLPVRMRPTKLDHLYGQEKAIGKGTFLRAMVEKDTIPSMLFYGPCG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFN 119 TGKTTLA +IA+ +N+ ++A +G+ E+R IE AR+ R+ +RTILF+DE+HRFN Sbjct: 61 TGKTTLAGIIAKVSNSHFVNLNATNAGIGELRTIIEDARKRVRSLQQRTILFLDEIHRFN 120 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 KSQQD LP +EDGTI IGATTENP FE+N LLSR R+ L++L+ + I Q+L +A+ Sbjct: 121 KSQQDVLLPCVEDGTIILIGATTENPFFEVNRPLLSRLRLITLEALTPKAIGQILRRAIT 180 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 D+ G G + + + DE + VNGD R ALN LE A M + + E+L + Sbjct: 181 DEAVGLGKRHLQVTDEVLEDVGIFVNGDGRMALNILEQAAAM----VPDEGTITIEVLEK 236 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + G R +D KGD YD ISA KS+RGS A +++ AR+I AG DP ++ARR + A Sbjct: 237 VVGRRIYTYDKKGDSHYDTISAFIKSMRGSDVQATVHYLARMIEAGEDPNFIARRIVICA 296 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 +EDVG ADP+A+ +A AA VG E +++A Y+A APKSN+ Y A AA++D Sbjct: 297 AEDVGLADPQALILANAAAQAAHMVGFPEARIILSEAACYVALAPKSNSAYVAIDAAISD 356 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 R + VP HL+++ ++G+G+ Y+YAH+ N Y + Y P + YY Sbjct: 357 VRHKDCGQVPDHLKDSHYSGASKLGHGKAYKYAHNYPNGYVKQQ-YLPTPLIDATYYKGI 415 Query: 420 NRGLEGKIGEKLAWLAEQDQN 440 RG E ++ L ++ +N Sbjct: 416 KRGTEEQL---LHDWEKRSKN 433 >UniRef50_Q6MPI4 ATPase, AAA family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPI4_BDEBA Length = 449 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 173/442 (39%), Positives = 258/442 (58%), Gaps = 6/442 (1%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 M S + + PL+ +RP+ L GQQ L L + + G+L S+I+WGPPG Sbjct: 13 MDLFSASQASHGTSPLSEILRPKTLDDIFGQQKTLGPQSKLGQMLRKGYLPSLIIWGPPG 72 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFN 119 TGKTT A ++++ NA ++AV SG K +RE E + R ++ ILFVDE+HRFN Sbjct: 73 TGKTTFALALSQHFNAHYVHLNAVDSGAKALREVGEAGKDRRLQYQQKTILFVDEIHRFN 132 Query: 120 KSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 K+QQD LP +E G + +GATTENPS+ELN ALLSR RV + + LS +D+ +++ +A Sbjct: 133 KAQQDVLLPFVEKGDLVLVGATTENPSYELNRALLSRCRVVIFERLSEDDLNKIVKRAET 192 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 + +L ++ + + E +GDARR +N+LE++ + + G +L + E Sbjct: 193 HYAKPLDK---ILTEDAHKNLLEYSDGDARRLINSLEILYTFTKDEVEGP-LLDVNDMRE 248 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + + +D + YD ISA KS+RGS PDAA+Y+ AR++ G DP+++ARR + +A Sbjct: 249 LLQQNPLGYDKNSEMHYDTISAFIKSIRGSDPDAAMYYLARMLDGGEDPVFIARRLIILA 308 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SED+GNADPRA+ VAIA +G EG ++Q YLA PKSNA Y A A Sbjct: 309 SEDIGNADPRAISVAIAGLQAVEAIGLPEGAITLSQVTTYLASCPKSNASYMALHKAREL 368 Query: 360 ARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 + VP+HLR+A T L K++GYG++Y+Y H+ + + Y P E+ +T Y PT Sbjct: 369 VEKTRTLPVPLHLRSAKTALAKDLGYGRDYKYPHNYPTGWV-EQSYLPEEVEKTAIYEPT 427 Query: 420 NRGLEGKIGEKLAWLAEQDQNS 441 RG E I + L+W+ + Sbjct: 428 TRGFEKNIRDYLSWMKLKKDKE 449 >UniRef50_O13984 ATPase WRNIP1 homolog C26H5.02c n=1 Tax=Schizosaccharomyces pombe RepID=WRIP1_SCHPO Length = 504 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 172/429 (40%), Positives = 247/429 (57%), Gaps = 11/429 (2%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 + +PLA R RP++L +Y+GQ+ L+ + IE +SMILWG GTGKT Sbjct: 75 KTKLTRRDTRPLAERARPKSLDEYVGQEELVGERGIIRNLIEQDRCNSMILWGSAGTGKT 134 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQ 123 TLA +IA + ISA ++ V + R+ E ++ GR+TI+F+DEVHRFN++QQ Sbjct: 135 TLARLIAVTTKSRFIEISATSTTVADCRKIFEDSQNYLTLTGRKTIIFLDEVHRFNRAQQ 194 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLP +E G +T IGATTENPSF LNSAL+SR V++LK L+ ++++++L A ++ Sbjct: 195 DIFLPMVEKGLVTLIGATTENPSFRLNSALISRCPVFVLKKLTRDNVKKILNHACLLESE 254 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 G + I+ + +GDAR ALN LEM M + L E + + Sbjct: 255 RLGSSMPNVETSIIDYISAITDGDARMALNALEMSIGMLR-----QGPLSLEDIKDKLVR 309 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 SA +D GD YD ISA HKSVRGS DA LY+ R++ +G DPLYVARR + IASED+ Sbjct: 310 SSALYDRVGDVHYDTISAFHKSVRGSDVDATLYYLGRMLESGEDPLYVARRMVRIASEDI 369 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G AD + +A + + +VG E + +A V LA APKS VY ++ A + Sbjct: 370 GIADNSMLPLASSTFTAVQQVGMPEADVILAHCAVALALAPKSVDVYRSYNAVKSFLSSH 429 Query: 364 PD---YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF-PT 419 PD ++P+H+RNAPT LMK++GY + Y+Y D + + Y P I T++Y P Sbjct: 430 PDAGRAEIPMHIRNAPTNLMKQLGYHKGYKYNPDYKDGLV-MQEYLPDSIKGTKFYKLPI 488 Query: 420 NRGLEGKIG 428 + +I Sbjct: 489 ELKEDEEIK 497 >UniRef50_UPI0001C42F86 recombination factor protein RarA n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42F86 Length = 422 Score = 506 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 158/428 (36%), Positives = 244/428 (57%), Gaps = 7/428 (1%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 +PLA RMRP+ + IGQ HL+ GK L R ++ G L SMIL+GPPG GKT++A I Sbjct: 1 MKKEPLAYRMRPKKIEDIIGQSHLVGDGKLLRRMVDVGQLSSMILYGPPGVGKTSIATAI 60 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A + + ++AV K++ A+ A+ + I+ +DEVHR +K++QD LPH+ Sbjct: 61 AGSTDTPFKLLNAVVHNKKDMEIAVAEAKMHGQL----IVILDEVHRLDKAKQDFLLPHL 116 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G I IGATT NP +N A+ SR +++ L+SL+ +DI+ L +A+++ G+G + I Sbjct: 117 EKGLIILIGATTANPYHSINPAIRSRCQIFELESLTPDDIKTALIRAIQNPESGFGKEQI 176 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + ++ +A + GD R ALN LE+ + G + + E ++S D Sbjct: 177 EMEEDAISHLAHMCGGDVRSALNALELAVKSTFATEDGIKHISLETAESCIQKKSFHHDK 236 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 GD YD++SA KS+RGS +A L++ AR++ AG D +ARR L I+ ED+G A+P+A Sbjct: 237 DGDAHYDVLSAFQKSIRGSDVNAGLHYLARLLEAG-DLTSIARRLLVISYEDIGLANPQA 295 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 +AA + R+G E ++ A+V L +PKSN+ Y A AA+AD R DVP Sbjct: 296 GVRTLAAIESAERLGMPEARIPLSNAVVELCLSPKSNSAYKAIDAAIADIRGGASGDVPK 355 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG-LEGKIGE 429 HL++A K K +G G EY+Y HD + + + Y P ++ + RYY P G E + + Sbjct: 356 HLKDAHYKGAKALGRGVEYQYPHDFDHGWVKQQ-YLPDKLKKARYYEPKRTGKFEQALAD 414 Query: 430 KLAWLAEQ 437 L ++ Sbjct: 415 IYDKLDQR 422 >UniRef50_O48696 F3I6.23 protein n=4 Tax=Embryophyta RepID=O48696_ARATH Length = 525 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 189/419 (45%), Positives = 256/419 (61%), Gaps = 9/419 (2%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 S QPL+ RMRP L +GQ HLL+ L A+E+ L S++ WGPPGTGKT+ Sbjct: 93 SSSSHRQHQPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTS 152 Query: 66 LAEVIARYAN----ADVERISAVTSGVKEIREAIERARQNRNAGR-RTILFVDEVHRFNK 120 +A+ + + +SAVTSGVK++R+A+E A++ GR RT+LF+DEVHRFNK Sbjct: 153 IAKSLINSSKDPSLYRFVSLSAVTSGVKDVRDAVESAKRLNLEGRKRTVLFMDEVHRFNK 212 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQD FLP IEDG+I FIGATTENPSF L + LLSR RV L L +E +L +A++D Sbjct: 213 SQQDTFLPVIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRAVDD 272 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 RG + + D +A +GDAR ALN LE+ A MA V+ + E Sbjct: 273 SERGLPN-SVEVDDSVIEFLANNCDGDARVALNALEISATMATTRAGTDAVVSIDDAKEA 331 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 + +D G++ Y+LISALHKS+RG +AA+YW AR++ G +PLY+ARR + AS Sbjct: 332 LQCKHLAYDKAGEQHYNLISALHKSMRGGDANAAIYWLARMLEGGEEPLYIARRLIRFAS 391 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 ED+G ADP A+ A+A + +G E +AQ YLA APKS AVY A AA Sbjct: 392 EDIGLADPSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSIAVYRAIGAAQKVV 451 Query: 361 RE--RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 ++ + VP+HLRNAPTKLMKE+GYG+EY Y + ++ AAG+ Y PP + ++ Sbjct: 452 KDSVGQNEGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSS-AAGQTYLPPSLLHHKFLE 509 >UniRef50_Q96S55 ATPase WRNIP1 n=37 Tax=Metazoa RepID=WRIP1_HUMAN Length = 665 Score = 506 bits (1303), Expect = e-142, Method: Composition-based stats. Identities = 169/439 (38%), Positives = 244/439 (55%), Gaps = 37/439 (8%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA-- 71 +PLA MRP+ L Y GQ + L +E + S+ILWGPPG GKTTLA +IA Sbjct: 225 KPLADTMRPDTLQDYFGQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASN 284 Query: 72 -RYANADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNKSQQDAFLPH 129 + + +SA + ++R+ I++A+ ++ +R ILF+DE+HRFNKSQQD FLPH Sbjct: 285 SKKHSIRFVTLSATNAKTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQDTFLPH 344 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA------------ 177 +E GTIT IGATTENPSF++N+ALLSR RV +L+ L E + +L +A Sbjct: 345 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAMVTILMRAINSLGIHVLDSS 404 Query: 178 -----MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM----------- 221 + + + + D+ +A L +GDAR LN L++ Sbjct: 405 RPTDPLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARAGLNGLQLAVLARLSSRKMFCKK 464 Query: 222 -AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + + ++ + E +D G+ Y+ ISALHKS+RGS +A+LYW AR Sbjct: 465 SGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDQNASLYWLAR 524 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DPLYVARR + ASED+G ADP A+ A+AA+ +G E E +AQ +VY Sbjct: 525 MLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGCHFIGMPECEVLLAQCVVYF 584 Query: 341 ACAPKSNAVYTAFKAALADAR--ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS VY+A+ A R + P VP+HLRNAPT+LMK++GYG+ Y+Y + Sbjct: 585 ARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRLMKDLGYGKGYKYNPMYSE- 643 Query: 399 YAAGEVYFPPEIAQTRYYF 417 + Y P E+ ++ Sbjct: 644 -PVDQEYLPEELRGVDFFK 661 >UniRef50_UPI000192574D PREDICTED: similar to Werner helicase interacting protein 1 n=1 Tax=Hydra magnipapillata RepID=UPI000192574D Length = 527 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 168/422 (39%), Positives = 239/422 (56%), Gaps = 15/422 (3%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 PLA +MRP N + GQ A L + + S+ILWGPPG GKT+ A +I+R Sbjct: 109 IPLAEQMRPNNFDNFYGQNS-FGAKNLLKELFVSNKIPSLILWGPPGCGKTSFAHIISRR 167 Query: 74 AN-----ADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFL 127 +SA +G+ ++++ I+ A+ + R+T+LF+DE+HRFNK QQD FL Sbjct: 168 CKESDSKYRFVTLSATMAGINDVKDEIKVAKNEKKLTSRKTVLFIDEIHRFNKMQQDTFL 227 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 P++EDGTI IGATTENPSF +N+AL+SR V + SL TE I ++L A+E Sbjct: 228 PYVEDGTIVLIGATTENPSFYINNALISRCHVVVFNSLETEVILKILQNAIELLNETDQE 287 Query: 188 -QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD---DSGKRVLKPELLTEIAGE 243 + +A+ NGDAR ALN L+M+ + + EL+ E Sbjct: 288 VAKCRFEEGALNLVAQYANGDARCALNKLDMILQAKKESIHVSQANSQISCELIREELQR 347 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 +D GD Y+LISALHKS+RGS DA++YW AR++ G PLY+ARR + IASED+ Sbjct: 348 CCVNYDKAGDEHYNLISALHKSIRGSDVDASIYWLARMLEGGEKPLYIARRLIRIASEDI 407 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE- 362 G AD A+ A++A+ +G E + +AQ +VYLA APKS AVY A+K A + Sbjct: 408 GLADSNALPQAVSAYQACHFIGMPECDIILAQVVVYLANAPKSIAVYEAYKNAKDFIKNC 467 Query: 363 -RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 +VP+HLRNAPTKLM+ +GYG++Y+Y + Y P + +++ T Sbjct: 468 SGSQPEVPLHLRNAPTKLMENLGYGKDYKYTPLFKED--PMQEYLPKSMLGKKFFNATEE 525 Query: 422 GL 423 G Sbjct: 526 GN 527 >UniRef50_D0LV62 AAA ATPase central domain protein n=6 Tax=cellular organisms RepID=D0LV62_HALO1 Length = 463 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 195/435 (44%), Positives = 265/435 (60%), Gaps = 9/435 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA RMRP++L +++GQ HLL K L R L S+ILWGPPGTGKTTLA ++A Sbjct: 15 QPLAERMRPKSLQEFVGQNHLLGPRKLLARLGPGAALPSLILWGPPGTGKTTLAHILATR 74 Query: 74 ANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 A + + ISAVT+GV+E+R+ + A R G RT+LF+DE+HRF+K+QQDA LPH+E Sbjct: 75 AGSRLAAISAVTAGVREMRQLVSEAGDRRDQFGSRTVLFIDEIHRFSKAQQDALLPHVEA 134 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GT+T IGATTENPSF +N+ALLSR RV L +LS E++ + +A+ D+ RG G + + Sbjct: 135 GTVTLIGATTENPSFHVNAALLSRCRVLRLGALSDEELGALARRALSDRERGLGRAAVSV 194 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADM-------AEVDDSGKRVLKPELLTEIAGERS 245 DE + GDARR LN LE+ + E +D R L E + E +++ Sbjct: 195 SDEVLTDLVAQSGGDARRMLNALEVAVSLVRGGEGEGEDEDEAPRALGREAIEEALQQKT 254 Query: 246 ARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGN 305 +D GD + ++SA KS+RGS PDAA YW R++ AG DPL+V RR + ASED+GN Sbjct: 255 LLYDKAGDEHFGVVSAFIKSMRGSDPDAAAYWMTRMLEAGEDPLFVLRRMVVFASEDIGN 314 Query: 306 ADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD 365 ADP+A+ VA +A + +G EG + QA VY+ACAPKSN T + AA R+ Sbjct: 315 ADPQALAVATSALSAYQFLGMPEGVLPMTQAAVYMACAPKSNTALTTYAAARRAVRQHGA 374 Query: 366 YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 VP LRNA L +EMG+ ++YRY H+ A Y E Y P + R+Y P G E Sbjct: 375 LPVPKKLRNANNALDREMGHAKDYRYPHNFAGHYVP-ETYLPEGLEGARFYEPAESGAER 433 Query: 426 KIGEKLAWLAEQDQN 440 +GE++A Sbjct: 434 AMGERVARWRAVVAG 448 >UniRef50_D0N7J3 ATPase WRNIP1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N7J3_PHYIN Length = 499 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 182/420 (43%), Positives = 243/420 (57%), Gaps = 10/420 (2%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 D + PLA RMRP +L +GQ+ LL G L IEA + +MILWGPPG GKTT Sbjct: 76 TATDDASAVPLAERMRPTDLNDLVGQEELLGPGSLLSTLIEADRVPNMILWGPPGCGKTT 135 Query: 66 LAEVIARYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQD 124 LA VI++ +S TS ++++A++RAR + + RRTI+FVDE+HRFNK QQD Sbjct: 136 LAHVISKKTGCKFISLSGATSKAGDMKDAVDRARGERKMFRRRTIVFVDEIHRFNKIQQD 195 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 FLP +EDGTIT IGATTENPSFE+N+ALLSR RVY LK + E IE++L +A+ Sbjct: 196 FFLPPVEDGTITLIGATTENPSFEVNNALLSRCRVYSLKKHTPESIERILRRALT----A 251 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR-VLKPELLTEIA-G 242 DE + + GDAR ALN LEM A +D + + + Sbjct: 252 GDQMSFEAEDEAIKYLTTQCAGDARAALNCLEMAIQTAPIDPDKRVLRVSAIHVQHCFAH 311 Query: 243 ERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 ++ +D D YD+ISALHKS+RGS +A LYW AR++ G +PLYVARR + +ASED Sbjct: 312 RQTLFYDRNADMHYDVISALHKSIRGSDENATLYWLARMLEGGENPLYVARRLIRVASED 371 Query: 303 VGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR- 361 VG A P + +A++A+ G E + +A LA APKS VY A+K A Sbjct: 372 VGLAAPELLPLAVSAYQAAHFTGMPECDVVLAHVATMLARAPKSIEVYAAYKRAKQSIHD 431 Query: 362 --ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT 419 + DVP+H+RNAPTKLMKEMGY + Y+Y + Y P E+ T ++ Sbjct: 432 WGKGALPDVPMHIRNAPTKLMKEMGYAKGYKYNPHYTAEELKDQTYLPDEMVDTNFFEDA 491 >UniRef50_A6QR70 Werner helicase interacting protein 1 n=6 Tax=Amniota RepID=A6QR70_BOVIN Length = 638 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 171/439 (38%), Positives = 243/439 (55%), Gaps = 37/439 (8%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA MRP+ L ++GQ + L +EA + S+ILWGPPG GKTTLA +IA Sbjct: 198 KPLADTMRPDALQDFVGQGRAVGPETLLRSLLEASEVPSLILWGPPGCGKTTLAHIIANN 257 Query: 74 ANAD---VERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNKSQQDAFLPH 129 + +SA ++ ++R+ I++A+ + +R ILF+DE+HRFNKSQQD FLPH Sbjct: 258 SKKHSIRFVTLSATSAKTTDVRDVIKQAQNEKRFFKRKTILFIDEIHRFNKSQQDTFLPH 317 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA------------ 177 +E GTIT IGATTENPSF++N+ALLSR RV +L+ L E + +L +A Sbjct: 318 VECGTITLIGATTENPSFQVNAALLSRCRVIVLEKLPVEAVVTILMRAVNSLGIQVLDSS 377 Query: 178 -----MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM----------- 221 + +++ D+ +A L +GDAR LN L++ Sbjct: 378 RPADPLSHGGNSSSESSVLIEDKAVDTLAHLSDGDARAGLNGLQLAVLARLSARKTFGKK 437 Query: 222 -AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + + ++ + E +D G+ Y+ ISALHKS+RGS AALYW R Sbjct: 438 GGQSYPPSRVLVTESDVKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDSSAALYWLGR 497 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DPLYVARR + ASEDVG ADP A+ A+A + +G E E +AQ +VYL Sbjct: 498 MLEGGEDPLYVARRLVRFASEDVGLADPSALTQAVATYQGCHFIGMPECEVLLAQCVVYL 557 Query: 341 ACAPKSNAVYTAFKAALADAR--ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS VY+A+ A R + P VP+HLRNAPT+LMK++GYGQ Y+Y + Sbjct: 558 ARAPKSVEVYSAYNNVKACLRGHQGPLPPVPLHLRNAPTRLMKDLGYGQGYKYNPAYSE- 616 Query: 399 YAAGEVYFPPEIAQTRYYF 417 + Y P E+ ++ Sbjct: 617 -PVEQEYLPQELRGVDFFK 634 >UniRef50_C8WLQ0 AAA ATPase central domain protein n=3 Tax=Coriobacteriaceae RepID=C8WLQ0_EGGLE Length = 446 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 183/452 (40%), Positives = 248/452 (54%), Gaps = 11/452 (2%) Query: 1 MSNLSLDFS---DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWG 57 M L + + PLA RMRP L + +GQ + G L AIE L S+IL+G Sbjct: 1 MDTLFTEMENERKSEVAPLAVRMRPRTLEEVVGQDEAVGPGSWLRNAIEQDQLSSVILFG 60 Query: 58 PPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERA-RQNRNAGRRTILFVDEVH 116 P GTGKT+LA VIA A +SA+ V ++R I+ A ++ G RTILFVDE+H Sbjct: 61 PAGTGKTSLAHVIAETTKATFVEVSAIGGTVSDLRREIDAADKRLSAFGLRTILFVDEIH 120 Query: 117 RFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 RFN+SQQDA L +ED + +GATTENP FE+NSAL+SR+RV L LS E+I ++ + Sbjct: 121 RFNRSQQDALLHAVEDRVLVLVGATTENPFFEVNSALISRSRVVELHGLSDEEIVSLVER 180 Query: 177 AMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE-VDDSGKRVLKPE 235 A+ D+ G L + R AI L GD R AL TLE+ A M + + + Sbjct: 181 ALADERGLGGRY--RLDAKARDAIVLLAGGDGRAALTTLELAAGMVQPGTSKKPAKITED 238 Query: 236 LLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC 295 + RS +D D YD+ISA KS+RGS PDAALYW AR+I G DP ++ARR Sbjct: 239 NVRAATPHRSLPYDKNKDMHYDVISAFIKSMRGSDPDAALYWLARMIDGGEDPKFIARRM 298 Query: 296 LAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKA 355 ASED+GNADP+A+ +A AA+ +G E +AQA +YLA APKSNA A Sbjct: 299 FIAASEDIGNADPQALLIAEAAFKSAEVIGYPECRINLAQAAIYLALAPKSNAAEAGIDA 358 Query: 356 ALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 AL + R P +VP HLR+ + G EY+Y H + + + + Y P + + + Sbjct: 359 ALNEVRNGPSRNVPDHLRDRHRPGSENYG---EYKYPHSYPSGWVS-QRYLPDGLERGCF 414 Query: 416 YFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR 447 Y ++RG E + A +P R R Sbjct: 415 YRSSDRGWEAYRSDTFARDRLDSGENPTSRGR 446 >UniRef50_B9HZJ7 Predicted protein n=3 Tax=rosids RepID=B9HZJ7_POPTR Length = 553 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 184/422 (43%), Positives = 243/422 (57%), Gaps = 21/422 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA RMRP + IGQ LL+ L AI + S+ILWGPPGTGKT++A I Sbjct: 126 EPLAERMRPRTIDDVIGQDLLLSQNSLLRSAIRCSRIPSIILWGPPGTGKTSIARAIVTS 185 Query: 74 AN------ADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAF 126 AN +SAVT GVK+ R+A E AR +RT+LF+DEVHRFNKSQQD+F Sbjct: 186 ANSQGSSSYRFVSLSAVTCGVKDARDAFEDARKFKLKNSKRTVLFLDEVHRFNKSQQDSF 245 Query: 127 LPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY- 185 LP IEDGTI FIGATTENPSF L + LLSR RV L L ++ +L +A+ D +G Sbjct: 246 LPVIEDGTIVFIGATTENPSFHLVTPLLSRCRVLTLSPLKPHHVQTILKRAVNDPDKGLS 305 Query: 186 ---GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV-----LKPELL 237 G + + ++ ++ +GDAR ALN LE+ A A + + Sbjct: 306 KSLGSLGVDVSEDAVEFLSTNCDGDARVALNALEISAATAAARVGSDGDLRLASVALDDA 365 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E + +D G+ Y+LISALHKS+RGS DA++YW R++ G PLY+ARR + Sbjct: 366 KEALQSKHLAYDRAGEEHYNLISALHKSMRGSDADASIYWLVRMLEGGEQPLYIARRLVR 425 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVG ADP A+ A+A + +G E +AQ + YLA APKS +VY A AA Sbjct: 426 FASEDVGLADPLALNQAVACYQACHFLGMPECNVILAQCVAYLALAPKSISVYRAMGAAQ 485 Query: 358 ADARE--RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 RE + VP+HLRNAPTKLMKE+GYG++Y Y D A + + PP + ++ Sbjct: 486 KVVRESVGQNEGVPLHLRNAPTKLMKELGYGKDYIYTPDNPTA---NQSFLPPSLQGYKF 542 Query: 416 YF 417 Sbjct: 543 LD 544 >UniRef50_C0X719 Crossover junction endodeoxyribonuclease n=29 Tax=Bacteria RepID=C0X719_ENTFA Length = 425 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 163/429 (37%), Positives = 244/429 (56%), Gaps = 7/429 (1%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA RMRP +L + +GQQHL+ GK + R +EA L SMIL+GPPGTGKT++A IA Sbjct: 3 QPLAYRMRPRHLDEVVGQQHLVGPGKIIRRMVEAKMLSSMILYGPPGTGKTSIASAIAGS 62 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N ++A T K+++ E A+ + IL +DE+HR +K++QD LPH+E+G Sbjct: 63 TNYAFRMLNAATDTKKDLQIVAEEAKMSGT----VILLLDEIHRLDKTKQDFLLPHLENG 118 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATTENP +N A+ SR +++ +K L+ DI+Q + +A+ D TRG G + L Sbjct: 119 RIIMIGATTENPYITINPAIRSRTQIFEVKPLTETDIQQAIQEALTDSTRGLGDYPVHLE 178 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 ++ + + NGD R ALN LE+ ++ G+ + ++ E ++ D GD Sbjct: 179 EKALQHLTRATNGDLRSALNGLELAVKSTPKNEQGEIKITLPIIEECVQRKALTHDKDGD 238 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD+ISA KS+RGS DAAL++ R++ AG D + RR + IA ED+G +P A Sbjct: 239 AHYDVISAFQKSIRGSDVDAALHYLGRLVEAG-DLPIICRRLMVIAYEDIGLGNPAAAAR 297 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 + A ++G E +A ++ L +PKSN+ TA AALAD R+ DVP HLR Sbjct: 298 TVTAVQAAEKLGFPEARIPLASVVIDLCLSPKSNSAVTAIDAALADIRQGSVGDVPDHLR 357 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG-LEGKIGEKLA 432 +A KE+ G Y+Y H+ N + + Y P ++ + RYY P + G E + ++L Sbjct: 358 DAHYAGAKELNRGIGYQYPHNFENGWVNQQ-YLPDKLKEARYYEPIDIGKYEQALHQQLK 416 Query: 433 WLAEQDQNS 441 + E Q Sbjct: 417 RIQEWKQKK 425 >UniRef50_C6NSC7 ATPase, AAA family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NSC7_9GAMM Length = 437 Score = 499 bits (1286), Expect = e-140, Method: Composition-based stats. Identities = 208/438 (47%), Positives = 288/438 (65%), Gaps = 3/438 (0%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 + + +PLAARMRP +LA++IGQ+ LL P+ + LHS++ WGPPG GKTTLA Sbjct: 1 MTGSDSRPLAARMRPRSLAEFIGQERLLGPAGPIAAMLRQKSLHSLVFWGPPGVGKTTLA 60 Query: 68 EVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFL 127 ++A A+V +SAV SGV+E+R A A + R G T+LF+DE+HRFNK+QQDA L Sbjct: 61 HLLAAEQGAEVLTLSAVDSGVRELRAAAAVATERRGRGESTVLFIDEIHRFNKTQQDALL 120 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 PH+E+GT+T IGATTENPSF L ALLSR R+Y+L+ L E + +L +++ D+ RG G Sbjct: 121 PHLEEGTLTLIGATTENPSFALVGALLSRIRIYVLEPLGQEALAAILERSLHDRERGLGD 180 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + LPD R + +GDARR LN L++ +A + G+R L +L AG+ Sbjct: 181 LAVELPDSARAQLLAQADGDARRLLNILDLAVQLAPLH-DGRRRLDTPVLAAAAGQAWRH 239 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 FD G+ FYD ISALHKS+RGS DA+LYW AR++ G DPLY+ARR + +A EDVG AD Sbjct: 240 FDKGGEHFYDEISALHKSLRGSDVDASLYWLARMLDGGADPLYLARRLIRVAVEDVGLAD 299 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 PRA+++A+AA F +G EGE A+A+A VYLA PKSN Y+A+K R +P + Sbjct: 300 PRALEIALAARAAFQALGSPEGELALAEAAVYLASCPKSNRTYSAWKKVQEAIRRQPSHP 359 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTR--YYFPTNRGLEG 425 VP+HLRNAPTKL+K++ YG++Y+Y HD +A A + Y P +A +Y + RG E Sbjct: 360 VPLHLRNAPTKLLKDLDYGRDYQYDHDFPDAIAPAQTYLPEALAGLSGPWYQASERGFEQ 419 Query: 426 KIGEKLAWLAEQDQNSPI 443 ++GE+L W+A + Sbjct: 420 RMGERLRWIAAHRKGPGD 437 >UniRef50_O34528 Uncharacterized AAA domain-containing protein yrvN n=349 Tax=cellular organisms RepID=YRVN_BACSU Length = 421 Score = 499 bits (1285), Expect = e-140, Method: Composition-based stats. Identities = 163/427 (38%), Positives = 242/427 (56%), Gaps = 7/427 (1%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA RMRP + IGQQHL+A K + R ++A HL SMIL+GPPG GKT++A IA Sbjct: 1 MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAG 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +++AV + K++ E + A++ + +G+ IL +DEVHR +K +QD LP++E+ Sbjct: 61 STSIAFRKLNAVINNKKDM-EIV--AQEAKMSGQ-VILILDEVHRLDKGKQDFLLPYLEN 116 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G I IGATT NP +N A+ SR +++ L+ L+ E I+Q L +A+ D+ RG G + + Sbjct: 117 GMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALERALHDEHRGLGTYSVSI 176 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ A GD R ALN LE+ + G+ + E E ++S D G Sbjct: 177 DDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDG 236 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD++SA KS+RGS +AAL++ AR+I AG D +ARR L IA ED+G A P+A Sbjct: 237 DAHYDVLSAFQKSIRGSDANAALHYLARLIEAG-DLESIARRLLVIAYEDIGLASPQAGP 295 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + A RVG E +A A++ L +PKSN+ A ALAD R DVP HL Sbjct: 296 RVLNAIQTAERVGFPEARIPLANAVIELCLSPKSNSAILAIDEALADIRAGKIGDVPKHL 355 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG-LEGKIGEKL 431 ++A K +E+G G +Y+Y H+ N + + Y P + +YY P G E + + Sbjct: 356 KDAHYKGAQELGRGIDYKYPHNYDNGWVEQQ-YLPDPLKNKQYYKPKQTGKFESALKQVY 414 Query: 432 AWLAEQD 438 L ++ Sbjct: 415 DKLMKRK 421 >UniRef50_A4E6Q7 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4E6Q7_9ACTN Length = 454 Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 185/457 (40%), Positives = 257/457 (56%), Gaps = 22/457 (4%) Query: 1 MSNLSL-DFSDNTFQ--PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWG 57 M +L + +F+ PLA RMRP +L +Y+GQQ + G L AIE L S+IL+G Sbjct: 6 MDDLFSASTRERSFKNAPLAVRMRPNSLDEYVGQQKAVGKGSWLRAAIEHDVLSSVILYG 65 Query: 58 PPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVH 116 P GTGKTTLA +IA + ++ +SAVT VK++R I+ A+ RRTILF+DE+H Sbjct: 66 PAGTGKTTLAHIIANHTKSEFVEVSAVTGTVKDLRRVIDEAKTRLNTYDRRTILFIDEIH 125 Query: 117 RFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 RF+KSQQDA L +E+ T+ IGATTENP FE+NSALLSR RV L+ L EDI ++ + Sbjct: 126 RFSKSQQDALLHAVENRTVIMIGATTENPYFEVNSALLSRGRVVELEHLKDEDIATLIER 185 Query: 177 AMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR------ 230 A+E G ++T + I L GDAR AL TLE+ +++A + Sbjct: 186 ALEAPQGLNG--KFSADEDTAKTICTLAAGDARSALTTLELASEIAVTRPDTEGTPAPAA 243 Query: 231 ----VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 + + + R +D GD YD+ISA KS+RGS PDA +YW AR+I AG Sbjct: 244 GERYPITVDDVKIANPRRGFTYDKNGDMHYDIISAFIKSMRGSDPDATVYWLARMIDAGE 303 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 DP ++ARR + ASEDVGNADP+A+ VA AA+ +G E +AQA +Y+ APKS Sbjct: 304 DPKFIARRIMIHASEDVGNADPQALLVAHAAFKSAEVIGYPECRINLAQAALYVCLAPKS 363 Query: 347 NAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYF 406 NA + AALAD +VP +LR+ E G Y+Y HD + + Y Sbjct: 364 NACEASIDAALADIHSSGLREVPSYLRDRHRPGSDEYGV---YKYPHDYPEGWV-DQRYL 419 Query: 407 PPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPI 443 P + + ++ P RG E E+ ++ N+P Sbjct: 420 PEGLERGAFWQPAGRGWEEWRVEQSE--RDRSGNAPK 454 >UniRef50_B6HVW8 Pc22g06370 protein n=36 Tax=cellular organisms RepID=B6HVW8_PENCW Length = 539 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 168/411 (40%), Positives = 240/411 (58%), Gaps = 12/411 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP+ L + GQ+ L+ L IE + SMILWG GTGKTT+A VIA Sbjct: 123 PLAERMRPKTLEEVCGQE-LVGPNGILRGLIEQDRVPSMILWGSAGTGKTTIARVIASLV 181 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + I++ +SGV E ++ AR GR+TI+F DE+HRF+KSQQD FL +E G Sbjct: 182 GSRFVEINSTSSGVAECKKIFAEARSELGLTGRKTIIFCDEIHRFSKSQQDVFLGPVESG 241 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T IGATTENPSF++ +ALLSR R + L L+ EDI +L +A++ + Y ++ + Sbjct: 242 QVTLIGATTENPSFKVQNALLSRCRTFTLAKLTDEDIISILHRALQVEGPSYSPSEL-VD 300 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +E + +A +GDAR +LN LE+ D+++ K LK L ++ +D GD Sbjct: 301 EELIQYLARFADGDARTSLNLLELAMDLSKRAGMDKEDLKRSL------TKTLVYDRAGD 354 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD ISA HKS+RGS PDAALY+ AR+I +G DPLY++RR + +ASED+G AD + + Sbjct: 355 QHYDTISAFHKSIRGSDPDAALYYLARMIQSGEDPLYISRRLIVVASEDIGLADNTMLSL 414 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD--YDVPVH 371 AI+ ++G E +A A V +A + KS Y A E +P+H Sbjct: 415 AISTHSAVEKIGLPEARINLAHATVAMALSKKSTRAYRGLNNVFAALNEPGIAGLPIPIH 474 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 LRNAPTKLMKE+GYG EY+Y + + + Y P ++ + + G Sbjct: 475 LRNAPTKLMKELGYGAEYKYNPNYVDGKV-QQDYLPEQLLGRTFLEDLDLG 524 >UniRef50_C6D7W1 AAA ATPase central domain protein n=2 Tax=Bacillales RepID=C6D7W1_PAESJ Length = 436 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 170/425 (40%), Positives = 252/425 (59%), Gaps = 7/425 (1%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA RMRPE L YIGQ+H++ AGK L RAIE + S++L+GPPG GKTTLA +I++ Sbjct: 17 LADRMRPETLDDYIGQEHIIGAGKLLRRAIEGDQVSSILLYGPPGCGKTTLANIISKRTA 76 Query: 76 ADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + +++AV + VK++RE I+ A+ G++TILF+DEVHRFN S+QDA LP +E G Sbjct: 77 GEFVKLNAVDASVKDVREVIDTAKTNKLMYGKKTILFLDEVHRFNTSRQDALLPAVEQGI 136 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 I FIGATTENP +N ALLSR+ ++ L+ L+ + + + +A+ DK RG G + + Sbjct: 137 IIFIGATTENPFHHVNGALLSRSTLFQLEPLNEKHALEAMKRALTDKDRGLGFMTLHAEE 196 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 E + IA + GD RRALN LE+ A + G + E+ E + + R D Sbjct: 197 EALQHIAAMAGGDIRRALNALELAAVTTPSEPDGSVRITMEVAQESIRKPTVRADTSTQ- 255 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITA-GGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD++SA HKS+RGS+ DAAL+W+ + G DP+ RR + SED+G A+P+AM Sbjct: 256 -YDVLSAFHKSIRGSS-DAALFWFLYAVEKLGMDPMTFLRRLIVACSEDIGLANPQAMVQ 313 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A+ A D + ++G E + IAQAI++ +PKSNA A A++ +VP+HLR Sbjct: 314 AVTAMDAYHKIGWPEAKYNIAQAILFAVESPKSNAAAVAIGKAMSVIEGAGQAEVPLHLR 373 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + K +++G+ + Y+Y HD Y + Y P + Y T +G+EGKI + Sbjct: 374 DTHYKGAQQLGH-EGYKYPHDYPGHYVNQQ-YLPDNLKGVTIYKATEQGMEGKIRQNQEL 431 Query: 434 LAEQD 438 + Sbjct: 432 RQRKK 436 >UniRef50_Q2J818 Recombination protein MgsA n=12 Tax=Bacteria RepID=Q2J818_FRASC Length = 519 Score = 496 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 187/452 (41%), Positives = 259/452 (57%), Gaps = 28/452 (6%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLAAR+RP L + +GQ+HLL G PL R +E G S++LWGPPGTGKTTLA +++R Sbjct: 52 PLAARLRPRTLDEVVGQRHLLGPGSPLRRLVEGGATTSVVLWGPPGTGKTTLAHIVSRAT 111 Query: 75 NADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 +SAVT+GVK++R I+ AR+ +G RT+LF+DEVHRF ++QQDA LP +E G Sbjct: 112 GRRFRELSAVTAGVKDVRAVIDEARETLSTSGARTVLFIDEVHRFTRTQQDALLPSVERG 171 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T + ATTENP F + S LLSR+ + L+ L+ +DI VLT+A+ D G + + Sbjct: 172 WVTLVAATTENPFFSVVSPLLSRSLLLTLEPLTDDDIRGVLTRALRDPRGYDGR--LSVS 229 Query: 194 DETRRAIAELVNGDARRALNTLEM-MADMAEVDDSGKR---------------------- 230 DE R + L GDARRAL TLE + E + Sbjct: 230 DEAREHVVRLAGGDARRALTTLEAGAEALLEAHECESGPGGKAGAGADAGADAEAFVNPR 289 Query: 231 -VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPL 289 L +LL + R+D GD+ YD+ISA KS+RG DAAL++ AR++ AG DP Sbjct: 290 PRLDLDLLERAVNRAAVRYDRSGDQHYDVISAFIKSMRGGDVDAALHYLARMLEAGEDPR 349 Query: 290 YVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV 349 +VARR + +ASED+G ADP A+ VA+AA VG E A+AQA+++LA APKSNAV Sbjct: 350 FVARRMIILASEDIGMADPGALGVAVAASQALEFVGLPEARLALAQAVIHLALAPKSNAV 409 Query: 350 YTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPE 409 A AA +D R VP HLR+A + + +G+G YRY H+ + Y P Sbjct: 410 IRAIDAATSDVRAGRAGPVPAHLRDAHYRGARRVGHGAGYRYPHEAPGNVVRQQ-YPPDG 468 Query: 410 IAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441 + T YY P+ G E + +++ L + Sbjct: 469 LTSTDYYQPSGNGFERRAADRVHELRGVVRGD 500 >UniRef50_A7NI76 AAA ATPase central domain protein n=22 Tax=Bacteria RepID=A7NI76_ROSCS Length = 544 Score = 496 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 215/474 (45%), Positives = 293/474 (61%), Gaps = 39/474 (8%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 + + + + PLAARMRP L +++GQ H++ GK L RAI L S+ILWGPPG+G Sbjct: 10 DTQREEALSRQAPLAARMRPRALDEFVGQDHIVGEGKLLRRAITNDALFSIILWGPPGSG 69 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKS 121 KTTLA +IA +A E++SAV++GV ++R ++ A+ +RTI+F+DE+HRFNK+ Sbjct: 70 KTTLARIIADTTHAHFEQLSAVSAGVADLRRVVKEAQDRLGMFQQRTIVFIDEIHRFNKA 129 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDA LP++EDGTI IGATTENPSFE+N AL SRARV++L+SL+ E I ++ +A+ D Sbjct: 130 QQDAILPYVEDGTIILIGATTENPSFEVNPALRSRARVFVLESLTDEQIGVIVDRALTDA 189 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 RG G +++L + R + + NGDAR ALN LE A GKR+L + + + Sbjct: 190 ERGLGALNVLLAADARGYLINMSNGDARTALNALEAAALAKSPGIGGKRLLTVDDIRDAL 249 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 R+ ++D G+ YD ISALHKSVR S PDAALYW R++ G DPLY+ARR + +A E Sbjct: 250 QSRAVQYDKNGELHYDAISALHKSVRDSDPDAALYWLGRMLDGGEDPLYIARRVVRMAIE 309 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 D+G ADP A+ + IAA +G EG+ A+AQA+VYLA APKSNAVY A+ AAL D Sbjct: 310 DIGMADPHALPLTIAAQQAVHFLGQPEGDLALAQAVVYLAQAPKSNAVYVAYAAALNDVA 369 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAA-------------------- 401 E + VP+HLRNAPT LMK +GY + Y+YAHD+ +A A Sbjct: 370 ETRNEPVPLHLRNAPTALMKRLGYARGYKYAHDDDDAQAETRNEPVPLHLRNAPTALMKR 429 Query: 402 ------------------GEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQ 437 + +FPP + RYY PT RG E + E+LAW + Sbjct: 430 LGYARGYKYAHDDDDAQVEQEHFPPNLRGRRYYEPTGRGFEATVRERLAWRDAR 483 >UniRef50_Q47N55 Recombination protein MgsA n=6 Tax=Bacteria RepID=Q47N55_THEFY Length = 441 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 185/434 (42%), Positives = 258/434 (59%), Gaps = 8/434 (1%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 + + +PLA RMRP L + +GQ+HLL G PL R +E +++LWGPPGTGKTTLA Sbjct: 13 AHRSHEPLAVRMRPRTLDEVVGQRHLLGEGSPLRRLVEDDAPMALLLWGPPGTGKTTLAT 72 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFL 127 V++R +SAVTSGVK+IR+ ++ AR+ G T+LFVDEVHRF+K+QQDA L Sbjct: 73 VVSRATRRRFVELSAVTSGVKDIRDVVDEARRELGMRGVHTLLFVDEVHRFSKTQQDALL 132 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 P +E+ ++FIGATTENP F + S LLSR+ + L + S +DI V+ +A+ D+ G Sbjct: 133 PAVENRWVSFIGATTENPFFSVISPLLSRSLLLTLHAHSDDDIRTVVRRALTDERGLAGR 192 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 L +E + L GDARR+L LE A +A + + + A + R Sbjct: 193 Y--TLTEEALHHLVRLAGGDARRSLTYLEAAALVAG----DRTEITVADVERAADRTAVR 246 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D GD+ YD++SA KS+RGS DAAL++ AR+I AG DP ++ARR + ASEDVG AD Sbjct: 247 YDRSGDQHYDVVSAFIKSMRGSDVDAALHYLARMIEAGEDPRFIARRLVVHASEDVGMAD 306 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 P A+Q A+AA VG E +AQA++++A APKSNAV TA A++D R Sbjct: 307 PTALQAAVAAAQAVELVGLPEARINLAQAVIHIALAPKSNAVITAIDRAISDVRAGKLGP 366 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP HLR++ + ++G+G YRY HD A + Y P + YY PT G E + Sbjct: 367 VPAHLRDSHYRGAADLGHGAGYRYPHDYPGGVVA-QRYLPEGLDGAEYYRPTTHGAERRF 425 Query: 428 GEKLAWLAEQDQNS 441 GE L + + Sbjct: 426 GEVLRRIKGVLRGG 439 >UniRef50_C0R1V7 Holliday junction resolvase helicase subunit-like ATPase n=2 Tax=Brachyspira RepID=C0R1V7_BRAHW Length = 431 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 166/425 (39%), Positives = 254/425 (59%), Gaps = 7/425 (1%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 N F+P+A RMRP + + GQ H+L K L + I+ + SM+ +GPPG GK+T+A +I Sbjct: 9 NNFKPMAERMRPLTIEEVFGQHHILDKNKTLRKMIDNDKITSMVFFGPPGVGKSTVASII 68 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A+ ++ +++AV S V EIREAI++A +N ++TILF+DE+HRFNKSQQDA LP + Sbjct: 69 AKKTKSEYIKLNAVLSNVSEIREAIKKAEKNLENRKKTILFIDEIHRFNKSQQDALLPAV 128 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E+G+I IG+TT NP F LN+ALLSR ++ ++L DI++ + +A+ED RG G D+ Sbjct: 129 ENGSIILIGSTTLNPYFYLNNALLSRIMLFEFRNLDDNDIKEAVLKAIED-KRGLGEYDV 187 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR-VLKPELLTEIAGERSARFD 249 + DE I +GD R+A LE ++D+S ++ + E++ ++ ++S FD Sbjct: 188 DVEDEAVNLIVRYSHGDVRKAFTYLEASYLATQIDESKEKLTITEEIVRDVTSKQSISFD 247 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 D Y+ ISA KSVRGS P+AA+Y+ AR++ +G DP YVARR +ASED+G A+P Sbjct: 248 E--DEHYNTISAFIKSVRGSDPNAAIYYLARMLESGEDPRYVARRLCILASEDIGLAEPN 305 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 AM +A + +G EG +A+ +YLA PKSN+ Y A A+ D R Y +P Sbjct: 306 AMNIASSLVSIIDFIGMPEGRIPLAEVTIYLALCPKSNSAYNAINKAIRDIRNGELYSIP 365 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 +LR+ + +EY+Y HD + Y + YY P + G E ++ + Sbjct: 366 NYLRDNHSATFDRKS-DEEYKYPHDYPYHIVKQD-YLEHGVK-KEYYEPVDIGEERELKK 422 Query: 430 KLAWL 434 + W+ Sbjct: 423 RYEWI 427 >UniRef50_C5RHF7 AAA ATPase central domain protein n=11 Tax=Bacteria RepID=C5RHF7_CLOCL Length = 424 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 232/422 (54%), Gaps = 4/422 (0%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA R+RP+ + + +GQ HL+ K L + IE+ H+ +MI +GPPG GKTT+A +IA+ Sbjct: 1 MKPLADRLRPQVIEEVVGQSHLIGQNKILTKIIESQHIPNMIFYGPPGCGKTTVANIIAK 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 N +++A + K+I+E I + +L++DE+ FNK QQ + L IE+ Sbjct: 61 ATNKRFFKLNATNASTKDIKEIILEL-DTFMGAKGVLLYLDEIQNFNKKQQQSLLEFIEN 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G+IT I +TTENP F + +A+LSR+ V+ K +S++DIE+ L +A+E + I+L Sbjct: 120 GSITLIASTTENPYFYVYNAILSRSNVFEFKMVSSDDIEKALMRAVEVLQNDFKSSKILL 179 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 DE + I+ + GD R+ALN LE+ + + + + FD G Sbjct: 180 EDEALKYISAIAGGDVRKALNALELAV-FSSKAKDNIIKIDINAAYDATQRKIMNFDKDG 238 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD++SA KS+RGS DAA+++ AR+I G D L + RR + IA ED+G A P A+ Sbjct: 239 DGHYDVLSAFQKSIRGSDADAAVHYLARLIRGG-DLLSICRRLMVIACEDIGLAFPSAIS 297 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + + D ++G E +A+A + LA +PKSN+ A +ALAD + D+P HL Sbjct: 298 IVKSCVDSALQLGFPEARIPLAEATILLATSPKSNSAIVAIDSALADIDNKDIGDIPYHL 357 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +++ K +G+G Y Y H N Y + Y P I YY N E I L Sbjct: 358 KDSHYKGADTLGHGVGYLYPHSFENNYVKQQ-YLPDNIKNAIYYKAGNNKFENNIKMYLN 416 Query: 433 WL 434 L Sbjct: 417 KL 418 >UniRef50_C6IZU9 AAA ATPase central domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZU9_9BACL Length = 452 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 168/422 (39%), Positives = 248/422 (58%), Gaps = 5/422 (1%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA RMRP +L +YIGQ+H++ GK L RAIEA + S++L+GPPG GKTTLA +I+ + Sbjct: 32 LADRMRPTSLDEYIGQEHIVGPGKLLRRAIEADQVSSILLYGPPGCGKTTLAHIISHHTK 91 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 A+ R++AV + VK++RE IE+A+ ++ G +TILF+DEVHRFN S+QDA LP +E GT Sbjct: 92 AEFVRLNAVDASVKDVREVIEKAQNDKAFYGTKTILFLDEVHRFNSSRQDALLPAVEKGT 151 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 I FIGATTENP +N AL+SR+ ++ L+ L+ E + +A+ D+ +G G + + + Sbjct: 152 IIFIGATTENPFHYVNGALMSRSTLFQLEPLTKEHSLIAMRRALADQEKGLGFMPLQVDE 211 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 E IA + NGD RRALN LE+ A G + E+ E + D Sbjct: 212 EALLHIAAMANGDIRRALNALELAAMTTPPQPDGTVHITLEVAEESIRRPLVKADESTQ- 270 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 YD++SA HKS+RGS+ A ++ + G DP+ RR +A +SED+G A+P+AM A Sbjct: 271 -YDVLSAFHKSIRGSSDAAVFWFLYAVEKLGMDPMTFIRRLIAASSEDIGLANPQAMVQA 329 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 ++A + + G E I QAI++ +PKSNAV A A+A E +VP+HLR+ Sbjct: 330 VSALEAYRNNGWPEARLNIVQAILFAVESPKSNAVVEAIGNAMAAIEEVKSAEVPLHLRD 389 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 K ++G+ + Y+Y HD Y + Y P ++ +Y T +G E KI Sbjct: 390 THYKGAAKLGH-EGYKYPHDYPGHYV-QQEYLPKRLSGRTFYHATEQGNEAKIKHNQELR 447 Query: 435 AE 436 Sbjct: 448 RR 449 >UniRef50_C8W9U5 AAA ATPase central domain protein n=2 Tax=Atopobium RepID=C8W9U5_ATOPD Length = 443 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 184/435 (42%), Positives = 256/435 (58%), Gaps = 16/435 (3%) Query: 1 MSNLSLD---FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWG 57 M L + PLAARMRP L Y+GQ+ + G L +AIE L S++L+G Sbjct: 1 MDTLFSGIERAAKKANAPLAARMRPTTLDGYVGQEDAVGPGSWLRKAIEHDTLSSVLLYG 60 Query: 58 PPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVH 116 P GTGKTTLA +IA +A+ +SA+T VK++R IE A AGRRTILF+DE+H Sbjct: 61 PAGTGKTTLARIIAHTTHAEFVEVSAITGTVKDLRREIEAAESRLLTAGRRTILFIDEIH 120 Query: 117 RFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 RF +SQQDA L +ED + IGATTENP FE+NSAL+SR+RV L +LS I++++ + Sbjct: 121 RFTRSQQDALLHAVEDRIVVLIGATTENPYFEVNSALISRSRVVELHALSDNAIDELIQR 180 Query: 177 AMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM------AEVDDSGKR 230 A+E + G VL ++ R+ I L GD R AL +LE+ + M A+ S Sbjct: 181 ALESEDGLAGA--FVLEEDARKEIVTLAGGDGRAALTSLELASQMVDVPESADGKASEPL 238 Query: 231 VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLY 290 V+ + + E R +D GD YD+ISA KS+RGS PDAALYW AR+I AG DP + Sbjct: 239 VITKQNVLEANPRRGLPYDKAGDMHYDIISAFIKSMRGSDPDAALYWLARMIDAGEDPKF 298 Query: 291 VARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY 350 +ARR + +ASED+GNADP+A+ +A AA+ +G E +AQA++Y+A APKSNA Sbjct: 299 IARRIMILASEDIGNADPQALLIAHAAFRSAEVIGYPECRINLAQAVIYMALAPKSNAAE 358 Query: 351 TAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI 410 AAL + R P +VP +LR+ +E G Y Y H+ + + Y P + Sbjct: 359 AGIDAALHEVRTGPRREVPSYLRDRTRPGSEEYG---NYLYPHNYPGGWI-EQRYLPEGL 414 Query: 411 AQTRYYFPTNRGLEG 425 + ++ P+ RG E Sbjct: 415 ERGAFFSPSPRGWEA 429 >UniRef50_Q75JU2 ATPase WRNIP1 n=2 Tax=Eukaryota RepID=WRIP1_DICDI Length = 876 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 172/429 (40%), Positives = 256/429 (59%), Gaps = 16/429 (3%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 +F +F PL+ +MRP L+ +IGQ+ LL + + ++ L S IL+GPPG GKTT Sbjct: 187 TNFKKKSFAPLSEQMRPTELSDFIGQESLLVGDPIVKKLFQSPELPSFILYGPPGCGKTT 246 Query: 66 LAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDA 125 LA+++A +N ++ +SAV SGVK+I+E I++AR G++TILF+DE+HR+NK QQD Sbjct: 247 LAQIVASKSNYNINALSAVGSGVKDIKEVIDKARNTLQFGKKTILFIDEIHRYNKLQQDV 306 Query: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGY 185 LP IE G I IGATTENPSFELN ALLSR +V+ ++ L+ E++E ++ + +E Sbjct: 307 LLPAIESGIIILIGATTENPSFELNGALLSRCKVFKMEKLTKENLETLIKRTLEVTPLLM 366 Query: 186 GGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV-------------- 231 + I + ++ +++AE+ +GDAR A+N L+M + + + K Sbjct: 367 DRRLI-MDEDAIKSLAEIADGDARVAINVLDMAIKANKEEQTYKERMEEKHSTSGIVRDI 425 Query: 232 -LKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLY 290 L + + + S +D GD FY+LISALHKSVRGS +A YW R++ +G +PLY Sbjct: 426 VLTKKQMGSLLQRTSLIYDKGGDAFYELISALHKSVRGSDANATAYWVIRMLESGCEPLY 485 Query: 291 VARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY 350 + RR + +ASED+G AD A+ +AIAA+ VG E AI Q VYLA A KSN+ Sbjct: 486 IVRRMVRMASEDIGLADNSALPLAIAAYQAVHFVGMPECTNAILQCAVYLANAAKSNSCD 545 Query: 351 TAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI 410 + + VP+HLRNAPTK+MK+ GYG +Y+Y H + ++Y P I Sbjct: 546 HWYAHTREYLEKHEGPPVPIHLRNAPTKMMKDWGYGADYQYNHAFDDQSQVTQIYLPEPI 605 Query: 411 AQTRYYFPT 419 +++ Sbjct: 606 KNEKFFEYK 614 >UniRef50_A5WC21 Recombination protein MgsA n=9 Tax=Bacteria RepID=A5WC21_PSYWF Length = 439 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 182/427 (42%), Positives = 251/427 (58%), Gaps = 9/427 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 PLA R+RP+ L + IGQ HLLA G P+ R +E GHL S+IL G G GKTT+A ++A Sbjct: 13 IPLAQRLRPKRLDEVIGQTHLLAPGAPIQRFVEHGHLPSLILHGEAGIGKTTIAMLLADA 72 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAG---RRTILFVDEVHRFNKSQQDAFLPHI 130 +SA+ +GVK++RE ++ + G ++F+DE+HRFNK+QQDA L + Sbjct: 73 VGRPFYPLSAINTGVKQLREVLDAGSSSGQGGLDFASPVVFIDEIHRFNKAQQDALLGAV 132 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G IT IGATTENPSF +N+ALLSR +VY L+ L I ++L +A+ + Sbjct: 133 ESGDITLIGATTENPSFSVNNALLSRCQVYRLQPLDDTQIGELLQRALSQDEFLS---QL 189 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + + IA L GDAR+ALN LEM A V+ LL+ +A R+D Sbjct: 190 SIDLQALPQIANLAQGDARKALNLLEMAVQ-ASDHSKQPIVIDDALLSSVAQTTLQRYDK 248 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 GD+ YD+ISA+ KSVRGS PDAALYW AR++ AG P ++ARR + +ASED+GNA+P A Sbjct: 249 DGDQHYDIISAMIKSVRGSDPDAALYWMARMLVAGEPPEFIARRLVILASEDIGNANPNA 308 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A AA +G E + Q +VYLA + KSN+ Y A A+ A++ VP+ Sbjct: 309 LLLADAALRSVKAIGMPEARIILGQVVVYLATSAKSNSTYLAINKAMQLAQQ-DQSPVPM 367 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HLRN TKLM+ GYG+ Y Y HD N Y + Y P + TR+Y + E + Sbjct: 368 HLRNGVTKLMQSQGYGEGYIYPHDYPNHYQPQQ-YLPDNLVGTRFYEYADNQREQHSLQF 426 Query: 431 LAWLAEQ 437 + WL Q Sbjct: 427 MQWLQTQ 433 >UniRef50_B2KBM0 AAA ATPase central domain protein n=2 Tax=Elusimicrobia RepID=B2KBM0_ELUMP Length = 416 Score = 490 bits (1261), Expect = e-137, Method: Composition-based stats. Identities = 178/441 (40%), Positives = 249/441 (56%), Gaps = 28/441 (6%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 M ++ D PLAA M P+NL + GQ+H++ G+ L R IE+ + S + +GPPG Sbjct: 1 MEDIKHDM------PLAAAMAPKNLDDFAGQKHVIGPGRMLRRMIESDTIKSAVFFGPPG 54 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRN---AGRRTILFVDEVHR 117 GKT LA IA A ++A +GV +I++ IE A++ RN +RT++ +DE+H Sbjct: 55 VGKTALARFIASKTEAVTVELNAAAAGVGDIKKVIEEAKERRNDTFLEKRTLVVLDEIHH 114 Query: 118 FNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 FNK+QQD LP +E G I IG TTENP F +N+ALLSR V+ K L +D+EQ+L + Sbjct: 115 FNKTQQDVLLPSVERGDIILIGLTTENPYFYINNALLSRFSVFEFKPLDAKDLEQILKRV 174 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELL 237 ++ K + + + NGDARR LN +++ D G + ++ Sbjct: 175 LKIKEA-------KIQKDAKDFFITQANGDARRLLNAVDLAILTTAKDSDGIVNITMDVA 227 Query: 238 TEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLA 297 E +R +D KGD YD+ISA KS+RGS PDAA+YW AR++ +G DP ++ARR L Sbjct: 228 KECMQKRHLNYDKKGDEHYDVISAFIKSMRGSDPDAAVYWLARMLESGEDPRFIARRILI 287 Query: 298 IASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAL 357 ASEDVGNA+P A+ +A AA+ C +G E +AQA +Y+ACAPKSNA Y A AL Sbjct: 288 CASEDVGNAEPAAIMLAEAAFKCAEVLGMPEVRIPLAQAAIYVACAPKSNASYIAVDEAL 347 Query: 358 ADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 + RE VP HLR K + Y+YAHD N Y E Y P ++Y Sbjct: 348 KEVREGIQRRVPAHLR----SGFKN----EGYKYAHDYPNHYVKQE-YMP---KPKKFYE 395 Query: 418 PTNRGLEGKIGEKLAWLAEQD 438 PT G E I E+L L ++ Sbjct: 396 PTEIGKEKNIKERLKKLKGEE 416 >UniRef50_A5GNS9 ATPase related to the helicase subunit of the Holliday junction resolvase n=46 Tax=cellular organisms RepID=A5GNS9_SYNPW Length = 737 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 182/422 (43%), Positives = 259/422 (61%), Gaps = 4/422 (0%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP NL +++GQ +LA G+ L RAI A + ++IL GPPG GKTTLA +IA + Sbjct: 23 PLADRLRPRNLDEFVGQGAILAEGRLLRRAIAADRVGNLILHGPPGVGKTTLARIIANHT 82 Query: 75 NADVERISAVTSGVKEIR-EAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A ++AV +GVK++R E E ++ G RTILF+DEVHRFN +QQDA LP +E+G Sbjct: 83 RAHFSSLNAVLAGVKDLRAEVSEAGQRLERHGLRTILFIDEVHRFNSAQQDALLPWVENG 142 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+T IGATTENP FE+N AL+SR+R++ L++L+ D+ ++L A++D RGYG + I + Sbjct: 143 TLTLIGATTENPYFEVNKALVSRSRLFRLQALTPGDLSKLLNSALKDPERGYGDRKIKIE 202 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 E + ++ +GDAR LN LE+ D D++G + + E +R+ +D +GD Sbjct: 203 PEAAAHLVDVASGDARSLLNALELAVDSTPADENGLVRIDLGIAEESIQQRAVLYDKQGD 262 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 +D ISA KS+RGS PDAAL+W AR++ AG +P ++ RR L A EDVG ADP+A+ V Sbjct: 263 AHFDTISAFIKSIRGSDPDAALFWLARMVEAGENPRFIFRRMLISAGEDVGLADPQAVVV 322 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A F R+G EG +AQA +YLA KSN+ F AL R DVP HLR Sbjct: 323 VEACAAAFERIGLPEGLYPLAQAALYLAGTDKSNST-GGFFEALRQVRSAQRQDVPTHLR 381 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 +A G GQ YRY H + A + Y P + ++ P+++G EG+ E++ Sbjct: 382 DANRDG-DAFGDGQGYRYPHAFREHWVAQQ-YLPDALQGEAFWAPSHQGWEGQRRERILE 439 Query: 434 LA 435 Sbjct: 440 RR 441 >UniRef50_B5JJN9 ATPase, AAA family protein n=2 Tax=Verrucomicrobia RepID=B5JJN9_9BACT Length = 496 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 175/442 (39%), Positives = 247/442 (55%), Gaps = 10/442 (2%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 S N QPLAAR+RP +L++ +GQ+H+LA GK LPR +EA S++ +GPPG GKT Sbjct: 65 SAGERSNKRQPLAARLRPRSLSEVVGQEHILAPGKLLPRLVEANTFGSLLFYGPPGCGKT 124 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQD 124 ++AE IA + RI+AV S V E+RE + AR R + T+LF+DE+HRFNKSQQD Sbjct: 125 SMAEAIAGETKSRFVRINAVMSNVAELREILGIAR--RMEDKDTVLFIDEIHRFNKSQQD 182 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 LP +E G I IGATT NP F +N+ LLSR+ ++ L + + L +A+ D+ RG Sbjct: 183 LLLPDVEAGNIRLIGATTHNPGFYVNAPLLSRSHLFRLNPHDVDTVAATLAKALTDEERG 242 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 G + I +A+L +GD RR LN LE + M + E + A ER Sbjct: 243 LGERKITAVAGVLEGLAKLCDGDLRRGLNALE-VIAMG---LEEGGEITEESVGVFASER 298 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVG 304 R+D D YD ISA KS+RG +PD ALYW A+++ G DP ++ARR + ASEDVG Sbjct: 299 QIRYDADEDEHYDTISAFIKSMRGGSPDGALYWLAKMLKGGEDPRFIARRLVVFASEDVG 358 Query: 305 NADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP 364 AD A+ +A+A VG E +A + Y+A APKSN+ Y+A ALA P Sbjct: 359 LADSGALSLAVATQQACDFVGMPECRINLAHCVSYMAAAPKSNSAYSALAKALAAIEAGP 418 Query: 365 DYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLE 424 +VP+ LR+ K K +G ++YRY+HD A +G+ Y + R+ G E Sbjct: 419 VQEVPLWLRDKGGKASKALGNSKDYRYSHDFAENI-SGQEYM---VEPMRFLELNRVGEE 474 Query: 425 GKIGEKLAWLAEQDQNSPIKRY 446 +I ++L + + Sbjct: 475 TEIAKRLDRWEKLKKERMKDEG 496 >UniRef50_D2AWQ0 Recombination factor protein RarA n=3 Tax=Bacteria RepID=D2AWQ0_STRRD Length = 436 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 192/440 (43%), Positives = 266/440 (60%), Gaps = 10/440 (2%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTG 62 + + + + +PLA RMRP L + IGQ+HLL G PL R +EA S+ LWGPPGTG Sbjct: 6 DSAAEEAHRGHEPLAVRMRPRGLDEVIGQRHLLGPGTPLRRLVEAEAPMSLFLWGPPGTG 65 Query: 63 KTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKS 121 KTTLA V+A +SAV++GVKE+R AIE+AR+ +GR+T+LFVDEVHRFNK+ Sbjct: 66 KTTLAYVVAGVTKRRFVEVSAVSAGVKEVRAAIEQARRELGMSGRQTVLFVDEVHRFNKA 125 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 QQDA LP +E+ +TFIGATTENP F + S LLSR+ + L+SLS +DI VL +A+ D Sbjct: 126 QQDALLPAVENRWVTFIGATTENPFFSVISPLLSRSLLLTLESLSEDDIRMVLERAVADP 185 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 G L E + L GDARR+L LE + +A+ + + E++ Sbjct: 186 RGLDG--KAKLAPEAAEHLVRLAGGDARRSLTYLEAASLIADGE------ITVEVVERAV 237 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 + + R+D +GD+ YD+IS KS+RGS DAAL++ AR++ AG DP ++ARR + ASE Sbjct: 238 DKAAVRYDRQGDQHYDVISGFIKSMRGSDADAALHYLARMVEAGEDPRFIARRIVIFASE 297 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG ADP +QVA+AA +G EG +AQA+++ A APKSNAV A AA D R Sbjct: 298 DVGMADPTCLQVAVAAAQAVEFIGLPEGRLNLAQAVIHCALAPKSNAVINAIGAASEDVR 357 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 VP HLR+A K++G+G+ Y+Y HD + + Y P E+ RYY PT Sbjct: 358 RGSIGHVPAHLRDAHYGGAKKLGHGKGYKYPHDFEHGLVRQD-YAPEELRDRRYYQPTRH 416 Query: 422 GLEGKIGEKLAWLAEQDQNS 441 G E ++ + + + Sbjct: 417 GAEAAFADRWSRIRSFLRGQ 436 >UniRef50_Q17P00 Werner helicase interacting protein n=3 Tax=Endopterygota RepID=Q17P00_AEDAE Length = 560 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 175/437 (40%), Positives = 247/437 (56%), Gaps = 28/437 (6%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 + + + PLA +MRP+ L+ YIGQ+ ++ L E + SMILWGPPG GKT Sbjct: 127 KVGDEEGSNIPLAEKMRPDELSDYIGQEQIIGKNTVLRTLFEKNTIPSMILWGPPGCGKT 186 Query: 65 TLAEVIARYANAD----VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TLA +IA + ++SA SGV +++EA++ A+ + R+TI+F+DE+HRFNK Sbjct: 187 TLAHIIAAHCKKHGSMKFVKLSATMSGVNDVKEAVKLAKNDLAFKRKTIMFMDEIHRFNK 246 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 QQD FLPH+E GTIT IGATTENPSF LNSALLSR RV +L+ L E + ++L +A+ Sbjct: 247 LQQDIFLPHVESGTITLIGATTENPSFSLNSALLSRCRVIVLEKLGVEAVMKILKRALPQ 306 Query: 181 KTRGYGGQD--------------IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 + +++ ET R +AE+ +GDAR ALN+L++ + Sbjct: 307 YKTVMFENNNRVPDIRGLPFVPRMMISAETIRWLAEICDGDARIALNSLQLALNTVAARQ 366 Query: 227 SGKR----VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + + + E + +D KGD+ Y+LISALHKS+R S +AALYW +R++ Sbjct: 367 DEEESALKRISLDEIKEGIKKSHLMYDRKGDQHYELISALHKSIRASDDNAALYWCSRML 426 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLAC 342 +G DP Y+ RR + +ASED+G AD A+ VA + VG E + IA VYLA Sbjct: 427 VSGEDPRYLVRRMIRMASEDIGLADTNALTVATSTLAAVQAVGMPEADCIIAHCAVYLAR 486 Query: 343 APKSNAVYTAFKAALADA--RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYA 400 APKS VY AF A + P VP+HLRNA TKLMK + YG Y H + + Sbjct: 487 APKSREVYNAFNRCKASIGQNKGPMPSVPLHLRNATTKLMKSLKYGAGYNLQHKDESGL- 545 Query: 401 AGEVYFPPEIAQTRYYF 417 Y P + Y+ Sbjct: 546 ---QYMPEGLENENYFS 559 >UniRef50_D2RB58 Recombination factor protein RarA n=2 Tax=Gardnerella vaginalis RepID=D2RB58_GARVA Length = 462 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 184/455 (40%), Positives = 265/455 (58%), Gaps = 15/455 (3%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH------LHSMILWGP 58 + N +PLA RMRP ++ +GQ H L G PL R S++L+GP Sbjct: 8 ASSAPSNVTRPLAVRMRPSSIEDVLGQSHALKEGSPLRRLANPQSKGSLTAPSSVVLFGP 67 Query: 59 PGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHR 117 PG GKTTLA ++AR + E +SAVTSGVK++R ++RA + + G+ T+LF+DEVHR Sbjct: 68 PGVGKTTLAYIVARQSGRVFEELSAVTSGVKDVRAVLDRAHERLVSNGQETVLFIDEVHR 127 Query: 118 FNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQA 177 F+KSQQDA LP +E+ +TFIGATTENPSF + LLSR+ V L SLS ED+ ++ +A Sbjct: 128 FSKSQQDALLPSVENRDVTFIGATTENPSFSIIKPLLSRSVVVKLASLSVEDLHTLIERA 187 Query: 178 MEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD-----DSGKRVL 232 + + + + D+ +I L GDAR+ L LE A D K V+ Sbjct: 188 LTSENGLNNQ--LKIDDDAIDSIIRLSGGDARKTLTILEAAAGAVTGDVALQHGKKKPVI 245 Query: 233 KPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVA 292 ++++ + + R+D GD YD+ISA KS+RGS DA+L++ AR++ AG DP ++A Sbjct: 246 TDDIVSNVMDTTTVRYDKDGDDHYDVISAFIKSMRGSDVDASLHYLARMLRAGEDPRFIA 305 Query: 293 RRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTA 352 RR + A+E+VG A P+ +QV +AA +G E +++A++ +A APKSNA Y A Sbjct: 306 RRIMIAAAEEVGMAAPQILQVTVAAAQAVALIGMPEARIILSEAVIAVATAPKSNASYNA 365 Query: 353 FKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 AL D VP+HLRNAPT LMK G Y+YAHD A A+ + Y P E+ Sbjct: 366 INKALQDVDAGNIGQVPLHLRNAPTALMKSWGNHDGYKYAHDYPGAVASQQ-YMPDELVG 424 Query: 413 TRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR 447 YY P+NRG E ++ ++L+ + NS K + Sbjct: 425 REYYQPSNRGYEHELTQRLSQIRAILHNSENKNNK 459 >UniRef50_B1ZVQ2 AAA ATPase central domain protein n=10 Tax=Bacteria RepID=B1ZVQ2_OPITP Length = 448 Score = 483 bits (1243), Expect = e-135, Method: Composition-based stats. Identities = 181/425 (42%), Positives = 247/425 (58%), Gaps = 10/425 (2%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLAARMRP LA+ +GQ H+L G LPR + S+I +GPPG GKT++AE IA+ Sbjct: 27 QPLAARMRPRRLAEVVGQSHILKPGSLLPRLVAQNRFGSLIFYGPPGCGKTSIAEAIAQE 86 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N+ R++AV S V E+RE + AR+ A TILF+DE+HRFNKSQQD LP +E+G Sbjct: 87 TNSRFVRVNAVMSNVAELREILHSARRLPQAS--TILFIDELHRFNKSQQDLLLPDVEEG 144 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 T+ IGATT NP F +N LLSR+ ++ L+ LS + VL +A+ D+ RG G + + Sbjct: 145 TVRLIGATTHNPGFYVNPPLLSRSHLFRLEPLSPAAVTGVLKKALADEERGLGARKVTAD 204 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ +A L +GD RRALN LE++ V+ P L A ER R+D D Sbjct: 205 DKVLADLAVLCDGDLRRALNALEVLVL----GLPEGGVITPAELEVFARERRIRYDADED 260 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KS RGS PDAALYW A+++ G DP ++ARR + +ASEDVG ADP+A+ + Sbjct: 261 EHYDTISAFIKSCRGSDPDAALYWLAKMLAGGEDPRFIARRLVILASEDVGLADPQALPL 320 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 +AA +G E E +A A +Y+A A KSN+ A A +E+P +P LR Sbjct: 321 TVAAHHAVDFIGLPEAELTLAHATLYIATAAKSNSATLALGEAHRALKEQPVQTIPAALR 380 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + + K +G GQ Y Y+HD +G+ Y + Y P G E KI ++LA Sbjct: 381 SKSGQANKRIGQGQGYLYSHDHQENI-SGQDYLEKPL---TLYTPKPVGWEAKIVDRLAR 436 Query: 434 LAEQD 438 E Sbjct: 437 WKELK 441 >UniRef50_B2W7D9 DNA-dependent ATPase MGS1 n=2 Tax=Leotiomyceta RepID=B2W7D9_PYRTR Length = 534 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 165/411 (40%), Positives = 237/411 (57%), Gaps = 15/411 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L GQ+ L+ L ++ G L SM+LWG PGTGKTT+A +IA + Sbjct: 118 PLAERMRPMSLEHVYGQE-LVGPKGILRAMVDEGRLPSMVLWGRPGTGKTTIARLIANTS 176 Query: 75 NADVERISAVTSGVKEIREAIERA-RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + I++ ++ ++++R A + R GR+TI+F DE+HRF+K+QQDAFL +E G Sbjct: 177 GSRFVEINSTSTRLEQVRAIFTEASQDLRLTGRKTIVFCDELHRFSKTQQDAFLGPVESG 236 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 TIT I ATTENPSF++ SALLSR R + L L +D+ ++L +AM ++ +L Sbjct: 237 TITLIAATTENPSFKIISALLSRCRTFTLDDLKEDDLVKILERAMTAESCT----SPILD 292 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 A +GDAR ALN LE+ +A D K + + + ++ +D GD Sbjct: 293 KPMLAYFARFSDGDARTALNLLELAMSLANQPDMTKEKI------QQSLTKTLVYDRAGD 346 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD ISALHKS+RGS P A+LY+ AR++ +G DP Y+ARR + +ASEDVG AD + + Sbjct: 347 QHYDSISALHKSIRGSDPHASLYYLARMLESGEDPRYIARRLIVVASEDVGLADNSMLSL 406 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP--DYDVPVH 371 A A + +G E +A A+ L APKS VY K A+ +E +P H Sbjct: 407 ATATYAACENIGMPECRINLAHAVTALTLAPKSTRVYRGLKNAIDAVKEPGMAALPIPHH 466 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 +RNAPTKLMK+MGYG Y+Y + + E Y P + + T+ G Sbjct: 467 IRNAPTKLMKDMGYGDGYKYNPNYLDGKVKQE-YLPEALRGRSFLEETDLG 516 >UniRef50_Q0EY57 ATPase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY57_9PROT Length = 448 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 191/441 (43%), Positives = 266/441 (60%), Gaps = 15/441 (3%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 + N++ D S PLA R+RP L GQ L AA + G S I WGPPG Sbjct: 11 LDNIASDVS----IPLAYRIRPAVLQDVAGQPDLTAADSWFSTMVSEGRCCSCIFWGPPG 66 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 GKTTLA V+A A ++SAV++G E+++ ++RAR G+ +LF+DE+HRFNK Sbjct: 67 VGKTTLATVMADAAGIPFVQLSAVSAGKAEVQDVVKRARSA---GQTWLLFLDEIHRFNK 123 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +QQD LP IEDGT+ +GATTENPSF LN+ALLSR RV +L++L D+ +L +A Sbjct: 124 AQQDVLLPCIEDGTLVLVGATTENPSFSLNNALLSRCRVIVLQALQASDVAVILKRAC-- 181 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 + G + L D+ +AE +GDAR ALN LE + +R + + + Sbjct: 182 RYLGDQAKAFSLDDDALVWLAENSDGDARYALNALESL-----FQADAERCWSLQAVQQQ 236 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 + R+AR+D GD YDLISALHK +R S PDAA+YW AR++ AG PLY+ARR + +A+ Sbjct: 237 SLRRAARYDRDGDAHYDLISALHKCIRDSDPDAAVYWLARMLEAGEQPLYIARRLIRMAT 296 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 ED+G ADP+A+ +A+ A F +G EGE+ + +A +YLA + KSNA Y A K A A Sbjct: 297 EDIGLADPKALNIALDAHRMFEILGSPEGEQGLFEAAIYLALSAKSNAAYMAEKEARKLA 356 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 +VP+HLRNAPT+LM+++G+G YRYAHDE N + +FP E+ + Y P Sbjct: 357 GLTRAAEVPMHLRNAPTRLMQQLGHGAGYRYAHDEENGVV-DQRHFPTELGRPTLYRPVA 415 Query: 421 RGLEGKIGEKLAWLAEQDQNS 441 RG E + E++ WL Sbjct: 416 RGFERTLRERIDWLKAARHGK 436 >UniRef50_Q1QXX6 Recombination protein MgsA n=9 Tax=Bacteria RepID=Q1QXX6_CHRSD Length = 469 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 232/440 (52%), Positives = 304/440 (69%), Gaps = 5/440 (1%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 M + DNT PLA RMRP L Y+GQ+ L+ GKPL R E+G + SMILWGPPG Sbjct: 26 MDLFASSQPDNT--PLAYRMRPRRLDDYVGQEALVGPGKPLRRMAESGAVRSMILWGPPG 83 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 GKTTLA+++A + A +ER+SAV +GVK+IR A+ERAR+ + G+ T+LF+DE+HR NK Sbjct: 84 VGKTTLADILADASGAMLERLSAVMAGVKDIRAAVERAREGQVRGQPTLLFLDEIHRLNK 143 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQDA LPH+E G +T IGATTENPSFE+NSALLSRARVY+L+ L TED+ +VL QA+ D Sbjct: 144 SQQDALLPHVESGLLTLIGATTENPSFEVNSALLSRARVYVLRKLETEDLLRVLHQALAD 203 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 RG G + I + +A +GDARRAL LE D AE + G+R L + L E+ Sbjct: 204 TERGLGKRHIEADEGVLETLARSASGDARRALGLLETACDFAEPTEGGER-LTLQALHEV 262 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 G +++ FD +GD +YDL+SA+HKS+R S PDAAL + A+ GGDPL V RR AIAS Sbjct: 263 LGHQASAFDKQGDHYYDLLSAIHKSIRSSRPDAALLYIAQFTQGGGDPLDVVRRLAAIAS 322 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNA+PRA+ + +AAWD + R+G EG+RAIA A ++LA APKSNA+ A+ AA Sbjct: 323 EDVGNAEPRALPLVMAAWDAYLRLGDYEGQRAIAHAALHLAIAPKSNAIDQAWNAAKQFV 382 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY--FPPEIAQTRYYFP 418 PD++VP +LRNAPTKLM +G+G+ YRYAH+E N Y AG + +P E+ ++ P Sbjct: 383 AAHPDFEVPTYLRNAPTKLMASLGHGEGYRYAHNEPNGYPAGRAHDCWPAELPAATFFAP 442 Query: 419 TNRGLEGKIGEKLAWLAEQD 438 T G E + + AW AE D Sbjct: 443 TEYGQEKRFKQMQAWRAELD 462 >UniRef50_Q1D8G6 ATPase, AAA family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D8G6_MYXXD Length = 444 Score = 480 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 181/442 (40%), Positives = 260/442 (58%), Gaps = 6/442 (1%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 S N F PLA RMRP ++IGQ HLL G+PL + IE + S + WGPPG GK Sbjct: 8 FSASVDVNRFAPLAERMRPRTPDEFIGQSHLLGPGRPLRQLIERKAIVSSLFWGPPGVGK 67 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQ 122 TTLA ++A +A+ +SAV+ G+ IRE + A + RN RRT+LFVDE+HR+ K+ Sbjct: 68 TTLARMMATGVDAEFVILSAVSDGIPRIREVVAEAERLRNQYSRRTVLFVDEIHRWAKNV 127 Query: 123 QDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT 182 Q+ LPH+E G +GATTEN SFE+ AL+SR RV+ LK L+ DI+ LT+A+ D Sbjct: 128 QEQALPHVESGLFVLLGATTENVSFEVRPALVSRCRVFQLKELTVADIQSALTRALGDSK 187 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 RG G +++ + + +A+ GD R+AL LE+ A + + PE E G Sbjct: 188 RGLGARNLSVGEGALTLLAKGGVGDVRKALGALELAASLTADGAE----ITPETAREAVG 243 Query: 243 ERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 +R D GD+ YDL+SAL KS RGS A++W A+++ G D + RR IA ED Sbjct: 244 TSLSRHDKDGDQHYDLLSALQKSCRGSNVQGAVFWAAKLLQTG-DVASLWRRLKVIAVED 302 Query: 303 VGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE 362 VG A P A+ V + F +G EG +A A+V LA A KSN Y A AALA +E Sbjct: 303 VGMAMPEAISVVRDCEEAFHAMGMPEGRICVAHAVVLLATAKKSNRAYAALDAALAALQE 362 Query: 363 RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 P+ + P+H+RNAPT+LMKE+G+G+ Y+ + + Y G+ Y P + ++ +Y P+ G Sbjct: 363 HPNAEPPLHIRNAPTELMKELGHGKGYQTPWNFKDHYVPGQTYLPAPLERSVFYRPSKEG 422 Query: 423 LEGKIGEKLAWLAEQDQNSPIK 444 E +I E+++ +D+ S + Sbjct: 423 YEAEIHERMSHWWREDKASRGE 444 >UniRef50_Q50739 Uncharacterized AAA domain-containing protein Rv2559c/MT2636 n=53 Tax=Bacteria RepID=Y2559_MYCTU Length = 452 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 175/427 (40%), Positives = 257/427 (60%), Gaps = 6/427 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L + +GQ HLLA G PL R +E + S+IL+GPPG+GKTTLA +I++ Sbjct: 30 PLAVRMRPASLDEVVGQDHLLAPGSPLRRLVEGSGVASVILYGPPGSGKTTLAALISQAT 89 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 E +SA+++GVKE+R IE +R+ G +T+LF+DEVHRF+K+QQDA L +E Sbjct: 90 GRRFEALSALSAGVKEVRAVIENSRKALLHGEQTVLFIDEVHRFSKTQQDALLSAVEHRV 149 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 + + ATTENPSF + + LLSR+ + L+ L+ ED V+ +A++D G+ + + Sbjct: 150 VLLVAATTENPSFSVVAPLLSRSLILQLRPLTAEDTRAVVQRAIDDPRGL--GRAVAVAP 207 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 E + +L GDARRAL + AE + ++ + + + + R+D GD+ Sbjct: 208 EAVDLLVQLAAGDARRALTA---LEVAAEAAQAAGELVSVQTIERSVDKAAVRYDRDGDQ 264 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 YD++SA KSVRGS DAAL++ AR++ AG DP ++ARR + +ASED+G A P A+QVA Sbjct: 265 HYDVVSAFIKSVRGSDVDAALHYLARMLVAGEDPRFIARRLMILASEDIGMAGPSALQVA 324 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 +AA +G E + +A A ++LA APKSNAV TA AA+ D + VP HLR+ Sbjct: 325 VAAAQTVALIGMPEAQLTLAHATIHLATAPKSNAVTTALAAAMNDIKAGKAGLVPAHLRD 384 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 +G Q Y+Y+HD+ + A + Y P E+ YY PT RG E +I +L L Sbjct: 385 GHYSGAAALGNAQGYKYSHDDPDGVVAQQ-YPPDELVDVDYYRPTGRGGEREIAGRLDRL 443 Query: 435 AEQDQNS 441 + Sbjct: 444 RAIIRKK 450 >UniRef50_Q6BHR7 DEHA2G16302p n=8 Tax=Saccharomycetales RepID=Q6BHR7_DEBHA Length = 786 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 171/465 (36%), Positives = 245/465 (52%), Gaps = 41/465 (8%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP++L +Y GQ+ L+ L I++ + S ILWG PG GKT+LA +I++ + Sbjct: 193 PLAQRLRPKSLDEYYGQEKLVGENGILKNIIKSDQIPSFILWGVPGVGKTSLARIISQTS 252 Query: 75 NADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N +S K +RE A R GR+TILF+DE+HRFNK+ QD LP IE G Sbjct: 253 NCKFLEVSGAEGNAKRLREVFTMADNERRLTGRKTILFLDEIHRFNKAVQDLLLPVIEKG 312 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKTRGYGGQD 189 +T IGATTENPSF LN+ALLSR ++++ L EDI +++ + + + + +G Sbjct: 313 IVTVIGATTENPSFTLNNALLSRMHTFIMEPLLKEDIVKIINRGLLVVNKSRKLVFGLHL 372 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEV-------------------DDSGKR 230 I L + IA L GD+R ALN LE + G Sbjct: 373 IALDKDAIDYIASLSAGDSRVALNILESINAYLSSVQYSRFSGYEEGEKAIQIPKTLGVI 432 Query: 231 VLKPELLTEIAGERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDP 288 + + L + R+ + +D +G+ YD ISA HKSVRGS DAA+++ +++ G DP Sbjct: 433 KVCLQNLKPLLETRNYQKMYDKQGESHYDTISAFHKSVRGSDADAAVFYLVKMLVGGEDP 492 Query: 289 LYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNA 348 L++ARR + IASEDVG D + AIA + VG EGE +A LA APKS Sbjct: 493 LFIARRMIVIASEDVGLRDSSCLPFAIATKEALEFVGMPEGEIILAHCATKLARAPKSTK 552 Query: 349 VYTAFKAALADARERPDY---DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY 405 Y A ++A + +E PD +P+HLRNAPTKLMKE GYG Y+Y + + Y Sbjct: 553 SYRALRSAQSLFKENPDTTSIPIPLHLRNAPTKLMKEFGYGDNYKYNPSFTHGKVKQD-Y 611 Query: 406 FPPEIAQTRYYFPTNRG-----------LEGKIGEKLAWLAEQDQ 439 P E+ ++ T+ G E E+ +L + + Sbjct: 612 MPKELRNVKFMEETHLGTTNDPSVDSYDYEMLSQERNDYLNFKRK 656 >UniRef50_C8XD35 AAA ATPase central domain protein n=21 Tax=Actinobacteridae RepID=C8XD35_NAKMY Length = 494 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 182/439 (41%), Positives = 253/439 (57%), Gaps = 12/439 (2%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA 71 PLAARMRP L + +GQQHLL G PL R ++ G SM+L+GPPGTGKTTLA ++A Sbjct: 39 PHAPLAARMRPRTLDEVVGQQHLLGPGAPLRRLVQGGAPSSMLLYGPPGTGKTTLATLVA 98 Query: 72 RYANADVERISAVTSGVKEIREAIERAR-QNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 ++SAV++GVKE+R I A + R G +T+LF+DEVHRF+++QQD+ L + Sbjct: 99 GSTGRFFAQLSAVSAGVKEVRAVIAEATTRLRRTGEQTVLFIDEVHRFSRTQQDSLLGAV 158 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 ED TI + ATTENP F + S LLSR+ + L+ L+ DI +++ +A+ D+ G Sbjct: 159 EDRTIVLVAATTENPFFSVVSPLLSRSLILQLQPLTDTDISELIDRAVADERGLAGA--F 216 Query: 191 VLPDETRRAIAELVNGDARRALNTLE--------MMADMAEVDDSGKRVLKPELLTEIAG 242 L + R + L GDARRAL LE + A ++ D +G + + + Sbjct: 217 TLAEPARAHLVALAGGDARRALTALEASAESVRELDAPDSDDDPAGVLEIDLDAVERAVN 276 Query: 243 ERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASED 302 + R+D GD+ YD+ SA KS+RGS DAAL++ AR+I AG DP ++ARR + ASED Sbjct: 277 RAAVRYDRSGDQHYDVTSAFIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMVHASED 336 Query: 303 VGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE 362 VG ADP A+ A+AA VG E A+AQ ++L+ APKSNAV TA AA+AD RE Sbjct: 337 VGMADPTALPAAVAAAQVVQLVGLPEARIALAQVTIHLSTAPKSNAVITAIDAAMADVRE 396 Query: 363 RPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 VP LR+ + +G+ Q Y Y H A A + Y P E+ YY PT G Sbjct: 397 GRAGSVPPALRDGHYPGAQRLGHAQRYVYPHGRPGAVVAQQ-YPPDELVGRDYYRPTGFG 455 Query: 423 LEGKIGEKLAWLAEQDQNS 441 E + E++ L + Sbjct: 456 AERVLAERVPKLRRTIRGQ 474 >UniRef50_C4Y1S6 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y1S6_CLAL4 Length = 768 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 174/466 (37%), Positives = 254/466 (54%), Gaps = 34/466 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L + GQ+ L+ L + + + S ILWG PG GKT+LA +IA + Sbjct: 223 PLAQRLRPKTLDDFFGQEKLVGPNGILRNIMASQQIPSFILWGVPGVGKTSLARIIASNS 282 Query: 75 NADVERISAVTSGVKEIREAIERARQNRN-AGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 N +S S K+++EA A+ + +G +TILF+DE+HRFNK+ QD LP IE G Sbjct: 283 NHRYVELSGSESSAKKLKEAFSNAQNEQQLSGTKTILFLDEIHRFNKAVQDLLLPVIEKG 342 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKTRGYGGQD 189 +T IGATTENPSF LN+ALLSR ++++ LS E + ++L + + + + +G Sbjct: 343 VVTVIGATTENPSFTLNNALLSRMHTFVMEPLSHEALVKILNKGLLLVNKTRKIVHGLHL 402 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEV------------------DDSGKRV 231 I + E IA L GD+R ALN LE + + G Sbjct: 403 IAMNKEAIDHIARLSTGDSRVALNILESVNAYLSGRKYNAFPDREEGETIDVPEKIGIIK 462 Query: 232 LKPELLTEIAGERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPL 289 + E L + R+ +D G+ YD ISA HKSVRGS DAA+++ ++++ G DPL Sbjct: 463 VDLENLKPLLATRNFHQMYDKVGENHYDTISAFHKSVRGSDADAAVFYLVKMLSGGEDPL 522 Query: 290 YVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV 349 ++ARR + IASED+G D + AI+A + VG EGE +A V LA APKS Sbjct: 523 FIARRMIVIASEDIGLRDSSCLPFAISAMEAVQFVGMPEGEIILAHCAVKLARAPKSTKS 582 Query: 350 YTAFKAALADARERPD---YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYF 406 Y A + A +E+P+ +P+H+RNAPTKLMKE+GYG+ Y+Y + A + + Sbjct: 583 YRALRTAQELLKEKPEVTKLPIPLHIRNAPTKLMKELGYGESYKYNPFFKHGIAK-QTFM 641 Query: 407 PPEIAQTRYYFPTNRGL---EGKIGEKLAW--LAEQDQNSPIKRYR 447 PPEI ++ T+ G E + EK EQ+ ++YR Sbjct: 642 PPEIQDVKFVEDTHLGTIVDEDEEKEKYDKADAEEQEYRKFKEQYR 687 >UniRef50_A1SJC4 Recombination protein MgsA n=2 Tax=Actinobacteria (class) RepID=A1SJC4_NOCSJ Length = 456 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 188/438 (42%), Positives = 257/438 (58%), Gaps = 6/438 (1%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 SL + + PLA RMRP L + +GQ L AAG PL R +E S++LWGPPGTGKT Sbjct: 19 SLSANTHASAPLAVRMRPRTLDELVGQAQLRAAGSPLRRLVEGDQSMSLLLWGPPGTGKT 78 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQ 123 T+A ++++ + +SAV++GVKE+R AI+ AR G R T+LFVDEVHRF+K+QQ Sbjct: 79 TIAAIVSQQTDRRFVEVSAVSAGVKEVRAAIDAARAELAGGGRETVLFVDEVHRFSKAQQ 138 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 DA LP +E+ +T I ATTENP F + S LLSR+ + L+SL +D+ VL +A+ D+ Sbjct: 139 DALLPGVENRWVTLIAATTENPFFSVISPLLSRSLLLRLESLDDDDVRAVLDRAITDERG 198 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 G + + D+ + L GDARR+L LE A G + Sbjct: 199 LAGS--VGVDDDALGHLVRLAGGDARRSLTYLE--AAAGAALAQGLETVDLATAETAVDR 254 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 + R+D +GD+ YD++SA KSVRGS DAAL++ AR+I AG DP ++ARR + +ASEDV Sbjct: 255 AAVRYDRQGDQHYDVVSAFIKSVRGSDADAALHYLARMIEAGEDPRFIARRLMILASEDV 314 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G ADP A+ A+AA +G E + +A A + LA APKSNAV TA AALAD R Sbjct: 315 GLADPTALPTAVAAAQTVQLIGMPEAQLTLAHATIALAVAPKSNAVTTAIGAALADVRAG 374 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 VP HLR+A K++G+G Y+Y+HDE A + Y P +A YY PT G Sbjct: 375 KIGQVPPHLRDAHYSGAKKLGHGARYKYSHDEPFGIAEQQ-YAPDVVADAEYYRPTTLGA 433 Query: 424 EGKIGEKLAWLAEQDQNS 441 E I E+ + + Sbjct: 434 EAAIKERWERVRRLIRGQ 451 >UniRef50_C5MFE6 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MFE6_CANTT Length = 698 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 170/438 (38%), Positives = 250/438 (57%), Gaps = 25/438 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 PLA R+RP+ L + GQ+ LL L I++ + S +LWG PG GKT+LA +IA+ Sbjct: 160 IPLAHRLRPKTLDDFFGQEKLLGKDGALRNMIQSDIIPSFLLWGVPGIGKTSLARIIAKN 219 Query: 74 ANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +S + S K ++E +A ++ G+RTILF+DE+HRFNK+ QD LP IE Sbjct: 220 SRCKFVELSGIDSNAKNLKEVFLQAENHKKLTGQRTILFLDEIHRFNKAVQDLLLPVIEK 279 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED----KTRGYGGQ 188 G +T IGATTENPSF LN+ALLSR ++++ L+TE + ++LT+A+ + + + YG Sbjct: 280 GIVTVIGATTENPSFNLNNALLSRVHTFVMEPLNTESLIKILTRALFEVNRIRKKLYGFH 339 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD-----------SGKRVLKPELL 237 I L + IA L GD+R ALN LE + D G + +LL Sbjct: 340 YISLQKDAYHYIANLSMGDSRVALNILETLNAYLSADKFKIDNNDTSPKQGVIKVSADLL 399 Query: 238 TEIAGERSAR--FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC 295 + R+ +D GD YD+ISA HKS+RGS P+AA+++ ++++ G DP+++ RR Sbjct: 400 KPLLKTRNFHQMYDRNGDSHYDIISAFHKSIRGSDPNAAMFYLVKMLSGGEDPMFIMRRM 459 Query: 296 LAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKA 355 + I+SED+G D + IAA + VG EGE +A LA APKS Y A ++ Sbjct: 460 IVISSEDIGLRDSSCLPFMIAAKEALEFVGMPEGEIILAHCTNKLALAPKSTKSYRALRS 519 Query: 356 ALADARERPD---YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 A +E P+ VP+HLRNAPTKLMKE+GYG EY+Y + N + YFP + Sbjct: 520 AQNILKENPELTKLPVPIHLRNAPTKLMKELGYGDEYKYNPNYENGKIK-QNYFPQGMEP 578 Query: 413 TRYYFPTNRGLEGKIGEK 430 ++ + G K+ +K Sbjct: 579 IKFLDDIHLG---KLKDK 593 >UniRef50_Q6A8J0 Uncharacterized ATPase related to the helicase subunit of the holliday junction resolvase n=8 Tax=Actinobacteridae RepID=Q6A8J0_PROAC Length = 461 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 189/439 (43%), Positives = 260/439 (59%), Gaps = 5/439 (1%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 + N PLA R+RP + + +GQQHLL G PL R E S+ LWGPPG GKTT+A Sbjct: 24 TPNPDAPLAVRLRPRTIDEIVGQQHLLTPGSPLRRLAEGTGAMSVFLWGPPGVGKTTIAS 83 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLP 128 V++ N ISAVT+GVK+IR ++ AR+ G+ T+LFVDEVHRF+K+QQD LP Sbjct: 84 VVSHATNRRFVEISAVTAGVKDIRRELDTARRQLALGQPTVLFVDEVHRFSKAQQDVLLP 143 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT--RGYG 186 +E+ T+T I ATTENPSF + S LLSR+ + LK L+ D+ +L +A+ D R Sbjct: 144 AVENRTVTLIAATTENPSFSVISPLLSRSLLLTLKPLTEADVSSLLDRALSDPRGLRTES 203 Query: 187 GQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSA 246 + VL D+ R + +L GDARRAL LE A +G + ++++ + Sbjct: 204 DRRYVLEDDARADLLQLAAGDARRALTYLE--EAAAGASAAGTDTITSQIVSTAVDRAAV 261 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 R+D GD+ YD+ISA KSVRGS DAAL++ AR+I AG DP ++ARR + +ASED+G A Sbjct: 262 RYDRDGDQHYDVISAFIKSVRGSDVDAALHYLARMIEAGEDPRFIARRLIILASEDIGMA 321 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDY 366 P +Q +AA +G E +AQA + A APKSNAV TA ALAD R Sbjct: 322 APSVLQTCVAAAQAVQLIGMPEARLNLAQATIAAATAPKSNAVITAIDGALADVRAGKGG 381 Query: 367 DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGK 426 +VP HLR+A ++G+G YRYAH+ + A + Y P +IA TRYY PT+ G E Sbjct: 382 EVPAHLRDAHYSSAHDLGHGVGYRYAHNFPHGVAKQQ-YLPDDIASTRYYDPTDHGNEAA 440 Query: 427 IGEKLAWLAEQDQNSPIKR 445 I ++L+ + + Sbjct: 441 IAQRLSQIRALLGRDIEEE 459 >UniRef50_A6DHI5 ATPase, AAA family protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHI5_9BACT Length = 430 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 174/441 (39%), Positives = 248/441 (56%), Gaps = 15/441 (3%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 F +PLAA +RPE + GQ HL A G L R+IE S+I GPPGTGKT+ Sbjct: 2 SLFDHPRVEPLAATLRPEGFGDFFGQGHLTAEGSLLRRSIENDCFSSIIFTGPPGTGKTS 61 Query: 66 LAEVIARYANADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQD 124 LA +I+++ AD +SA+ S V E+R+A++ A + R GR+T+LFVDE+HRFNK+QQD Sbjct: 62 LASIISKHTEADFIALSAIDSSVSEVRKAVKAADEARKFSGRKTVLFVDEIHRFNKAQQD 121 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 + L IE+GT+ FIGATT NP F L AL SR+ ++ LK L ++ +L M + Sbjct: 122 SLLKDIENGTVRFIGATTHNPGFYLTPALCSRSLIFTLKPLEASAVKSLLEAKMTKIMKA 181 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 + + +E + ++E GDARRAL +E+ A+ D + E L E + Sbjct: 182 LEAE-LQFDEEGLKFLSENCEGDARRALTVIELAVKTAQSD-----KIGLEELRECLQVK 235 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVG 304 S ++D D Y+ SA KS+RGS PDAA+YW A ++ AG D ++ARR + ASEDVG Sbjct: 236 SYKYD--ADAHYNAASAFIKSMRGSDPDAAVYWLAYMLEAGEDIRFIARRIMIFASEDVG 293 Query: 305 NADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP 364 NADPRA+Q+A++A VG E ++QA+ Y A APKSNA Y A AL D + + Sbjct: 294 NADPRALQLAVSASQAVDIVGMPEARIILSQAVTYCATAPKSNAAYKAVNLALEDVKNQR 353 Query: 365 DYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLE 424 +P+HLR+ + +Y Y H+ AY E Y +++YY P RG E Sbjct: 354 SQVIPMHLRDPRSSGYN--PEEGDYVYPHNSKEAYVKQE-YI---GVESKYYQPVERGYE 407 Query: 425 GKIGEKLAWLAEQDQNSPIKR 445 KI E++ + + Sbjct: 408 TKIKERMDYWQSLRGEDDREE 428 >UniRef50_C4R299 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome n=1 Tax=Pichia pastoris GS115 RepID=C4R299_PICPG Length = 525 Score = 469 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 168/419 (40%), Positives = 235/419 (56%), Gaps = 28/419 (6%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L +Y+GQ HL+ L + GKT+LA +IA Sbjct: 111 PLAERLRPKTLEEYVGQSHLVGPTGVLRGS----------------NGKTSLARIIAAST 154 Query: 75 NADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + +SA +SG+ E R+ E AR R RRT+LF DE+HRFNKSQQDAFLP++E G Sbjct: 155 HNRCVELSATSSGISECRKVFEEARNEMRLTKRRTVLFCDEIHRFNKSQQDAFLPYVERG 214 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM----EDKTRGYGGQD 189 I IGATTENPSF+LNSALLSR RV++L L ED+ +V+ +++ + Y Sbjct: 215 DIILIGATTENPSFQLNSALLSRCRVFVLNKLDNEDLAKVVNRSLLLVNRVRKLVYNMPV 274 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDS---GKRVLKPELLTEIAGERSA 246 + L E+ + I + GD+R ALN +EM+ + +D + P L E+ A Sbjct: 275 LRLTTESLQYIIGVAGGDSRTALNLVEMVDSHYQKNDDTTAASVEVDPSTLREVLRSTHA 334 Query: 247 RFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNA 306 +D GD+ YD ISA HKSVRGS DA LY+ AR++ G DPLY++RR + +ASED+G Sbjct: 335 VYDRVGDQHYDAISAFHKSVRGSNVDATLYYLARMLHGGEDPLYISRRMIRMASEDIGVV 394 Query: 307 DPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPD- 365 D + A+A +D +VG E + +A LA A KS ++Y A+ A + + Sbjct: 395 DDSCLPFAVATFDAVHKVGLPEADVMLAHCAYKLATAAKSVSIYRAWNKVKAKVAQDANF 454 Query: 366 --YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 +P+HLRNAPTKLM+E+GY + Y+Y D E Y P EI +Y + G Sbjct: 455 AGAPIPMHLRNAPTKLMEELGYSKGYKYNPDFKEGKVVQE-YLPSEIKDETFYEDRHLG 512 >UniRef50_A9U314 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U314_PHYPA Length = 498 Score = 467 bits (1202), Expect = e-130, Method: Composition-based stats. Identities = 172/432 (39%), Positives = 245/432 (56%), Gaps = 30/432 (6%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 +L S + +PLA RMRP ++ +GQ HLL L I+A L S+I WGPPGTGKT Sbjct: 69 ALVGSGKSLEPLAERMRPASVDLVVGQDHLLGPRCMLRNLIDANSLSSIIFWGPPGTGKT 128 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQD 124 +L + IAR + +SAV+SG+KE+RE +E A++ + G RT+L +DE+HRFNK+Q D Sbjct: 129 SLVQTIARAVSYRFVALSAVSSGLKEVRETLEEAKRLQKFGERTLLLLDEIHRFNKAQLD 188 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 FLP +E G I IGATTENPSFE+N+ALLSR +V L L + I +L +A+ DK +G Sbjct: 189 VFLPCVEAGHIVLIGATTENPSFEINAALLSRCKVLTLNKLQPDHIRSLLDRAISDKEKG 248 Query: 185 Y--------GGQDIVLPDETRRAIAELVNGDARRALNTLEMM--ADMAEVDDSGKRVLKP 234 I + + +A+ +GDAR ALNTLE+ A A + + +R Sbjct: 249 LMVSLAGSAAEDVIKVEQDALEFLADAADGDARVALNTLELAGLAAFASWESTPRRPCSA 308 Query: 235 ELLTEIA--------GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 + + I FD G+ Y+++SAL KS+RG PDAA+YW AR++ G Sbjct: 309 DKASTILADANAKAIQRSYFLFDKSGEEHYNIVSALIKSMRGGDPDAAIYWLARMLEGGE 368 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 PLY+ARR + ASEDVG +DP+A+ +A+A + +G E +AQ + YL APKS Sbjct: 369 GPLYIARRLIRFASEDVGLSDPQALVLAVACYQACHFIGMPECNVNLAQCVTYLTLAPKS 428 Query: 347 NAVYTAFKAALADARER-PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVY 405 VY A +AA + + VP+HLRNAPT+LMK+ H + + Sbjct: 429 VVVYHAVEAAQRLVKGAKKNEPVPMHLRNAPTQLMKD----------HSYDRQAEPAD-F 477 Query: 406 FPPEIAQTRYYF 417 PP + ++ Sbjct: 478 LPPSLRGQKFLK 489 >UniRef50_B6K1T7 DNA-dependent ATPase MGS1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K1T7_SCHJY Length = 514 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 166/440 (37%), Positives = 240/440 (54%), Gaps = 25/440 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R+RP+ L Y+GQ+ L+ G + IE SMILWG G GKTTLA +IA+ Sbjct: 87 RPLAERVRPKTLDDYVGQESLVGKGGIIRNLIERDECPSMILWGNSGVGKTTLARIIAKT 146 Query: 74 ANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 A +SA ++ V + R+ E ++ R G++TI+F+DEVHRFN++QQD FLP +E Sbjct: 147 TGAHFLEVSATSASVSDCRKIFEESQNLLRLTGKKTIVFLDEVHRFNRAQQDIFLPMVEK 206 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT NPSF LNSALLSR V+ L +++ +L +AM+ ++ + + L Sbjct: 207 GLITL------NPSFRLNSALLSRCSVFTFNVLDKDNVLSILRRAMQIESER-KERKLEL 259 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 + + I+ + +GDAR ALN LE+ M E + L + + +D+ G Sbjct: 260 DESILQHISAICDGDARVALNCLEIALGMLEGGS-----VSLPDLKKKFARSFSVYDSTG 314 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D YD ISA HKS+RGS DAALY+ R++ +G DPLYVARR + IASEDVG D + Sbjct: 315 DAHYDTISAFHKSIRGSDVDAALYYLCRMLESGEDPLYVARRMVRIASEDVGLGDNSLLP 374 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP---DYDVP 369 +A AA+ ++G E + +A LA APK+ VY A+K + P +P Sbjct: 375 LASAAFTATQQIGMPEADVVLAHCAAALALAPKNVDVYRAYKRVKSFVASDPEAGRAQIP 434 