124 c3b85A_ Probab=98.04   E-value=4.5e-05  Score=56.39  Aligned_columns=101  Identities=21%

Q ss_pred             HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC-----CCCEEEEECCC---------CCHHHHHHHHHHHHHH
Q ss_conf             658999999976999759998798899899999999972-----99899996732---------5689999999999851
Q batch____        36 AAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA-----NADVERISAVT---------SGVKEIREAIERARQN  101 (447)
Q Consensus        36 ~~~~~L~~~i~~~~~~slLL~GPPGtGKTtlA~iIA~~l-----~~~~veinas~---------~~~~dir~ii~~a~~~  101 (447)
                      ++...+..+..++   .++++||||||||+++..++..+     ...++-+..+.         .+...++.+.......
T Consensus         8 ~Q~~av~~~~~~~---~~~i~GpaGTGKT~~~~~~~~~l~~~~~~~~il~~a~t~~A~~~l~~~~~~~~~~~~~~~l~~~   84 (187)
T c3b85A_           8 GQKHYVDAIDTNT---IVFGLGPAGSGKTYLAXAKAVQALQSKQVSRIILTRPAVEAGEKLGFLPGDPYLRPLHDALRDX   84 (187)
T ss_dssp             HHHHHHHHHHHCS---EEEEECCTTSSTTHHHHHHHHHHHHTTSCSEEEEEECSCCTTCCCCSSCCCTTTHHHHHHHTTT
T ss_pred             HHHHHHHHHHCCC---EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHC
T ss_conf             9999999984098---5999848998788999999999998199864999833337999888761885789999999730


Q ss_pred             HHCC------------------------CCCEEEEECHHHCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             2105------------------------8848998574678999999999998649956999
Q batch____       102 RNAG------------------------RRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIG  139 (447)
Q Consensus       102 ~~~~------------------------~~~VLiIDEI~~l~k~~qd~LL~~lE~g~~~lI~  139 (447)
                      ....                        ...++++||+..++..+...++..+..+...++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiDEas~~~~~~~~~~l~~~~~~~r~il~  146 (187)
T c3b85A_          85 VEPEVIPKLXEAGIVEVAPLAYXRGRTLNDAFVILDEAQNTTPAQXKXFLTRLGFGSKXVVT  146 (187)
T ss_dssp             SCTTHHHHHHHTTSEEEEEGGGGTTCCBCSEEEEECSGGGCCHHHHHHHHTTBCTTCEEEEE
T ss_pred             CCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHHCCCCCEEEEE
T ss_conf             58567777531011000000110245678768999754209999999999847999829996