500 c2qthA_ Probab=94.73   E-value=0.3  Score=28.63  Aligned_columns=105  Identities=17%

Q ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCH-------------HHHHHHHHHHHHHHHC
Q ss_conf             899999997699975999879889989999999997299899996732568-------------9999999999851210
Q batch____        38 GKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGV-------------KEIREAIERARQNRNA  104 (447)
Q Consensus        38 ~~~L~~~i~~~~~~slLL~GPPGtGKTtlA~iIA~~l~~~~veinas~~~~-------------~dir~ii~~a~~~~~~  104 (447)
                      ...-+..-+....+.+.|.|+||+||||+.+.+.+........+.-.....             ......+.........
T Consensus       133 ~~l~~ele~~~~~~~ValvG~~NaGKSSLln~L~gT~d~~~~~~~~~~~~i~l~DT~G~~~~~~~~~~~~~~~t~~~~~~  212 (311)
T c2qthA_         133 NKLMKELESIKIIPSIGIVGYTNSGKTSLFNSLTGLMSPKRYAIPINNRKIMLVDTVGFIRGIPPQIVDAFFVTLSEAKY  212 (311)
T ss_dssp             HHHHHHHHHHHCCCEEEEEEBTTSSHHHHHHHHHTCCCSCEEEEEETTEEEEEEECCCBCSSCCGGGHHHHHHHHHGGGG
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCEEEECCCHHHHHHHHHHHHHHCC
T ss_conf             99999988521676599971887899899999839747568999738989999945406705863689999999996210


Q ss_pred             CCCCEEEEECHHHCCHHHHH-----HHHHHHHCCCCEEEEEEC
Q ss_conf             58848998574678999999-----999998649956999933
Q batch____       105 GRRTILFVDEVHRFNKSQQD-----AFLPHIEDGTITFIGATT  142 (447)
Q Consensus       105 ~~~~VLiIDEI~~l~k~~qd-----~LL~~lE~g~~~lI~aTT  142 (447)
                      ..-.++++|-.+........     ..+..+......+|.+.+
T Consensus       213 adiil~v~D~~~~~~~~~~~~~~~l~~l~~~~~~~~piIvV~N  255 (311)
T c2qthA_         213 SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTLN  255 (311)
T ss_dssp             SSEEEEEEETTSCHHHHHHHHHHHHHHHHHHTCCSCCEEEEEE
T ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             8879982357778733467668899999840103885899998


Done!