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF--------PTNR 421 +HLRNAPTKLMKE+GY + Y+Y D + + Y P + R++ P Sbjct: 435 MHLRNAPTKLMKELGYNKGYKYNPDYKDGRVKQD-YLPKPMKDKRFFRIPMDLPVDPDLD 493 Query: 422 GLEGKIGEKLAWLAEQDQNS 441 E + E + +N Sbjct: 494 ADESSVTELQEERRTEKRND 513 >UniRef50_Q9WYX8 UPF0189 protein TM_0508 n=15 Tax=cellular organisms RepID=Y508_THEMA Length = 599 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 157/432 (36%), Positives = 237/432 (54%), Gaps = 21/432 (4%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEV 69 + +PL+ +RP++ ++GQ H+ L R ++ G++ S IL+GPPG+GKT++ + Sbjct: 2 SISEKPLSELLRPKDFEDFVGQDHIFGNKGILRRTLKTGNMFSSILYGPPGSGKTSVFSL 61 Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 + RY N +V +S+ GV EI+ ++R Q R G++ +LF+DE+HR NK+QQ + H Sbjct: 62 LKRYFNGEVVYLSSTVHGVSEIKNVLKRGEQLRKYGKKLLLFLDEIHRLNKNQQMVLVSH 121 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 +E G I + TTENPSF + ALLSR R+ K LS ED+ ++L +A E + Sbjct: 122 VERGDIVLVATTTENPSFVIVPALLSRCRILYFKKLSDEDLMKILKKATEVL-------N 174 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 I L + +AI GDAR+ LNTLE++ + + E L + G S Sbjct: 175 IDLEESVEKAIVRHSEGDARKLLNTLEIV-----HQAFKNKRVTLEDLETLLGNVSGY-- 227 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 + YD SA KS+RGS P+AA+Y+ ++I G DP ++ARR + ASEDVG ADP Sbjct: 228 -TKESHYDFASAFIKSMRGSDPNAAVYYLVKMIEMGEDPRFIARRMIIFASEDVGLADPN 286 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ +A++ VG E + + VYL+ APKSN+VY A K +E P DVP Sbjct: 287 ALHIAVSTSIAVEHVGLPECLMNLVECAVYLSLAPKSNSVYLAMKK----VQELPVEDVP 342 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGE 429 + LRN T+ MK+ GYG+ Y Y HD + Y P ++ + P G E ++ E Sbjct: 343 LFLRNPVTEEMKKRGYGEGYLYPHDF-GGFVKT-NYLPEKLKNEVIFQPKRVGFEEELFE 400 Query: 430 KLAWLAEQDQNS 441 +L L + Sbjct: 401 RLRKLWPEKYGG 412 >UniRef50_UPI0000D57862 PREDICTED: similar to werner helicase interacting protein n=1 Tax=Tribolium castaneum RepID=UPI0000D57862 Length = 494 Score = 463 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 164/418 (39%), Positives = 247/418 (59%), Gaps = 31/418 (7%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI---- 70 PLA +++P+ L ++GQ H+L L +E G + +M+LWGPPG GKT+L+ VI Sbjct: 93 PLAKQLQPKCLDDFMGQSHVLGENTVLRTLLEKGDIPNMVLWGPPGCGKTSLSGVIQGIC 152 Query: 71 -ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 + + A T+GVK+++ + A+ + G RT+LF+DE+HRFNK QQD FL H Sbjct: 153 KSNPTKLKFVSLCAATAGVKDVQNIVSAAKLQQKFGCRTVLFMDEIHRFNKKQQDIFLLH 212 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAM-----EDKTRG 184 +E G I +GATTENPSF +NSALLSR RV +L+ L + + Q+L + E +G Sbjct: 213 VEKGDIILVGATTENPSFTVNSALLSRCRVIVLQKLDPDCLYQILERGARNFNVEVVDKG 272 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 + + + + +A++ +GDAR AL L+++ ++ +V+ E + E + Sbjct: 273 ARSKGFAVQADALKWLADISDGDARIALGNLQLVLQY---NEDKNKVVTIEDIKEKIKKS 329 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVG 304 +D KG+ Y++ISA+HKS+RGS P+AALYW R+I +G DPLY+ARR + ASED+G Sbjct: 330 HLLYDRKGEEHYNVISAMHKSIRGSDPNAALYWTTRMIVSGEDPLYIARRMVRAASEDIG 389 Query: 305 NADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR--E 362 NADPRA+Q+A++ +G E + +AQ +YLA APKS +A A + E Sbjct: 390 NADPRALQLAVSTMQGCQLLGMPECDVLLAQCAIYLARAPKSREADSALARAKQLIKSCE 449 Query: 363 RPDYDVPVHLRNAPTKLMKEMGYGQ---EYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 VP+HLRNAPT+LMK++GYG+ + RY Y PPE+ ++ Sbjct: 450 GLQPSVPMHLRNAPTRLMKDLGYGKLEGDERY-------------YMPPELKNVDFFK 494 >UniRef50_C7NB61 AAA ATPase central domain protein n=12 Tax=Fusobacteriaceae RepID=C7NB61_LEPBD Length = 409 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 152/427 (35%), Positives = 241/427 (56%), Gaps = 30/427 (7%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA R RP++L + GQ+ L+ L + IE G+ + I WG PGTGKTTLAE+I+ Sbjct: 12 KPLAFRYRPKSLDDFYGQKRLVGENGILRKIIERGNFMNAIFWGAPGTGKTTLAEIISNK 71 Query: 74 ANADVERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 N E ++A+ + V +I+E E+A G++T+LF+DE+HRFNK QQD+ L +E+ Sbjct: 72 MNYHYEYLNAIKASVADIKEISEKAANRFHMNGQQTLLFLDEIHRFNKLQQDSLLQDLEN 131 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G I IGATTENP + LN+ALLSR + K LS +++ ++L E ++ + Sbjct: 132 GNIILIGATTENPYYNLNNALLSRCLAFEFKKLSEKNLMEILKNINEK-------ENFGI 184 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ I+E++ GDAR+A+N LE++ ++ E + EI + + K Sbjct: 185 SDDILEYISEIIEGDARQAINILELITNVG-------VEFTLEEVKEILNTKKSYH--KT 235 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + Y+ ISA+ KS+RGS PDA +YW A++++ G D LY+ARR + +ASED+G A+P+A+ Sbjct: 236 EDKYNTISAMIKSIRGSDPDATVYWMAKMLSGGEDILYIARRLVILASEDIGLANPQALP 295 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A+A + +G E +++ +YLA +PKSN+ Y A +AL +VPVHL Sbjct: 296 IAVAGLNAIKEIGMPEARIILSEVAIYLAISPKSNSAYNAINSALKHIENEKIQEVPVHL 355 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 ++G + Y+Y HD N Y +VY ++ +Y E E L Sbjct: 356 --------TKVGV-KAYKYPHDYENHYV-EQVYMNEKMK---FYEHGENKFEKAADEWLK 402 Query: 433 WLAEQDQ 439 + + + Sbjct: 403 KIKKNQK 409 >UniRef50_A5V4N3 Recombination protein MgsA n=171 Tax=Bacteria RepID=A5V4N3_SPHWW Length = 481 Score = 462 bits (1190), Expect = e-129, Method: Composition-based stats. Identities = 196/430 (45%), Positives = 273/430 (63%), Gaps = 11/430 (2%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP LA IGQ+HL + R + AG L S++LWGPPGTGKTT+A ++A Sbjct: 63 PLAERLRPRTLADVIGQEHLTGPEGAIGRMVAAGRLSSLVLWGPPGTGKTTIARLLADAV 122 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 +SAV SGV ++++ AR++ G RT+LFVDE+HRFN++QQD+FLP++EDGT Sbjct: 123 GLRFAPVSAVFSGVADLKKIFAEAREHARIGTRTLLFVDEIHRFNRAQQDSFLPYVEDGT 182 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 + +GATTENPSFELN+ALLSRA+V +L L + +++ +A E + R + L + Sbjct: 183 VVLVGATTENPSFELNAALLSRAQVLILNRLDAAALGKLIARAEEIEER-----ALPLTE 237 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 R A+ +GD R LN E + +A L+P L + R A +D + Sbjct: 238 GAREALVASADGDGRFLLNQAETLFSIAI-----DHPLEPGELAALLHRRMAVYDKDREG 292 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 Y+LISALHKS+RGS P AALY+ AR++TAG +PLYV RR + ASED+G ADP+A+ Sbjct: 293 HYNLISALHKSLRGSDPQAALYYLARMLTAGEEPLYVLRRLVRFASEDIGLADPQALVQC 352 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 +AA D + +G EGE AI QA +YLA APKSNA Y A KAA A++ P ++ N Sbjct: 353 LAAKDAYDFLGSPEGELAIVQACLYLATAPKSNAAYAAQKAAFRSAKDTGSLMPPKNILN 412 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 APT+LMK++GYG+ Y Y HD +A+ +G+ Y+P E+A +Y P+ RG E KI E++A+ Sbjct: 413 APTRLMKDVGYGKGYAYDHDAEDAF-SGDDYWPEEMAPQSFYVPSPRGFEAKIAERIAYW 471 Query: 435 AEQDQNSPIK 444 Q K Sbjct: 472 DRLRQERGGK 481 >UniRef50_Q8RGJ6 ATPase associated with chromosome architecture/replication n=9 Tax=Fusobacterium RepID=Q8RGJ6_FUSNN Length = 407 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 164/425 (38%), Positives = 250/425 (58%), Gaps = 30/425 (7%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA ++RP++L ++GQ+ LL + R I L + I +GPPG GK++L E+I+ Sbjct: 12 EPLAYKLRPKSLDDFVGQEKLLGKDGVITRLILNSTLSNSIFYGPPGCGKSSLGEIISNT 71 Query: 74 ANADVERISAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + + E+++A T+ V +IR +E AR+N +RTILF+DE+HRFNK+QQDA L + ED Sbjct: 72 LDCNFEKLNATTASVSDIRNVVETARRNIELYNKRTILFLDEIHRFNKNQQDALLSYTED 131 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 GT+T IGATTENP + +N+ALLSR V+ K+L+ EDI +++ + G +I + Sbjct: 132 GTLTLIGATTENPYYNINNALLSRVMVFEFKALTNEDILKLIDK-------GLNFLNICM 184 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ + I ++ GD+R ALN +EM ++ + + + I ER FD K Sbjct: 185 GDKIKEIIVDISQGDSRIALNYVEMYNNIHSQ-------MSEDEIFSIFKERQVSFDKKQ 237 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D+ YD+ISA KS+RGS PDAA+YW AR++ G DP Y+ARR ASED+G A+P A+ Sbjct: 238 DK-YDMISAFIKSIRGSDPDAAVYWLARLLDGGEDPKYMARRLFIEASEDIGMANPEALL 296 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 VA AA + ++G E +A +YLA + KSN+VY A ALAD ++ +VP+++ Sbjct: 297 VANAAMNACEKIGMPEVRIILAHTTIYLAISSKSNSVYEAIDGALADIKKGELQEVPMNI 356 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 + Y+Y H+ + + + Y + +YY P N E I EKLA Sbjct: 357 CH----------DNVGYKYPHNYTDNFIK-QKYMN---KKRKYYKPGNNKNEKLIAEKLA 402 Query: 433 WLAEQ 437 L ++ Sbjct: 403 KLWDE 407 >UniRef50_B1KXC3 ATPase, AAA family n=17 Tax=Clostridium RepID=B1KXC3_CLOBM Length = 416 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 141/426 (33%), Positives = 226/426 (53%), Gaps = 10/426 (2%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA MRP+ L ++GQ+H+L+ KPL ++ + + I +GPPGTGKTTLA ++A Sbjct: 1 MRPLADLMRPKKLEDFVGQKHILSENKPLYNLMKNKSICNSIFYGPPGTGKTTLANIMAN 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 Y + R++A T+ +K+I+E N +L++DE+ F K QQ A L IED Sbjct: 61 YVDKKFYRLNATTASIKDIQEITSSINSLLNYS-GVVLYIDELQHFTKKQQQALLEFIED 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G + I +TTENP F ++ A+LSR ++ K L+ EDI L +A+ G +I Sbjct: 120 GRVILIASTTENPYFVIHKAILSRCNIFQFKPLNREDIILGLEKAINKL--IDKGINIKY 177 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 E+ I E+ GD R+A N LE+ + + + +A + R D G Sbjct: 178 SFESLEYIGEICQGDYRKAYNILELAV---NSHCGFNIEITLDYIESLAQS-NIRADATG 233 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D +Y+++SA KS+RGS DAA+++ AR+I +G D + RR + +ED+G A P A+ Sbjct: 234 DEYYNILSAFQKSIRGSDADAAVHYLARLIKSG-DITSITRRLSVMVAEDIGLAYPNALT 292 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + + + +VG E + +++ +YLA PKSN+ Y A K A+ D DVP +L Sbjct: 293 IVNSGIELALKVGFPEAQIILSEITIYLATLPKSNSAYIAIKNAMRDLESVNFGDVPDYL 352 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +++ K +G + Y+Y HD N Y + E Y P E+ YY + E + + Sbjct: 353 KDSHYHGAKNLGV-EGYKYPHDFNNHYVSQE-YLPKELKDKVYYIAQHNKYEENLKKYWE 410 Query: 433 WLAEQD 438 + + Sbjct: 411 NIKKFK 416 >UniRef50_B2THM3 ATPase, AAA family n=25 Tax=Clostridiaceae RepID=B2THM3_CLOBB Length = 428 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 148/434 (34%), Positives = 231/434 (53%), Gaps = 10/434 (2%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 PLA MRP + ++GQ+H+L PL I++ + + I +GPPGTGKTTLA ++A+ Sbjct: 1 MSPLADLMRPSKIEDFVGQRHILGENTPLYNLIKSKKICNCIFYGPPGTGKTTLANIMAK 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 Y + +++A T+ VK+I+ N +L++DE+ FNK QQ + L IED Sbjct: 61 YVDKKFYKLNATTASVKDIQNITNELDNLLNYA-GVVLYIDELQHFNKKQQQSLLEFIED 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IT I +TTENP F ++ A++SR ++ + L DI L ++++ G ++ Sbjct: 120 GRITLIASTTENPYFVIHKAIISRCNIFAFEPLIISDIIVGLEKSLDKL--INEGIEVTY 177 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 +E + IAE+ GD R+A N LE+ + + + + + + G+ + R DN G Sbjct: 178 SNEALKYIAEISQGDYRKAYNILELSI---NSQMTLHKEISVDYIEK-LGQSNMRADNSG 233 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D FY+L+SAL KS+RGS DAA+++ AR+I G + + RR I +ED+G A P A+ Sbjct: 234 DEFYNLLSALQKSIRGSDSDAAIHYLARLIKGG-NIAAIIRRISVIVAEDIGLAHPNALT 292 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 V + D +VG E +A+ ++YLA PKSN+ Y A +A+ D DVP HL Sbjct: 293 VVNSGLDLAMKVGFPEARIVLAELVIYLATLPKSNSAYLAINSAMNDLESINFGDVPKHL 352 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 ++ + +G G Y+Y HD N Y E Y P E+ + RYY N E I + + Sbjct: 353 KDGHYAGAESLGVG-GYKYPHDYPNHYIKQE-YLPTELKKKRYYIEQNNKYEENIRKYWS 410 Query: 433 WLAEQDQNSPIKRY 446 + Y Sbjct: 411 SIKNNSNELTKAEY 424 >UniRef50_B1HUL5 Putative uncharacterized protein n=4 Tax=cellular organisms RepID=B1HUL5_LYSSC Length = 420 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 148/428 (34%), Positives = 228/428 (53%), Gaps = 13/428 (3%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 MRP L + +G Q + L + I+ H+ SM+L+G PG GKT++A IA + Sbjct: 1 MRPLTLDEIVGHQDFIGPNTALYKMIQNEHVPSMLLYGEPGIGKTSIANAIAGSSQLPFF 60 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 ++A +G K++ + ++ AR + +LF+DE+HRFNK QQD LPH+E+G+I IG Sbjct: 61 ALNATRAGKKDVEDIVQEAR----ISGKVLLFLDEIHRFNKLQQDTLLPHVENGSIVLIG 116 Query: 140 ATTENPSFELNSALLSRA-RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRR 198 ATTENP ++N A+ SR +Y LK L+ E++ +++ +A+ D+ RG G +L D Sbjct: 117 ATTENPYHDVNPAIRSRCGEIYQLKRLTKENLMELVEKALADEKRGLGKYHFILTDSQIE 176 Query: 199 AIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDL 258 IAE NGDAR+AL LE + A + G + ++ + D KG FY+L Sbjct: 177 RIAEAANGDARKALTLLESIY-YASDEVEGPTIAADHIIDHLISRIGVYGDKKGSHFYNL 235 Query: 259 ISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAW 318 +SAL KSVRGS +AALY+ A ++ G D + V+RR L +A ED+G A+P +AA Sbjct: 236 LSALQKSVRGSDTNAALYYLAHLLETG-DLVAVSRRLLVMAYEDIGLANPEVGPHMLAAV 294 Query: 319 DCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTK 378 R+G E +A A++ + A KSN+ A A+ + +P HLR+A Sbjct: 295 QAAERLGLPEARIPLASAVIEMCLASKSNSAILAIDEAIKAIHDGKTGGIPHHLRDAHYA 354 Query: 379 LMKEMGYGQEYRYAHDEA----NAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 K++G+ Y+Y H+ + + Y P E+ T +Y P G E ++ L Sbjct: 355 GAKDLGH-VGYQYPHNTPIGTFGGWVDQQ-YLPDELVGTEFYKPVVAGEEKRMASIYEKL 412 Query: 435 AEQDQNSP 442 QN Sbjct: 413 KSFHQNKK 420 >UniRef50_C9M5W8 Replication-associated recombination protein A n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M5W8_9BACT Length = 426 Score = 456 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 174/433 (40%), Positives = 245/433 (56%), Gaps = 17/433 (3%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA RMRP +L +Y G +LA G PL R +E G + S IL+GPPG GKT L ++ R Sbjct: 7 PLAERMRPRSLDEYRGHSSILAPGAPLRRFLEEGDVPSCILYGPPGVGKTALVRLMGRVT 66 Query: 75 NADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 ++ I+AV++ V E+R+ ++RA R +GR I FVDE++ FN+SQQDA LP +E G Sbjct: 67 GRELLEINAVSAKVSELRDLVDRAADLRRLSGRSAIAFVDELYHFNRSQQDALLPSVERG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + +G TTENP FE+N LLSR V+ + L ED+ ++L A+ D+ RG G ++ Sbjct: 127 EVILVGTTTENPRFEINKTLLSRLLVFEIGPLEKEDLVEILKSALTDRERGLGELELSAS 186 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 D+ AIA GD R+AL LE ++ + SG+R ++ + LT+ R D + D Sbjct: 187 DDVIEAIAASAGGDGRQALTRLEFLSR--AIAVSGRRTIEEDDLTKSLPAAFVRHDRRQD 244 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y +ISA+ KS+RGS PDAA+YW AR+I G D ++ARR + +A+EDVG ADP+A+ V Sbjct: 245 DHYAVISAMIKSIRGSDPDAAVYWLARLIEGGEDVRFIARRLMILAAEDVGLADPQALVV 304 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A A D RVG E +++ +YLA APKSN+ Y A A R VP HL Sbjct: 305 ATAGADAADRVGWPEARIILSEVALYLAAAPKSNSAYLAVGKAQDAIRRGDLLAVPSHLI 364 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 N Y+Y HD N + A + Y P R+Y P + G+E +I +LA Sbjct: 365 NGQP----------GYQYPHDFPNHWTA-QAYLP---KPRRFYEPGSMGVESRIAARLAM 410 Query: 434 LAEQDQNSPIKRY 446 + Q K Sbjct: 411 FWRRFQEKDEKSG 423 >UniRef50_A5DW03 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DW03_LODEL Length = 839 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 170/465 (36%), Positives = 242/465 (52%), Gaps = 58/465 (12%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA R+RP+ L +IGQ+ L+ PL I+A + S +LWGPPG GKTT+A +IA+ Sbjct: 182 PLAHRVRPKTLDDFIGQEKLVGENAPLRNLIQADLIPSFLLWGPPGCGKTTIARIIAKST 241 Query: 75 NADVERISAVTSGVKEIREAIERARQ-NRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + +S S K +++A +A + G+RTILF+DE+HR+NK+ QD LP IE G Sbjct: 242 DYRYVELSGADSNAKSLKDAFAQADNLKKLTGQRTILFLDEIHRYNKAVQDLLLPVIERG 301 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED----KTRGYGGQD 189 T T IGATTENPSF LN+ALLSR ++++ L+T + ++L +A+ D + + Sbjct: 302 TCTVIGATTENPSFNLNNALLSRLHTFVMEPLTTTAVVRILHRALYDINQLRKNLFQLHY 361 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEV------------------------- 224 + L + IAEL GD+R ALN LE + Sbjct: 362 MTLENGAFTYIAELCMGDSRVALNILETVNAYLSSAKFKTELQTKVAQETKPQEEQARDE 421 Query: 225 ----------------------DDSGKRVLKPELLTEIAGERSA--RFDNKGDRFYDLIS 260 G + LL +I R+ +D GD YD+IS Sbjct: 422 KVEDRHHGREGRGNHEEEGLTTPKQGVIKVSEYLLRQILQTRNFHQLYDRNGDGHYDVIS 481 Query: 261 ALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDC 320 A HKSVRGS DAA+++ ++++ G DPL++ RR + IASED+G D + +AA + Sbjct: 482 AFHKSVRGSNADAAIFYLVKMLSGGEDPLFILRRMIVIASEDIGLRDSSCLPFMVAAKEA 541 Query: 321 FTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP---DYDVPVHLRNAPT 377 VG EGE +A LA APKS Y + + A A +E P VP HLRNAPT Sbjct: 542 VEFVGMPEGEIILAHCANKLARAPKSTKSYRSLRTAQAYIQEHPEITRLPVPFHLRNAPT 601 Query: 378 KLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRG 422 K MKEMG+G EY+Y N ++YFP + + ++ T+ G Sbjct: 602 KFMKEMGFGDEYKYNPRYENGIVR-QLYFPEGMEEPKFLEDTHLG 645 >UniRef50_A0Q7R7 AAA family-ATPase n=19 Tax=Francisella RepID=A0Q7R7_FRATN Length = 412 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 168/429 (39%), Positives = 245/429 (57%), Gaps = 18/429 (4%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 + PLAAR+RP+++ + +GQ+HLL+ L + + + S++L G PG GKT+LA +I Sbjct: 1 MKYIPLAARIRPQSIDEIVGQEHLLSQHGILTKILAGDGICSLVLCGKPGVGKTSLARII 60 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A + +SAV SGVK+I++ I + + +LF+DE+HRFNKSQQD LP++ Sbjct: 61 ASSKKLEFFELSAVDSGVKDIKKLITDNQHLDSF----VLFLDEIHRFNKSQQDILLPYV 116 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G I IGATTENP++ LN AL+SR + LK LS ++++ + + Sbjct: 117 ESGKIILIGATTENPTYYLNDALVSRLFILRLKRLSLVATQKLIEKTLSQDE-VLAKHKF 175 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 + D ++ GD R+ LN LE M ++ D + L EL + GE S F Sbjct: 176 KIDDGLYNSMHNYSEGDCRKILNLLERMFLISTRGD--EIYLNKELFDQAVGETSRDFHR 233 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 +G FY+ +SA HKSVRG+ PDAA++W + ++ G DPL +ARR L IASED+GNADP+A Sbjct: 234 EGKEFYEQLSAFHKSVRGTDPDAAIFWLSVMLDNGVDPLVIARRMLCIASEDIGNADPQA 293 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 ++VA+ AW+ + ++G EG +AQA +YLA APKSNA Y A A + + DVP Sbjct: 294 LRVAMDAWNAYEKLGMPEGRLVLAQAAIYLAVAPKSNACYKALAQAQQLVKSLGNIDVPQ 353 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 HL+N K Y Y H+ N+Y + Y P I +Y PT G E KI K Sbjct: 354 HLKN--YKDS-------NYLYPHNYPNSYVIQQ-YLPDNII-QNFYQPTASGFEAKIKTK 402 Query: 431 LAWLAEQDQ 439 L + + + Sbjct: 403 LDSINKIKK 411 >UniRef50_Q4P896 Putative uncharacterized protein n=2 Tax=Ustilaginomycotina RepID=Q4P896_USTMA Length = 566 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 169/428 (39%), Positives = 238/428 (55%), Gaps = 29/428 (6%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +P A RMRP+ L +Y+GQ ++ PL + G + SMILWGPPGTGKTTLA ++A+ Sbjct: 26 KPFAERMRPQTLDEYVGQSDVV--NGPLKMLLRQGKIPSMILWGPPGTGKTTLARLLAKS 83 Query: 74 -----ANAD-------VERISAVTSGVKEIREAIERARQNR-NAGRRTILFVDEVHRFNK 120 + ISA SG ++++ ++ A +RT+LF+DE+ RFN+ Sbjct: 84 ASSTDSTCRQGPPPHRFVEISATNSGANDVKKILDEALHRLELTAQRTLLFIDEIQRFNR 143 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +QQD LP +E G I + ATTENPSF L SAL+SR RV++L LS ++ QVL A+ Sbjct: 144 AQQDVLLPAVEKGQIVLVAATTENPSFRLQSALISRMRVFVLTKLSVDECCQVLRNALAS 203 Query: 181 KTRGYGGQD--------IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVL 232 R D + + R IA + +GDAR AL LE+ + + Sbjct: 204 VKRESDQADQHAECVAAAYIDEHLIRWIANMADGDARTALGALELALSTTDASVCSAENV 263 Query: 233 KPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVA 292 L + ++D GD YD ISALHKS+RGS DAALYW AR++ +G D L++A Sbjct: 264 S--RLKTALKRTALQYDRTGDMHYDTISALHKSIRGSDADAALYWLARMVCSGDDALFIA 321 Query: 293 RRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTA 352 RR + ASED+ A+Q+A A + VG E +AQ +V+LA +PKS Y A Sbjct: 322 RRLIVAASEDIDT--LAALQMATATYQACQVVGLPECGNNLAQCVVFLAESPKSTRSYRA 379 Query: 353 FKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQ 412 + A A ++ VP+H+RNAPTKLM E+GYG+EYRY A+ + +FPP++ Sbjct: 380 WNKAKALVEGGYNHPVPLHIRNAPTKLMNEIGYGKEYRYEPRFAH--PVYQEFFPPQLKG 437 Query: 413 TRYYFPTN 420 TR PT Sbjct: 438 TRLLSPTP 445 >UniRef50_C6BV47 AAA ATPase central domain protein n=12 Tax=Desulfovibrionales RepID=C6BV47_DESAD Length = 420 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 167/429 (38%), Positives = 235/429 (54%), Gaps = 28/429 (6%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 + L+ +DN QPLA R+RP+ + ++ GQ H+ + R + L S++L+GPPG GK Sbjct: 1 MKLELTDN--QPLADRIRPKKIDEFFGQNHIRERVEAFER---SKRLPSLLLFGPPGCGK 55 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ 123 +TLA ++A+ RISA SG+ +R+ IL +DE+HRF+K+QQ Sbjct: 56 STLAMLLAKSTGRHFMRISAPESGITALRK---------QLAGMDILILDELHRFSKAQQ 106 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLP +E G IT + TTENPSF + LLSR V L+SL D+ + +A E+ Sbjct: 107 DFFLPILESGEITLLATTTENPSFSVTRQLLSRLHVLRLRSLGKTDLLAICNRACEELE- 165 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE 243 I L +++ I + GD R LN LE + E L +I E Sbjct: 166 ------IELSEDSLNLITSMAGGDGRSLLNLLE------YTSQLPAEKREAENLRKILPE 213 Query: 244 RSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 R D GD Y+L SAL KS+RGS PDAALY+ +I +G DP ++ RR + A ED+ Sbjct: 214 TVIRGDRDGDSHYELASALIKSIRGSDPDAALYYLGCLIESGEDPKFITRRLIISAGEDI 273 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G ADP AM +A++ +G EG +++A+VYLA APKSN+ Y A+ + R+ Sbjct: 274 GLADPYAMTMAVSCQQAVEFIGMPEGFIPLSEAVVYLALAPKSNSTYAAYHTVKQEIRQN 333 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGL 423 VP+HLRNA T L KE GYG+ Y Y H N+Y E Y PPEIA +Y P ++G Sbjct: 334 GMLPVPLHLRNATTSLQKEWGYGRNYLYPHSYPNSYVEQE-YLPPEIADRMFYDPKDQGE 392 Query: 424 EGKIGEKLA 432 E ++ L Sbjct: 393 EPRLNAWLK 401 >UniRef50_A5V6U8 Recombination protein MgsA n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V6U8_SPHWW Length = 444 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 181/443 (40%), Positives = 248/443 (55%), Gaps = 11/443 (2%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 + S D +PLA R+RP + +GQ+HL PL R + A L S+I WGPPG Sbjct: 9 PDASSVPCDVETRPLAERLRPTRIEDVVGQEHLTGPDAPLARMVAARRLSSIIFWGPPGI 68 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 GKTTLA ++A E SA V ++ A A+++ G+RT+LF+DE HR ++ Sbjct: 69 GKTTLARLLADLVGMRFEAFSATDVTVAGLKAAYAEAKRHLRMGKRTVLFLDESHRAARN 128 Query: 122 QQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDK 181 + LP +EDGTIT I ATTE PSF L + SRARV L L T + Q+L +A Sbjct: 129 ITETLLPVMEDGTITAILATTEAPSFTLPKGITSRARVLTLNPLDTGGLTQLLDRA---- 184 Query: 182 TRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIA 241 + G + L DE R A+ E GD R LN +E + D L PE L I Sbjct: 185 -EQHCGVQLNLTDEARIALFEQAGGDGRYFLNMVEDLL-----DAPAMEPLAPEDLRRIL 238 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 R A +D +GD Y+L SA KS+RGS PDAALY+ AR++ AG DP ++ RR L +ASE Sbjct: 239 SRRIANYDRQGDGHYELASAFQKSIRGSDPDAALYYGARLVQAGEDPRFILRRLLVMASE 298 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 +V ADP + V AA D F VG E + A+AQAIV +A APKSNAVY A+K A+A A Sbjct: 299 EVAMADPTILGVVAAALDTFQHVGMPEAKYALAQAIVAVATAPKSNAVYLAWKQAMALAE 358 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR 421 P+ P + NAPT+L + +G+ +Y Y+HD NA+ + + Y+P E+ + R+Y P R Sbjct: 359 ATPNVRPPRRILNAPTELHRSLGFKTDYEYSHDWPNAF-SAQNYWPDELGRHRFYAPNER 417 Query: 422 GLEGKIGEKLAWLAEQDQNSPIK 444 G E I ++ + + Sbjct: 418 GFEATIKRRVEHWNGLREERDRR 440 >UniRef50_Q04QW6 Holliday junction resolvase helicase subunit-like ATPase n=4 Tax=Leptospira RepID=Q04QW6_LEPBJ Length = 423 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 160/447 (35%), Positives = 234/447 (52%), Gaps = 27/447 (6%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L F+ PLA ++RP + IGQ + + + S+IL+GPPG Sbjct: 1 MSDL---FTKKPIPPLAHKIRPSGFEEVIGQ------TRATKQLVNYRSPVSIILYGPPG 51 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 TGK+TLA ++ R N +AV++GV EI++ +ERA + +LF+DE+HRF+ Sbjct: 52 TGKSTLAGILCRKWNLPFVEYNAVSTGVSEIKKLLERAEREGTI----LLFLDEIHRFSA 107 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 SQQD+ L +E G + IGATTENP+F + LLSR ++ ++ LS E+ +L + +++ Sbjct: 108 SQQDSLLKGVETGHLVLIGATTENPAFRITRPLLSRCQILKIEPLSWEEQSLLLERGIQN 167 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 I L + + GD R+ L+ LE ++ + + E Sbjct: 168 LEYS-----IHLNPGAKETLIRFSGGDGRKLLSNLEGLS----FSFPENHTISKSDVEEY 218 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 R +D G+ YD+ISA KSVRGS PDAALY+ A ++ G DPL++ RR + +AS Sbjct: 219 LESRVIEYDKSGESHYDVISAFIKSVRGSDPDAALYYLAVLLEGGEDPLFIMRRLIILAS 278 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVGNA + +A++ +G EG +A +LA PKSNA Y AAL+ Sbjct: 279 EDVGNASVNGLPLAVSGLHALEAIGMPEGRLVLAHVTTFLASCPKSNASYKGIGAALSFV 338 Query: 361 RERPDY-DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIA--QTRYYF 417 RE+ +P LRNAPT L K+ G Q Y Y HD + YFP E A R+YF Sbjct: 339 REKGTGIKIPNRLRNAPTFLHKKEGASQGYLYPHDFGG--FKEQNYFPDEFAENPPRFYF 396 Query: 418 PTNRGLEGKIGEKLAWLAEQDQNSPIK 444 PT G E K+ E L + E+ + Sbjct: 397 PTGNGAELKLKEYLDRVWEKFSSRDDP 423 >UniRef50_P40151 DNA-dependent ATPase MGS1 n=12 Tax=Saccharomycetaceae RepID=WRIP1_YEAST Length = 587 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 168/431 (38%), Positives = 248/431 (57%), Gaps = 28/431 (6%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAA-GKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 + PL+ ++RP+ L Y+GQQH+L+ L + I+ G + SMILWGPPG GKT+LA Sbjct: 129 KISHLPLSEKLRPKELRDYVGQQHILSQDNGTLFKYIKQGTIPSMILWGPPGVGKTSLAR 188 Query: 69 VIARY---------ANADVERI--SAVTSGVKEIREAIERARQN-RNAGRRTILFVDEVH 116 ++ + + I SA + +E+R E++++ + RRT+LF+DE+H Sbjct: 189 LLTKTATTSSNESNVGSRYFMIETSATKANTQELRGIFEKSKKEYQLTKRRTVLFIDEIH 248 Query: 117 RFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQ 176 RFNK QQD LPH+E+G I IGATTENPSF+LN+AL+SR +++L+ L+ ++ VL++ Sbjct: 249 RFNKVQQDLLLPHVENGDIILIGATTENPSFQLNNALISRCLIFVLEKLNVNELCIVLSR 308 Query: 177 AME-----DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRV 231 + K + L + +L GD RRALN LEM+ + + Sbjct: 309 GIALLNKCRKQVWNIENPLKLSRSILEYVVDLSVGDTRRALNMLEMIEVSTRERKADEEE 368 Query: 232 LKPELLTEIAGERSAR-----FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 L + + +I S+ +D KGD YD ISA HKS+RG +A+LY+ AR++ G Sbjct: 369 LSIDDVRDIIKNNSSNGLNTYYDPKGDNHYDTISAFHKSIRGGDENASLYYLARMLQGGE 428 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKS 346 DPLYVARR + IASED+G D + +A+AA D +VG E + A+AQ V LA APKS Sbjct: 429 DPLYVARRMIRIASEDIGLRDSSLLPLAVAAHDAVMKVGLPEADLALAQCCVALARAPKS 488 Query: 347 NAVYTAFKAALADARER----PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAG 402 +Y A+K A E ++P+H+RNAPTKLM+E+GY + Y+Y D Sbjct: 489 VELYRAWKKLRAMMSENMYSLASSEIPMHIRNAPTKLMEELGYHKGYKYNPDYIEGKV-Q 547 Query: 403 EVYFPPEIAQT 413 + YFP E+ + Sbjct: 548 QDYFPKEVLEK 558 >UniRef50_C7LWR1 AAA ATPase central domain protein n=3 Tax=Desulfovibrionales RepID=C7LWR1_DESBD Length = 430 Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 162/434 (37%), Positives = 240/434 (55%), Gaps = 26/434 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +RPE+L +IGQ H L +++ L S++L+GPPG GK+T+A ++A++ Sbjct: 19 RPLAESLRPESLDDFIGQSHFRQR---LRTLMQSKDLPSLLLFGPPGCGKSTVALLLAKH 75 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 A+ R+SA G+ +R+ I+ + IL +DE+HR++K+QQD FLP +E G Sbjct: 76 ADKPFVRVSAPEVGITALRKQIQD---------KEILILDELHRYSKAQQDFFLPLLETG 126 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 +T I TTENPSF + LLSR V L+SL ++ V + ME +P Sbjct: 127 ELTLIATTTENPSFSVTRQLLSRLHVLRLRSLGMAELVDVGKRGMEKLDSL-------IP 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 +++ +A L GDAR LN +E A + ++ L+P+ L E R D +GD Sbjct: 180 EKSLELLATLSGGDARTMLNLVEFAAGL------EEKDLEPDQLKTRLPEIVLRGDREGD 233 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 Y+L SAL KS+RGS PDAALY+ A ++ G DP ++ RR + A+EDVG DP A+ + Sbjct: 234 SHYELASALIKSIRGSDPDAALYYLASLVETGEDPRFICRRLILSAAEDVGLGDPMALPL 293 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A++ R+G EG +A+ VYLA APKSN+ Y + +A+ + R VP+HLR Sbjct: 294 AVSCEQAVERIGMPEGWIPMAETTVYLALAPKSNSAYAGYLSAIKEIRTNGPKPVPLHLR 353 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 NA T L KE GYGQ Y+Y H A+ + Y PPE+ +Y +G E ++ Sbjct: 354 NASTSLQKEWGYGQGYKYPHAYPEAWV-EQDYLPPELKGRVFYQAKTQGHEERLALWTRK 412 Query: 434 LAEQDQNSPIKRYR 447 L Q K + Sbjct: 413 LKASRQRPKGKETK 426 >UniRef50_UPI00016B2545 recombination factor protein RarA n=3 Tax=candidate division TM7 RepID=UPI00016B2545 Length = 400 Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 167/404 (41%), Positives = 238/404 (58%), Gaps = 15/404 (3%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVI 70 PLA MRP+ + IGQ+HLL+ GK L + I+ S+ILWGPPG+GKTTLA +I Sbjct: 1 MNKTPLAELMRPQKIKDIIGQRHLLSEGKILYKIIKQKEPVSLILWGPPGSGKTTLARII 60 Query: 71 ARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI 130 A+ A+ +SAVTSG KEI IE ARQN N RT+LFVDE+HRF+K QQDAFLPHI Sbjct: 61 AKETEANFMELSAVTSGKKEINNIIEIARQNWNLQLRTVLFVDEIHRFSKVQQDAFLPHI 120 Query: 131 EDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDI 190 E G IT IGATTENPSFE+ + LLSR +V LK L +DI+Q+LT+A+E + Sbjct: 121 ESGLITLIGATTENPSFEIITPLLSRVKVMTLKPLEDKDIQQILTKAIEKLAKSK----- 175 Query: 191 VLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDN 250 ++ +E+ +A + +GDAR AL LE++ + + + P+ + + +D Sbjct: 176 LVTNESIEYLAHISSGDARVALGNLELVLGINKGK------ITPDTINIALQKIPPTYDK 229 Query: 251 KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRA 310 G+ YD ISA KS+RGS +A LY+ AR+I AG DP ++ARR + ASED+G A Sbjct: 230 NGNYHYDTISAFIKSMRGSDVEATLYYLARMINAGEDPKFIARRMIIFASEDIGLVGNGA 289 Query: 311 MQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPV 370 + +A+A + RVG E + LA + KS V A + ++ P+ +P+ Sbjct: 290 LSLAVATFQAVERVGLPEASYNLFHCATALARSNKSREVTNLMHNAQSLVKKFPNIQIPL 349 Query: 371 HLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTR 414 HLRN+ + + K++GYG+ Y+ + + + P EI Sbjct: 350 HLRNSTSAITKDLGYGKNYK----WKAGFKHEKGFLPKEILDYN 389 >UniRef50_UPI00015B415D PREDICTED: similar to werner helicase interacting protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B415D Length = 522 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 163/437 (37%), Positives = 234/437 (53%), Gaps = 38/437 (8%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 S S D PLA +MRP ++ Y+GQ+H+L L + + + ++ILWGPPG Sbjct: 97 STRSKDTKPKDSIPLAEKMRPNSIMSYVGQKHVLGPETMLYQLLSKTEIPNIILWGPPGC 156 Query: 62 GKTTLAEVIARYA------NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEV 115 GKT+LA VIA ++SA SG+ ++++AI A GRRT++F+DE+ Sbjct: 157 GKTSLANVIANTCQHCPGGKYRYVKLSAAMSGISDVKDAITIASNELKFGRRTVMFMDEI 216 Query: 116 HRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLT 175 HRFNK+QQD FLPHIE GTI IGATTENPSF LN+ALLSR RV +L+ L+ E++ ++L Sbjct: 217 HRFNKTQQDTFLPHIESGTIILIGATTENPSFSLNAALLSRCRVIVLEKLTIENLTEILI 276 Query: 176 QAM----------EDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA-----D 220 +A+ E + ET + +AE +GDAR AL LE+ Sbjct: 277 RAIKAAGGAVHDFEKPPNASINNKFFIDRETVKWLAETSDGDARIALGGLELAIHSKVPS 336 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 SG + + + + + +D KGD+ YD+ISALHKSVR S +AALYW R Sbjct: 337 SEGSSSSGLNFISLDDVKDSLKKTHMLYDKKGDQHYDMISALHKSVRASDDNAALYWITR 396 Query: 281 IITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 ++ G DP+Y+ RR + +A+ED+G DP+A+ VA+ +G E + +AQ +YL Sbjct: 397 MMAGGEDPVYIGRRLVRMATEDIGLEDPKALGVAVHTMQSCKMLGMPECDVLLAQCAIYL 456 Query: 341 ACAPKSNAVYTAFKAALADARERPD--YDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA 398 A APKS + + +AA D VP+HLRN PT ++ + Sbjct: 457 ARAPKSRLMEDSLRAAQRVVANYKDAQLPVPLHLRNIPTSILGKKDRSAL---------- 506 Query: 399 YAAGEVYFPPEIAQTRY 415 Y P EI + Sbjct: 507 -----PYMPEEIKNLDF 518 >UniRef50_C5NXY2 Replication-associated recombination protein A n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXY2_9BACL Length = 415 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 136/427 (31%), Positives = 220/427 (51%), Gaps = 13/427 (3%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + L ++RP + IGQ HL+ GK L + +E+ + S IL+GPPGTGKT++A +A Sbjct: 1 METLINKLRPSKIDDIIGQHHLIGDGKVLTKIVESKKMFSFILYGPPGTGKTSIANALAN 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + + ++AV K++ IE ++ ++ IL +DE HR K QD LP IE Sbjct: 61 ELDYKFKILNAVNCTKKDLTAVIEESK----RFKKVILLLDEFHRLTKPMQDILLPEIEF 116 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 I IG TT NP +N A+ SR ++ L+ +S +DI + L + +K +D+ + Sbjct: 117 DNIYVIGCTTNNPYHTVNPAIRSRLIIFELQQVSNDDIYEYLKKISNNKEI--FPKDLKI 174 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ + IA +GD R +LNT E++ +++ ++ + L ++ + +D G Sbjct: 175 EDDVFKTIALNSSGDLRFSLNTFEILYNLSNEG----EIITKDKLLNLSLGKFKAYDKDG 230 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D FYD+ISA KS+RGS DA+LY+ A +I +G D + RR IA ED+G A+P Sbjct: 231 DAFYDIISAFQKSIRGSDVDASLYYLALLIDSG-DLDTIYRRMSVIAYEDIGLANPNIGP 289 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 AA + +G E +A A++ LA + KSN+ Y A AL + + P + +P HL Sbjct: 290 FVHAAIESAKMLGLPEARIPLANAVIQLALSLKSNSAYMAIDNALHETKTNPKFIIPDHL 349 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFP-TNRGLEGKIGEKL 431 R+A ++ G Y+Y H Y + Y P + +Y P TN E + + Sbjct: 350 RDAHYYGADKLNRGVGYQYPHSHPTGYIKQQ-YLPDNLVGRTFYTPKTNNKNEQNLAQYK 408 Query: 432 AWLAEQD 438 ++ Sbjct: 409 KFIDNMK 415 >UniRef50_A4EPD3 ATPase n=3 Tax=Rhodobacteraceae RepID=A4EPD3_9RHOB Length = 437 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 165/445 (37%), Positives = 243/445 (54%), Gaps = 13/445 (2%) Query: 1 MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPG 60 MS+L + QPLAA +RP +L + +GQ+ L A G L R I A L S++L+GPPG Sbjct: 1 MSDLFDVGREQENQPLAAALRPRSLDEVVGQKTLTAKGSVLRRRIAANQLGSIVLYGPPG 60 Query: 61 TGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNK 120 GKT++A + N + +++ A +GVK+IR+ + AR ++FVDEVHRF+ Sbjct: 61 VGKTSIARAVGEMLNKEFKQLHATRAGVKDIRQLADEARIRPI-----LIFVDEVHRFSA 115 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 +Q D L E+GT FIGATT+NP L AL+SR+ + L+ ++ ED+E VL + +E Sbjct: 116 TQADDLLSICEEGTADFIGATTQNPYTALPKALVSRSTILKLEPIAIEDMEAVLARGLEH 175 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 G ++VL E R IA GDAR AL TLE +A DSG + ++L E+ Sbjct: 176 LAEM--GIEVVLAPEQLRIIAGRSGGDARSALTTLESLAI--GHGDSGSVKVTDDMLEEV 231 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 D GD+ YD+ISA KS+RG P+A LYW AR+I G DP ++ARR + AS Sbjct: 232 YRAAPVNHDRSGDQHYDIISAFIKSMRGGDPEAVLYWLARLIHGGEDPRFIARRIMIQAS 291 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 EDVG AD A+Q A+AA +G E +A A +++ APKS + AAL+ Sbjct: 292 EDVGLADNTALQTAVAAAQAVEMIGYPEARIILAHAALHVTRAPKSGSANHGISAALSAV 351 Query: 361 RERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTN 420 P VP+HLR+A + +++G+G YR H++ + + Y P + R+Y Sbjct: 352 GSEPPLPVPLHLRDAHYQGAEQLGHG-GYRSPHNDPRGWV-DQTYAP-GMQPGRFYQSEA 408 Query: 421 RGLEGKIGEKLAWLAEQDQNSPIKR 445 R ++ E+ P+ + Sbjct: 409 REA-ATFEKRADEYWERVTGRPVPK 432 >UniRef50_A6LJD0 AAA ATPase, central domain protein n=3 Tax=Thermotogaceae RepID=A6LJD0_THEM4 Length = 410 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 151/429 (35%), Positives = 237/429 (55%), Gaps = 23/429 (5%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 L+ +RP+ ++IGQ+HL + AIE+G+L S + +GPPG GKT+ E+I + + Sbjct: 4 LSEILRPKGFEEFIGQEHLFGEKGLIRLAIESGNLFSAVFYGPPGCGKTSTLEIIRKKTD 63 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 ++ +A + ++++ ++ A++ + ++ ++FVDE+HRFNK QQD FLP IE G Sbjct: 64 FEIYHFNAAVTSTIDVKKVLDYAQKVKGL-KKMLIFVDEIHRFNKKQQDIFLPGIERGDY 122 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 FIGATTENP +N ALLSR +V K L +I+++L +A+ ++I + + Sbjct: 123 IFIGATTENPFKMINPALLSRIKVIAFKKLKVFEIKKLLERAI-------SVKNIDVMES 175 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 I + +GDAR A+N ++++DMA+ GK ++ E++T GE + +K Sbjct: 176 VMDFITRISDGDARFAINIYDVLSDMAKA--LGKEIVDDEIVTLYGGEVKMVYTSK--EH 231 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 Y+L SA KS+RGS PDAALY+ AR++ G DP ++ARR +ASEDVG ADP A+ +AI Sbjct: 232 YELASAFIKSIRGSDPDAALYYMARMLEVGEDPRFIARRLAILASEDVGLADPMAILIAI 291 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 A VG E +++ ++YL+ APKSN+ A A+ ARE + VP +L N Sbjct: 292 ATAQAVELVGLPECVLNLSECVIYLSLAPKSNSSTLAISKAIESARETMNLSVPFNLLNV 351 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 Y+ H + Y P I+ +Y P G E ++ E L L Sbjct: 352 KDS---------GYKNPHHYGG--FLKKSYLPKGISDKVFYIPKEIGKEKRLKEILEKLW 400 Query: 436 EQDQNSPIK 444 E + K Sbjct: 401 EGVKEYGNK 409 >UniRef50_C6HUJ9 AAA ATPase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUJ9_9BACT Length = 451 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 210/431 (48%), Gaps = 7/431 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PL RMRP +L +GQ+ LL R I G SM+L+GPPGTGK+ E++ R Sbjct: 14 PLPYRMRPSSLEDLVGQEALLGPQGLFRRFIAEGRWPSMVLFGPPGTGKSGFVELLPRLL 73 Query: 75 -NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + ++A T+GV ++R + R + R G + ++ +DE+H ++KSQQ+ L +E G Sbjct: 74 SDHTFAHLNATTAGVADLRPELARGERRRREGGQHVVVLDEIHTWSKSQQEVLLSGVETG 133 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I +G + P L L SR ++ + L + +L + + R G + L Sbjct: 134 QIILLGLSNTTPYAALIPPLASRLLLFPFQPLDENALSTLLDRGLHRLARETHGPPLQLD 193 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 R + GD RR L LE MA + + E + I + D Sbjct: 194 PAARSLLVRYSGGDGRRLLLALESAVLMASGRGGEEFRVGEEDVLAILSRAGQVY-GDKD 252 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 YD ISA KSVR PDAAL+W AR+I G DPLY+ARR + +A+EDVG ADP+A+ Sbjct: 253 SHYDTISAFIKSVRNYDPDAALHWLARMIEGGEDPLYIARRLVILAAEDVGLADPQALTQ 312 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 A++ + VG EG +A V+LA +PKS + Y A ALAD R VP+HLR Sbjct: 313 AVSCFHAVREVGLPEGRIPLAMTTVFLALSPKSISAYQAIDRALADVRGGFVPPVPLHLR 372 Query: 374 NAPTKLM---KEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEK 430 + +K E +Y Y D+ + + + P RYY P +RG E ++ E+ Sbjct: 373 DRTSKRAFSRDEATTPLDYLYPPDQPGG-VSPQSHLPEG-ESRRYYLPNDRGRERELKER 430 Query: 431 LAWLAEQDQNS 441 + Sbjct: 431 YEAARRLREGR 441 >UniRef50_UPI0001C3744E recombination factor protein RarA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3744E Length = 423 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 148/411 (36%), Positives = 230/411 (55%), Gaps = 5/411 (1%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 PLA ++RP+ LA +GQ+H+LA GKPL R I++G + +MI +GP G GKTT+A +IA Sbjct: 4 PLADKIRPKTLADVVGQEHILADGKPLRRIIDSGTVPNMIFYGPSGVGKTTVARIIAENC 63 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + +++ + + +I++ + + +L++DE+ NK QQ + L +IE+G Sbjct: 64 GMSLYKLNGTNASISDIKDVVADIG-TFGSENGILLYLDEIQYLNKKQQQSLLEYIENGD 122 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 IT I +TTENP F + +A++SR+ V+ K +S E + + +A G + D Sbjct: 123 ITLIASTTENPYFSVYNAVISRSTVFEFKPVSAEQLMPAIRRA-FRIMSEENGYAVEASD 181 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 + + IA GD R+A+NT E+ + GK + + L +A + R+D GD+ Sbjct: 182 DIIKQIAYSCGGDVRKAMNTAELAV-VCGEASDGKVAVTADSLKILAQRSNMRYDRDGDQ 240 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 YD++SAL KS+RGS +AAL++ AR+I AG D + ++RR L IA+ED+G A P+A+ + Sbjct: 241 HYDILSALQKSIRGSDENAALHYAARLIEAG-DIISLSRRLLVIAAEDIGLAYPQAIAIT 299 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 A D ++G E +A+AI+ LA APKSN+ A AA+AD R D P HL+N Sbjct: 300 KACVDSALQLGLPEARIPLAEAIILLATAPKSNSAEAAIDAAIADLRSCDALDFPRHLQN 359 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEG 425 GQ Y+Y HD N Y + Y P +A YY + E Sbjct: 360 KHFDGKGAAVVGQHYKYPHDYKNHYVKQQ-YLPDALAGHVYYSYGDNKQEQ 409 >UniRef50_D1B930 AAA ATPase central domain protein n=2 Tax=Synergistaceae RepID=D1B930_THEAS Length = 421 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 176/423 (41%), Positives = 240/423 (56%), Gaps = 17/423 (4%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTT 65 ++ + PL RMRP +L +Y+GQ+HLL G PL I + L S IL+GPPG GKTT Sbjct: 1 MEDRPSLMTPLPERMRPRSLDEYVGQEHLLGEGGPLRLLISSNSLRSCILYGPPGVGKTT 60 Query: 66 LAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAG-RRTILFVDEVHRFNKSQQD 124 L ++A ++ I+AVTS + ++R +RA + G I FVDE++ FN QQ+ Sbjct: 61 LVRLMATTTGRELLEINAVTSKLSDLRALADRAASLTSMGFEPPIAFVDEIYHFNSQQQN 120 Query: 125 AFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRG 184 LP +E G + +G TTENP FE+N LLSR VY LK L + QVL +A+ED RG Sbjct: 121 VLLPFVESGQMVLVGTTTENPWFEVNKTLLSRMLVYELKPLEDRHVIQVLVRALEDFDRG 180 Query: 185 YGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGER 244 G + + D+ A+A GD R+AL LE +A SG RV+ E + AG Sbjct: 181 LGRLGLSVTDDALAALAASSQGDLRQALVRLETVASAVAA--SGGRVMGEEQVAAFAGRA 238 Query: 245 SARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVG 304 R+D K D+ Y +ISA KSVRGS PDAA+YW AR++ +G DP ++ARR +A+E+VG Sbjct: 239 