386 c2v3cC_ Probab=96.48   E-value=0.0076  Score=40.23  Aligned_columns=95  Identities=22%

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHH----------------------HHH
Q ss_conf             6999759998798899899999999972---998999967325689999999999----------------------851
Q batch____        47 AGHLHSMILWGPPGTGKTTLAEVIARYA---NADVERISAVTSGVKEIREAIERA----------------------RQN  101 (447)
Q Consensus        47 ~~~~~slLL~GPPGtGKTtlA~iIA~~l---~~~~veinas~~~~~dir~ii~~a----------------------~~~  101 (447)
                      .+++..++|.||+|+||||++--+|..+   +..+.-++|-+....-+.++-.-+                      ...
T Consensus        96 ~~~p~Vi~lvG~~G~GKTTT~aKLA~~~~~~g~kv~li~aDt~R~aA~eQL~~~a~~~gvpv~~~~~~~~dp~~i~~~~i  175 (403)
T c2v3cC_          96 PKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGM  175 (403)
T ss_dssp             SSSCCCEEEECCSSSSTTHHHHHHHHHHHHHHCCEEEECCSCCCTTGGGSSHHHHHHSSCCEECCSSSCCSSSTTHHHHH
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHH
T ss_conf             67855999972688772458999999999569808999637765107999999988628926853887789899999999


Q ss_pred             HHCCCCCEEEEECHHHC--CHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             21058848998574678--99999999999864995699993
Q batch____       102 RNAGRRTILFVDEVHRF--NKSQQDAFLPHIEDGTITFIGAT  141 (447)
Q Consensus       102 ~~~~~~~VLiIDEI~~l--~k~~qd~LL~~lE~g~~~lI~aT  141 (447)
                      .......+++||-.-|.  +....+.|....+.....-+...
T Consensus       176 ~~~~~~DvIlIDTaGR~~~d~~l~~EL~~i~~~~~p~e~llV  217 (403)
T c2v3cC_         176 EKFKKADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILV  217 (403)
T ss_dssp             HTTSSCSEEEEECCCSCSSHHHHHHHHHHTTSSSCCSEEEEE
T ss_pred             HHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             986299899981888988877899999999831594319998