74 c1ltxR_ Probab=99.50   E-value=1.3e-12  Score=106.51  Aligned_columns=158  Identities=20%

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC------------------------------------
Q ss_conf             87300899889489999999999889949999888766576522------------------------------------
Q batch____         4 PDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSC------------------------------------   47 (629)
Q Consensus         4 ~~~YDVIVIGgG~AGl~AAiaaAr~G~kVlLIE~~~~~~G~~~C------------------------------------   47 (629)
                      |.+|||||||||.|||.||..+++.|.+|+|+|++...+|..+.                                    
T Consensus         5 p~~~DVvVIGaG~aGL~aA~~La~~G~~V~vlEa~~~~GG~~~s~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~   84 (494)
T c1ltxR_           5 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENTENSMWQEQILENEEAIPLS   84 (494)
T ss_dssp             CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHTTTCCCCCCCGGGGSCTTEEEEEBC
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             74378899989888999999999879809999678899712799852770432146322565421222223442001133


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____        48 --------------------------------------------------------------------------------   47 (629)
Q Consensus        48 --------------------------------------------------------------------------------   47 (629)
                                                                                                      
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (494)
T c1ltxR_          85 SKDKTIQHVEVFCYASQDKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQ  164 (494)
T ss_dssp             SSCCCEEEEEEEECSTTCCCCCCHHHHHHTGGGCCEESSCCCEETTSHHHHHHHHHTGGGGCCEEEEEEEEEEETTEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             22333332331111465554312223211010023331213444014888976442856556556444210200140211


Q ss_pred             ----------CCCCCCCCHHHHHHHHHHHHH--------------HHHHHHHHHCC------------------------
Q ss_conf             ----------200043216789989874356--------------89998776178------------------------
Q batch____        48 ----------NPAIGGIGKGHLVKEVDALGG--------------LMAKAIDQAGI------------------------   79 (629)
Q Consensus        48 ----------N~sigg~~kg~L~~Eid~lgg--------------~~~~~~d~~~i------------------------   79 (629)
                                ++.+....+-.+.+....+..              .+..+.+..+.                        
T Consensus       165 ~p~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (494)
T c1ltxR_         165 VPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSTSCTVDGL  244 (494)
T ss_dssp             CCCSHHHHHHCSSSCHHHHHHHHHHHHHHTTGGGCGGGTGGGTTSBHHHHHHHSSCCHHHHHHHHTTTSCCCCCBHHHHH
T ss_pred             CCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf             45896787216564303444345677775235667588643215968899988389999999999999751478824799


Q ss_pred             -----CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEE--ECCEEEEEECCCCCEEEEEEEE
Q ss_conf             -----521002344533223556558899999999999957982999769999999--7998999881788489940689
Q batch____        80 -----QFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIV--ENDRVVGAVTQMGLKFRAKAVV  152 (629)
Q Consensus        80 -----~~~~ln~~~g~av~~~r~q~dr~~~~~~l~~~L~~~~~i~i~~~~V~~i~~--e~~~v~gV~t~~G~~i~AkaVI  152 (629)
                           ....+..........++.....  +.+.|.+.++..++.......|..|..  +++++.+|++.+|++++|+.||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~gG~~~--l~~~l~~~l~~~Gg~i~l~~~V~~I~~~~~~~~~~~v~~~~g~~~~a~~VI  322 (494)
T c1ltxR_         245 KATKKFLQCLGRYGNTPFLFPLYGQGE--LPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFI  322 (494)
T ss_dssp             HHHHHHHTTTTSSSSSSEEEETTCTTH--HHHHHHHHHHHTTCEEETTCCEEEEEEETTTCCEEEEEETTCCEEECSEEE
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCHHH--HHHHHHHHHHHCCCEEEEECCEEEEEECCCCCEEEEEEECCCCEEEECEEE
T ss_conf             999999999653066855886488789--999999997404870883042269998388976999993798399907899


Q ss_pred             ECCCCCCCCCC
Q ss_conf             82787546554
Q batch____       153 LTVGTFLDGKI  163 (629)
Q Consensus       153 IATGtf~~g~~  163 (629)
                      +|+..+.....
T Consensus       323 ~a~~~~~~~~~  333 (494)
T c1ltxR_         323 IEDSYLSENTC  333 (494)
T ss_dssp             EEGGGBCTTTT
T ss_pred             ECCCCCCHHHH
T ss_conf             86840363643