BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (303 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77402 Uncharacterized HTH-type transcriptional regulat... 635 0.0 UniRef50_B4TGJ3 Transcriptional regulator, AraC family protein n... 495 e-139 UniRef50_Q32FK5 Putative ARAC-type regulatory protein n=5 Tax=En... 377 e-103 UniRef50_B5FJ85 Transcriptional regulator, AraC family protein n... 313 5e-84 UniRef50_B0MDV1 Putative uncharacterized protein n=1 Tax=Anaeros... 191 3e-47 UniRef50_B1QZ26 Putative transcription regulator, AraC family n=... 171 3e-41 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 123 8e-27 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 111 4e-23 UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing... 107 5e-22 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 104 4e-21 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 100 1e-19 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 97 5e-19 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 96 1e-18 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 96 1e-18 UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=P... 95 3e-18 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 95 4e-18 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 94 6e-18 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 94 9e-18 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 93 9e-18 UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=C... 93 1e-17 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 92 2e-17 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 92 2e-17 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 92 2e-17 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 92 2e-17 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 92 2e-17 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 91 6e-17 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 91 6e-17 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 89 1e-16 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 88 3e-16 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 87 5e-16 UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales ... 87 6e-16 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 87 8e-16 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 87 1e-15 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 86 2e-15 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 85 3e-15 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 85 3e-15 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 85 3e-15 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 84 4e-15 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 83 1e-14 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 82 2e-14 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 82 2e-14 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 82 3e-14 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 82 3e-14 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 81 4e-14 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 81 5e-14 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 80 6e-14 UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 T... 80 7e-14 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 80 8e-14 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 80 9e-14 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 79 2e-13 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 79 2e-13 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 79 2e-13 UniRef50_A3DHR0 Transcriptional regulator, AraC family n=3 Tax=C... 78 3e-13 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 78 4e-13 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 78 4e-13 UniRef50_C5RES4 Transcriptional regulator, AraC family n=1 Tax=C... 78 4e-13 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 78 4e-13 UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax... 78 4e-13 UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1... 77 7e-13 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 77 9e-13 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 77 9e-13 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 77 1e-12 UniRef50_C9KNA0 Putative uncharacterized protein n=1 Tax=Mitsuok... 76 1e-12 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 76 1e-12 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 76 1e-12 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 76 2e-12 UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides Re... 75 3e-12 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 75 3e-12 UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostri... 75 3e-12 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 75 3e-12 UniRef50_A6M1Y0 Helix-turn-helix-domain containing protein, AraC... 75 4e-12 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 74 5e-12 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 74 5e-12 UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=C... 74 6e-12 UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein ... 74 6e-12 UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L... 74 6e-12 UniRef50_A4J4N3 Transcriptional regulator, AraC family n=1 Tax=D... 74 7e-12 UniRef50_C6QRS7 Two component transcriptional regulator, AraC fa... 74 8e-12 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 74 9e-12 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 74 9e-12 UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=S... 74 9e-12 UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin... 74 9e-12 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 73 1e-11 UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonel... 73 1e-11 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 73 1e-11 UniRef50_C7GHF1 Putative two-component response regulator n=1 Ta... 73 1e-11 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 73 1e-11 UniRef50_A6GDR8 Putative transcriptional regulator n=1 Tax=Plesi... 73 1e-11 UniRef50_C0CZ81 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_C6D3P9 Two component transcriptional regulator, AraC fa... 73 2e-11 UniRef50_B8I8I4 Transcriptional regulator, AraC family n=2 Tax=C... 73 2e-11 UniRef50_C7GBP3 DNA-bindng response regulator, AraC family n=2 T... 72 2e-11 UniRef50_B7RYN5 DJ-1/PfpI family protein n=1 Tax=marine gamma pr... 72 2e-11 UniRef50_C2BII1 AraC family transcriptional regulator n=3 Tax=An... 72 2e-11 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 72 2e-11 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 72 2e-11 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 72 2e-11 UniRef50_C9A627 Transcriptional regulator n=3 Tax=Enterococcus c... 72 3e-11 UniRef50_C7PLK0 Transcriptional regulator, AraC family n=1 Tax=C... 72 3e-11 UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=B... 72 3e-11 UniRef50_C6CWE7 Two component transcriptional regulator, AraC fa... 72 4e-11 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 71 5e-11 UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=C... 71 5e-11 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 71 5e-11 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 71 5e-11 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 71 5e-11 UniRef50_A6LXV6 Xylan 1,4-beta-xylosidase n=2 Tax=Clostridium Re... 71 5e-11 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 70 6e-11 UniRef50_Q1N1F9 Transcriptional regulator containing an amidase ... 70 6e-11 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 70 7e-11 UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostri... 70 7e-11 UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostri... 70 8e-11 UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ... 70 9e-11 UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=... 70 9e-11 UniRef50_UPI0001788C4E two component transcriptional regulator, ... 70 9e-11 UniRef50_C9BRE3 AraC family DNA-binding response regulator n=5 T... 70 1e-10 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 70 1e-10 UniRef50_D1VU21 Transcriptional regulator, AraC family n=1 Tax=P... 70 1e-10 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 70 1e-10 UniRef50_C6LAG9 L-rhamnose operon transcriptional activator n=1 ... 70 1e-10 UniRef50_D0LKF1 Transcriptional regulator, AraC family n=1 Tax=H... 70 1e-10 UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-... 70 1e-10 UniRef50_B1MWN3 AraC-type DNA-binding domain-containing protein ... 69 1e-10 UniRef50_Q4LAE2 Lactose operon transcription activator n=1 Tax=S... 69 1e-10 UniRef50_C2HBK3 AraC family response regulator n=19 Tax=Enteroco... 69 1e-10 UniRef50_O33813 Lactose operon transcription activator n=4 Tax=S... 69 2e-10 UniRef50_C6JC58 Two component transcriptional regulator n=1 Tax=... 69 2e-10 UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bactero... 69 2e-10 UniRef50_A1HM14 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_C6VNM4 Transcription regulator n=3 Tax=Lactobacillus pl... 69 2e-10 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 69 2e-10 UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel... 69 2e-10 UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Ther... 69 2e-10 UniRef50_UPI00019047EB transcriptional regulator n=1 Tax=Rhizobi... 69 2e-10 UniRef50_C6D490 Two component transcriptional regulator, AraC fa... 69 2e-10 UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=C... 69 2e-10 UniRef50_A1SBN9 Transcriptional regulator, AraC family with amid... 69 2e-10 UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=G... 69 2e-10 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 69 2e-10 UniRef50_A5ZMK6 Putative uncharacterized protein n=1 Tax=Ruminoc... 69 2e-10 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 69 2e-10 UniRef50_B4WTL9 Transcriptional regulator, AraC family protein n... 69 3e-10 UniRef50_C6CUN1 Transcriptional regulator, AraC family n=1 Tax=P... 69 3e-10 UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri... 69 3e-10 UniRef50_B7CDP9 Putative uncharacterized protein n=1 Tax=Eubacte... 69 3e-10 UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostri... 69 3e-10 UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri... 69 3e-10 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 69 3e-10 UniRef50_A8MKK7 Transcriptional regulator, AraC family n=1 Tax=A... 69 3e-10 UniRef50_A1ZXA6 Probable transcriptional regulatory protein, put... 68 3e-10 UniRef50_A8SR16 Putative uncharacterized protein n=1 Tax=Coproco... 68 3e-10 UniRef50_C6CTP9 Two component transcriptional regulator, AraC fa... 68 3e-10 UniRef50_B8DGU9 Transcriptional regulator, AraC family n=2 Tax=F... 68 3e-10 UniRef50_C6CUJ6 Two component transcriptional regulator, AraC fa... 68 3e-10 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 68 3e-10 UniRef50_B0NF43 Putative uncharacterized protein n=1 Tax=Clostri... 68 3e-10 UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillu... 68 4e-10 UniRef50_UPI000178A190 two component transcriptional regulator, ... 68 4e-10 UniRef50_A6C6P4 Probable transcription regulator n=1 Tax=Plancto... 68 4e-10 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 68 4e-10 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 68 4e-10 UniRef50_C6JF00 Two component transcriptional regulator n=2 Tax=... 68 4e-10 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 68 4e-10 UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicu... 68 5e-10 UniRef50_UPI0001C35DF5 transcriptional regulator, AraC family pr... 68 5e-10 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 68 5e-10 UniRef50_C6CT34 Transcriptional regulator, AraC family n=1 Tax=P... 68 5e-10 UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=B... 67 6e-10 UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=C... 67 6e-10 UniRef50_C7RDA0 Transcriptional regulator, AraC family n=2 Tax=A... 67 7e-10 UniRef50_C7GA03 DNA-bindng response regulator, AraC family n=2 T... 67 7e-10 UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=L... 67 7e-10 UniRef50_C4FYZ2 Putative uncharacterized protein n=1 Tax=Abiotro... 67 7e-10 UniRef50_Q9F4J7 PblR n=2 Tax=Streptococcus RepID=Q9F4J7_STRMT 67 7e-10 UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=u... 67 7e-10 UniRef50_C6CVW8 Two component transcriptional regulator, AraC fa... 67 8e-10 UniRef50_C5RDR5 Transcriptional regulator, AraC family n=2 Tax=C... 67 8e-10 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 67 8e-10 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 67 8e-10 UniRef50_C6VUN3 Transcriptional regulator, AraC family n=1 Tax=D... 67 8e-10 UniRef50_C6CVX2 Two component transcriptional regulator, AraC fa... 67 8e-10 UniRef50_C6D1V9 Transcriptional regulator, AraC family n=1 Tax=P... 67 9e-10 UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri... 67 9e-10 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 67 9e-10 UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=C... 67 9e-10 UniRef50_C6CTG8 Two component transcriptional regulator, AraC fa... 67 1e-09 UniRef50_Q11HY1 Transcriptional regulator, AraC family with amid... 67 1e-09 UniRef50_C5FB19 Transcriptional regulator n=1 Tax=Lactobacillus ... 67 1e-09 UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. ora... 67 1e-09 UniRef50_UPI00017895AE two component transcriptional regulator, ... 67 1e-09 UniRef50_C9A6S2 Response regulator receiver n=5 Tax=Bacteria Rep... 67 1e-09 UniRef50_A9QDR4 Two component transcriptional regulator, AraC fa... 66 1e-09 UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1... 66 1e-09 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 66 1e-09 UniRef50_A8S1Z0 Putative uncharacterized protein n=1 Tax=Clostri... 66 1e-09 UniRef50_C6CT79 Transcriptional regulator, AraC family n=1 Tax=P... 66 1e-09 UniRef50_C3ANZ9 Methylphosphotriester-DNA alkyltransferase n=4 T... 66 1e-09 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 66 1e-09 UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero... 66 1e-09 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 66 1e-09 UniRef50_UPI000178960C transcriptional regulator, AraC family n=... 66 1e-09 UniRef50_C5RM76 Two component transcriptional regulator, AraC fa... 66 2e-09 UniRef50_UPI0001851370 two component AraC family transcriptional... 66 2e-09 UniRef50_C0ERT2 Putative uncharacterized protein n=1 Tax=Eubacte... 66 2e-09 UniRef50_A8U767 Transcriptional regulator, AraC family protein n... 66 2e-09 UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostri... 66 2e-09 UniRef50_Q187N6 AraC-family transcriptional regulator (Fragment)... 66 2e-09 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 66 2e-09 UniRef50_UPI00019065BD helix-turn-helix domain-containing protei... 66 2e-09 UniRef50_A0Y944 Transcriptional regulator, AraC family protein n... 66 2e-09 UniRef50_C4G4F0 Putative uncharacterized protein n=1 Tax=Abiotro... 66 2e-09 UniRef50_A8RW11 Putative uncharacterized protein n=1 Tax=Clostri... 66 2e-09 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 66 2e-09 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 66 2e-09 UniRef50_A4XQP9 Transcriptional regulator, AraC family with amid... 65 2e-09 UniRef50_C6CZ23 Two component transcriptional regulator, AraC fa... 65 2e-09 UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales... 65 2e-09 UniRef50_A9B1P7 Transcriptional regulator, AraC family n=1 Tax=H... 65 2e-09 UniRef50_C6IWH3 AraC/XylS family transcriptional regulator n=1 T... 65 2e-09 UniRef50_C6D1C4 Transcriptional regulator, AraC family n=1 Tax=P... 65 2e-09 UniRef50_Q9KBG9 BH1958 protein n=1 Tax=Bacillus halodurans RepID... 65 2e-09 UniRef50_UPI000178A86D transcriptional regulator, AraC family n=... 65 2e-09 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 65 2e-09 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 65 3e-09 UniRef50_C6LL33 Two-component response regulator n=1 Tax=Bryante... 65 3e-09 UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=C... 65 3e-09 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 65 3e-09 UniRef50_A6DMX5 Two-component response regulator n=1 Tax=Lentisp... 65 3e-09 UniRef50_A6TTZ3 Response regulator receiver protein n=1 Tax=Alka... 65 3e-09 UniRef50_A4XMH2 Two component transcriptional regulator, AraC fa... 65 3e-09 UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=P... 65 3e-09 UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=V... 65 3e-09 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 65 3e-09 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 65 3e-09 UniRef50_UPI0001C362BB response regulator receiver protein n=1 T... 65 3e-09 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 65 3e-09 UniRef50_C6CRE4 Transcriptional regulator, AraC family n=2 Tax=B... 65 3e-09 UniRef50_C6CT66 Two component transcriptional regulator, AraC fa... 65 3e-09 UniRef50_B9DSF4 AraC family regulatory protein n=1 Tax=Streptoco... 65 4e-09 UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=C... 65 4e-09 UniRef50_B9XJS0 Transcriptional regulator, AraC family n=1 Tax=b... 65 4e-09 UniRef50_C4ZGL1 Putative uncharacterized protein n=1 Tax=Eubacte... 65 4e-09 UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicu... 65 4e-09 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 65 4e-09 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 64 4e-09 UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=En... 64 5e-09 UniRef50_Q24RE3 Putative uncharacterized protein n=4 Tax=Bacteri... 64 5e-09 UniRef50_A3IBD0 Putative uncharacterized protein n=1 Tax=Bacillu... 64 5e-09 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 64 5e-09 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 64 5e-09 >UniRef50_P77402 Uncharacterized HTH-type transcriptional regulator ydiP n=52 Tax=Enterobacteriaceae RepID=YDIP_ECOLI Length = 303 Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS Sbjct: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA Sbjct: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV Sbjct: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS Sbjct: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS 300 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS Sbjct: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS 300 Query: 301 LVG 303 LVG Sbjct: 301 LVG 303 >UniRef50_B4TGJ3 Transcriptional regulator, AraC family protein n=28 Tax=Enterobacteriaceae RepID=B4TGJ3_SALHS Length = 296 Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust. Identities = 234/292 (80%), Positives = 254/292 (86%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFD+A+ET+F KTPR SRF SDDP WESGHH+HDNETELIYVKKG+AR IDS Sbjct: 1 MYQRCFDSAAETIFEQDKTPRFSRFVISDDPNWESGHHMHDNETELIYVKKGIARLIIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVV+ERGRLHAVASD N PATT TCALYGF F G EENQLLQ HSCPV++ Sbjct: 61 SLYVAHADDIVVVERGRLHAVASDSNSPATTYTCALYGFCFPGWEENQLLQSHSCPVVSV 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 QGKEVIK++FNELSV+LPQ KN SS++DAFAYTL LYYENFKNAYRSEQGYIKKDV Sbjct: 121 VQGKEVIKSIFNELSVLLPQGKNVLASSVYDAFAYTLTALYYENFKNAYRSEQGYIKKDV 180 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LIKD+L YLNNNYREKITL+QLSKKFRASVSYICHEF KEY I PINYVIQRRMTEAK++ Sbjct: 181 LIKDVLVYLNNNYREKITLDQLSKKFRASVSYICHEFAKEYHIFPINYVIQRRMTEAKFA 240 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEIL 292 LTNTE AEISWRVGYENVDHFAKLF+RHVGC P+DYR+QFKN Q L Sbjct: 241 LTNTESPLAEISWRVGYENVDHFAKLFMRHVGCYPNDYRKQFKNSLVAQAYL 292 >UniRef50_Q32FK5 Putative ARAC-type regulatory protein n=5 Tax=Enterobacteriaceae RepID=Q32FK5_SHIDS Length = 180 Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust. Identities = 179/180 (99%), Positives = 179/180 (99%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFDNASETLFVAGKTPRLSRFAFSD PKWESGHHVHDNETELIYVKKGVARFTIDS Sbjct: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDAPKWESGHHVHDNETELIYVKKGVARFTIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA Sbjct: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV Sbjct: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 >UniRef50_B5FJ85 Transcriptional regulator, AraC family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 RepID=B5FJ85_SALDC Length = 194 Score = 313 bits (802), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 147/180 (81%), Positives = 161/180 (89%) Query: 113 HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSE 172 HSCPV++ QGKEVIK++FNELSV+LPQ KN SS++DAFAYTL LYYENFKNAYRSE Sbjct: 11 HSCPVVSVVQGKEVIKSIFNELSVLLPQGKNVLASSVYDAFAYTLTALYYENFKNAYRSE 70 Query: 173 QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR 232 QGYIKKDVLIKD+L YLNNNYREKITL+QLSKKFRASVSYICHEF KEY ISPINYVIQR Sbjct: 71 QGYIKKDVLIKDVLVYLNNNYREKITLDQLSKKFRASVSYICHEFAKEYHISPINYVIQR 130 Query: 233 RMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEIL 292 RMTEAK++LTNTE AEISWRVGYENVDHFAKLF+RHVGCSP+DYR+QFKN EQ L Sbjct: 131 RMTEAKFALTNTESPLAEISWRVGYENVDHFAKLFMRHVGCSPNDYRKQFKNSLVEQAYL 190 >UniRef50_B0MDV1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDV1_9FIRM Length = 290 Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 165/274 (60%), Gaps = 5/274 (1%) Query: 13 LFVAGKTPRLSRFAFS-DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 +F +P++ R + S ++P W +H+H NETEL+Y+ KG + I+++ Y I+ Sbjct: 14 IFEPDHSPKICRLSHSYNNPTWNYQYHLHKNETELVYISKGSGTYVINTNSYQLKKGMIL 73 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQP-HSCPVIAAGQGKEVIKTL 130 ++E+G +H++ SD +DP TCA+ ++ ++ + P + CP + +G + I L Sbjct: 74 IVEQGAIHSLFSDEHDPLNCWTCAISDYKLCCRSDHGFMLPANVCPAMDSGIHENYIHRL 133 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 F EL ++ S ++ ++ DA A +LA +Y+E F ++E+ K +DIL Y+N Sbjct: 134 FEELDLLRKFSSDTHMAAC-DALAVSLASIYFELFLADPKTERH--KDSSFARDILIYIN 190 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 NY +ITL++L+++F S +I HEF+K Y ISPINYVI RR+ EAKW L NT S Sbjct: 191 ENYASQITLKKLAEQFHISTDHISHEFSKVYGISPINYVIDRRLNEAKWMLINTSDSLVS 250 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 I+ ++GYEN +HF+KLF + + P +R +++ Sbjct: 251 IAKKIGYENTNHFSKLFQKRMQYPPLKFRELYQH 284 >UniRef50_B1QZ26 Putative transcription regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1QZ26_CLOBU Length = 344 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 96/283 (33%), Positives = 154/283 (54%), Gaps = 7/283 (2%) Query: 1 MYQRCFDNASETLFVAGKTPRLSR-FAFSDDPKWESGHHVHDNETELIYVKKGVARFTID 59 M+ F+ S+ +F P+L R F + P W +H+H N TE++Y+ G A +TID Sbjct: 1 MFSFSFNKKSQDIFKDKHYPKLRRIFHNYNTPDWTYNYHLHKNSTEIVYIANGKATYTID 60 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG-AEENQLLQPHSCPVI 118 ++ ++++E+G LH+++SD P T + + G +E N+LL + +I Sbjct: 61 METFILEKGHLLIMEKGVLHSISSDTEKPVDAWTIIIDDYTINGFSESNRLLNSSTYAII 120 Query: 119 AAGQGKEVIKTLFNEL-SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 G +IK++ E+ ++ + ++ SQ + + A +L L Y S + K Sbjct: 121 KTGIHDLLIKSIMEEIRTLCIDETLISQFTC--NMLATSLVSLIYGLLPEENLSIEK--K 176 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 K ++DIL Y++ +Y E ITL++LS F S +I H FTKEY +SPINY I R+ EA Sbjct: 177 KSSFVRDILVYISEHYNEPITLKKLSDVFHVSAGHISHAFTKEYTVSPINYAIDLRICEA 236 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 K L NT+ S IS +VGY N+ HF+ +F V CSP ++R Sbjct: 237 KLLLLNTDESLTSISNKVGYTNISHFSNIFTSRVNCSPLEFRE 279 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 87/272 (31%), Positives = 136/272 (50%), Gaps = 22/272 (8%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 L AGK SD P W H HD+ E+I V G FTI Y A DI+V Sbjct: 14 LLYAGKV--------SDTPNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILV 65 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAE--ENQLLQPHSCPVIAAGQGKEVIKTL 130 +G LH S +++P T C GF A E+ ++ P PVI + + I+ L Sbjct: 66 YNKGVLHEEQSSIDNPLITYYC---GFSLPKASPSEDWVIPPDVEPVIRSSRVFPEIEAL 122 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV---LIKDILF 187 + +I+ +S + ++ + L + A R++Q +IK++ L + I Sbjct: 123 ---MKMIVDESSIKEDG--YEGISRYLINSVILLLRRAVRNQQ-HIKQESNTGLAEQIKD 176 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++ N+ + I+L+ L ++F + YI H F YRISPINY I RR+ EA L TE+ Sbjct: 177 YIDRNFTQNISLKDLGRQFHVNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMK 236 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 E++ +GY+N ++F+ +F R G SP+ +R Sbjct: 237 VWEVAKLLGYDNPNYFSIIFRRVTGLSPNRFR 268 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/243 (29%), Positives = 125/243 (51%), Gaps = 6/243 (2%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H++ E+I V G F ID+ Y+A D++ + G LH + D AT+C + Sbjct: 2 HQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSC-LGVS 60 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTL 157 FQ G N+++ P ++ + ++TLF+ +V L + ++ + D T Sbjct: 61 DFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHT-AVQLALAGDA--PCVLDQL--TC 115 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 AIL + + A + +++ L + Y++ +YRE ITL+ ++ + + Y+ H F Sbjct: 116 AILCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHAF 175 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 + SP+ Y+I+RR+ EA+ L T+ S EI++ GY N ++F +F R VG +P Sbjct: 176 REHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPGQ 235 Query: 278 YRR 280 YRR Sbjct: 236 YRR 238 >UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing protein n=12 Tax=Enterobacteriaceae RepID=B7MQA3_ECO81 Length = 289 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 7/250 (2%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H+H ELI + +G + I +Y D+V+ +H + P T C + Sbjct: 34 HMHPQTVELILITEGDGEYFIGDRIYPVRKGDLVIYNSQVVHDEYLESGRPIGTICCGIN 93 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTL 157 G EN L+ PVI ++ L + + ++ Q + A T Sbjct: 94 NISCPGLRENALIPDDIVPVIPLYHHYATVEKLMSSVFTVINQHAVEGPAM---AQLLTQ 150 Query: 158 AILYYENFKNAYRSEQGYIKK-DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 +L Y R+ I++ + L+ I Y++ N+ E I L+ L+ KF S Y+ HE Sbjct: 151 VVLKYIEGNVLLRTGNDAIQRHENLLDSIKSYIDRNFYEPIRLDTLATKFNVSPYYVSHE 210 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS---WRVGYENVDHFAKLFLRHVGC 273 F + Y SP++Y+I+RR+ EA+ LT + + +I+ +RVG+ N+ HF F VG Sbjct: 211 FKRRYGYSPMDYLIKRRLGEAQSLLTTDKGGREKITSIAYRVGFSNLSHFQNYFKNKVGK 270 Query: 274 SPSDYRRQFK 283 +P YR+ ++ Sbjct: 271 TPGQYRKDYR 280 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/250 (30%), Positives = 128/250 (51%), Gaps = 11/250 (4%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W S H H + TEL YV KG F I + + +D V+I +H S +P Sbjct: 33 WHSQLHSH-HFTELFYVTKGCGGFKIGADEFNVQENDFVIINPNTMHTEVSRDRNPLEYI 91 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 A+ G F+ E+ L SC A E++ + L V Q+KN + Sbjct: 92 VIAIDGISFE-IPEDSLKDYISCNY--ANYKNEIL--FYLNLMVKESQAKNELYDDMCQQ 146 Query: 153 FAYTLAI-LYYENFKNAYRSEQGYIKKDV-LIKDILFYLNNNYREKITLEQLSKKFRASV 210 L I + N N ++ I+K++ +IK+ Y++ NY ++ITL+ L++K + Sbjct: 147 LMQVLLINILRLNRINVSLTQGKTIRKEIFMIKN---YIDRNYHKEITLDTLAEKTHMNK 203 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 Y+ HEF + +SPI+Y++QRR+ E+K+ L +T+LS ++IS +G+ ++ +FA+ F + Sbjct: 204 FYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSISQISTILGFSSLSYFAQAFKKS 263 Query: 271 VGCSPSDYRR 280 SP YR+ Sbjct: 264 TNFSPLQYRK 273 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 81/290 (27%), Positives = 133/290 (45%), Gaps = 25/290 (8%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSS 61 Y + + + T+F A K R A+ H H + TEL Y+ G +++ ID Sbjct: 6 YDLTYSDFNPTVFFASKMRVTKRTAY----------HAHQDFTELTYILSGTSKYRIDDI 55 Query: 62 LYVAHADDIVVIERGRLHA-VASDVNDPATTCTCALYGFQFQGAEEN--QLLQPHSCPVI 118 Y A D++V G H + D +P FQF+ EN QL + Sbjct: 56 YYDVKAGDMIVCNPGVFHQNMLLDGEEPLVEFCTGFTDFQFKNMPENTIQLSNQGHIVHL 115 Query: 119 AAGQGKEVIKTLFNELSVILPQSKNSQTSS---LWDAFAYTLAILYYENFKNAYRSEQG- 174 ++ +E + ++ +L +++ Q L L +L E + +++G Sbjct: 116 SSEAKRETSRLCYD----MLAENEAGQVGKYFMLKAQLIQMLMLLMREVIEAPKVTQKGC 171 Query: 175 ---YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 K +K I+ YL NY KI+L+Q++ S YI F +E SPINY+I+ Sbjct: 172 NFETYSKSYAVKRIINYLMENYEHKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIK 231 Query: 232 RRMTEAKWSLTNTE-LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 R+ +AK L+ E S I+ +GY++V HF+KLF ++ G SP +YR+ Sbjct: 232 IRLEKAKEILSEREGGSIKNIANEIGYDDVYHFSKLFKKYFGISPQNYRK 281 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 128/253 (50%), Gaps = 5/253 (1%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+N EL ++ G + + + DI++ + +H + ++ C A+ Sbjct: 35 HQHENCIELNFMISGNGTHIVGNEICHTQPGDIIIYDSKVMHDESLMLDSLTDACCIAVT 94 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTL 157 G + GA N LL P P I + + TL++ + L + + +A A T+ Sbjct: 95 GLKRPGARPNALLPPGLHPCIPCQSIAQELCTLYHIIERSLAKPHGYPAA---NAAAQTI 151 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 L ++ R+ + ++++L++ + Y+ +Y E +++ ++++F AS YI H F Sbjct: 152 VHLVWQQISE--RAVRAAGQENMLMERVRSYIEQHYAEALSIRDIAQEFHASRDYIAHAF 209 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 +P+ Y+ + R+ +A+ L +T+LS E++ RVG+++ ++F+++F + +G P Sbjct: 210 KHTTNYAPLQYLRRWRIGKAQTLLIDTDLSLTEVASRVGFDDPNYFSRVFRQVIGMPPGT 269 Query: 278 YRRQFKNCFAEQE 290 +RR ++ +Q+ Sbjct: 270 FRRTWRAAQRKQQ 282 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 12/256 (4%) Query: 27 FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVN 86 D P W + H HD E++YV G ++ + D+VV+ G LH SD Sbjct: 27 LEDAPNWFNIQHSHDF-CEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAK 85 Query: 87 DPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 P A+ F G L Q V++ G+ + + EL Q +SQ Sbjct: 86 APLRLIFLAIRDFAVPGLPAGCLSQ-EKYRVLSCGEYRYKMDIYLRELL----QETSSQI 140 Query: 147 S---SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + L +L + E ++ IK+ YL+ N+ ITL+ LS Sbjct: 141 EFYQEISQGLVSALLVLVMRLIRINPEDEAALSQECQKIKE---YLDQNFTSPITLDSLS 197 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + S Y+ H F ++ +SPI Y+ +RM +A L+ TEL +E+S VGYEN +F Sbjct: 198 ETVYISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYF 257 Query: 264 AKLFLRHVGCSPSDYR 279 +++F R G SP YR Sbjct: 258 SQVFKRIYGISPVKYR 273 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 9/262 (3%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +S+ F D W S H H TEL Y G +F + L+ DD+V++ H Sbjct: 54 ISKSRFGGD--WNSTVHTHSC-TELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTE 110 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 S P + G + + + +C + +E + TL + L +S Sbjct: 111 LSLNASPLEYIVLGVSGIEILFGKADSTYAIFNC-----RENRERMVTLLHMLLAEADRS 165 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + D L I + + E+ + +I YL+NNYRE+I+L+ Sbjct: 166 LDGCETVCQDLLE-VLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDT 224 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L++ + Y+ H F K Y ISPI Y+ +RR+ E+K+ L NT S A+IS +G+ + Sbjct: 225 LAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPS 284 Query: 262 HFAKLFLRHVGCSPSDYRRQFK 283 +F++ F + G +P++YRRQ + Sbjct: 285 YFSQCFRKAEGLTPNEYRRQVR 306 >UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEI2_9ENTR Length = 289 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/243 (25%), Positives = 119/243 (48%), Gaps = 3/243 (1%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD+ EL++++ G + ID Y D+++ LH +D +C + Sbjct: 41 HKHDDRFELMFIRAGSGIYNIDGRGYQVQRGDLLLFNANVLHDENPAPSDDLLIFSCGVE 100 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTL 157 + +G +N L H V+ +G+ + I LF+++ + SK +S + D L Sbjct: 101 QLKVEGLPQNVLTTRHQVAVMPSGEFYDEICQLFDQMWSHV-SSKRLFSSEVGDNLISIL 159 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 +L + + +Q +L + I Y++++Y+++I L+ ++ + Y+ H F Sbjct: 160 LLLCRNIWIENKQDQQN--NHTLLGQRIKDYIDDHYKDEIALKSITAALNMNQFYLAHVF 217 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 SP Y +RR+ EA+ L +T L E++ VGY+NV++F ++FL +G P+ Sbjct: 218 KAYSGYSPKQYQTRRRIGEAQSLLLSTNLGVTEVANAVGYDNVNNFHRIFLNLIGIPPAR 277 Query: 278 YRR 280 Y++ Sbjct: 278 YKK 280 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 7/245 (2%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD+ EL+ V +G + ID Y A ++++ +H T A+ Sbjct: 2 HEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAIG 61 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTL 157 G + G + LL CPV Q +++LF+ + +S + L A L Sbjct: 62 GLRIDGLPADHLLPDGYCPVQPLRQHFAEVQSLFDAIEK-EAKSHAEIANYLTMALITKL 120 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 A E + EQ + L +++ NY+E I L ++ + Y+ H F Sbjct: 121 AAFLREE---GLQEEQ---QTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHLF 174 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 E +SP+ YVI RR+ EA+ L NT+++ +I+ +VGY N ++F +F + +P + Sbjct: 175 KAEIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPGE 234 Query: 278 YRRQF 282 YRR++ Sbjct: 235 YRRKW 239 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 9/249 (3%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVN--DPATTCTCA 95 H HD E E+IYVK G+ +I Y+ A D V+ G LH + S D T Sbjct: 48 HWHD-EFEIIYVKSGLLTVSISGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYFTFLFPL 106 Query: 96 LY-GFQFQGAEENQLLQP-HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAF 153 Y F+ +++LL+P +S ++ + K+ K L +L + + ++N +T S A Sbjct: 107 KYISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKELCEQL-IDIYMAENDETESKITAQ 165 Query: 154 AYTLAILY---YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 T IL E +K + E ++++ K+++ Y+ N+ KI+L++ ++F S Sbjct: 166 IKTKIILLQFILEMWKKGFVIENDTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQFHLSE 225 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 YI F + + I+ Y+ R+ AK L +T+LS E + + GY+NV +F + F + Sbjct: 226 KYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIRSFKKA 285 Query: 271 VGCSPSDYR 279 G SP YR Sbjct: 286 YGISPLKYR 294 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 123/254 (48%), Gaps = 16/254 (6%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W+S H H N E Y+ G +F+++ + A+D++++ +H S+ + P Sbjct: 56 WKSLPHSH-NFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSKPMEYI 114 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS---KNSQTSSL 149 + G +FQ ++ +L + + K + FN L+ + +N +L Sbjct: 115 VLGIEGIKFQAEDQGYIL-------LNSSAHKSDLHLYFNSLAHEMKSEQPYRNFVCQNL 167 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 + +T+ IL + FK + S ++ + K Y+ NY+E IT+E LS + Sbjct: 168 LNII-FTM-ILRNDAFKISIVSGPKLTRECNIAKK---YIEENYQENITIETLSSLVHLN 222 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 Y H F K++ SPINY+I+RR+ E+ L +T S + IS VG+ + +F++ F R Sbjct: 223 KYYFVHNFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKR 282 Query: 270 HVGCSPSDYRRQFK 283 +P +Y++ +K Sbjct: 283 MTNITPQEYKKMYK 296 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 19/260 (7%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E E+IYVK G I Y+ D V+ G LH + S T T + Sbjct: 35 HWHD-EFEIIYVKSGFLTVNISGENYIGKPGDAFVVSPGNLHFMGSK------TGTVDYF 87 Query: 98 GFQF---------QGAEENQLLQP-HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 F F +++LL+P S ++ + K+ IK L +L I K+ + Sbjct: 88 TFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCEQLIEIYEAKKSEREL 147 Query: 148 SLWDAFAYTLAILYY--ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 ++ + +L + E ++ + E ++++ K+++ Y+ N+ KI+L++ ++ Sbjct: 148 NITTQIKTKIILLQFILEMWEKGFIVENNTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQ 207 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 F S YI F + + I+ YV R+ AK L +T++S E + R GY+N+ +F + Sbjct: 208 FHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTEAAMRSGYQNISYFIR 267 Query: 266 LFLRHVGCSPSDYRRQFKNC 285 F + G SP YR++ +C Sbjct: 268 SFKKTYGVSPLKYRKKQVDC 287 >UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1I4_CLOCE Length = 285 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 10/250 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD TE+ V G ++ ID LY +I++I G H L Sbjct: 32 HTHD-YTEVKIVLSGYFKYIIDDKLYEVAKGNIIIINPGVQHEKIIPSGVKVEEFNYGLT 90 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW--DAFAY 155 F+ EN L++P S PV + I NE I Q KN L+ + Sbjct: 91 NIHFKELPENFLIEPSSLPVFTLPLYQPEIIKCINE--TINEQEKNEPYCDLFIKSSIMK 148 Query: 156 TLAILYYENFKNAYRSEQGYI-----KKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 A+L+ N R+E+ + +K ++ DIL YL+ NY E+I+L +++ S Sbjct: 149 LTALLHRGMTANKERTEKTRLDIQTSEKTNIVNDILEYLSTNYMEQISLYRIAHNMYLSP 208 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 YI F +E SPIN++I+ R+T+A+ L + + ++ VGYE+ +F+KL+ ++ Sbjct: 209 VYISKIFKEETGESPINHLIRIRLTKARELLMSGNMPIKTVARSVGYEDAFYFSKLYKKY 268 Query: 271 VGCSPSDYRR 280 G PS +R Sbjct: 269 YGIPPSMEKR 278 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 18/258 (6%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H +E E +Y+ G ++I+ Y A + + I +LHA S P C + Sbjct: 38 HWH-SEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSFNGMPCEACVVLFH 96 Query: 98 GFQFQGAEENQLLQPHSCPVIAAG-----------QGKEVIKTLFNELSVILPQSKNSQT 146 F +++ P++ + + ++ L +EL L S+ Sbjct: 97 PNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEEEWQRLVMKLLSELDD-LKYENVSEN 155 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI---KDILFYLNNNYREKITLEQLS 203 L + + + L Y+N + + QG ++ + + +L Y++ NY+E+ITL L+ Sbjct: 156 ELLLKSKIFEIWHLCYKN--SVALAPQGRKNRNYKLERMQPVLNYIHENYKEEITLMALA 213 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 K S CH F + ISPI YVI+ R+ ++ LT T+ A+I+ VG+ N+ +F Sbjct: 214 KILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIARNVGFNNISYF 273 Query: 264 AKLFLRHVGCSPSDYRRQ 281 + F++ +GCSPS YR + Sbjct: 274 NREFIKAIGCSPSKYRLE 291 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/290 (28%), Positives = 124/290 (42%), Gaps = 46/290 (15%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD--V 85 SD HH HD + ELI++KKG + ID +V H + I I LH + S+ Sbjct: 26 SDSENLIVKHHWHD-QLELIHMKKGEFQVEIDMDKHVVHEETICFINSEELHFIKSNHPC 84 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA--------GQGKEVIKTLFNELSVI 137 + A + F + + L+QP + G+E++K E S I Sbjct: 85 KESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFIFKKDKHGEEILK----EYSEI 140 Query: 138 L------------PQS----KNSQTSSLWDAFAYTLAILY------YENFKNA-YRSEQG 174 L P+ K S + + LAILY EN KN YR E Sbjct: 141 LEAYKISGQISQNPEGNITEKLSSQIKIKASLLKILAILYENNLLIKENNKNKDYRVE-- 198 Query: 175 YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 IK + Y+ NNY EKI ++ LSK+ + Y C F + +P+ YV + R+ Sbjct: 199 ------YIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKTPMEYVNEYRI 252 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 +AK L T +I G+ N+ +F K+F +H G +P YR+ F N Sbjct: 253 KKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKNFIN 302 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 6/275 (2%) Query: 13 LFVAGKTPRLSRFAFSDDP--KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 +F + PRL ++ P H H + E I + +G ID Y D+ Sbjct: 11 VFTSEAMPRLVTLYRAETPYTSMPRTMHRHGDVAEFILITEGSGIHIIDGQRYYTQKGDL 70 Query: 71 VVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL 130 ++I + +H +S N + + A+ G Q + L P PV+ E + Sbjct: 71 LLIGQDVVHDESSPANRNLSIYSGAIRGLQLPNLPAGKFLPPDVLPVLKT----EGLFPD 126 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 F L + + + ++ + L L + RS ++ L+ + L+ Sbjct: 127 FCHLLEFMYRGAQGKGCHPEESINHLLCALLLLVMEVTSRSVVLPPEEHHLLAGVRSRLD 186 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 Y E ITL L+++F S ++ H F Y +P+ Y+ +RR+ EA+ L +T L E Sbjct: 187 AAYDETITLAGLAQEFHVSTFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDTALPITE 246 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 I+ R GY + +F K F + G SP DYR+ ++ Sbjct: 247 IAIRTGYNSSSYFNKAFHKITGMSPRDYRKTYRKI 281 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 13/264 (4%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +S+ F D W S H H TEL Y G +F + L+ DD+V++ H Sbjct: 23 ISKSRFGGD--WNSTTHTHSC-TELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTE 79 Query: 82 ASDVNDPA--TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 S P A F F A+ N + + +E + TL + L Sbjct: 80 LSLNASPLEYIVLGVASMEFLFSKADTNY-------AIFNCRENRERMVTLLHMLLAEAD 132 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 +S + + D L I + + E+ ++ +I YL+ NYRE I+L Sbjct: 133 RSLDGCETVCQDLLE-VLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISL 191 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 + L++ + Y+ H F +EY ISPI Y+ +RR+ E+K L NT S A+IS +G+ + Sbjct: 192 DLLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSS 251 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFK 283 +F++ F + G +P++YRRQ + Sbjct: 252 PSYFSQCFRKAEGMTPNEYRRQTR 275 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 12/259 (4%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 + D W S H H +EL +V KG F I+ +D+++I H + Sbjct: 27 TSDKDWHSMEHSHYF-SELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQ 85 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIA-AGQGKEVIKTLFNELSVILPQSKNSQT 146 P + G QFQ +E+ P+S V + + + +E+ L + I Q + QT Sbjct: 86 PWEYIALGIEGVQFQYSEKEA---PYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQT 142 Query: 147 --SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 +L + ++A + F +A R Q ++ L++ Y+N +Y E ITL+ LS Sbjct: 143 ICQNLLELILLSVARSTRQEFLSAPR--QKTTRECRLVEQ---YINEHYHEDITLDTLSA 197 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + Y+ H F +SPINY+IQRR+ EA++ L +T S +I G+ + +F+ Sbjct: 198 LVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFS 257 Query: 265 KLFLRHVGCSPSDYRRQFK 283 + F R G +P+ YR++ K Sbjct: 258 QTFRRLTGTTPNAYRKKKK 276 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 14/253 (5%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W S H H TEL +V G F ++ + D++VI H S + DP Sbjct: 32 WSSYPHTH-YFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTEKSSLEDPLEYI 90 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 + G F + N+ L HS + K+ + F IL +++NSQ Sbjct: 91 VLGVDGLNFVIDDANEYLLFHS------DEMKDRLDFYFR---TILEETENSQ-KDYEKV 140 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI---LFYLNNNYREKITLEQLSKKFRAS 209 L IL + A S + + + ++ Y+++++RE ITL++L++ + + Sbjct: 141 CQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDKLAEIAQIN 200 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 Y H FT+ Y ISP+NY+ Q+R+ ++ LT+T++S A+I+ + G+ + +F + F + Sbjct: 201 KYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSSYFTQCFRK 260 Query: 270 HVGCSPSDYRRQF 282 G +P+ YR+QF Sbjct: 261 SCGMTPTAYRKQF 273 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 38/289 (13%) Query: 15 VAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 V+ TP F D + +G H H NE E++Y+++G+ +F +D Y + + + Sbjct: 13 VSHGTPDFPLFVHEDIFVYRNGVVNPHWH-NEFEILYMERGIGKFYVDGYEYKLNEGEYL 71 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSC------PVI------A 119 + G +H+ + + ++ + +EE P C P+I Sbjct: 72 FVNSGSIHSGLEMIK--RSIGYAIVFDLRLLYSEE-----PDYCKHEYFLPLINKRYHIP 124 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQ-------TSSLWDAFAYTLAILYYENFKNAYRSE 172 + E I+ N++ I+ K S L+D F YY +N Sbjct: 125 SNLNDEHIR---NDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFK--YYAERRNQ-DGR 178 Query: 173 QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR 232 GY K IKD+L Y+N NY + ++L++LS++ S Y+C F + R+SP+ Y+ + Sbjct: 179 LGY--KIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKV 236 Query: 233 RMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 R+ +A L NT++S +EI++ G++N+ +F K+F +++ +P +R+Q Sbjct: 237 RVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 129/266 (48%), Gaps = 9/266 (3%) Query: 27 FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD-- 84 F +D + HH H+ + E+IY+ +G + I+ Y DI++I G +H + Sbjct: 19 FFNDGYSNTPHHWHE-DIEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFKEKK 77 Query: 85 -VNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 N ++Y G ++ ++++P I G E+ + ++ I+ + Sbjct: 78 FSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEIINEYSK 137 Query: 144 SQTSS--LWDAFAYTLA-ILYYENFKNAYRSEQGYIKKDVLIK-DILF-YLNNNYREKIT 198 ++ + A Y LA IL K +Y SE +K+ L K D +F Y++ NY+E+I Sbjct: 138 AEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNYQERID 197 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L+ +SK S Y F + ++ ++Y+ R+ +A+W + + + AEI++ G+ Sbjct: 198 LDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNCGFN 257 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQFKN 284 ++ F +LF VGC+P YRR KN Sbjct: 258 SIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 24/263 (9%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH-AVASDVNDPATTC 92 E +H HD E + G +F ID Y D +++ G H + A + C Sbjct: 29 EQNYHAHDF-IEFAVIMGGKGKFYIDGKDYEVEEGDFILLNPGTYHRSKAGYSKEGLKEC 87 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGK------EVIKTLFNELSVILPQSKNSQT 146 A G F+G + P G GK + K +F +V+ +++ Sbjct: 88 YIAFSGVSFKGCKSGYF------PSFK-GNGKIIKMADRMKKNIFQICTVMNKEARECSA 140 Query: 147 SSLWDAFAYTLAIL----YYENFKNAYRSEQGYI----KKDVLIKDILFYLNNNYREKIT 198 + AY + IL + + +GYI K +++ I+ Y+ NYREKI+ Sbjct: 141 GRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYIFQSTGKKYVVQQIMKYMEENYREKIS 200 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL-TNTELSQAEISWRVGY 257 LEQ++ S YI F E +PINY+I+ RM +AK L + E E++ VGY Sbjct: 201 LEQIAANMYLSSFYIAKIFKSETGDTPINYLIRLRMEKAKEILEISPEEPIKEVAAAVGY 260 Query: 258 ENVDHFAKLFLRHVGCSPSDYRR 280 + HF+KLF +H G SP Y++ Sbjct: 261 SDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 28/258 (10%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTCAL 96 H HD E E+IY++ G TID+ L+ ++ G LH + S D+N T L Sbjct: 35 HWHD-ELEIIYIRNGSINITIDNELFTGTGGSFFIVNPGELHYMGSNDLNADYYTILFPL 93 Query: 97 YGFQFQGAE--ENQLLQP---------HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 FQ + EN L +P HS P E+ + + L ++ +K + Sbjct: 94 EFISFQSNDYVENMLFKPMRSSHVILTHSLPY------SEIYAEIISLLEKLIYINKYEK 147 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV----LIKDILFYLNNNYREKITLEQ 201 D IL E N +KK + ++I+ Y+N+NY EKITL Sbjct: 148 GFYQLDC-----KILLLEILSNILSIPDILVKKTSNASDMRREIITYVNDNYLEKITLSD 202 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L+ +F S YI F K + I+ YV R+ AK L T +S +++ G+ NV Sbjct: 203 LADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVALSSGFPNVS 262 Query: 262 HFAKLFLRHVGCSPSDYR 279 +F + F G +P YR Sbjct: 263 YFIRSFKESYGKTPFSYR 280 >UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales RepID=C7X929_9PORP Length = 296 Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 13/241 (5%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G + I Y ++I G ++ +D DP T +Y FQG Sbjct: 60 LIYCTEGKGWYRILGKQYTVEKYQYIIIPPGIPYSFGADEGDPWT-----IYWLHFQGKL 114 Query: 106 ENQLLQPHSCPVIAAGQGKEVIK---TLFNEL--SVILPQSKNSQTSSLWDAFAYTLAIL 160 +Q L H PV + ++ LF E+ S + K S + + + + Sbjct: 115 CDQFLPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFI 174 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 Y E F++ Q K+ ++ Y+ N ++ +TL++L+ F+ S S+ F E Sbjct: 175 YLEQFRHIMIPSQ---KEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGE 231 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +SP+NY I+ ++ +A + T + EI+ +G+E+ +F++ F + +GCSPS YR+ Sbjct: 232 TGVSPMNYFIRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRK 291 Query: 281 Q 281 + Sbjct: 292 K 292 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 78/276 (28%), Positives = 123/276 (44%), Gaps = 39/276 (14%) Query: 23 SRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA-HADDIVVIERGRLHAV 81 SRF D W S H H EL+YV +G F +L + ADD+++I LH Sbjct: 22 SRF----DSDWHSTLHSHPF-AELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTE 76 Query: 82 ASDVNDPATTCTCALYGFQF---QGAEENQLLQPHS----------CPVIAAGQGKEVIK 128 SD + G +F Q A + + ++ AG+ + + Sbjct: 77 CSDAEGGLEYIVLGIDGVEFYTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMS 136 Query: 129 TLFNE-LSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILF 187 L E L +L + +T+SL D + G KD + + Sbjct: 137 ELIVENLLRVLVLNTMRRTTSLLDV-----------------ETSTGGDNKDCIFLE--H 177 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 YLN +YRE ITL+ L+ + Y+ H F ++ +SPI+Y++++RM EAK L NT+LS Sbjct: 178 YLNLHYRENITLDHLASLTFLNKFYLSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLS 237 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +IS VG+ + +F++ F SPS +R + K Sbjct: 238 ITQISDIVGFRSPSYFSQFFKNMECMSPSSFRNKHK 273 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 26/259 (10%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 WES H H +EL YV G F ++ + ++++I H SD N P Sbjct: 17 WESYPHTH-YFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIRHTEVSDKNSPLEYI 75 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS---SL 149 + G F + + L I E + F+ + + + K S + +L Sbjct: 76 VLGVEGLNFLIYNDKEYLN------IQCEDFSENLDFYFHTILREMDEQKESYETICQNL 129 Query: 150 WDAFAYTLA------ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 +A L+ + + K R E Y K+ ++++N+RE ITL+ L+ Sbjct: 130 LEALIIQLSRHTGSPVEMLPSSKKITR-ECSYAKR---------FIDSNFRENITLDTLA 179 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + + Y H FT+ Y I+P+NY+ Q+R+ ++ LT+T+L+QA I+ + G+ + +F Sbjct: 180 ELTHLNKYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFSSSSYF 239 Query: 264 AKLFLRHVGCSPSDYRRQF 282 ++ F + G +P+ YR+QF Sbjct: 240 SQCFRKICGMTPTAYRKQF 258 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 69/247 (27%), Positives = 110/247 (44%), Gaps = 12/247 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+ +EL+ V++G F +D Y +++ RG H S + P A Sbjct: 32 HRHETFSELLLVEEGRGTFVVDGKPYEVGPGTVLLYHRGIWHEEWS-THYPFRATYFAFK 90 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKE----VIKTLFNELSVILPQSKNSQTSSLWDAF 153 Q +G +N L P PVI G+ + +++ EL L +S+ + Sbjct: 91 DLQVKGCPQNYFLGPDQAPVIELGEKTDETASLVRECLAELHSGLAESRAAANHLFGLLL 150 Query: 154 AYTLAILYYENFKNAYRSEQGYIKK-DVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 A ++ E+ +E+ +K + + Y+ NY++ ITLEQL+K S Y Sbjct: 151 ARLARLVPGES------TERRIVKPAEAAVIKARGYIEENYQQPITLEQLAKVTFVSKYY 204 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + H F +E IS I ++IQ RM AK L T EI VGY++ F LF + G Sbjct: 205 LSHLFQQEVGISVIQFLIQCRMEAAKRYLIMTGRPVKEIGELVGYQSEPTFHNLFKKVTG 264 Query: 273 CSPSDYR 279 +P +R Sbjct: 265 LTPGQFR 271 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 107/268 (39%), Gaps = 32/268 (11%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 D W S H H TEL YV G F I + A+D V+I H S + P Sbjct: 29 DSDWHSTLHTHPF-TELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDSPL 87 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG------KEVIKTLFNELSVILPQSKN 143 + G F PV G ++ K + L+ ++ ++ N Sbjct: 88 EYIVVGIQGLSFSNL----------TPVDQGGHPFSFFNLRDEQKDILRYLNAMVQEATN 137 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV-----LIKDILF---YLNNNYRE 195 A +Y L + +V KDI F YL YRE Sbjct: 138 Q-------ALSYDLVCHNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRE 190 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 I LE L+ S YI H F KE +SP+ Y++ R+ E+K L T S ++++ V Sbjct: 191 SIQLEALASMTHLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIV 250 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRRQFK 283 G+ +F+K F + G SP+DYR +++ Sbjct: 251 GFTTPTYFSKQFRKITGISPTDYREKYQ 278 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 137/294 (46%), Gaps = 27/294 (9%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 ++ D + T K RL K E+ +H HD E+ ++ G ++ I L Sbjct: 7 EQLLDQLNPTFLFTWKGTRL---------KDEARYHSHDF-IEMAFILSGHGKYKIADRL 56 Query: 63 YVAHADDIVVIERGRLH-AVASDVNDPATTCTCALYGFQFQGAEENQLL--------QPH 113 Y DI+++ G+ H A+ +D ++PAT L +F EN L P Sbjct: 57 YDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPA 116 Query: 114 S-CPVI-AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFK----N 167 + P++ +G+ ++ + + +SV ++ + L L +L E + N Sbjct: 117 TQSPILHTSGELRQKLFKICTAMSVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKIN 176 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 S + KK V + I+ Y ++Y EKI+L+Q+++ S YI F E +PI Sbjct: 177 TGCSFESTSKKYV-VDQIVNYFEDHYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIR 235 Query: 228 YVIQRRMTEAKWSLTNT-ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ++I R+ +AK L N + S E++ +VGY++V HF+KLF + G PS RR Sbjct: 236 HLINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 23/259 (8%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W S H H TEL YV +G F I++ + DD++++ H S P + Sbjct: 32 WPSIPHTHAF-TELFYVSEGSGEFLIENQHFSIKKDDLIIVNPHIQHTEISLSASPLSYY 90 Query: 93 TCALYG--FQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 T + G F F +E Q+ H +LF EL + + Sbjct: 91 TVGVDGISFSFHDQKEFQIFHYHQ----KHADLLFYFHSLFQEL--------DEKNDGYE 138 Query: 151 DAFAYTLAILYYENFKNAYRSEQGY-----IKKDVLIKDILFYLNNNYREKITLEQLSKK 205 + +TLAIL + + A Q + K+ L+K YL+++Y + I LEQL+ Sbjct: 139 EICKHTLAILISQLRRFAVSDFQLFPSFHPSKECALVKR---YLDSHYSDDINLEQLASL 195 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 + Y+ HEFT+ Y ISPI+Y+ RR+ K L NT+ ++I+ G+ + + A+ Sbjct: 196 SHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTDHEISDIAHLAGFSSQSYLAQ 255 Query: 266 LFLRHVGCSPSDYRRQFKN 284 F ++ G + +YRR KN Sbjct: 256 SFRKYCGMTAGEYRRSKKN 274 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 18/257 (7%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 D +W S H H TE+ YV KG ++D+ Y DD+V++ H N Sbjct: 42 DHEWNSTLHTHL-YTEIFYVTKGHGLLSLDNKNYPVKEDDLVIVNPLISHTERGIENVNF 100 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK-EVI---KTLFNELSVILPQSKNSQ 145 + G + EE++ C + + K EV+ KT+ E+ ++K+++ Sbjct: 101 EYIVMGIEGVTYFSKEEDE---EQGCSIANYYEYKHEVLFYLKTILFEV-----KTKDTE 152 Query: 146 TSSLWDAFAYTLAI-LYYENFKNAYRSEQGYIKKD-VLIKDILFYLNNNYREKITLEQLS 203 SL L I L N S KD VLI+ Y++ +++E ITL+ LS Sbjct: 153 YQSLCQNLLEVLLINLMRRANINLKSSPINKANKDCVLIEK---YIDAHFKEDITLDTLS 209 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + + +I H F + ISPINY+IQ+R+ EAK L+ T L +EI++ VG+ + +F Sbjct: 210 ELTFLNKYHIVHAFKQYKGISPINYMIQKRLEEAKLLLSTTNLQISEIAYIVGFTSQSYF 269 Query: 264 AKLFLRHVGCSPSDYRR 280 A+ F + SP YR+ Sbjct: 270 AQAFKKATLTSPLQYRK 286 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 27/257 (10%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W S H H TEL YV+ G F I+ ++ DD+V+I H S + P + Sbjct: 32 WPSIPHSH-AFTELFYVRDGQGDFLIEDQIFPISKDDLVIINPHINHTEISKGSPPLSYF 90 Query: 93 TCALYG--FQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP-QSKNSQT--S 147 T + G F F G +E ++ + K + FN L L QS+ +T S Sbjct: 91 TVGVDGLCFSFNGHKEYRIFN--------CREKKTDLLFYFNSLFQELDRQSEGYETICS 142 Query: 148 SLWDAFAYTLAILYYENFK----NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + D L + F+ E +IK+ YL++NY E ITL+ LS Sbjct: 143 HMLDILILQLRRITDSPFELITAQHPSKECAHIKR---------YLDSNYGENITLDHLS 193 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + + Y+ HEFTK Y ISPINY+ ++R+ K L NT+ ++I+ G+ + + Sbjct: 194 ELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKELLENTDYGISDIAHLTGFSSQSYL 253 Query: 264 AKLFLRHVGCSPSDYRR 280 ++ F + G + YR+ Sbjct: 254 SQSFRKSCGMTAGTYRK 270 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 11/257 (4%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P E+ +H H++ EL ++ G + I+ Y +++ G H + N Sbjct: 28 PVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFEANTNCR 87 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK-EVIKTLFNELSVILPQSKNSQTSS- 148 L + + + V+ + K E++K+ L ++ Q +QTS Sbjct: 88 ELHIGLTNLNLFSNVKKDYIDIGNKNVLTFTKYKDEILKSC---LEIVEEQKTYNQTSPF 144 Query: 149 LWDAFAYTLAILYYE--NFKNAYRSEQGYI----KKDVLIKDILFYLNNNYREKITLEQL 202 + + L +L Y N ++ R + + +K L++ I YL NY E I+L L Sbjct: 145 MLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTEDISLYTL 204 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 SK S YI F + SPINY+IQ R+++AK L +++LS I+ VGY + + Sbjct: 205 SKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVGYSDPYY 264 Query: 263 FAKLFLRHVGCSPSDYR 279 F+KL+ ++ G SP+ R Sbjct: 265 FSKLYKKYYGVSPNKSR 281 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 24/258 (9%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H +E E IY++ G F I + + + + ++I LH + S + L+ Sbjct: 47 HWH-SELEFIYIESGNVVFDIGTVHFELNEGNGIMINSKILHRLQSSSD---AIIPNFLF 102 Query: 98 GFQFQGAEENQLLQPHSCPVIAAG--------------QGKEVIKTLFNELSVILPQSKN 143 F +++ + + + PVI++ + E+IKT +I Q Sbjct: 103 QPSFIAPQDSLIYKKYINPVISSSLEYLVFQPDIPWQKKALEIIKT------IIAVQETE 156 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + L IL EN G + ++ ++ Y++ +Y E ITLE ++ Sbjct: 157 FNREIIVSMSVQQLWILLLENLTFDQFENMGAVISRTRLQLMMQYVHAHYSENITLEDIA 216 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + S S H F +++P+ Y+I R+T+A L NTE A IS G+ NVDHF Sbjct: 217 RTANISKSTALHLFQNNLKLTPVKYLINYRLTQAALLLINTEEKIATISNNTGFNNVDHF 276 Query: 264 AKLFLRHVGCSPSDYRRQ 281 + F + +P+DYR Q Sbjct: 277 CRTFKKTYKMTPTDYRNQ 294 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 14/253 (5%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W+S H H +EL YV G F I++ ADD+++I H + NDP T Sbjct: 32 WQSHPHTHQ-FSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEHTEKTMSNDPMTYI 90 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 + G F +N P G K T F S I+ + N++ ++A Sbjct: 91 VFGVEGLAFYFNSQNAA-NPKGYSYYNYGSAK----THFINFSQIMIKEFNARKPG-FEA 144 Query: 153 FAYTL--AILYY---ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + L +L Y E + I K+ + Y++ NY + ITL+ L++ Sbjct: 145 ICHGLLQVLLVYITREQHLSVISDTTLQISKECFVAKK--YIDANYAKNITLDLLAEITH 