FKRYDRKADQHYGVISAFIKSVRGSDPDAAVYWLARMLESGEDPRFIARRICILAAEEVG 298 Query: 305 NADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERP 364 ADP A+ VA AA F RVG EG+ +A+A +Y+A APKSN VY A + A + Sbjct: 299 LADPMALVVAQAAASAFDRVGLPEGDMILAEAALYIAAAPKSNRVYRAIRDAREAVAKGD 358 Query: 365 DYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLE 424 +VP HL + YRY HD + + Y P R+Y P++RG E Sbjct: 359 VLEVPEHL----------LPGSPNYRYPHDSPSGWVPS-SYLPE---PRRFYRPSDRGGE 404 Query: 425 GKI 427 KI Sbjct: 405 LKI 407 >UniRef50_D1B0W0 AAA ATPase central domain protein n=5 Tax=Campylobacterales RepID=D1B0W0_SULD5 Length = 396 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 127/419 (30%), Positives = 210/419 (50%), Gaps = 31/419 (7%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 RP+ + + GQ+HL P + +++G + + +GP G GKTTLA ++A Sbjct: 9 FRPKVIEELSGQKHLSGENSPFRKLLKSGSMSHALFFGPAGVGKTTLARIVANTLQLPFY 68 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 + A + V+EIR+ + + +R A ++ ++F+DE+HR +K+QQ+ L +E+ IG Sbjct: 69 ELDATSIKVEEIRKILSQ---HRGALQKPLIFIDEIHRLSKTQQEVLLLPMENHEAIVIG 125 Query: 140 ATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRA 199 A+TENP F L+S + SR ++ L +D+E +L + E + +E R Sbjct: 126 ASTENPYFVLSSGIRSRMMLFEFYPLEMKDMEAILERVHEKIE-------FQIDEEAREY 178 Query: 200 IAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLI 259 + GD+R LN LE + + + L + + + Y+LI Sbjct: 179 LIRSSAGDSRSFLNLLEFALKV-------DLHVNMQTLKALRPSALKDGVSSDNTHYNLI 231 Query: 260 SALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 SA+ KSVRGS DAALY+ AR+I G P ++ARR + +ASED+GNA+P A+ +A + Sbjct: 232 SAMIKSVRGSDVDAALYYLARLIDGGESPDFIARRLVILASEDIGNANPNALNLASSTLM 291 Query: 320 CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKL 379 +++G E ++Q ++YLAC+PKSN+ Y A ALA + +VP HL++ K Sbjct: 292 SVSKIGYPEARIILSQCLIYLACSPKSNSAYNAINQALAYVKNEKVLNVPEHLQSPSPK- 350 Query: 380 MKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQD 438 Y Y HD + + Y + +Y G E + E L + + Sbjct: 351 --------GYLYPHDF-GGWV-EQDYLEKPL---HFYDNLPIGFERTMAEWLVKIKIKK 396 >UniRef50_A7ZAZ1 ATPase, AAA family protein n=45 Tax=Epsilonproteobacteria RepID=A7ZAZ1_CAMC1 Length = 394 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 124/425 (29%), Positives = 199/425 (46%), Gaps = 32/425 (7%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 LA RP+NL + GQ+ + + I + I +GP G GKT+ A +A Sbjct: 1 MSSLALMFRPKNLDEICGQKAV---KTAFLKFIATSKIPHSIFYGPAGCGKTSFARAVAS 57 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 AN D + + R+ ++ N + + F+DE+HR +K+QQ+A L +E+ Sbjct: 58 GANYDFYEFDGGNLKIDDFRKILKNYENALN---KPLFFIDEIHRLSKTQQEALLIPMEN 114 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 IGA+TENP F L+S + SR+ ++ + LS+ D E++L + E + + Sbjct: 115 YKALVIGASTENPFFTLSSGIRSRSMLFEFRPLSSSDFEELLAKIKEQIS-------FSI 167 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 ++ + + + GDAR LN LE + + E L + + Sbjct: 168 DEDAKEYLFKSSGGDARAMLNLLEFAVTL-------DENVSIENLKTLRQNALKEGAKED 220 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D Y+L SA KS+RGS +A +Y+ AR+I +G ++ARR ASED+GNA+P A+ Sbjct: 221 DTHYELASAFIKSLRGSDENAVIYYLARLIDSGESADFIARRMAIFASEDIGNANPNALN 280 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +A + +G E +AQ VYLA +PKSN+ Y A AAL + +P +L Sbjct: 281 LAASTLSVVKEIGFPEARIILAQCAVYLASSPKSNSSYNAINAALRYVQTEEILKIPPYL 340 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 +N TK K +Y Y HD + + Y + +Y G E + E L Sbjct: 341 KN-HTKESK------DYLYPHDF-GGWV-EQKYLEKPLV---FYKSKGIGFEKTLNEWLE 388 Query: 433 WLAEQ 437 + + Sbjct: 389 KIRSK 393 >UniRef50_UPI0000DB7733 PREDICTED: similar to Werner helicase interacting protein isoform 1 n=2 Tax=Apocrita RepID=UPI0000DB7733 Length = 433 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 143/422 (33%), Positives = 220/422 (52%), Gaps = 26/422 (6%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA +MRP YIGQ+ ++ + L + + GH+ SMI WGPPG GKT+L +I++ + Sbjct: 15 LAEKMRPACFHDYIGQEKVVGSNTILQQLLTKGHIPSMIFWGPPGCGKTSLTNIISKISK 74 Query: 76 ------ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPH 129 ++ +SA +SGV I+ I + + + + I+ +D++HRFNK QQD FLPH Sbjct: 75 EMHGEKVNIINLSATSSGVSNIKNIINKTKTE-SKFNQIIVIMDKIHRFNKLQQDIFLPH 133 Query: 130 IEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKT------- 182 +E GT T IG TTENPS+ LNSALLSR R++ L L+ +I ++L +A+ Sbjct: 134 VETGTFTLIGTTTENPSYSLNSALLSRCRIFALNKLTMLNIVEILCKAISSINGEIYNFS 193 Query: 183 -RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM--AEVDDSGKRVLKPELLTE 239 + + + +AE+ +GDAR ALN LE+ + + +S + E + E Sbjct: 194 LKNFSKPHFFINKTAIDWLAEVCDGDARVALNDLELAIKIKISNKLNSNFVSITLEDVKE 253 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + D + + L SALHKS++ +A+LYW ARI+ DP+ +ARR + I+ Sbjct: 254 SVKQTHMLSDKQSNNIQHLYSALHKSIKAGKENASLYWLARIMDIKEDPVDIARRLIRIS 313 Query: 300 SEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALAD 359 SEDVG AD A+ +AI +G E + + Q +VYL APKS VY A K Sbjct: 314 SEDVGLADLDALGIAIHTLHGCEMIGMPECDVILTQCVVYLTRAPKSQLVYNALKRVENI 373 Query: 360 A--RERPDYDVPVHLRNAPT--KLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRY 415 + P VP+H+R+ K+ G+ +E +E E Y P + + Sbjct: 374 IINHKGPQPVVPLHIRDRSGQEKIHTTFGFHKENVLTKEEN-----VENYLPLGLLHANF 428 Query: 416 YF 417 + Sbjct: 429 FS 430 >UniRef50_A9BGH8 AAA ATPase central domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGH8_PETMO Length = 411 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 145/429 (33%), Positives = 231/429 (53%), Gaps = 25/429 (5%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPL +RP+ + + +G + L + L I+ + S I++G PG+GK+T+ + Sbjct: 5 QPLYEIIRPKKVDEVLGNEKL---KEILKTWIKNKKVRSFIIYGEPGSGKSTIVRALINE 61 Query: 74 AN--ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 DV IS G K+I++ IE+ + +LFVDE+HR NK++QD L +E Sbjct: 62 IKDYYDVFSISGAIEGKKKIKDIIEQKNNLFT--KPKLLFVDEIHRLNKAEQDTLLLSVE 119 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 G +T IGATTENP+ +N ALLSR V+ K L T+D E++ Q + D+ Sbjct: 120 TGELTLIGATTENPAISVNPALLSRVLVFKTKELITDDYEKLFQQIEDYYK------DLK 173 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + E R+A+ E D RR +N +E +++G + E L + G R +D Sbjct: 174 ITKEARKALIEYAGNDIRRIMNLIETA------NEAGINSIDLEFLKDFTGYR-LTYDKN 226 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 Y ISA KS+RGS DAAL + A ++ +G DP+Y+ARR + +++EDVG ADP A+ Sbjct: 227 AK--YSFISAYIKSMRGSDVDAALLYLAYMLESGEDPMYIARRMVILSAEDVGLADPNAL 284 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 +A++A VG E +++A +YL +PKSN+ Y A+ A + ++++P Sbjct: 285 NIAVSAMIATEHVGYPECYLPLSEATMYLCSSPKSNSAYLAYAKAKEFI-SQNNFEIPPK 343 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 L N K M++ G+G+ Y+Y HD + E Y P T+++ P G+E +I E+L Sbjct: 344 LINPLNKRMEKQGFGEGYKYPHDY-GGFVR-ESYMPEGFESTQFFTPKEIGIEKRIKERL 401 Query: 432 AWLAEQDQN 440 L + +N Sbjct: 402 KDLWKDKKN 410 >UniRef50_UPI0000E4A039 PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A039 Length = 672 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 156/439 (35%), Positives = 222/439 (50%), Gaps = 72/439 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 F+PLA RMRP + IGQ L A L R ++ G++ SMI WGPPG GKT+LA VIAR Sbjct: 269 FRPLAERMRPYTMDTLIGQNKALGATGTLRRLLDVGNIPSMIFWGPPGCGKTSLANVIAR 328 Query: 73 YAN----ADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNKSQQDAFL 127 A SA TS V +++ A+E AR + RR ILF+DE+HRFNK+QQD FL Sbjct: 329 QAKVRNTHRFITFSATTSNVSDVKSAVEIARNEQRMYRRKTILFIDEIHRFNKTQQDTFL 388 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 H+E+GTI IGATTENPSF +NSALLSR RV +L+ LS E I +L +A+++ G Sbjct: 389 LHVENGTIILIGATTENPSFRVNSALLSRCRVVVLEKLSPESIMLILERALKEGQVGIEN 448 Query: 188 QD----------IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKR------- 230 + I + E +A L +GDAR ALN+L+M+ D+A+ G++ Sbjct: 449 AEHLHKTCWSTTISIEREALCLLANLCDGDARSALNSLQMVLDVAKGSTGGQQADASKVL 508 Query: 231 ---VLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGD 287 V+ + + + +D G+ Y+ SAL KS+R S +AA+YW R++ G D Sbjct: 509 RSSVITIDQIRDSLQRSHISYDKSGEEHYNCASALQKSIRASDANAAVYWLGRMLVGGED 568 Query: 288 PLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSN 347 PLY+ARR + ASED +A +YL+ APKS Sbjct: 569 PLYIARRLVVCASED----------------------------LNLAHCAIYLSRAPKSR 600 Query: 348 AVYTAFKAALADAR--ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAG--- 402 V T + + + P +P+HL+ TK Y+ + + G Sbjct: 601 QVATVYARVKDCLKNHQGPTPPIPLHLQTPATK----------YQLVRNTLGGWGKGRVM 650 Query: 403 ----EVYFPPEIAQTRYYF 417 E + P +A ++ Sbjct: 651 AGGYEGHMPESLAGLDFFS 669 >UniRef50_C7H148 ATPase, AAA family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H148_9FIRM Length = 411 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 148/429 (34%), Positives = 228/429 (53%), Gaps = 28/429 (6%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 P + +RPE L +IGQ+H L + AI+ G S + +GP GTGKTTLA +IA+ Sbjct: 1 MVPFSTYVRPERLEDFIGQEHFLKKNALVYNAIKEGRFESAVFYGPSGTGKTTLARIIAK 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNR--NAGRRTILFVDEVHRFNKSQQDAFLPHI 130 + +I+A G+ E+++ + A+ + T L+VDE+HR+NKSQQD+ L + Sbjct: 61 MQDDSFIQINAADVGISELKKILAEAKDRFYGIISKSTYLYVDEIHRWNKSQQDSLLSAL 120 Query: 131 EDGTITFIGATTENPSFELNSALLSRAR-VYLLKSLSTEDIEQVLTQAMEDKTRGYGGQD 189 E+G I I +TTENP FE+N+ +LSR R +Y K L+ +DI ++L + ++ G+ Sbjct: 121 EEGYIKVIASTTENPFFEINNQILSRIRNIYEFKPLANDDIVKLLKRGVD--IFAGDGRV 178 Query: 190 IVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFD 249 I ++ IAE NGDAR AL+TL G+ + E + EI +R Sbjct: 179 IDYDEDALMLIAEKSNGDARIALDTL----GFILNSLKGEDRITEEKVYEITYDRQYMKF 234 Query: 250 NKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPR 309 NK D Y++ SALHKS+RGS PDAA+++ AR++ G D + RR L ASEDVG A P+ Sbjct: 235 NKLDDKYNVFSALHKSMRGSDPDAAVHYLARLLQGGEDVKVIGRRLLVAASEDVGLAYPQ 294 Query: 310 AMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 A+ + + + +G E ++QA+V ++ APKS + Y A +A+ + + DVP Sbjct: 295 AIGIVRSCVEAAHMLGMPEARIPLSQAVVLISLAPKSRSTYNAINSAIEEIKTGRIDDVP 354 Query: 370 VHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEI--AQTRYYFPTNRGLEGKI 427 H+RN H+ +A + + P + RYY P++ GLE I Sbjct: 355 DHIRN-----------------FHNNNDANRPADQFLPDNLYKKGVRYYVPSDNGLEKDI 397 Query: 428 GEKLAWLAE 436 + Sbjct: 398 YSAYLKFKK 406 >UniRef50_A0RRQ8 ATPase, AAA family n=3 Tax=Campylobacter RepID=A0RRQ8_CAMFF Length = 397 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 125/421 (29%), Positives = 206/421 (48%), Gaps = 32/421 (7%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 L+ RP N+ +GQ+ ++ + + I++ + + +G G GKTT+A++IA+ N Sbjct: 3 LSNDFRPNNINDMVGQKDIV---ELFSKFIKSKKIPHSLFFGATGCGKTTMAKIIAKQMN 59 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + + ++IR+ I + + ++F+DE HR +K+QQ+ L +E G Sbjct: 60 YEFFELDGANLKSEDIRKIISKFE---TTLYKPLIFIDEFHRLSKTQQETLLIPMEKGKC 116 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 +GATTENP F ++S + SR ++ K LS +++ +LT+ + +E Sbjct: 117 IVMGATTENPKFVVSSGIRSRMMIFEFKPLSHDELTILLTKV-------QNVIKFEITNE 169 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 + + GDAR LN LE + + +L + R + + D Sbjct: 170 AKDYLINSSGGDARSLLNLLEFALS-------ADKSIGLNILKTLRSHRVSEGVSNSDTH 222 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 Y+L SAL KS+RGS DA++Y+ AR+I G +P ++ARR + ASED+GNA+P A+ +A Sbjct: 223 YELTSALIKSLRGSDIDASIYYLARLIQGGEEPAFLARRMVIFASEDIGNANPNALNLAT 282 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 +++G E +AQ VYLA +PKSN+ Y A A+ RP VP +L N Sbjct: 283 NVMLAVSKIGYPEARIILAQCAVYLASSPKSNSSYKAINDAIEFVENRPALPVPKYLIN- 341 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 T K EY Y HD + + Y ++ +Y G E + E + L Sbjct: 342 -TDKAKS-----EYLYPHDF-GGWV-EQKYMSTQVK---FYKSNAIGFEKTLDEWITKLK 390 Query: 436 E 436 E Sbjct: 391 E 391 >UniRef50_B3PM47 ATPase, related to the helicase subunit of the Holliday junction resolvase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM47_MYCA5 Length = 402 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 135/422 (31%), Positives = 212/422 (50%), Gaps = 24/422 (5%) Query: 16 LAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYAN 75 LA + RP L ++ + + I S I +G PGTGKTT++ ++A Sbjct: 5 LAQKTRPIALDDFVCND---SQRFLFEKIIANDDFRSFIFYGKPGTGKTTISYILASSLK 61 Query: 76 ADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTI 135 + +A ++ + + + N IL +DE+HR NK +QD LP+IE+ I Sbjct: 62 VSFDYFNAAIEKKED---LVAKLKLN------KILIIDEIHRLNKDKQDILLPYIENDLI 112 Query: 136 TFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDE 195 T TTENP F++N AL SR + +K+ S +D+ + L + + L DE Sbjct: 113 TIYATTTENPYFKVNPALRSRCAIVEIKNPSIDDLSKQLKKIALNNQLDSN-----LSDE 167 Query: 196 TRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRF 255 IA NGD R A+N+L++++ +++ + L + + +I D+ GD Sbjct: 168 IYHFIASQSNGDYRSAINSLDLISTLSK-----TKKLTLDEIKKILPAIQFTGDSNGDAH 222 Query: 256 YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAI 315 +D +SA HKS+RGS P+AALY+ ++ +G D + RR + A EDVG A+P + Sbjct: 223 FDHLSAFHKSLRGSDPNAALYYGFILVESG-DFDGLFRRMICAAYEDVGLANPNLPVQVM 281 Query: 316 AAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNA 375 A D F R+G EG IA AI+ +A +PKSN+ Y A+ + L D R ++VP HL+++ Sbjct: 282 NAIDAFERLGLPEGYLPIANAILEIALSPKSNSAYLAYHSVLEDLRSGQLFEVPNHLKDS 341 Query: 376 PTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 K++ G EY Y H+ Y + Y P E+ +YY G E KI E L Sbjct: 342 SYSSAKKLKRGVEYLYPHNFDRHYVKQD-YLPSELKNKQYYCSQKEGFEEKINEYWRKLK 400 Query: 436 EQ 437 + Sbjct: 401 GE 402 >UniRef50_Q2NJI8 ATPase, AAA family n=7 Tax=Mollicutes RepID=Q2NJI8_AYWBP Length = 414 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 123/427 (28%), Positives = 218/427 (51%), Gaps = 18/427 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLA-AGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA +RP + IGQ HL+ + R ++ + S+I +G PG GK++LA+V+A Sbjct: 4 KPLAFALRPSTITDIIGQSHLINDQNGIISRMLKNNYASSLIFYGVPGIGKSSLAQVLAN 63 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + +A ++ + I++A ++ IL ++E+HR NK +QD L ++E+ Sbjct: 64 DLQIKYDIFNAAIDKKSKLEKIIQQALN----FKKFILIIEEIHRMNKDRQDILLQYLEN 119 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G + TTENP F +N ++ SR + L+ ++TE++ L + + +K + Sbjct: 120 GHLIMFACTTENPYFVINPSIRSRVNIIKLERITTEEMLTGLNKLIVNKKLPLN-----I 174 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 + I +L +GD R A+N LE+ + ++ + +++ +I+ + Sbjct: 175 LQDALLLICQLSSGDLRIAINMLELCLHLYPGEE-----ITKKIIKKISSSANLINFKDN 229 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 D ++L SAL KS+RGS DAAL+++AR++ +G D + RR L A ED+G A+P + Sbjct: 230 DEHHNLKSALQKSIRGSDVDAALHYFARLLASG-DHEALIRRMLITAYEDIGLANPMIII 288 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 A D F ++G EG + AI+ + + KSN+ Y A A D + +++P HL Sbjct: 289 HVKTAIDAFRQIGLPEGRIPLGLAIIEMCLSEKSNSAYLASNKAYEDVLQGNVFNIPKHL 348 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPT-NRGLEGKIGEKL 431 ++ ++G G +Y+Y H+ N Y + Y P EI + YY P + E KI + Sbjct: 349 QDTSYNSASKLGIGFDYKYPHNFPNNYVNQQ-YLPQEIKELIYYIPKLHSEYEKKINKIH 407 Query: 432 AWLAEQD 438 + Sbjct: 408 EKFKQNI 414 >UniRef50_A3ERK9 Probable ATPase, AAA family n=2 Tax=Leptospirillum sp. Group II RepID=A3ERK9_9BACT Length = 444 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 123/450 (27%), Positives = 216/450 (48%), Gaps = 15/450 (3%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGK 63 + F + +PL++ + P+ +++GQ HL+ L R I SM++ GPPG GK Sbjct: 1 MKSLFEPASQKPLSSLLFPDRPEEFLGQPHLMGERGILRRLIAVRSFRSMVIHGPPGCGK 60 Query: 64 TTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ 123 + ++ + E + A S E+++AI+R R +G+ +L ++E+ RF ++QQ Sbjct: 61 SAFVHLLQKVLPFHFEVVRAGESSGGELKKAIDRGVSYRQSGQDCLLVIEEIDRFTRTQQ 120 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D +P +E G + +G + +NP L L SR ++ + LS ED+ +L + Sbjct: 121 DVLVPALERGDLLLLGLSFDNPLRALLPPLASRLLLFSFQPLSPEDLLTLLERG-RQFLE 179 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLE-MMADMAEVDDSGKRVLKPELLTEI-A 241 + + E + GD R+ L E ++ + + + + + + A Sbjct: 180 KRDRSPVSISPEAASVLVRRSGGDGRKLLLLFEALVISRKDHGERREVQIGLPEVHGMEA 239 Query: 242 GERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 G +D ++ YDLISA KS+R PD+A+++ AR+I +G DP++++RR + +ASE Sbjct: 240 GSGGIFYDR--EQHYDLISAFIKSIRNHDPDSAIHYLARMIESGEDPVFISRRLVILASE 297 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 DVG A+P A+ VA++ + +G EG +A+ +YLA +PKSN+ Y A A+ + R Sbjct: 298 DVGLANPHALTVAVSCLEAVRSIGMPEGRIVLAETSLYLALSPKSNSAYRAIDRAIREVR 357 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQE----YRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 E VP RN + + G + Y Y + N + + P Y Sbjct: 358 EGFLPPVPFFFRNVSPSSVIQSGAFPDKRDPYLYPPEMPNG-VSPQSGLPE---GHTVYS 413 Query: 418 PTNR--GLEGKIGEKLAWLAEQDQNSPIKR 445 P R G E ++ ++L Q N Sbjct: 414 PPERLVGEESEMVKRLERWRRQKGNPEEDE 443 >UniRef50_C2HPK6 Crossover junction endodeoxyribonuclease ATPase n=8 Tax=Lactobacillus RepID=C2HPK6_LACAC Length = 478 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 138/429 (32%), Positives = 213/429 (49%), Gaps = 19/429 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 QPLA MRP+ L + +GQ HLLA GKPL + I+ L S++LWGPPG GKTTLA V+++ Sbjct: 54 QPLADLMRPKTLGEMVGQNHLLAKGKPLYQIIKEHILLSLLLWGPPGCGKTTLAYVMSQT 113 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 E+ +A ++++ I++ + +L +DE+HR K QD LP++E+G Sbjct: 114 LRLPFEKFNASIQNKSQLQKLIQK-----HPDESFVLLLDEIHRLTKPIQDYLLPYLENG 168 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 + +G TTENP + A+ SR +++ + EDIE VL +A E+ + LP Sbjct: 169 HVLLVGTTTENPIMSIQPAIRSRCQIFEFYPIKAEDIELVLIKAAEEHL------NFDLP 222 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + AIA NGD R +LN L+ + M + + + E A + FD Sbjct: 223 KKQAHAIANSGNGDVRVSLNILDTLNAMHPQN------ISMANIEEFARNQHFAFDKDAT 276 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 + YD +SA S+ GS DAALY+ A I+ +G D V RR +A+ DVG AD + Sbjct: 277 KHYDYLSAFQDSIEGSDADAALYYLAVILKSG-DLESVVRRLKDLAALDVGLADSARVAQ 335 Query: 314 AIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLR 373 I + +G +A A + LA AP+S++ A+ A DA D+ +P +L+ Sbjct: 336 VITLANTALEIGLPRASTHLAMATILLAVAPRSDSAMQAYYQAAKDAEHPADHPMPKYLQ 395 Query: 374 NAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAW 433 + K ++ E + D + A E Y P ++ YY P E K+ + Sbjct: 396 DYHYKGAGKLRGAGEMQNMFDLPHNIARQE-YLPKDLVGKHYYVPAQNKAEEKLYSQYQA 454 Query: 434 LAEQDQNSP 442 L + P Sbjct: 455 LYKYIYQKP 463 >UniRef50_A9NGG4 Holliday junction DNA helicase-like ATPase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGG4_ACHLI Length = 412 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 130/427 (30%), Positives = 217/427 (50%), Gaps = 22/427 (5%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 +PLA+RMRP+N + GQ HLL+ L + IE S IL+GPPGTGKTT+A++ + Sbjct: 1 MEPLASRMRPKNFDEVYGQDHLLSKHGVLTKMIEKKKYLSFILYGPPGTGKTTIAKLFSD 60 Query: 73 YANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIED 132 + D +A T ++++ ++ + ++ VDE+HR QD LP +E Sbjct: 61 KSMLDTYFFNASTDNKAKLKDILDMTAYH-----DVLIIVDEIHRMKTDIQDYLLPFLES 115 Query: 133 GTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVL 192 G IG TT NP +N A+ SR +Y +K+LS +DIE + A++ Y DI L Sbjct: 116 GKAIMIGLTTLNPYQSINMAIRSRCHLYEIKALSDKDIEAAILNAIQ-----YLDHDIHL 170 Query: 193 PDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKG 252 D+ AI N + R ALN LE + + + + ++ ++AG+ D+ Sbjct: 171 TDDALAAIIRASNSEIRSALNLLESASLV----VDDGQKITSNIIRKLAGKPQLSLDDHE 226 Query: 253 DRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + +++++SAL KS+RGS DA++++ AR++T G D + RR + IA ED+G A+P Q Sbjct: 227 NHYFEMLSALQKSIRGSDVDASIHYLARLLTLG-DLEIIFRRLIVIAYEDIGLANPTMGQ 285 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 +AA G E ++ +V +A +PKSN Y+A A+ D + +P H+ Sbjct: 286 KVLAAIQAAKMTGLPEARIPLSVIVVDMALSPKSNTAYSALDKAMEDFQNGLAGPIPKHI 345 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR-GLEGKIGEKL 431 N K + Y+Y H++ + + + + P + YY P + E + ++L Sbjct: 346 DNKYIKQ-----HPDSYKYPHNDPGSLNS-QTHLPDNLLDKTYYVPKDESAYEKALKDRL 399 Query: 432 AWLAEQD 438 + Sbjct: 400 KLIDSIK 406 >UniRef50_B1AII3 ATPase, AAA family n=14 Tax=Ureaplasma RepID=B1AII3_UREP2 Length = 408 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 127/414 (30%), Positives = 200/414 (48%), Gaps = 20/414 (4%) Query: 22 PENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERI 81 P ++ +GQ++LL + R + + ++I +GPPG GK++LA+V+A+ Sbjct: 12 PHSIDDIVGQKYLLDEIGIIRRMVNHHQVFNLIFYGPPGVGKSSLAKVLAQDLKVPFAFF 71 Query: 82 SAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGAT 141 + V K++ + IE+A N I+ +DE+HR NK +QD LP IE I T Sbjct: 72 NPVVDSKKQLMQIIEQALDLNNF----IIIIDEIHRLNKDKQDILLPIIEANKIKLFATT 127 Query: 142 TENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIA 201 TENP F +N AL SR ++ LK L++ I + + + + + + Sbjct: 128 TENPFFVINPALRSRCQLLSLKPLTSSQISERIKTLINVEEV--------FEPQAFNLLI 179 Query: 202 ELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISA 261 NGD R +NTLE++ + + + + LL I E A + GD +DL SA Sbjct: 180 NKTNGDLRAVINTLEIIYLLYK-----EHKVDYVLLKRIMQESYALGSSDGDEIHDLKSA 234 Query: 262 LHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCF 321 HKS+RGS DAALY+ AR+I G D + RR ED+G A+P + Sbjct: 235 FHKSMRGSDCDAALYYLARLIIIG-DFEAIYRRVSVCVHEDIGLANPNLCLRVDQGINSC 293 Query: 322 TRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMK 381 +G E + +A ++ + + KSN+VY A++ A DA Y +P H+R+A Sbjct: 294 RFLGYPENQVILANLVLQICLSNKSNSVYLAYQKAFEDAANGKQYSIPNHVRDAHYASAI 353 Query: 382 EMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLA 435 ++G Y+Y HD N Y + Y P E+ +YY P N E K+ + Sbjct: 354 KLGVH-GYKYPHDFKNNYVNQQ-YLPRELTNKKYYVPQNNEQEFKLNQNQQKFK 405 >UniRef50_C1SKW4 AAA ATPase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SKW4_9BACT Length = 426 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 141/427 (33%), Positives = 210/427 (49%), Gaps = 24/427 (5%) Query: 18 ARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANAD 77 +RP GQ+HL+ + +E G S++L GPPGTGKTTLAE+I ++ N Sbjct: 5 EELRPRAFDDIAGQKHLIGVDSVFRKMVEDGGFDSVVLVGPPGTGKTTLAEIIGKHLNMP 64 Query: 78 VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITF 137 + A T+G ++++ +E AR G+ ++FVDE+HRFNK+QQ L I+ G Sbjct: 65 YFSLHAATAGSGDLKQIMESARHA---GKTVLVFVDELHRFNKTQQVLLLNMIDSGLAKL 121 Query: 138 IGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETR 197 IGA+TENP L L SR+ V+ L+ L D++++ + Y D+V D+ Sbjct: 122 IGASTENPYHNLIQPLRSRSFVFRLERLEKPDLKELFEKVKLYFKERYKADDVVCTDDEF 181 Query: 198 RAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYD 257 + + +GD RR L+ LE+ A D VL + + +R+ D YD Sbjct: 182 DRLVKASDGDGRRFLSVLELSAVNGSFKDD---VLHLGVSKALEHTTDSRY--NADEHYD 236 Query: 258 LISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAA 317 ++SA+ KS+RG+ PDAA W R++ G +P + RR L ASED+GNA P +A Sbjct: 237 MLSAMIKSIRGTDPDAAALWCFRLLECGMEPEAIFRRLLISASEDIGNAFPXXXXXXXSA 296 Query: 318 WDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPT 377 + F VG EG+ +A I YLA PKSN Y A A +VP LR Sbjct: 297 YSAFQAVGRPEGDIILAHVITYLASCPKSNRSYKAMWAVKEYLEN-NTPNVPYPLRTE-- 353 Query: 378 KLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQ 437 G+ Y Y D + + E+ +Y P++ G E KI E+L L + Sbjct: 354 --------GKGYHYPFDH-GGFVVQDYSGTDEV----FYDPSDAGFEMKISERLKRLWGK 400 Query: 438 DQNSPIK 444 ++ K Sbjct: 401 EKTYGKK 407 >UniRef50_D1J7Q3 ATPase, AAA family n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7Q3_MYCHP Length = 404 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 137/430 (31%), Positives = 210/430 (48%), Gaps = 31/430 (7%) Query: 16 LAARMRPENLAQYIG-QQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA 74 LA +RP+ L +I Q+ K + IE S I +G PGTGKTT++ ++A Sbjct: 5 LANLIRPKILEDFICPQE----QKKLFQKIIENNDYRSFIFYGKPGTGKTTISYILANAL 60 Query: 75 NADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134 + E +A ++ + + + + N IL +DE+HR NK +QD LP++E+ Sbjct: 61 KVNYEYFNAA---IENKEDLVHKLKLN------KILIIDEIHRLNKDKQDILLPYLENDL 111 Query: 135 ITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD 194 IT TTENP F+LN AL SR + + + +D+ L A + L Sbjct: 112 ITIYATTTENPYFKLNPALRSRCSIIEITKPTIQDLSSCLKNACLKTF------GVDLNK 165 Query: 195 ETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDR 254 + +A NGD R ALN L+++ + + + E + +I D GD Sbjct: 166 DIADYLALQANGDFRSALNNLDLIMLIFKDQE-----FSLEAIKKIIPSIQFSSDESGDN 220 Query: 255 FYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVA 314 YD +SA HKS+RGS DAALYW II +G D + RR L + EDVG A+P+ Sbjct: 221 HYDYLSAFHKSLRGSDIDAALYWGFIIIKSG-DFDGLFRRMLCASYEDVGMANPKLGSEV 279 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 ++A +CF R+G EG I QAI+ + +PKSN VY++ + ++VP+HL++ Sbjct: 280 LSAIECFERIGMPEGYLPITQAILNICLSPKSNTVYSSSTLIKSIIDSGNIFEVPIHLKD 339 Query: 375 APTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWL 434 A K ++ G Y+Y HD N Y + Y P E+ + +G E KI + Sbjct: 340 AHYKSAAKLKRGLNYKYPHDYKNNYIDQQ-YLPNELKDKIHIELNGQGYEQKIKQY---- 394 Query: 435 AEQDQNSPIK 444 + +N K Sbjct: 395 WDLIKNKGEK 404 >UniRef50_Q043K3 Helicase subunit of the Holliday junction resolvase related ATPase n=11 Tax=Lactobacillus RepID=Q043K3_LACGA Length = 429 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 129/430 (30%), Positives = 212/430 (49%), Gaps = 19/430 (4%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARY 73 +PLA +RP++L+Q++GQ+ L+ G+PL + I+ S++LWGPPGTGKT+LA++IAR Sbjct: 8 KPLADLIRPKDLSQFVGQKDLIEEGRPLYQIIKKHVPISLLLWGPPGTGKTSLAQIIARE 67 Query: 74 ANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG 133 + + +A ++ + I +L +DE+HR + QD LP++E+G Sbjct: 68 FDYPLATFNASIDNKAKLTQIINTYPYQSF-----VLLIDEIHRMTTTLQDFLLPYLENG 122 Query: 134 TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLP 193 I IGATTENP + A+ SR +++ K+LS EDIEQVL +A+ + + ++I Sbjct: 123 RILLIGATTENPIMSIVPAVRSRCQIFEFKALSDEDIEQVLIRAL-KEVFHFKDENI--D 179 Query: 194 DETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGD 253 + + IA +GD R ALN LE + + L E + + + +D K Sbjct: 180 RKAVKIIAISADGDLRVALNLLETIHAV-------NEDLSVEEVKQFVKGQHFAYDRKAT 232 Query: 254 RFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP-RAMQ 312 + YD ++A S+ GS DAALY+ A ++ G D V RR I +G A+P +A Q Sbjct: 233 KHYDYLAAYSDSIAGSDTDAALYYLAVLLKNG-DLASVVRRLREIPYTYIGLANPEQATQ 291 Query: 313 VAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHL 372 + IAA ++G + + + A + + +PKS ++ D + +P L Sbjct: 292 IVIAANQA-EKIGMPKAKYPLMFATMLMCLSPKSGVFDEIWQKLDEDTDHPSKHPMPRGL 350 Query: 373 RNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLA 432 R+ K +E+ G + A + Y P + RYYF + E K ++ Sbjct: 351 RDMHYKHSEEITGGGLIDNPFAQPFQIAK-QNYMPKGLEGKRYYFAKDNASEKKFEQQYL 409 Query: 433 WLAEQDQNSP 442 L Sbjct: 410 KLHRYIYGKD 419 >UniRef50_A2QW62 Function: WHIP of M. musculus is involved in aging control n=3 Tax=Aspergillus RepID=A2QW62_ASPNC Length = 513 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 136/425 (32%), Positives = 223/425 (52%), Gaps = 21/425 (4%) Query: 2 SNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGT 61 + L+ + PLA ++RP +GQ+ L+ L R IE L ++ILWGPPG+ Sbjct: 92 AGLATEQLHLRHAPLAEQVRPRCFDDIVGQKSLIGPNGTLRRLIEQDELPNLILWGPPGS 151 Query: 62 GKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNK 120 GKTT+A +I V IS++T+ E R+ + +A + GR I+F DE+HR + Sbjct: 152 GKTTIARIIGPMMRRKVYEISSLTTITTEYRDIVTKA---THDGRNKSIIFCDEIHRLTR 208 Query: 121 SQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMED 180 QQD FL + IT IGATTENPS ++ L+ + RV+ + +T D+ +L +++ Sbjct: 209 PQQDIFLDAMRRNKITLIGATTENPSLNIHHTLVYKCRVFTVAKPTTTDLATILRRSL-- 266 Query: 181 KTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEI 240 ++ + +L DE + IA +GD+R ALN LE+ D+ + K LK L Sbjct: 267 ISQTHLKSSPLLDDEFLQYIAGFADGDSRTALNVLEIATDLCRRPNMTKEKLKYSL---- 322 Query: 241 AGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS 300 +S +D GD+ YD ISALHKS+RGS PDAALY+ R++ +G +PL++ARR + S Sbjct: 323 --TKSLLYDRSGDQHYDTISALHKSIRGSDPDAALYYLVRMLQSGENPLFIARRLIVATS 380 Query: 301 EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADA 360 ED+G A+ A + + ++G + + A+AQ ++ + + KS Y ALA Sbjct: 381 EDIGLANNVLQTYATSIYLMIEKLGINDAQSALAQLVITMCLSKKSTRSYRGLNNALAAV 440 Query: 361 RER--PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANA---YAAGEVYFPPEIAQTRY 415 +E D +P H+ + +L++E + D + + + + P + ++ Sbjct: 441 KEPGMGDLPIPFHILDRRPELLRE----ADLVVTTDSQQSQKRLPSTQGFLPHALEGRKF 496 Query: 416 YFPTN 420 T+ Sbjct: 497 LEDTD 501 >UniRef50_A5IXK5 ATPase, AAA family n=2 Tax=Mycoplasma RepID=A5IXK5_MYCAP Length = 404 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 125/430 (29%), Positives = 195/430 (45%), Gaps = 27/430 (6%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR 72 + LA +RP+ L IGQ+ ++ + L + S I +G GTGKT+ A +A Sbjct: 1 MKNLANELRPKTLDDIIGQKSVV---ELLKKVARDKIYSSFIFFGESGTGKTSAAVALAN 57 Query: 73 YANADVERISAVTSGVKE-IREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE 131 + +A + E I+ + +L +DE+HR NK +QD L ++E Sbjct: 58 DLGLKYDYFNASVNSKAELIKMLADND----------VLIIDEIHRLNKDKQDILLSYLE 107 Query: 132 DGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIV 191 I TTENP F +N AL SR ++ LS +++ + + ++ Y Sbjct: 108 FDKIIIYATTTENPYFRVNPALRSRMQILQFTKLSEQEMFEGIKHNLKKYFPDY-----Q 162 Query: 192 LPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNK 251 + + T + +L NGD R LN L+++ M++ + + + + + S D Sbjct: 163 MDESTIKVFVKLSNGDYRSCLNNLQILTLMSK-----NKQISLDDIKKFVPNISFYSDEN 217 Query: 252 GDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAM 311 Y+ +SA HKS+RGS DAALY+ A I+ +G D + RR +A + EDVG ADP Sbjct: 218 SSAHYNNLSAFHKSLRGSDVDAALYYGAIIVKSG-DLQGLFRRLIACSYEDVGLADPNLQ 276 Query: 312 QVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVH 371 A DC +G E I AI+ +A A KSN+VY A + YDVP Sbjct: 277 IRVKNAIDCAELLGLPEARLPIFYAIISVALASKSNSVYEAISNVEGYINQGNIYDVPKF 336 Query: 372 LRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKL 431 LR+ ++G Y+Y HD N E Y P E +++FP KI E Sbjct: 337 LRDGHYASAVKLGDSIGYKYPHDFPNHIVKQE-YLPKEAKGNQFFFPKETDS-KKITEYY 394 Query: 432 AWLAEQDQNS 441 ++ + Sbjct: 395 KFIKQLQGEK 404 >UniRef50_Q4SLJ4 Chromosome 15 SCAF14556, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SLJ4_TETNG Length = 499 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 121/410 (29%), Positives = 182/410 (44%), Gaps = 76/410 (18%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIA-- 71 +PLA +RP+ L +Y GQ ++ L +E+ + S ILWGPPG GKTTLA +IA Sbjct: 159 KPLADILRPDTLEEYFGQNKVIGQQTLLRSLLESEEIPSFILWGPPGCGKTTLAHIIAGK 218 Query: 72 --RYANADVERISAVTSGVKEIREAIERARQNRNAGRRT-ILFVDEVHRFNKSQQDAFLP 128 R A +SA ++ V ++RE I++A+ +R +LF+DE+H Sbjct: 219 CKRKGTARFVTLSATSASVSDVREVIKQAQNELRLCKRKTVLFIDEIH------------ 266 Query: 129 HIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQ 188 + + G + Sbjct: 267 --------------------------------RFNKSQQDTFLPHVECG-TVILIGATTE 293 Query: 189 DIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARF 248 + + A + R A S + ++K E + E + Sbjct: 294 NPSFQAQVS---ASKADTSGRSA---------------SKEILVKEEHIKEGLQRSHILY 335 Query: 249 DNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADP 308 D G+ Y+ ISALHKS+RGS +A+LYW R++ G DP+YVARR + AS ADP Sbjct: 336 DKAGEEHYNCISALHKSMRGSDENASLYWLGRMLEGGEDPIYVARRMVRFAS----LADP 391 Query: 309 RAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARE--RPDY 366 A+ A++A+ +G E E +AQ +YLA APKS VY A+ A R P Sbjct: 392 AALSQAVSAFQACHFIGMPECEVILAQCAIYLARAPKSIEVYQAYANVKACLRNHKGPLP 451 Query: 367 DVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY 416 VP+HLRNAPT+LMK++GY + Y+Y + + Y P E+ ++ Sbjct: 452 SVPLHLRNAPTRLMKDLGYSKGYKYNPSFSG--PVEQEYLPQELQGVNFF 499 >UniRef50_Q6CD04 YALI0C05038p n=2 Tax=cellular organisms RepID=Q6CD04_YARLI Length = 626 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 152/490 (31%), Positives = 213/490 (43%), Gaps = 79/490 (16%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 PL RP+ L GQ+ L+A L R + G + S+I WGPPG GKTTLA Sbjct: 118 EPARHTPLPELCRPQTLDDISGQKELMA---VLRRFVAYGRIPSIIFWGPPGVGKTTLAR 174 Query: 69 VIARYANADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQDAFL 127 ++A+ + +SA + V ++++ I++A +R TILF+DE+HRF+K+QQD L Sbjct: 175 ILAKTSGNRFVELSATQNNVADVKKVIDQANNEWKLLKRGTILFIDELHRFSKAQQDVLL 234 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 P +E G IT IGATTENPSF L AL SR RV LK LS +DI++V+ +++ Sbjct: 235 PAVEKGDITLIGATTENPSFRLVGALTSRCRVLTLKKLSMKDIKEVVERSLVKYNDTAEH 294 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + I LP E IA + +GD R ALN LE++ + ++ + E E + + Sbjct: 295 EVI-LPTEVIDYIAGIADGDVRSALNILELVVSVCDIVEEQPEKAVEEEKPEETKDTTTE 353 Query: 248 FDNKGDRFYDLISA-------LHKSVRGSAPD----------------------AALYWY 278 D A L S P L Sbjct: 354 ACAANDTTDATNEATPDDSAILSDSEAAENPASSSQDASSQLTVTASPPKRYRTTTLREI 413 Query: 279 ARIIT------------------------AGGDPLYVA----------RRCLAIASEDV- 303 +I G DP L IA V Sbjct: 414 KNVIRRTHVLYDKNGDNHYDAISAFHKSIRGSDPDATLFYLGKMLKSGEDPLYIARRMVR 473 Query: 304 ------GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAF---K 354 G AD + + AA+ +VG EG+ +A A V LA A KS VY A+ K Sbjct: 474 IASEDIGLADDSLLPLCTAAYTGIQQVGMPEGDCILAHAAVKLALADKSVKVYKAWGMVK 533 Query: 355 AALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTR 414 AL+D ++P+HLRNAPTKLMKE+GYG+EY+Y + Y P + Sbjct: 534 EALSDEHGLLAAEIPIHLRNAPTKLMKELGYGKEYKYNPRFLGGKVKQD-YMPEGYENVK 592 Query: 415 YYFPTNRGLE 424 + + G E Sbjct: 593 FMPERHLGTE 602 >UniRef50_C5K6M1 Werner helicase interacting protein, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K6M1_9ALVE Length = 622 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 168/440 (38%), Positives = 234/440 (53%), Gaps = 57/440 (12%) Query: 15 PLAARMRPENLAQYI---------GQQHLLAAGKPLPRAIE--------------AGHLH 51 PLA R RP + A + G + + + R I+ + Sbjct: 111 PLAQRARPTSSADLVYETDSNISEGPGNAIGGVSTVMRIIKYYEALSQSAATISHHPTVP 170 Query: 52 SMILWGPPGTGKTTLAEVIARYANA-----DVERISAVTSGVKEIREAIERARQNRNAGR 106 SMI WGPPG GKTTLA+++ R ++SAV +GV ++ +E + G+ Sbjct: 171 SMIFWGPPGCGKTTLAQLLCRSLTQSGLPWRHTKLSAVNAGVNDV--GLEIPKAESMEGK 228 Query: 107 RTI----LFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLL 162 TI LF+DE+HRFNK+QQDA LPH+E GT+T IGATTENPSF+ N AL+SR +V Sbjct: 229 VTISGTLLFLDEIHRFNKAQQDALLPHVESGTLTLIGATTENPSFQCNRALVSRCQVIKF 288 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPD---ETRRAIAELVNGDARRALNTLEMMA 219 SL+++ I ++L +A+ + + + + R +AE GD R +LN LE+ Sbjct: 289 SSLTSDSIGRILRRALTSYY-----PQVAVDESTGDLLRILAEFGMGDVRASLNALELAC 343 Query: 220 DMA----EVDDSGKRVLKPELLTEIAGERS------ARFDNKGDRFYDLISALHKSVRGS 269 D+A ++ L+ E + E S +D GD YDL SAL KS+RGS Sbjct: 344 DLAMMGPRCGEAASSGLRREHIEEAMATSSSGRHRLLGYDKNGDIHYDLASALQKSIRGS 403 Query: 270 APDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEG 329 DAA YW R++ G P YV+RR + IASEDVG ADP+A+Q+A AA G E Sbjct: 404 DKDAAAYWTTRMLLGGEPPEYVSRRLMRIASEDVGLADPQALQLAAAAHTVTMSTGMPEC 463 Query: 330 ERAIAQAIVYLACAPKSNAVYTAFKAALADARE-RPDYDVPVHLRNAPTKLMKEMGYGQE 388 A+ + +YL APKSNAVY A+K A + D +VP+HLRNAPT LMKE+GYG++ Sbjct: 464 STALLEVALYLCDAPKSNAVYVAYKNASKAIEKATTDSEVPLHLRNAPTGLMKELGYGRD 523 Query: 389 YRYA----HDEANAYAAGEV 404 Y Y + A + Sbjct: 524 YIYTNEPRPTQPGELAPEQT 543 >UniRef50_B0EGY1 ATPase WRNIP1, putative n=2 Tax=Entamoeba RepID=B0EGY1_ENTDI Length = 482 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 144/455 (31%), Positives = 232/455 (50%), Gaps = 68/455 (14%) Query: 5 SLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKT 64 S D ++ PLA R RP+ L IGQ+ + G P I L S IL+GPPG+GKT Sbjct: 20 SNSDKDISYIPLAERQRPKRLEDIIGQESAIGIGTPFNSMILNDSLQSTILFGPPGSGKT 79 Query: 65 TLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRR-TILFVDEVHRFNKSQQ 123 T+A +I +N+ +IS+VT+ +E++ IE+A++ + ++ TILFVDE+H NK QQ Sbjct: 80 TIARIIKNMSNSFFVQISSVTTSKEELKNVIEQAKERKKREKKDTILFVDEIHTLNKLQQ 139 Query: 124 DAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTR 183 D FLP IE+G+I IGATTENPSF+LN+AL+SR + +LK L E I +++ +A++++ Sbjct: 140 DIFLPAIENGSIILIGATTENPSFQLNNALMSRCNLVILKRLENESINKIIKKAIKEE-- 197 Query: 184 GYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK-------------- 229 Y ++ + I++ +GDAR LN LE + + + Sbjct: 198 -YQNNKFIIDEAGINIISKYADGDARNGLNCLEFIFNYFNHLSEEELKEIIKSNESENNT 256 Query: 230 ---------------------------------RVLKPELLTEIAGERSARFDNKGDRFY 256 L E++++ +++ ++D G+ Y Sbjct: 257 IIIDENDCTISKKNELENTELSYQTIEEPEVIHITLTSEIISKFLQKQNFQYDKSGEDHY 316 Query: 257 DLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIA 316 + ISA HKS+RG +AA+YW R+I +G +P YVARR + A+ED+G AD AM VA+ Sbjct: 317 NTISAFHKSMRGGDENAAVYWLGRMIFSGENPKYVARRMIRFATEDIGLADTNAMVVAMN 376 Query: 317 AWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAP 376 + +G + + +A+ +YL A KS A+Y A +E+P+Y VP +R + Sbjct: 377 TFQAVEILGYPDCKTVLAECCLYLTRAKKSTAIYKATLTLKKMVKEQPNYIVP--IRVST 434 Query: 377 TKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIA 411 + + + + P ++A Sbjct: 435 SS---------------EHPTETNQIQTFLPDKLA 454 >UniRef50_Q7NAV9 Predicted ATP/GTPase n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAV9_MYCGA Length = 413 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 112/420 (26%), Positives = 209/420 (49%), Gaps = 19/420 (4%) Query: 20 MRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVE 79 +PE++ IGQ+HLL L R I+ +S+++ G PG GKTTL ++ N Sbjct: 12 YQPESVEDIIGQKHLLHEYGILRRMIDLRKPYSLLVTGEPGIGKTTLCNILISEMNLPSF 71 Query: 80 RISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG 139 ++ + ++E+++ I +A++ + ++ +DE+HR ++ +QD + ++ + G Sbjct: 72 SFNSASDSLQELKQFISKAKEL----NQCVIIIDEIHRLHRDKQDLLIKGLDAKSFILFG 127 Query: 140 ATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRA 199 TTENP F +N A+ SR L + ++ ++ + + ++ K + + D+ Sbjct: 128 ITTENPYFTINPAIRSRVHTIELVNPTSIELFEGYKKIVQQKNI------VTISDDILYK 181 Query: 200 IAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLI 259 IA +VNGD R+ +N +E++ + + E+L + + + + GD F+DL Sbjct: 182 IANMVNGDLRKGINIIELLDIYYK-----NVEITEEILKNVI-DNNVTLASYGDTFHDLK 235 Query: 260 SALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 SAL KS+RGS PDAA+Y+ A++I D + ++RR +A A ED+G A+P A Sbjct: 236 SALQKSIRGSDPDAAVYYLAQLIAT-KDLITISRRLIACAYEDIGLANPDLCSRVYLATQ 294 Query: 320 CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKL 379 G E + ++ ++ +A + KS++ Y A AL + +VP H++ P L Sbjct: 295 AAKEAGFPEANQILSSIVIEMALSEKSSSAYEAISDALVEVANGNIQNVPWHIKKNPINL 354 Query: 380 MKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYY-FPTNRGLEGKIGEKLAWLAEQD 438 + Q+Y+ H+ N + + + Y P EI +YY + E I + + Sbjct: 355 SSTLNNMQKYKNPHNYDNHWVS-QDYLPREIRDKKYYIKQAHNYNEKLINDYWLKWRKDK 413 >UniRef50_Q8EWR1 Predicted ATPase n=1 Tax=Mycoplasma penetrans RepID=Q8EWR1_MYCPE Length = 409 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 106/418 (25%), Positives = 197/418 (47%), Gaps = 22/418 (5%) Query: 24 NLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISA 83 + + I + + + IE L S++ +G PG GK+ + I + N + ++ Sbjct: 13 SFDEMICKDVIFPKDSIIINMIENNDLFSILFFGNPGVGKSASIQFILKKLNKNFYYFNS 72 Query: 84 VTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTE 143 T+ ++ E +E A + I+ ++E+HR NK +QD L ++E I + TTE Sbjct: 73 TTNNKNDLLEILELA----TEDNKPIIIIEEIHRLNKDKQDLLLMYLEKDMIIVLATTTE 128 Query: 144 NPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAEL 203 NP F++N A+ SR +Y ++++++ +++ + + +E+K + L ++ AI E+ Sbjct: 129 NPFFKVNPAIRSRLLLYRIENINSAVLKEEVIKYLENK-------KVKLSNKVVEAIVEI 181 Query: 204 VNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALH 263 D R+ L+++ + L E+ ++ D + YDL+SA H Sbjct: 182 SKSDFRQIFFYLKIVLKYYQNKSDDIV------LKELGKITNSLIDRRATNHYDLLSAFH 235 Query: 264 KSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTR 323 KS+RGS P+AA+Y+ A+++ +G D + V RR A+ ED+G A+ AA + Sbjct: 236 KSIRGSDPNAAVYYLAQLLESG-DLISVYRRLYAVVYEDIGLANSGLGPKVNAAVNASEA 294 Query: 324 VGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEM 383 +G E ++Q + L +PKSN+ A A+ + P HLR+A ++ Sbjct: 295 LGLPEARIPLSQITIELCLSPKSNSAIMAIDEAIQSVNKEALSP-PNHLRDAHYASAVKL 353 Query: 384 GYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNR-GLEGKIGEKLAWLAEQDQN 440 + Y+Y HD +Y E Y P E+ +Y P E K + + ++ Sbjct: 354 NV-KGYKYPHDYNFSYVEQE-YLPKELKNKEFYKPNKYSQNENKFVDYWNKIKSNNKQ 409 >UniRef50_UPI000192678D PREDICTED: similar to Werner helicase interacting protein n=1 Tax=Hydra magnipapillata