305 c1pjrA_ Probab=96.98   E-value=0.0027  Score=43.45  Aligned_columns=56  Identities=21%

Q ss_pred             HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC-------CCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf             999976999759998798899899999999972-------998999967325689999999999
Q batch____        42 PRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA-------NADVERISAVTSGVKEIREAIERA   98 (447)
Q Consensus        42 ~~~i~~~~~~slLL~GPPGtGKTtlA~iIA~~l-------~~~~veinas~~~~~dir~ii~~a   98 (447)
                      +++|... ..++++.||||||||+++-.....+       ..+++-++.+...+.++.+.+...
T Consensus        17 ~~ai~~~-~~~~lV~GppGTGKT~~l~~~i~~ll~~~~~~~~~ILv~s~tn~A~d~~~~ri~~~   79 (623)
T c1pjrA_          17 QEAVRTT-EGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSL   79 (623)
T ss_dssp             HHHHHCC-SSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred             HHHHHCC-CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHH
T ss_conf             9999588-99789994889867799999999999808999778789746989999999999996