202 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + Y+ H FT+ SPINY+++ R+ +K L ++ S AE++ G+ + +F+++F Sbjct: 203 INKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSYFSQIF 262 Query: 268 LRHVGCSPSDYRR 280 ++ G SP YR+ Sbjct: 263 RKNTGMSPLQYRK 275 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 64/255 (25%), Positives = 119/255 (46%), Gaps = 19/255 (7%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E E++Y++KG A F +D Y + + G +H ++ N +L Sbjct: 37 HWHD-EFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSLS 95 Query: 98 GFQFQGAE--ENQLLQPHSCPVIAAGQGKEVIKTLFNE------LSVILPQSKNSQTSSL 149 +G + +++ LQ + + K +++ F + +S I+ K Sbjct: 96 MLFSEGPDICKSKYLQ-------SVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYE 148 Query: 150 WDAFAYTLAILYY---ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 Y I YY + + A +++ K IK L ++N+NY I ++ L+K Sbjct: 149 LLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLA 208 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S Y C F + ++P++Y+ + R+ +A + NT LS +EI++ VG+ NV +F K+ Sbjct: 209 NLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKV 268 Query: 267 FLRHVGCSPSDYRRQ 281 F +VG +P Y++ Sbjct: 269 FKEYVGVTPFKYKKN 283 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 26/264 (9%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E EL+ V +G A F +D Y A + + + G LH+ P + + Sbjct: 36 HWHD-ELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFH 94 Query: 98 GFQFQGAEENQLLQPHSCPVIA------------AGQGKEVIKTLFNELSVILPQSKNSQ 145 F + L + PV+ G G E++ L I +N Q Sbjct: 95 SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAML----DQIFEVHRNEQ 150 Query: 146 TSSLWDAFAYTLAIL--YYENFKNAYR---SEQGY-IKKDVLIKDILFYLNNNYREKITL 199 +S +IL K + R ++GY I++ +K ++ Y+ NY E I L Sbjct: 151 AASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIER---LKTVIEYIEQNYAEPIPL 207 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 ++L++ R S SY C F + SPI Y+ R+ +A L T+ E++ VG+ + Sbjct: 208 QKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNS 267 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFK 283 + +F +F + GC+P +YR + + Sbjct: 268 LSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 39/272 (14%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVN-------- 86 S H+HD+ EL Y+ G + I Y A D+V ++R +H Sbjct: 30 SADHLHDH-YELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHKTLDSGRPDHDRLVL 88 Query: 87 --DPATTCTCALYGFQFQGAEEN-----QLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 +P A+ +G +E +L+ P A+ + ++ + NE+ I P Sbjct: 89 YINPELFADLAVPPELAEGLKEPFGWDVPILR---LPSPASEAVERMVGDMVNEM--IHP 143 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ-GYIK----KDVL---IKDILFYLNN 191 Q+ +S W T+ +L + AYRS G ++ + VL + ++ YLN+ Sbjct: 144 QAGSS-----WLLRHRTVELLLF-----AYRSRHLGMVRSADTEPVLHPKTQAVVRYLND 193 Query: 192 NYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEI 251 NYR+ +TL ++++ FR S Y+ F + + +Y+ R+ EA+ L ++ S +I Sbjct: 194 NYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDI 253 Query: 252 SWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +WR G+ N HF K+F R V SP YR+Q++ Sbjct: 254 AWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 62/102 (60%) Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 +K L+ ++YL ++ E+ITLEQL++ + +Y+ F + PINY+IQ R+ Sbjct: 171 RKRNLVNHTIYYLETHHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNH 230 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 AK L N LS E++ VGYE+ HF+KLF ++ G SPS + Sbjct: 231 AKELLKNDSLSVKEVAKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMJ8_9FIRM Length = 283 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 20/277 (7%) Query: 19 TPRLSRFAFSDDPKWESGHHV-----------HDNETELIYVKKGVARFTIDSSLYVAHA 67 +P+ SRF P ES ++ H E+++++KG R + H Sbjct: 8 SPKQSRFEMGRRPHLESIENLNGATSFGTLKSHHEIAEILFIEKGHCRMHLKEGSLQLHT 67 Query: 68 DDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ-GKEV 126 DD++++ LH + + T T + G L + + V+ G+ G+ + Sbjct: 68 DDLILVNSDTLHDFKT--SSSFTAFTIHIGALHLCGLAPGHLTKSEAPLVLPLGKDGRHI 125 Query: 127 -IKTLFNELSVILP-QSKNSQTSSLWDAFAYTLAI-LYYENFKNAYRSEQGYIKKDVLIK 183 ++ L E+ ++ + ++ + + A A L I + ++A E IK Sbjct: 126 FLRQLLKEVKLLAALKGEDDERCEIGAALAQALVISVTALAEEDAGNEENPSFTMGTRIK 185 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 + Y++ +Y E + L +++ ++ Y+ H F SP+ Y+I+RR+ EA+ L Sbjct: 186 E---YIDAHYLEDLKLADIAEALHINLYYLSHTFKDLTGSSPMQYIIRRRIEEAQTLLLT 242 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 T ++ +I+ + GY N ++F +F VG P YR+ Sbjct: 243 TNMTITDIAMQCGYNNSNYFQSVFSNIVGMPPGKYRK 279 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 18/253 (7%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT---- 93 H HD E E+IYV+KG ID + + + G LH +++ + P T Sbjct: 35 HWHD-EMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLHMMSAP-DTPVDYFTFIFP 92 Query: 94 CALYGFQFQGAEENQLLQP---HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 FQ + A E+++ P H+ ++++ L L ++ ++ T Sbjct: 93 LEFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIPILDELVEENGKMGTHRQI 152 Query: 151 DAFAYTLAIL----YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 L ++ Y + R+ G ++K++L+ Y+ +NY + I L +LS+ F Sbjct: 153 QVRIRLLQMMDLLVEYSQLEELTRNASGELEKEILL-----YIQDNYHDNIGLAELSEHF 207 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S Y+ F++ + ++ YV R+ A+ L +T+LS EI+ + GY+NV +F + Sbjct: 208 HLSEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIAMKSGYQNVSYFIRR 267 Query: 267 FLRHVGCSPSDYR 279 F +G SP YR Sbjct: 268 FSSAMGESPLRYR 280 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 109/256 (42%), Gaps = 20/256 (7%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 D W S H H + TEL+Y+ KG F +++++ H SD N P Sbjct: 29 DKDWHSTIHAH-HFTELLYITKGKGTFIFYKEEIPVQEHNLIIVNPNIEHTEKSDTNHPL 87 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 + G F E + PV ++ LF L ++ + +N Q Sbjct: 88 EYIALGIQGLSFSSIE-------NPSPVTIHNYKQDQKNFLF-YLQQLVEEVENHQED-- 137 Query: 150 WDAFAYT-LAILYYENFK----NAYRSEQGYIKKDV-LIKDILFYLNNNYREKITLEQLS 203 +D L IL + + N ++ I KD+ IK+ Y+ ++ E I+L+ L+ Sbjct: 138 YDLIIQNILEILLLKMMRKKSFNVEKTSTQKINKDIEFIKN---YIKQHFHENISLDTLA 194 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + Y+ H F K +SPI Y+IQ R+ E+K L T S + IS G+ + F Sbjct: 195 SISHINKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTNYSISNISTITGFSSQSFF 254 Query: 264 AKLFLRHVGCSPSDYR 279 A+ F R SPS YR Sbjct: 255 AQSFKRETNLSPSQYR 270 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 43/274 (15%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P++ +H H E E+I + +G T+D + A +D++ + G LH+ +D Sbjct: 29 PRYVMSYHWH-VEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVHSGILHSGIP--HDCVY 85 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ----- 145 C + N L+ + PV E I+ + ++ +++ P + Sbjct: 86 QCIVF---------DMNTFLK--NNPVCG-----EYIQKILHQETMLFPHFSDEHPQILN 129 Query: 146 -TSSLWDAF-----AYTLAIL--YYENF----------KNAYRSEQGYIKKDVLIKDILF 187 S L+DA Y L + +Y F +N R+ + Y K+ + +K +L Sbjct: 130 CISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDY-KRILQLKQVLE 188 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 ++ NY ITL++LS S Y C F++ +P++Y+ ++R+ EA L T+ S Sbjct: 189 FIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDS 248 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 EI++R G+ ++ +F + F ++ G +P Y+R+ Sbjct: 249 ITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 35/276 (12%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +++ F +D W S H+H E+ ++ +G F ++ S D+++I LH Sbjct: 23 ITKSKFEND--WHSTAHIHP-FMEIFFITEGNGSFQLEDSTVNVKEYDLIIINPNCLHTE 79 Query: 82 ASDVN-DPATTCTCALYGF--QFQGAEENQLLQPHSCP--VIAAGQGKEVIKTLFNELSV 136 S++N P + F F + Q S VI + +I N+L++ Sbjct: 80 KSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHVINLKKNSSII---LNQLNL 136 Query: 137 ILPQSK------NSQTSSLWDAFAY-------TLAILYYENFKNAYRSEQGYIKKDVLIK 183 I+ + K S+ F +++IL +N K E IK Sbjct: 137 IIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSIL--QNEKKNLNLECAKIKN----- 189 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 YL+++Y E ITLE LS + + H FTK+ +SPI+Y+I++R+TEAK L Sbjct: 190 ----YLDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEAKSLLET 245 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 T S +I VG+ N +F+++F + SP Y+ Sbjct: 246 TNYSIKDIGSIVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 12/253 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDP---ATTCTC 94 H HD E E+IYVK+G TI Y+ D V+ G LH + S D Sbjct: 35 HWHD-ELEIIYVKQGKLHVTISGENYIGSPKDAFVVSPGSLHLMGSPTGDADYYTFLFPL 93 Query: 95 ALYGFQFQGAEENQLLQP-HSCPVIAAGQGKEVIKTLFNELSVILPQ--SKNSQTSSLWD 151 FQ E +L P ++ + Q + + L I Q KN++ + + Sbjct: 94 EYISFQTDDLMEKSILSPLKRGRLMISPQINDTAADICERLIEINEQISGKNAEKTDAAN 153 Query: 152 AFA-----YTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 A TL + ++N E G + K+++ Y+ NY +I+L++ +F Sbjct: 154 IEAQFETKITLIKFIRKMWRNGLILENGTNGTNTTEKEMITYIRQNYTREISLKEFGAQF 213 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S YI F + + I+ YV R+ A+ L + S E++ GY+NV +F + Sbjct: 214 HLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLLEESTASVTEVAMCSGYQNVSYFIRS 273 Query: 267 FLRHVGCSPSDYR 279 F + G SP YR Sbjct: 274 FKKMYGVSPLKYR 286 >UniRef50_A3DHR0 Transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DHR0_CLOTH Length = 310 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 61/105 (58%) Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 K+ ++ +I+ YLN N +KITLE L K F + + I EF KE + + Y Q RM A Sbjct: 198 KNSIVHNIIQYLNQNIDKKITLEHLEKTFACNRNQINKEFQKELNTTVMKYFTQMRMQLA 257 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L +TE+ E++ RVGY + +F+K F + G SPS+YR F Sbjct: 258 SILLRDTEIPILEVALRVGYSDAGYFSKTFKLYSGISPSEYRNSF 302 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 133/287 (46%), Gaps = 23/287 (8%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 +DN L++ +T LS + P ++ H H+ + ELIYV +G + I+ + Sbjct: 16 YDNPGVPLYI--RTGILSNY-----PDMKALCHWHE-DIELIYVIEGEMNYRINDRDILL 67 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI------- 118 D +V+ +LH + + C L+ A ++ Q + P I Sbjct: 68 KEKDCLVVNSRQLHYGYAHLRRECRF-ICILFHPGLLNASP-KIYQYYVAPFIENKNIAY 125 Query: 119 ----AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 A E ++ L N + ++ + K++ IL+ ++ K+ E Sbjct: 126 FHYAADSANHEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQH-KSLLEQEPA 184 Query: 175 YIKKDV-LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 Y D+ L K ++ Y+ +Y++ +TL+ ++ S S C F + R SPI++ + R Sbjct: 185 YDYSDLTLQKKMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFANKYR 244 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + +++ L NT S A+I+ G+ ++ +F+KLF R GC+P++YR+ Sbjct: 245 LEVSRYLLANTRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRK 291 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 12/252 (4%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W S H H TEL V GV F +++++Y D +++ H SD +P Sbjct: 32 WPSFMHTHP-FTELFLVTGGVGEFYVENNIYPLKKGDFILVNPNASHTEKSDEKNPLEYI 90 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS-LWD 151 A+ F + N L+ +C + +IK + S++ Q N S + Sbjct: 91 AVAVDNFSLNLTDTNHLM--FNC----ISKNPNIIKYM---DSMLAEQEGNKAYSDHICQ 141 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 + I K+ +E K + Y+++NY KIT++ L+K + Sbjct: 142 NILEIILIEILRITKSDIDTEPTVNASKECFK-LKKYMDSNYASKITIDDLAKLSNLNKY 200 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 Y+ H F K + SPINY+ R+ AK L N++ S ++IS G+ + +F + F++ Sbjct: 201 YLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQSTGFSSQSYFTQCFIKSC 260 Query: 272 GCSPSDYRRQFK 283 G SP YR + K Sbjct: 261 GLSPKAYRNRTK 272 >UniRef50_C5RES4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RES4_CLOCL Length = 290 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 23/192 (11%) Query: 94 CALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD-- 151 C+L F + EE+ + Q P A Q +VI +L EL S + W Sbjct: 112 CSLLPFIHE--EESSIRQIEIGPA-TARQIAKVIDSLQEELK--------SLNNDFWRCR 160 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDV--------LIKDILFYLNNNYREKITLEQLS 203 + ++ L IL++ + Y + + +V I +I+ YL+ +Y KI++E+L+ Sbjct: 161 SRSFLLEILFFLQY--IYTGTEDLTEHEVKKLSCENNQINEIILYLHTHYERKISIEELT 218 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 +KF + + + EFTK +S + Y+I+ R+ A L +T+L +EI++RVG+ ++ HF Sbjct: 219 EKFHVNRTTLTDEFTKATGMSTMEYLIRLRVKMAAIILRDTDLPISEIAYRVGFNDITHF 278 Query: 264 AKLFLRHVGCSP 275 ++F + VG SP Sbjct: 279 GRMFRKRVGYSP 290 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 75/284 (26%), Positives = 121/284 (42%), Gaps = 47/284 (16%) Query: 26 AFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVA 82 +FS+ K G+ H HD E ++ V KG F + Y+ + I R+H +A Sbjct: 28 SFSEIRKLSKGYVKLHWHD-EIQISIVTKGSVEFIVGEKSYILKNGQAIFINTQRIH-MA 85 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSK 142 V D C + F +LL+ +I VI + N+L+ I Sbjct: 86 KSVGDE----DCIYHAIMFNA----KLLKMFPGSIIEQKYIDPVITS--NKLNSIEIYGN 135 Query: 143 NSQTSSLW--DAFAYTLAILYYENFKNAYRSEQGYIK------------KDVL------- 181 N+ W DA Y I+ + ++ + YI KD+ Sbjct: 136 NN-----WEQDALKYISDIINVDIIQDKGYELKIYIDLLNFWLLLVLNDKDIFNQKMEPK 190 Query: 182 ------IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 IKD+L +++ NY KITL+ ++ S C F K ++SP +Y+I R+ Sbjct: 191 PINEQRIKDVLSFIHQNYSNKITLQDIADAVFVSKGECCRFFKKSLKMSPYDYLINYRIN 250 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 E+ L N+ LS +IS VG+ NV H+ ++F + G +P +YR Sbjct: 251 ESMKLLKNSSLSILDISENVGFNNVSHYIQIFKKKTGQTPLEYR 294 >UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax=Clostridium perfringens RepID=Q0SUX5_CLOPS Length = 279 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 20/242 (8%) Query: 48 YVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEEN 107 YV KG F + +Y DI ++ +G + ++DP Y F G+ N Sbjct: 43 YVTKGYGTFKFNGKVYTLKQGDIFILLKGMQVEYVASIDDP-----WEYYWIGFSGSNAN 97 Query: 108 QLLQ----PHSCPVIAAGQGKEVIKTLFN--ELSVILPQSKNSQTSSLWDAFAYTLAILY 161 + L +SC V + ++ + + N E+S SK+ L + ++ ++ Sbjct: 98 EYLNRTSITNSC-VANCKENSKIPQIILNMCEISKTYNPSKSDDILLLKELYSLLYTLI- 155 Query: 162 YENFKNAYRSEQGYIKKDV--LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTK 219 E F + Y K++ I+D L ++N+NY IT+++++ S SY+ F K Sbjct: 156 -EEFPKPFE----YKDKELHTYIQDALNFINSNYMHSITVQEIADYVNLSRSYLYKMFIK 210 Query: 220 EYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 ISP Y+I RM +A L T+L E++ VGY + F+K F +H SP +YR Sbjct: 211 NLGISPQRYLINLRMYKATLLLKGTKLPIGEVASSVGYSDSLLFSKTFSKHFSMSPLNYR 270 Query: 280 RQ 281 Sbjct: 271 NN 272 >UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KE68_BACHD Length = 278 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 70/111 (63%) Query: 180 VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 ++I+ ++ Y++++Y E +T+++L+ V + F K + PI+Y+IQ R+ AK Sbjct: 168 LVIEQVVEYIHHHYMEPMTVKKLADMSGMGVKPFSYLFKKYIGMFPIDYLIQYRLKRAKN 227 Query: 240 SLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQE 290 L ++ S A+I+ +GY + +F++LF +H+GCSP+ +R Q NC ++ + Sbjct: 228 LLVSSNSSIADIAESIGYLDALYFSRLFKKHIGCSPTAFRAQMGNCPSDDQ 278 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 35/293 (11%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 S + F+ + RF D W + H+ E++Y+K+G A F I +D Sbjct: 18 SSSTFIPVIVKTIERF---HDTSWHMEPNKHEC-FEMVYIKRGKAVFEIAGYPAEIGPND 73 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQ------------LLQPHSCPV 117 I++I+ + H + + C + F+F + Q + + P Sbjct: 74 IIIIKPNQPHKF---IVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPF 130 Query: 118 IA--AGQGKEVIKTLFNELSVILPQSKNSQTSS-------LWDAFAYTLAILYYENFKNA 168 I Q ++I L N IL + +N S + + F L E ++N+ Sbjct: 131 ITLKVSQKNDII-VLLNR---ILKERENPDIGSEFLNYLLVMELFVLISRALKME-WENS 185 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 +++ IK+ LI+ + Y+NNNY I+L+ +++ S SY F +E ISPINY Sbjct: 186 IKNKSPKIKE--LIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINY 243 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +++ R+ AK L +T+ ++I+ VG+ N F +F ++V +P YR+ Sbjct: 244 LLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKN 296 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 76.6 bits (187), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 76/291 (26%), Positives = 116/291 (39%), Gaps = 25/291 (8%) Query: 5 CFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYV 64 F SE LF R F S + H+H + EL Y+ G ++ I Y Sbjct: 7 LFYGDSEDLFFLEYNKRKGHFTMSVE-------HIH-GQYELYYLFSGERQYFIKDRKYP 58 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALYG---FQFQGAEENQLLQPHSCPVIA-- 119 A D+V+I LH SD P Y F+ G EE++LL P + Sbjct: 59 IAAGDLVLIPANELHKT-SDTGVPNHARIVLYYNEKYFEQYGKEESELLL---SPFLGSR 114 Query: 120 -----AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 A Q + + L L + + + A A L N G Sbjct: 115 RVFRLAHQERLRFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDG 174 Query: 175 YIKKD---VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 + +I Y+ +++RE +TL+ LS++F S SY+ F K Y+ Sbjct: 175 SVPPSPAAAKAMEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGI 234 Query: 232 RRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 R+ EA+ L T+ EI+ VG+E++ F ++F H+ SP DYR Q+ Sbjct: 235 TRVKEAQHQLRETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQY 285 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 24/265 (9%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 D W+ ++VHD+ ELI+VKKG F ++ A D+++I+ H N A Sbjct: 21 DSSWKMDYNVHDS-YELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFKA 79 Query: 90 TTCTCALYGFQFQGAEENQL------------LQPHSCPVIAAGQGKEVIKTLFNELSVI 137 GF + ++++ L+ S P K +F L I Sbjct: 80 EFIVM---GFYLKPESKSKIEALKEIYGFLESLENISSPFYFIHIRKR--SNVFFCLESI 134 Query: 138 LPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG--YIKKDVLIKDILFYLNNNYRE 195 L ++K ++ L + L I Y N ++G Y K IKD Y++ NY E Sbjct: 135 LQEAKENKKGLLLYIKSIELFI-YITREMNNLEIKKGFDYSKIAKFIKD---YIDQNYME 190 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 I + ++KK S S I F ++ I P Y++ +R+ +AK L+ + L +EI+ Sbjct: 191 DIKIGDIAKKLFMSESSISRLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMC 250 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRR 280 G+ ++ F +F ++ GCSP+ YR+ Sbjct: 251 GFSSLQRFNDIFKKYTGCSPTHYRK 275 >UniRef50_C9KNA0 Putative uncharacterized protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNA0_9FIRM Length = 230 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 11/186 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+ EL Y+ G I S LY D++V +G LH ++D C + Sbjct: 42 HCHEKNLELQYICGGRGNLRIGSRLYEVQEGDLLVYNQGELHDESADPEQGLWFYNCGVT 101 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN----ELSVILPQSKNSQTSSLWDAF 153 G G E +L+ P + P I AG+ V+++LF E+ LP KN Q + D Sbjct: 102 GLNLPGRPEGELIAPETSPRIHAGETAGVVESLFKLLYAEVERDLP--KNEQITH--DIL 157 Query: 154 AYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYI 213 ++++ Y+ K + +KD L+ Y++ ++ E++T+E+L+++ S+S Sbjct: 158 RVLISMILYQLPKERQLPSR---EKDRLLIACKDYIDGHFMEELTVEKLAERSHMSISGF 214 Query: 214 CHEFTK 219 H+F K Sbjct: 215 AHQFKK 220 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 14/254 (5%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY----G 98 E E+ YV G AR+ ID + + A DI +I LH++ N P T T + G Sbjct: 55 ELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPHHTDTLHFHLDMLG 114 Query: 99 FQFQGAEENQLLQP--------HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 + LQP C + + +G IK L ++ ++ Q + L Sbjct: 115 QSLVDPLSLRYLQPLQNSNFKFKQC-LRPSDEGYTEIKDLLFKIFKMIRQKERHYELLLK 173 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 + +LY+ S+ Y +K+ I++I+ Y+N +Y E +T+E+LS+ S Sbjct: 174 SKLEELIYLLYFYRLVERKTSDDHY-RKNEKIREIIDYINQHYAENLTIEKLSELMGYSK 232 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 ++ F + S ++IQ R+ A L N+ EI+ VG+ N+ +F + F + Sbjct: 233 THFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNNLSNFNRQFKHY 292 Query: 271 VGCSPSDYRRQFKN 284 +PS YR+ N Sbjct: 293 YDQTPSQYRKTHSN 306 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 11/257 (4%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA------VASD 84 P++ +H H+ E ELI++ G TI+ + A DI+++ G LH V Sbjct: 29 PQYAMPYHWHE-ELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTPYDCVYEC 87 Query: 85 VNDPATTCTCALYGFQFQGAEENQ-LLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 + P + + Y +F + Q L+ P AG + L +++ + Sbjct: 88 LVFPVSLLSSQTYASEFLNRLDRQDLILDEYFP---AGDDTAIHSLLERLFALMQDSDEG 144 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + L + + +L + + +S+ + L+K++L Y+ +Y EKITL +L+ Sbjct: 145 GKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITLHELA 204 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + S Y CH F++ +PI+YV R+ A L S +I+ G+ +V +F Sbjct: 205 RTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFNDVSYF 264 Query: 264 AKLFLRHVGCSPSDYRR 280 + F ++ G SP Y + Sbjct: 265 TRAFKKYKGISPGQYLK 281 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 60/100 (60%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K I ++ N E +TLEQL+K +Y+ F K + + P+ Y+ ++RM +AK L Sbjct: 178 LKQIEAFIEANLSEALTLEQLAKHVHLHPNYLVRYFNKHFAVPPLKYLNRKRMQKAKSLL 237 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 T+L+ EI+ VG+ + +HFAK F + CSP++YR + Sbjct: 238 GTTDLAIKEIAELVGFPDTNHFAKAFRKEASCSPTEYRHR 277 >UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides RepID=A6KYC9_BACV8 Length = 298 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 11/244 (4%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G F +D Y A+ ++ + HA S+ +P T +Y F G + Sbjct: 61 LIYCMEGEGWFELDKHQYAVTANQFFILPEHQAHAYGSNEENPWT-----IYWIHFNGTK 115 Query: 106 ENQLLQPHSCPVIAAGQGKEVIK---TLFNEL--SVILPQSKNSQTSSLWDAFAYTLAIL 160 P Q IK LF E+ S+ SKN + F + ++ Sbjct: 116 AAFFSAGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLGSMK 175 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 + +++ Y KDV ++ + ++ N + I L ++ + SVSY + F ++ Sbjct: 176 FIGEYRDCGSMRNSYRNKDV-VQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLFEEK 234 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 SP+ Y+ R+ EA L T L +IS VGYE+ +F++LF + +G PS Y+ Sbjct: 235 TGSSPLRYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSAYKE 294 Query: 281 QFKN 284 + K Sbjct: 295 KKKG 298 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 18/282 (6%) Query: 20 PRLSRFAFSDDPKW-----ESGHHVHDN-----ETELIYVKKGVARFTIDSSLYVAHADD 69 P + RF +P W G+H D E Y+ G +F I S+Y + D Sbjct: 7 PNILRFGSISEPLWIEFDRRIGYHSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGD 66 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQF----QGAEENQLLQPHSC--PVIAAG-Q 122 ++++ +H S+++ P Y F E LL P + P+I Q Sbjct: 67 LILVNTNDVHR-TSELSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQ 125 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI 182 + ++ LF L L + + + L K + Sbjct: 126 ERMHLEALFESLLRELQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTPVQQKV 185 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 DI+ ++N ++RE + L++L+K+F S ++ F + Y+ R+ EA+ L Sbjct: 186 TDIIRHINQHFREPLPLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLK 245 Query: 243 NTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 T+ S +IS R G+EN HF K+F G SP DYR+ +N Sbjct: 246 ETDWSITQISERCGFENFSHFGKVFKELSGLSPRDYRKLEQN 287 >UniRef50_B1QUU6 Two-component response regulator n=3 Tax=Clostridium butyricum RepID=B1QUU6_CLOBU Length = 351 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 63/103 (61%) Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 ++L+ +L Y++ NY EKITLE +SK SV Y+ F K + I+Y+ ++ +AK Sbjct: 243 NILLNPVLIYISENYSEKITLESVSKACNLSVFYLSKLFKKNTGMKFIDYINLYKIEKAK 302 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 L NT++S IS +GY+ +F+K+F + VG +PS YR + Sbjct: 303 QLLENTDMSIINISMSLGYDESGYFSKVFKKVVGVTPSAYRNK 345 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 13/263 (4%) Query: 38 HVH-DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H +E E IY++ G A F I + + A + + I G LH A V+D + + Sbjct: 34 HCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHG-AYPVSDKPFSLYATV 92 Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNE--LSVILPQSKNSQTSSLWDAFA 154 F + L+Q + IK +S +L + + + Sbjct: 93 VHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQQKEEG 152 Query: 155 YTLAI------LYYENFKNAYRSEQ---GYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 Y L I + E K+ R+E+ G ++ IK +L +++ +Y EK+T++QL+ Sbjct: 153 YELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQLANL 212 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 + S + F R++ + Y+ +R+ +A L T+ + +IS VG+++ +F K Sbjct: 213 VQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSYFIK 272 Query: 266 LFLRHVGCSPSDYRRQFKNCFAE 288 LF RH C+PS++RR F+E Sbjct: 273 LFKRHKRCTPSEFRRIGLPTFSE 295 >UniRef50_A6M1Y0 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1Y0_CLOB8 Length = 267 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 72/114 (63%), Gaps = 6/114 (5%) Query: 171 SEQGYIK----KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 +EQ Y K KD+ + DI +++ NY E+I L +LS+++ VS I + F K ++ PI Sbjct: 155 TEQNYKKILTEKDI-VADISKFISENYMEEINLNKLSERYGEKVSRISYLFNKHLKMRPI 213 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +Y+IQ R+T A ++L N L+ ++S +VGY + +F++LF + G SPS ++ Sbjct: 214 DYLIQYRLTMA-YTLLNKGLTIKDVSKKVGYNDEFYFSRLFKKKFGVSPSKLKK 266 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 25/270 (9%) Query: 18 KTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGR 77 K P+L F W G + +++YV G A F D V + +V+ + Sbjct: 53 KRPKLPTF-------WAKGRR----DYQILYVASGKAHFWFDGVEEVVTSGHMVLYQPKE 101 Query: 78 LHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCP----VIAAGQGKEVIKTLFNE 133 + V D ++ F G + +L H P V +G + K LF + Sbjct: 102 IQKYVYYVEDHP-----EVFWIHFTGYDVKNILNYHGIPLDKHVFYSGTLPDY-KMLFRK 155 Query: 134 LSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNY 193 + L Q + D A I+ + + SE+ I+ + Y N NY Sbjct: 156 IIRELQQCEYGYE----DYIASLFNIILFLVSRQQQESEKTTTSIPEEIEAAVAYFNENY 211 Query: 194 REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISW 253 K++++ ++ S ++ F + +ISP Y++ RM A+ L NTE + EI+ Sbjct: 212 NTKVSVDDYAESLHISTNWFIRNFKQYMKISPAQYILSLRMVNAQSLLENTEYNIGEIAE 271 Query: 254 RVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 VGY+N +F+++F + G SP+ YR+ + Sbjct: 272 IVGYDNPLYFSRVFKKEYGVSPAQYRKNLE 301 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 7/138 (5%) Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 +L + F +T+ + + R E +++ I+ Y++++Y+E ITLEQL++KF Sbjct: 155 TLLNMFLFTMLM-------HTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFY 207 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 S Y+C EF + + + YV R+ A+ L T+ + EIS G+ N+ HF ++F Sbjct: 208 VSQFYLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVF 267 Query: 268 LRHVGCSPSDYRRQFKNC 285 G +PS YR+ +N Sbjct: 268 KSVTGTTPSGYRKHHQNM 285 >UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHI4_CLOPH Length = 259 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 21/250 (8%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC----- 92 H+H E E++ +KGV T + + DI++ +H+ + C Sbjct: 25 HLHK-EIEILICQKGVVEATCNGQTLLLEESDIMIALPNTIHSYETKEYCEYILCILSPS 83 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 T L+ FQ + + P + Q K++ T F + ++L + +N + L + Sbjct: 84 TLPLFKPYFQ--------KEFTTPFLQMDQTKKI--TPF--VRMLLEEWENDRNQELMIS 131 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 + L++++ KN +E+ + ++ IL Y++ +Y E+ +LE L+ + SY Sbjct: 132 Y---LSVIFSLILKNTTFTEKATSTYEDILPSILLYVDEHYLEQFSLEDLASHLGFNPSY 188 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + F++ + +YV++ R+ AK L NTE S EI++ G+ F ++FL+ V Sbjct: 189 VSRLFSERVHCTLTHYVMELRVNYAKHLLQNTEKSITEIAYECGFATQRSFNRVFLQLVN 248 Query: 273 CSPSDYRRQF 282 +P +YR+ + Sbjct: 249 TTPREYRKTY 258 >UniRef50_A6CLV0 AraC-type DNA-binding domain-containing protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CLV0_9BACI Length = 525 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 68/112 (60%) Query: 171 SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 S+ Y K+ ++ I YL NY+E I L++++ +F S YI +F ++Y + +Y+ Sbjct: 410 SDAKYQKEKNSMQRIEEYLQKNYQEDINLQEIADRFYLSREYISRKFKQDYDATITDYLT 469 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 RM +AK L N L E+++ VGY+N +F+K+F +H G +P++YR+ + Sbjct: 470 SIRMEKAKNLLKNPYLKIYEVAYGVGYQNEKYFSKVFKKHEGVTPNEYRQSY 521 >UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB33_LEPBD Length = 283 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 25/265 (9%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P SG+ +H Y+K G F + A + IE + +D +P Sbjct: 33 PTTRSGYMLH-------YIKSGKGTFYSRGKTFHLKAGEFFFIEPEEIIWYEADEYEP-- 83 Query: 91 TCTCALYGFQFQGAEENQLLQPHSC----PVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 A Y F+G ++ L+ S P+ +A +G ++I+ +++ I S S+ Sbjct: 84 ---WAYYWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIR---DKIVEIFEISVISED 