RepID=UPI000192678D Length = 342 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 168/374 (44%), Positives = 230/374 (61%), Gaps = 35/374 (9%) Query: 70 IARYANADVERISAVTSGVKEIREAIERARQNR--NAGRRTILFVDEVHRFNKSQQDAFL 127 +A +A ISAV G+KEIREA+++A R RRTI+FVDEVHRFNKSQQ Sbjct: 1 MADAFDAQFITISAVLGGIKEIREAVDQALNARDGLEQRRTIIFVDEVHRFNKSQQ---- 56 Query: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGG 187 +NSALLSRA VY+L+ L + +++++ +A + Sbjct: 57 ---------------------VNSALLSRAAVYVLQPLDADSLKKIVLKAQTEYALP--- 92 Query: 188 QDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 + + +GDARR LNTLE +A A + + + + L ++ GER R Sbjct: 93 ---AIESIAIDRLIAYADGDARRLLNTLETLAIAARQEQAPE--ITDAWLLKVLGERMRR 147 Query: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307 +D G++FYD ISALHKSVRGS P+A+LYW+ R++ G DP Y+ARR + +A+ED+G AD Sbjct: 148 YDKGGEQFYDTISALHKSVRGSDPNASLYWFTRMLDGGADPRYMARRFIRMAAEDIGLAD 207 Query: 308 PRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 PRA+++A+ A D + R+G EGE A+A+ +VYLA APKSNAVY AF A A ++ Sbjct: 208 PRALRLALDAADVYERLGSPEGELALAECVVYLAVAPKSNAVYKAFNEAKAFVKKDGTRP 267 Query: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKI 427 VP+HLRNAPTKLMKE+ YG+ YRYAHDE +AAGE Y P + T +Y P RGLE +I Sbjct: 268 VPMHLRNAPTKLMKELDYGKGYRYAHDEEGGFAAGERYLPDGMPDTDFYRPVERGLEIRI 327 Query: 428 GEKLAWLAEQDQNS 441 EKL L +++Q Sbjct: 328 AEKLRDLKDRNQKK 341 >UniRef50_Q6KHC7 ATPase n=3 Tax=Mycoplasma RepID=Q6KHC7_MYCMO Length = 372 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 117/392 (29%), Positives = 182/392 (46%), Gaps = 22/392 (5%) Query: 50 LHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTI 109 + S I +G G GKTT A VIA+ + + +E +E+ N I Sbjct: 1 MSSFIFYGESGIGKTTAATVIAKEKQESYDVFNPTIHSK---KELLEKLAIN------KI 51 Query: 110 LFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTED 169 L +DE+HR NK +Q+ L ++ED I TTENP F++ +L SR ++ LS + Sbjct: 52 LIIDELHRLNKDKQEILLSYLEDDKIILYATTTENPYFKIIPSLRSRLKILRFNKLSETE 111 Query: 170 IEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGK 229 I Q L +E I + D+ +I + GD R A+N L+++ + Sbjct: 112 IFQGLKNIIEKYKL-----KIKINDDLLLSIVKFSAGDFRNAINNLDLIETIYP-----N 161 Query: 230 RVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPL 289 + E + +I + D D+ YD +SA HKS+RGS PDAALY+ ++ GD Sbjct: 162 TNVDFESIKKIFPSMNFYTDKDADKHYDTLSAFHKSLRGSDPDAALYY-GMLLAKAGDID 220 Query: 290 YVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV 349 + RR + +A ED+ A+P A AA + RVG E +A+ I+ +A +PKSN+ Sbjct: 221 ALLRRLIMVAYEDIALANPNASIKVDAAINAIERVGFPEANTILAKIIIEIALSPKSNST 280 Query: 350 YTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPE 409 Y + L YD+P HL++ K + + Y Y HD N Y + Y P E Sbjct: 281 YVSMNKILDKINNGNIYDIPDHLKDTHYKNSAKFNRPK-YLYPHDFENNYVN-QNYLPIE 338 Query: 410 IAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNS 441 + + ++ N E KI + +N Sbjct: 339 LEKNHFFEFANNQNEQKIKSYWEKIKIASRNK 370 >UniRef50_A8BYS0 ATPase, AAA family n=2 Tax=Giardia intestinalis RepID=A8BYS0_GIALA Length = 509 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 124/416 (29%), Positives = 192/416 (46%), Gaps = 25/416 (6%) Query: 16 LAARMRPENLAQYIGQQHLLA-AGKPLPRAIEAGH----LHSMILWGPPGTGKTTLAEVI 70 L+ R+RP + + IG H+L+ + R E L S+I+ GPPGTGKT+ A + Sbjct: 97 LSMRLRPTTIDEIIGNHHILSLTDGVISRIYEQSRTTHVLQSIIITGPPGTGKTSFARLY 156 Query: 71 ARYAN--ADVERISAVTSGVKEIREAIERA---RQNRNAGRRTILFVDEVHRFNKSQQDA 125 A+ + + + V E+ + ER R N R LFVDE HR K+QQD Sbjct: 157 AKSFDPSYRLIEFKPGQATVAELNKVTERIYTDRANSLTSARVCLFVDEAHRCTKAQQDR 216 Query: 126 FLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME---DKT 182 L +E+G +T I ATT +P + L SR + +L+++DI Q+ + + DK Sbjct: 217 LLSAVEEGVLTLILATTSSPYTAIIEGLRSRCFLLSFNALTSKDILQICVRGLNSMLDKL 276 Query: 183 RGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAG 242 DI + I GD R+AL+ LE+ + + G +L G Sbjct: 277 DTSVPLDICVEPSAIAKIVVAARGDGRKALSLLELSVTGGRITEQGVALLLSGGAH---G 333 Query: 243 ERSARFDNKGDRF-YDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASE 301 + ++ Y+ +S + K++R S P A+++ A ++ DPLY+ARR + ASE Sbjct: 334 DAIMHCTLNQEQVKYEGVSGMIKAIRASDPQGAIFYLAFLLRTAVDPLYIARRLIISASE 393 Query: 302 DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADAR 361 D+G AD +A+ VA++ + +G E A+AQ +YL+ APKSN+ TA A A Sbjct: 394 DIGLADSQALSVAVSCYRATEVIGLPEAHYALAQTALYLSLAPKSNSAGTALNNAFAAID 453 Query: 362 ERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYF 417 D P + K G Y Y H+ Y E P + +Y Sbjct: 454 SATPTDC------LPPEGYKSASAGANYVYPHNY-GGYVL-ESTLPESLRGQIFYS 501 >UniRef50_Q3A7L0 DNA polymerase III, gamma/tau subunits n=4 Tax=Desulfuromonadales RepID=Q3A7L0_PELCD Length = 582 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 80/428 (18%), Positives = 140/428 (32%), Gaps = 85/428 (19%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++ LA + RP++ +GQ+H+ + L AI+ G +H + G G GKT+ A + Sbjct: 1 MSYLVLARKYRPQSFDDLVGQEHV---SQTLGNAIKTGRVHHAFLFTGARGVGKTSAARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + E A +GV +IRE E R + Sbjct: 58 FAKALNCEQGLSPQPCNVCQSCREISAGQGLDVFEIDGASNTGVDDIRELRENIRYLPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R I +DEVH + + +A L +E+ FI ATTE ++ +LSR + + Sbjct: 118 SRYKIFIIDEVHMLSTNAFNALLKTLEEPPEHAKFIFATTE--PHKIPITILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + I L + + I + + + +A G R A +T + + Sbjct: 176 RKIPLPLIVARLKEIA-------AAEGISISERSLGLVARRGEGSMRDAQSTFDQVIAFC 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + + + G R +S+ G L+ R+ Sbjct: 229 G------DAVGEDDVQGLLGMVDRRLLVDT----------LESLLGHDSRRLLHCVCRVD 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNA---DPRAM-------------------------QVA 314 G R + V +P A+ V Sbjct: 273 ELGHSFRQFCRELVETLRSLVVLKVVPEPEALLDATPDELEELRRLSATVELEDLERAVT 332 Query: 315 IAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 + G + A+ A++ LA P S + D + R + VP R Sbjct: 333 VLVRTEAELAGSSFPRLALEMALLRLAHLP-SGRDVATLVRQVEDLQRRLESGVPPAERA 391 Query: 375 APTKLMKE 382 P Sbjct: 392 QPASYASS 399 >UniRef50_Q5KCD2 Helicase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KCD2_CRYNE Length = 397 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 131/350 (37%), Positives = 187/350 (53%), Gaps = 44/350 (12%) Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLL 162 GRRT+L +DE+HRFN++QQD LP++E G I IGATTENPSF++N ALLSR +V+ L Sbjct: 1 MTGRRTVLMIDEIHRFNRAQQDLLLPYVEKGWIQLIGATTENPSFKVNGALLSRCQVFTL 60 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETR-RAIAELVNGDARRALNTLEMMADM 221 + S E ++ +L A++ + I +A++ +GDAR+ALN LE+ Sbjct: 61 HAHSPESLQIILRNAVQ---TISESEPIPYLPSGLIPFLADVADGDARQALNGLELALRT 117 Query: 222 AEVDDSGKRVLKPELLTEIAGERSAR---------------------------------- 247 + D K + + +GE+ + Sbjct: 118 CQTMDETASAEKAQRVNSASGEKMEKEGQKDEFDAAVEEAEEDYQKKKRDEEIMDAVRRG 177 Query: 248 ----FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDV 303 ++ G+ YD+ISALHK +RGS AA+YW AR+IT G DPLY+ARR + +ASEDV Sbjct: 178 LQKGYNRTGEERYDMISALHKCLRGSDGSAAMYWLARMITGGEDPLYIARRLIVVASEDV 237 Query: 304 GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER 363 G AD A+ +A+A + +G E +A + YLA APKS Y A+ AA A Sbjct: 238 GLADNHALPLAMATYQACQTIGLPECRINLAHCVAYLAEAPKSTRSYKAYAAAEQLATMP 297 Query: 364 PDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQT 413 P VP+ +RNAPT+LMK++GYG+EY Y D + Y P + Q Sbjct: 298 PLPGVPLQIRNAPTQLMKKLGYGKEYAYNPDY--GHPVHNDYLPESLLQH 345 >UniRef50_A0LM15 DNA polymerase III, subunits gamma and tau n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM15_SYNFM Length = 602 Score = 337 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 76/389 (19%), Positives = 137/389 (35%), Gaps = 70/389 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ +A + RP+ + +GQ H+ + L AI + + HS + G G GKT++A + Sbjct: 1 MSYLVIARKWRPQTFEEVVGQPHVT---RTLQNAIRSSRIAHSYLFTGARGVGKTSIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E A G+ +RE E R Sbjct: 58 LAKALNCETGVTPTPCNVCSNCTEIRQGNAVDVLEIDGASNRGIDSVRELRETVRYRPAK 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 SRYKVYIIDEVHMLTTEAFNALLKTLEEPPEHVVFIFATTE--PHKIPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + + + L +D+ L + AIA +G R A + LE M + Sbjct: 176 RRIPSHMLVDHLRHIAAQ-------EDVALSEGVLYAIAREADGSMRDAQSLLEQMLSFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 L E + ++ G R ++ +V L I Sbjct: 229 R------DGLSDEEVLDVLGVIDRRSIHRTGT----------AVLEGDVRTCLDVVEDIY 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPA-EGERAIAQAIVYLA 341 G D R+ + V R+ + ++ +A+A Sbjct: 273 RRGMDIRRFCRQLCDYFRNLL---------VVAFGEGDSRRLDLPSDEKQLLAEAAGK-- 321 Query: 342 CAPKSNAVYTAFKAALADARERPDYDVPV 370 P+S +Y F+ L E +P Sbjct: 322 TTPES--LYLYFQTVLKSEEEIRRSTIPR 348 >UniRef50_C0ZHA0 DNA polymerase III gamma and tau subunits n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHA0_BREBN Length = 565 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 133/337 (39%), Gaps = 57/337 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L RP+ +GQ+H+ L A+ L H+ + GP GTGKT+ A++ Sbjct: 1 MAYTALYRVYRPQTFQDVVGQEHVT---TTLRNALRENRLSHAYLFNGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A GV+EIR+ ++ + + Sbjct: 58 MAKAVNCEQPIDGEPCNQCDTCRAISNGSVTDVLEIDAASNRGVEEIRDIRDKVKFAPSD 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ + FI ATTE +L + ++SR + + Sbjct: 118 VRYKVYIIDEVHMLTTEAFNALLKTLEEPPSHVIFILATTE--PHKLPATIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + +L + + Q + + ++ + +A++ G AR AL+ L+ + Sbjct: 176 HRIPLRVMVDLLQRICQ-------SQGVQVEEQALQLVAKMAEGGARDALSLLDQAISYS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + ++ + +I G + + S L + + + + + +++ Sbjct: 229 KDE------VRASDIMQITGTVAQSY----------FSVLARHIAENDIAQVMEQFDKVM 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNA-DPRAMQVAIAAW 318 G DP L + + P+ ++ Sbjct: 273 VQGKDPEQFLHDFLYYYRDMLLLKTAPQLEEIVERTM 309 >UniRef50_C9KLC0 DNA polymerase III, gamma and tau subunit n=2 Tax=Veillonellaceae RepID=C9KLC0_9FIRM Length = 631 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 81/372 (21%), Positives = 137/372 (36%), Gaps = 66/372 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L + RP+ +GQ+H+ + L AI +GH+ H+ + GP GTGKT+ A++ Sbjct: 1 MAYIALYRKWRPQTFKDLVGQEHI---SRTLANAITSGHIGHAYLFAGPRGTGKTSTAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + E +A G+ EIR+ E + Sbjct: 58 LAKALNCEHGPTPEPCGQCEQCRKIADGSSMDVFEIDAASNRGIDEIRDLRETVKFAPVD 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +A L +E+ + FI ATTE + ++ + SR + Y Sbjct: 118 GRYKVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTE--AHKVPPTIQSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ E+IE L + DE IA +G R AL+ L+ A +A Sbjct: 176 KRITVEEIESRLRYI-------TAEMKMEAEDEALAMIAIQADGGMRDALSILDQCAALA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E + E + +I G +D I + K++ AL A ++ Sbjct: 229 EGT------ITAERVRQILGLVG----------HDWIYKMTKALAARNVQEALQILAELL 272 Query: 283 TAGGDPLYVARRCLAIASED--------VGNADPRAMQVAIAAWDC--FTRVGPAEGERA 332 G D + V D A + F Sbjct: 273 RDGKDLKQILSELSLHLRSLMIFQAAGTVEAMDLYAEPQDVLQDQAKLFAPEVLPRMIAR 332 Query: 333 IAQAIVYLACAP 344 + +A+ + +P Sbjct: 333 LHEAMTEMKWSP 344 >UniRef50_B1I0B5 DNA polymerase III subunit gamma/tau n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0B5_LYSSC Length = 636 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 74/345 (21%), Positives = 141/345 (40%), Gaps = 65/345 (18%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 +N+ L + RP+ IGQ H+ L +I+ + H+ + GP GTGKT+ A+ Sbjct: 2 NNSNFVLYRKYRPQGFDNLIGQNHV---KNTLENSIKHNKVAHAYLFTGPRGTGKTSAAK 58 Query: 69 VIARYANAD---------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 + A+ N +E +A +GV +IR+ E+ G++ Sbjct: 59 IFAKLLNCQSPIDYNPCGECVCCQDSNTDIIEMDAASNNGVDDIRDLREKVNYAPAFGKK 118 Query: 108 TILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DEVH + + +A L +E+ I FI ATTE ++ + +LSR + Y + + Sbjct: 119 KVYIIDEVHMLSTAAFNALLKTLEEPPAHIVFILATTE--PHKIPATILSRCQRYDFRRI 176 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 S +DI + +E + + + ++ R I+++ G R AL+ L+ E Sbjct: 177 SQDDIVHRMKTIVE-------AESVEIEEQALRLISQIAAGGMRDALSLLDQAISKVEGK 229 Query: 226 DSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAG 285 + + + EI G R I L + + S + AL + +G Sbjct: 230 ------VTLQDIIEITGAVDTRK----------IGTLIQYINQSNIEGALEHFNTCFESG 273 Query: 286 GDPLYVARRCLAIASEDV-------------GNADPRAMQVAIAA 317 +P + + + + G+ DP+ ++A + Sbjct: 274 QEPHFFLEEMMIYLRDILVNRKLGEKATLKKGHNDPQFYEIANSV 318 >UniRef50_A8W2Q1 DNA-directed DNA polymerase n=4 Tax=Bacillus RepID=A8W2Q1_9BACI Length = 600 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 56/330 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +Q L RP+ L +GQ+H+ + L A+ L H+ + GP GTGKT+ A++ Sbjct: 1 MAYQALYRVWRPQVLKDVVGQEHIT---RTLRNALLQQKLSHAYLFSGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 IA+ N + +E +A +GV EIR+ ++ + + Sbjct: 58 IAKAVNCEQAPVEEPCNTCSTCTGIQDGSIVDVIEIDAASNNGVDEIRDIRDKVKFAPSG 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH +A L +E+ + FI ATTE ++ ++SR + + Sbjct: 118 ASYKVYIIDEVHMLTTGAFNALLKTLEEPPRHVIFILATTE--PHKIPLTIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ + + + + +ED D+ + + IA G R AL+ L+ A Sbjct: 176 KRITAHTMIKRMEEIIEDG-------DLAVDPDALSMIARASEGGMRDALSLLDQAISYA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + + + I G S D YD++ AL L R++ Sbjct: 229 DTS------VTLDDVLSIIGAAS------QDLMYDVMEALLD----QQVADGLTAIDRLM 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 + G DP + + + + A+ Sbjct: 273 SDGKDPGRFMEDFIFLTRDLLMVQAAPALD 302 >UniRef50_Q65PK1 DNA polymerase III (Gamma and tau subunits) n=79 Tax=Bacillaceae RepID=Q65PK1_BACLD Length = 566 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 76/412 (18%), Positives = 143/412 (34%), Gaps = 83/412 (20%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+H+ K L A+ H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVFRPQLFEDVVGQEHIT---KTLQNALLQKKFSHAYLFSGPRGTGKTSAAKL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV EIR+ ++ + +A Sbjct: 58 FAKAVNCERAPVSEPCNECSACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ FI ATTE ++ ++SR + + Sbjct: 118 VTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTE--PHKIPLTIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++++ I + + +E + + + D IA +G R AL+ L+ + Sbjct: 176 KRITSQAIVGRMKKIVE-------AEQLKVQDGALDIIASAADGGMRDALSLLDQAVSFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + L + I G S + I L ++ AL ++ Sbjct: 229 GEE------LTVDDALLITGAVSQHY----------IGKLASTLHEKNVSGALETLNELL 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADP----------------RAMQVAIAAWDCFTRVGP 326 G DP + + + + + + I A D + + Sbjct: 273 QQGKDPAKLIEDMIFYFRDMLLYQTAPDLEGVLEKVKVDEEFQTLSRQIPASDLYEMIDI 332 Query: 327 A-----------EGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 A+V L PK+ A A + + Sbjct: 333 LNKSHQEMKWTNHPRIFFEVAVVKLCQGPKAGASAAAQPEVDNLVNKVRQLE 384 >UniRef50_B8FG14 DNA polymerase III, subunits gamma and tau n=2 Tax=Bacteria RepID=B8FG14_DESAA Length = 706 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 78/389 (20%), Positives = 146/389 (37%), Gaps = 86/389 (22%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ LA + RP+ + + Q H+ + L AI + H++ L GP GTGKTT+A + Sbjct: 1 MSYLVLARKYRPQTFDEVVAQPHIT---ETLKNAINQERVAHALCLSGPRGTGKTTVARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N E A + V+++RE E + Sbjct: 58 LAKAMNCVNGPTPEPCGVCASCKEIAASNAVDVFEIDGASNNSVEQVRELRENVQYAPAL 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 G + +DEVH +++ +A L +E+ + FI ATTE S ++ +LSR + Y Sbjct: 118 GNYKVYIIDEVHMLSQAAFNALLKTLEEPPPHVMFILATTE--SHKIPVTILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K +S +DI L + G ++ + +++ A+A G R AL+ L+ + + Sbjct: 176 KRISLDDIVGHLAKLA-------GLENFTIEEQSLWAVARRSGGCMRDALSLLDQVMAYS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + +I G + + AL +++ A L ++ Sbjct: 229 TGEA------SFEKVLDILGVAGRKS----------LFALAQALLDRDVPACLTAVDQLY 272 Query: 283 TAGGDPLYVARRCLAIASED--------------------------VGNADPRAMQVAIA 316 G D V L + V NA P + ++ Sbjct: 273 ARGYDLKQVMADLLDHLRDLTVVKTVRDPGPLLDIPPGEIQAMQEQVANASPAFVNQVLS 332 Query: 317 A---WDCFTRVGPAEGERAIAQAIVYLAC 342 + R+ + A+ A++ + Sbjct: 333 LLFKEEAAVRL-SPQPRLALEVALIRICE 360 >UniRef50_C6CST5 DNA polymerase III, subunits gamma and tau n=4 Tax=Bacillales RepID=C6CST5_PAESJ Length = 590 Score = 334 bits (857), Expect = 5e-90, Method: Composition-based stats. Identities = 76/347 (21%), Positives = 134/347 (38%), Gaps = 56/347 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L RP+ +GQ+H++ L AI + H+ + GP GTGKTT A+V Sbjct: 1 MSHIALYRAWRPQTFQDMVGQRHIIQ---TLQNAIREDRVSHAYLFNGPRGTGKTTAAKV 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A G+ EIR+ ++ R + Sbjct: 58 LAKAVNCERGPAEEPCNECDACRGITAGHIMDVIEIDAASNRGIDEIRDIRDKVRYAPSE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ + FI ATTE +L + ++SR + + Sbjct: 118 VRYKVYIIDEVHMLTSEAFNALLKTLEEPPGHVIFILATTE--PHKLPATIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + +S E+ + L + D + I ++ IA L G R A++ LE +A Sbjct: 176 RQVSLEEQSERLFEICRD-------EGIEAEEDAIAYIARLSEGGMRDAISLLEQVAAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + ++ G +A D+FY AL +++R A + + Sbjct: 228 -----GGSRITLDGAVDVTGGMAA------DQFY----ALAEAIRDRNVAAIMPLVEGLT 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEG 329 AG + + + V D G A+ Sbjct: 273 QAGKSADKCMENLIFYFRDLLVLKLAPQGAVTERVVDAERFRGMADA 319 >UniRef50_B7CCG9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CCG9_9FIRM Length = 587 Score = 333 bits (855), Expect = 8e-90, Method: Composition-based stats. Identities = 68/322 (21%), Positives = 126/322 (39%), Gaps = 55/322 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +Q L + RP N + +GQ H++ L AI + H+ + GP GTGKT++A++ Sbjct: 1 MAYQALYRKYRPSNFDEVVGQTHIIQ---TLKNAIIQNRIAHAYLFCGPRGTGKTSIAKI 57 Query: 70 IARYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ N +E +A +GV E+R I++ + G Sbjct: 58 FAKTLNCTNSQDAPCGVCENCKMAANGSHPDIIEIDAASNNGVDEVRNLIDKVKYAPMQG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + I +DEVH +A L IE+ + FI ATTE ++ ++SR + + Sbjct: 118 KYKIYIIDEVHMMTSGAFNALLKTIEEPPAHVIFIFATTE--PNKVLPTIISRCQRFDFN 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 +S DI+ L+ ++ + I + + IA+L +G R AL+ L+ Sbjct: 176 KVSVNDIKYRLSVVCKN-------EGIEIDQDGLTLIAQLADGGMRDALSILDQCVAYCT 228 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + +I G ++ + I L S+ D + + Sbjct: 229 S------HIDVNDIRKIYGVITS----------EDIGQLFSSIYKKDVDRFIKDIQKYSD 272 Query: 284 AGGDPLYVARRCLAIASEDVGN 305 G D + + + + + Sbjct: 273 MGMDIKRLTADFIHMLKDSLIL 294 >UniRef50_C4ZB56 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridiales RepID=C4ZB56_EUBR3 Length = 523 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 78/428 (18%), Positives = 152/428 (35%), Gaps = 84/428 (19%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L + RP+ GQ+H++ L I+A + H+ + G GTGKTT+A++ Sbjct: 1 MSYQALYRKFRPQEFEDVKGQEHIV---TTLKNQIKADRIGHAYLFCGTRGTGKTTVAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV IR+ E Sbjct: 58 FAKAVNCEHPVDGSPCGECPSCRAITEGSSMNVIEIDAASNNGVDNIRQIREEVTYRPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y Sbjct: 118 GRYKVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S + I L+ ME + + + + R +A+ +G R AL+ L+ Sbjct: 176 HRISIDTIASRLSDLMEQ-------EHVEVEERAIRYVAKAGDGSMRDALSLLDQCIAFH 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 L E + E+ G ++ S L + + A+ +I Sbjct: 229 LG-----EKLTYENVLEVLGAVDT----------EVFSRLLRRILDEDVTGAIRILGELI 273 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRA----MQVAIAAWDCFTR---VGPAEG------ 329 G + + + + ++ + + E Sbjct: 274 DEGRELSQLVNDFTWYMRNLLLLQSSDDMEEVLDISKDNLEALKEEAALVKPETLIRYIR 333 Query: 330 ---------------ERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRN 374 + AI+ L P+ Y + + ++ + +P+ + Sbjct: 334 VFSELSSQVKFASQKRIMVEIAIIKLCR-PQMEKSYDSVLDRINSIEKKLEKGIPIAAQA 392 Query: 375 APTKLMKE 382 A T+ M++ Sbjct: 393 AQTQDMQQ 400 >UniRef50_Q6MH32 DNA polymerase III gamma and tau subunits n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MH32_BDEBA Length = 621 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 75/358 (20%), Positives = 139/358 (38%), Gaps = 67/358 (18%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 ++Q +A + RP++ +GQ H+ L A++ G L H+++ GP GTGKT+ A ++ Sbjct: 18 SYQVIARKWRPQSFTDVVGQNHITQ---TLSNALKNGRLPHALLFTGPRGTGKTSSARIL 74 Query: 71 ARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 A+ +E A +GV IRE + ++G Sbjct: 75 AKALRCPNAQNFVPCNDCYSCNEIAGGSSIDVIEIDGASNNGVDAIRELRDTVAFMPSSG 134 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + I +DEVH + S +A L +E+ + FI ATTE ++ +LSR + + + Sbjct: 135 KYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVVFIMATTE--VHKIPQTILSRCQRFDFR 192 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 +ST I + L + + + DE +A +G R + + L+ + A Sbjct: 193 RISTRSITERLKLICDR-------EGVTADDEALWVVARQGDGSMRDSQSLLDQVITFAN 245 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 L + EI G ++ ++AL A L +I Sbjct: 246 G------PLTRASVVEILGLT------DRALLFETLNALID----RNSQAVLKVIEKIAA 289 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLA 341 AG +P ++ L + + + ++ + + E QA+ +A Sbjct: 290 AGFEPHLYSQDLLEMIR--------NLLLIKVSEAQASQILEMPDSEL---QALSEMA 336 >UniRef50_A8MKQ3 DNA polymerase III, subunits gamma and tau n=2 Tax=Alkaliphilus RepID=A8MKQ3_ALKOO Length = 563 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 75/349 (21%), Positives = 128/349 (36%), Gaps = 65/349 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L R RP+ IGQ ++ L I + ++ H+ + G GTGKT+ A++ Sbjct: 1 MSYKALYRRFRPKVFEDVIGQDQVI---TILKNQISSSNIAHAYLFTGTRGTGKTSTAKI 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 AR N +E +A +GV +RE E + + Sbjct: 58 FARAVNCLSAEDANPCNQCEVCEGILTENIMDVIEIDAASNNGVDNVREIRENVKYPPSK 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ I +DEVH + +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 GKYKIYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTE--PHKIPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K + DI + L ED I +E R IA +G R AL+ LE Sbjct: 176 KPVRINDIMKRLESICEDI-------GIKTEEEALRLIALNSDGALRDALSILEQCISYT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E L + I G + Y+ I L + + L I+ Sbjct: 229 E------DTLTYTNVVNILGMVN----------YEFIFDLVDKIAAKDTSSVLTLINDIL 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGER 331 G D + + ++ ++ +A + E + Sbjct: 273 MEGKDAGILMKDIISHFR---------SILLAKMNVQLDELLTLPEERQ 312 >UniRef50_B9Y576 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y576_9FIRM Length = 613 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 128/318 (40%), Gaps = 55/318 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L RP + + +GQQH++ L A++ + H+ + GP GTGKTT+A++ Sbjct: 1 MSYKALYRTYRPSSFEEVVGQQHIV---TTLKNAVKQNKIAHAYLFCGPRGTGKTTIAKL 57 Query: 70 IARYANAD------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 +A+ N + VE +A +GV E+RE IE+ + G Sbjct: 58 LAKAVNCEDQQNAPCNQCRSCLAIQQGNHPDIVEIDAASNNGVDEVRELIEKVKYAPLEG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH + +A L +E+ + FI ATTE ++ ++SR + Y Sbjct: 118 RYKVYIIDEVHMMSSGAFNALLKTLEEPPSHVIFILATTE--PQKVLPTIISRCQRYDFS 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + +I + +E + I DE R +A+L +G R AL+ ++ A+ Sbjct: 176 KVGQNEIITRVRCVLEQ-------EHIECEDEALRLVAQLADGGMRDALSIMDQCIAYAQ 228 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + EI G + + + + + L + Sbjct: 229 ------NHITAAHVNEIYGITTVSEKI----------EMLQWIFQHQAQSLLEKIRLLNE 272 Query: 284 AGGDPLYVARRCLAIASE 301 G D + + I E Sbjct: 273 KGVDIKRLTSDLIEILKE 290 >UniRef50_P09122 DNA polymerase III subunit gamma/tau n=31 Tax=Bacillales RepID=DPO3X_BACSU Length = 563 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 128/321 (39%), Gaps = 56/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+H+ K L A+ H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVFRPQRFEDVVGQEHIT---KTLQNALLQKKFSHAYLFSGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV EIR+ ++ + +A Sbjct: 58 FAKAVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ FI ATTE ++ ++SR + + Sbjct: 118 VTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHCIFILATTE--PHKIPLTIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++++ I + + ++ + + + + + IA +G R AL+ L+ + Sbjct: 176 KRITSQAIVGRMNKIVD-------AEQLQVEEGSLEIIASAADGGMRDALSLLDQAISFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 +LK E I G S + I L KS+ AL ++ Sbjct: 229 G------DILKVEDALLITGAVSQLY----------IGKLAKSLHDKNVSDALETLNELL 272 Query: 283 TAGGDPLYVARRCLAIASEDV 303 G DP + + + + Sbjct: 273 QQGKDPAKLIEDMIFYFRDML 293 >UniRef50_A8RAJ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RAJ4_9FIRM Length = 593 Score = 330 bits (847), Expect = 7e-89, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 136/345 (39%), Gaps = 57/345 (16%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLA 67 + ++ L RP + + GQ+H++ K L A+E + H+ + GP GTGKT++A Sbjct: 5 CNMGYKALYRTYRPNSFDEVAGQKHIV---KTLQNAVEQNKIAHAYLFCGPRGTGKTSIA 61 Query: 68 EVIARYANAD------------------------VERISAVTSGVKEIREAIERARQNRN 103 ++ A+ N + +E +A +GV+E+R IE+ + Sbjct: 62 KIFAKVINCESKEHKPCLQCDNCLAVQNGSHPDIIEIDAASNNGVEEVRNLIEKVKYAPL 121 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 G+ + +DEVH + +A L IE+ + FI ATTE ++ ++SR + + Sbjct: 122 KGKYKVYIIDEVHMMSAGAFNALLKTIEEPPEHVIFILATTE--PHKVLPTIISRCQRFD 179 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 + +I + +E + I D+ IA+L +G R AL+ L+ Sbjct: 180 FTKVPKNEIVSRIHTILEK-------EHIECDDDVIELIAQLADGGLRDALSILDQCIAY 232 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 A ++ + + EI G + + K + + P + + Sbjct: 233 A------TNHIELQHINEIYGITTVQEKMKLFHH----------IFNNEPVDLMDMLDGM 276 Query: 282 ITAGGDPLYVARRCLAIASEDVG--NADPRAMQVAIAAWDCFTRV 324 + G D + + + E + ++ +++ + Sbjct: 277 LEKGLDIPRLTVDLIELLKESIIFEYTKDSSLLHSLSNEQAVEFI 321 >UniRef50_B9DLF5 DNA polymerase III gamma and tau subunits n=60 Tax=Staphylococcus RepID=B9DLF5_STACT Length = 583 Score = 330 bits (846), Expect = 8e-89, Method: Composition-based stats. Identities = 73/327 (22%), Positives = 122/327 (37%), Gaps = 56/327 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH-LHSMILWGPPGTGKTTLAEV 69 +Q L RP++ +GQ+H+ K L AI G H+ I GP GTGKT++A+V Sbjct: 1 MNYQALYRMYRPQSFDDVVGQEHVT---KTLRNAIAKGKQSHAYIFSGPRGTGKTSIAKV 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A +GV EIR ++ + + Sbjct: 58 FAKAINCPNSVDGEPCNECDICKSITQGSNSDVIEIDAASNNGVDEIRNIRDKVKYAPSQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + + +DEVH +A L +E+ FI ATTE ++ ++SRA+ + Sbjct: 118 SKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTE--PHKIPPTIISRAQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ + I + L E Q I DE IA+ G R AL+ ++ Sbjct: 176 KAIGLDQIIERLRYVAE-------SQHIEYDDEAIAFIAKASEGGMRDALSIMDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L + + G ++AL V A Y + I Sbjct: 228 -----GDEHLTLQDALNVTGSVDEAS----------LNALLNDVANGQVKDAFARYHQFI 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPR 309 G + + + + + N + Sbjct: 273 AEGKEVNRLINDLIYFVRDTIMNKTAQ 299 >UniRef50_Q67TJ5 DNA polymerase III gamma and tau subunits n=1 Tax=Symbiobacterium thermophilum RepID=Q67TJ5_SYMTH Length = 570 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 138/372 (37%), Gaps = 65/372 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 L RP+ + +GQ+H+ + L AI G LH +L GP GTGKTT+A + Sbjct: 1 MAHLALYREYRPQRFGEVVGQEHIT---RTLRNAIVQGRLHHAYLLSGPRGTGKTTVARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A G+ EIR+ ++ Sbjct: 58 LAKAVNCLNPQDGEPCNECEACRRITSGEALDLIEIDAASNRGIDEIRDLRDKVNFAPVE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + + +DEVH + +A L +E+ + F+ ATTE +L +LSR + + Sbjct: 118 LKYKVYIIDEVHMLTEPAFNALLKTLEEPPAHVLFVLATTE--KQKLPITILSRCQAFDY 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + LS ++I L + G Q + E AIA +G R AL+ L+ + A Sbjct: 176 RRLSADEIVARLREVC-------GKQGLKASPEALAAIARHADGGMRDALSLLDQVMAYA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + ++ + G D + AAL W ++ Sbjct: 229 -----AEGEITLDMTLAVLGTAPLDQFLALDGH----------LLRGDVGAALLWLDEMV 273 Query: 283 TAGGDPLYVARRCLAIASEDV---------GNADP-RAMQVAIAAWDCFTRVGPAEGERA 332 AG D + R LA + + P A++ A + F R Sbjct: 274 RAGKDLRQLVRDYLAHLRDLLLVKLEAGAQVLGLPAEALEQMRARAEPFAERQLIRAIRL 333 Query: 333 IAQAIVYLACAP 344 + QA L +P Sbjct: 334 LGQAETELRLSP 345 >UniRef50_C9XIC8 DNA polymerase III subunit gamma/tau n=5 Tax=Clostridium RepID=C9XIC8_CLODC Length = 545 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 126/347 (36%), Gaps = 65/347 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L RP+ IGQ H++ K L I + ++ H+ + G GTGKT+ A++ + Sbjct: 2 HKALYRAYRPQKFEDVIGQDHII---KTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFS 58 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 R N VE +A + V +IRE E + + + Sbjct: 59 RAVNCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH ++ +A L +E+ + FI ATTE ++ + +LSR + Y K Sbjct: 119 YKVYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTE--PHKIPATILSRCQRYDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 ++ +D+ + + ED + I + D+ IA G R AL+ L+ Sbjct: 177 VTVKDMTLRMKKICED-------EGIDIDDKALNLIARNSQGALRDALSILDQCMSF--- 226 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 G+ + + + E+ G + + + L + + +L + Sbjct: 227 ---GESKIDYKDVVELMGSVNI----------EQLFELSQCIVEQDTKKSLEILNEFVLW 273 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGER 331 G D + + + + + E Sbjct: 274 GKDIRNLINDLIDHFRNLMVCKVSSELD---------EIISLPEETI 311 >UniRef50_C3QNI8 DNA polymerase III subunit gamma/tau n=13 Tax=Bacteroidales RepID=C3QNI8_9BACE Length = 621 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 71/331 (21%), Positives = 119/331 (35%), Gaps = 57/331 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 + A + RP +GQ+ L L AI L H+ + GP G GKTT A + Sbjct: 3 NYIVSARKYRPSTFESVVGQRALT---TTLKNAIATQKLAHAYLFCGPRGVGKTTCARIF 59 Query: 71 ARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A + V +IR+ +E+ R Sbjct: 60 AKTINCMTPTADGEACNQCESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQI 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + S +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 120 GKYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTE--KHKILPTILSRCQIYDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S ED L+ + I E IA +G R AL+ + + Sbjct: 178 NRISVEDTVNHLSYVASK-------EGITAEPEALNVIAMKADGGMRDALSIFDQVVSFT 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + K V+ + + Y+ L + AL + I+ Sbjct: 231 GGNITYKSVIDNLNVLD----------------YEYYFRLTDCFLENKVSDALLLFNDIL 274 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D + + + + DP + + Sbjct: 275 NKGFDGSHFITGLSSHFRDLLVGKDPVTLPL 305 >UniRef50_C9L9Q0 DNA polymerase III, gamma and tau subunit n=10 Tax=Bacteria RepID=C9L9Q0_RUMHA Length = 538 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 120/321 (37%), Gaps = 55/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L + RP+ GQ+H++ L I+A + H+ + G GTGKTT+A++ Sbjct: 1 MGYTALYRKFRPQEFEDVKGQEHIV---TTLKNQIKADRIGHAYLFCGTRGTGKTTIAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +AR N + +E +A +GV IRE E Sbjct: 58 LARAVNCEHPVDGSPCNTCKTCRAINEGTSMNVIEIDAASNNGVDNIREIREEVAYRPTT 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y Sbjct: 118 GKYKVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ + I L + M+ + + ++ R IA+ +G R AL+ L+ Sbjct: 176 RRITADTIAARLQELMDK-------EGNDVEEKAIRYIAKAADGSMRDALSLLDQCIAFY 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 L E + E G + S + + + + II Sbjct: 229 LG-----EKLTYEKVLENLGAVDT----------QVFSRMLRQILQQDTAGTIKTLDEII 273 Query: 283 TAGGDPLYVARRCLAIASEDV 303 G + + + Sbjct: 274 IQGRELGQFVTDFIWYLRNLL 294 >UniRef50_C0N3Y5 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3Y5_9GAMM Length = 569 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 85/381 (22%), Positives = 146/381 (38%), Gaps = 81/381 (21%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++ LA + RP++ + +GQQH+L + L ++ LH + G G GKTTLA + Sbjct: 1 MSYLVLARKWRPKSFEEVVGQQHVL---RALINGLDQNRLHHAFLFSGTRGVGKTTLARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + + Sbjct: 58 FAKSLNCEQGVSSTPCGVCQSCTEVDSGRFVDLIEVDAASRTKVDDTRELLDNVQYAPSQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLFATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + L I L +E + I E +A +G R AL+ L+ Sbjct: 176 RRLELTQISDHLRYLLEQ-------ETIKAEPEALEQLARAADGSMRDALSLLDQAIAFG 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + E + ++ G S D+ ++ AL K A L A + Sbjct: 229 GGE------VTSESVFQMLGSIS------QDQLILILDALLK----QDGKALLAQSAELA 272 Query: 283 TAGGDPLYVARRCLAIAS-----------EDVGNADPRAMQVAIAAWDCFTRVGPAEGER 331 G D V L+ E V P+ ++A A +D E + Sbjct: 273 ALGRDFHVVFDFLLSALQQIATLQLVPDLEPVEANSPQLTELA-AQFD-------PETIQ 324 Query: 332 AIAQAIVY----LACA--PKS 346 + Q ++ L+ A PKS Sbjct: 325 LLYQIALHGKRDLSWAADPKS 345 >UniRef50_B1YGC8 DNA polymerase III, subunits gamma and tau n=2 Tax=Exiguobacterium RepID=B1YGC8_EXIS2 Length = 561 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 132/336 (39%), Gaps = 57/336 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +Q L RP+ + +GQ H+ + + A+ + H+ + GP GTGKT+LA++ Sbjct: 1 MAYQALYRVYRPQRFDEVVGQAHIT---RTIQNALMEERMSHAYLFSGPRGTGKTSLAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 IA+ N + E +A +GV EIRE ++ + + Sbjct: 58 IAKAINCEQAPVNEPCNECPTCRAITEGSSPDVFEIDAASNNGVDEIREIRDKVKYPPSE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ FI ATTE ++ + ++SR + + + Sbjct: 118 AAYKVYIIDEVHMLSTGAFNALLKTLEEPPAHAIFILATTE--PHKIPATIISRCQRFDV 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K + + + + + D+T I + R IA +G R AL+ L+ + Sbjct: 176 KRHEVDQLMERMQYILSDQT-------IGYTETALRLIARAADGGMRDALSLLDQAVAFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 D L + + E+ G + + A+ +++ D L ++ Sbjct: 229 NGD------LTDDAVLEVTGAVE----------DEALLAVANALQAHQVDQLLQTLEKMQ 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNA-DPRAMQVAIAA 317 AG D + + + P A+ + A Sbjct: 273 RAGKDLKRFVEDLVFFYRDTLLLKTSPTAVDLLERA 308 >UniRef50_C7GFD5 DNA polymerase III, gamma and tau subunit n=9 Tax=Clostridiales RepID=C7GFD5_9FIRM Length = 526 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 68/330 (20%), Positives = 124/330 (37%), Gaps = 55/330 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L + RP+ GQ+H++ L I+A + H+ + G GTGKTT+A++ Sbjct: 1 MSYTALYRKFRPQEFEDVKGQEHIV---TTLKNQIKADRIGHAYLFCGTRGTGKTTIAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV IR+ E Sbjct: 58 FAKAVNCEHPVDGSPCGECPACRAIAAGNSMNVIEIDAASNNGVDNIRQIREEVEYRPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + +A L +E+ + FI ATTE + ++ +LSR + Y Sbjct: 118 GKYKVYIIDEVHMLSIGAFNALLKTLEEPPSYVIFILATTE--AHKIPITILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + +S E I L + ME + + + + R IA+ +G R AL+ L+ Sbjct: 176 RRISIETISARLMELMEK-------EQVTVEERAIRYIAKAADGSMRDALSLLDQCIAFY 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 D L + + E G ++ S L + + A+ ++ Sbjct: 229 LGQD-----LTYDKVLETLGAVDT----------EIFSRLLRQILEKNVTGAIGVIDEMV 273 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQ 312 G + + M+ Sbjct: 274 IEGRELGQFVNDFTWYLRNLMLVQSSDDME 303 >UniRef50_A8FAE4 DNA-directed DNA polymerase III gamma/tau subunits n=3 Tax=Bacillus RepID=A8FAE4_BACP2 Length = 570 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 126/321 (39%), Gaps = 56/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+H+ K L A+ H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVFRPQVFEDVVGQEHIT---KTLQNALLQKKFSHAYLFSGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV EIR+ ++ + +A Sbjct: 58 FAKAVNCEKSPVSEPCNECDACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ FI ATTE ++ ++SR + + Sbjct: 118 VTYKVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTE--PHKIPLTIISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++T+DI + + ++ + + + + + IA +G R AL+ L+ + Sbjct: 176 KRITTKDIVGRMQKIVD-------AESLNVQEGSLEIIASAADGGMRDALSLLDQAISFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 L + I G S IS L +++ AL ++ Sbjct: 229 G------EQLTIDDALLITGAVS----------QQFISQLAEAIFDQNIAVALDTLNELL 272 Query: 283 TAGGDPLYVARRCLAIASEDV 303 G D + + + + Sbjct: 273 QQGKDAAKLIEDMIFYFRDML 293 >UniRef50_Q1WSU3 DNA polymerase III subunit gamma/tau n=24 Tax=Bacilli RepID=Q1WSU3_LACS1 Length = 579 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 125/321 (38%), Gaps = 56/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAI-EAGHLHSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQ+ + K L AI H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVWRPQRFMDLVGQEMVT---KTLKNAIITHQTSHAYLFTGPRGTGKTSAAKI 57 Query: 70 IARYANADV-------------------------ERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A +GV+EIR+ ++ + Sbjct: 58 FAKAINCRFSKEGEPCNECETCKAITEGRLNDVIEIDAASNNGVEEIRDIRDKVKYAPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ + FI ATTE ++ + ++SR + + Sbjct: 118 ADYKVYIIDEVHMLSTGAFNALLKTLEEPPANVVFILATTE--PHKIPATIISRTQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ E I Q + ++ K ++ D+ + IA+ G R AL+ L+ + Sbjct: 176 KRITAESILQRMIYILDQK-------NVDYDDKALKVIAKAAEGGMRDALSLLDQVISF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + ++ + K V AL +I+ Sbjct: 228 -----GDNNVTLDNALLVTGSVT------QESLFNYL----KFVLSKDTTNALKEIQQIV 272 Query: 283 TAGGDPLYVARRCLAIASEDV 303 G D + + + + Sbjct: 273 EQGKDANRLIEDLINYCRDLL 293 >UniRef50_B1ZQU6 DNA polymerase III, subunits gamma and tau n=3 Tax=Verrucomicrobia RepID=B1ZQU6_OPITP Length = 395 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 79/406 (19%), Positives = 148/406 (36%), Gaps = 75/406 (18%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTL 66 S +Q +A + RP+ +GQ H++ + L AI + H+ + GP GTGKT+ Sbjct: 1 MSSTGYQVIARKWRPQTFDDVVGQDHVV---RTLKNAIARNRIAHAYLFVGPRGTGKTST 57 Query: 67 AEVIARYANA-------------------------DVERISAVTSGVKEIREAIERARQN 101 A + A+ N +E A +GV ++R+ + + Sbjct: 58 ARIFAKALNCTDGPKADFDPNDPACKAIAEGSHLDVIEIDGASNNGVDQVRDLRDTVQYA 117 Query: 102 RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARV 159 GR + +DEVH + + +A L +E+ + F+ ATT+ ++ ++SR + Sbjct: 118 PAQGRYKVYIIDEVHMLSAAAFNALLKTLEEPPGHVKFVFATTD--PQKVLPTIISRCQR 175 Query: 160 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + LK + + I L Q + I + IA + +G R A + L+ M Sbjct: 176 FDLKPIPPDLIIARLKQIA-------ASEKITISAAALECIARMADGGMRDAQSILDQMI 228 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 D + + ++ G SA + I+ L ++ + Sbjct: 229 SFCGTD------ISEADVLDVYGLVSA----------EKIAELAGALAAGDHRKIVAIVD 272 Query: 280 RIITAGGDPLYVARRCLAIASEDVGNA------------DPRAMQVAIAAWDCFT----- 322 T G D + + A + +A +P + D Sbjct: 273 DCDTNGRDLVRLLSDLQAFVRAALLDAIAQGGRSAKLGGEPMTTEQLTRMLDALREGEGA 332 Query: 323 -RVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYD 367 ++G AE + ++ A +S A+ + K A A E P + Sbjct: 333 VKLGLAE-KINFEVTLLKAVDASRSRAIDSLIKELAALAEETPATE 377 >UniRef50_B0N205 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N205_9FIRM Length = 640 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 65/329 (19%), Positives = 129/329 (39%), Gaps = 55/329 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L RP+ + GQ+H++ L AI+ + H+ + GP GTGKTT+A++ Sbjct: 1 MSYKALYRSYRPQTFGEVAGQEHIV---TTLKNAIKENRISHAYLFAGPRGTGKTTVAKL 57 Query: 70 IARYANA-----------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 +A+ N +E +A +GV E+R+ I++ + G+ Sbjct: 58 LAKALNCTGENPPCDQCPNCKAITVGEHPDVIEIDAASNNGVDEVRDLIDKVKYAPINGK 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ I F+ ATTE ++ ++SR + + K Sbjct: 118 YKVYIIDEVHMMSTGAFNALLKTLEEPPAHIVFVLATTE--PHKILPTIISRCQRFDFKK 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + DI L ++ ++ ++A+L G R AL+ LE Sbjct: 176 VENHDIISRLEYVLK-------SENKKYELSALESVAKLAEGGMRDALSILEQCLAY--- 225 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 L E + + G S + IS K + L +++ Sbjct: 226 ----NNELTVESVNMVYGLLSMD---------NKIS-FIKQLLSKDIKGVLTSLDNMLSG 271 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQV 313 D + + + + + + + + + Sbjct: 272 SIDIKRLTFDLVDVLKDIIIYKNTQDVSI 300 >UniRef50_A1RIP8 DNA polymerase III, subunits gamma and tau n=7 Tax=Shewanella RepID=A1RIP8_SHESW Length = 984 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 149/396 (37%), Gaps = 66/396 (16%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKT 64 S ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT Sbjct: 23 TLGSSMSYQVLARKWRPATFEQMVGQSHVLHA---LTNALSQQRLHHAYLFTGTRGVGKT 79 Query: 65 TLAEVIARYANAD-------------------------VERISAVTSGVKEIREAIERAR 99 +LA + A+ N + +E +A + V + RE ++ + Sbjct: 80 SLARLFAKGLNCEQGVTATPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQ 139 Query: 100 QNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRA 157 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR Sbjct: 140 YRPTRGRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRC 197 Query: 158 RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEM 217 + LKSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 198 LQFNLKSLTQDEIGTQLNHILTQ-------EQLPFEVEALTLLAKAANGSMRDALSLTDQ 250 Query: 218 MADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYW 277 G + + + G + + AL K++ + + Sbjct: 251 AIAF------GGGTVMLTQVQTMLGSIDEQH----------VIALLKALTDADITVLMQT 294 Query: 278 YARIITAGGDPLYVARRCLAIASEDVGNADPRA---MQVAIAAWDCFTRVGPAEGERAIA 334 A+++ G D V R L + + A + A F E + Sbjct: 295 SAQVLAYGADAQEVLRSLLELLHQITLTQFAPACAQQSLYSAQIRAFAEQLTPEQVQLYY 354 Query: 335 QAIV----YLACA--PKSNAVYTAFKAALADARERP 364 Q ++ L A PKS + A A+A E+P Sbjct: 355 QILLTGRKDLPHAPDPKSG-LEMALLRAVAFVPEKP 389 >UniRef50_Q8DJU0 DNA polymerase III gamma and tau subunits n=4 Tax=Cyanobacteria RepID=Q8DJU0_THEEB Length = 603 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 137/357 (38%), Gaps = 66/357 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 T++PL + RP+ + +GQ + L +A+ + + + GP GTGKT+ A + Sbjct: 1 MTYEPLHHKYRPQRFSDLVGQGAI---ATTLTQALLKERIAPAYLFCGPRGTGKTSSARI 57 Query: 70 IARYANA---------------------------DVERISAVTSGVKEIREAIERARQNR 102 +A+ N +E +A +GV IRE IE+A+ Sbjct: 58 LAKSLNCLRSSKPTPDPCGQCEVCRQVANGTSLDVIEIDAASHTGVDNIRELIEKAQFAP 117 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVY 160 R + +DE H + S +A L +E+ + FI ATT+ + ++SR + + Sbjct: 118 VQCRYKVYVIDECHMLSVSAFNALLKTLEEPPPQVVFILATTD--PQRVLPTIISRCQRF 175 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 + + ++ L + + I + E +A+L G R A + L+ ++ Sbjct: 176 DFRRIPLGEMVAHLQNIADK-------EQIDIEPEALTLVAQLSQGGLRDAESLLDQLSL 228 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + E + ++ G + + L ++ + L + Sbjct: 229 Y-------PERITVEQVWQLTGAVPEQDLRQ----------LLGAIARRDAVSVLEHTRQ 271 Query: 281 IITAGGDPLYVARRCLAIASEDVGNA-DPRAMQVAIAAWDCFTRVGPAEGERAIAQA 336 ++ G DPL + + ++ + + P+ + + + + A+A+A Sbjct: 272 LLERGRDPLTILQNLASLYRDLLLAKTVPQRRDLVALTAETWQAL------IALAEA 322 >UniRef50_B2J7Q6 DNA polymerase III, subunits gamma and tau n=4 Tax=Nostocaceae RepID=B2J7Q6_NOSP7 Length = 707 Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 137/345 (39%), Gaps = 60/345 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++PL + RP++ A+ +GQ+ + L AI + + + GP GTGKT+ A + Sbjct: 1 MSYEPLHHKYRPKSFAELVGQEAI---ATTLTNAIGTSKIAPAYLFTGPRGTGKTSSARI 57 Query: 70 IARYANA---------------------------DVERISAVTSGVKEIREAIERARQNR 102 +A+ N +E +A +GV IRE IE+A+ Sbjct: 58 LAKSLNCLKSDRPTAEPCGVCDVCQGITKGYALDVIEIDAASNTGVDNIRELIEKAQFAP 117 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVY 160 R + +DE H + +A L +E+ + F+ ATT+ + ++SR + + Sbjct: 118 VQCRYKVYVIDECHMLSTQAFNALLKTLEEPPRHVVFVLATTD--PQRVLPTIISRCQRF 175 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 + + E + + L+ ++I + E +A+L G R A + L+ + Sbjct: 176 DFRRIQLEAMVKHLSAIASK-------ENIHISPEAVTLVAQLSQGGLRDAESLLDQLGL 228 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 +A V+ P+ + ++ G S + L ++ P+A L + Sbjct: 229 LA-------GVVTPDRVWDLVGTVSEQDLLG----------LLNAIAQDKPEAVLDSTHK 271 Query: 281 IITAGGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRV 324 I+ G +PL + A + + P + +T + Sbjct: 272 ILDRGREPLTFLQNLAAFYRDLLIAKTAPNRHDLVACTQQTWTAL 316 >UniRef50_Q2RMH2 DNA polymerase III, subunits gamma and tau n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMH2_MOOTA Length = 589 Score = 327 bits (838), Expect = 6e-88, Method: Composition-based stats. Identities = 70/342 (20%), Positives = 124/342 (36%), Gaps = 56/342 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 +Q L + RP A+ +GQ+H+ + L A+ G L H+ + GP GTGKT+ A+++ Sbjct: 3 QYQALYRQWRPRTFAEVVGQEHIT---RTLRNALRTGRLVHAYLFCGPRGTGKTSTAKIL 59 Query: 71 ARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAG 105 AR N +E +A G+ EIR IE+ G Sbjct: 60 ARAINCLAPREGEPCNECANCRRILAGNSLDVLEMDAASNRGIDEIRNLIEKIPLGPVEG 119 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 R + +DEVH + +A L +E+ FI ATTE ++ +LSR + + Sbjct: 120 RYKVYIIDEVHMLTQEAFNALLKTLEEPPAHAVFILATTE--PRKVLPTILSRCQRFDFH 177 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 L+ + I L + + + ++ G R AL+ L+ + Sbjct: 178 PLTVQAIAGRLQEVA-------AANGVEIEPGALSLLSRKAAGGLRDALSLLDQILASG- 229 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + + G D + AL ++ L + + Sbjct: 230 ----TRGPVTAGQVAVTLGTARL----------DTLLALTDALATGDGAGVLNLVDKALA 275 Query: 284 AGGDPLYVARRCLAIASEDVGNA-DPRAMQVAIAAWDCFTRV 324 +G +P + L + DP A + + +V Sbjct: 276 SGIEPRRLLEDLLDHTRNLLLLKVDPGAGSLTGLLPEEVEQV 317 >UniRef50_B7IDS2 DNA polymerase III, gamma and tau subunit n=1 Tax=Thermosipho africanus TCF52B RepID=B7IDS2_THEAB Length = 480 Score = 327 bits (838), Expect = 7e-88, Method: Composition-based stats. Identities = 74/349 (21%), Positives = 138/349 (39%), Gaps = 56/349 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 Q L + RP+ ++ +GQ H+ +++ G + H+ I GP GTGKTT+A ++A Sbjct: 1 MQALYRKYRPKLFSEVVGQNHV---KTLFLNSLKNGEISHAYIFAGPRGTGKTTVARILA 57 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A G+ EIR+ E + G Sbjct: 58 KSLNCENKNGVEPCNKCNTCQSIDNGSFMDVLEIDAASNRGIDEIRKIRETVGYHAAQGN 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH K +A L +E+ + FI ATT ++ ++SR +V K+ Sbjct: 118 YKVYIIDEVHMLTKEAFNALLKTLEEPPSNVVFILATTN--PEKIPQTIISRCQVIDFKN 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 L+ EDI + L + ++I + E IA+ NG R AL LE ++ + Sbjct: 176 LTIEDIIKRLEFVCKK-------ENINISQEALNEIAKRANGGMRDALTILEQVSKSSSK 228 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 D + E + E G ++I+ + S++ ++ + Sbjct: 229 D------ITIEDVRETLGLVPI----------EVINEMIDSIKIGDIKKTTEIIEKVYFS 272 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAI 333 G DP + L + + D ++ + + +E + + Sbjct: 273 GKDPEVFLMQLLEEMILKIESGDYELIEFLKPLSEILKDIKYSEEKLIL 321 >UniRef50_Q4L3D4 DNA polymerase III gamma and tau subunits n=6 Tax=Bacilli RepID=Q4L3D4_STAHJ Length = 571 Score = 327 bits (838), Expect = 7e-88, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 124/323 (38%), Gaps = 56/323 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGH-LHSMILWGPPGTGKTTLAEV 69 +Q L RP++ +GQ+H+ K L AI G H+ I GP GTGKT++A+V Sbjct: 1 MNYQALYRMFRPQSFQDVVGQEHVT---KTLRNAISKGKQSHAYIFSGPRGTGKTSIAKV 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A +GV EIR ++ + + Sbjct: 58 FAKAINCLNPQDGEPCNECAICKGITQGTNGDVIEIDAASNNGVDEIRNIRDKVKYAPSE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + + +DEVH +A L +E+ FI ATTE ++ ++SRA+ + Sbjct: 118 SKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHAIFILATTE--PHKIPPTIISRAQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ TE I L E+ Q + +E IA+ G R AL+ ++ Sbjct: 176 KAIGTEQITDRLRFVAEE-------QQLDYDNEALEFIAKASEGGMRDALSIMDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L + ++ G ++ L K V A Y + I Sbjct: 228 -----GDEHLTLQDALDVTGSVDEAA----------LNELFKDVIDGNVKNAFTRYHQFI 272 Query: 283 TAGGDPLYVARRCLAIASEDVGN 305 + G + + + + + N Sbjct: 273 SEGKEVNRLINDMIYFVRDTIMN 295 >UniRef50_A3QF53 DNA polymerase III, subunits gamma and tau n=3 Tax=Bacteria RepID=A3QF53_SHELP Length = 1113 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 89/393 (22%), Positives = 154/393 (39%), Gaps = 66/393 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQVVGQSHVLHA---LTNALSQNRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQRLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + + D + +A+ NG R AL+ + Sbjct: 176 KSLTLDEICVQLGHILAQ-------EQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G ++ + + G D + ++ L K++ D + ++ Sbjct: 228 -----GAGQVRLTQVQTMLGTI--------DEHHVIV--LLKALCDGDVDLLMKVTGDVL 272 Query: 283 TAGGDPLYVARRCLAIASED-VGNADPRAMQVAIAAWD--CFTRVGPAEGERAIAQAIV- 338 + G DP V R L + + + P A Q++ A F + E + Q ++ Sbjct: 273 SFGADPHEVLRSLLELLHQITLTQFAPSAAQLSQYAEQIKAFAKQLRPEQVQLYYQLLLN 332 Query: 339 ---YLACA--PKSNAVYTAFKAALADARERPDY 366 L A PKS + A A+A E P Sbjct: 333 GRQDLPHAPDPKSG-LEMALLRAIAFVPEAPVQ 364 >UniRef50_B2A300 DNA polymerase III, subunits gamma and tau n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A300_NATTJ Length = 589 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 78/321 (24%), Positives = 129/321 (40%), Gaps = 54/321 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +Q L + RP+ +GQ+H++ L AI + H+ + GP GTGKT++A+V Sbjct: 1 MDYQALYRQWRPKYFRDLVGQEHVV---TTLKNAISQSRISHAYLFSGPRGTGKTSVAKV 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N D +E +A G+ EIRE + + + Sbjct: 58 FAKALNCDHSQDNEPCGQCSRCIEHDRGTFMDILEIDAASNRGIDEIREIRDHVAYSPSE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G + VDEVH +A L +E+ + FI ATTE +L +LSR + + Sbjct: 118 GNYKVYIVDEVHMLTTEAFNALLKTLEEPPDYVIFILATTE--PHKLPMTVLSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 LST IE+ L ++ +++ E+ IA+ +G R AL+ L+ Sbjct: 176 YRLSTSKIEKQLQNVID-------SKNLSATKESLSIIAKKSDGGMRDALSLLDQSLSFL 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 LK + + E+ G S D FYDL+ AL + L ++ Sbjct: 229 GSG----EQLKVDHVLEVTGTVSE------DTFYDLLMALKE----GDLAQILNIVQQLS 274 Query: 283 TAGGDPLYVARRCLAIASEDV 303 +G D + + + Sbjct: 275 DSGKDFGQFLNDLIVYLRDLL 295 >UniRef50_C0WD56 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WD56_9FIRM Length = 628 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 74/332 (22%), Positives = 134/332 (40%), Gaps = 58/332 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L RP++ +GQ+H+ K L A+E+G + H+ + GP GTGKT+ A + Sbjct: 1 MSYVALYRTWRPQDFDGLVGQEHI---RKALTNALESGRISHAYLFTGPRGTGKTSTARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A G+ EIR+ E+ + Sbjct: 58 LAKALNCEKGPTPHPCNTCDHCREITEGTSADVIEIDAASNRGIDEIRKLREQVHFAPVS 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ + FI ATTE ++ + + SR + + Sbjct: 118 SRYKVYIIDEVHMITADAFNALLKTLEEPPEHVVFILATTE--PQKIPTTIHSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ +DI L + E G +I + R +A +G R A+ L+ + MA Sbjct: 176 RRVTVDDIAAHLQKVAE-------GSNINAEPDALRLMAIQADGGMRDAVGLLDQCSIMA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G D + AL + + AAL +++ Sbjct: 229 N-------PVTAETVRQVLGIAGR----------DTMRALVEKIGRRDLPAALDLLNQLM 271 Query: 283 TAGGDPLYVARRCLAIASEDVGN-ADPRAMQV 313 G D V L + ADP ++ Sbjct: 272 DDGKDVTQVLTELLEYMRALLLYQADPAYQEI 303 >UniRef50_A9KQC7 DNA polymerase III, subunits gamma and tau n=6 Tax=Clostridiales RepID=A9KQC7_CLOPH Length = 522 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 130/351 (37%), Gaps = 64/351 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L + RP+ GQ H++ L I+A + H+ + G GTGKTT+A++ Sbjct: 1 MSYMALYRKFRPDTFEDVKGQDHIV---TTLKNQIKAKRIGHAYLFCGTRGTGKTTVAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A +GV IRE +E + + Sbjct: 58 LAKTVNCEHPIDGNPCNECAMCKAIQSQSSMNVIEIDAASNNGVDNIREIVEEVKYSPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G + +DEVH + +A L +E+ + FI ATTE ++ +LSR + Y Sbjct: 118 GNYKVYIIDEVHMLSAGAFNALLKTLEEPPSYVIFILATTE--VHKIPITILSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ ++I + L E + I ++ R +A +G R AL+ L+ Sbjct: 176 RRVTIDEITKRLRVITEK-------EGIEAEEKALRYVARAADGSFRDALSLLDQCIAFY 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 L + + + G ++ + L + +R + + +I Sbjct: 229 FGQS-----LTYDNVLDALGTVDI----------EVFARLLRYIRKGSVTDCVAILEELI 273 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAI 333 G + + +A + D + + + + Sbjct: 274 IQGRELTQFTIDFTWYLRNLL---------LAKTSEDMEEILEMSSDQLQL 315 >UniRef50_Q31PS7 DNA polymerase III, tau subunit n=4 Tax=Cyanobacteria RepID=Q31PS7_SYNE7 Length = 652 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 65/345 (18%), Positives = 135/345 (39%), Gaps = 60/345 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++PL + RP+ A +GQ+ + + L +A+ + + + GP GTGKT+ A + Sbjct: 1 MAYEPLHHKYRPQCFADLVGQEAI---ARTLSQALAQQRIAPAYLFTGPRGTGKTSSARI 57 Query: 70 IARYANAD---------------------------VERISAVTSGVKEIREAIERARQNR 102 +A+ N +E +A +GV IRE IERA+ Sbjct: 58 LAKSLNCQQSTVPTASPCGECEACRAIARGNALDVIEIDAASNTGVDNIRELIERAQFAP 117 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVY 160 R + +DE H + + +A L +E+ + F+ ATT+ + ++SR + + Sbjct: 118 VQCRFKVYVIDECHMLSTAAFNALLKTLEEPPDRVVFVLATTD--PQRVLPTIISRCQRF 175 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 + + + + L + + I + +A+L G R A + L+ + Sbjct: 176 DFRRIPLQAMTDHLQVIAQK-------ESIEIEPTAIALVAQLAQGGLRDAESLLDQL-- 226 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + PE + ++ G R + L +++ + P+A L + Sbjct: 227 -----GLLPPPVTPEAVWDLLGAVPERQ----------LLQLLEAIAANDPEALLTLIRQ 271 Query: 281 IITAGGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRV 324 ++ G +PL V + A + + + P+ + + + Sbjct: 272 LLDRGREPLTVLQNLTAFSRDLLIARTAPQRRDLTTVTEATWQEL 316 >UniRef50_B7RU95 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RU95_9GAMM Length = 591 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 137/371 (36%), Gaps = 66/371 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 T+Q LA + RP++ + +GQ+H+L A L A++ LH + G G GKTT+A + Sbjct: 1 MTYQVLARKWRPKSFGEMVGQEHVLQA---LINALDHDRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A + V++ RE +E + Sbjct: 58 LAKCLNCEQGVSSHPCGECGSCLEIAEGRSVDLLEVDAASRTKVEDTRELLENVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + S +A L +E+ + F+ ATT+ +L + +LSR + L Sbjct: 118 SRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTD--PQKLPATVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ E I L +E + + + + +G R AL+ + Sbjct: 176 KNMPPEQIVGHLANVLEH-------EMVSFEEPALWLLGRAASGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L + + G F + L + V P L R+ Sbjct: 228 -----GSGKLIETDVRSMLGSVDLSF----------VYQLLEGVAAGDPAELLAIVGRMA 272 Query: 283 TAGGDPLYVARRCLAIA-SEDVGNADPRAMQV----AIAAWDCFTRVGPAEGERAIAQAI 337 D +++ V A P A+ A +G + + Q Sbjct: 273 EHAPDFEGSTDELISMVHRVAVAQAVPDAIDNSWGDADRVAALAQSIGAEDAQL-FYQIA 331 Query: 338 V----YLACAP 344 + +A AP Sbjct: 332 INGKRDMALAP 342 >UniRef50_A3D5Q4 DNA polymerase III, subunits gamma and tau n=38 Tax=cellular organisms RepID=A3D5Q4_SHEB5 Length = 1147 Score = 324 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 88/396 (22%), Positives = 153/396 (38%), Gaps = 66/396 (16%) Query: 6 LDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKT 64 S ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT Sbjct: 23 TLGSSMSYQVLARKWRPATFDQMVGQSHVLHA---LTNALSQQRLHHAYLFTGTRGVGKT 79 Query: 65 TLAEVIARYANAD-------------------------VERISAVTSGVKEIREAIERAR 99 +LA + A+ N + +E +A + V + RE ++ + Sbjct: 80 SLARLFAKGLNCEQGVTATPCGACGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQ 139 Query: 100 QNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRA 157 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR Sbjct: 140 YRPTRGRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRC 197 Query: 158 RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEM 217 + LKSL+ +I L + + E + +A+ NG R AL+ + Sbjct: 198 LQFNLKSLTQGEIGTQLNHILTQ-------EQFPFDAEAIKLLAKAANGSMRDALSLTDQ 250 Query: 218 MADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYW 277 + + + + G + + AL K++ + ++ Sbjct: 251 AIAFGGGN------VMLTQVQTMLGSIDEQH----------VVALLKALTDADIGVLMHT 294 Query: 278 YARIITAGGDPLYVARRCLAIASED-VGNADPRAMQVAI--AAWDCFTRVGPAEGERAIA 334 A+++ G D V R L + + + P A Q ++ A F E + Sbjct: 295 CAQVLAYGADAQEVLRSLLELLHQITLTQFAPAAAQQSLYSAQIRAFAEQLTPEQVQLYY 354 Query: 335 QAIV----YLACA--PKSNAVYTAFKAALADARERP 364 Q ++ L A PKS + A A+A E+P Sbjct: 355 QILLTGRKDLPHAPDPKSG-LEMALLRAVAFVPEKP 389 >UniRef50_B0TAU1 DNA polymerase iii gamma/tau subunit n=2 Tax=Clostridiales RepID=B0TAU1_HELMI Length = 606 Score = 324 bits (832), Expect = 4e-87, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 128/343 (37%), Gaps = 57/343 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L RP++ + +GQ+H+ + L AI + H+ + GP GTGKTT A++ Sbjct: 1 MAYLALYREWRPQSFQELVGQEHV---SRTLQNAIAYQRIAHAYLFCGPRGTGKTTTAKI 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A GV EIRE E+ + Sbjct: 58 LAKALNCSGHGPVRPCNDCLNCRAINTGASHDVLEIDAASNRGVDEIRELREQVKYAPQE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G + +DEVH +A L +E+ + F+ ATTE ++ + +LSR + + Sbjct: 118 GNYKVYIIDEVHMLTTEAFNALLKTLEEPPANVIFVLATTE--VHKIPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + L +I L + +I ET IA G R AL L+ A Sbjct: 176 RRLGVNEIVDRLERICRH-------HEIAASRETLSFIARKAEGGMRDALGILDQCVSYA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + +T I G + + YD+ L + R S L +I Sbjct: 229 GNE------IDSGDVTAILGAVA------DEILYDMTQGLAE-DRLSD---VLMQLNDLI 272 Query: 283 TAGGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRV 324 G + + R L + + P A + D +V Sbjct: 273 NRGKEVRPLTRDLLGHYRDRLILRTVPGAADLVDMPDDIAAKV 315 >UniRef50_C7HNJ4 DNA polymerase III, subunits gamma and tau n=3 Tax=Clostridia RepID=C7HNJ4_9THEO Length = 394 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 56/319 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP++ + +GQ+H++ K L I+ + H+ + G GTGKT++A++ A Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIV---KTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFA 58 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A + V ++RE E + + Sbjct: 59 KAVNCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE +L +LSR + + K Sbjct: 119 YKVYIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTE--PDKLPDTILSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + T I Q L + D I + ++ + IA NG R A++ LE A E Sbjct: 177 IPTRLIAQNLDRICNDS-------GIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEG 229 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 ++ E + E+ G + +++ +L + A+L +I++ Sbjct: 230 ------LITYEDVCEMLGVAN----------DEVLFSLLDYMNAKDVAASLKQLDKILSY 273 Query: 285 GGDPLYVARRCLAIASEDV 303 G D + I + V Sbjct: 274 GIDVGNFLKSLTYILRDMV 292 >UniRef50_B3ERB2 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERB2_AMOA5 Length = 629 Score = 324 bits (831), Expect = 5e-87, Method: Composition-based stats. Identities = 78/343 (22%), Positives = 133/343 (38%), Gaps = 57/343 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP + +GQ H+ L AI HL H+ + GP G GKTT A ++A Sbjct: 4 FVVSARKYRPSVFSHVLGQAHIT---TTLKNAIRTNHLAHAFLFCGPRGVGKTTCARILA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N E +A + V+++R +++ R G Sbjct: 61 KAINCQQLTADIEPCNACDSCKSFNQRTSFNIYELDAASNNSVEDVRSLVDQVRYPPQNG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 I +DEVH +++ +AFL +E+ FI ATTE ++ +LSR +++ + Sbjct: 121 AYKIYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTE--KHKVLPTILSRCQIFDFQ 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + EDI Q L E + I +E I+ +G R AL+ +++ Sbjct: 179 RIKPEDIVQQLKNVSEQ-------EHIPYDEEALHLISLKADGALRDALSMFDVIVSFGA 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + L+ + + Y L +++ + A L Y II Sbjct: 232 GKLTYEATLENLHILD----------------YSCYFKLTEAILQNDIKACLLIYDEIIQ 275 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGP 326 +G D LY +A + DP+ + + A R G Sbjct: 276 SGFDGLYFLEGLVAHFRSLLVAQDPQTLPLLEVAPSIQERYGM 318 >UniRef50_A6LDQ5 DNA polymerase III subunit gamma/tau n=19 Tax=Bacteroidales RepID=A6LDQ5_PARD8 Length = 586 Score = 324 bits (830), Expect = 5e-87, Method: Composition-based stats. Identities = 65/331 (19%), Positives = 119/331 (35%), Gaps = 57/331 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 + A + RP +GQ+ L L AI++ L H+ + GP G GKT+ A + Sbjct: 3 NYIVSARKYRPSTFRSVVGQKSLT---TTLKNAIQSNKLAHAYLFCGPRGVGKTSCARIF 59 Query: 71 ARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A + V +IR I++ R Sbjct: 60 AKTINCLNPTADGEACNACESCRAFNEQRSYNIHELDAASNNSVDDIRTLIDQVRIPPPI 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 120 GKYKVFIIDEVHMLTTAAFNAFLKTLEEPPHHALFILATTE--KHKVLPTILSRCQIYDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S D+ + L + + E IA+ +G R AL+ + + Sbjct: 178 SRISIADMVEHLQYV-------SSQEGVTAEPEALNVIAQKADGGMRDALSIFDQVVSFT 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + + V+ + + Y+ L ++ A+L I+ Sbjct: 231 NGNITYQAVIDNLNVLD----------------YEYYFRLTDAILSGNVRASLLILNEIL 274 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D + + + D + + Sbjct: 275 GKGFDGQNIITGLAGHFRDLLVCRDESTLVL 305 >UniRef50_C6ITP2 DNA polymerase III subunit gamma/tau n=10 Tax=Bacteroidales RepID=C6ITP2_9BACE Length = 619 Score = 324 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 69/331 (20%), Positives = 121/331 (36%), Gaps = 57/331 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 + A + RP +GQ+ L L AI L H+ + GP G GKTT A + Sbjct: 3 NYIVSARKYRPSTFESVVGQRALT---TTLKNAIATQKLAHAYLFCGPRGVGKTTCARIF 59 Query: 71 ARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A + V +IR+ +E+ R Sbjct: 60 AKTINCMTPTTDGEACNECESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQI 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + S +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 120 GKYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTE--KHKILPTILSRCQIYDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S ED L+ ++I E IA +G R AL+ + + Sbjct: 178 NRISVEDTVNHLSYVAAK-------ENITAEPEALNVIAMKADGGMRDALSIFDQVVSFT 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + K V++ + + Y+ L + AL + ++ Sbjct: 231 GGNITYKSVIENLNVLD----------------YEYYFRLTDCFLENRVSDALLLFNDVL 274 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D + + + + + D + + Sbjct: 275 NKGFDGSHFITGLSSHCRDLLVSKDAATLPL 305 >UniRef50_B3JMX9 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JMX9_9BACE Length = 623 Score = 323 bits (828), Expect = 9e-87, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 121/331 (36%), Gaps = 57/331 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 + A + RP +GQ+ L L AI L H+ + GP G GKTT A + Sbjct: 3 NYIVSARKYRPATFDTVVGQRALT---TTLKNAIANQKLAHAYLFCGPRGVGKTTCARIF 59 Query: 71 ARYANADV--------------------------ERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A + V++IR IE+ R Sbjct: 60 AKTINCLHPTADGEACNECESCRAFNEQRSYNIHELDAASNNSVEDIRSLIEQVRIPPQI 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH +++ +AFL +E+ FI ATTE ++ +LSR ++Y Sbjct: 120 GKYKVYIIDEVHMLSQAAFNAFLKTLEEPPHHAIFILATTE--KHKILPTILSRCQIYDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S D + L + I E IA+ +G R AL+ + + Sbjct: 178 NRISVNDTVEHLENVARK-------EHIEAEPEALNVIAQKADGGMRDALSIFDQVVSFT 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + V++ + + Y+ L + + L + ++ Sbjct: 231 NGHITYQSVIENLNVLD----------------YEYYFKLTDAFLENRVSDCLLTFNEVL 274 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D + + + + + D +Q+ Sbjct: 275 KKGFDGNHFITGLTSHFRDLLVSRDDETLQL 305 >UniRef50_A1U128 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=4 Tax=Gammaproteobacteria RepID=A1U128_MARAV Length = 637 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 134/362 (37%), Gaps = 64/362 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP +GQ+H+L A L A+E LH + G G GKTT+ + Sbjct: 1 MSYQVLARKWRPRTFEDMVGQEHVLQA---LIHALEHQRLHHAYLFTGTRGVGKTTIGRL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +AR N + +E +A +GV ++RE + + Sbjct: 58 LARCLNCETGITPNPCGECDSCKEILENRFVDLIEIDAASRTGVDDMRELTDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +AFL +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLTNQSFNAFLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ E I L + + + I D +A +G R AL+ + Sbjct: 176 KRMTPEHIVGHLKHVLTE-------EQIPFEDPALWLLARAADGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L ++ + G R I + ++ L RI Sbjct: 228 -----GNENLAASDVSNMLGTIDQRD----------IQRIVNALVERDGPGLLSEINRIS 272 Query: 283 TAGGDPLYVARRCLAIAS----EDV--GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQA 336 D + L++ E V G+AD AM A + R+ + + Q Sbjct: 273 DFAPDYGVILSDMLSLFHRVTMEQVVPGSAD-NAMGDAAQVQELARRLSAEDAQL-FYQT 330 Query: 337 IV 338 + Sbjct: 331 AL 332 >UniRef50_C4Z4W2 DNA polymerase n=3 Tax=Clostridiales RepID=C4Z4W2_EUBE2 Length = 561 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 124/321 (38%), Gaps = 55/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L + RP+N GQ ++ L I A + H+ + G GTGKT++A++ Sbjct: 17 MSYQALYRKWRPDNFNDVKGQDTIV---TTLRNQINADRIGHAYLFCGTRGTGKTSVAKI 73 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV IR+ E + + Sbjct: 74 FAKAVNCEHPVDGNPCGECPTCKAIAAGTSMNVIEIDAASNNGVDNIRQIREEVQYSPTE 133 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + +A L +E+ + FI ATTE ++ +LSR + Y Sbjct: 134 GRFKVYIIDEVHMLSIGAFNALLKTLEEPPAYVIFILATTEVA--KIPITILSRCQRYDF 191 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++ E I L++ M+ + + + D+ + +A+ +G R AL+ L+ Sbjct: 192 HRITIETIAGRLSELMK-------AEGLNVEDKAIKYVAKAADGSMRDALSLLDQCLAFY 244 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 D LK E + ++ G + S + ++ + +I Sbjct: 245 LGKD-----LKYENVLDVLGAVDTA----------VFSKMLSTILSGDVAVCMSLMEDLI 289 Query: 283 TAGGDPLYVARRCLAIASEDV 303 G D + + Sbjct: 290 MQGRDLSQFVTDFIWYLRNLL 310 >UniRef50_B8HBY1 DNA polymerase III, subunits gamma and tau n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HBY1_ARTCA Length = 1202 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 81/391 (20%), Positives = 130/391 (33%), Gaps = 72/391 (18%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L R RP++ A IGQ+H+ L A+ + H+ + GP G GKTT A ++AR Sbjct: 6 ALYRRYRPDSFADVIGQEHVTGP---LMTALRKNRVNHAYLFSGPRGCGKTTSARILARC 62 Query: 74 ANA---------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 N +E +A GV + R+ ERA R Sbjct: 63 LNCAEGPTDTPCGVCPSCVELARGGSGSLDVIEIDAASHGGVDDARDLRERATYAPVRDR 122 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DE H + +A L +E+ I FI ATTE ++ + SR Y + Sbjct: 123 YKIFIIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTE--PDKVIGTIRSRTHHYPFRL 180 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + E + L +++ + + G R +L+ L+ + A Sbjct: 181 VPPEPLMAYLELLCNQ-------ENVPVAPGVLSLVIRAGGGSVRDSLSVLDQLMAGA-- 231 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 G L EL + G L+ + ++V S R+I Sbjct: 232 ---GPNGLDYELAVALLGYT----------HASLLDDVVEAVAASDAATVFRAVDRVIQT 278 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRV--GPAEGERA-IAQAIVYLA 341 G DP L + + + A + + G + A + L Sbjct: 279 GHDPRRFVEDLLERFRDLI---------IVQAMPESAQVILRGMPADQIARLQNQAHNLG 329 Query: 342 CAPKSNAVYTAFKAALADARERPDYDVPVHL 372 A S A AL + +HL Sbjct: 330 AAELSRAADVT-NTALTEMTGATSPR--LHL 357 >UniRef50_C9LV54 DNA polymerase III, gamma and tau subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LV54_9FIRM Length = 691 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 80/394 (20%), Positives = 141/394 (35%), Gaps = 83/394 (21%) Query: 4 LSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTG 62 + D + L + RP + +GQ + + L AI AG + H+ + GP GTG Sbjct: 21 MRSRRDDMAYIALYRQWRPGSFKDLVGQTAV---SRTLSHAISAGRIAHAYLFSGPRGTG 77 Query: 63 KTTLAEVIARYANAD-------------------------VERISAVTSGVKEIREAIER 97 KT+ A+++A+ N + E +A G+ E+R+ E+ Sbjct: 78 KTSTAKILAKSLNCEKGPTPEPCGVCKNCTKIADGTALDVFEIDAASNRGIDEMRDLREK 137 Query: 98 ARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLS 155 + GR + +DEVH +A L +E+ + FI ATTE ++ + + S Sbjct: 138 VKFTPAEGRYKVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTE--PHKVPATIQS 195 Query: 156 RARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTL 215 R + + + ++ E+IE L ++ I E R IA +G R AL+ L Sbjct: 196 RCQRFDFRRITVEEIEARLAYVAQEM-------KIPCEKEALRLIARQADGGMRDALSLL 248 Query: 216 EMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAAL 275 + A + L + E G ++ I L K++ A L Sbjct: 249 DQCASL------DGDTLTAACVEENLGLIG----------HEPIYRLTKAIGERAKGEVL 292 Query: 276 YWYARIITAGGDPLYVARRCLAIAS-----------------EDVGNA-------DPRAM 311 A ++ G DP+ + +D G A +A Sbjct: 293 ETIAELLALGKDPMQLLAELTIHLRSLMIYEAAGALAALNLADDTGAALEEQKALFTQAQ 352 Query: 312 QVAIAA---WDCFTRVGPAEGERAIAQAIVYLAC 342 +A+ A + + A++ L Sbjct: 353 IMAMIARLHEAMAELRWTPQPRITLEVALLSLCR 386 >UniRef50_B2GFF0 DNA polymerase III gamma/tau subunit n=52 Tax=cellular organisms RepID=B2GFF0_KOCRD Length = 1264 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 78/391 (19%), Positives = 129/391 (32%), Gaps = 72/391 (18%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L R RPE IGQ+H+ +PL A+ + H+ + GP G GKTT A ++AR Sbjct: 4 ALYRRYRPETFEDVIGQEHVT---EPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARC 60 Query: 74 ANA---------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 N +E +A GV R+ ERA R Sbjct: 61 LNCAEGPTATPCGRCESCRDLARDGAGSLDVIEMDAASHGGVDHARDLRERATFAPVRDR 120 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DE H + +A L +E+ + FI ATTE ++ + + SR Y + Sbjct: 121 YKIFIIDEAHMVTREGFNALLKIVEEPPEHVKFIFATTE--PSKVLTTIRSRTHHYPFRL 178 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + E + + L Q ++ + + + G R +L+ L+ + Sbjct: 179 VPPEPLMRYLEQLCQE-------EGVSTEPGVLSLVVRAGGGSVRDSLSVLDQLMA---- 227 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 S +R + +L + G L+ + + R++ Sbjct: 228 -GSDERGISYDLAVALLGYT----------HAALLDDVVDAFAAGDAATVFSSVDRVVQT 276 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRV--GPAEGERA-IAQAIVYLA 341 G DP L + V V A D + G + + L Sbjct: 277 GQDPRRFVEDLLERFRDLV---------VVNAVPDSAANILHGMPTDQINRLRNQATQLG 327 Query: 342 CAPKSNAVYTAFKAALADARERPDYDVPVHL 372 A S + AL + +HL Sbjct: 328 AAELSRSADIT-NEALNEMTGATSPQ--LHL 355 >UniRef50_C7Q5N1 DNA polymerase III, subunits gamma and tau n=2 Tax=Actinomycetales RepID=C7Q5N1_CATAD Length = 863 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 71/346 (20%), Positives = 124/346 (35%), Gaps = 63/346 (18%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L R RPE + +GQ+H+ L +A+ G + H+ + GP G GKTT A ++AR Sbjct: 21 ALYRRYRPETFEEVVGQEHVTLP---LQQALRNGRVNHAYLFSGPRGCGKTTSARILARC 77 Query: 74 ANAD---------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 N + +E +A GV + R+ ERA A R Sbjct: 78 LNCEQGPTPTPCGTCRSCVELANGGSGSIDVIEIDAASHGGVDDARDLRERAFFAPAASR 137 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DE H + +A L +E+ + FI ATTE ++ + SR Y + Sbjct: 138 FKIYIIDEAHMVTSAGFNALLKVVEEPPPHLKFIFATTE--PEKVIGTIRSRTHHYPFRL 195 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + + + L + I + E + G AR A++ L+ + A+ Sbjct: 196 IPPGVLREHLNDI-------TAREGIKVEPEVLPLVVRAGAGSARDAMSVLDQLLAGADE 248 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + + T + G A L+ L ++ G+ A +++ + Sbjct: 249 NG-----VTYAMATGLLGYTDAA----------LLDRLVEAFAGNDGAAVFGLVDQVVES 293 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGE 330 G DP L + V A + + + Sbjct: 294 GHDPRRFLTDLLERFRDLVVLNA------VTDAGAARALIDVPDDQ 333 >UniRef50_Q21L32 DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit n=8 Tax=Gammaproteobacteria RepID=Q21L32_SACD2 Length = 690 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 76/395 (19%), Positives = 142/395 (35%), Gaps = 64/395 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP + IGQ+H+L + L A++ G LH + G G GKT++A + Sbjct: 1 MSYQVLARKWRPRTFREMIGQEHVL---RALINALDHGRLHHAYLFTGTRGVGKTSIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A + V++ RE ++ + Sbjct: 58 LAKCLNCETGVSSEPCGECSACVEISEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR I +DEVH + +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKIYLIDEVHMLSNHSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++S E I L+ +E + I + +A +G R AL+ + Sbjct: 176 KNMSPERIVGHLSHILEK-------EVIPFEESALWQLARSADGSMRDALSLTDQSISFG 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + + + G +L+ AL L A+ Sbjct: 229 GGK------VSEDEVASMLGTI------DHKLVQNLVGALI----AGDGSQILTSVAKFA 272 Query: 283 TAGGDPLYVARRCLAIA-SEDVGNADPRAMQVAIAAW-DCFTRVG--PAEGERAIAQAIV 338 D + + + A P A+ + E + Q + Sbjct: 273 EHAPDFDVALADLITLLHRIAIAQALPDALDNSYGDRTQILEFASKLAPEDVQLFYQTAL 332 Query: 339 ----YLACAPKSNAVYTAFKAALADARERPDYDVP 369 L+ +P + + + + + DVP Sbjct: 333 IGRRDLSLSPDPRSGFEMTLLRMLAFKPQGVADVP 367 >UniRef50_A7HJR0 DNA polymerase III, subunits gamma and tau n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HJR0_FERNB Length = 517 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 81/381 (21%), Positives = 148/381 (38%), Gaps = 60/381 (15%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+N +GQ+H+ K L A++ + H+ I GP GTGKTT A ++A Sbjct: 1 MEALYRKYRPKNFYDIVGQEHI---KKLLTNALKLQKINHAYIFAGPRGTGKTTTARILA 57 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + +E +A G+ EIR+ E G+ Sbjct: 58 KSLNCEKNQFGEPCNECTSCQAIDNGSHLDVIELDAASNRGIDEIRKIKEGVNFTPVMGK 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ I FI ATT ++ ++SR V ++ Sbjct: 118 YKVYIIDEVHMLTREAFNALLKTLEEPPQHIVFILATTN--PEKIPPTIMSRCHVLEFRN 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +S E+I L E + + E + IA+ G R AL+TLE + Sbjct: 176 ISEENIISKLKSVCEK-------EGFDVTYEALKKIAKRAEGGLRDALSTLEQVIRYTGG 228 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + +++ E G S + I ++ + + I Sbjct: 229 E------VTEKIVDEALGLISE----------ETIEKFIEATLNNDRELIEKILNDIYIE 272 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAP 344 GD + + E +++A ++ + AE + IA+ +++L+ A Sbjct: 273 RGDFDTFINQLIEKTLEKKE---DNMLKLASDFYNVLKEIRFAEEKLLIAR-LMFLSIAN 328 Query: 345 KSNAVYTAFKAALADARERPD 365 + + Y+ + AR D Sbjct: 329 RYHGKYSNISNVASTARSSQD 349 >UniRef50_B4WR18 DNA polymerase III, subunits gamma and tau, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WR18_9SYNE Length = 745 Score = 321 bits (824), Expect = 3e-86, Method: Composition-based stats. Identities = 71/377 (18%), Positives = 141/377 (37%), Gaps = 69/377 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ +Q +GQ + + L A+E + + + GP GTGKT+ A ++A Sbjct: 2 YEPLHHKYRPQTFSQLVGQDAI---AQTLTHALEQKRIAPAYLFCGPRGTGKTSSARILA 58 Query: 72 RYANA---------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 + N VE +A +GV IRE IER++ Sbjct: 59 KSLNCLSSEVPTAQPCGQCDVCQAVIQGIALDVVEIDAASNTGVDNIRELIERSQFAPVQ 118 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + + +A L +E+ + F+ ATT+ + ++SR + + Sbjct: 119 CRYKLYVLDEVHMLSTAAFNALLKTLEEPPSRVVFVLATTD--PQRVLPTIISRCQRFDF 176 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + + + L+ + I + + +A++ G R A + L+ ++ A Sbjct: 177 RRIPLPSMIKHLSYI-------SAEEAIQIEPSAIQLVAQISQGGLRDAESLLDQLSLQA 229 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G R L +++ A L ++ Sbjct: 230 N-------KITVETVWDLVGAVPERDLLN----------LVRAIAADDSTALLERVRHLM 272 Query: 283 TAGGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQ---AIV 338 G +PL V + + + + P+ + + + + AQ A Sbjct: 273 DKGREPLIVLQSLVGFYRDLLIAKRAPKRVDLVAITSPTWAEM------IPFAQKLSAAA 326 Query: 339 YLACAPKSNAVYTAFKA 355 LA K + K Sbjct: 327 LLASQQKLQSAEVQIKN 343 >UniRef50_A7VUJ6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUJ6_9CLOT Length = 564 Score = 321 bits (824), Expect = 3e-86, Method: Composition-based stats. Identities = 84/413 (20%), Positives = 147/413 (35%), Gaps = 86/413 (20%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP+ + +GQ + L ++AG + H+ + G GTGKTT A+++A Sbjct: 5 YQVLYRKWRPQVFSDVVGQPQVTV---TLQNELKAGRIAHAYLFTGSRGTGKTTCAKILA 61 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 + N VE +A +GV+ IR E A A + Sbjct: 62 KAVNCLSLKEGDPCGECESCVGIDNGSVMDVVEIDAASNNGVENIRNLREEASFTPAAAK 121 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE +L + +LSR + + Sbjct: 122 YRVYIIDEVHMLSIGAFNALLKTLEEPPAHVVFILATTE--VHKLPATILSRCQRFDFHR 179 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + E I L G ++ L E IA + +G R AL+ L+ + Sbjct: 180 IDPEVIADRLQFVA-------GEENAHLEREAALLIARIADGGMRDALSLLDQCMGRSSE 232 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + E+++E AG D + +L +V AL + A Sbjct: 233 -------ITLEVVSETAGLAGR----------DHLFSLADTVLRQNGGQALEQIDELHKA 275 Query: 285 GGDPLYVARRCLAIASEDVGN---ADPRAMQVAIA--------AWDCFTRVGPAEG---- 329 D + + + +P+ + V + FT G Sbjct: 276 SKDMVRLCEELAGHFRNLMLLKTMKNPQNLIVVSQDEYQKLQVQAEAFTLAGTIHAIDVL 335 Query: 330 -------------ERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVP 369 + A++ L +P+ + A LA ++P +P Sbjct: 336 QAAKERMFRGFDRRVELEMALLKLC-SPELDESVDAILRRLARLEKQPRAVIP 387 >UniRef50_B0K0Z9 DNA polymerase III, subunits gamma and tau n=9 Tax=Thermoanaerobacter RepID=B0K0Z9_THEPX Length = 518 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 131/319 (41%), Gaps = 56/319 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP++ + +GQ+H++ K L I+ + H+ + G GTGKT++A++ A Sbjct: 2 YQSLYRKYRPKSFKEVVGQEHIV---KTLKNQIKLNKIGHAYLFTGTRGTGKTSVAKIFA 58 Query: 72 RYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A + V ++RE E + + Sbjct: 59 KAVNCLNNTDGEPCNSCEICQAINNNTTMDVLEIDAASNNSVNDVRELRESVIYAPSQAK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + +A L +E+ + FI ATTE +L +LSR + + K Sbjct: 119 YKVYIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTE--PDKLPDTILSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + T I Q L + D I + ++ + IA NG R A++ LE A E Sbjct: 177 IPTRLIAQNLDRICNDS-------GIKIEEKGLKTIAIYGNGSMRDAISLLEQCASYKEG 229 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 ++ E + E+ G + +++ +L + A+L +I++ Sbjct: 230 ------LITYEDVCEMLGVAN----------DEVLFSLLDYMNAKDVAASLKQLDKILSY 273 Query: 285 GGDPLYVARRCLAIASEDV 303 G D + I + V Sbjct: 274 GIDVGNFLKSLTYILRDMV 292 >UniRef50_A9NE33 DNA polymerase III, gamma and tau subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE33_ACHLI Length = 564 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 132/319 (41%), Gaps = 56/319 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L RP+ GQ+ ++ L A+ + H+ I GP GTGKT++A++ Sbjct: 1 MSYVALYRTYRPKFFKDVFGQKVIVQ---TLQNALLNEKIGHAYIFSGPRGTGKTSVAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A +GV EIR+ ++ + + Sbjct: 58 VAKALNCLEAPAKEPCGKCDVCLGVDRGDVPDIIEIDAASNNGVDEIRDLRDKVKYAPSI 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH + +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 GKYKVYIIDEVHMLTTAAFNALLKTLEEPPKYVVFILATTE--PHKVPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ + IE+ L Q + +++ + E AIA G R AL+ L+ + Sbjct: 176 KNIEMDQIEENLKQIINK-------ENLKITPEALTAIARTAEGGMRDALSLLDQVVSFT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + E + ++G S R+ I+ L K + P AL +II Sbjct: 229 NDE------ITEEDIYTVSGGLSRRY----------INELLKVIYLKQPQKALDLLNQII 272 Query: 283 TAGGDPLYVARRCLAIASE 301 G D + + + Sbjct: 273 KDGKDIARMVSDIILALRD 291 >UniRef50_UPI0001C334AE DNA polymerase III, subunit gamma/tau n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C334AE Length = 726 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 147/343 (42%), Gaps = 60/343 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 ++PL + RP+ +GQ+ ++ L AI + + H+ + GP GTGKT+ A + A Sbjct: 4 YEPLYQKYRPQTFDGLVGQKSIVL---TLSNAIRSQRISHAYLFTGPRGTGKTSTARIFA 60 Query: 72 RYANA---------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 + N +E +A +GV IRE IE+A+ Sbjct: 61 KSINCLASDAPSISPCGNCEACQTINKGSSLDVIEIDAASNTGVDNIREIIEQAKFAPMQ 120 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R I VDE H + + +A L +E+ + FI ATT+ + ++SR + + Sbjct: 121 LRYKIYIVDECHMLSTAAFNALLKILEEPPKHVIFILATTD--PQRVLPTIISRCQRFDY 178 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++ E+I Q L + ++ ++I + + +A++ NG R A + L+ ++ Sbjct: 179 RRIAIEEIVQHLGKIAKE-------ENINIEIDALNLVAKISNGGLRDAESLLDQLSLFT 231 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G S R DL+S L +++R + + + ++I Sbjct: 232 -------GKINSEKVNDLVGLISER---------DLLS-LLQAIRSNNSKLIIEFCGQLI 274 Query: 283 TAGGDPLYVARRCLA-IASEDVGNADPRAMQVAIAAWDCFTRV 324 G +PL + + + + P+ ++ + + D + + Sbjct: 275 NKGKEPLTILQNIANFHLNLLISKVSPQCPELTMISKDIWKEL 317 >UniRef50_Q48KQ6 DNA polymerase III, subunits gamma and tau n=17 Tax=Pseudomonadaceae RepID=Q48KQ6_PSE14 Length = 737 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 135/347 (38%), Gaps = 64/347 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP + + +GQ H+L K L A+++ LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPRSFREMVGQAHVL---KALINALDSQRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 IA+ N + +E +A + V++ RE ++ + + Sbjct: 58 IAKCLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + +A L +E+ + FI ATT+ +L + +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTD--PQKLPATILSRCLQFSL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K+++ E + + LT + G +++ D+ + +G R A++ + Sbjct: 176 KNMTPERVVEHLTHVL-------GVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G+ + + + G + +D+++AL + L + Sbjct: 228 -----GEGKVMAADVRAMLGT------LDHGQVFDVLTALLE----GDARGVLEAVRHLA 272 Query: 283 TAGGDPLYVARRCLAIA-SEDVGNADPR-------AMQVAIAAWDCF 321 G D V L + + A P +A Sbjct: 273 EQGPDWNGVLSEILNVLHRVAIAQALPEGVDNGHGDRDRVLALAQAL 319 >UniRef50_B5YCC7 DNA polymerase III subunit gamma/tau n=2 Tax=Dictyoglomus RepID=B5YCC7_DICT6 Length = 521 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 71/340 (20%), Positives = 132/340 (38%), Gaps = 57/340 (16%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIAR 72 L + RP+ + +GQ+H++ L ++ H+ H+ + GP GTGKTT+A ++A+ Sbjct: 3 IALYRKWRPQTFEEVVGQEHIVI---TLQNSLRYNHIGHAYLFAGPRGTGKTTIARILAK 59 Query: 73 YANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRR 107 N +E +A G+ EIR+ E+AR R Sbjct: 60 ALNCVQGPTPTPCLKCESCVEIAEGRSIDVIEIDAASNRGIDEIRDIREKARLLPVRDRY 119 Query: 108 TILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DEVH +A L +E+ + FI ATTE ++ +LSR + + + L Sbjct: 120 KVYIIDEVHMLTNEAFNALLKILEEPPEHVVFIMATTE--PQKVPLTILSRCQRFDFRRL 177 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 + +++ + L + E + + + R IA G R A++ LE + ++ + Sbjct: 178 TRDEVIKQLAKIAEK-------EGAKISEGALRLIAIQSQGSMRDAISLLEQLLVYSDQE 230 Query: 226 DSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAG 285 + EL + G + Y+ K++ +I G Sbjct: 231 ------ITEELARNLLGLPT----------YEFTYNFAKALGEYNILEGYSLLQQIFQMG 274 Query: 286 GDPLYVARRCLAIASEDVGN-ADPRAMQVAIAAWDCFTRV 324 +P A+ L + AD R + + F + Sbjct: 275 KNPQQFAKELLQHFRNLLLLKADERIGNLLSLTQEEFEEL 314 >UniRef50_C4V121 DNA polymerase III, subunits gamma and tau n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V121_9FIRM Length = 615 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 71/342 (20%), Positives = 125/342 (36%), Gaps = 56/342 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L R RPE A +GQ+H+ + L RA+ +G + H+ + GP GTGKT+ A++ Sbjct: 1 MAYVALYRRWRPERFADLVGQEHI---SRTLSRAVTSGQISHAYLFTGPRGTGKTSTAKI 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 +AR N E +A G+ EIR+ E + Sbjct: 58 LARALNCAEGPTLTPCGHCDSCRSISDGSSMDVFEIDAASNRGIDEIRDLRESVKFAPTE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G I +DEVH +A L +E+ + FI ATTE ++ + + SR + Y Sbjct: 118 GLYKIYIIDEVHMLTTEAFNALLKTLEEPPERVIFILATTE--PHKVPATIQSRCQRYDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++ +I L ++ I ++ IA +G R AL+ L+ +A Sbjct: 176 HRITVTEICDRLIYVCKES-------GIEAEEDALGIIAVQADGGMRDALSILDQCTALA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E L E + E G + I + + + A + ++++ Sbjct: 229 EGT------LTAERVQEALGLVGRAW----------IRQMAEQIAARDAAALITQLSQLL 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRV 324 G + V + + A ++ Sbjct: 273 QNGRELRQVLVELAQYFRSLMIAGVGGTISAAELCAGDAEQL 314 >UniRef50_UPI000196BAD9 hypothetical protein CATMIT_00797 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAD9 Length = 600 Score = 320 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 68/342 (19%), Positives = 131/342 (38%), Gaps = 55/342 (16%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 ++ L RP+ GQ+ ++ L AI+ + H+ + GP GTGKTT+A+ Sbjct: 2 KMAYKSLYRTYRPQTFKDVAGQEAII---TTLKHAIDEKKIAHAYLFCGPRGTGKTTVAK 58 Query: 69 VIARYANA-----------------------DVERISAVTSGVKEIREAIERARQNRNAG 105 ++A+ N +E +A +GV+E+R I++ + G Sbjct: 59 LLAKAVNCTGNPKPCGECENCKQIENGTHPDVIEIDAASNNGVEEVRSLIDKVKYAPTQG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ + FI ATTE ++ ++SR + + Sbjct: 119 QYKVYIIDEVHMMSPGAFNALLKTLEEPPAHVIFILATTE--PHKILPTIISRCQRFDFT 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 L+ +++ Q + ++++ + D + IA L NG R AL+ LE Sbjct: 177 RLTDQEMVQRMQYVLKEEGK-------TYDDGSLELIARLANGGMRDALSILEQCLAY-- 227 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 L + I G S L K + +L ++ Sbjct: 228 ----NDDHLSINDIHTIYGIVSMDDKTN----------LLKVLLSKNMSESLKILDKMDK 273 Query: 284 AGGDPLYVARRCLAIASEDVGNADP-RAMQVAIAAWDCFTRV 324 +G D + + I + V + A +++ + Sbjct: 274 SGIDIKRLTFDLIDILKDIVVYRNTKDASIMSVMTQKDLENI 315 >UniRef50_Q7NK69 DNA polymerase III gamma and tau subunits n=1 Tax=Gloeobacter violaceus RepID=Q7NK69_GLOVI Length = 632 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 68/343 (19%), Positives = 139/343 (40%), Gaps = 58/343 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++PL + RP+ +GQ ++ L A++AG + H+ + G GTGKTT A + Sbjct: 1 MAYEPLHHKYRPQRFGDVVGQGPIV---TTLTNALKAGRIAHAYLFTGSRGTGKTTTARL 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 IA+ N +E +A +GV IRE IERA+ Sbjct: 58 IAKALNCIHGPTPDPCGRCEQCLAIATGSALDVIEIDAASNTGVDNIRELIERAQFAPVQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R+ + +DEVH + + + L +E+ +TF+ ATT+ ++ ++SR + + Sbjct: 118 SRQKVYILDEVHMLSSAAFNCLLKTLEEPPAHVTFVLATTD--PQKVLPTVISRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + D+ + L + +DI + E +A++ G R A + L+ +A + Sbjct: 176 RRIPLTDMVKHLEEIA-------WKEDIDIEHEAVELVAQIAQGGLRDAESLLDQLALL- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + E + ++ G R + + ++ + R++ Sbjct: 228 ------EGTIGAERIWQLVGAVPERELLV----------IGECIQAGDSTRLIEQVRRLL 271 Query: 283 TAGGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRV 324 +G +PL V + L + + + P + + ++ Sbjct: 272 DSGKEPLQVLQDLLGFYRDLLIAHTAPDRRDLVAVTAASWQQM 314 >UniRef50_B5Y7S3 DNA polymerase III, gamma and tau subunit n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7S3_COPPD Length = 522 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 79/355 (22%), Positives = 141/355 (39%), Gaps = 58/355 (16%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L + RP+ + +GQ H+ + L +A++ + H+ + GP G+GKT+ A + A+ Sbjct: 2 ALYRKYRPQTFEEVVGQSHVT---EILTKALDNQKISHAYLFAGPKGSGKTSCARIFAKG 58 Query: 74 ANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRT 108 N + +E +A GV EIRE ER + R Sbjct: 59 LNCETGITSKPCNECESCKLINEGHSLDVIEIDAASNRGVDEIRELRERVKYRPAQSRYK 118 Query: 109 ILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DE H + +A L +E+ + FI ATT+ ++ +LSR + + K L+ Sbjct: 119 VYIIDEAHMLTREAFNALLKTLEEPPEYVVFILATTD--PQKIPPTVLSRCQRFRFKKLT 176 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 ++++ Q+L + + E IAE+ +G R ALN LE ++ + E Sbjct: 177 SDEVFQILENVCK-------SEGFSYQREALELIAEVSDGAVRDALNLLEQISVVDEGKV 229 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 S K + E ++I L K+ D A+ A ++ +G Sbjct: 230 SIKTARFLLNVVE----------------DEVILDLLKTAFA-DMDEAVERLAELMESGV 272 Query: 287 DPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAI-AQAIVYL 340 +P+ + R ++ V P VA+ + A A+V L Sbjct: 273 EPMELFRTMKSLVRRSVFRNKPWPRDVALEMFRVLESYNFIMERTEFPAVALVAL 327 >UniRef50_Q0HHZ2 DNA polymerase III, subunits gamma and tau n=5 Tax=Gammaproteobacteria RepID=Q0HHZ2_SHESM Length = 1071 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 87/391 (22%), Positives = 151/391 (38%), Gaps = 66/391 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHA---LTNALTQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 176 KSLTQQEIGTQLQHILTQ-------EQLPFEHEALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + L K++ + + A+++ Sbjct: 228 -----GGGTVMLNQVQSMLGSIDEQH----------VLRLLKALTDADIGVLMQSCAQVL 272 Query: 283 TAGGDPLYVARRCLAIASED-VGNADPRAMQVAI--AAWDCFTRVGPAEGERAIAQAIV- 338 G D V R L + + + P A Q ++ A F E + Q ++ Sbjct: 273 AYGADAQEVLRSLLELLHQITLTQFAPAAAQQSLYSAQIQAFAEQLAPEQVQLYYQILLT 332 Query: 339 ---YLACA--PKSNAVYTAFKAALADARERP 364 L A PKS + A A+A E+P Sbjct: 333 GRKDLPHAPDPKSG-LEMALLRAVAFVPEKP 362 >UniRef50_B8I549 DNA polymerase III, subunits gamma and tau n=5 Tax=Clostridium RepID=B8I549_CLOCE Length = 562 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 63/323 (19%), Positives = 121/323 (37%), Gaps = 56/323 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L + RP + Q+H++ + + +++G + H+ + G GTGKTT+A++ Sbjct: 1 MSYTALYRKWRPLVFEDVVEQEHVV---RTIKNTVKSGRIAHAYLFCGTRGTGKTTMAKI 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 AR N VE +A + V +RE + + Sbjct: 58 FARAINCINPKDGNPCNECEVCRGILDESILDVVEIDAASNNSVDNVREIRDEVVYAPSQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + +A L +E+ + FI ATT+ +L + +LSR + + Sbjct: 118 ARYKVYIIDEVHMLSSGAFNALLKTLEEPPGHVVFILATTD--PHKLPATILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++ I + + + I + D+ IA L +G R AL+ L+ Sbjct: 176 KKITPAGIAERVKLIAQ-------ASGINIDDDGALLIARLADGALRDALSILDQCIA-- 226 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + + G S D IS + ++ + + + Sbjct: 227 ----EGSTTITYQNVLDAIGIVS----------DDFISEIVDNIESKNVEGLVASVEMLS 272 Query: 283 TAGGDPLYVARRCLAIASEDVGN 305 G D L A + + Sbjct: 273 AEGRDILRFASDLVLYFRNLLIC 295 >UniRef50_D2RLY2 DNA polymerase III, subunits gamma and tau n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLY2_ACIFE Length = 671 Score = 320 bits (821), Expect = 6e-86, Method: Composition-based stats. Identities = 73/379 (19%), Positives = 138/379 (36%), Gaps = 68/379 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L RP++ +GQ + K L A+E G + H+ + GP GTGKT+ A + Sbjct: 1 MAYVALYRTWRPQDFDDLVGQAPI---KKALTNALETGRISHAYLFAGPRGTGKTSTARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + VE +A G+ EIR+ E+ + Sbjct: 58 LAKALNCEKGPTAHPCNQCSNCREITEGTCGDVVEIDAASNRGIDEIRKLREQVYFAPTS 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 CRYKVYIIDEVHMITTDAFNALLKTLEEPPEHVVFILATTE--PQKILNTILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + ++I + L + + G I E R +A +G R AL+ L+ + MA Sbjct: 176 RRATVDEIAEHLEKVAK-------GSHIQAEPEALRLMAIQADGGLRDALSLLDQCSVMA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G L + AL +++ Sbjct: 229 S-------PVTAETVRQVLGLVGREKLR----------ELVTRIGQKNLSGALDALGQLL 271 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLAC 342 G + + L + A + + + A+A+ L Sbjct: 272 EQGKEMEQILAELLEYFRALLLYQ----------ADREYQEIYLTDTREALAETAS-LFT 320 Query: 343 APKSNAVYTAFKAALADAR 361 + + A A+ +++ Sbjct: 321 SSQIVASVERIHEAIRESK 339 >UniRef50_Q2LYB8 DNA polymerase III subunit gamma/tau n=2 Tax=root RepID=Q2LYB8_SYNAS Length = 588 Score = 320 bits (821), Expect = 6e-86, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 56/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + LA + RP+ +GQQH++ L AI + H+ + GP G GKT++A + Sbjct: 1 MDYLVLARKWRPQVFEDVVGQQHVVQ---TLKNAIRQERIAHAFLFSGPRGVGKTSIARI 57 Query: 70 IARYANADV-------------------------ERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + E A G+ EIRE ER R + Sbjct: 58 LAKAINCEQGPAGTPCNVCTNCREITEGISMDVREIDGASNRGIDEIRELRERIRFLPVS 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R + +DEVH + +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 CRYKVYIIDEVHMLTREAFNALLKTLEEPPPHVVFIFATTET--HKVPATILSRCQCFEF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + LS I + L + E + I + D IAE +G R + + + + A Sbjct: 176 RRLSLRQIAEQLRKIAE-------TEKIRISDAGLAWIAEAGDGSMRDSESIFDQVISYA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 ++ E + E+ G RF + L ++V L Sbjct: 229 GT------AIEDEAVEELLGRTDRRF----------LFQLSEAVLRRDAGQCLRIVEEGY 272 Query: 283 TAGGDPLYVARRCLAIASEDV 303 AG D Y L + Sbjct: 273 YAGLDMTYFYTLLLHHFRNLL 293 >UniRef50_Q117S8 DNA polymerase III, subunits gamma and tau n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q117S8_TRIEI Length = 695 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 70/345 (20%), Positives = 137/345 (39%), Gaps = 60/345 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++PL + RP+ A +GQ + + L AI + + + GP GTGKT+ A V Sbjct: 1 MAYEPLHHKYRPQTFADLVGQDVI---AQTLTNAIHTKRIAPAYLFTGPRGTGKTSSARV 57 Query: 70 IARYANA---------------------------DVERISAVTSGVKEIREAIERARQNR 102 +A+ N +E +A +GV IRE IER++ Sbjct: 58 LAKSLNCLSYDHPTPSPCGTCNVCVGITKGSTLDVIEIDAASNTGVDNIRELIERSQFAP 117 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVY 160 R + +DEVH + S +A L +E+ + FI ATT+ + + ++SR + + Sbjct: 118 VQCRYKVYVIDEVHMLSVSAFNALLKTLEEPPKGVVFILATTD--PQRVLATIISRCQRF 175 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 + + E + + L + + I + E + IA++ G R A + L+ ++ Sbjct: 176 DFRRIPLEAMVKHLHHIAIE-------EKIDITTEAIQMIAQIAQGGLRDAESLLDQLSL 228 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 +A + E + ++ G R DL+ L +++ L + Sbjct: 229 LA-------GEITVERVWDLVGAVPER---------DLMV-LVEAIAADNSIKVLKCTRQ 271 Query: 281 IITAGGDPLYVARRCLAIASE-DVGNADPRAMQVAIAAWDCFTRV 324 I+ G +P+ V + + + P + + + ++ Sbjct: 272 IMDRGKEPIIVLQNLAGFYRDLLIAKTAPTSKNLVALTKPTWEKL 316 >UniRef50_C2H810 DNA-directed DNA polymerase n=16 Tax=Lactobacillales RepID=C2H810_ENTFC Length = 581 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 86/430 (20%), Positives = 154/430 (35%), Gaps = 87/430 (20%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +Q L R + +GQ+ + L AI + H+ + GP GTGKT+ A++ Sbjct: 1 MAYQALYRVWRSQRFEDIVGQKAVTQ---TLKNAIVSHKTSHAYLFTGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A +GV+EIR +RA Sbjct: 58 FAKAINCPNSKDGEPCNECEMCRSITAGTQEDVIEIDAASNNGVEEIRFIRDRANYAPTK 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ + FI ATTE ++ + ++SR + + Sbjct: 118 AAYKVYIIDEVHMLSTGAFNALLKTLEEPKESVIFILATTE--PHKIPATIISRTQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K ++T DI + L +++ T I IA G R AL+ L+ + Sbjct: 176 KRINTADIVEHLEFILKEST-------INYEPAALNVIARSAEGGMRDALSILDQAISFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 E + + ++ G + +++ + + AL +I+ Sbjct: 229 EGT------ITLDDAMQVTGSLT----------DEMMDSYLSACVKKEVPEALEALNQIL 272 Query: 283 TAGGDPLYVARRCLAIASEDVGN-ADPRA--------------MQVAIAAWDCFTRVGPA 327 AG + L + + P + ++A F+ + Sbjct: 273 AAGKESRRFLEDMLQYCRDLLMYQQAPNLVEEQSSTIRSTFTELAQTVSADQLFSMIKIL 332 Query: 328 -----------EGERAIAQAIVYLACAPKSNAVYTAFKAALAD--ARERPDYDVPVHLRN 374 + A V LA P S +V +A K ALAD ++ ++ LRN Sbjct: 333 SDTQNEIRFTNSAAIYLEVATVKLAQLP-SASVPSA-KMALADDQIVKQLQQEI-KELRN 389 Query: 375 APTKLMKEMG 384 +L G Sbjct: 390 EIKELRSNTG 399 >UniRef50_C8W2P9 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2P9_DESAS Length = 527 Score = 320 bits (820), Expect = 9e-86, Method: Composition-based stats. Identities = 72/358 (20%), Positives = 137/358 (38%), Gaps = 58/358 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ L RP+ A+ +GQ+H++ L A++ + H+ + GP GTGKT+ A++ Sbjct: 1 MAYRALYREYRPQLFAEIMGQRHIVD---TLENALKNNRIAHAYLFCGPRGTGKTSTAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A G+ EIR+ ER + Sbjct: 58 LAKALNCHQIKGVEPCNKCSSCVSVAQGSAIDVIEIDAASNRGIDEIRDLKERVKFAPTG 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 G+ + VDEVH +A L +E+ + F+ ATTE +L +LSR + + Sbjct: 118 GKYKVYIVDEVHMLTIEAFNALLKTLEEPPEHVIFVLATTE--PHKLPLTILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KS+ E + L ++D + + I + G R AL+ L+ + Sbjct: 176 KSIGAEPMTSRLKDILQDLQ-------VKISPAALELIVQAAEGGLRDALSILDQIITF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + E + + G + R +I++L + + ++L A I Sbjct: 228 ----NNTAEISEEDIHNLLGTVNER----------VINSLLEYLLRGDAGSSLQVIAEIF 273 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYL 340 G D + + + + AI + ++ E A+ + L Sbjct: 274 LEGKDLKMFVKGFASCVRDLLL---QSIEPTAIKNFSRTDQIYSVEYLLALLDCLTEL 328 >UniRef50_A0KY06 DNA polymerase III, subunits gamma and tau n=5 Tax=Proteobacteria RepID=A0KY06_SHESA Length = 1040 Score = 320 bits (820), Expect = 9e-86, Method: Composition-based stats. Identities = 87/391 (22%), Positives = 151/391 (38%), Gaps = 66/391 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHA---LTNALTQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPKHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 176 KSLTQQEIGTQLQHILTQ-------EQLPFEHEALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + L K++ + + A+++ Sbjct: 228 -----GGGTVMLNQVQSMLGSIDEQH----------VLRLLKALTDADIGVLMQSCAQVL 272 Query: 283 TAGGDPLYVARRCLAIASED-VGNADPRAMQVAI--AAWDCFTRVGPAEGERAIAQAIV- 338 G D V R L + + + P A Q ++ A F E + Q ++ Sbjct: 273 AYGADAQEVLRSLLELLHQITLTQFAPAAAQQSLYSAQIQAFAEQLAPEQVQLYYQILLT 332 Query: 339 ---YLACA--PKSNAVYTAFKAALADARERP 364 L A PKS + A A+A E+P Sbjct: 333 GRKDLPHAPDPKSG-LEMALLRAVAFVPEKP 362 >UniRef50_C5TP18 DNA polymerase III subunit tau n=3 Tax=Neisseriaceae RepID=C5TP18_NEIFL Length = 666 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 73/352 (20%), Positives = 145/352 (41%), Gaps = 70/352 (19%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 +Q LA + RP+ A +GQ+H++ K L A++ G LH +L G G GKTT+A + Sbjct: 1 MAYQVLARKWRPKTFADLVGQEHVV---KALRNALDEGRLHHAYLLTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A +G+ IRE +E A+ A Sbjct: 58 LAKSLNCENAVHGEPCGQCESCTQIDSGRYVDLLEIDAASNTGIDNIREVLENAQYAPTA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 G+ + +DEVH +KS +A L +E+ + FI ATT+ ++ +LSR ++L Sbjct: 118 GKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTD--PHKVPITVLSRCLQFVL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++++T+ + + L ++ +++ + + + G R AL+ L+ M Sbjct: 176 RNMTTQQVAEHLAHVLDR-------ENVPYQPQALQLLGRAAAGSMRDALSLLDQAIAM- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + ++ G ++ + L + + +A L + Sbjct: 228 -----GSGKVAEQDVRQMIGAVDKQY----------LFELLEGIINQNGEALLEKAQEMS 272 Query: 283 TA--GGD-----PLYVARRCL-------AIASEDVGNADPRAMQVAIAAWDC 320 G D + +R A+A++D + A++ Sbjct: 273 ARAIGFDSALAELAMLLQRLALIQTIPSALANDDPERETLLRLSQALSGEQI 324 >UniRef50_B8FY14 DNA polymerase III, subunits gamma and tau n=2 Tax=Desulfitobacterium hafniense RepID=B8FY14_DESHD Length = 554 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 74/349 (21%), Positives = 124/349 (35%), Gaps = 62/349 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L RP+N +GQ H+ K L A+ + H+ + GP GTGKTT A+V Sbjct: 1 MAYLALYREWRPKNFKDMVGQDHVT---KTLTNALMQSKVAHAYLFSGPRGTGKTTTAKV 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + E +A G+ EIR+ ++ R + Sbjct: 58 LAKALNCEHREGVEPCNQCAFCLSIDQGSAMEVFEIDAASNRGIDEIRDLRDKVRLSAGE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 + + +DEVH +A L +E+ + FI ATTE ++ +LSR + + Sbjct: 118 SKYKVYIIDEVHMLTTEAFNALLKTLEEPPERVVFILATTE--VHKIPLTILSRVQRFEF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + E I L + + R + E + IA+ G R AL+ L+ + Sbjct: 176 HRIPLEQIHSHLDKVCQTIGR-------DVEPEALQIIAQKSEGGLRDALSILDQCLLL- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 L E + ++ G F + L + AL I Sbjct: 228 ------DGKLGVEQVYQVLGMVGEEFSAQ----------LVDHLLTGDYAKALGCLGEGI 271 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAI-----AAWDCFTRVGP 326 G DP + R L + + A +A ++G Sbjct: 272 NQGMDPRQIIRELLDYMRQALLYASTQAFPQVAPHLREHLAYQCQKLGL 320 >UniRef50_D1BPK5 DNA polymerase III, subunits gamma and tau n=4 Tax=Firmicutes RepID=D1BPK5_VEIPT Length = 895 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 80/355 (22%), Positives = 136/355 (38%), Gaps = 66/355 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + L + RP+ +GQ + L RAI + H+ + GP GTGKT++A++ Sbjct: 1 MAYIALYRKYRPQTFTDVVGQHQV---SDTLMRAIREDKVAHAYLFAGPRGTGKTSMAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 AR N + +E +A G+ E+R E + Sbjct: 58 FARAINCEHGPTDHPCNECSACRSILSGQSMDVLEIDAASNRGIDEVRALRESVKFMPVE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR+ + +DE H +A L IE+ + FI ATTE +L ++SR + Y Sbjct: 118 GRKKVFIIDEAHMLTTEAWNALLKTIEEPPAHVMFIFATTE--IEKLPVTIVSRCQRYTF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ++++DI Q L+ E + L + IA +G R AL+ L+ A MA Sbjct: 176 RRITSDDIAQRLSYVAEK-------EGFDLDSAAAQLIAVHADGGLRDALSILDQCAGMA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + P+++ E+ G S + I ++R L + + Sbjct: 229 TGS------ITPQVVEELIGLVSK----------EWIIHFLDALRNGDGPKVLSYVHDAL 272 Query: 283 TAGGDPLYVARRCLAIAS-EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQA 336 G D + + VG P A ++ +D F + +AQA Sbjct: 273 AEGRDATQIMEALIQHVRALLVGKVAPDADEL--KVYDAFK-------DEFLAQA 318 >UniRef50_Q2RZH6 DNA polymerase III, subunits gamma and tau, putative n=2 Tax=Rhodothermaceae RepID=Q2RZH6_SALRD Length = 728 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 72/426 (16%), Positives = 136/426 (31%), Gaps = 92/426 (21%) Query: 8 FSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTL 66 + + A + RP + + Q+H+ + L AI L H+ + GP G GKTT Sbjct: 1 MDEQRYLVTARKYRPSLFTEVVAQEHVT---ETLKNAIRMERLAHAYLFSGPRGVGKTTA 57 Query: 67 AEVIARYANAD------------------------------VERISAVTSGVKEIREAIE 96 A ++A+ N + E +A + V +IRE E Sbjct: 58 ARILAKAINCETPREEREDGAEPCCECDSCESFEAGRSLNVFEMDAASNNKVDDIRELRE 117 Query: 97 RARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALL 154 + R ++ + +DEVH +K +A L +E+ FI ATTE ++ +L Sbjct: 118 KVRIPPQGDQKKVYILDEVHMLSKQAFNALLKTLEEPPAHALFIFATTE--PHKVLPTIL 175 Query: 155 SRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNT 214 SR + + + + +I Q L + E + + +E+ +A NG R AL+ Sbjct: 176 SRCQRFDFRRIPVPEIVQRLREICE-------TEGVEADEESLMLLARKGNGALRDALSA 228 Query: 215 LEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAA 274 + + + + + + DL L V Sbjct: 229 FDQALSLCGATLEYGELTQALGVVD----------------QDLYFRLTDHVAAQDTAGM 272 Query: 275 LYWYARIITAGGDPLYVARRCLAIASEDVG---NADPRAMQVAIAA-------------W 318 + ++ +G D + + +VA + Sbjct: 273 IELVRHVVRSGYDLQEMLVGLAEHLRNLLVAHSLGGEALEEVAESTRTRYADEAERFDEA 332 Query: 319 DCFTRVGP-----------AEGERAIAQAIVYLACAPKS---NAVYTAFKAALADARERP 364 D + + + ++ +A +S AV A + Sbjct: 333 DLLRLLTMAADTEDDIKQSPQPRLTLETTLLKMAQLRRSADLRAVLEKIDRLEQMAEDGD 392 Query: 365 DYD-VP 369 + VP Sbjct: 393 LPEAVP 398 >UniRef50_B0RYK4 DNA polymerase III tau and gamma subunits n=20 Tax=Xanthomonadaceae RepID=B0RYK4_XANCB Length = 752 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 70/332 (21%), Positives = 131/332 (39%), Gaps = 60/332 (18%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAE 68 ++ LA + RP+ A+ +GQ+H++ + L A+++G +H + G G GKTT+A Sbjct: 99 PMSYLVLARKWRPKRFAELVGQEHVV---RALSNALDSGRVHHAFLFTGTRGVGKTTIAR 155 Query: 69 VIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRN 103 + A+ N + +E +A +GV ++RE IE A+ + Sbjct: 156 IFAKSLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPS 215 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 G+ + +DEVH +K+ +A L +E+ + F+ ATT+ +L +LSR + Sbjct: 216 RGKFKVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFN 273 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 LK L + I+ +T+ + ++I +++ +G R L+ L+ Sbjct: 274 LKRLDEDQIQGQMTRIL-------AAEEIESDPSAIVQLSKAADGSLRDGLSLLDQAIAY 326 Query: 222 AEVDDSGKRVLKPELLTEIAG---ERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWY 278 A V + A D G + +++AL + L Sbjct: 327 AGGALREDVVRTMLGTVDRTQVGAMLQALSDGDGAQLLKVVAALAEF--SPDWSGVLEAL 384 Query: 279 ARIITA---------------GGDPLYVARRC 295 A + G DP A + Sbjct: 385 AEALHRIQVQQLVPSVAFVGDGIDPTGFAAQL 416 >UniRef50_C3J7N6 DNA polymerase III, subunit gamma and tau n=2 Tax=Bacteria RepID=C3J7N6_9PORP Length = 594 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 138/372 (37%), Gaps = 64/372 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP++ +GQ+ + + L RAI H+ + GP G GKT+ A + A Sbjct: 5 FVVSARKFRPDSFESLLGQEAV---SETLRRAILQQKTAHAYLFCGPRGVGKTSAARIFA 61 Query: 72 RYANA--------------------------DVERISAVTSGVKEIREAIERARQNRNAG 105 R N E +A + +IR+ IE G Sbjct: 62 RAINCASPLASGEACGECDSCRAFAEQRSFNVFEMDAASNNSANDIRQLIEEVNIPPQVG 121 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 R I +DEVH + + +AFL +E+ + FI ATTE ++ +LSR +V+ K Sbjct: 122 RYKIYIIDEVHMLSTAAFNAFLKTLEEPPEYVVFIMATTE--KQKILPTILSRCQVFDFK 179 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + ++ I L + ++I + ++ IA +G R AL+ + +A + Sbjct: 180 PIPSDVIIGQLRHIAQ-------LEEIQVEEKALELIARKADGGMRDALSVFDRIASYTD 232 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + S R L+ + + D + + + L +I Sbjct: 233 GEVSYSRTLESLNILD----------------DDYYFRFVDLLVHNDYASTLLLLDELIM 276 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQ---VAIAAWDCFTRVGPAEGERAIAQAIVYL 340 G DP + + DP+ + + + ++ A G + QAI L Sbjct: 277 RGFDPRTIVLGLTDFLRNLLLAFDPQTLPLLHLTKETEASYNQLAQASGRGFLYQAIAKL 336 Query: 341 ACAPK----SNA 348 K SNA Sbjct: 337 MECLKEYRNSNA 348 >UniRef50_Q39Q40 DNA polymerase III, subunits gamma and tau n=7 Tax=Desulfuromonadales RepID=Q39Q40_GEOMG Length = 582 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 129/356 (36%), Gaps = 66/356 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ LA + RP+ + GQ+H+ + L AI++G + H+ + G G GKT+ A + Sbjct: 1 MSYLVLARKWRPQTFSDLTGQEHV---SQTLQNAIDSGRIAHAFLFTGARGVGKTSSARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ + +E A +GV +IRE E + + Sbjct: 58 LAKALTCEQGMSPEPCNVCPACTEITAGTAVDVLEIDGASNTGVDDIRELRENVKYLPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R I +DEVH + + +A L +E+ + FI ATTE ++ +LSR + + Sbjct: 118 LRYKIFIIDEVHMLSTNAFNALLKTLEEPPPHVKFIFATTE--PHKVPITILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + + L ++ + I + D + +A +G R +L+ L+ + Sbjct: 176 RRIPLGKVVGRLRHIVDQ-------EGIAISDASLTMVARKGDGSMRDSLSVLDQVLAFC 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 ++ E + + G R +V G L AR+ Sbjct: 229 G------DQVRDEEVVSLLGVVDRRLLLDATA----------AVFGRDTRTVLDIVARVD 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERA-IAQAI 337 G + + + A D + +E E A + Q Sbjct: 273 EFGYNMRQFCGELIDHLRNLLIL---------KAVGDGTDLLDLSEAELATLRQQA 319 >UniRef50_D0KYU5 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYU5_HALNC Length = 591 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 82/395 (20%), Positives = 145/395 (36%), Gaps = 81/395 (20%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++ LA + RP++ A+ +GQ H+L A L A++ LH + G G GKTT+A + Sbjct: 1 MSYLVLARKWRPKSFAEMVGQGHVLQA---LTNALDQSRLHHAYLFTGTRGVGKTTVARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A +GV + R+ +E Sbjct: 58 FAKALNCEHGISSTPCGVCSACVEIDQGRFVDLIEVDAASRTGVDDTRDLLENVAYAPVR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR I +DEVH F+KS +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKIYLIDEVHMFSKSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++L I+Q L ++ ++I IAE NG R AL+ L+ Sbjct: 176 RALPLSQIQQHLADVLQK-------ENIAFEPAALHLIAEAANGSMRDALSLLDQAIAFT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + +D+I AL++ + D + Sbjct: 229 GGK------------LDTVQVSQILGLSDHQIIWDMIDALYQ----QSADRLFALVDEAL 272 Query: 283 TAGGDPLYVARRCLAIAS-------------------EDVGNADPRAMQV--AIAAWDCF 321 +P + + + +++ + DP+ +Q+ IA Sbjct: 273 DRAVEPAILLAQFIESIHQLAMGQWIQSMSAAANPPPDELKSIDPQLLQLWYQIATTGRR 332 Query: 322 TRVGPAEGERAIAQAIVY-LACAP---KSNAVYTA 352 + ++ LA P SN A Sbjct: 333 DMAWSPNARIGLEMTLLRMLAFQPGGEASNGAVKA 367 >UniRef50_A5D6B1 DNA polymerase III, gamma/tau subunits n=3 Tax=Peptococcaceae RepID=A5D6B1_PELTS Length = 558 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 84/370 (22%), Positives = 130/370 (35%), Gaps = 65/370 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 T+ L RP + IGQ+H+ + L A+EAG + H+ I G GTGKTT A+V Sbjct: 1 MTYLALYREWRPRTFGEIIGQEHIT---RTLKNAVEAGRVGHAYIFCGARGTGKTTAAKV 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A G+ EIR+ E+ R A Sbjct: 58 LAKALNCTGREGAEPCNRCESCRAVNEGISVDVIEIDAASNRGIDEIRDLREKIRFAPAA 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +A L +E+ I ATTE + +LSR + + Sbjct: 118 GRYRVYIIDEVHMLTSEAFNALLKTLEEPPRHAVLILATTE--PHRVPLTILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + DI + L + G + + +E R IA G R AL+ L+ A Sbjct: 176 RRIIPADIIKRLKEVA-------AGARLEVEEEALRLIARAAEGGLRDALSILDQAAAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + +I G D + + + AL + + Sbjct: 228 -----GGMKVTEAGVHQILGTVRT----------DALDRMAGCLAAGEAGRALRLVSELA 272 Query: 283 TAGGDPLYVARRCLAIAS----EDVGNADPRA---MQVAIAAWDCFTR--VGPAEGERAI 333 G D AR E + P A A G I Sbjct: 273 GEGKDLRLFARELAGYLRALLLEKISPGTPAGEAWGDTARMAAQAAEFSEAGLVRAVEII 332 Query: 334 AQAIVYLACA 343 A+A + + Sbjct: 333 ARAEQDMKWS 342 >UniRef50_Q8EFG0 DNA polymerase III, gamma and tau subunits n=1 Tax=Shewanella oneidensis RepID=Q8EFG0_SHEON Length = 1002 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 87/389 (22%), Positives = 150/389 (38%), Gaps = 66/389 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPATFEQMVGQSHVLHA---LTNALTQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCETGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I L + + + E +A+ NG R AL+ + Sbjct: 176 KSLTQQEIGTQLQHILTQ-------EQLPFEHEALGLLAKSANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G + + L K++ + A + A+++ Sbjct: 228 -----GGGTVMLNQVQSMLGSIDEQH----------VLGLLKALTDADIGALMQSCAQVL 272 Query: 283 TAGGDPLYVARRCLAIASED-VGNADPRAMQVAI--AAWDCFTRVGPAEGERAIAQAIV- 338 G D V R L + + + P A Q ++ A F E + Q ++ Sbjct: 273 AYGADAQEVLRSLLELLHQITLTQFAPAAAQQSLYSAQIQAFAEQLAPEQVQLYYQILLT 332 Query: 339 ---YLACA--PKSNAVYTAFKAALADARE 362 L A PKS + A A+A E Sbjct: 333 GRKDLPHAPDPKSG-LEMALLRAVAFVPE 360 >UniRef50_B7IZ38 DNA polymerase III subunit gamma/tau n=4 Tax=Bacillus cereus group RepID=B7IZ38_BACC2 Length = 548 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 131/321 (40%), Gaps = 56/321 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP N ++ IGQ H+ + + A++ H+ + GP GTGKTT+A++IA Sbjct: 2 YQALYRKYRPTNFSELIGQNHI---KQTIQNALKLAKFSHAYMFTGPRGTGKTTIAKLIA 58 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 N + +E +A +GV++IRE E+ G Sbjct: 59 TSLNCESLNNEGEPCNECSQCKAIRGNSHADVLEIDAASNNGVEQIREIREQVAYAPGTG 118 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ + FI ATT+ ++ + ++SR + + + Sbjct: 119 KYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTD--VHKIPATIISRCQRFDFR 176 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + DI + L +++ + ++ + + L G R AL+ ++ A Sbjct: 177 RIGPRDIIERLRHVAIK-------EEVKIEEDALQLLGMLAQGGMRDALSLMDQTIAFA- 228 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + ++E+ G S + I A + L ++I Sbjct: 229 ----TNETITKDDVSEVVGRISI----------EKIEACIGDLLKGNTIEILNLINQVIL 274 Query: 284 AGGDPLYVARRCLAIASEDVG 304 G +P+Y+ + + V Sbjct: 275 NGKEPIYLLEDLIGYLRDLVI 295 >UniRef50_C7N1K9 DNA polymerase III, subunit gamma/tau n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N1K9_SLAHD Length = 807 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 68/317 (21%), Positives = 114/317 (35%), Gaps = 57/317 (17%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIAR 72 + L + RP+ +GQ H+ + L A++ H+ H+ + GP GTGKTT+A ++A+ Sbjct: 3 EALYRKYRPQTFDDVVGQTHV---ERTLKNALQQDHVSHAYLFCGPRGTGKTTMARLLAK 59 Query: 73 YANADV-------------------------ERISAVTSGVKEIRE-AIERARQNRNAGR 106 + E +A +GV +RE I R + GR Sbjct: 60 ALLCEHGPTPSPDGTCEECQLIAEGAHPDVNELDAASRTGVDNVREEIIGRVQFAPTRGR 119 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH +A L +E+ + F+ TT+ ++ +LSR + + Sbjct: 120 YKIYIIDEVHMLTVPAFNALLKTLEEPPAHVVFVMCTTD--PQKIPETILSRCQRFDFHR 177 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 LS E+I L +D+ E IA G R AL LE + Sbjct: 178 LSNEEIVSRLGAVCM-------AEDVPFEGEALDLIARRAQGGMRDALTALEQLIAFGAG 230 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + ++ G +S + + A W A + Sbjct: 231 N------VTMDVANAALGSLDVND----------MSEIAGHIGRRDAAACFTWMAEYVET 274 Query: 285 GGDPLYVARRCLAIASE 301 G D AR + + Sbjct: 275 GADLAQFARDLASYVRD 291 >UniRef50_A4BJR3 DNA polymerase III subunits gamma and tau n=1 Tax=Reinekea blandensis MED297 RepID=A4BJR3_9GAMM Length = 677 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 84/393 (21%), Positives = 146/393 (37%), Gaps = 65/393 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP + +GQ H+L K L A++ LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPGTFDEMVGQVHVL---KALVNALDQERLHHAYLFTGTRGVGKTTIARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A + V++ RE +E + Sbjct: 58 LAKSLNCEQGVSSKPCGQCASCREIAEGRFVDLIEVDAASRTKVEDTRELLENVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++S E I Q L + + + + + AIAE G R AL+ + Sbjct: 176 KNMSREHIVQHLNHILT-------VEQVPFDEPSLWAIAEGAQGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L + + + G + L +++ D L + + Sbjct: 228 -----GHGALAEQEVAAMLGTVDLKRVLN----------LVRALLQKDADGLLAMVSELD 272 Query: 283 TAGGDPLYVARRCLAIA-SEDVGNADPRAMQVAI---AAWDCFTRVGPAEGERAIAQAIV 338 D + ++ + A P A+ A + G AE + Q Sbjct: 273 EHTPDYQTLLTELMSTLHRVAIAQAVPSAISNHKGDRDAIMALAKAGYAEDIQLYYQIAG 332 Query: 339 Y----LACAPKSNAVYT-AFKAALADARERPDY 366 L+ AP A + LA ++ P Sbjct: 333 KSKGELSLAPSERAGFEMTLLRMLAFSQTPPSS 365 >UniRef50_B4RLX5 DNA polymerase III subunits gamma and tau n=24 Tax=Neisseria RepID=B4RLX5_NEIG2 Length = 736 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 64/301 (21%), Positives = 125/301 (41%), Gaps = 56/301 (18%) Query: 9 SDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLA 67 + T+Q LA + RP+ + +GQ+H++ K L A++ G LH +L G G GKTT+A Sbjct: 28 KNMTYQVLARKWRPKTFSDLVGQEHVV---KALQNALDEGRLHHAYLLTGTRGVGKTTIA 84 Query: 68 EVIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNR 102 ++A+ N + +E +A +G+ IRE +E A+ Sbjct: 85 RILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIREVLENAQYAP 144 Query: 103 NAGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVY 160 AG+ + +DEVH +KS +A L +E+ + FI ATT+ ++ +LSR + Sbjct: 145 TAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTD--PHKVPVTVLSRCLQF 202 Query: 161 LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMAD 220 +L++++ + + L ++ + I + + G R AL+ L+ Sbjct: 203 VLRNMTAQQVADHLAHVLD-------SEKIAYDPPALQLLGRAAAGSMRDALSLLDQAIA 255 Query: 221 MAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYAR 280 + + + ++ G ++ + L + +A L Sbjct: 256 LGSGKVAEN------DVRQMIGAVDKQY----------LYELLTGIVNQDGEALLAKAQE 299 Query: 281 I 281 + Sbjct: 300 M 300 >UniRef50_A5IZC8 DNA polymerase III subunit gamma and TAU n=2 Tax=Mycoplasma RepID=A5IZC8_MYCAP Length = 614 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 121/320 (37%), Gaps = 54/320 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ L + RP+ GQ +++ L I + H+ + GP G GKT++A + Sbjct: 1 MSYKALYRKYRPKCFDDVKGQDYIIQ---TLKNIIRNRKISHAYLFCGPRGVGKTSVARI 57 Query: 70 IARYANA-----------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 A N +E +A +GV IRE ++ + + G Sbjct: 58 FANLINCYHNNDDYSKLCQICEENGSNTIDIIEMDAASNNGVDSIRELRDKIQHLPSVGN 117 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DEVH +K +A L +E+ + FI ATT+ ++ +LSR + + + Sbjct: 118 YKIYIIDEVHMLSKGAFNALLKTLEEPPAHVIFIFATTD--PQKIPLTILSRVQRFNFRR 175 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +S + + + + +E + I E IA L G R AL+ ++ Sbjct: 176 MSNDTLVKQIKSILEQ-------EGIKYDAEALPYIARLAVGSMRDALSIIDQANAY--- 225 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 G +K + G S D + + S+ + AL + Sbjct: 226 ---GNGYIKFSDVMYSFGITSN----------DNLIKIINSLYNGKSEEALMLLQDLKNG 272 Query: 285 GGDPLYVARRCLAIASEDVG 304 G DP + L+I + + Sbjct: 273 GIDPKQLVESLLSIFKDFII 292 >UniRef50_D1CBX8 DNA polymerase III, subunits gamma and tau n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBX8_THET1 Length = 550 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 64/319 (20%), Positives = 130/319 (40%), Gaps = 55/319 (17%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIAR 72 Q L + R + + +GQ+H+ K L AI++G + H+ + GP GTGKT+ A ++A+ Sbjct: 3 QSLYRKYRSQTFDELVGQEHV---KKTLINAIKSGKIAHAYLFCGPRGTGKTSTARLLAK 59 Query: 73 YANAD------------------------VERISAVTSGVKEIREAIERARQNRNAGRRT 108 N +E +A V+++ + IER R Sbjct: 60 AVNCLSEGTKPCNSCSACLSINEGRAVDLIEIDAASRRKVEDVADIIERVNFAPAELRYK 119 Query: 109 ILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLS 166 + +DEVH +A L +E+ F+ ATTE +++ ++SR + + + ++ Sbjct: 120 VYIIDEVHMLTTHAFNALLKTLEEPPAHAIFVLATTE--VWKVLPTIISRCQRFDFRRIT 177 Query: 167 TEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDD 226 +I + L E+ ++I + + AIA+ G R A++ L+ + Sbjct: 178 PREIVERLAFIAEN-------ENIKIQKDALIAIAKASTGSLRDAISILDQLTVY----- 225 Query: 227 SGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGG 286 G + E + ++ G D+++ ++ + AAL ++ G Sbjct: 226 -GDEEITLEHVKQLLGIVGE----------DVVANFVGAIIDNDTQAALSLLTQLSEHGV 274 Query: 287 DPLYVARRCLAIASEDVGN 305 DP + ++ + + Sbjct: 275 DPRQFTQELVSYLRDLMLL 293 >UniRef50_A8ZU40 DNA polymerase III, subunits gamma and tau n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZU40_DESOH Length = 570 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 120/321 (37%), Gaps = 56/321 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ LA + RP+ + + QQ + + L AI +G + H+++ GP GTGKTT+A + Sbjct: 1 MSYLVLARKYRPQTFEEVVEQQQVT---RTLTNAIASGRVAHAILFTGPRGTGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + E A + V ++RE + Sbjct: 58 LAKAMNCEKGPTPTPCCACRSCLEIASGNATDVFEIDGASNNSVDQVRELRGNVKFMPAH 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 I +DEVH + +A L +E+ + F ATTE ++ +LSR + + L Sbjct: 118 SPYKIYIIDEVHMLSGPAFNALLKTLEEPPAHVMFFFATTE--PHKIPVTILSRCQRHDL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + + L E ++I + ++ IA G R +L+ L+ + A Sbjct: 176 SFVGIDPLVAHLETLCEK-------ENIPIEKKSLELIAHEAGGSVRDSLSLLDQVMSSA 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + E++ E G ++I L +V AL + Sbjct: 229 QG------PVSHEMVLEALGIIDR----------EVIFGLSGAVLAGDMTGALDILDTVY 272 Query: 283 TAGGDPLYVARRCLAIASEDV 303 G D L + + Sbjct: 273 RGGHDIKRFYAEMLGHFRDLL 293 >UniRef50_UPI00016C0C4B DNA polymerase III, subunits gamma and tau n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C4B Length = 522 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 74/358 (20%), Positives = 133/358 (37%), Gaps = 65/358 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ + +GQ+H+ K L I+ + H+ + G GTGKTT A++ A Sbjct: 2 YLTLYRKYRPQKFSDMVGQEHIT---KTLKNQIKLNRIAHAYLFTGSRGTGKTTAAKIFA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 R N +E +A +GV +IR+ E G Sbjct: 59 RAINCKNSVDGKPCEKCVVCKEIAEGAFVNIIELDAASHNGVDDIRQINEEVLYTPAVGV 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + + +A L +E+ + FI ATT+ ++ + +LSR + + + Sbjct: 119 YKVYIIDEVHMLSPAAFNAMLKTLEEPPPYVVFILATTD--PQKIPATVLSRCQRFDFRR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +ST DI L M+ ++I + E IA L +G R AL+ LE Sbjct: 177 ISTSDICDCLLDYMQR-------ENIEIEKEAVELIARLADGGMRDALSILEQCISFYI- 228 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + + ++ G +++++A+ + A+ I Sbjct: 229 ----DEKITHSKVLKLVGAV------DNALLFEMMNAVIE----MDAAKAIAVCNEINQQ 274 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPA-EGERAIAQAIVYLA 341 G + A+ L + +A + E R + Q LA Sbjct: 275 GRNIKQFAKDLLMHTRNLL---------IAKTTEQKTEILDYTQEHVRELTQQANELA 323 >UniRef50_Q3IKN4 Putative DnaX, DNA polymerase III, gamma/tau subunits n=2 Tax=Alteromonadales RepID=Q3IKN4_PSEHT Length = 842 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 123/316 (38%), Gaps = 56/316 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP+ + +GQ H+ + L A+ LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPQTFHELVGQSHV---KQALVNALTQNRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N D +E +A + V++ RE ++ + Sbjct: 58 FAKSLNCDEGISANPCGQCSSCKDIEAGRYIDLLEIDAASRTKVEDTREILDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +K +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +LS +I+ L + + + D+ R IA+ +G R AL+ + Sbjct: 176 NALSQSEIKTQLEHVLTH-------EKLNFDDDALRIIAKAADGSMRDALSLTDQAIAQT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 D + + + + G + L ++ A + A + Sbjct: 229 NGD------INNQAVQTMLGLMDTHYSQS----------LLAALLAQDGAALMKEVANVA 272 Query: 283 TAGGDPLYVARRCLAI 298 + + + + +A+ Sbjct: 273 SRNPNYVALLDDLIAL 288 >UniRef50_C6PF43 DNA polymerase III, subunits gamma and tau n=2 Tax=Thermoanaerobacterales RepID=C6PF43_CLOTS Length = 533 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 129/320 (40%), Gaps = 57/320 