25 d2nr4a1 Probab=98.56   E-value=1.8e-06  Score=53.67  Aligned_columns=129  Identities=16%

Q ss_pred             EEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCHHHCCCCC
Q ss_conf             99998449513015467433102799789997588205789998639289997899999999862657885022125742
Q batch____        21 NIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPAFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARW  100 (164)
Q Consensus        21 ~ivta~~~~~~~g~tvss~~~vS~~Pp~v~v~i~~~~~T~~~i~~s~~f~vn~l~~~~~~~~~~~~~~~~~~dkf~~~~~  100 (164)
                      +|+|| .++.+|...++-...=+    .+.+-+-+.|+|++||++++.|++|+...-..-.-..++.  ..++.|.... 
T Consensus        14 vIvtT-~~~~~N~APiGv~~~~~----~~~~rlf~gs~T~~Nl~~~~~~vvnit~Dp~lf~~aa~~~--l~~~~~~~~~-   85 (191)
T d2nr4a1          14 IIAST-GFEHPNAAPIGIVMKGE----RPFVRLFKGSHTWENVLKEKCLASNVVYDPILFVRSTFSD--LVPSEFEYVD-   85 (191)
T ss_dssp             EEEEE-CSSSCEEEEEEEEESSS----SCEEEEETTSHHHHHHHHHCEEEEECCCCHHHHHHHHHSC--CCGGGEEEEC-
T ss_pred             EEEEE-CCCCCCCCEEEEEEECC----EEEEEECCCCCHHHHHHHCCEEEEEECCCHHHHHHHHHCC--CCHHHCCCCC-
T ss_conf             99991-38877642068998689----3799982998517899755918999658689999987067--7700000014-


Q ss_pred             EECCCCCEEECCCEEEEEEEEEEEEECCCEEEEEEEEEEEE-ECCCCCCCEEECCEECCC
Q ss_conf             12689980765874999999999997598379999999999-778888869888801244
Q batch____       101 QTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIH-RHTTPYGLVWFDRSYHAL  159 (164)
Q Consensus       101 ~~~~~g~P~l~~a~~~leC~v~~~~~~Gdh~l~igeV~~~~-~~~~~~pL~y~~~~y~~l  159 (164)
                        ...+.|+|.+|.+|++|++.+..+......+..+..... .....+|+.-.+|.++++
T Consensus        86 --~~~~~p~L~~a~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~NRa~~av  143 (191)
T d2nr4a1          86 --GEFKFPVLKEAIAWVVFECINLRNTDQSLVADLVPLNAGFNERNIKELPVPNRGFNAV  143 (191)
T ss_dssp             --CCSCEEEETTCSEEEEEEEEEEEEETTEEEEEEEEEEEEECGGGCCSCCCCCHHHHHH
T ss_pred             --CCCCCEECCCCCEEEEEEEEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCHHHHHH
T ss_conf             --4457404136736999999996337874048899721112123024565311468999