137 Query: 147 SSLWDAFAYTLAILYY--ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 + L A L ILYY E F Y + K+ ++ L + NN+ + + +++K Sbjct: 138 NDLL-LNARLLEILYYLSECFPLTYAKKDS---KNTILAKALQIMRNNFDTSVHISEIAK 193 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 +Y+ F ++ +I+P +Y+ R+ +AK LT T+ I+ VG E+ +F+ Sbjct: 194 ALYIDRTYLHRIFKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFS 253 Query: 265 KLFLRHVGCSPSDYRRQFKNCFAEQ 289 KLF SP +YR+ +KN F Q Sbjct: 254 KLFKNKENISPINYRKSYKNSFENQ 278 >UniRef50_A4J4N3 Transcriptional regulator, AraC family n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4N3_DESRM Length = 240 Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 59/96 (61%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ N+Y+EKI+LE L+ + SY C F K+ +SP+ ++ + R+ +AK+ L NT+ S Sbjct: 144 YVQNHYQEKISLEYLAALEHYNPSYYCQWFQKKTGLSPLAFIQKLRLEKAKYLLINTDFS 203 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 I+ VGYE A+LF + G S SDYR+ F+ Sbjct: 204 LLRIAQEVGYEQQSSLARLFRQKEGMSASDYRKAFQ 239 >UniRef50_C6QRS7 Two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRS7_9BACI Length = 269 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 70/110 (63%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 +I+ L Y+ NY+ ITLE++++ S Y+ F KE +++ ++YV +++M +AK Sbjct: 149 VIQSALNYIEENYQNGITLEEVAEHVHISPFYLSKLFKKELKMNFVSYVTEKKMQKAKEL 208 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQE 290 L NT+L I+ + Y+ ++F+K+F + VG +PS+YR++ K ++++ Sbjct: 209 LENTDLPVIHIALELNYQEPNYFSKVFKKVVGITPSEYRKRSKKGLSKKK 258 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 26/255 (10%) Query: 45 ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTCALYGFQFQG 103 ELIYV+ G +TI + D++ + G LH+ AS + N+P T +Y F Sbjct: 40 ELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFT-----VYALVFNP 94 Query: 104 AEENQLLQPHSCPVIAA-GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAF-----AYTL 157 + L +PH ++A G +I + + + P K + T L F Y L Sbjct: 95 SILG-LKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQT-TLRLAGEFEQKPRGYEL 152 Query: 158 AILYY---------ENFKNAYRSE---QGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 A+ Y F RS+ + + K++L L ++ E++T+EQ + Sbjct: 153 AVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAASF 212 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S + C F K + + Y+ R+ A++ L NT +S +I+ +G +++ F+K Sbjct: 213 VHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSFSK 272 Query: 266 LFLRHVGCSPSDYRR 280 LF + G SP D R+ Sbjct: 273 LFRQLRGVSPRDLRK 287 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 35/295 (11%) Query: 13 LFV-AGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 LF+ A K P RF+ G H HD E+ Y+ G + I +Y A D+V Sbjct: 14 LFIEAAKQP--GRFSMD-------GEHFHDA-WEIYYLVSGERCYFIKDQIYRIGAGDLV 63 Query: 72 VIERGRLHAVA--SDVNDP--------ATTCTCALYGFQFQGAEEN--QLLQPHSCPVIA 119 +I LH + ++ P T AL G EE QL + ++ Sbjct: 64 LIPVNVLHKTSPSGKLSQPHERILVNFRTEVVSAL----LPGREEELEQLFAKYPVLRLS 119 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD 179 A + + V + L L+ Q+ + L +L N + + E+G K+ Sbjct: 120 AEEQQLVQQLLARMLAEQKQQAGGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRP 179 Query: 180 VL-IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 I ++ Y+N +Y E ++L L+ +F S Y+ H F + ++ + Y+ + R+ EA Sbjct: 180 YREIAEVARYINAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEAC 239 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILS 293 L TEL EI++RVGY++ HF ++F + SP YRR EQ +LS Sbjct: 240 ALLRETELPVTEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRR-------EQRMLS 287 >UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN84_9FIRM Length = 297 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 10/251 (3%) Query: 36 GHH---VHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 GHH ++ + ++ G ID + A D +I G++ A+D DP Sbjct: 51 GHHYGPIYRAYQLIHFILSGKGVLEIDGHTFQLGAGDAFLIPSGKIAYYAADAADPWCYT 110 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 G Q QL+ P I G + L ++ + + + T+ + Sbjct: 111 WINFLGINSQ-MYTYQLIASSPEPYILRGLDTQKYHALIEQILSL----EGTATARYFKG 165 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 L +L E F++A E+ Y K+ + + FYL+ NY EK+ L++++ +Y Sbjct: 166 NGLLLQVLG-ELFQDAGFDER-YWGKNSVADETKFYLDVNYSEKLKLKEVAHNLGVHPNY 223 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + F ++Y ++P Y++ ++ +A L T+L A I+ +G+++ F+KLF + Sbjct: 224 LTRVFHEKYGVTPKQYLLNLKLQKACQLLRTTDLPVAVIAGSMGFDDGMAFSKLFKKTYS 283 Query: 273 CSPSDYRRQFK 283 C+PSDYRR+ K Sbjct: 284 CAPSDYRRKEK 294 >UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=3 Tax=Enterococcus faecium RepID=Q3XWE2_ENTFC Length = 288 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 69/105 (65%) Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 K + +++I YL+++Y +KIT++QLS +F + Y+ F + Y I+ +NY+ Q+R+T+A Sbjct: 184 KRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKIFRETYGITIVNYLNQKRITQA 243 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 K L T LS EI+ ++G + ++F++ F + G PS++R+ + Sbjct: 244 KHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPSEFRKMW 288 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/99 (39%), Positives = 62/99 (62%) Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 ++YL N+Y+E+ITLE+L++ S +Y+ F + +SPINY+I+ R+ AK L N Sbjct: 180 VYYLENHYKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNEN 239 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 L+ E++ VGY++ HF+K F + G SPS + KN Sbjct: 240 LTIKEVASAVGYQDAYHFSKSFKKLYGVSPSGVLPKPKN 278 >UniRef50_C4FY13 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY13_9FIRM Length = 271 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 60/95 (63%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ NY +KITLE+LS + Y+ F ++ +SPI+Y+I R+ EA+ L + ++ Sbjct: 170 YIRKNYSKKITLEELSDLVDINKYYLIRLFKQQTGLSPIDYLIHVRLEEAEKLLAKSNIT 229 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++IS RVG+ + HF+K F + C+PS YR+++ Sbjct: 230 VSDISDRVGFHSPSHFSKTFKENNHCTPSQYRKRY 264 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 13/255 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H E EL+YV G + I S + D+++I H +D T+ + Sbjct: 38 HYHP-EIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTSESVVQM 96 Query: 98 GFQFQGAE---------ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS 148 F G++ QL + + G K K + ++ ++ +S + + Sbjct: 97 KTDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAK---KKIGEKIEILEYKSDFQRLLA 153 Query: 149 LWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRA 208 + + + Y+ + S + K++ I I ++ NYRE I+LE+++ Sbjct: 154 ILNILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKENYREPISLEEMADLTHM 213 Query: 209 SVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFL 268 +V C F K + + +V + RM A L+ E+S EI + G+ N HF K F Sbjct: 214 TVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFSHFNKSFK 273 Query: 269 RHVGCSPSDYRRQFK 283 G SPS+YR Q K Sbjct: 274 AFTGMSPSEYRNQLK 288 >UniRef50_C7GHF1 Putative two-component response regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF1_9FIRM Length = 517 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 1/163 (0%) Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL 181 Q KE L+N ++ P + + + Y + + + E F+ S G ++ + Sbjct: 355 QIKEQANRLYNGANIPFPSNADIIRLIEEKYYLYEIILYFTEQFE-MIMSSIGNSSRESV 413 Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 + DIL Y+N+NY ITLE ++ F + SY+ F K+ + +YV R+ + L Sbjct: 414 LDDILHYINHNYASNITLENIAPLFGYNSSYLGKIFRKKMGENFNSYVDHVRIKHSMELL 473 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 ++EL I+ +VGY NVD+F F ++VG SP++YR++ KN Sbjct: 474 CSSELKVYAIAEKVGYRNVDYFHIKFKKYVGKSPAEYRKEHKN 516 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 11/263 (4%) Query: 21 RLSRFAFS-DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 +L AFS D+ W+S H H + TEL++V G F+ + D+V+I H Sbjct: 19 KLLSIAFSKDEGDWKSIMHTH-HFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEH 77 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNE-LSVIL 138 S N P + G F ++ + Q V + I LF + L I Sbjct: 78 TERSSQNHPLEYYVLGIDGISFLSQKDRECAQ-----VFCNFEHDPSIHELFRQMLYEIR 132 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 SQT L I+ + + K+ IK+ YL++NY E IT Sbjct: 133 TAQYGSQTICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKE---YLDSNYAEHIT 189 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L+ L+ + Y+ H FTK +SPI Y+ Q R+ A+ L NT S ++I+ G+ Sbjct: 190 LDTLTGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFS 249 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQ 281 + +F ++F ++ +P YR++ Sbjct: 250 SQSYFTQIFRKNFNMTPVKYRQE 272 >UniRef50_A6GDR8 Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDR8_9DELT Length = 174 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 2/116 (1%) Query: 167 NAYRSEQGYIKKD--VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 +A +EQ + D ++ ++ Y E + LE+L++ S + F +E+ ++ Sbjct: 21 SAASAEQARVVADTRARLERARSLMHGRYAEPLDLERLARAAHFSRHHFVRSFRREFELT 80 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 P Y+ QRR+ AK L TELS E+ VG+ ++ F+ LF RHVG +P+ YRR Sbjct: 81 PHQYLTQRRVAAAKELLEGTELSVTEVCLAVGFSSLGSFSTLFRRHVGHAPAHYRR 136 >UniRef50_C0CZ81 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CZ81_9CLOT Length = 305 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 14/229 (6%) Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCA-LYGFQFQGAEE--NQLLQP--HSCPV 117 Y HA DIV++ LH P+ LY ++ + +++L+P P+ Sbjct: 68 YSIHAGDIVLLRPSLLHKTIYPQGAPSRRLIINFLYPQEYLDSHPAFSRILEPFGQEIPI 127 Query: 118 IAAGQGKE-VIKTLFNELSVILPQSK-----NSQTSSLWDAFAYTLAILYYENFKNAYRS 171 Q K ++ + N++ ++ +S N+ + + F Y L L +F N Y Sbjct: 128 FRFDQEKTAILSDMLNQVFLLSTRSMPADILNTMVHAEFTRFLYRLWEL--RSF-NVYVP 184 Query: 172 EQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 E+ I I Y++N+Y E+++LE L+++F S Y+ H F + + I+Y+ Sbjct: 185 EKFESPLSEKIYQITSYIHNHYSEELSLESLAEQFYISTYYLSHRFRQVTGYTLIHYIQM 244 Query: 232 RRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 R+ A+++L NT +IS G+ + F ++F + G SPSD+RR Sbjct: 245 TRIRSAQYALINTREKITDISAACGFTSFSQFNRVFRKFCGVSPSDFRR 293 >UniRef50_C6D3P9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3P9_PAESJ Length = 483 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 4/122 (3%) Query: 162 YENFKNAYRSEQGYIKKDVL---IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 +E KN + E G V+ +K ++ Y++ ++ E I L ++K+F S+SY+ Sbjct: 362 FERLKNGFELE-GTPDLPVISGQVKAVMDYIDTSFTEDIMLGAIAKRFNLSLSYLSFLIK 420 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 KE S +Y+ +R+ AK L + +S E+ RVGY++ HF KLF +HVG +PS + Sbjct: 421 KEAGTSYSDYITGKRIALAKELLKESSISVHEVVERVGYKDYFHFNKLFKKHVGLTPSKF 480 Query: 279 RR 280 R+ Sbjct: 481 RK 482 >UniRef50_B8I8I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I8I4_CLOCE Length = 300 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 60/102 (58%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 +IK Y++NN + +TL L+++ S ++ C F +SP +Y+IQ RM AK Sbjct: 190 IIKSSQKYIDNNLHKDLTLLDLAERCGVSKNFYCKIFKSIIGLSPFDYIIQSRMNTAKRL 249 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 LT T + ++IS G N+ +F KLF +HV +P+++R +F Sbjct: 250 LTTTNMKISDISIMCGINNITYFHKLFKKHVNMTPANFRERF 291 >UniRef50_C7GBP3 DNA-bindng response regulator, AraC family n=2 Tax=Roseburia RepID=C7GBP3_9FIRM Length = 534 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 4/124 (3%) Query: 163 ENFKNAYRSEQGY----IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 E +N R GY K+D + I Y+++++RE+I ++L++ + Y+ F Sbjct: 405 EYVENLIRKAVGYKLYITKEDSVADQICTYIDSHFREEIHRDELAELVYLNTDYMSRMFK 464 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 KE +S NY++Q+R+ EAK L + L +S +GY N +F K+F + G +P +Y Sbjct: 465 KEKGVSISNYILQKRVDEAKKLLCGSSLPINTVSLHIGYSNFSYFTKMFKENTGLTPLEY 524 Query: 279 RRQF 282 RR+F Sbjct: 525 RRKF 528 >UniRef50_B7RYN5 DJ-1/PfpI family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYN5_9GAMM Length = 330 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 63/117 (53%) Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 AY+++ + D +I + +L +N + TL L+ KF S + F + +SP Sbjct: 206 AYQTDDNHSHHDEVIMEAQHWLQDNLPDSPTLTTLAAKFGLSTRTLNRRFHQATGMSPQA 265 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 ++ + R+ +AK L ++ LS AE+ W++G ++V HF KLF HV +P YR + Sbjct: 266 WLQRMRIHQAKELLRHSNLSIAEVGWQLGLQDVSHFGKLFREHVAMTPGAYREAVRG 322 >UniRef50_C2BII1 AraC family transcriptional regulator n=3 Tax=Anaerococcus RepID=C2BII1_9FIRM Length = 282 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 26/248 (10%) Query: 48 YVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEEN 107 Y+ +G R TI++ +A D+++I H + D + GF + Sbjct: 48 YLDEGFGRLTIENDNIEVNAGDLIIINSNVGHTLHLD----KSISNVKYLGFGIESVSIA 103 Query: 108 QLLQPHSCPVI--------AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAI 159 L S + A + ++ + + E +S + SL +A A TL I Sbjct: 104 GLDDDESKSINYFHIDNRNKALRFEDYFEDIHREY-----KSNDIFARSLANATATTLVI 158 Query: 160 LYYENFKNAYRSEQGYIKKDVLIKD----ILFYLNNNYREKITLEQLSKKFRASVSYICH 215 N YR + IK+D + I Y+++NY E I LE LS + ++ Sbjct: 159 ----NLLRKYRKDIT-IKRDKKVNRQIDYIKSYIDSNYSEDIKLEDLSAMAYMNKFHLIS 213 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 EF + YRI+PI Y+I +R+ AK L +T S EIS VG+ + +F ++F + G +P Sbjct: 214 EFKQSYRITPIEYLILKRIEIAKSLLISTNHSMEEISAMVGFNSQSYFNQVFKKKAGQTP 273 Query: 276 SDYRRQFK 283 S +RR+ + Sbjct: 274 SQFRRKHR 281 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 34/267 (12%) Query: 35 SGH---HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 SGH H HD E + +++ +G A F I+ D V I G LH +A D N TT Sbjct: 37 SGHIPLHWHD-EFQFVFILEGEAEFHINEETICLKEGDGVFINCGCLH-MAKDAN--GTT 92 Query: 92 CTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK------------------EVIKTLFNE 133 CT N+L P + A Q + I+ L +E Sbjct: 93 CTYLCLNVSPHFITANELFTTFVHPYMHASQTPYILLNRKDHWPNHIYQCIQTIQRLIDE 152 Query: 134 LSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNY 193 N Q ++W L F+ Y + Q K+ +K +L +++ +Y Sbjct: 153 TPAYYELELNIQLITMWKC-------LLQNGFQIKYDARQH--DKNERMKPMLNWIHQHY 203 Query: 194 REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISW 253 EK+ L+ +++ + S S C F + +P++YV + R+ ++ L T+ + EI++ Sbjct: 204 HEKVLLQDIARAGQLSRSECCRYFKDILKKTPLHYVNEYRVQQSLILLQETDFNITEIAY 263 Query: 254 RVGYENVDHFAKLFLRHVGCSPSDYRR 280 +VG+ + +F +F R +P YR+ Sbjct: 264 KVGFNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 35/263 (13%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 S H HD EL Y+++G I LY H + ++ +H N P Sbjct: 21 SKSHYHD-YFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRL-- 77 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIAAGQG--------KEVIKTLFNELSVILPQSKNSQT 146 L F + + QLL+ V+ G G K+V+ + ++L L + + Q Sbjct: 78 -LVYFSKEEVDSVQLLK-----VLEKGTGVYKPDQREKQVVHRMLDDL---LKEQDDPQA 128 Query: 147 ------SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLE 200 +L + T+A N + + E K I D++ Y++ NY+E I+++ Sbjct: 129 YHEDYIHTLLNMALLTIA----RNIQTPVKPE-----KRNRITDVISYIHQNYQEDISID 179 Query: 201 QLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENV 260 QL++ S Y+C EF + + I YV R+ A+ T + EIS G+ N+ Sbjct: 180 QLAQMSYVSPYYLCREFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNI 239 Query: 261 DHFAKLFLRHVGCSPSDYRRQFK 283 HF ++F +G +PS++R+ +K Sbjct: 240 THFNRVFKSVMGMTPSNFRKMYK 262 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 10/240 (4%) Query: 45 ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA 104 E+ Y+++G + I+ S Y+ D+ ++ +H + + P L F + Sbjct: 37 EIYYLEQGRRQHIIEDSQYILQPDEFIIFPPFVMHHSFEENDVPFRRL---LLYFNPEVI 93 Query: 105 EENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS--LWDAFAYTLAILYY 162 Q+L+ S + ++N + IL + + S L LA+ Sbjct: 94 RSPQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQERDDLYSRELITLMVNALALQLV 153 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 N A R EQ + DI+ YL+ ++ E ITLEQL+ F S ++C EF + Sbjct: 154 RNSDEAARPEQ-----RNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRYTS 208 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + + Y+ R+ A+ L ++ S EIS RVG+ NV HF +++ G SPS ++ + Sbjct: 209 STIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQAY 268 >UniRef50_C9A627 Transcriptional regulator n=3 Tax=Enterococcus casseliflavus RepID=C9A627_ENTCA Length = 293 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/92 (40%), Positives = 57/92 (61%) Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 L ++R+ ITLE L +++ + I EF+K + PI Y I +R++ +K L + LS Sbjct: 197 LEEDFRQGITLESLEERYHINKYQIVKEFSKYMGLPPIEYQISKRISYSKDLLRYSRLSI 256 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 EIS +G EN +F++LF + VG SPSDYR+ Sbjct: 257 KEISLAIGIENTAYFSRLFKKKVGISPSDYRQ 288 >UniRef50_C7PLK0 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PLK0_CHIPD Length = 330 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 64/105 (60%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I + L +L + E+I++E+L+++ S F +E I+P Y+ + R+ A SL Sbjct: 224 INNALSWLQTHLHEEISVERLAQEAAMSPRNFARIFVQELHITPARYIEKLRVELACRSL 283 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCF 286 T +L+QAEI+ + G+ N D+ K+FLR + +PS+YR++FK+ Sbjct: 284 TEKKLTQAEIALQSGFGNADNMRKVFLRVMEATPSEYRKRFKSAL 328 >UniRef50_C7G788 Transcriptional regulator, AraC family n=2 Tax=Bacteria RepID=C7G788_9FIRM Length = 292 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 63/101 (62%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K IL YL+ +Y E I+L+QL+++F S Y+ EF KE+ + I YV+ +R+ AK L Sbjct: 192 LKTILHYLDEHYTENISLDQLAEQFFISKYYLSREFKKEFGTTVIQYVLAKRINNAKELL 251 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + S EI+ G ++ +F K+F + GC+ S+YR+++ Sbjct: 252 RYSNSSIEEIAHLCGIDDASYFNKVFRKMEGCTASEYRKRW 292 >UniRef50_C6CWE7 Two component transcriptional regulator, AraC family n=3 Tax=Bacillales RepID=C6CWE7_PAESJ Length = 444 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 77/128 (60%), Gaps = 6/128 (4%) Query: 159 ILYYENFK-NAYRS----EQGYIKKDVLIKDILFYLNNNYREK-ITLEQLSKKFRASVSY 212 + YY +F N Y E+ + ++++ + Y+N NY +K +TL ++++ S +Y Sbjct: 317 VFYYGDFNWNQYSQRPTEEEFTAQTSLIVEKAMEYINQNYAQKGLTLHEVAQNNHVSPNY 376 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + + F KE + YV++ RM E+K L T++ + EIS +VGYE+ +HF+K+F ++ G Sbjct: 377 LSYLFKKETGYNLWEYVVKLRMEESKRLLLQTDMRRYEISEKVGYESPEHFSKIFKKYYG 436 Query: 273 CSPSDYRR 280 SPS+ ++ Sbjct: 437 MSPSELKK 444 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 14/257 (5%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G V N L Y G + +++ +Y A D +I + +D ++P T Sbjct: 6 PNYSYGPAVRPNYL-LHYCLSGQGEYHVNNQVYQIKAGDAFLIMPNVVTYYQADQHEPWT 64 Query: 91 TCTCALYGFQFQGAEENQLLQPHS----CPVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 + G + + + L H+ C I + + N+LS Q Sbjct: 65 YLWISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELFIQGQL 124 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + + A + I Y +N Y Y+ K + Y+ NNY+E +T+ +++ Sbjct: 125 YTFFSFLAKSANITYNDNVAPNYNP---YVDKAIE------YIQNNYQEMVTVNEIADYL 175 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 + SY+ F K +SP ++++ RM A+ LTNT+L+ +I++ GY N F+K Sbjct: 176 SLNRSYLTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKA 235 Query: 267 FLRHVGCSPSDYRRQFK 283 F +P DYR+QFK Sbjct: 236 FSNSHQMAPRDYRKQFK 252 >UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1I5_CLOBU Length = 284 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 67/271 (24%), Positives = 105/271 (38%), Gaps = 42/271 (15%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA--VASDVNDPAT 90 +E +H HD E YV G + ID Y+ ++ G H +N Sbjct: 27 FEGNYHCHD-FIEFSYVVSGNVNYKIDDKFYLIKEKTLLPFNAGVYHHEYFTKGINSNLK 85 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ---------------------GKE-VIK 128 + G N +L+ S + Q GKE V+K Sbjct: 86 ELHVGFRNLKIDGLPLNHILKNSSTVPMQFNQYGEDFHKCCLEIIEEHECSEIGKELVLK 145 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 +L +L + + N Y +N K + + K +++ I+ Y Sbjct: 146 SLVMKLIALFLKETN-----------------YVKNTKKIKQYSLPFYDKSNIVEIIIDY 188 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 NY I+L +SK S YI F ++ SPINY+I R+ +AK L TE+ Sbjct: 189 FEKNYMNNISLNDISKNMYISSVYISKTFKEKTGESPINYLINLRLQKAKDLLLETEMPV 248 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 I+ VGY + +F+KLF ++ SP+ YR Sbjct: 249 KIIAQSVGYSDAYYFSKLFKKYYEYSPNKYR 279 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/247 (25%), Positives = 121/247 (48%), Gaps = 20/247 (8%) Query: 40 HDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGF 99 H + +L + +G T + + Y DI+ + +G L++ A++ + P C Sbjct: 28 HPDVNKLYLILEGEGSVTCNKTEYYPEVGDIMFVPKGSLNSYATNKDKPYKKYWC----- 82 Query: 100 QFQGAEENQLLQPH-SCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLA 158 F + + + S P++ K++ LF +L V +SKN + A A L Sbjct: 83 HFDADILSTDIAVYLSFPLLVKNANKKISYKLFAKL-VKYHESKNPIDAIY--AKALLLR 139 Query: 159 ILYYENFKNAYRSEQGYIK-KDV----LIKDILFYLNNNYREKITLEQLSKKFRASVSYI 213 I+++ Y SE ++K DV ++ ++ Y++ N KITL +L+K + +Y+ Sbjct: 140 IIHF------YFSECEFVKINDVPNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYL 193 Query: 214 CHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGC 273 C F+ + +PI Y+ +++ +AK L T + EIS +G+ + +F+ +F + +G Sbjct: 194 CTLFSSTFGQTPIEYITNKKIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGY 253 Query: 274 SPSDYRR 280 SPS +R+ Sbjct: 254 SPSQFRQ 260 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 18/245 (7%) Query: 45 ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA 104 +LIY+ G RF + + +VV G+ + D +Y F G Sbjct: 68 QLIYITGGKGRFRFHNETIEVPSGSLVVYTPGQPQHYSYQAED-----GTEVYWIHFTGY 122 Query: 105 EENQLLQPHSC---PVIAAGQGKEV---IKTLFNELSVILPQSKNSQTSSLWDAFAYTLA 158 LQ PV G +V K + EL+ S S + +A+ + Sbjct: 123 SAYDYLQQFGLLTQPVHTVGIIDDVTALFKKIIQELN-----SHRPLGSHMVNAYLLEML 177 Query: 159 ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 L + A E G + I ++ +++ Y E +++ L+ + SV H+F Sbjct: 178 TLLGRRLQTA--EEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFK 235 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + ++P+ Y+ + R+ EAK L+ + L E++ VGY+N +F+++F VG PS+Y Sbjct: 236 EVTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEY 295 Query: 279 RRQFK 283 ++QF+ Sbjct: 296 KKQFQ 300 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 12/254 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+ E E+ +K G + ID + D+++I LH+ + + + Sbjct: 11 HWHE-EMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVSDSLVFH 69 Query: 98 ----GFQFQGAEENQLLQP------HSCPVIAAGQ-GKEVIKTLFNELSVILPQSKNSQT 146 G+Q A + L P PV+ G G E +K F L + Sbjct: 70 LDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNGKQYGYE 129 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + +LY + G + +K++L Y+ +NYRE +T+E+LS Sbjct: 130 LYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLTIEELSSVC 189 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S ++ + F + ++ + Y+ R+T A L TE +I+ G+ N+ +F K+ Sbjct: 190 HFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNISYFNKV 249 Query: 267 FLRHVGCSPSDYRR 280 F G +P YR+ Sbjct: 250 FKERFGVTPGSYRK 263 >UniRef50_A6LXV6 Xylan 1,4-beta-xylosidase n=2 Tax=Clostridium RepID=A6LXV6_CLOB8 Length = 841 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 17/245 (6%) Query: 45 ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ-- 102 ELIY+ G R + Y H DD+++I +H++ C + + Sbjct: 35 ELIYILTGSVRVQCRNMQYTLHEDDLILINMFDVHSLYGK--------KCEVLSLKIDIS 86 Query: 103 --GAEENQLLQPH-SCPVIAAGQGKEVIKTLFNELSVILPQSKN--SQTSSLWDAFAYTL 157 E ++ Q C K+ I+ L L++I+ + N L ++ Y L Sbjct: 87 ALDPEISRFAQNRFDCNSSIEADKKKFIR-LKRLLALIVKSNVNPDENVELLNKSYIYEL 145 Query: 158 AILYYENFKNAYRSEQGYIKKDV-LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 + FK + I K+ IK+IL Y++ NYR KI+L LS +F S+ YI Sbjct: 146 LYILTSTFKVEDSANSTDINKNSERIKNILHYISENYRNKISLNSLSDEFYLSMPYISKI 205 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 F IS +Y+I+ R++ A LT+ L+ I+ + G+ N F F C PS Sbjct: 206 FKDFIGISFSDYLIEIRLSHAMKDLTDPNLTIEYIAEKNGFSNTRSFVSSFKSKYFCLPS 265 Query: 277 DYRRQ 281 YR+ Sbjct: 266 SYRKN 270 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 29/265 (10%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 +E +H H E+ Y+ G + I LY A D+++I + +H + DP Sbjct: 30 FERNNHYHGT-YEIYYLVSGERHYFIKEKLYSIRAGDLILINKFDVHKTSGH-GDPEHER 87 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAG------QGKEVIKTLFNELSVILPQSKNSQT 146 + F G P++A+G Q + +++ E ++I+ Q N Sbjct: 88 IVINFSDSFLGK---------GHPLLASGLLGMFNQDRPLLRLTVPEQAIIM-QILNKMA 137 Query: 147 SSLWD---AFAYTLAILYYENFKNAYR-----SEQGYIKKDVL---IKDILFYLNNNYRE 195 + + ++ + L +L E YR S + + L I D++ +++ +Y + Sbjct: 138 DEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDVVKFIHVHYAD 197 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 KITL+ LS+ F S Y+ F + + INY+ R+ EA+ LT+T+L +I+ + Sbjct: 198 KITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTDLKIVDIAESI 257 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRR 280 G+E++ HF + F + + + S YR+ Sbjct: 258 GFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_Q1N1F9 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=2 Tax=Gammaproteobacteria RepID=Q1N1F9_9GAMM Length = 340 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 60/105 (57%) Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 +D LI+ I YL+ Y + +TL+ L+K F S + F + ++P +Y+ RM A Sbjct: 232 QDSLIQSIQDYLDAAYHKPVTLDDLAKTFNISQRTLIRRFKQALDMTPHSYIQNLRMEVA 291 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + +L TE + + +VGYE+V F +LF +H G +P+ YR +F Sbjct: 292 QKALAETERTVETVMQQVGYEDVSAFRRLFKQHTGLTPNAYRDRF 336 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 13/252 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E + + + KG+A F I+ H D + I G LH +A + T C Sbjct: 41 HWHD-EIQFVLILKGIALFQINEEKIEVHEGDGLFINSGYLH-MAEEKEGSDCTYICLNV 98 Query: 98 GFQFQGAEE--NQLLQPH----SCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 F ++E + +QP+ + P + ++ K + + + I Q +SL++ Sbjct: 99 SPHFVLSQELYSSYVQPYMFSTNLPYLFLAGNQQWAKNILDAVKKI--NQLIQQKTSLYE 156 Query: 152 A-FAYTLAILYYENFKNAYRSE--QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRA 208 L +++ N ++ E Q + K +K +L +++ +Y EKITLE ++K + Sbjct: 157 IDITMQLTLMWKNLVVNGFQLEYDQSEMIKSHRMKQMLNWIHLHYVEKITLEDIAKAGQL 216 Query: 209 SVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFL 268 S S C F + +P+ YV+ R+ ++ L + E + E+S++VG+ + +F F Sbjct: 217 SRSECCRYFKRMLNKTPLRYVMDYRIQKSLLLLQHPESNVTEVSYQVGFNSTSYFISKFQ 276 Query: 269 RHVGCSPSDYRR 280 + + +P Y++ Sbjct: 277 QAMNMTPLSYKK 288 >UniRef50_A7VR07 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VR07_9CLOT Length = 515 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 62/108 (57%) Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 G ++K L+ I Y++ NY+ ITL+ ++ + S +Y+ F + I+ + + R Sbjct: 407 GRLEKHDLVDQISRYISANYQSNITLQDIADQIHISSAYVSRLFRNKTGITITEAINRAR 466 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 + +AK L N E EI+ VG+E+ +F +F ++VGCSPS+YR Q Sbjct: 467 IDQAKLLLGNPEYKVYEIAQMVGFEDAAYFTSVFTKYVGCSPSEYRSQ 514 >UniRef50_C0C1J0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C1J0_9CLOT Length = 544 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 62/101 (61%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LI DIL Y++ +Y + ++L ++ KF + SY+ F KE + I+Y+ R+ +A Sbjct: 435 LITDILAYVDEHYSKDVSLGTIAGKFFINPSYLSQLFKKEMNMKFIDYITDVRIKKALVL 494 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 L T L+ E++ VGY++ +F ++F++H+G +PS YR + Sbjct: 495 LETTSLTVNEVAEAVGYKDTRYFREIFVKHMGKTPSQYRME 535 >UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8 Length = 297 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 11/244 (4%) Query: 42 NETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQF 101 E LIY KG + +D YV + ++ + H S +DP +Y F Sbjct: 56 GEYLLIYCTKGEGWYVLDGKRYVVPENHFFILPAEKPHQYGSSEHDP-----WYIYWAHF 110 Query: 102 QGAEENQLL-QPHSCPVIAAGQGKEVIKTL--FNELSVILPQSKNSQTSSLWD-AFAYTL 157 +G + + Q I + + F+EL +L + T + + +F + + Sbjct: 111 KGKKAKYISDQLQGVIPIDMDDNSRIGDRIAFFDELLNVLESGTDEATVNYVNLSFNHLI 170 Query: 158 A-ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 A LY + ++ A + + + I ++ N K+TL++L+ F S SY+ Sbjct: 171 ASFLYVKTYREA-KFSKSKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRL 229 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 F KE +P+NY + ++ A L +T + +++ ++G+++ +F+++F + VG SP Sbjct: 230 FFKETGYAPMNYFLHMKIDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSPK 289 Query: 277 DYRR 280 DYR Sbjct: 290 DYRH 293 >UniRef50_C6JBV9 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBV9_9FIRM Length = 527 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 62/105 (59%) Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 +KD ++ +L Y++ +Y E I+ L+ + Y+ F K+ + S INY+ R+ + Sbjct: 423 EKDSVVDIVLNYIHQHYSEDISRTMLADMVYLNPDYLARLFKKQTQTSIINYITTYRLEK 