298 c2ocaA_ Probab=97.04   E-value=0.012  Score=38.90  Aligned_columns=103  Identities=16%

Q ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC----CCCEEEEECCCCCHHHHHHHHHHH--------------
Q ss_conf             58999999976999759998798899899999999972----998999967325689999999999--------------
Q batch____        37 AGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA----NADVERISAVTSGVKEIREAIERA--------------   98 (447)
Q Consensus        37 ~~~~L~~~i~~~~~~slLL~GPPGtGKTtlA~iIA~~l----~~~~veinas~~~~~dir~ii~~a--------------   98 (447)
                      +...+..++++   .+.|+.+|+|+|||.++..++...    +..++.+-.+..-..+..+.+...              
T Consensus       118 Q~~~i~~~l~~---~~~il~~pTGsGKT~~~~~~~~~~~~~~~~~vl~i~P~~~L~~Q~~~~~~~~~~~~~~~v~~~~~~  194 (494)
T c2ocaA_         118 QKDAVFEGLVN---RRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRLFSHAMIKKIGGG  194 (494)
T ss_dssp             HHHHHHHHHHH---SEEEEECCSTTTHHHHHHHHHHHHHHHCSSEEEEEESSHHHHHHHHHHHHHTTSSCGGGEEECGGG
T ss_pred             HHHHHHHHHHC---CCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             99999999727---985999489750048999999999621698199967938999999999998506578089970388


Q ss_pred             -----------------------HHHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             -----------------------85121058848998574678999999999998649956999933
Q batch____        99 -----------------------RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATT  142 (447)
Q Consensus        99 -----------------------~~~~~~~~~~VLiIDEI~~l~k~~qd~LL~~lE~g~~~lI~aTT  142 (447)
                                             ........-.++++||+|++.......++.........+.+..|
T Consensus       195 ~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~ii~DE~h~~~~~~~~~~~~~~~~~~~~l~lsaT  261 (494)
T c2ocaA_         195 ASKDDKYKNDAPVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGKSISSIISGLNNCMFKFGLSGS  261 (494)
T ss_dssp             CCTTGGGCTTCSEEEEEHHHHTTSCGGGGGGEEEEEEETGGGCCHHHHHHHGGGCTTCCEEEEEESC
T ss_pred             CCHHHHHHHHCCEEEECHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHEECCCC
T ss_conf             5567776421020220557876198988754456888788750402388898851010200210587