394 c2p6uA_ Probab=96.39   E-value=0.014  Score=38.42  Aligned_columns=109  Identities=21%

Q ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHH---------------
Q ss_conf             58999999976999759998798899899999999972---998999967325689999999999---------------
Q batch____        37 AGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA---NADVERISAVTSGVKEIREAIERA---------------   98 (447)
Q Consensus        37 ~~~~L~~~i~~~~~~slLL~GPPGtGKTtlA~iIA~~l---~~~~veinas~~~~~dir~ii~~a---------------   98 (447)
                      +..++..+..+   .|+++..|+|+|||+++.+.+-..   +...+.+..+..-..+..+.+...               
T Consensus        22 Q~~~i~~~~~~---~n~lv~aPTGsGKT~ia~l~~~~~l~~~~kvl~i~P~~aL~~q~~~~~~~~~~~~~~v~~~~g~~~   98 (671)
T c2p6uA_          22 QAEAVEKVFSG---KNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALAGEKYESFKKWEKIGLRIGISTGDYE   98 (671)
T ss_dssp             STHHHHHHTTC---SCEEEECSSHHHHHHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHGGGGTTTCCEEECCSCCS
T ss_pred             HHHHHHHHHCC---CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             99999999769---979998379976789999999999860983999807389889999999972158977999867978


Q ss_pred             ------------------------HHHHHCCCCCEEEEECHHHCCHHHHHHHHHHH------HCCCCEEEEEECCCCHHH
Q ss_conf             ------------------------85121058848998574678999999999998------649956999933872186
Q batch____        99 ------------------------RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHI------EDGTITFIGATTENPSFE  148 (447)
Q Consensus        99 ------------------------~~~~~~~~~~VLiIDEI~~l~k~~qd~LL~~l------E~g~~~lI~aTTenp~~~  148 (447)
                                              ........-.++++||+|++....-...+..+      -.....+|+.+..-+...
T Consensus        99 ~~~~~~~~~~Iiv~Tpe~~~~~l~~~~~~l~~i~liIiDE~H~~~~~~r~~~le~~l~~~~~~~~~~~ii~lSAt~~~~~  178 (671)
T c2p6uA_          99 SRDEHLGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKALRVIGLSATAPNVT  178 (671)
T ss_dssp             CCCTTGGGCSEEEEEHHHHHHHHHTTCSSGGGCCEEEETTGGGGGCTTTHHHHHHHHHHHHHHCTTCEEEEEECCCTTHH
T ss_pred             HHHHHHCCCCEEEECHHHHHHHHHCCCCCHHCCCEEEECCHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
T ss_conf             78885049989999868999998437210000753363006760657531589999999863389870998325652268