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 +Q L + RP N ++ +GQ H++ + L I+ G + H+ + G GTGKT++A++ A Sbjct: 2 YQSLYRKYRPRNFSEVLGQNHIV---RTLKNQIKTGRIGHAYLFCGTRGTGKTSVAKIFA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N +E +A + V ++RE + + + Sbjct: 59 KAVNCPNSVEGEPCNRCQICESANNNSLIDIIEIDAASNNSVDDVRELRDNIIYAPSICK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH + S +A L +E+ FI ATTE ++ + +LSR + + K Sbjct: 119 YKVYIIDEVHMLSGSAFNALLKTLEEPPSHAIFILATTE--PNKIPATILSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + ++ I Q + + +D +I + + IA NG R A++ LE Sbjct: 177 IPSKVISQNIGKIAKDS-------NINIENRAIAMIARHGNGSMRDAISILEQCVSY--- 226 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 VL + + +I G + D + L K + + +++ Sbjct: 227 ----NDVLTYDDVCDILGTVN----------DDTLYTLVKRINDRNAKEVINQIDKLMLY 272 Query: 285 GGDPLYVARRCLAIASEDVG 304 G D + + L+ + V Sbjct: 273 GIDVSNLIKAMLSFLRDIVI 292 >UniRef50_Q2SIX1 DNA polymerase III, gamma/tau subunit n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SIX1_HAHCH Length = 735 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 81/374 (21%), Positives = 138/374 (36%), Gaps = 72/374 (19%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 +Q LA + RP N A+ GQ+H+L K L A+ LH + G G GKTT+A + Sbjct: 1 MAYQVLARKWRPGNFAEMAGQEHVL---KALTNALNQDRLHHAYLFTGTRGVGKTTVARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V+++RE ++ + Sbjct: 58 FAKCLNCEQGVSAIPCGECGVCREIAEGRFVDLIEIDAASRTKVEDMRELLDNVQYAPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R I +DEVH + S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 SRYKIYLIDEVHMLSNSSFNALLKTLEEPPPHVKFLLATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K+LS + I LT ++ +++ + +A G R A++ + Sbjct: 176 KNLSPQRIVSHLTHVLQ-------AENVPAEEAALWELARAAEGSMRDAMSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G L+ + + E+ G ++ L +++ A L + Sbjct: 228 -----GDGKLEAKDVIEMLGTIEKH----------VVIDLLRTIAAQDCAAMLAQVNHMA 272 Query: 283 TAGGDPLYVARRCLAIA-SEDVGNADP-------RAMQVAIAAWDCFTRVGPAEGERAIA 334 D YV + + V A P Q T AE + Sbjct: 273 QFAPDYAYVLQALAELLHRVAVEQAVPGGVDNSFGDQQQVSELAQTLT----AEDTQLYY 328 Query: 335 QAIVY----LACAP 344 Q + LA AP Sbjct: 329 QIALMGRKDLALAP 342 >UniRef50_Q12LL5 DNA polymerase III, subunits gamma and tau n=2 Tax=Shewanella RepID=Q12LL5_SHEDO Length = 921 Score = 317 bits (814), Expect = 5e-85, Method: Composition-based stats. Identities = 89/389 (22%), Positives = 152/389 (39%), Gaps = 66/389 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLLA---LTNALSQQRLHHAYLFTGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + Sbjct: 58 FAKGLNCETGVTASPCGTCSSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYKPAR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRFKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSLS ++I Q L + G + + + +A+ NG R AL+ + Sbjct: 176 KSLSQDEISQQLEFIL-------GQEQLPFESQALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + G R + L KS+ + + A+++ Sbjct: 228 -----GSGQVMLTQVQTMLGSIDERQ----------VIGLLKSLCDADIAHLMQTTAQVL 272 Query: 283 TAGGDPLYVARRCLAIASED-VGNADPRAMQVAIAAWDCFTRVGP--AEGERAIAQAIV- 338 + G D V R L + + + P A Q ++ + E + Q ++ Sbjct: 273 SFGADADEVLRSLLELLHQITLSQFAPAAAQHSLYSEQILAFAKQLKPEQVQLYYQILLT 332 Query: 339 ---YLACA--PKSNAVYTAFKAALADARE 362 LA A PKS + A A+A E Sbjct: 333 GRKELAFAPDPKSG-LEMALLRAVAFVPE 360 >UniRef50_B8CMY6 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8CMY6_SHEPW Length = 946 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 81/355 (22%), Positives = 139/355 (39%), Gaps = 65/355 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP Q +GQ H+L A L A+ LH + G G GKT+LA + Sbjct: 1 MSYQVLARKWRPAKFEQMVGQSHVLHA---LTNALTQQRLHHAYLFSGTRGVGKTSLARL 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + +E +A + V + RE ++ + + Sbjct: 58 FAKGLNCEQGVTATPCGQCSACVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++S +A L +E+ + F+ ATT+ L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTD--PQRLPVTVLSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 KSL+ ++I LT + + + +A+ NG R AL+ + Sbjct: 176 KSLTQDEISDQLTNVLT-------AESLEFEATALTLLAKAANGSMRDALSLTDQAIAF- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G +K EL+ + G + L+ AL K+ A + A ++ Sbjct: 228 -----GAGQVKLELVQTMLGSI------DEKQVIALLEALAKA----DVMALMQVSAGVL 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAI 337 + G +P V R L + + + A +E +A AQ + Sbjct: 273 SFGAEPEEVLRSLLELL---------HQITLTQFAPAAAQMSLYSEQIKAFAQQL 318 >UniRef50_C7RB01 DNA polymerase III, subunits gamma and tau n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB01_KANKD Length = 773 Score = 317 bits (812), Expect = 7e-85, Method: Composition-based stats. Identities = 73/381 (19%), Positives = 142/381 (37%), Gaps = 79/381 (20%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP+N + GQ+H+ + L AIE+G LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPKNFDELQGQEHV---SRALVNAIESGRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRN 103 +++ N + +E +A + V + RE +E + Sbjct: 58 LSKCLNCETNGLTSKPCGECGSCVEIDEGRFVDLIEVDAASRTKVDDTRELLENVQYKPT 117 Query: 104 AGRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYL 161 GR + +DEVH + S +A L +E+ + F+ ATT+ +L +LSR + Sbjct: 118 RGRYKVYLIDEVHMLSNSSFNALLKTLEEPPEHVIFLLATTD--PQKLPVTVLSRCLQFH 175 Query: 162 LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADM 221 LK + + I + L ++ + I I+ G R AL+ L+ Sbjct: 176 LKHMEEQTISKHLAYILQQ-------ESIDFETPALELISRSAEGSMRDALSLLDQAIAF 228 Query: 222 AEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARI 281 G+ ++ E + + G + + L +++ A+ A + Sbjct: 229 ------GQGKVQEEDIRTMLGTID----------HQFMVKLLEALANKDSAEAIKAVAEM 272 Query: 282 ITAGGDPLYVARRCLAIASE---------DVGNADPR----AMQVAIAAWDCFTRVGP-- 326 D + L+ + + A P A ++A + ++G Sbjct: 273 SHYPVDFADALKELLSRIHQVAIFQSTGVLLDQAAPYVEDFASKIASDDLQLYYQMGLHA 332 Query: 327 -------AEGERAIAQAIVYL 340 + + A++ + Sbjct: 333 RRDLEWAPSPRQGLEMALLRM 353 >UniRef50_A0JSD4 DNA polymerase III, subunits gamma and tau n=4 Tax=Micrococcineae RepID=A0JSD4_ARTS2 Length = 1078 Score = 317 bits (812), Expect = 7e-85, Method: Composition-based stats. Identities = 82/391 (20%), Positives = 132/391 (33%), Gaps = 72/391 (18%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L R RP++ A IGQ+H+ +PL A+ + H+ + GP G GKTT A ++AR Sbjct: 6 ALYRRYRPDSFADVIGQEHVT---EPLMTALRKNRVNHAYLFSGPRGCGKTTSARILARC 62 Query: 74 ANA---------------------------DVERISAVTSGVKEIREAIERARQNRNAGR 106 N +E +A GV + R+ ERA R Sbjct: 63 LNCAEGPTDTPCGKCPSCIELARGGSGSLDVIEIDAASHGGVDDARDLRERATYAPVRDR 122 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DE H + +A L +E+ I FI ATTE ++ + SR Y + Sbjct: 123 YKIFIIDEAHMVTSAGFNALLKIVEEPPEHIKFIFATTE--PDKVIGTIRSRTHHYPFRL 180 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + E + L +++ + + G R +L+ L+ + A Sbjct: 181 VPPEPLMAYLELLCNQ-------ENVPVAPGVLSLVIRAGGGSVRDSLSVLDQLMAGA-- 231 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 G L EL + G L+ + ++V S R+I Sbjct: 232 ---GPTGLDYELAVALLGYT----------HASLLDDVVEAVAASDAATVFRAVDRVIQT 278 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRV--GPAEGERA-IAQAIVYLA 341 G DP L + + + A + + G + A + L Sbjct: 279 GHDPRRFVEDLLERFRDLI---------IVQAMPESAQSILRGMPADQIARLQNQAHNLG 329 Query: 342 CAPKSNAVYTAFKAALADARERPDYDVPVHL 372 A S A AL + +HL Sbjct: 330 AAELSRAADVT-NTALTEMTGATSPR--LHL 357 >UniRef50_C5NYK0 DNA polymerase III subunit gamma/tau n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYK0_9BACL Length = 569 Score = 316 bits (811), Expect = 8e-85, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 42/308 (13%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 FQ L + RP+ +GQ H++ L AI+ + H+ + +G GTGKT++A++ A Sbjct: 2 FQALYRKYRPQTFNDIVGQNHIV---SVLKNAIDKDQISHAYLFYGSRGTGKTSIAKIFA 58 Query: 72 RYANAD----------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKS 121 N + +E +A +GV E+R+ E + G+ + +DEVH + Sbjct: 59 NEVNGNEIYQKENVDIIEIDAASNNGVDEVRDIKEAIKFLPTEGKYKVYIIDEVHMLTTA 118 Query: 122 QQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAME 179 +A L +E+ + FI ATTE ++ + +LSR + + K+LS E + L + Sbjct: 119 AFNALLKTLEEPPAHVIFILATTE--IHKIPATILSRCQRFEFKNLSQEQLIDRLKYIAK 176 Query: 180 DKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTE 239 + +++V+ + IA L G R A++ L+ +++ AE + + E Sbjct: 177 E-------ENLVIEEAAIEKIATLAKGGLRDAISILDQVSNYAEE-------ITLNHILE 222 Query: 240 IAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIA 299 + S D I ++ + +L Y + D + + + Sbjct: 223 VTSSISE----------DDILEFYRGLLQGDVTKSLLKYNEFVAQAKDTKLLLNDLINVT 272 Query: 300 SEDVGNAD 307 + V + Sbjct: 273 RDIVVYKN 280 >UniRef50_A5VIC2 DNA polymerase III, subunits gamma and tau n=39 Tax=Lactobacillales RepID=A5VIC2_LACRD Length = 611 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 72/389 (18%), Positives = 141/389 (36%), Gaps = 72/389 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP+ +GQQ + + L AI + H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVWRPQRFDDLVGQQIVT---RTLKNAIITHQISHAYLFAGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N +E +A +GV+EIR+ ++A+ Sbjct: 58 FAKAVNCHHSKDGEPCNECEICKAITNGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH + +A L +E+ + FI ATTE ++ ++SR + + Sbjct: 118 ADYKVYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTE--PHKIPLTIISRVQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + +S ED + ++ K + ++ IA G R AL+ L+ + + Sbjct: 176 RRISAEDAFNRMKYILDQK-------KVTYDEKALWVIANAAEGGMRDALSILDQVLSFS 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + +K + + G + + K ++ IS AL I+ Sbjct: 229 DNE------VKLDDALLVTGSVTKQLLKK---YFLEISK-------HEGATALDTMKDIL 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAA---WDCFTRVGPAEGERAIAQAIVY 339 G D ++ + + + ++ + + F + V Sbjct: 273 DEGKDGQRFIEDLISFIRDILLYQESPSLISVESTGLKQEDFEEI-------------VQ 319 Query: 340 LACAPKSNAVYTAFKAALADARERPDYDV 368 LA + + + R DV Sbjct: 320 LASSATLYRMIDELNNIQEEMRFTTHPDV 348 >UniRef50_Q5QWS2 DNA polymerase III, gamma/tau subunits n=1 Tax=Idiomarina loihiensis RepID=Q5QWS2_IDILO Length = 681 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 62/340 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP A+ +GQQH+L KPL A++ LH + G G GKTT+A + Sbjct: 1 MSYQVLARKWRPSQFAEVVGQQHVL---KPLEHALDKQRLHHAYLFTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A + V++ RE ++ + Sbjct: 58 LAKALNCEEGITATPCGKCSACLEIEQGRFVDLLEIDAASRTKVEDTRELLDNVQYRPTR 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH ++ +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTD--PQKLPVTILSRCLQFNL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K+LS +DI Q L+ + + + E +A G R AL+ + Sbjct: 176 KALSNDDITQQLSYVLSQ-------EQVQADSEALPLLARSARGSMRDALSLTDQAIA-- 226 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G + + + + G I+AL +SV +A + ++ Sbjct: 227 ----QGGGSVSIDSVRRMLGNVPVAD----------IAALLESVLEGDAEAVMQRVDSMV 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFT 322 + D V ++ + +Q +A + F Sbjct: 273 SMVPDLSSVLVELQSLLHQL------ALVQQVPSAANVFE 306 >UniRef50_D2QBB5 DNA polymerase III, subunits gamma and tau n=5 Tax=Bacteria RepID=D2QBB5_9SPHI Length = 664 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 122/337 (36%), Gaps = 56/337 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 F A + RP +GQ+H+ L AI+ HL + + GP G GKTT A ++ Sbjct: 3 NFVVSARKYRPATFDTVVGQEHIT---TTLKNAIKTNHLASAFLFCGPRGVGKTTCARIL 59 Query: 71 ARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A + V++IR I++ R + Sbjct: 60 AKTINCQNLTAEGEACDACESCVSFNQNASFNIHELDAASNNSVEDIRNLIDQVRYPPQS 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ I +DEVH + + +AFL +E+ FI ATTE ++ +LSR +++ Sbjct: 120 GKYKIYIIDEVHMLSSAAFNAFLKTLEEPPTYAIFILATTE--KHKILPTILSRCQIFDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + + I L + + I E IA+ +G R AL+ ++ A Sbjct: 178 NRIQPQHIANHLAGIAQK-------EGITAETEALDLIAQKADGGLRDALSMFDLNVTFA 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 R+++ + + + YD L + +L I+ Sbjct: 231 -----ADRIIRYKEVLDNLHILD----------YDYYFKLTDLLLAGKLPQSLLTVDEIL 275 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 G D + + D +Q+ + Sbjct: 276 RKGFDGHQFIVGLCRHFRDLLVCKDAATVQLLQVTEN 312 >UniRef50_C4LVU1 AAA family ATPase, putative n=2 Tax=Entamoeba RepID=C4LVU1_ENTHI Length = 429 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 122/375 (32%), Positives = 198/375 (52%), Gaps = 24/375 (6%) Query: 3 NLSLDFSDNTFQPLAARMRPENLAQYIGQ----QHLLAAGKPLPRAIEAGHLHSMILWGP 58 NL +FS TF LA R RP+ + +GQ ++ L G + SMI +GP Sbjct: 17 NLKTEFSS-TFGTLAERRRPQKIEDVVGQLKVRDDIIHQVTVL------GRVDSMIFFGP 69 Query: 59 PGTGKTTLAEVIARYANADVERISAV---TSGVKEIREAIERARQNRNAGRRTILFVDEV 115 PG GKTT ++I R+ + T+ VK+ ++ I + + +TI+F+DE+ Sbjct: 70 PGCGKTTFCKLIKRHFEKSFIELDGNSINTNIVKDFKKGIIK-KNKETTHSQTIIFIDEI 128 Query: 116 HRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLT 175 H + + Q+ + I++ TI IG TT+ PSF L+ LL RV +L+ L+ +++++ Sbjct: 129 HCISSTVQNFLIDLIKEKTICLIGTTTQVPSFCLSKELLLFMRVIVLERLNEVSVKEIIK 188 Query: 176 QAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE 235 +A+ + Y ++ DE I E +GD R ALN LE + AE++ + +K Sbjct: 189 RAINAEYSKY-----IVSDEVIDKIVESSDGDGRMALNNLEKLIQCAELEKVNEVSIKF- 242 Query: 236 LLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC 295 + E+ G+R+ +D +GD Y+LISA KS+RGS DA++YW R+I +G Y+ RR Sbjct: 243 -VHEVIGKRALNYDKRGDEHYNLISAFQKSIRGSDEDASVYWLERMILSGEKLSYITRRM 301 Query: 296 LAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKA 355 L IASED+G AD A V +G + + + + ++YLA A KSN + Sbjct: 302 LRIASEDIGMADTSATTVISNVAYAVDVLGYPDCKCCLLEGVLYLARARKSN--FLDVLD 359 Query: 356 ALADARERPDYDVPV 370 +L + ++ Y VP+ Sbjct: 360 SLGRSLKKQQYSVPL 374 >UniRef50_Q7NXL6 DNA polymerase subunits gamma and tau n=2 Tax=cellular organisms RepID=Q7NXL6_CHRVO Length = 639 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 66/304 (21%), Positives = 125/304 (41%), Gaps = 56/304 (18%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP+ A +GQ+H++ + L A++ LH +L G G GKTT+A + Sbjct: 1 MSYQVLARKWRPKRFADLVGQEHVV---RALSNALKEQRLHHAYLLTGTRGVGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + +E +A +G+ IRE +E A+ Sbjct: 58 LAKSLNCETGTTAEPCGECQACRQIDSGRFVDLLEIDAASNTGIDNIREVLENAQYAPTM 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH +KS +A L +E+ + FI ATT+ ++ +LSR + L Sbjct: 118 GRFKVYIIDEVHMLSKSAFNAMLKTLEEPPGHVKFILATTD--PQKVPVTVLSRCLQFSL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 ++++ + + L ++ + I + +G R A + L+ Sbjct: 176 RNMTPQQVSSHLAHMLD-------IEGIHYEAPALALLGRAASGSMRDAQSLLDQAIAY- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 G +K + + + G R+ + L +++ S A + R+ Sbjct: 228 -----GLGEVKEDGVRAMLGAVDRRY----------LFTLLQALAASDGPALMAEADRLA 272 Query: 283 TAGG 286 G Sbjct: 273 ERGV 276 >UniRef50_A2A0B1 DNA polymerase III subunit gamma/tau n=1 Tax=Microscilla marina ATCC 23134 RepID=A2A0B1_9SPHI Length = 575 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 66/331 (19%), Positives = 127/331 (38%), Gaps = 56/331 (16%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 F A + RP +GQ H+ L AI++ L + + GP G GKTT A ++ Sbjct: 3 NFVVSARKYRPATFDTVVGQSHIT---TTLKNAIKSNQLAQAFLFCGPRGVGKTTCARIL 59 Query: 71 ARYANA--------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 A+ N E +A ++ V +IR +++ R + Sbjct: 60 AKTINCLTPTEDFEACGTCESCVSFQNQGSMNVYELDAASSNSVDDIRNLVDQVRYPPQS 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+R + +DEVH + S +AFL +E+ + FI ATTE ++ +LSR +++ Sbjct: 120 GKRKVYIIDEVHMLSNSAFNAFLKTLEEPPEYVIFILATTE--KHKIIPTILSRCQIFDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K + +D+ L + ++I + IA+ +G R AL+ +++ + Sbjct: 178 KRIEVKDMSGHLANIAQK-------EEIEAEQDALDLIAQKADGGLRDALSLFDLITTFS 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 R + + + + +D + ++ L ++ I+ Sbjct: 231 -----ADRHITYQSVVKNLHILD----------HDYYFKITDALLAQDMPLVLLYFDEIL 275 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D A + DP +++ Sbjct: 276 RKGFDGHIFIAGLGAHLRNVMMCKDPATVKL 306 >UniRef50_B8CZX2 DNA polymerase III, subunits gamma and tau n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZX2_HALOH Length = 588 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 80/388 (20%), Positives = 142/388 (36%), Gaps = 68/388 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 F L + RP+N +GQ H++ + L A+E+G + H+ + GP GTGKT+ A+V Sbjct: 1 MGFLSLYRKYRPQNFNDLVGQHHVV---RTLKNALESGRIAHAYLFAGPRGTGKTSTAKV 57 Query: 70 IARYANA-------------------------DVERISAVTSGVKEIREAIERARQNRNA 104 A N +E +A G+ EIRE E+ + N Sbjct: 58 FAMALNCIHGPTTEPCGQCENCRKIQKGQSIDVIEIDAASNRGIDEIRELREKVKFYPNE 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G + +DEVH K +A L +E+ + FI ATTE ++ + +LSR + + Sbjct: 118 GEYKVYIIDEVHMLTKGAFNALLKTLEEPPEKVVFILATTE--PHQVINTILSRCQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 L +I++ L E + + + +A NG R A++ L+ Sbjct: 176 SLLPVREIQERLRYICEKEEVEFEEE-------ALNILARSANGGLRDAISLLDQAISYT 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + L P + + G+ S +++S K V AL RII Sbjct: 229 GNN------LNPIDVQGMLGKVSR----------EVLSQFIKYVLNGNSVEALKLVNRII 272 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLAC 342 + G + + + + + + + + + + A Sbjct: 273 SRGNNVGRLIGDLIEYGRQLL---------LVKECGPDSRIIEYPDE--VLEKISGE-AR 320 Query: 343 APKSNAVYTAFKAALADARERPDYDVPV 370 A K++ + R+ D P Sbjct: 321 AIKTSRLIEIIDQLTVMERDIKYSDEPR 348 >UniRef50_Q1QXJ7 DNA polymerase III, tau subunit / DNA polymerase III, gamma subunit n=2 Tax=Gammaproteobacteria RepID=Q1QXJ7_CHRSD Length = 723 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 65/383 (16%), Positives = 133/383 (34%), Gaps = 81/383 (21%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHS-MILWGPPGTGKTTLAEV 69 ++Q LA + RP + +GQ+H+ + L A++ G LH + G G GKTTLA + Sbjct: 1 MSYQVLARKWRPRTFHELVGQEHV---SRALVNALDQGRLHHAYLFTGTRGVGKTTLARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A + V++ RE ++ + Sbjct: 58 LAKCLNCRQGVTSVPCGECETCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 GR + +DEVH + +A L +E+ + F+ ATT+ +L +LSR + L Sbjct: 118 GRYKVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTD--PQKLPVTVLSRCLQFTL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K++ E + L+ ++ + + ++ + + +G R A++ + Sbjct: 176 KNMPPERVVGHLSHILQ-------AESVAYDEQALWLLGKAADGSMRDAMSLTDQAIAFG 228 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + ++ + + G R + L A + Sbjct: 229 QGE------VRHADVAAMLGTLDHRHLLALAEALAEV----------DAARVLQEVASLA 272 Query: 283 TAGGDPLYVARRCLAIASED-VGNADPRAMQ---------VAIAAWDCFTRVGP------ 326 G D + I + P A+ + +AA V Sbjct: 273 EQGPDFGGILDDLAGIFHRLAIAQMVPDALDNGHGDRDTLLPLAARFTAEDVQLYYQIAL 332 Query: 327 ---------AEGERAIAQAIVYL 340 + A+ ++ + Sbjct: 333 QGRGDMESAPDPRTALEMTLLRM 355 >UniRef50_C8W8W3 DNA polymerase III, subunits gamma and tau n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W8W3_ATOPD Length = 755 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 132/341 (38%), Gaps = 62/341 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ Q +GQ+H++ L RA+ L H+ + GP GTGKTT+A ++A Sbjct: 1 MESLYTKYRPQTFEQVVGQKHVVG---TLKRAVLEQKLSHAYLFCGPRGTGKTTMARLLA 57 Query: 72 RYANAD-------------------------VERISAVTSGVKEIRE-AIERARQNRNAG 105 + E +A +GV +RE I RA G Sbjct: 58 KAILCHEAPGHLPDGTCEDCQLIAAGQHPDVFEIDAASNTGVDNVREEIISRASYAPVCG 117 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + +A L +E+ +TFI TT+ ++ + +LSR + + + Sbjct: 118 KGKVYIIDEVHMLTSAAFNALLKTLEEPPSHVTFIMCTTD--PQKILATILSRVQRFDFR 175 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 S++ +++ + L ++ + D I G R AL++LE ++ Sbjct: 176 SIAADEMAEHLISVCKN-------EGFTYEDAAIDLIVRYARGGMRDALSSLEQLSVY-- 226 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 G V+ + + ++ G+ S LI++ ++ + + Sbjct: 227 ----GGGVISEQTVRDVLGQSSGS----------LINSAALALAQRDISSLFTTVNTLFE 272 Query: 284 AGGDPLYVARRCLAIASED-----VGNADPRAMQVAIAAWD 319 G D L R A + VG P + + Sbjct: 273 GGKDLLQFTRELAAHVRDLYVATAVGVDSPALANSSASTEQ 313 >UniRef50_C5PXF7 DNA polymerase III, tau and gamma subunits n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PXF7_9SPHI Length = 596 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 125/331 (37%), Gaps = 57/331 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 F A + RP +GQQH+ L AI L + + GP G GKTT A ++ Sbjct: 3 NFIVSARKYRPVTFDSVVGQQHITG---TLKNAIHNNQLAQAFLFCGPRGVGKTTCARIL 59 Query: 71 ARYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNA 104 A+ N + E +A + V +IR I++ R + Sbjct: 60 AKTINCEHITSEVEACGVCDSCKSFQNGNSFSIHELDAASNNSVDDIRNLIDQVRIPPQS 119 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 G+ I +DEVH ++ +AFL +E+ FI ATTE ++ +LSR +++ Sbjct: 120 GKYKIYIIDEVHMLSQQAFNAFLKTLEEPPSYAIFILATTE--KHKILPTILSRCQIFDF 177 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 + ED+ + L E + + + IA+ +G R AL+ + + + Sbjct: 178 NRIRVEDMARHLAGIAEK-------EVVTYDLDGLHIIAQKADGGLRDALSMFDQIVSFS 230 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 S + V+ + + YD L ++ +L + +++ Sbjct: 231 NKQISYQSVIDNLNILD----------------YDYYFKLTDAILQEEAAESLLIFDQVL 274 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQV 313 G D + + + +P +++ Sbjct: 275 NRGFDGNHFIGGLSSHLRNLLVTKEPATLKL 305 >UniRef50_Q3B0U5 DNA polymerase III, tau subunit n=14 Tax=Cyanobacteria RepID=Q3B0U5_SYNS9 Length = 625 Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 59/327 (18%) Query: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAE 68 +T+QPL + RP+ Q +GQ+ + A L A+ + + + + GP GTGKT+ A Sbjct: 2 SSTYQPLHHKYRPQRFDQLVGQEAITA---TLGNALTSNRIAPAYLFSGPRGTGKTSSAR 58 Query: 69 VIARYANAD---------------------------VERISAVTSGVKEIREAIERARQN 101 ++AR N +E +A +GV IRE IER+R Sbjct: 59 ILARSLNCQNSDGPTPEPCGTCDLCRTIASGTALDVIEIDAASNTGVDNIRELIERSRFA 118 Query: 102 RNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARV 159 R + VDE H + + +A L +E+ + F+ ATT+ + +LSR + Sbjct: 119 PVQARWKVYVVDECHMLSTAAFNALLKTLEEPPPQVVFVLATTD--PQRVLPTILSRCQR 176 Query: 160 YLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA 219 + + + + +EQ LT E + I + E +A+ G R A + L+ ++ Sbjct: 177 FDFRRIPLDALEQHLTWIAEQ-------ESIAIQPEAIHVVAQRSQGGLRDAESLLDQLS 229 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 + ++ + ++ G + AL +++ S P A L Sbjct: 230 LL-------PPPIEANAVWDLLGAVPE----------QELLALAQAMTSSEPVALLEATR 272 Query: 280 RIITAGGDPLYVARRCLAIASEDVGNA 306 ++ G DP V + + + V A Sbjct: 273 NLLDRGRDPGAVLQGLAGVLRDLVLMA 299 >UniRef50_A9GQB3 DNA polymerase III subunit Tau n=2 Tax=Myxococcales RepID=A9GQB3_SORC5 Length = 829 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 78/350 (22%), Positives = 129/350 (36%), Gaps = 62/350 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++ LA + RP++ +GQ+H+ L AI + H+ + G G GKTT A + Sbjct: 37 MSYVVLARKWRPQSFEDLVGQEHV---STTLANAIARDRVAHAFLFTGVRGVGKTTSARI 93 Query: 70 IARYANADV-------------------------ERISAVTSGVKEIREAIERARQNRNA 104 +A+ N E A +GV E+R+ E Sbjct: 94 LAKALNCVHGPTATPCQTCAPCAEITVGADVDVQEIDGASYNGVDEVRKLQESLPYRPAR 153 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLL 162 R I VDEVH + + +AFL +E+ + FI ATTE ++ +LSR + Y Sbjct: 154 DRFKIFIVDEVHMLSNAAWNAFLKTLEEPPPHVKFIFATTE--VHKVPVTILSRCQRYDF 211 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K + + I L ++ + I D A+A G R A++ L+ + Sbjct: 212 KLIGAQAIAARLRWVLDQ-------EKIPADDPALSALAREAAGSMRDAMSLLDQVIAWV 264 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + E + ++ G ++ L ++ P A + + Sbjct: 265 GTSGD---RITAEGVAKVLGVADRV----------VLHRLAGALVDGDPAACVRIVGELA 311 Query: 283 TAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERA 332 G D +VAR LA + V VA D + A+ E A Sbjct: 312 QEGYDLPHVARDFLAHLRDLV---------VAKVCEDPAPLLDLADEEVA 352 >UniRef50_D1PBF2 DNA polymerase III, gamma and tau subunit n=1 Tax=Prevotella copri DSM 18205 RepID=D1PBF2_9BACT Length = 638 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 126/336 (37%), Gaps = 57/336 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + A + RP +GQ L L A+++G L H+ + GP G GKTT A + A Sbjct: 4 YIVSARKYRPMTFDSVVGQSALT---TTLKNAVKSGKLAHAYLFCGPRGVGKTTCARIFA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N + E +A +GV +I+ +E+ R G Sbjct: 61 KAINCEHPREDGEACNECESCRAFNEQRSYNIFELDAASNNGVDQIKVLMEQTRIPPQVG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + + +DEVH + + +AFL +E+ + FI ATTE ++ +LSR ++Y + Sbjct: 121 KYKVFIIDEVHMLSTAAFNAFLKTLEEPPQHVIFILATTE--KHKILPTILSRCQIYDFE 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 ++ + L E + I ++ IAE +G R AL+ + A Sbjct: 179 RMTVANTINHLKMVAEK-------EGIQYEEQALAVIAEKADGGMRDALSIFDQAASFCM 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + ++V++ + + D L + + I+ Sbjct: 232 GNITYQKVIEDLNVLDS----------------DNYFRLVDLALENKVAEMMVTLDGILN 275 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWD 319 G D + + + DP+ + + + D Sbjct: 276 RGFDGGNMIQGLAQHVRNVMMAKDPQTLPLLETSDD 311 >UniRef50_UPI00017455DA DNA polymerase III, gamma and tau subunits n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017455DA Length = 676 Score = 314 bits (804), Expect = 6e-84, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 125/328 (38%), Gaps = 57/328 (17%) Query: 12 TFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVI 70 ++Q A + RP +GQ H++ + L AI L H+ + GP GTGKT+ A + Sbjct: 16 SYQVFARKYRPRTFEDVLGQDHVV---RTLRNAIAQNRLAHAYLFVGPRGTGKTSTARIF 72 Query: 71 ARYANAD------V-------------------ERISAVTSGVKEIREAIERARQNRNAG 105 A+ N E A +GV+++RE E + Sbjct: 73 AKALNCPNGPRVDFDPDDEVCVEIEKGISLDVREIDGASNNGVEQVRELREEVKFAPTRC 132 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 R I ++DEVH + + +A L +E+ + FI ATTE + ++ ++SR + + L+ Sbjct: 133 RYKIYYIDEVHMLSTAAFNALLKTLEEPPEHVKFIFATTE--AHKVLPTIISRCQRFDLR 190 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + I + L + + L ++ AIA+ G R A + L+ + Sbjct: 191 RIPAGLIAKHLLHIAT-------LEKVALSEKAAYAIAKGAEGGMRDAQSMLDQLVAFCG 243 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 ++ + + +I G +G+ +L + + AL Sbjct: 244 ------ERIEEQDVLDIFGFT------RGETVANLAARVLD----RDTVGALKELHSQAD 287 Query: 284 AGGDPLYVARRCLAIASEDVGNA-DPRA 310 G D + + + + DP A Sbjct: 288 TGKDLGRLLTDLIQHFRTLLVHQVDPAA 315 >UniRef50_Q3A8S0 Putative DNA polymerase III, gamma/tau subunits n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A8S0_CARHZ Length = 511 Score = 313 bits (803), Expect = 7e-84, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 123/316 (38%), Gaps = 57/316 (18%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + L + RP+ ++ +GQ+ ++ K L A+ + H+ + GP GTGKTT A+V+A Sbjct: 2 YLALYRKWRPKTFSEIVGQETIV---KILKNAVATMQVAHAYLFSGPRGTGKTTTAKVLA 58 Query: 72 RYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 + N + E +A G+ EIRE E + G+ Sbjct: 59 KAVNCEHPVEGEPCNQCPSCIGINNQSLLNVFEIDAASNRGIDEIRELRESIKLVPAQGK 118 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DEVH +A L +E+ + FI ATTE ++ ++SR + + K Sbjct: 119 YKVYIIDEVHMLTNEAFNALLKTLEEPPEHVIFILATTE--FNKVPVTIVSRCQRFDFKR 176 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 +ST+ I + L E + + E IAE G R AL+ ++ + Sbjct: 177 ISTKTIWEHLKNIAEK-------EKLQYEAEALHLIAEASEGGLRDALSLMDQILVF--- 226 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 + E ++ G S R I L ++R + + A ++ Sbjct: 227 ----NPKITVEDTLKVLGFVSWRK----------ILELISAIRENNQLKIINEIAEVVER 272 Query: 285 GGDPLYVARRCLAIAS 300 G D ++ L Sbjct: 273 GLDVKLFVQQILQYVR 288 >UniRef50_C7NGE4 DNA polymerase III, subunit gamma/tau n=2 Tax=Micrococcineae RepID=C7NGE4_KYTSD Length = 796 Score = 313 bits (803), Expect = 8e-84, Method: Composition-based stats. Identities = 68/377 (18%), Positives = 127/377 (33%), Gaps = 65/377 (17%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L R RP+N ++ +GQ+H+ L +A+ G + H+ + GP G GKTT A ++AR Sbjct: 4 ALYRRYRPQNFSEVVGQEHVTGP---LQQALRTGRVNHAYLFSGPRGCGKTTSARILARC 60 Query: 74 ANAD---------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 N + +E +A GV + R+ E+A R Sbjct: 61 LNCEQGPTDSPCGECDSCQDLARGGAGSVDVIEIDAASHGGVDDARDLREKASFGPAQSR 120 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKS 164 + +DE H + +A L +E+ + FI ATTE ++ + SR Y + Sbjct: 121 YKVYIIDEAHMVTSAGFNALLKIVEEPPEHVLFIFATTE--PEKVIGTIRSRTHHYPFRL 178 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + +++ L Q E + I + + G R +++ L+ + Sbjct: 179 VPPAVLQEYLAQVCER-------EGITVEPGVLSYVVRAGGGSVRDSMSVLDQLIA---- 227 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 S + T + G + +L+ + + + R++ + Sbjct: 228 -GSDDAGITLAGTTALLGFTDS----------ELLDGVVDAYAAGDGASLFTTVERVVES 276 Query: 285 GGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGER-AIAQAIVYLACA 343 G DP + + + A+ G + + L A Sbjct: 277 GQDPRRFVEDLSERMRDLI-------LVNAVPTGTEAVLPGVPSDQLDRLRVQASGLGPA 329 Query: 344 PKSNAVYTAFKAALADA 360 S A F Sbjct: 330 ELSRASDVLFHGLAEMT 346 >UniRef50_B6YRS0 DNA polymerase III gamma and tau subunit n=2 Tax=Bacteroidales RepID=B6YRS0_AZOPC Length = 471 Score = 313 bits (803), Expect = 8e-84, Method: Composition-based stats. Identities = 78/379 (20%), Positives = 140/379 (36%), Gaps = 67/379 (17%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 + A R RP +GQ+ L+ L AI+ L H+ + GP G GKTT A + A Sbjct: 4 YIVSARRYRPATFQSVVGQRPLI---TTLKNAIQNSKLAHAYLFCGPRGVGKTTCARIFA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N E +A + V+ IR E+ R G Sbjct: 61 KTINCTCLKEDGEACNECDFCQSFNENRSHNIYELDAASNNSVENIRFLTEQMRIPPQIG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLK 163 + +DEVH + S +AFL +E+ FI ATTE +++ +LSR ++Y Sbjct: 121 HYKVYIIDEVHMLSTSAFNAFLKTLEEPPHHAMFILATTE--KYKIIPTILSRCQIYDFS 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 ++ DI + L ++ ++I E IA+ +G R AL+ + +A + Sbjct: 179 RITINDIVEYLEYIAQN-------ENISTEREALNIIAQKADGGMRDALSIFDRVASFSA 231 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 + + + V++ + + Y+ L +++ +L +II Sbjct: 232 NNITYQSVIENLNVLD----------------YEYYFRLVEAILIGDVSCSLLILNKIIR 275 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA-QAI---VY 339 G D V + + DP+ + + E ++ Q +Y Sbjct: 276 KGFDLQQVIVGLSDFFRDIMVCKDPQTIVLFEIGDSAIR-----EKYLNLSKQCTSDFLY 330 Query: 340 LACAPKSNAVYTAFKAALA 358 A SN ++ + Sbjct: 331 NAL-ELSNECDLNYRYSKN 348 >UniRef50_C0QAH1 DnaX n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAH1_DESAH Length = 590 Score = 313 bits (802), Expect = 9e-84, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 137/362 (37%), Gaps = 57/362 (15%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 +++ LA + RP+ + +GQ H+ L AI +G + H+++L GP GTGKTT+A + Sbjct: 1 MSYRVLALKYRPQTFDEVVGQPHVT---TTLKNAILSGRVPHAILLTGPRGTGKTTIARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N + E A + V ++RE E ++ Sbjct: 58 LAKAMNCETGPTPTPCNICKTCTNITAGSAVDVFEIDGASNNSVDQVRELRENVAYMPSS 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + I +DEVH + + +A L +E+ + FI ATTE ++ +LSR + + L Sbjct: 118 SKFKIYIIDEVHMLSMAAFNALLKTLEEPPDHVIFIFATTE--VHKIPVTILSRCQRHDL 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMA--- 219 +S I L + + E+ +A +G R +L+ L+ + Sbjct: 176 GRISLAQISAHLMTLA-------AAEGFSISQESCDLLAGEADGSMRDSLSLLDRILGSQ 228 Query: 220 DMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYA 279 SG R + + + G +DL A+ ++ RG+ + Sbjct: 229 AQTSEQTSGPRAIDDDKILGTLGII------DKTLVFDLADAIIQN-RGADI---IDLVD 278 Query: 280 RIITAGGDPLYVARRCLAIASED----VGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQ 335 RI T G D + V + D ++ + + + Q Sbjct: 279 RIHTLGLDLKRFYASLIRHFRNLAVVKVSSNDKNTCDISDHDRQRMAALTAPLSQSFLNQ 338 Query: 336 AI 337 + Sbjct: 339 IL 340 >UniRef50_D2PUL3 DNA polymerase III, subunits gamma and tau n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PUL3_9ACTO Length = 1113 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 117/342 (34%), Gaps = 60/342 (17%) Query: 15 PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARY 73 L R RPE A+ IGQ H+ A L A+ + H+ + GP G GKTT A ++AR Sbjct: 16 ALYRRYRPETFAEVIGQDHVTAP---LRNALSNNRVNHAYLFSGPRGCGKTTSARILARA 72 Query: 74 ANAD---------------------------VERISAVTSGVKEIREAIERARQNRNAGR 106 N + +E +A GV + R+ ERA R Sbjct: 73 INCEKGPIAQPCGVCKSCTDLARGGPGSIDVIEIDAASHGGVDDARDLRERAFFAPVESR 132 Query: 107 RTILFVDEVHRFNKSQQDAFLPHIED--GTITFIGATTENPSFELNSALLSRARVYLLKS 164 I +DE H +A L +E+ + FI ATTE ++ + SR Y + Sbjct: 133 YKIYIIDEAHMVTTQGFNALLKLVEEPPPHLKFIFATTE--PDKVIGTIRSRTHHYPFRL 190 Query: 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEV 224 + + + + E + + + + G R +L+ L+ + Sbjct: 191 VPPKVLGDYMATLCE-------AEGVAIAPAALPLVVRAGAGSVRDSLSVLDQLI----- 238 Query: 225 DDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITA 284 +G + EL + G L+ A A ++I Sbjct: 239 GGAGPEGVTYELAVALLGFTP----------DSLLDACVDGFAAHDSRAVFETVEKVIET 288 Query: 285 GGDPLYVARRCLAIASEDVGN-ADPRAMQVAIAAWDCFTRVG 325 G DP A L + V A P A VA + G Sbjct: 289 GQDPKRFAEDLLRRLRDLVILSAVPNA--VASGLIEAAEDQG 328 >UniRef50_B1GZS6 DNA polymerase III subunit gamma/tau n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS6_UNCTG Length = 531 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 117/318 (36%), Gaps = 56/318 (17%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 + LA + RP+N + +GQ+H+ + L +I + H+ + GP G GKTT+A + Sbjct: 1 MAYLVLARKFRPQNFDEVVGQEHI---SQTLKNSISEKRIAHAYLFSGPRGCGKTTMARI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E A +G+ +IR E + + + Sbjct: 58 LAKALNCKNGPTIKPCGVCENCVEISKSSSVDVLEIDGASNNGIDDIRVLRENVKFSTAS 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLL 162 + I +DE H+ +A L +E+ + FI ATTE ++ +LSR + Y Sbjct: 118 SKYKIYIIDEAHQITAQAFNALLKTLEEPPAHVIFIMATTEQ--HKIPITILSRCQRYRF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 K +S ++ + + + DE + G R AL+ L+ Sbjct: 176 KLISGAEMVCAIKSI-------GQEEGFEIDDEALNIVTSASGGSMRDALSLLDQAVS-- 226 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 S + + + + G D+I ++ ++ A L I Sbjct: 227 ----SNTGRITGDYMRGLLGLLPK----------DIIVSVTDNIAKGDIHAILKIVKEIY 272 Query: 283 TAGGDPLYVARRCLAIAS 300 G + L AR Sbjct: 273 EQGYNILQFARDLREHLR 290 >UniRef50_C4FVD6 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FVD6_9FIRM Length = 655 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 67/345 (19%), Positives = 126/345 (36%), Gaps = 58/345 (16%) Query: 11 NTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEV 69 ++Q L RP++ + +GQ + + L A++ L H+ + GP GTGKT+ A++ Sbjct: 1 MSYQALYRVWRPQSFDELVGQPLI---AETLKNAVKNQQLSHAYLFTGPRGTGKTSAAKI 57 Query: 70 IARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNA 104 +A+ N +E +A +GV+EIR+ ++ R + Sbjct: 58 LAKAVNCPHQTDGNPCNQCELCQAITAGQLSDVIEIDAASNNGVEEIRDLRDKVRYAPSQ 117 Query: 105 GRRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLL 162 + +DEVH +A L +E+ + FI ATTE ++ + ++SR + + Sbjct: 118 ATYKVYIIDEVHMLTTGAFNALLKTLEEPPAQVLFILATTE--PHKIPATIISRTQRFDF 175 Query: 163 KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMA 222 +S D+ + +E I E IA NG R +L+ L+ Sbjct: 176 GRISQADLVGRMQYILEQD-------GIDFEAEALAVIARAANGGMRDSLSLLDQALSY- 227 Query: 223 EVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARII 282 + + + E+ G S + D ++AL AL + Sbjct: 228 -----NRSAVTVQSALEVTGSLSQLV------YIDYLTALQ----AQDGPKALSILQASL 272 Query: 283 TAGGDPLYVARRCLAIASEDV--GNADPRAMQVAIAAWDCFTRVG 325 G + + + N+ + A + G Sbjct: 273 QEGKQANRFVEELILFCRDLLLTLNSKDNFTLLTEAELKPLRQAG 317 >UniRef50_C6W6R9 DNA polymerase III, subunits gamma and tau n=3 Tax=Sphingobacteriales RepID=C6W6R9_DYAFD Length = 621 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 69/337 (20%), Positives = 120/337 (35%), Gaps = 56/337 (16%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP +GQ H+ L AI HL + + GP G GKTT A ++A Sbjct: 4 FVVSARKYRPVTFDSVVGQSHIT---TTLKNAIRTNHLAQAFLFCGPRGVGKTTCARILA 60 Query: 72 RYANAD--------------------------VERISAVTSGVKEIREAIERARQNRNAG 105 + N E +A + V++IR I++ R G Sbjct: 61 KTINCQNLGDDVEACGECESCVSFQNNASFNIHELDAASNNSVEDIRNLIDQVRYPPQTG 120 Query: 106 RRTILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLK 163 + I +DEVH +++ +AFL +E+ FI ATTE ++ +LSR +++ Sbjct: 121 KYKIYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTE--KHKILPTILSRCQIFDFN 178 Query: 164 SLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAE 223 + ++DI L + + I E I + +G R AL+ ++ + Sbjct: 179 RIQSKDIAHHLLDIAKK-------EGINAEHEALELIGQKADGGLRDALSMFDLNVTFS- 230 Query: 224 VDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIIT 283 L + E YD + ++ + +L + I+ Sbjct: 231 ----TNNHLTYAAVLENLHILD----------YDYYFKITDALTAGSIARSLVLFDEILR 276 Query: 284 AGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDC 320 G D L + DP + + + Sbjct: 277 KGFDGHLFVVGLLEHFRNLLVCKDPATVTLLQVSESA 313 >UniRef50_C7M8P5 DNA polymerase III, subunits gamma and tau n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M8P5_CAPOD Length = 569 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 129/325 (39%), Gaps = 45/325 (13%) Query: 13 FQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIA 71 F A + RP++ +GQQ + L AIE HL +++ GP G GKTT A ++A Sbjct: 4 FIVSARKYRPQSFRDVVGQQAITN---TLLNAIENNHLAQALLFTGPRGVGKTTCARILA 60 Query: 72 RYANAD--------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHR 117 + N E +A + V +IR+ IE+ R G+ + +DEVH Sbjct: 61 KKINEQTSGVEDENDFAFNVFELDAASNNSVDDIRKLIEQVRIPPQVGKYKVYIIDEVHM 120 Query: 118 FNKSQQDAFLPHIEDG--TITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLT 175 + + +AFL +E+ FI ATTE ++ +LSR +++ K ++ DI + L Sbjct: 121 LSTAAFNAFLKTLEEPPKHAIFILATTE--KHKIIPTILSRCQIFDFKRITINDIREYLK 178 Query: 176 QAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE 235 E Q I DE + IA+ +G R AL+ + + + + + + Sbjct: 179 YIAEQ-------QGIEAEDEALQIIAQKADGAMRDALSIFDRVVSFSGEKITRQATSEIL 231 Query: 236 LLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRC 295 + + Y++ + + + L + I G D + Sbjct: 232 NVLD----------------YEVYFKVTDLILDNKLPELLIAFNDSIAQGFDGNHFIAGL 275 Query: 296 LAIASEDVGNADPRAMQVAIAAWDC 320 + + + +P + + + Sbjct: 276 ASHFRDLMVCKNPTTISLMEVGEET 300 >UniRef50_C9RAG1 DNA polymerase III, subunits gamma and tau n=1 Tax=Ammonifex degensii KC4 RepID=C9RAG1_AMMDK Length = 427 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 86/386 (22%), Positives = 147/386 (38%), Gaps = 78/386 (20%) Query: 14 QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIAR 72 Q L RP+ AQ +GQ H+ + L A+ G + H+ + GP GTGKT+ A ++A+ Sbjct: 5 QALYRAWRPQQFAQVVGQAHVT---RTLRNALAMGRIAHAYLFAGPRGTGKTSTARILAK 61 Query: 73 YANA-------------------------DVERISAVTSGVKEIREAIERARQNRNAGRR 107 N +E +A G+ E+RE ER R + R Sbjct: 62 ALNCLQGPTPVPCDTCPQCLSIMEGTSLDVLEIDAASRRGIDEMRELRERVRLSPVHSRY 121 Query: 108 TILFVDEVHRFNKSQQDAFLPHIEDGT--ITFIGATTENPSFELNSALLSRARVYLLKSL 165 + +DE H +A L +E+ + FI ATTE ++ +LSR + + + L Sbjct: 122 KVYIIDEAHMLTSEAANALLKTLEEPPPQVVFILATTE--PHKIPVTILSRCQRFDFRRL 179 Query: 166 STEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVD 225 T IE+ L + E + + E R +A+ G R AL+ L+ AE + Sbjct: 180 PTALIEEHLARVAETFP-------VKVEREALRLLAQAAEGSMRDALSLLDQALAWAEGE 232 Query: 226 DSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAG 285 L+ + ++ G+ ++ + + ++ AL I G Sbjct: 233 ------LRAIDVADLLGKVPSQA----------LEEMLTYLQKGDLAGALRLVNEIEERG 276 Query: 286 GDPLYVARRCLAIASEDV------GNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVY 339 D R + E++ P + ++AA + QA+V Sbjct: 277 KDLNLFVRDLILRLREEILRHLREERKAPSWLLRSLAA---------------LHQALVD 321 Query: 340 LACAP-KSNAVYTAFKAALADARERP 364 + +P KS + A L+ RP Sbjct: 322 MRLSPLKSLTLELALIRLLSTEEGRP 347 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.165 0.515 Lambda K H 0.267 0.0508 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,239,239,118 Number of Sequences: 3077464 Number of extensions: 166315704 Number of successful extensions: 641041 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 4860 Number of HSP's successfully gapped in prelim test: 6283 Number of HSP's that attempted gapping in prelim test: 616445 Number of HSP's gapped (non-prelim): 16196 length of query: 447 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 315 effective length of database: 634,171,108 effective search space: 199763899020 effective search space used: 199763899020 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 95 (40.9 bits)