Phyre 2 alignment of P64496 with c3k1hA_

Return to main results | Retrieve Phyre Job Id

Job Description | P64496
Confidence | 1.93% | Date | Thu Jan 5 12:08:55 GMT 2012
Rank | 55 | Aligned Residues | 30
% Identity | 13% | Template | c3k1hA_
PDB info | PDB header:chaperone | Chain: A: PDB Molecule:putative uncharacterized protein; | PDBTitle: crystal structure of hp1076 from h.pylori
Resolution | 1.74 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | G | K | A | T | Y | T | V | T | V | T | N | N | S | N | G | V | S | V | D | Y | E | T | E | T | P | M | T | L | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | A | S | P | L | F | D | T | Q | L | N | I | A | I | N | D | E | I | F | S | M | I | V | V | N | P | L | D | L | L
Template Known Secondary structure |  | T | T |  |  |  | T | T |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | G | G | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions