248 c1vmaA_ Probab=97.30   E-value=0.0043  Score=42.02  Aligned_columns=92  Identities=21%

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHH---HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCHHHH
Q ss_conf             6999759998798899899999999---9729989999673256899999999998512105884899857467899999
Q batch____        47 AGHLHSMILWGPPGTGKTTLAEVIA---RYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQ  123 (447)
Q Consensus        47 ~~~~~slLL~GPPGtGKTtlA~iIA---~~l~~~~veinas~~~~~dir~ii~~a~~~~~~~~~~VLiIDEI~~l~k~~q  123 (447)
                      .+++.-++|.||+|+||||++--+|   ...|..+.-+++-.....-+.++-.-+.....    .+........+.....
T Consensus        89 ~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v----~~~~~~~~~~~~~~~~  164 (294)
T c1vmaA_          89 PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGA----TVISHSEGADPAAVAF  164 (294)
T ss_dssp             SSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTC----EEECCSTTCCHHHHHH
T ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC----EEEECCCCCCHHHHHH
T ss_conf             789669999806887602489999999996799489997587686479999999976198----2897488369899999


Q ss_pred             HHHHHHHHCCCCEEEEEEC
Q ss_conf             9999998649956999933
Q batch____       124 DAFLPHIEDGTITFIGATT  142 (447)
Q Consensus       124 d~LL~~lE~g~~~lI~aTT  142 (447)
                      +.+.....++.-.++.=|.
T Consensus       165 ~~~~~~~~~~~d~IlIDTa  183 (294)
T c1vmaA_         165 DAVAHALARNKDVVIIDTA  183 (294)
T ss_dssp             HHHHHHHHTTCSEEEEEEC
T ss_pred             HHHHHHHHCCCCEEEECCC
T ss_conf             9999999779989998188