482 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 AK L N ++ ++ +VGY N +F+KLF VGC+P++YR++ Sbjct: 483 AKELLLNPDIPVGTVALKVGYGNYSYFSKLFKDVVGCTPNEYRKK 527 >UniRef50_UPI0001788C4E two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C4E Length = 538 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 72/112 (64%) Query: 173 QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR 232 Q + K + +I DI YL +Y ++I+L+Q++ KF S YI +F +E+ ++ +++ + Sbjct: 427 QIHSKDNHIIHDIAQYLEQHYHDEISLQQIAGKFFLSREYISRKFKQEFGVTLSDFLGRI 486 Query: 233 RMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 R+ +AK L N ++ A+I+ VGY++ +F+K+F + G +P++YR++ N Sbjct: 487 RIEKAKTLLLNPQIRIAQIAEMVGYQDEKYFSKVFKKMEGFTPNEYRKKHMN 538 >UniRef50_C9BRE3 AraC family DNA-binding response regulator n=5 Tax=Enterococcus faecium RepID=C9BRE3_ENTFC Length = 242 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 62/101 (61%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I+ ++ Y+ NNY EK+TL+ ++ +F +Y+ F KE S +Y++ R+ A L Sbjct: 141 IQQVIDYVQNNYSEKLTLKDVATQFHYHPAYLGRAFKKETGYSFHDYLLDFRIKRASALL 200 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +T LS EIS +VG ++V +F+ LF + G SPS+YR++ Sbjct: 201 KDTFLSIDEISQKVGIDHVSYFSVLFKKTTGHSPSNYRKKL 241 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 55/92 (59%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ N+ E+ITLEQ++ +Y F + + I+P Y+ +RM +AK L T LS Sbjct: 181 YIKNHLHEEITLEQMAGTLHLHPNYFIKYFKRHFGITPQKYLSLKRMEQAKLMLRTTSLS 240 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 EI+ G+E+ ++F+K F + VG SPS+YR Sbjct: 241 IKEIADATGFESANYFSKTFRKEVGYSPSEYR 272 >UniRef50_D1VU21 Transcriptional regulator, AraC family n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VU21_9FIRM Length = 307 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 2/128 (1%) Query: 156 TLAILYYENFKNAYRSEQGYIKKDVL--IKDILFYLNNNYREKITLEQLSKKFRASVSYI 213 TL ++Y + K + + Y KKD+ I I YL N EKI L+ LSK F+ S + + Sbjct: 178 TLELIYLISKKKLSDNRKKYYKKDLQDDINKIEEYLRLNISEKIDLDFLSKNFKISKTNL 237 Query: 214 CHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGC 273 ++F ++++ +P+ Y+ RM EA+ L + E +IS VG+ N +F++ F + G Sbjct: 238 NNKFIRKFQYTPMKYLNNLRMIEAEKLLVDLEKEITDISQDVGFSNPSNFSRSFKKFTGL 297 Query: 274 SPSDYRRQ 281 SPS+YR+ Sbjct: 298 SPSEYRKN 305 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 62/99 (62%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I+ I+ Y+ N+Y E ITL+ L+K S +Y+ + F K+ I+ Y+I R+ ++K + Sbjct: 179 IEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRLKKSKELI 238 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 T+LS EIS VG E+ ++F++LF + G SP +Y++ Sbjct: 239 ETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKK 277 >UniRef50_C6LAG9 L-rhamnose operon transcriptional activator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LAG9_9FIRM Length = 179 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 58/94 (61%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++N+++E ITL+ L+ S Y+ H F Y SPI+Y++ R+ E+ + LT T+L+ Sbjct: 70 YIDNHFKENITLDDLAAVAHVSKYYLAHLFRHAYDTSPISYLLSCRIQESLYLLTETDLT 129 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +EIS +G+ + +F++ F R G SP YR Q Sbjct: 130 LSEISQMLGFSSPSYFSQSFRRIQGISPMQYRMQ 163 >UniRef50_D0LKF1 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LKF1_HALO1 Length = 162 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 7/123 (5%) Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D+ + + +++ + I LE ++ S + F + Y ++P Y+ QRR+ AK Sbjct: 33 DLRLARVRAFIDEHSDAAIDLEAMAAHAGLSRYHFLRAFRRAYDVTPHQYLTQRRIERAK 92 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQP 298 L ++L E+ + VG+ ++ F+ LF RHVG +P YRR+ C E P P Sbjct: 93 ELLMGSDLPVTEVCFEVGFHSLGSFSTLFTRHVGHAPGRYRRRMLAC-------PELPPP 145 Query: 299 VSL 301 V++ Sbjct: 146 VAI 148 >UniRef50_C0A4H9 AraC-type DNA-binding domain-containing protein-like protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A4H9_9BACT Length = 307 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 7/194 (3%) Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSC-PVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 P + + G F G P C PV++ K + + L ++ ++ + + S Sbjct: 112 PGSGSPIKMLGLDFAGLLSAWTNLP--CEPVLSRRLPKALARVLAGKIEALVNRGRASPQ 169 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + A IL F+N +R E K ++DI+ YRE++ L L+K Sbjct: 170 PDDLELGALLAEILTVV-FRNVFRKEAAAPDKIDQVRDII---RTRYREELHLTTLAKDA 225 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S S++ F + SPI+Y ++ R+ A L S AEI+ VG+E+V +F++L Sbjct: 226 GLSPSHLSRRFKARFGRSPISYQLELRLQSACELLRTRGESLAEIAAAVGFEDVFYFSRL 285 Query: 267 FLRHVGCSPSDYRR 280 F R +G +P +R+ Sbjct: 286 FRRRLGEAPGSFRK 299 >UniRef50_B1MWN3 AraC-type DNA-binding domain-containing protein n=1 Tax=Leuconostoc citreum KM20 RepID=B1MWN3_LEUCK Length = 290 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 SD + + H H+ + V + +FT+D Y D++VI G +H+V + Sbjct: 34 SDRLQQDVPKHWHEELELSLTVNGHIDQFTVDGRPYHTKTGDVLVINSGSVHSVP--IQK 91 Query: 88 PATTCTCALYGFQFQGAEENQ----LLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 P T + F A Q + H V +A + E++ L+ + N Sbjct: 92 PGTEAFTLFFNPDFLRAALPQASEIVFATHPNDV-SAVESTELVDYLYAMHYTVRHDPMN 150 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK--DVLIKDILFYLNNNYREKITLEQ 201 + AY + +F N ++ + D + ILFY+ + +T+ Sbjct: 151 YLRIT---RLAYDILDELVMHFSNREFGINPHLIQTVDERLYKILFYIKAHIYNGLTVAA 207 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 +++ F S SY+ F + ++SP+ Y+ R+ +A L NT S + IS G+ +V Sbjct: 208 VAEHFDISTSYLSRYFKIKLQMSPLAYLQAVRLNKAYQYLMNTNKSMSWISDTTGFGDVK 267 Query: 262 HFAKLFLRHVGCSPSDYRRQFK 283 F +LF + G SP YR+QF+ Sbjct: 268 SFERLFKKKYGTSPKSYRQQFR 289 >UniRef50_Q4LAE2 Lactose operon transcription activator n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Q4LAE2_STAHJ Length = 161 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 4/161 (2%) Query: 126 VIKTLFNELSVILPQSKNSQTSS--LWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIK 183 +I F +L L QS S S+ L + Y L E F + + + +D I+ Sbjct: 2 IILCWFIQLICELSQSIESNNSNDILIMQYLYQLVYTLQEKFPKNFSVQVDIVNED--IQ 59 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 + ++N NY++ IT+E+++K + S++ F K SP Y+ RM A L + Sbjct: 60 HAVDFINTNYQKHITVEEVAKTVNITRSHLYKLFKKNLSCSPKEYLTYIRMYHASQLLIH 119 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 T +EIS RVGY++ F+K F +H S S+YRRQF N Sbjct: 120 TNTHISEISRRVGYKDPLLFSKNFTKHFEISASEYRRQFAN 160 >UniRef50_C2HBK3 AraC family response regulator n=19 Tax=Enterococcus faecium RepID=C2HBK3_ENTFC Length = 502 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 6/151 (3%) Query: 133 ELSVILPQSKNSQTSSLWDA-FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILF-YLN 190 ELS++ K + S L DA + +IL E + IK + I +++ ++ Sbjct: 352 ELSLL----KIALPSLLADAEYLEDFSILVKETLEKLTHFSANAIKDNFDILTLIYEFVQ 407 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 NY ++I L+ LS+K+ S SY+ FT+++ I+ Y+ + R+++AK LT T L+ E Sbjct: 408 ENYEKEINLQLLSEKYHFSYSYLSAIFTEKFGINFSKYLKKVRISKAKLFLTETRLTLTE 467 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 I +VGY + +F+++F G +PS YR++ Sbjct: 468 ICEKVGYTELGYFSRVFKEETGMTPSQYRKE 498 >UniRef50_O33813 Lactose operon transcription activator n=4 Tax=Staphylococcus RepID=LACR_STAXY Length = 279 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 18/241 (7%) Query: 49 VKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQ 108 V +G F+ Y A DI ++ERG ++P T + + G Q Sbjct: 44 VTQGEGTFSYAGETYHLTAGDIFLLERGMEVEYKPSFSNPWT--------YYWVGMNGKQ 95 Query: 109 LLQPHS-CPVIAA----GQGKEVIKTLFNELSVILPQSKNSQTSS--LWDAFAYTLAILY 161 +L S C ++ + GQ IK + +L L QS S S+ L + Y L Sbjct: 96 ILNYLSRCSIVDSHVILGQDTTDIKNII-QLICKLSQSIESNNSNDILIMQYLYQLVYTL 154 Query: 162 YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEY 221 E F + + + +D I+ + ++N NY++ IT+E ++K + S++ F K Sbjct: 155 QEKFPKIFSVQVDIVNED--IQHAVDFINTNYQKHITVEDVAKSVNITRSHLYKLFKKNL 212 Query: 222 RISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 SP Y+ RM A L +T ++IS +VGY++ F+K F +H S S+YR Sbjct: 213 GCSPKEYLTYIRMYHASQLLIHTSTLISDISRQVGYKDPLLFSKNFTKHFEISASEYRHH 272 Query: 282 F 282 F Sbjct: 273 F 273 >UniRef50_C6JC58 Two component transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC58_9FIRM Length = 547 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 2/112 (1%) Query: 171 SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 S+ G I + V + I Y+ +Y E ITL L++++ SY+ F+++Y + I ++ Sbjct: 435 SDAGSIMQQV--EQIHKYIERSYHENITLTALAEQYHMDASYLSRTFSQKYGETIIAFLT 492 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + RM +A + N + IS+ VGY++ ++F+++F + VGCSP +YR +F Sbjct: 493 RIRMEKAAELMKNQDKKLETISFLVGYDDYNYFSRVFRKKVGCSPREYRNKF 544 >UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSG8_9BACE Length = 281 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 63/101 (62%), Gaps = 1/101 (0%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++ Y + ITL L++ Y+ H FTK Y +SP+NY+I++R+ AK L N++ + Sbjct: 182 YIDYYYSDNITLALLARIAGWDRFYLSHAFTKAYGLSPMNYLIKKRLDCAKELLKNSDHT 241 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 AEIS +G+ + ++F + F R VG + ++YR+ + C +E Sbjct: 242 IAEISQMLGFSSQNYFTQTFKRKVGITATEYRKS-QTCGSE 281 >UniRef50_A1HM14 Two component transcriptional regulator, AraC family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HM14_9FIRM Length = 247 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 58/100 (58%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I+ +L Y+ I L +++ + SY+ F +E ++ ++YV +M EAK L Sbjct: 141 IQQVLRYMAETPLGDINLTDAARRVHMNPSYLSQLFKQEMQVCFVDYVTDLKMKEAKRLL 200 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 T L +EI+ R+GY ++ +F+ +F +H CSPS+YR+Q Sbjct: 201 ATTTLRISEIADRLGYADLAYFSNIFKKHTACSPSEYRKQ 240 >UniRef50_C6VNM4 Transcription regulator n=3 Tax=Lactobacillus plantarum RepID=C6VNM4_LACPJ Length = 341 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/277 (22%), Positives = 116/277 (41%), Gaps = 40/277 (14%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + EL+++ +G +D + + HA+D+++I R HA A T C Sbjct: 32 QIELLWLLQGTVEVNVDGTRHQLHANDLILINANRGHATF------ALTPECIA------ 79 Query: 103 GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQT-----SSLW------- 150 L+ H P QG ++ F SV PQ ++ QT + L+ Sbjct: 80 -------LRLHILPDFYTNQGIDLSSGAFLLNSVTTPQHRDYQTIRQILAQLYLGLHQQD 132 Query: 151 ------DAFAYTLA-ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 +A + L +L+++ F K + ++ Y+N Y ITL + + Sbjct: 133 WPIFDLNALYFQLTNLLHHDFFDTGITMTYPQPKTQSSLNRVIDYINQAYDRPITLNEAA 192 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 K S +Y+ F E ++ Y+ + R+ A + L N A+++ G++ V F Sbjct: 193 KISHYSPAYLSRIFKAELGLNFYEYLTRCRLQHAIYDLENPTTRVADLALANGFQEVKSF 252 Query: 264 AKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS 300 +F +H G +PS YR+ + ++ +F QP++ Sbjct: 253 NLMFKKHFGQTPSSYRQHLSH--GQRPEYGQFKQPLT 287 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/255 (18%), Positives = 111/255 (43%), Gaps = 13/255 (5%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 E E+ + +G + ++ +LY D + + LH+ N+ Sbjct: 46 ELEIACILEGTMTYQVNQNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIY 105 Query: 103 GAEENQLLQPHSCPVIA-----------AGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 G E++ + ++ P++ G E + + E++ + + Sbjct: 106 GYEKSDIDTNYTFPLLNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKS 165 Query: 152 AFAYTLAILYYENFKNAYRSEQGYI--KKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 A+L+ E ++ S G K+ +K+ + +++++Y + ITL+Q+++ S Sbjct: 166 RLCELWALLFEEFQRSQLPSGAGLAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTS 225 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 S C F K +P Y+++ R+ ++ L S EI+ +VG+ +++++F + Sbjct: 226 KSEFCRIFKKTLHQTPFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRK 285 Query: 270 HVGCSPSDYRRQFKN 284 ++GCSP +Y++ N Sbjct: 286 YMGCSPREYKKNLMN 300 >UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXH3_9FIRM Length = 298 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 61/107 (57%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++N++ + I LEQL ++ S ++ H+F +E +SPINY+ Q R+T+A+ L T + Sbjct: 180 YIDNHFSKNINLEQLEERAHVSRFHLAHQFKEELGLSPINYLNQVRLTQAQELLLTTNYT 239 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSE 294 +I+ VG+ +V +F+ F VG +P YR + + L E Sbjct: 240 VLQITEMVGFNSVSYFSNKFHEAVGMTPRAYRNLHASSLIQTRSLKE 286 >UniRef50_B0K3C5 Response regulator receiver protein n=4 Tax=Thermoanaerobacter RepID=B0K3C5_THEPX Length = 530 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 82/144 (56%), Gaps = 11/144 (7%) Query: 138 LPQSKNSQTSSLW-DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREK 196 L +++N + +LW +F ++ L F A R+E +++ ++ Y+N N+ ++ Sbjct: 392 LMRTQNYRGITLWATSFLEEISDL----FAGAKRNENNIVER------VVKYINENFEKE 441 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 I L++LS+ + Y F KE + Y+ + R+ AK L N L+ +EI+ +VG Sbjct: 442 IRLKELSQTIYLNPEYFSRLFKKEVGCTYAEYLTRIRIEAAKKYLANPSLTISEIARKVG 501 Query: 257 YENVDHFAKLFLRHVGCSPSDYRR 280 Y++ ++F+K+F + VG SPS++R+ Sbjct: 502 YQDANYFSKVFKKVVGISPSEFRK 525 >UniRef50_UPI00019047EB transcriptional regulator n=1 Tax=Rhizobium etli Kim 5 RepID=UPI00019047EB Length = 388 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 8/192 (4%) Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKT----LFNELSVILPQSKNSQTSSLWDA 152 Y F+ A + P ++ AGQ E+I + +++L + L T++ Sbjct: 186 YSKTFRDAYPEVTIHPEQV-LVVAGQRDELITSGASMTWHDLVLYLIARHAGATAA--QT 242 Query: 153 FAYTLAILYYENFKNAYRSEQGYIK-KDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 A A+ ++++ Y +G D I+ +L ++ LE++ ++ + Sbjct: 243 VARYFALQWHQDGLAPYMVFEGRRDHGDQAIQTAQDWLTAHFSVANPLEEMVRQAGLTER 302 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 FT+ +SPI YV + R+ EAK L TE S EISW+VGYE F +LF R Sbjct: 303 TFKRRFTRATGMSPIAYVQRLRIEEAKRRLERTEASVDEISWQVGYEEPAFFRRLFRRIT 362 Query: 272 GCSPSDYRRQFK 283 G +P +YRR+F+ Sbjct: 363 GLAPGNYRRRFQ 374 >UniRef50_C6D490 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D490_PAESJ Length = 527 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 63/118 (53%) Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 ++ E KK +I ++ Y+ +Y E ITL LS +F S Y+ F ++ + +N Sbjct: 410 VFKQEHNIPKKKDIIAEVKEYVAEHYSEPITLADLSARFFISPYYLSQFFKQKTGDTYVN 469 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 ++ + R+ +AK L T+L E+ VGY + HFA++F + G P DYR++ N Sbjct: 470 FLTRIRINKAKELLERTDLKVYEVCQMVGYSDTQHFARMFEKLTGYKPRDYRKRLPNA 527 >UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DIQ4_CLOTH Length = 204 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 67/109 (61%) Query: 170 RSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYV 229 ++E+ I + I++I+ Y++ ++ +KIT+E+L+KK S S+ F K +SP++Y+ Sbjct: 89 KTEKNLISDNFEIENIIEYMHQHFGQKITVEELAKKTNMSKSHFIRVFKKITGLSPMDYL 148 Query: 230 IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 I R+ +AK L + +EIS+ G+ ++ HF+ F + VG SPS Y Sbjct: 149 INIRIEKAKKLLGAGTKNISEISFLCGFNSLSHFSSTFSKIVGVSPSKY 197 >UniRef50_A1SBN9 Transcriptional regulator, AraC family with amidase-like domain n=1 Tax=Shewanella amazonensis SB2B RepID=A1SBN9_SHEAM Length = 342 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 57/108 (52%) Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 + D + DI+ +++NN E + LE L+++F + F +P +Y+ + R+ Sbjct: 227 LHTDPQVADIMRWISNNLTEDLALESLAERFAMGKRTLIRRFKAALHDTPSSYIQKLRID 286 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 AK L T+L I +GYE+V F KLF++H +P YR +F+ Sbjct: 287 RAKRLLERTDLPLERILPELGYEDVSSFRKLFIQHTSLTPKAYREKFR 334 >UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3B3_GEOSF Length = 292 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 57/107 (53%) Query: 171 SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 S +I + I ++ YL+ Y EK+T+++++ S S+ F KE +SP+NY+I Sbjct: 178 SSAPHISNRIEINRVVEYLHRRYGEKVTVDKMATVAAMSPSHFSRVFRKETGLSPMNYLI 237 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 R+ +A+ L + E ++ R G+ + HF F + GC PSD Sbjct: 238 DLRLAKARRLLVSGETCVTSVALRCGFASHSHFTDTFRKRFGCPPSD 284 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 21/260 (8%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC--- 94 H H+ E + V G + +D LY + + I R LH + ++++D + Sbjct: 49 HWHE-ELQFTVVTSGKLKLRVDGKLYTLDEGNGIFINRNLLH-ITTEISDGGRYLSFNFP 106 Query: 95 --ALYGFQFQGAEENQLLQPHSCPVIAAGQ-------GKEVIKTLFNELSVILPQSKNSQ 145 + F EEN +L IA + KE++ TL ++ ++ + + + Sbjct: 107 DKVVSFFSGSTMEENFVLPYVGNYGIAVVEFKRTTSWQKEILDTLL-KMELLFKRRREKR 165 Query: 146 TSSLWDAFAYTLAI--LYYENFKNAYRSEQ----GYIKKDVLIKDILFYLNNNYREKITL 199 + + + + I ++Y N +S + YI+K I+ +L Y++N Y + L Sbjct: 166 QAVGREEYQIAIKIVEIWYMMICNIEKSGKKISNSYIRKQERIQAMLSYIHNQYMHPMCL 225 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 +++ SV C F + SP Y+ + R+ +K L TELS E+S VG+ + Sbjct: 226 ADIAQAGNVSVGECCRGFKEVVCKSPNEYLAEYRILRSKELLRGTELSVTEVSGAVGFNS 285 Query: 260 VDHFAKLFLRHVGCSPSDYR 279 V HF + F + G +P Y+ Sbjct: 286 VSHFIQCFKKMTGVTPKAYK 305 >UniRef50_A5ZMK6 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZMK6_9FIRM Length = 529 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 57/95 (60%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++N+Y+E+ITLE++S + +Y F KE I Y+I R+ AK L + LS Sbjct: 434 YIHNHYQEQITLEEVSDYVGLTPAYFSVMFKKETEIGFAKYLINERIEGAKDLLRESTLS 493 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 A+I +VGY + HF +LF ++VG P+ YR+ + Sbjct: 494 VADICRKVGYNDPKHFTRLFEKNVGVKPAVYRKLY 528 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 13/247 (5%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 E E +YV+ G I + + + I LH + C +F Sbjct: 51 EFEFLYVESGEVTCGIGEKQIILSEGEAIFINSKILHRFYAPSGGIIPNFVCMP---EFI 107 Query: 103 GAEENQLLQPHSCPVIAAG------QGKEVIKT-LFNELSVILPQSKNSQTSSLWD-AFA 154 E + + + + P+I++ Q E+ +T + + I+ N + L A Sbjct: 108 APENSLIYKKYILPIISSNIYFQRFQTDELWQTKIIQTMIKIMEIQGNEKIRELATLALM 167 Query: 155 YTLAILYYENFKNAYRSEQGYIKK--DVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 L + +YEN K + + + + + ++ I+ Y++ NY ++L++++ S S Sbjct: 168 QDLWLTFYENVKLSDKGDVQTVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHIGISKST 227 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + F + +P+NY+I R+ A W L NT I++ G+ NVD+F +LF + Sbjct: 228 ALNLFHRFLHTTPVNYLIGYRLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRYH 287 Query: 273 CSPSDYR 279 +PS+YR Sbjct: 288 LTPSEYR 294 >UniRef50_B4WTL9 Transcriptional regulator, AraC family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTL9_9SYNE Length = 282 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 11/218 (5%) Query: 70 IVVIERGRLHAVAS--DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE-V 126 + +I G +HA + +++PA ++ L P S P +A + + Sbjct: 67 LSIIHSGEVHAPSDRPALDEPAHFAMAHIHPKWLNSVAAEVLDNPKSDPFFSAVLPPDAL 126 Query: 127 IKTLFNELSVILPQ--SKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 + LF ELS I Q S+ Q +LWD +Y ++ Y K S + + +L +D Sbjct: 127 LNHLFLELSTITLQKSSQLEQDVALWDFLSYLIS--RYALDKPTTSSSKPSRQAVLLARD 184 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 YL +Y + ++L+ L+ S + C F KE +S Y Q R+ EA+ L Sbjct: 185 ---YLRAHYSDDVSLDNLAAVAGLSRFHFCRLFRKEIGVSASTYQTQLRLAEARRLLAQG 241 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L +E + G+ + HF K F RHVG +P+ Y Q Sbjct: 242 TLI-SETAIATGFYDQSHFGKHFKRHVGTTPAKYTSQI 278 >UniRef50_C6CUN1 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CUN1_PAESJ Length = 291 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 24/266 (9%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H EL+Y+ +G T++S Y + + + +LH V + + AT L Sbjct: 32 HAHQG-IELLYIHEGSGTVTLESQQYKLEDNMLFCFQPYQLHKVDVPLKEGATYIRTNL- 89 Query: 98 GFQFQGAEENQLLQPHSCPVIAA-------GQGKEVI------KTLFNELS-VILPQSKN 143 F + LQP+ P + A G + + KTL N LS ++ Sbjct: 90 --TFDARILDPYLQPY--PKMQAFLRRLMYGLLRRQVFTFCEDKTLANLLSDYDKMRTLT 145 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV---LIKDILFYLNNNYREKITLE 200 S+ D + L+++ + + + S + D ++ IL ++ +YR+ I+LE Sbjct: 146 GGEPSVEDRVLFLLSLIKHLQL-HVFESGDTHASMDKNSGHVEKILDWIETHYRQTISLE 204 Query: 201 QLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENV 260 LS++ S +I H F ++ ++ +YV RR+ EA L NT+ S EI +G + Sbjct: 205 SLSRELHLSSYHISHLFKQQTGMTISDYVAGRRIREACALLENTDYSINEIGRMIGGFSA 264 Query: 261 DHFAKLFLRHVGCSPSDYRRQFKNCF 286 +F++LF RH G +P YR K+ + Sbjct: 265 PYFSQLFKRHKGVTPHLYRSAIKHTY 290 >UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG90_9FIRM Length = 298 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 16/269 (5%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P++E+ + +L+Y+ G+A F + A V+ D Sbjct: 36 PRFETTRPTGRPDYQLLYIASGIAHFQKGETYVPLPAGSAVLYHPNHTQFYYYSAED--- 92 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCP---VIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 + +Y F G +Q L P G I + FN + + Q K Sbjct: 93 --SSEVYWIHFTGNRVSQYLSDWGVPDNDFYNVGINSRYI-SFFNHI-IHEQQLKKENYM 148 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 L + + IL K A ++ +I + YL+ +Y E I++ L+K+ Sbjct: 149 ELCKYYLIQILILMNRGMKEASAPYNNHVS---IINKTVTYLHEHYNEPISIIDLAKENH 205 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + ++ H F + Y +SP Y++ R+ +AK LTN LS ++++ GY + +F+++F Sbjct: 206 LTPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISDVALLTGYSDAFYFSRIF 265 Query: 268 LRHVGCSPSDYRRQFKNCFAEQEILSEFP 296 R G SP YR KNC +E S P Sbjct: 266 KRKTGLSPQQYR---KNCMVFEEEHSYSP 291 >UniRef50_B7CDP9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDP9_9FIRM Length = 389 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 27/247 (10%) Query: 45 ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGF----Q 100 EL Y+ G T+D Y D+++ G+ H ++D +TC+ F + Sbjct: 155 ELTYIDHGTLDTTVDGQKYRLQKYDLILYYPGQFHTQSTD---DQSTCSYLTITFDMDNK 211 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 G +N++ H K++ + L + I QS S + + + IL Sbjct: 212 LPGDLKNRVFHTH----------KDIYQVLSEFMKFI--QSDGHLNSEMVLLYLKQILIL 259 Query: 161 YYENFKNAYRSEQGYIK-------KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYI 213 Y+ F + + +Q + L+ +IL ++NNN ++ T+E L KF S S + Sbjct: 260 LYQ-FDDESQEQQSITANPMQEHYESTLLNEILVFINNNVYKQFTVEDLCMKFSISRSSL 318 Query: 214 CHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGC 273 + F I+P Y+ ++ +AK + + +EIS +G+ ++ +F++ F G Sbjct: 319 QNLFKSNIHITPKQYISNVKLNQAKIMIHEHNQTISEISDILGFTSIHYFSRKFKLQYGI 378 Query: 274 SPSDYRR 280 SP+DY + Sbjct: 379 SPTDYAK 385 >UniRef50_B0NXL6 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXL6_9CLOT Length = 282 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 22/244 (9%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG-- 103 IYV +G DS VA +I +I+ + HA D C Y F F G Sbjct: 54 FIYVAEGELHLEHDSQHEVAKKGEIFLIDCSKPHAYYVDKE-------CEFYYFHFAGRA 106 Query: 104 ---AEENQLLQPHSC--PVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLA 158 ++ +L C +I + + ++ + + L P S S + + L Sbjct: 107 AYEITKDLILDNKGCLFHIINSDRIRKQMDLTISPLFYEQPISDVSLSCMAYQC----LC 162 Query: 159 ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 +L N + + +E+ ++ ++ + Y+ + K+TLE+LS++ S Y H F Sbjct: 163 MLQASN--DVFTTEES--DENSMLSSTMTYIREHLGHKLTLEELSRQASLSPYYFAHLFK 218 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 +E ISPI YV ++ AK L TE S EI+ +GY + F F + G SP+ + Sbjct: 219 EETGISPIEYVAMTKINYAKNILKTTENSITEIADLLGYSSDASFINAFKKRAGLSPARF 278 Query: 279 RRQF 282 RR+ Sbjct: 279 RRKL 282 >UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGA4_EUBSP Length = 295 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 9/234 (3%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G ++ ++ I + H +D DP + G + Sbjct: 63 LIYCTEGKGTIEVEGEVFEMRKSGAFCIPCKKGHRYYADAKDPWSILWVHFKG---ENTA 119 Query: 106 ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENF 165 + +PH P+ + ++ LFN L +L + + T + + L+++ E + Sbjct: 120 YFPIDEPHVVPMNSRHSDNRMM-VLFNLLFRVL---RRNYTLGNFIYISQVLSLILSEVY 175 Query: 166 KNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISP 225 E + V + ++ ++ N +TLE++S++ + S SY+ F + SP Sbjct: 176 YREKVDESSVQDRHVTM--VIRFMYENLTRSLTLEEISEEVQLSRSYLNTIFKNQTGRSP 233 Query: 226 INYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 + + I +M EA L NT L E+S R+GYE+ +F+++F + VG SP DY+ Sbjct: 234 VEFFIHLKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPKDYK 287 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/120 (35%), Positives = 62/120 (51%) Query: 171 SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 +E +K I I+ YL+ NY ITL +L+++F S Y+C EF K + + Y+ Sbjct: 147 TETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREFKKYTNSTIVQYIN 206 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQE 290 R+ A+ T+ S EIS VG+ NV HF +++ G SPS R+Q K A E Sbjct: 207 SLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSKSRKQAKERSAAME 266 >UniRef50_A8MKK7 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MKK7_ALKOO Length = 275 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 2/123 (1%) Query: 160 LYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTK 219 L YE FK+ + +Q + ++++ + Y++ Y E ITL+ L+K++ + F + Sbjct: 151 LLYEIFKSHH--DQAKEEDRWIVEEAMNYIHAYYMEPITLKDLAKRYDLDKNRFSRLFNR 208 Query: 220 EYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 P+NY+I RM A L + S E+S VGY NV +F KLF ++ G PS YR Sbjct: 209 YAGARPMNYLISYRMKRASELLLTSNFSVREVSENVGYTNVSYFTKLFKKYNGQLPSTYR 268 Query: 280 RQF 282 R+F Sbjct: 269 RKF 271 >UniRef50_A1ZXA6 Probable transcriptional regulatory protein, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZXA6_9SPHI Length = 290 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 56/91 (61%) Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 + +YRE + LEQL+ S+S +F + ++ SP ++ RR+ EA++ LT+T+ + Sbjct: 195 MEQHYREPMPLEQLAFLGGYSLSTFKRKFKEVFQQSPSRWIQSRRLQEARFLLTSTQKNI 254 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 E+ + VG+EN+ HF ++F G +P D+R Sbjct: 255 TEVGYEVGFENISHFIQVFKTAFGATPGDFR 285 >UniRef50_A8SR16 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SR16_9FIRM Length = 306 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 53/92 (57%) Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 ++ NY E ++L+ L +R S IC EF+ + SP+ Y+ RR+ AK L T+LS Sbjct: 203 MDKNYAEPLSLDDLEATYRISRYRICREFSFHFGESPMRYLNSRRIDAAKRLLLTTDLSV 262 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 E+ +VG EN +HF LF + G +P +++ Sbjct: 263 HEVGSQVGIENTNHFINLFKKDTGTTPLSFKQ 294 >UniRef50_C6CTP9 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTP9_PAESJ Length = 537 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 64/107 (59%) Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 G K+ +++DI Y+ NY ++TL+ +S++F S YI F +E + +Y+ + R Sbjct: 430 GGNKEHSIMRDIARYMEQNYNREVTLQDISERFYLSREYISRRFKQEMGENVFDYLGRIR 489 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + +AK L N L A+I+ VGY++ +F+K+F + G SP+ YR+ Sbjct: 490 VEKAKLLLQNPNLKIAQIAEMVGYDDDKYFSKVFKKFEGQSPNQYRK 536 >UniRef50_B8DGU9 Transcriptional regulator, AraC family n=2 Tax=Firmicutes RepID=B8DGU9_LISMH Length = 142 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 64/105 (60%) Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 +K +L+ +I+ Y+ ++ E ++L LS+ S +YI F +E SPINY+I+ R+T Sbjct: 36 QKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLTR 95 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 A+ L N +++ + + VGY + +F+KLF ++ G PS+ R+ Sbjct: 96 AEELLKNKDVTVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRK 140 >UniRef50_C6CUJ6 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CUJ6_PAESJ Length = 528 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 4/141 (2%) Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE-KI 197 P + + SSL D F + I N AY S+Q + +++++ +++ +Y + ++ Sbjct: 387 PYQQIKRMSSLEDTFEWLNQIF---NVAIAYYSKQKVSRPLQIVREVKEHIDLHYSDSEL 443 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 ++E +++ F SYI F KE +S Y+ R+ +AK L T + E+S RVGY Sbjct: 444 SVENIARYFHLDSSYIRKVFAKELNVSVAEYITYVRLNQAKQLLETTGIKLQEVSERVGY 503 Query: 258 ENVDHFAKLFLRHVGCSPSDY 278 + +F+K+F +H G PS+Y Sbjct: 504 SDAGYFSKVFKKHCGVLPSEY 524 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 13/253 (5%) Query: 45 ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA 104 E+I +++G A F IDS Y AH D++ + G LH S + FQ Sbjct: 46 EIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVYNSSLFQNW 105 Query: 105 EENQLLQPHSCPVIAAGQGKEVIKTLFNELSV---ILPQSKNSQTSSLWDAFA------- 154 ++ L + P + V T + L + NS+ + A+ Sbjct: 106 MQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPAYQLMVKSQL 165 Query: 155 YTLAILYYENFKNAYRSEQG---YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 + L L F EQ Y+ K ++ Y+ N+ +K T+ +++ +V Sbjct: 166 HMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADAARRMNLNVH 225 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 + C F K + I+YV R+ EA+ L +LS EI+ VG +N ++F K++ ++ Sbjct: 226 HFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFTKMYKKYK 285 Query: 272 GCSPSDYRRQFKN 284 G +PS R+Q + Sbjct: 286 GVAPSQLRKQLTD 298 >UniRef50_B0NF43 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NF43_EUBSP Length = 519 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 5/124 (4%) Query: 161 YYENFKNAYRSEQGYIK-----KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICH 215 YY + S YIK +++LI + Y++ NY IT+ ++S+ S+SY+ Sbjct: 390 YYSIMRTVIESTAEYIKIAASRRNILIYECEKYIDENYERGITVSEISRYIGVSMSYLSR 449 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 F E + INY+ ++++ +AK L T++ EI+ ++G+EN +F+ F ++ G SP Sbjct: 450 IFKDETGNTIINYINEKKIQKAKEYLGGTDMKIYEIAEKLGFENTTYFSYFFKKYTGISP 509 Query: 276 SDYR 279 +Y+ Sbjct: 510 KEYK 513 >UniRef50_Q9K690 Two-component response regulator n=1 Tax=Bacillus halodurans RepID=Q9K690_BACHD Length = 530 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 65/106 (61%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+++++RE +TL+ L+K S Y+ F + + ++ YV Q R+ AK L+ T+ S Sbjct: 423 YVHDHFREPLTLDDLAKHIGLSPYYVSKLFKERFDLTFSEYVTQLRVEHAKQLLSLTQKS 482 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILS 293 EI++ +GY++ ++F+++F + G SPSDYR+ +++ L+ Sbjct: 483 LKEITYEIGYKDPNYFSRVFKKLTGKSPSDYRKSINGLGPKEDTLN 528 >UniRef50_UPI000178A190 two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A190 Length = 540 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/100 (37%), Positives = 60/100 (60%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 ++++I Y+ +Y E++T L++ + Y+ F KE +S Y+IQ R+ AK Sbjct: 427 VVEEIKHYIGCHYGEELTRTTLAEIVFLNPDYLARVFKKETGVSLGTYIIQARIRAAKHL 486 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L +T LS +I+ +VGY N +F+KLF + G +PSDYRR Sbjct: 487 LESTPLSVYQIAAKVGYANYSYFSKLFKQDTGWAPSDYRR 526 >UniRef50_A6C6P4 Probable transcription regulator n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6P4_9PLAN Length = 253 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 61/100 (61%) Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ Y+ +Y+E+I + L+ SVS +F K Y+I+P Y+++ R+ A SLT T Sbjct: 149 VIAYVLEHYQERIQISDLADLMYLSVSQFDRKFKKLYQITPQKYILRVRINAACQSLTRT 208 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 E +EI+ G+ + +F K F+ +G SPS+YR++FK+ Sbjct: 209 EKRVSEIALESGFYDQSYFTKQFVNLMGISPSEYRKKFKS 248 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 113/255 (44%), Gaps = 19/255 (7%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 G V DN L ++ G +FTID D+ ++ +G++ +D P T Sbjct: 45 GPTVRDNYV-LHFIVDGKGKFTIDGITTQLKTGDMFILPKGKVAFYQADGEHPWTYLWVG 103 Query: 96 LYGFQFQGA-EENQLLQPHSC-PVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAF 153 G + + + QLL + C + + +++K L+ Q + T A Sbjct: 104 FSGSKAENILSKTQLLDHYFCHSTLESKVLDQIVK-----LTQFRDQKLDDVTELQLTAE 158 Query: 154 AYTLAILYYENFKNAYRSE-----QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRA 208 Y L + F + S+ Q YIK+ +K I+ + Y + + +++KK Sbjct: 159 LYKLLAFLMKEFPSKAMSDSSILIQNYIKQ---VKKII---HTQYGNPLKISEIAKKLNL 212 Query: 209 SVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFL 268 + SY+ F +E S +Y+IQ RM ++ LT T +EI+ VG+ + F+K F Sbjct: 213 NRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTTFHISEIANAVGFPDALAFSKAFK 272 Query: 269 RHVGCSPSDYRRQFK 283 +H G SPS YR+ K Sbjct: 273 KHFGQSPSHYRKALK 287 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 124/261 (47%), Gaps = 28/261 (10%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC--- 94 H HD E + YV +G F I+ ++ + I G +H++ + VNDP +T C Sbjct: 48 HWHD-EYQFSYVTQGEIYFYINDQTFILKEGQGIFINTGCMHSIKA-VNDPESTYVCINI 105 Query: 95 --ALYGFQFQGAE-ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 L+ F+G+ E + L + I +E N+L I + S D Sbjct: 106 DKKLFS-SFKGSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEID 164 Query: 152 A---FAYTLAILYYENFKNAY--------RSEQGYIKKDVLIKDILFYLNNNYREKITLE 200 TLA++ KNA S+ Y K IK IL +L+ +Y EKITLE Sbjct: 165 ICINLMQTLALV----VKNALNPILLTTIESKDEYQK----IKKILSFLHQHYAEKITLE 216 Query: 201 QLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENV 260 Q+++ + + C F ++ +++ Y+++ R+ ++ L +++ S ++I+ G+ V Sbjct: 217 QIAQHIFLNKNECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAIDTGFSTV 276 Query: 261 DHFAKLFLRHVGCSPSDYRRQ 281 ++ F ++VG +P++YR++ Sbjct: 277 SYYIDTFHKNVGITPNEYRKR 297 >UniRef50_C6JF00 Two component transcriptional regulator n=2 Tax=Ruminococcus RepID=C6JF00_9FIRM Length = 392 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 13/144 (9%) Query: 148 SLWDAFAYTLAILYYENFKN---------AYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 +++ +FA + Y EN KN + +G+ K DV L Y+ NNY ++T Sbjct: 251 TMYQSFAPDMP--YKENLKNYEEARTTYQDFLHSEGHYKNDV--AKTLTYIENNYMHRLT 306 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L +S S SY+C F E S +Y+ R+ +A + S EIS VG + Sbjct: 307 LSSISANVNLSTSYLCRVFKSEVGTSITSYLNNLRIRKAATLIKENTFSLKEISVMVGID 366 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQF 282 + +F++LF + +G SPS+Y ++F Sbjct: 367 DQLYFSRLFKKCMGISPSEYGKRF 390 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 25/266 (9%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P++E H H E E+I + G R ++ + Y+ DD+ I+ G+LH + Sbjct: 29 PQYEMPFHWH-IEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKLHGGS------PK 81 Query: 91 TCTCALYGFQFQGAEENQLLQ-------PHSCPVIAAGQGKEVIKT-LFNELSVILPQSK 142 CT F F + L H I K I + L I + + Sbjct: 82 DCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFDAIRSEEE 141 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRS--EQGYIKKDVLIKDI---LFYLNNNYREKI 197 + S L + A+ KN Y S E+ +K I+ + L + +Y + + Sbjct: 142 GYELSILGSLLLFFAALQ-----KNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAKPL 196 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 TL++LS++ S Y C F + +PI+Y+ R+ +A + ++ +E + +I++R G+ Sbjct: 197 TLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRCGF 256 Query: 258 ENVDHFAKLFLRHVGCSPSDYRRQFK 283 + +F K F ++ G +P Y+ +K Sbjct: 257 NDFSYFIKTFKKYKGITPKKYQMMWK 282 >UniRef50_C0ET05 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0ET05_9FIRM Length = 355 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 60/108 (55%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K ++ Y+ N ++ I+LE ++ S Y+ F KE ++ I YV R+M AK L Sbjct: 244 MKAVIDYIERNLKKGISLEDVANHVNISTYYLSKIFKKEMGVNFITYVTDRKMDLAKEML 303 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQ 289 NT++ I+ + Y ++F+K F + G +PS+YR +++N E+ Sbjct: 304 VNTDIPVLNIALDLAYNEANYFSKAFKKKTGLTPSEYREKYRNRKEEE 351 >UniRef50_UPI0001C35DF5 transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35DF5 Length = 318 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 3/141 (2%) Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 P +N + + F +TL + EN Y SE+ +K I I Y+ +Y E ++ Sbjct: 160 PAVRNMMIHNKFTEFLFTLYQMRKENLYEEYNSERSIKEK---IYTITNYIQTHYYEDLS 216 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L L+ KF S Y+ H+F + + Y+ Q R+ A++ L NT L +I+ ++G+ Sbjct: 217 LAYLADKFFISSFYLSHQFKLVTGFTVVQYIQQTRVKNAQYLLLNTSLKITDIAEKIGFS 276 Query: 259 NVDHFAKLFLRHVGCSPSDYR 279 + F ++F R SPS+Y+ Sbjct: 277 SFSQFNRVFHRFCSMSPSEYK 297 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 15/249 (6%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVA--SDVNDPATTCTC 94 HH HD E E++Y KG ++ + I G LHA+ SD + A Sbjct: 37 HHWHD-EMEILYFSKGSYTLFVNMEQFQIEEKCFYFIYPGELHAIVPHSDSTESALVFHP 95 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKT--LFNELSVILPQSKNSQTSSLWDA 152 +L GF+++ Q L+P S P + + KE K +F++ P+ S + Sbjct: 96 SLLGFEYKLFP--QCLKP-SNPAFSPFE-KEYRKVFHIFHQF----PEDSLSARLFIQSG 147 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 IL F + ++E+ + IK L +L+++Y+EK+ + L+ + + Y Sbjct: 148 IFKMAGIL--STFPSLLQTERKTDMRIETIKTALDFLHSHYQEKLYIRDLALQVNMNEQY 205 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 C F K SPI Y+ + R+ +A L T+L E+ G+ ++ +F K F ++ Sbjct: 206 FCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEVGMDCGFFHLGNFMKEFKKYTE 265 Query: 273 CSPSDYRRQ 281 +P YR++ Sbjct: 266 TTPLQYRKK 274 >UniRef50_C6CT34 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT34_PAESJ Length = 281 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 2/119 (1%) Query: 160 LYYENFKNAYRSEQGYIKK--DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 L+Y+ +SE+ K +LI++ Y+++++ E ITL QL+++F Y F Sbjct: 151 LFYQLINRVLQSERAQQNKASHLLIEEATAYIHDHFDEPITLFQLAERFGLKPKYFSSLF 210 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 + I PI+Y+IQ R+ A L + + A ++ VGY++ +F++LF +H G SP Sbjct: 211 QRYTGIGPIDYLIQYRINRAYELLMTGQFTVAAVARSVGYQDAYYFSRLFKKHKGSSPG 269 >UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LA37_RUMHA Length = 326 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/264 (21%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV--ASDVNDP- 88 ++ + +H H+ ETE IY+ KG +++ + ++ I G +H + S+V+ Sbjct: 52 QYFAPYHWHE-ETEFIYITKGSLMLRTETNSQLLTEGNVYFINPGMVHGIFGHSEVSHHY 110 Query: 89 ATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV-------IKTLFNELSVILPQS 141 A + F +N+LL P + +G + I +L ++ + + + Sbjct: 111 ALLFPMSFLSFSQYDICQNELLTPLLSKKLLFPEGSSLSLEISLQIGSLISKAARLYLED 170 Query: 142 KNSQTSSLWDAFAYTLAILYYEN--FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 ++ T+ + + ++ F +A + E ++ +K + Y+ +Y E +TL Sbjct: 171 TSANTALSIKIILLQILEILFQEHAFSSAQKHEAEKDFENHSLKSVFSYIEKHYMEPVTL 230 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 E L++ + +Y C F ++ +P Y+ + R+ +A L T E++ GYEN Sbjct: 231 EALAECIPLNKNYFCKFFKEKVGKTPFAYLNEYRINQAAAQLLKTTAPITEVALNNGYEN 290 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFK 283 + +F + F + C+PSD+R K Sbjct: 291 ISYFVRQFKHYKHCTPSDFRTSAK 314 >UniRef50_C5RJF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJF8_CLOCL Length = 305 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 61/102 (59%) Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D ++K I+ Y++ NY + I LE L++ F + +Y+ F S +Y+ + R+ AK Sbjct: 197 DNIMKRIVNYIDRNYYKDIKLEMLAEIFNYNSAYLGKMFKNHTNESFNSYLDKIRIENAK 256 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 LTN L ++S +VGY+N+D+F F R+VG SP +Y++ Sbjct: 257 KLLTNDSLKVYQVSEKVGYKNIDYFYSKFKRYVGMSPKEYKK 298 >UniRef50_C7RDA0 Transcriptional regulator, AraC family n=2 Tax=Anaerococcus RepID=C7RDA0_ANAPD Length = 287 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 15/243 (6%) Query: 48 YVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT-TCTCALYGF------- 99 ++ +G F I++ +D+V+I H + D ++ A T L Sbjct: 48 FIVEGSGTFFIENDSIKIKKNDLVIINSNIGHNLYVDEDEYAVKTLGFGLESIGLTSHLD 107 Query: 100 QFQGAEENQLLQP-HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLA 158 + Q EE +L H + E+ + NE S+N +L DA A Sbjct: 108 EVQSEEELELDNFFHITWENKEAKINEIFTKIVNEF-----HSENLYAKTLADALASYFL 162 Query: 159 ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 I + +F+N I + I I Y++NNY ++LE LS + ++ EF Sbjct: 163 INFLRHFRNEIEVVPD-ININRRIDYIKSYIDNNYSLDLSLEGLSNMAYMNKFHLIAEFK 221 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + YR++PI Y+I +R+ +K L +T S I+ VG+ + +F ++F + VG +PS + Sbjct: 222 QSYRVTPIEYLILKRIEVSKGLLISTNHSMETIAEIVGFNSQSYFNQVFRKKVGITPSQF 281 Query: 279 RRQ 281 R++ Sbjct: 282 RKK 284 >UniRef50_C7GA03 DNA-bindng response regulator, AraC family n=2 Tax=Clostridiales RepID=C7GA03_9FIRM Length = 276 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 66/111 (59%) Query: 172 EQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 E G ++ + ++I Y++ +Y+E I+L+ ++++ S +Y C F + + S I Y+ + Sbjct: 152 ENGNVRMSAVAENIRQYIDMHYKEDISLQSVAEEMNYSDAYFCKIFKQCFDKSFIGYLTE 211 Query: 232 RRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 R+ AK L + ++ +IS VGY + ++F K+F R +G +P++YR + Sbjct: 212 YRLERAKQLLADVRINVKDISVNVGYRDSNYFTKVFKRAMGSTPTEYRMEI 262 >UniRef50_Q1WTL6 Transcriptional regulator, AraC family n=2 Tax=Lactobacillus salivarius RepID=Q1WTL6_LACS1 Length = 278 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 15/244 (6%) Query: 48 YVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEEN 107 Y+ G F D S+Y HA +IE G+ +D N P + F G + Sbjct: 45 YILAGSGTFKTDQSIYKLHAGQGFLIEPGQETTYIADKNTPWSYVWIG-----FSGNFAD 99 Query: 108 QLLQPHSC----PVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYE 163 QL+Q P+ + K +I+ + L +S NS T L + +Y L L Sbjct: 100 QLMQQIPLNQREPIFSLNDPKRLIELVNLLLL----KSVNSTTKKLLN-LSYLLEFLSII 154 Query: 164 NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRI 223 + E D+ ++ + +N N+ I+ L++ SY+ F K + Sbjct: 155 SNATIISRESTTSISDIYVEKAISLINKNF-PNISAASLAQMIGLDRSYLGKRFKKVTGM 213 Query: 224 SPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 + Y+ ++T+A+ + +T LS EIS R GY+ VD A+ F G +PSD+R Q K Sbjct: 214 TLQTYLKNYKITQARHLIESTNLSLLEISQRCGYQRVDSLARTFKATYGLTPSDFRLQQK 273 Query: 284 NCFA 287 Sbjct: 274 ELLT 277 >UniRef50_C4FYZ2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYZ2_ABIDE Length = 535 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 59/94 (62%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 ++ NNY + I++ +++++ +++Y F K+ S IN++ + RM AK L NTE + Sbjct: 437 FMQNNYNKDISINDVAERYNLNINYFSVLFKKKTSRSAINFLTELRMKAAKEYLKNTEEN 496 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 A+IS +VGYE+ +F ++F + G +P YR++ Sbjct: 497 VADISKKVGYEDTQYFFRVFKKSEGITPLMYRKR 530 >UniRef50_Q9F4J7 PblR n=2 Tax=Streptococcus RepID=Q9F4J7_STRMT Length = 293 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 14/257 (5%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 +H H E E+IYV KG A I+S + + DI +I+ LHA+ S D T Sbjct: 33 YHCHP-ELEIIYVTKGSAIVHINSERFESREGDIFLIQPTSLHAIYSH-KDQELFSTSFR 90 Query: 97 YGFQFQGAEE-----NQLLQP----HSC--PVIAAG-QGKEVIKTLFNELSVILPQSKNS 144 + G + + +QP H C P I+ G + + I++ L IL + Sbjct: 91 IHLDYLGRSQIDSFSQRYIQPLHSGHFCLTPQISPGDKAYDQIQSCLLSLFSILEEKGIY 150 Query: 145 QTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 + L +L+ + N + ++ Y K L + L N+ ++ I +EQL+ Sbjct: 151 YDLLIKSKLYELLHLLFKYRYVNRHYTDDTYQKYQKLKESDLLPSNSTTQKAIHIEQLAA 210 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 F S ++ F + S ++Y++Q R+ ++ L T LS EI+ +V + N+ +F Sbjct: 211 TFGYSKNHFMSIFKQHTGASCMDYLLQLRLEKSCEKLVQTNLSIQEIASQVRFTNLSNFN 270 Query: 265 KLFLRHVGCSPSDYRRQ 281 + F +H +P YR Q Sbjct: 271 RQFKQHYYLTPRQYRNQ 287 >UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWJ7_9GAMM Length = 293 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 19/253 (7%) Query: 35 SGHHV----HDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 SGH + HD+ L+Y G + T+ A I+++ +G H +D +DP T Sbjct: 47 SGHRMQRERHDDNL-LLYCTSGRGQLTVGDWHSQVTAGHIMLLPQGLAHTYEADGDDPWT 105 Query: 91 TCTCALYGFQFQGAEENQLLQ----PHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 LY FQGA +Q P+ AG +I N L V + T Sbjct: 106 -----LYWVHFQGASTRVFMQYLGYREDRPLTNAGVSPLLIGAFTNLLEV---RRTGYST 157 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + +A + ++ + + + + G ++ + + Y+ + + ITL+ L++ Sbjct: 158 RAFINASNHLRHLITQMSMEIS--AHAGRLQSGFELDHVQAYMLEHIDQTITLDALAQVA 215 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S + + + PI + + +M A L +T++ +EI+ VGY++ +F++L Sbjct: 216 NMSKYHFSNRYKTLTGYPPIKHFLNMKMEHACHLLDSTDMGVSEIARGVGYDDPLYFSRL 275 Query: 267 FLRHVGCSPSDYR 279 F R VG SP YR Sbjct: 276 FSRTVGSSPRGYR 288 >UniRef50_C6CVW8 Two component transcriptional regulator, AraC family n=2 Tax=cellular organisms RepID=C6CVW8_PAESJ Length = 543 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 56/93 (60%) Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 L +Y E +TL+ ++ + ++ F KE R + + Y+ R+ +AK L + + Sbjct: 445 LQRDYAESLTLQSVASAVHVTPVWLSKLFKKEKRQTFLEYLTDIRIEKAKEMLGDIQYKV 504 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +IS++VGY++ HF+KLF + VGC+P +YRRQ Sbjct: 505 YQISYQVGYKDPVHFSKLFKKQVGCTPKEYRRQ 537 >UniRef50_C5RDR5 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=C5RDR5_CLOCL Length = 294 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 61/103 (59%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I+ ++ Y++ N+ +K+T+ L+ S S+ F +E +++PI Y+I R+ +AK L Sbjct: 191 IEKVIAYMHQNFGKKLTIANLALVANMSESHFIRTFKQETKLAPIEYLINLRINKAKKLL 250 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + + EI+ + G+ + HF+ F + + C+PS+Y+ F+N Sbjct: 251 RSKSKTVTEIALQCGFNSSSHFSSCFTKQLDCTPSEYQNMFQN 293 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 61/107 (57%) Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 KD I L +L+++Y E++++ QL+ Y+ F + + P Y+++ RM +A Sbjct: 173 KDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRKYLSSLFKRATGMPPQQYLLKYRMEKA 232 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 L N S AE++ VGY++ F+K+F + VG SPSDYR Q++ Sbjct: 233 CALLRNGHYSIAEVARSVGYQDALLFSKMFKKTVGTSPSDYREQWQK 279 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 57/101 (56%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 ++ L Y++ Y ++ LE +++ SVS C +F + SP++Y+I R+ ++ L Sbjct: 197 VRCCLEYIHKEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISYRVRMGEYML 256 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +++ S EI+ VG+ HF+ F R++GC+P YR+ Sbjct: 257 AHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHL 297 >UniRef50_C6VUN3 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUN3_DYAFD Length = 308 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 68/112 (60%) Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 A + Y +D + ++ Y+ N EKI +E LS+K S + F +E+ ISP++ Sbjct: 190 AATDDAAYQHEDNPLAFVVNYIKANINEKIQVEDLSEKACMSRASFYRAFKREFSISPLD 249 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 ++++ ++ +AK L++T+ S ++I +++G+ ++++F + F + G SPS YR Sbjct: 250 FILREKIKKAKQLLSHTKDSISDICYQLGFSDLNYFGRQFRKSEGISPSQYR 301 >UniRef50_C6CVX2 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVX2_PAESJ Length = 492 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 70/117 (59%), Gaps = 2/117 (1%) Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 ++ G + +++++ L+ Y +I+L+++++K+ S +Y+ H F +E S I+Y Sbjct: 378 HKRRPGEVNALPIVEEVTRDLDRMYAHRISLKEMAQKYYISPNYLSHMFKQEKGQSFIHY 437 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 +I +R+ EA SL ++ E+ VGY++ F+KLF +H+G SP +Y RQ KN Sbjct: 438 LIHKRL-EAAVSLLKKDIPLYEVGKLVGYDDYAQFSKLFKKHLGMSPLEY-RQRKNA 492 >UniRef50_C6D1V9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1V9_PAESJ Length = 279 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 18/258 (6%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC----- 92 H H ++ EL YV +G ID Y + ++V ++H + V + Sbjct: 25 HAH-SQMELTYVHEGRGLLIIDGKSYSIEPNTLLVFPPFQMHRIQIQVTEAEPFIRSVLL 83 Query: 93 --TCALYGF-----QFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 L+G+ + + +LQ + + A E L + S+ + + + Sbjct: 84 FEPAVLHGYLNDFPSLKSFFQRLMLQQANVHPVNAMPENEPFVALLRQFSITMGGKREAD 143 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL-IKDILFYLNNNYREKITLEQLSK 204 F +L K + E Y+KK L +++I+ ++ +Y + LE L+ Sbjct: 144 FEENMGVFLLSLV----HQLKQSPDGESAYLKKHNLHVEEIIGWIEKHYMDPFRLEDLAG 199 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + S ++ H F + + + Y R+ A L T L +EI +RVG N +F+ Sbjct: 200 ELHLSPYHVAHLFKESTGTTIVAYTQATRIRHACSLLRKTTLPLSEIGYRVGIANPSYFS 259 Query: 265 KLFLRHVGCSPSDYRRQF 282 K+F + +G +P YR+ Sbjct: 260 KIFRQIMGVAPLTYRQHL 277 >UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0R7_9CLOT Length = 322 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 17/238 (7%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G ++ Y D I +GR H +D DP + F+G Sbjct: 90 LIYCTEGKGCIEVEDRTYHIGRSDAFCIPKGRRHKYYADPEDPWSILWA-----HFKG-- 142 Query: 106 ENQLLQP-HSCPVIAAG--QGKEVIKTLFNELSVILPQSKN-SQTSSLWDAFAYTLAILY 161 E L P C V+ Q + LF L +L ++ + + L+ +Y Sbjct: 143 EVTLCYPLEECRVVHMNSRQSDNRMMVLFKLLFRVLERNYTLGNFIYISQVLSLILSEIY 202 Query: 162 YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEY 221 + ++++ ++ D + ++ ++ N + +TLE++S++ + S SY+ F + Sbjct: 203 FRE-----KTDESTVQ-DRHVTMVIRFMYENLKRSLTLEEISEEVKLSRSYLNTIFKTQT 256 Query: 222 RISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 SP+ + I +M EA L T++ E+S +GYE+ +F+++F + VG SP DY+ Sbjct: 257 GRSPVEFFIHLKMQEACKLLKATDMYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYK 314 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 30/284 (10%) Query: 16 AGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 + K P + S P++ H H E E+I + G ID+ Y DI+ + Sbjct: 14 STKFPFAYYYVNSYHPRYHMITHWH-KEYEIIRILSGTFNIKIDAVSYTVKTGDILFLNS 72 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGA-EENQLLQPHSCPVIAAGQGKEVIKTLF--- 131 G +H+ CT F ++N L+ +I K+ I+ LF Sbjct: 73 GAIHS------GIPVDCTYECLVFDISSLLQQNSLVNTELNALI---HYKKKIQLLFDKK 123 Query: 132 --------NELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY--IKKDVL 181 N++ I+ KN ++ Y L ++ KN Y E+ + I K L Sbjct: 124 LGAVYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLV---EEKNLYIKEKEFSAINKKSL 180 Query: 182 --IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 IK +LF++ Y E I+LE ++K + + Y C F + + +P+ Y+ R+ A Sbjct: 181 SRIKKVLFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACE 240 Query: 240 SLTNTELSQAEISWRVGYENVDHFAKLFLRH-VGCSPSDYRRQF 282 + + S ++++ G+ + +F K+F ++ G +P +Y + + Sbjct: 241 KIKFFDSSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSKLY 284 >UniRef50_B8I993 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I993_CLOCE Length = 276 Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 1/102 (0%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 + I+ ++ NN+++ ITLE+L+ S SY+C F KEY ISP Y+++ R+ AK L Sbjct: 171 LNSIIGFIKNNFKKDITLEELATHAGISSSYLCRIFKKEYGISPFTYILRCRVNAAKEEL 230 Query: 242 TN-TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 N + S IS G+ + +F +F + G SP+ +R + Sbjct: 231 INFPDKSIKAISLDTGFNSCSYFGSVFKEYEGYSPNRFRELY 272 >UniRef50_C6CTG8 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTG8_PAESJ Length = 255 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 58/99 (58%) Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 I+ Y+ ++ E ITL+ L+ R SY+ F K+ + +Y+ RR+ AK L T Sbjct: 154 IIAYIEEHFAEDITLKSLADWIRMDASYVSDLFKKKTGSTLTHYIQNRRVAAAKMLLAET 213 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 E + ++I VG+EN ++F K+F R G +P++YR++ K Sbjct: 214 ERTVSDIGRTVGFENDNYFIKIFKRWCGVTPNEYRKEQK 252 >UniRef50_Q11HY1 Transcriptional regulator, AraC family with amidase-like domain n=4 Tax=Proteobacteria RepID=Q11HY1_MESSB Length = 361 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 42/67 (62%) Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 FT +SPI YV + R+ +AK L TE+S EISW+VGYE F +LF R G +P Sbjct: 270 FTSAAGLSPITYVQRLRIEDAKRRLERTEVSVDEISWQVGYEEPAFFRRLFKRFTGLAPG 329 Query: 277 DYRRQFK 283 YRR+FK Sbjct: 330 AYRRRFK 336 >UniRef50_C5FB19 Transcriptional regulator n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5FB19_LACPA Length = 362 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 63/100 (63%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 L + + Y+ N+ +K++L L+KKF+ S S + H F ++Y ++ Y+ ++ AK+ Sbjct: 259 LAEQVALYIQNHVNQKLSLALLTKKFKCSDSSLAHLFKEKYNVTVGAYINSYKVDAAKYM 318 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 LTN+++S +EI++ + + + +F K+F + G +P+ YR+ Sbjct: 319 LTNSQISISEIAYALSFNSPSYFMKVFKKTSGLTPTRYRK 358 >UniRef50_C6IXH5 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXH5_9BACL Length = 524 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 61/100 (61%) Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ Y++ +R K+ L+ L+K+F + +Y+ F KE + +Y+ ++R+ EAK L T Sbjct: 412 VIQYVDEEFRSKLKLQTLAKQFHMNPTYLGQVFKKETGKTFNDYLNEKRLEEAKRLLKRT 471 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + ++I+ +VGY N D+F F + +G PS Y+ +F++ Sbjct: 472 SMKISDIALQVGYPNTDYFISKFKQSIGMLPSVYKSEFQH 511 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Query: 188 YLNNNY-REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTEL 246 ++ NY E ++L++++ SV+Y+ F E ++ + Y++Q RM +A+ L +EL Sbjct: 252 FIEENYAMEDLSLQEVADSVGMSVTYLSRTFKSETNMNFVKYLVQVRMEKARELLAESEL 311 Query: 247 SQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 S E ++RVG+ + HF+K F + G +PS YR+Q K Sbjct: 312 SAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAYRKQCK 348 >UniRef50_C9A6S2 Response regulator receiver n=5 Tax=Bacteria RepID=C9A6S2_ENTCA Length = 507 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 92/185 (49%), Gaps = 13/185 (7%) Query: 107 NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLA-ILYYENF 165 N ++ + P Q + TL + L P + + S L F + + + Y E+F Sbjct: 321 NDMILSNVDPTFLKQQASSIFYTLLSRLEEEFPTA--PRFSRLKAEFLHAIGHVQYLEDF 378 Query: 166 KNAYRSEQGYIKK----------DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICH 215 + + I++ D L+ I ++ +NY + ++L +L++ F S +Y+ Sbjct: 379 SDLLLATIDDIRQQLTTLSPLDEDDLLVAIQRFIQDNYTKSLSLSELAETFHFSYTYLSA 438 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 + + ++S YV + R+ +AK LT ++L+ +EIS VGY ++ +F+++F + +P Sbjct: 439 FLSAKLKMSFSEYVKKTRLDKAKELLTQSDLNLSEISEAVGYSDISYFSRIFKKECQVTP 498 Query: 276 SDYRR 280 S YRR Sbjct: 499 SKYRR 503 >UniRef50_A9QDR4 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=A9QDR4_PAESJ Length = 522 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 10/145 (6%) Query: 140 QSKNSQTSSLWDAFAYTL--AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKI 197 Q NS+ L F L A +Y +N +S+ G I+ I Y+ NY E I Sbjct: 382 QGSNSRLQDLKGLFTDFLREAAVYLAELRNE-QSKGG-------IERIKKYIEANYTENI 433 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 +L+ ++ KF + Y+ F K Y I ++++Q R+ EAK L T+L EI+ +VG+ Sbjct: 434 SLKSIAGKFYMNSVYLGQLFRKTYGIYFNDFLLQIRIGEAKKLLRQTDLRMYEIAEKVGF 493 Query: 258 ENVDHFAKLFLRHVGCSPSDYRRQF 282 +N D+F F + +P+DYR + Sbjct: 494 QNADYFVTQFEKLEKVTPTDYRNKL 518 >UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KAQ8_BACHD Length = 287 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 17/258 (6%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G VHD L V +G F Y A D I L SD DP Sbjct: 30 PYHKVGPQVHDYFL-LHVVLRGKGSFHCAGKTYSLSAGDSFFIYPKELVTYESDRTDPWY 88 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLF-------NELSVILPQSKN 143 A G F+ + +QP S P+++ G +IK LF EL V N Sbjct: 89 YTWVAFQGPFFEETLRSAGIQPES-PIVSLGGKGSMIKQLFYDLYSSMTELKVASSLKTN 147 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + + F IL + K ++ +Q I+D++ L+ Y E +++E ++ Sbjct: 148 AYLRLIISEFIEQTTILDEHSQKEDHQLDQH-------IQDVIRLLSLRYFEPLSIETIA 200 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + + +Y +F + SP Y++ RM +A+ +L L+ E++ VGY + +F Sbjct: 201 ASYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAE-ALLQKSLTIQEVASSVGYRDPLYF 259 Query: 264 AKLFLRHVGCSPSDYRRQ 281 +K F + G +PS +R+Q Sbjct: 260 SKQFKQWSGVAPSVFRQQ 277 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/285 (19%), Positives = 115/285 (40%), Gaps = 49/285 (17%) Query: 32 KWESGHHVHD----NETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 ++ G HV D +E E Y +G F +D+ + A + V I+ G +HA + + Sbjct: 28 RYGPGEHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGGDIHAAHAHGDQ 87 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 CA + F + QLL + +E + E P+ +T+ Sbjct: 88 -----GCAFFSLVF----DTQLLASAHYDAV-----QENLVLPLQERKATFPRHIRRETA 133 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI------------------------- 182 + + +A++ + +G +K + + Sbjct: 134 ADLSLLEHIVALM--RSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSK 191 Query: 183 ----KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 K ++ ++ +NY I L +L+ S C F R +P++Y+ R+ +A Sbjct: 192 IDRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAA 251 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 L E ++I+ VG++N+ +F ++F + + CSPS++R++ + Sbjct: 252 ELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQ 296 >UniRef50_A8S1Z0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S1Z0_9CLOT Length = 151 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 56/100 (56%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 ++ L +++ Y KI LE +++ S S C +F + SP++Y+I R+ ++ L Sbjct: 49 VRSCLTFIHQEYARKIRLEDIARAASVSTSECCRDFKEILGQSPVDYLITYRVRMGEYLL 108 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 T+T S EI+ G+ HF+ F R++GC+P YR++ Sbjct: 109 THTGKSILEIALAAGFSGSSHFSNTFTRYMGCTPLHYRKR 148 >UniRef50_C6CT79 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CT79_PAESJ Length = 300 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 62/104 (59%) Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D +++ +L Y++ + E+I ++++S+ R + SY F K +S ++YV ++R+ +A Sbjct: 194 DAVMRPVLDYVSRHLSERIDMDEVSRIARMNYSYFSKYFKKAVGVSFVDYVNRQRILKAA 253 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L S + I+ VG EN+ HF +LF R+ GC+P +Y R+ Sbjct: 254 HMLVAEPASVSSIAASVGIENMAHFYELFKRYNGCTPKEYARRL 297 >UniRef50_C3ANZ9 Methylphosphotriester-DNA alkyltransferase n=4 Tax=Bacillales RepID=C3ANZ9_BACMY Length = 215 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 56/99 (56%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 + I Y++ +YRE +TLE L+ S ++ F + I+P+ Y+ Q R+ +A L Sbjct: 109 VTQITAYIDKHYREALTLEILADMCHGSPYHLQRTFKRMKGITPLEYIQQIRVAKAMHYL 168 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +T L+ EI + +G N HFA LF + G +P++YR+ Sbjct: 169 ADTNLTIMEIGFTMGIPNTAHFATLFKKKTGYTPTEYRK 207 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 4/115 (3%) Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 +R +Q Y K KD Y++ +Y E +TLE+++++ S Y F + + I+ I+Y Sbjct: 401 WRQQQAYGKLGK-AKD---YIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDY 456 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 V R+ AK +L T+ S EI + VGY + ++F+++F + G SPS+YR++ + Sbjct: 457 VTNVRIERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQ 511 >UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B4A5A3 Length = 302 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 21/247 (8%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G ++I D +IE G H A+ N P ++Y F G + Sbjct: 69 LIYCTEGEGWYSIHGQRQKVCKDQFFIIEAGLPHIYAASENSP-----WSIYWLHFTGEK 123 Query: 106 E-------NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP-QSKNSQTSSLWDAFAYTL 157 N+L + P ++ + ++ L + ++ T LW A Sbjct: 124 SHLFNSFYNKLHKIDESPNARIKDRMQLFEEIYQNLEMGYSIENLEYTTLCLWHFIA--- 180 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 + + F+ R++QG + ++ + Y+ N +K++L+ ++ S S+ F Sbjct: 181 SFKFVSQFREINRAKQGDVTQEAIS-----YMRKNIEKKLSLDDIAGSVNYSSSHFGQVF 235 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 K+ +P+NY Q ++ +A L ++L EI+ ++G+ + HF+K+F + +G +PS Sbjct: 236 LKKSGYTPLNYFNQLKIQKACQLLDFSDLKIKEIAEQLGFYDQYHFSKVFYKQIGETPSS 295 Query: 278 YRRQFKN 284 Y+++ K Sbjct: 296 YKKRNKG 302 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 58/93 (62%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ NNYREK+TL++++ S C F + R+SP+ Y+ + R++++ L +TELS Sbjct: 196 YIQNNYREKLTLDKIAGAGAVCRSKSCQLFRQYVRMSPVAYLTKYRLSKSAELLRDTELS 255 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +EI+ G+++ ++ LF + G +P +YR+ Sbjct: 256 VSEIASLCGFQSPSYYINLFKKETGQTPLNYRK 288 >UniRef50_UPI000178960C transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178960C Length = 743 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Query: 157 LAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNY-REKITLEQLSKKFRASVSYICH 215 + + E F +++ + L++++ Y+ +Y + +++L+ L KF S Y+ Sbjct: 617 MVLQLLEQFAERLDTQRNLRSQGNLVQEVKAYIEKHYTKAELSLDYLQDKFGISGKYLSR 676 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 F +EY + ++++I R+ EAK LT + LS EI+ RVGY + FA+ F + G P Sbjct: 677 LFKEEYGLKFVDFLIDLRIQEAKRLLTESALSVQEITERVGYSSPISFARTFKKITGVPP 736 Query: 276 SDYRR 280 DYR+ Sbjct: 737 MDYRK 741 >UniRef50_C5RM76 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RM76_CLOCL Length = 364 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 61/99 (61%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 +IK+I Y+ NN + L+ +++KF + +Y+ + F + + +YV R+ A++ Sbjct: 262 IIKEICEYILNNPSADLKLKAIAEKFYINNTYLSNNFATKTGVGFNDYVTMVRLARARYL 321 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 L NT+L EI ++GY ++++F+KLF + G +PS+YR Sbjct: 322 LVNTKLKNYEIGSQIGYHDINYFSKLFKKEYGKNPSEYR 360 >UniRef50_UPI0001851370 two component AraC family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001851370 Length = 253 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 55/97 (56%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 YL Y E I L+ ++ F S YI +F + + ++ +Y++ RM +A L T L Sbjct: 151 YLKEYYHEDIKLQDIADTFYISREYISRKFKEHFHLTITDYLVDLRMKKAMELLDRTNLK 210 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 EI+ +VGY + +F K+F + G +P+DYR++ KN Sbjct: 211 VYEIAEKVGYVDDKYFRKVFKKFAGVTPNDYRQKDKN 247 >UniRef50_C0ERT2 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERT2_9FIRM Length = 340 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 60/96 (62%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ NN +I+L +L+ + S Y+ F K Y+IS ++Y+ R++ +AK+ + +E++ Sbjct: 238 YIENNKNNEISLSELADEAGISSGYLSRIFKKYYKISVVDYIHLRKLLQAKYYMATSEMN 297 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 ++IS+ +GY +F K+F ++ G +PS + + F+ Sbjct: 298 ISDISFLLGYSEAGYFCKIFKKYEGQTPSAFNKNFQ 333 >UniRef50_A8U767 Transcriptional regulator, AraC family protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U767_9LACT Length = 262 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 61/98 (62%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 L+K+++ Y+ N+ E++T+ LS+ F + S++ +F KE + YV Q+++ AK Sbjct: 158 LVKEVVNYIGNHISEEVTVTILSETFHVNDSHLARKFKKETNYTISEYVNQQKIEAAKLL 217 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 L E+S E+S R+GY + +F+K+F + G +P++Y Sbjct: 218 LQGKEMSVGEVSERLGYNSSSYFSKVFKKLTGEAPANY 255 >UniRef50_C4ZBP1 Two-component response regulator n=2 Tax=Clostridiales RepID=C4ZBP1_EUBR3 Length = 297 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 53/101 (52%) Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D + + Y N NY I +E+ + S+S+ F K +P+ ++ RMT A+ Sbjct: 193 DSQMDTAITYFNTNYNRSINVEEYASSIGMSISWFIRSFRKYTGNTPVQFLTALRMTNAQ 252 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 L T S EI+ VGY N +F++LF + GCSPS+YR Sbjct: 253 VLLETTSYSINEIAGIVGYNNPLYFSRLFHKQKGCSPSEYR 293 >UniRef50_Q187N6 AraC-family transcriptional regulator (Fragment) n=2 Tax=Clostridium RepID=Q187N6_CLOD6 Length = 130 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 4/107 (3%) Query: 177 KKDVLIKD-ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR-RM 234 KKD L IL Y+ +NY + ITLE+ + +F S+ Y C + KE ++QR R+ Sbjct: 22 KKDNLKNTHILTYIQDNYFD-ITLEEFANEFHFSIPY-CSKIIKEIAGCNFTQLLQRIRL 79 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 A+ L NT +S A+IS VGY NV+HF +LF + SPS YR+ Sbjct: 80 ERAESLLINTNISIADISNNVGYPNVEHFIRLFNKKYNMSPSKYRKN 126 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 54/100 (54%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 ++ I ++ + E+ L++L+++ S + C F K +SP Y I+ RM A+ L Sbjct: 209 LRRITDFMEAHLDEEFRLDELAREAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLL 268 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 T S E+ VGY + HFA++F R G PS+YRRQ Sbjct: 269 RETSRSVIEVGLEVGYSSPSHFAQVFQREAGVPPSEYRRQ 308 >UniRef50_UPI00019065BD helix-turn-helix domain-containing protein n=2 Tax=Rhizobium etli RepID=UPI00019065BD Length = 250 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 55/103 (53%) Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D ++ ++ Y+ + + I+L+QL+ + S + F SPI YVI R+ A+ Sbjct: 148 DRRLRKVIAYVQEHLTDDISLDQLASEAAMSRYHFARAFKAATGRSPIQYVIDERLDRAR 207 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 T + AE+++RVGY +V F + F + VG +P+ +R Q Sbjct: 208 LLFKTTSATVAEVAFRVGYADVSRFGQHFRKRVGITPAQFRSQ 250 >UniRef50_A0Y944 Transcriptional regulator, AraC family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y944_9GAMM Length = 272 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 15/258 (5%) Query: 33 WESGHHV-HDNETE--LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 + GH + D+ ++ LIY + G D D++++ G H + ++P Sbjct: 24 YAKGHQMLRDDHSDNLLIYCEDGNGHVKTDKFYGPVTKGDVILLPSGHAHHYWASDDNPW 83 Query: 90 TTCTCALYGFQFQGAEENQLLQP---HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 T +Y F G + NQL++ + V+A+ + ++ + FN L + L QS QT Sbjct: 84 T-----IYWVHFDGLQANQLIKELDFDAEQVVASIGQQPLLASDFNRL-LSLRQSGYRQT 137 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + A A T ILY+ + RS + + + ++ + N + L+ ++ Sbjct: 138 VFNYAA-ALTRQILYFLALQ--IRSSNTLRRHNFNLDELRSLMLENIEGDLDLDTMAACA 194 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 + S + ++ K ISP+ + I +M A + L + S ++S +GY + +F++L Sbjct: 195 QLSRHHFADKYKKLTGISPVKHFIHLKMERACYLLDTSNNSAKQVSAHLGYTDPLYFSRL 254 Query: 267 FLRHVGCSPSDYRRQFKN 284 F + +G SPS YR+ + Sbjct: 255 FKKVIGISPSAYRKGLRG 272 >UniRef50_C4G4F0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G4F0_ABIDE Length = 512 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 58/98 (59%) Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 IL Y+N+NY+ + + +LS K S +YI F K+ + Y+ + R+ +AK L T Sbjct: 411 ILSYINDNYKSQAIVSELSSKLFFSRNYISALFKKDTGTTISRYITEVRLCKAKQLLLGT 470 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 LS +EI+ GY ++ HF+++F G SP +YR+++ Sbjct: 471 SLSISEIALDTGYFDISHFSRVFKEEYGDSPLEYRKKY 508 >UniRef50_A8RW11 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW11_9CLOT Length = 295 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 57/101 (56%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 L+ DI Y+ +Y + ++ + LS+ F S + + H F + ++ +Y+ + R+T AK Sbjct: 192 LVYDIYEYIGGHYSDNLSTDSLSRLFLISKTQLYHVFKEISGMTVSDYITEYRITRAKDF 251 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 L NT+ S I VGY N+ F+++F GCSP YRR+ Sbjct: 252 LINTDYSVEMIGQAVGYTNLSSFSRVFKEQAGCSPIQYRRK 292 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 63/105 (60%) Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 +K +L+ +I+ Y+ ++ E ++L LS+ S +YI F +E SPINY+I+ R++ Sbjct: 171 QKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSR 230 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 A+ L N ++ + + VGY + +F+KLF ++ G PS+ R+ Sbjct: 231 AEELLKNKNITVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRK 275 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 25/291 (8%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLY 63 D ++ L V G FS K+ +G H H E E+I + +G I++ + Sbjct: 3 DENNKELAVHGNYEFPCAVYFSYVSKYTAGEIDWHWHK-EIEIINIYQGTLYVEIENKKF 61 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ-----GAEENQLLQPHSCPVI 118 + D + I +H + + + C + F F G + N + Q + P+I Sbjct: 62 ILSKGDSLFINSEEMHFMKMNTKEE-----CVIISFVFNKSLICGDKGNNIEQKYIDPLI 116 Query: 119 AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 + + L E S L Q+ S ++++ + + + E N R Q ++K Sbjct: 117 NCKELSAL--ELTKEDSKKLAQAYYSYSNNIL-GYEIIVRNILSEILLNIIRKNQKLLEK 173 Query: 179 DV--------LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 IK +L ++ NY E I+L ++K+ F + ISPI Y++ Sbjct: 174 SSNNSNTDKERIKRMLAFIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLL 233 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 + R+ A L N+E AEI + G+ + +F+K+F R +G +P +YR+ Sbjct: 234 KYRIYTAAEMLRNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKN 284 >UniRef50_A4XQP9 Transcriptional regulator, AraC family with amidase-like domain n=22 Tax=Pseudomonas RepID=A4XQP9_PSEMY Length = 335 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 60/109 (55%) Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 + +DV + I +L +Y +K E ++++ S+ F P++Y+ + R+ Sbjct: 222 LHQDVTVLQIQQWLEEHYADKFRFEDVAREHGMSIRNFMRRFQGATGDKPLHYLQRLRIE 281 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 AK L++T S IS+ VGY++ FA+LF +H SP+ YRRQF++ Sbjct: 282 TAKSLLSSTRKSIKTISYEVGYDDASFFARLFRQHTELSPNQYRRQFQH 330 >UniRef50_C6CZ23 Two component transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ23_PAESJ Length = 522 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 59/100 (59%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K +L Y++ +Y E + L +++K F + SY+ F+ + ++Y+ + R+ +A L Sbjct: 420 MKRLLDYIHEHYAESLNLTEMAKHFHFNPSYLSSYFSTHHNEGFVDYLHRVRLEKASELL 479 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 E S +EIS VGY + +F K+F +H G SPS YR+Q Sbjct: 480 RAGEASISEISGMVGYSDHSYFCKVFKKHTGLSPSRYRQQ 519 >UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales RepID=Q64XT7_BACFR Length = 318 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 16/243 (6%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 IY +G F++D + + ++ G HA +D +P T +Y F G Sbjct: 80 FIYCTEGRGWFSLDGQKHPVVPNQYFILPAGLPHAYGADEKEPWT-----IYWIHFGGTL 134 Query: 106 ENQLLQPHSCPVIAAGQG--------KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTL 157 +C + G E+ + +F L + S SS++ Y Sbjct: 135 APLYCTHRTCRLTDIKPGMHSRISYRTELFEEIFRVLKMGYSLENLSYASSVFHH--YLG 192 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 ++ Y ++ A+ SE ++ + + Y+ N +K+TL +L+ S SY + F Sbjct: 193 SLRYLREYREAF-SEHRPAGEEDPVNAAIHYMKENLGKKLTLAELADYTGYSSSYFSNLF 251 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 K +P++Y Q ++ +A L T++ ++ +RVG E+ +F++LF + +G SP + Sbjct: 252 LKRTGYAPLSYFNQIKIQKACQFLDFTDMKVNQVCYRVGIEDAYYFSRLFSQIMGMSPRE 311 Query: 278 YRR 280 Y++ Sbjct: 312 YKK 314 >UniRef50_A9B1P7 Transcriptional regulator, AraC family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1P7_HERA2 Length = 168 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 55/94 (58%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++ Y E + L QL+++ S + F + + I+P Y+I RR+ A+ L ++LS Sbjct: 47 YIDGTYAEHVELPQLAEQIGFSHYHFLRLFQRNFAITPHQYLIHRRIERARELLVASDLS 106 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 E+ + VG++++ F+ LF R G +PS YRR+ Sbjct: 107 VTEVCFAVGFQSLGSFSSLFQRSTGHAPSHYRRR 140 >UniRef50_C6IWH3 AraC/XylS family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWH3_9BACL Length = 547 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 54/100 (54%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++ +Y E +T+EQL++ S Y + K+Y SPI YV ++RM AK + Sbjct: 186 YIDQHYNEPVTIEQLARVAELSPKYFAEMYKKKYGKSPIEYVTEKRMQRAKQLMATASAK 245 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 EI+ + GY + +F++ F + +G SPS Y R + A Sbjct: 246 LREIAHQTGYADEFYFSRKFKQEIGVSPSVYMRSRRRKLA 285 >UniRef50_C6D1C4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1C4_PAESJ Length = 297 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 7/139 (5%) Query: 147 SSLWDAFAYTLAILYYENFKNAY--RSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 S + + AY L +++ +AY +E G K D D++ Y+ N I +E L+K Sbjct: 147 SGILELIAYLLDHSSWDDLNDAYFIGNEVGKEKWD----DVILYIEQNLHHNIQIEDLAK 202 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 +Y+ F SPI YV +RR+ AK L T+L +EI+ +VG N + Sbjct: 203 VAYLHPNYLITSFKSIMGCSPIQYVTERRLELAKKLLKETDLPISEIAGKVGMLN-HYLP 261 Query: 265 KLFLRHVGCSPSDYRRQFK 283 +L RH G +P YRR K Sbjct: 262 RLLKRHTGITPKQYRRFMK 280 >UniRef50_Q9KBG9 BH1958 protein n=1 Tax=Bacillus halodurans RepID=Q9KBG9_BACHD Length = 516 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 1/106 (0%) Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D+L ++I Y++ ++ E I + LS++F SY+ F++ ISP Y+++ R+ K Sbjct: 403 DLLAQEIEAYIDEHFPEPINHQTLSQRFGLVPSYLSKIFSRYKGISPAKYIVKLRLEATK 462 Query: 239 -WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 L N L+ +I++ VG+E+ + +++F R G SPS++R+Q K Sbjct: 463 ELLLENPGLTIKDIAYVVGFEDPSYLSRIFKRETGLSPSEFRKQQK 508 >UniRef50_UPI000178A86D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178A86D Length = 747 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Query: 181 LIKDILFYLNNNYRE-KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 +I ++ Y+ ++ + ++L+ LS +F+ S Y + F EY + +++++Q RM A+ Sbjct: 634 MISEMKHYIEEHFDDPNLSLKHLSDRFQISGKYASYLFKMEYDMKFVDFLVQLRMKRAEE 693 Query: 240 SLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L T+LS EI+ ++GY N F ++F R G +P DYR+ Sbjct: 694 LLAQTDLSIQEIAEKIGYANSITFGRVFKRTSGVTPGDYRK 734 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 36/264 (13%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H+H N E+ Y+ G RF ++ +LY ++++IE G LH ++ + C + Sbjct: 24 HLH-NFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTY-ISGGSHERICITF 81 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNS------------- 144 F LQP + G+E + F++ V +PQS+ Sbjct: 82 SKSF--------LQP-----LFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREM 128 Query: 145 ---QTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILF-----YLNNNYREK 196 T SL+ A ++ ++ + N+ + D D + Y+ +NY+ Sbjct: 129 MYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSP 188 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 +TLE+ + S +Y +F Y+I R+ EA L +T+L EI+ G Sbjct: 189 VTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSG 248 Query: 257 YENVDHFAKLFLRHVGCSPSDYRR 280 + + ++F +F R G SP YR+ Sbjct: 249 FNDSNYFGDVFKRMKGISPCKYRK 272 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 57/107 (53%) Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 KDV IK L Y+ NY K+ + +++ + Y F + ++P Y+I R+ +A Sbjct: 172 KDVYIKKCLNYIEMNYSRKLLISEIAALLGLNTKYFSLIFKESIGVTPQQYIISFRVNKA 231 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + N +LS +IS VGY++ F+K+F + G SP YR QF N Sbjct: 232 CELMKNFKLSICDISRSVGYDDSLAFSKIFKKQKGMSPKKYREQFIN 278 >UniRef50_C6LL33 Two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LL33_9FIRM Length = 529 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 49/93 (52%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ N+Y E ITLE++S S +Y F K Y+IQ RM +AK L T Sbjct: 434 YIQNHYSEPITLEEVSSAVGLSTAYFSTLFKKTEGGGFAKYLIQVRMEQAKSLLRETNTP 493 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 AEI +VGY ++ HF F + VG P+ YR+ Sbjct: 494 VAEICRQVGYNDIKHFTHTFEKMVGVKPATYRK 526 >UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KK32_CLOPH Length = 295 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 63/100 (63%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I+ IL Y++NNY K+TLE++++ S C F + ++S +++Q R+ ++ L Sbjct: 193 IRSILSYVDNNYAMKLTLEEIAEHIHLCKSECCRLFKRYMKVSLFEFILQYRIEKSLNYL 252 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +++ S EI+ VG+ + ++++K+F + GCSP+ YR++ Sbjct: 253 ADSQYSIIEIANFVGFNDSNYYSKVFTKIKGCSPTKYRKK 292 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 22/265 (8%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P++ H H NE E+IYV+ G +D + A +I G +H P Sbjct: 29 PRYNMIPHWH-NECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSMHG-----GTPKD 82 Query: 91 TCTCALYGFQFQGA-EENQLLQPHSCPVI-----------AAGQGKEVIKTLFNELSVIL 138 C F + +Q+ H P+I A + + K + + + Sbjct: 83 NCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDAKAVIDAMLEKE 142 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 P + + L + +A E++++ + IKK K+++ Y+ NYR+ IT Sbjct: 143 PGYEFTVPGRLLCMLGHIVA--RQEHYQSG-ETAASDIKKVRRFKNVISYIEQNYRKNIT 199 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 LE+L+ + + +Y C F + +P+ Y+ R+ A + +T+ +I+ + G+ Sbjct: 200 LEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCGFN 259 Query: 259 NVDHFAKLFLRHVGCSPSDY-RRQF 282 + +F K+F G +P DY RR F Sbjct: 260 DYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_A6DMX5 Two-component response regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMX5_9BACT Length = 275 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 + D LI + YL+ + KI LE L+ SVS +FT+ R SP Y+I +R+ Sbjct: 168 QSDPLISKVDAYLDECHTGKIKLEDLANHCAMSVSSFRFKFTEITRTSPGRYIIYKRLER 227 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 A+ L N++LS EIS + Y +V F + F + +G +P Y R F +C Sbjct: 228 ARELLLNSKLSVLEISTELSYPDVSDFCRQFKKFIGVTPLQY-RAFPDC 275 >UniRef50_A6TTZ3 Response regulator receiver protein n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TTZ3_ALKMQ Length = 245 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 63/104 (60%) Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 +D +IK Y+ +NY EKI L+ ++ S +Y F ++ +++ Y+ R+ +A Sbjct: 138 EDHVIKGAKEYIEDNYSEKIQLKDVANHVGLSPTYFSKFFKRKTQMNFSIYLNMARIEKA 197 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 K + T L+ EIS+RVGYE++ +F+ +F ++ +PSDYRR+ Sbjct: 198 KELMRETTLTLNEISYRVGYEDLSYFSIVFQKYEASTPSDYRRR 241 >UniRef50_A4XMH2 Two component transcriptional regulator, AraC family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMH2_CALS8 Length = 476 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 54/94 (57%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y++N+Y E ++L++LS KF S++Y C F K S Y+ RM +A+ L T S Sbjct: 375 YIDNHYSEPLSLKELSAKFFISLNYCCELFRKVIGCSFTEYLTNLRMKKAEELLKTTNYS 434 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 AEI+ VGY + HF K F + G P+ +R++ Sbjct: 435 VAEIARLVGYNDYYHFNKAFKKFYGTPPATFRKK 468 >UniRef50_C6D0F8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D0F8_PAESJ Length = 275 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 2/114 (1%) Query: 170 RSEQGYI-KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 R+ Q Y +K+ ++ I+ L NY E + +E L ++ S SY+ F + ++ +Y Sbjct: 157 RNRQEYSSEKEATVQRIISVLEENYTEDLNMELLEERLHLSKSYLSKLFKEVTGVTIFHY 216 Query: 229 VIQRRMTEAK-WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 + RR+ EAK L ELS E+ +R+G++++ HF++LF ++ G P +R++ Sbjct: 217 IYTRRINEAKILFLMQPELSVTEVCFRLGFKHLAHFSRLFKQYAGMPPEQFRKR 270 >UniRef50_B9XAQ1 Transcriptional regulator, AraC family n=2 Tax=Verrucomicrobia RepID=B9XAQ1_9BACT Length = 326 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 55/95 (57%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ +N E +TL +++K S Y C F K + YV + R+ +AK L N L Sbjct: 230 YIEDNQAEDLTLSEVAKAVNTSTFYFCKMFKKATGLHFTEYVSRVRIEKAKNLLLNPNLR 289 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +E+++ VG++++ HF ++F + VG SP++YR Q Sbjct: 290 VSEVAFEVGFQSLTHFNRVFKKIVGQSPTEYREQL 324 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 123/299 (41%), Gaps = 43/299 (14%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLY 63 D +E L V G FSD K+ +G H H E E+I + KG I++ + Sbjct: 9 DKNNEELAVHGNYEFPCAVYFSDVSKYTAGEIAWHWH-KEIEIITIYKGTLYIEIENKKF 67 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ-----GAEENQLLQPHSCPVI 118 + + I +H + D + C + F F G + +++ Q + P+I Sbjct: 68 TLKKGESLFINSEEMHFMRMDAREE-----CRIISFVFDKVLICGEKGSKIDQKYIIPLI 122 Query: 119 AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN---------FKNAY 169 ELS + ++SQ + F+Y IL YE N Sbjct: 123 NC-----------KELSALELTEEDSQ-KLIQGYFSYADEILGYEIVIRNVLSEILLNIV 170 Query: 170 RSEQGYIKKD--------VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEY 221 R Q ++K +K +L +++ NY E I+L ++K+ F + Sbjct: 171 RENQELLEKSNGSNNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTI 230 Query: 222 RISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 SPI Y+ + R+ A L +EL EI + G+ + +F+K+F R +G +P +YR+ Sbjct: 231 GTSPIEYLQKYRIYTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRK 289 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 21/261 (8%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 DP + S + NE L YV KG D Y +D +I + +D +DP Sbjct: 35 DP-YHSYGPISRNEYLLHYVIKGKGILKADGKTYHIGENDAFLIYPSEITYYEADKDDPW 93 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK------EVIKTLFNELSVILPQSKN 143 T GF AE SC + A+ + E +TL + L+ +L SK Sbjct: 94 TYIWI---GFDGMKAE--------SCLINASFSKENRVSKFECGETLVHYLNGMLSASKL 142 Query: 144 SQTSSL-WDAFAYTL--AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLE 200 + ++ L + + Y A++ + N+ + E V ++ L ++++NY ++I + Sbjct: 143 TYSNDLKREGYLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVI 202 Query: 201 QLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENV 260 +++ + SY+ F K ++SP Y+++ R+ +A L NT+L EI+ VGY N Sbjct: 203 DIAEYIGINRSYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNA 262 Query: 261 DHFAKLFLRHVGCSPSDYRRQ 281 F+K+F + SP YR Q Sbjct: 263 LTFSKVFKNYYKMSPKTYRTQ 283 >UniRef50_UPI0001C362BB response regulator receiver protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C362BB Length = 482 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 65/105 (61%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 ++ +++ Y+ N+Y+E I L L+ +F S +Y+ +F++ +S ++Y+ R+ A Sbjct: 378 IVDNVIRYIKNHYKEDINLNVLANEFFLSPAYLSRKFSQTTGVSIMSYLEDYRINVATDL 437 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 L +E S +EI+ +VGY + ++F K+F + G +P ++R+ K+C Sbjct: 438 LKGSERSISEIADQVGYYDANYFTKIFKKVKGITPKEFRKMSKSC 482 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 27/277 (9%) Query: 27 FSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS 83 +SD K+ +G H H+ E E+I VK G +D+S +V + D V I LH + + Sbjct: 31 YSDINKFVTGDISWHWHE-EIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNILHYIRA 89 Query: 84 DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLF-------NELSV 136 ++ + G ++ Q P++ + K + F E S Sbjct: 90 GTSEECILNSLVFNKNLISGGVQSVFEQNFVNPIV---ENKNLSGIAFYKNTSWGEEASA 146 Query: 137 ILPQSKNSQTSSLWDAFAYTLAI------LYYENFKNAYRSEQGYIKKDVL----IKDIL 186 + KN+ + F Y + + ++Y KN ++ L IK+IL Sbjct: 147 CI---KNAFSQFEKSEFGYEILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNIL 203 Query: 187 FYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTEL 246 +++ NY ++ITL ++K S F ISPI Y+++ R++ A L + Sbjct: 204 SFVHKNYNKQITLNDIAKVVNLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKD 263 Query: 247 SQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 IS VG+++ +F+K+F R +G +P+ YR + K Sbjct: 264 PITIISDAVGFDSPSYFSKIFKRFIGITPTQYRNKSK 300 >UniRef50_C6CRE4 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CRE4_PAESJ Length = 267 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 57/91 (62%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 YL ++YRE + +EQL + S +Y F + + SPI Y+ Q R+ EA L +++++ Sbjct: 163 YLLDHYREHVEIEQLGELIHRSPNYTTALFKEVFGQSPIRYMHQLRLLEACRLLLHSDMT 222 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 A+I+ +GY + +F ++F +HVG SPS++ Sbjct: 223 VADIAQYLGYYDPSYFFRMFKKHVGLSPSEF 253 >UniRef50_C6CT66 Two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CT66_PAESJ Length = 262 Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 56/104 (53%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K+ + YL + E +T+ ++ + SY F ++ ++ +Y+ +RR+ AK L Sbjct: 154 VKEAIQYLEEHLHEPVTMRDIADHLHMNASYFSVLFKEQTGLTFSDYLTRRRVQRAKELL 213 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 TNT LS EI+ + GY+ +F K+F H G SP YR+ + Sbjct: 214 TNTRLSINEIAEKAGYQTAKYFVKVFRSHEGVSPGQYRKNVSHA 257 >UniRef50_B9DSF4 AraC family regulatory protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DSF4_STRU0 Length = 387 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 1/99 (1%) Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 + IL Y++ N +K+ +E ++K+F S S I F KE S Y+ +++M EAK L Sbjct: 283 VAKILRYIHQNLSQKLMVEDIAKQFNFSESTIRKLFRKEMNCSLQQYISRKKMEEAKVML 342 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 N + E+S +GY ++ HF++ F HVG SP Y+R Sbjct: 343 RNQN-NVTEVSNSLGYADLAHFSRTFKAHVGLSPKQYQR 380 >UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XGU9_CALS8 Length = 304 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 38/291 (13%) Query: 21 RLSRFA--FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 R +FA F +DP++ H N E +YV KG I+S Y ++ ++ Sbjct: 19 RPQKFALNFWEDPRYFKLHR--HNFVEFMYVVKGEGTEHINSISYSLKPGTFSIVMPYQI 76 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEE-----NQLLQPHSCPVIA----AGQGKEVIKT 129 H + +P + A+ + QLL + V+ G+ KE++ + Sbjct: 77 HRIEYSEQNPLSIYVVAISFEELLAPSSIFYRIGQLLLNYDENVLPYYYFEGKEKEMMDS 136 Query: 130 LFNELSVILPQSKNSQTSSLWDAFAYTLAIL----YYENFKN---------------AYR 170 LF E + Q +W IL Y++ +N R Sbjct: 137 LFEEAWIYFNQQ------DVWAEIILKAKILEIVAYFDRCRNLACEKNFQSPASNFVTNR 190 Query: 171 SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 +++ I +++Y++ NY + I L+ LSK+F S SYI F K + N++I Sbjct: 191 AQKESIPVPTDYWQLVYYVHKNYNQNIDLKTLSKEFHLSPSYISQLFKKLVGSNFHNFLI 250 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 + R+ A L +T+ +I+ VG+++ FA++F +H G S ++R++ Sbjct: 251 EVRLQHACSLLLSTDKPVTDIALEVGFDSYSTFARVFHKHKGMSALEFRKR 301 >UniRef50_B9XJS0 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514 RepID=B9XJS0_9BACT Length = 337 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 54/92 (58%) Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+ + E I++EQL++ S S+ H F + ++P+ +V ++R+T A+ + T S Sbjct: 243 YVTGHLAEAISIEQLAELVELSSSHFAHVFKESTGMTPLQFVTRQRVTRAQQLIRETSRS 302 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 +I VGY + HFA++F R VG +P+ +R Sbjct: 303 LIDIGLEVGYTSPSHFAQVFRRVVGVTPNQFR 334 >UniRef50_C4ZGL1 Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGL1_EUBR3 Length = 531 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 9/118 (7%) Query: 166 KNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISP 225 KN R G ++K+V +NY ITL+ LS+K+ + +Y+ F K+Y S Sbjct: 420 KNVSRGVIGMVEKEV---------RDNYATNITLKSLSEKYYVNSAYLGQLFRKKYGQSF 470 Query: 226 INYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +Y+ RM A L T+ +I+ VGY ++D+F F++ GC+P+ +RRQ + Sbjct: 471 KDYLNNYRMERAAELLLRTDKKIIQIAEEVGYHDMDYFVNRFIQVKGCTPARFRRQMQ 528 >UniRef50_B1BZ28 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B1BZ28_9FIRM Length = 432 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 65/105 (61%) Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 +D L+++IL Y+N+ E +T+E++ KF S S + F ISP NY++Q ++ ++ Sbjct: 326 QDGLLQEILDYMNSMITEPLTIEEICHKFSISRSSLQTLFRNNLEISPKNYMVQIKLKKS 385 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 K + + + +EI++ +G+ ++ +F++ F +H +PS+Y ++ Sbjct: 386 KELIRENKYTISEIAFMLGFSSIHYFSRTFKQHFNLTPSEYAKKL 430 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 63/102 (61%) Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LI++ + Y+ NY +++T+++++ +F + F + +SPI+Y+I+ R+++AK Sbjct: 170 LIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYLFKRHTGMSPIHYLIECRISKAKEL 229 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L + S +++ VGY + +F+K F ++ G SPS+YR F Sbjct: 230 LGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPSEYREGF 271 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 17/265 (6%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH--AVASDVND 87 +P E+ H HD EL YV G +L A D+ +I LH A+D D Sbjct: 26 EPSLEAKLHRHD-AWELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLHRWEYAADSAD 84 Query: 88 PATTCTCALYGFQFQGAEENQLLQPH--------SCPVIAAGQGKEVIKTLFNELSVILP 139 + F+ E + + P P A G E ++ + LS + Sbjct: 85 EDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPESVRVIRKTLSEMNG 144 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL-IKDILFYLNNNYREKIT 198 + + S++ + L + + + + + + I+K+V ++ I Y+ +Y I Sbjct: 145 MDELGRLSAM-----FRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQICAYVMKHYVHSIA 199 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L+ ++ + + S C F + ++ +V Q R+ A L +++ +EI + VG+ Sbjct: 200 LDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKGVSEICYLVGFN 259 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQFK 283 ++ HF ++F +G PS YR+QFK Sbjct: 260 DLPHFVRVFTSTMGMPPSKYRKQFK 284 >UniRef50_D2THV7 AraC-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=D2THV7_CITRO Length = 284 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 60/107 (56%) Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 + + L I ++ +NY ++ E ++ F + +++ FT+ +S ++YV RM + Sbjct: 178 RAEFLYHSICNWVQDNYARPLSRESVATFFNITPNHLSRLFTRHGTMSFVDYVRWVRMAK 237 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 A+ L LS E++ R GYE+ D+F +LF R G +P +YR +F+ Sbjct: 238 ARMILQKYHLSVNEVAQRCGYEDSDYFCRLFRRQFGLTPGEYRARFQ 284 >UniRef50_Q24RE3 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q24RE3_DESHY Length = 291 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 11/159 (6%) Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL--------- 181 F E+ +L Q KN + + + Y + E +G+++ L Sbjct: 132 FPEMVRLLDQVKNYRGNGIAAKLFYEGKVA--EAVSLVVERHKGHLQSTKLQLADRDRKQ 189 Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I+ + Y+N++Y ++ LEQL+K + + F + + Y+ QRRM++A++ L Sbjct: 190 IETVTAYINDHYPCELPLEQLAKIACMGTTKLKTSFRIVHDCTITEYIQQRRMSQAQYLL 249 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + T+L+ +++ VGY++ FA+LF ++ G P +YR+ Sbjct: 250 SGTDLTIGQVAQTVGYKSASRFAELFKKNTGLQPGEYRK 288 >UniRef50_A3IBD0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3IBD0_9BACI Length = 640 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 71/130 (54%), Gaps = 1/130 (0%) Query: 162 YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEY 221 YE + + IK D+ + + + Y+ +Y+ +TLE+L+++ SV Y+ F ++ Sbjct: 141 YELLRQMHAQRIHPIKPDI-VTEAVRYIEEHYQRPLTLEKLAQELSCSVGYLSKLFKEKM 199 Query: 222 RISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 SPI+Y+ R+ +A L T+ + +I+ VGY + ++ F RH G SP+ ++R Sbjct: 200 HTSPIHYLGVIRINKAAKLLVQTDATLQDIADHVGYPDGYSLSRSFKRHKGISPAQFKRA 259 Query: 282 FKNCFAEQEI 291 +K ++E+ Sbjct: 260 WKQKSEDEEL 269 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 27/256 (10%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 G H H TE ++V +G R ++ Y D++ I HA + +D C Sbjct: 26 GLHRH-QATEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASDDNLVLC--- 81 Query: 96 LYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP--------QSKNSQTS 147 Q + E + +A G V+K N+L L Q + Q + Sbjct: 82 ---LQHRFEELVNV-------SVAPGTSNPVLKARLNDLRTTLAHLWWEQKYQPAHWQLA 131 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV--LIKDILFYLNNNYREKITLEQLSKK 205 + L +L Y + + +E + D I+ I YL +YRE I+L LS+ Sbjct: 132 TENGLAQLQLILLRYFSSASPAPAES---RDDASWRIQQITRYLEAHYREPISLTSLSEH 188 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 F S +Y+ H F + + + ++ Q R+ L T+ + AE++ G+ ++ F Sbjct: 189 FGLSETYLSHYFKDKTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNS 248 Query: 266 LFLRHVGCSPSDYRRQ 281 F R C+PS++R+Q Sbjct: 249 AFKREYQCTPSEFRQQ 264 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 29/250 (11%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G + I +D +IE G H A+ + P ++Y F G + Sbjct: 60 LIYCHEGEGWYNIGKGKCTVKKNDFFIIEAGTPHVYAASTSHP-----WSIYWIHFTGEQ 114 Query: 106 E-------NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ-----TSSLWDAF 153 N+ + P + LFNE+ V L + + T LW Sbjct: 115 SHLFSELFNRTIYIDDSPTARFNDRIQ----LFNEILVNLEMGYSIENLEYITLCLWYLL 170 Query: 154 AYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYI 213 + Y F+ + K I+ ++ Y+ N +++TLE +++ S +Y+ Sbjct: 171 G---SFRYIPQFREINKP-----KTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYL 222 Query: 214 CHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGC 273 FT++ +SPINY Q ++ +A L T+ EI++ + + + +F+K+F +++ Sbjct: 223 STLFTQKSGMSPINYFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHM 282 Query: 274 SPSDYRRQFK 283 SP +YR + K Sbjct: 283 SPKEYRMKKK 292 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77402 Uncharacterized HTH-type transcriptional regulat... 408 e-112 UniRef50_B4TGJ3 Transcriptional regulator, AraC family protein n... 340 3e-92 UniRef50_Q32FK5 Putative ARAC-type regulatory protein n=5 Tax=En... 240 5e-62 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 230 3e-59 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 227 3e-58 UniRef50_B0MDV1 Putative uncharacterized protein n=1 Tax=Anaeros... 224 3e-57 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 221 3e-56 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 219 8e-56 UniRef50_B1QZ26 Putative transcription regulator, AraC family n=... 218 1e-55 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 217 3e-55 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 215 2e-54 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 215 2e-54 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 212 1e-53 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 212 1e-53 UniRef50_B5FJ85 Transcriptional regulator, AraC family protein n... 212 2e-53 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 211 2e-53 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 210 4e-53 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 210 4e-53 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 208 3e-52 UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing... 207 5e-52 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 206 1e-51 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 205 2e-51 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 204 2e-51 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 204 3e-51 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 204 4e-51 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 203 4e-51 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 203 6e-51 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 203 6e-51 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 202 1e-50 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 202 1e-50 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 202 2e-50 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 201 3e-50 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 200 4e-50 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 200 4e-50 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 200 6e-50 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 199 8e-50 UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=P... 199 8e-50 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 199 8e-50 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 199 9e-50 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 199 1e-49 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 198 1e-49 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 198 2e-49 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 198 2e-49 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 197 4e-49 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 196 8e-49 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 196 1e-48 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 196 1e-48 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 196 1e-48 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 195 2e-48 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 195 2e-48 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 195 2e-48 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 194 3e-48 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 194 4e-48 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 193 7e-48 UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales ... 193 7e-48 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 192 1e-47 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 192 1e-47 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 192 1e-47 UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1... 192 1e-47 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 191 2e-47 UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 T... 191 2e-47 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 191 2e-47 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 191 2e-47 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 191 3e-47 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 191 3e-47 UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium R... 191 3e-47 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 191 3e-47 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 191 3e-47 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 190 4e-47 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 190 5e-47 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 190 5e-47 UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Ba... 190 5e-47 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 190 6e-47 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 190 6e-47 UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=C... 190 6e-47 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 190 7e-47 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 189 9e-47 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 189 9e-47 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 189 1e-46 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 189 1e-46 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 188 2e-46 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 188 2e-46 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 188 2e-46 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 188 3e-46 UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr... 187 3e-46 UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 T... 187 4e-46 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 187 4e-46 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 186 6e-46 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 186 8e-46 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 186 9e-46 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 186 1e-45 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 186 1e-45 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 185 1e-45 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 185 1e-45 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 185 2e-45 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 185 2e-45 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 185 2e-45 UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D2... 185 2e-45 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 184 3e-45 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 184 3e-45 UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=L... 184 3e-45 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 183 4e-45 UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales... 183 6e-45 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 183 6e-45 UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 ... 183 7e-45 UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides Re... 183 7e-45 UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=C... 183 8e-45 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 183 9e-45 UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=S... 183 1e-44 UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales ... 181 2e-44 UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonel... 181 2e-44 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 181 2e-44 UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bactero... 181 2e-44 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 181 3e-44 UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C... 181 3e-44 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 181 3e-44 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 180 4e-44 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 180 6e-44 UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostri... 180 6e-44 UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/Xyl... 180 7e-44 UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=T... 180 8e-44 UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostri... 180 8e-44 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 180 8e-44 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 179 8e-44 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 179 9e-44 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 179 1e-43 UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostri... 179 1e-43 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 179 1e-43 UniRef50_C2D033 AraC family transcriptional regulator n=1 Tax=La... 179 1e-43 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 178 2e-43 UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyri... 178 2e-43 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 178 2e-43 UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C... 178 2e-43 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 178 2e-43 UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=C... 178 2e-43 UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabin... 178 3e-43 UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=C... 178 3e-43 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 178 3e-43 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 177 3e-43 UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=B... 177 4e-43 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 176 6e-43 UniRef50_UPI0001789626 transcriptional regulator, AraC family n=... 176 6e-43 UniRef50_C9KIY1 Transcriptional regulator, AraC family n=1 Tax=M... 176 6e-43 UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevi... 176 7e-43 UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=C... 176 7e-43 UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax... 176 7e-43 UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family prot... 176 7e-43 UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=u... 176 8e-43 UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostri... 176 1e-42 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 176 1e-42 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 176 1e-42 UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostri... 176 1e-42 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 175 1e-42 UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminoc... 175 2e-42 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 175 2e-42 UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopi... 175 2e-42 UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bactero... 175 2e-42 UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostri... 175 2e-42 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 175 3e-42 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 174 3e-42 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 174 3e-42 UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P... 174 4e-42 UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=C... 174 4e-42 UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=P... 174 4e-42 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 174 4e-42 UniRef50_C2BII1 AraC family transcriptional regulator n=3 Tax=An... 173 5e-42 UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L... 173 5e-42 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 173 5e-42 UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta... 173 5e-42 UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacte... 173 6e-42 UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ... 173 7e-42 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 173 7e-42 UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ... 172 1e-41 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 172 1e-41 UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=C... 172 1e-41 UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=B... 172 2e-41 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 171 2e-41 Sequences not found previously or not previously below threshold: UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 205 2e-51 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 191 2e-47 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 190 7e-47 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 187 4e-46 UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Ba... 187 4e-46 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 187 5e-46 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 186 5e-46 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 186 7e-46 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 186 1e-45 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 185 1e-45 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 185 2e-45 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 184 3e-45 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 184 4e-45 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 184 4e-45 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 183 5e-45 UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami... 182 1e-44 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 182 2e-44 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 182 2e-44 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 181 3e-44 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 181 3e-44 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 180 4e-44 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 180 6e-44 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 180 8e-44 UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostri... 180 8e-44 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 179 9e-44 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 179 9e-44 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 179 1e-43 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 179 1e-43 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 179 1e-43 UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C... 179 1e-43 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 179 1e-43 UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=P... 178 1e-43 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 178 2e-43 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 178 2e-43 UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=P... 178 2e-43 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 178 2e-43 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 178 2e-43 UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=b... 178 3e-43 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 178 3e-43 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 177 4e-43 UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H... 177 4e-43 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 177 4e-43 UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminoc... 177 5e-43 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 176 8e-43 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 176 8e-43 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 176 9e-43 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 176 1e-42 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 175 1e-42 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 175 1e-42 UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostri... 175 2e-42 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 175 2e-42 UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 174 3e-42 UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=M... 174 3e-42 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 174 4e-42 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 174 4e-42 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 174 4e-42 UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s... 174 4e-42 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 174 4e-42 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 174 4e-42 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 173 5e-42 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 173 5e-42 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 173 7e-42 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 173 7e-42 UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1... 173 9e-42 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 173 1e-41 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 172 1e-41 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 172 1e-41 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 172 1e-41 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 172 1e-41 UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=C... 172 1e-41 UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=... 171 2e-41 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 171 2e-41 >UniRef50_P77402 Uncharacterized HTH-type transcriptional regulator ydiP n=52 Tax=Enterobacteriaceae RepID=YDIP_ECOLI Length = 303 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS Sbjct: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA Sbjct: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV Sbjct: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS Sbjct: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS 300 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS Sbjct: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS 300 Query: 301 LVG 303 LVG Sbjct: 301 LVG 303 >UniRef50_B4TGJ3 Transcriptional regulator, AraC family protein n=28 Tax=Enterobacteriaceae RepID=B4TGJ3_SALHS Length = 296 Score = 340 bits (873), Expect = 3e-92, Method: Composition-based stats. Identities = 234/292 (80%), Positives = 254/292 (86%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFD+A+ET+F KTPR SRF SDDP WESGHH+HDNETELIYVKKG+AR IDS Sbjct: 1 MYQRCFDSAAETIFEQDKTPRFSRFVISDDPNWESGHHMHDNETELIYVKKGIARLIIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVV+ERGRLHAVASD N PATT TCALYGF F G EENQLLQ HSCPV++ Sbjct: 61 SLYVAHADDIVVVERGRLHAVASDSNSPATTYTCALYGFCFPGWEENQLLQSHSCPVVSV 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 QGKEVIK++FNELSV+LPQ KN SS++DAFAYTL LYYENFKNAYRSEQGYIKKDV Sbjct: 121 VQGKEVIKSIFNELSVLLPQGKNVLASSVYDAFAYTLTALYYENFKNAYRSEQGYIKKDV 180 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LIKD+L YLNNNYREKITL+QLSKKFRASVSYICHEF KEY I PINYVIQRRMTEAK++ Sbjct: 181 LIKDVLVYLNNNYREKITLDQLSKKFRASVSYICHEFAKEYHIFPINYVIQRRMTEAKFA 240 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEIL 292 LTNTE AEISWRVGYENVDHFAKLF+RHVGC P+DYR+QFKN Q L Sbjct: 241 LTNTESPLAEISWRVGYENVDHFAKLFMRHVGCYPNDYRKQFKNSLVAQAYL 292 >UniRef50_Q32FK5 Putative ARAC-type regulatory protein n=5 Tax=Enterobacteriaceae RepID=Q32FK5_SHIDS Length = 180 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 178/179 (99%), Positives = 178/179 (99%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFDNASETLFVAGKTPRLSRFAFSD PKWESGHHVHDNETELIYVKKGVARFTIDS Sbjct: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDAPKWESGHHVHDNETELIYVKKGVARFTIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA Sbjct: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD 179 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD Sbjct: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD 179 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 9/263 (3%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +S+ F D W S H H TEL Y G +F + L+ DD+V++ H Sbjct: 23 ISKSRFGGD--WNSTTHTHSC-TELFYCLSGEGQFYLAGQLFPVKPDDMVIVNPQVEHTE 79 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 S P + +F ++ + + + + +E + TL + L +S Sbjct: 80 LSLNASPLEYIVLGVASMEFLFSKADT-----NYAIFNCRENRERMVTLLHMLLAEADRS 134 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + D L I + + E+ ++ +I YL+ NYRE I+L+ Sbjct: 135 LDGCETVCQD-LLEVLLIWLVRCTTISLQLEEAAPTENRECAEIKRYLDTNYREDISLDL 193 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L++ + Y+ H F +EY ISPI Y+ +RR+ E+K L NT S A+IS +G+ + Sbjct: 194 LAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHMLGNTGYSLAQISELMGFSSPS 253 Query: 262 HFAKLFLRHVGCSPSDYRRQFKN 284 +F++ F + G +P++YRRQ + Sbjct: 254 YFSQCFRKAEGMTPNEYRRQTRQ 276 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 9/263 (3%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +S+ F D W S H H TEL Y G +F + L+ DD+V++ H Sbjct: 54 ISKSRFGGD--WNSTVHTHSC-TELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQVEHTE 110 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 S P + G + + + + + +E + TL + L +S Sbjct: 111 LSLNASPLEYIVLGVSGIEILFGKADSTYA-----IFNCRENRERMVTLLHMLLAEADRS 165 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + D L I + + E+ + +I YL+NNYRE+I+L+ Sbjct: 166 LDGCETVCQD-LLEVLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREEISLDT 224 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L++ + Y+ H F K Y ISPI Y+ +RR+ E+K+ L NT S A+IS +G+ + Sbjct: 225 LAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMGFSSPS 284 Query: 262 HFAKLFLRHVGCSPSDYRRQFKN 284 +F++ F + G +P++YRRQ + Sbjct: 285 YFSQCFRKAEGLTPNEYRRQVRQ 307 >UniRef50_B0MDV1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDV1_9FIRM Length = 290 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 98/279 (35%), Positives = 166/279 (59%), Gaps = 5/279 (1%) Query: 12 TLFVAGKTPRLSRFAFS-DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 +F +P++ R + S ++P W +H+H NETEL+Y+ KG + I+++ Y I Sbjct: 13 PIFEPDHSPKICRLSHSYNNPTWNYQYHLHKNETELVYISKGSGTYVINTNSYQLKKGMI 72 Query: 71 VVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHS-CPVIAAGQGKEVIKT 129 +++E+G +H++ SD +DP TCA+ ++ ++ + P + CP + +G + I Sbjct: 73 LIVEQGAIHSLFSDEHDPLNCWTCAISDYKLCCRSDHGFMLPANVCPAMDSGIHENYIHR 132 Query: 130 LFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYL 189 LF EL ++ S ++ ++ DA A +LA +Y+E F ++E+ K +DIL Y+ Sbjct: 133 LFEELDLLRKFSSDTHMAA-CDALAVSLASIYFELFLADPKTERH--KDSSFARDILIYI 189 Query: 190 NNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQA 249 N NY +ITL++L+++F S +I HEF+K Y ISPINYVI RR+ EAKW L NT S Sbjct: 190 NENYASQITLKKLAEQFHISTDHISHEFSKVYGISPINYVIDRRLNEAKWMLINTSDSLV 249 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 I+ ++GYEN +HF+KLF + + P +R +++ + Sbjct: 250 SIAKKIGYENTNHFSKLFQKRMQYPPLKFRELYQHKKST 288 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 110/253 (43%), Gaps = 6/253 (2%) Query: 27 FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVN 86 D P W + H HD E++YV G ++ + D+VV+ G LH SD Sbjct: 27 LEDAPNWFNIQHSHD-FCEILYVAGGAGEAILEGKKFRLAPGDLVVVNPGTLHEERSDAK 85 Query: 87 DPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 P A+ F G L Q V++ G+ + + EL S+ Sbjct: 86 APLRLIFLAIRDFAVPGLPAGCLSQ-EKYRVLSCGEYRYKMDIYLRELLQETS-SQIEFY 143 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + L +L + E ++ + I YL+ N+ ITL+ LS+ Sbjct: 144 QEISQGLVSALLVLVMRLIRINPEDEAALSQEC---QKIKEYLDQNFTSPITLDSLSETV 200 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S Y+ H F ++ +SPI Y+ +RM +A L+ TEL +E+S VGYEN +F+++ Sbjct: 201 YISKHYLSHLFKEQTGVSPIKYLTSKRMEKACELLSETELPVSEVSKAVGYENPLYFSQV 260 Query: 267 FLRHVGCSPSDYR 279 F R G SP YR Sbjct: 261 FKRIYGISPVKYR 273 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 219 bits (559), Expect = 8e-56, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 8/257 (3%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 + D W S H H +EL +V KG F I+ +D+++I H + Sbjct: 27 TSDKDWHSMEHSH-YFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTEFGNKEQ 85 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIA-AGQGKEVIKTLFNELSVILPQSKNSQT 146 P + G QFQ +E+ P+S V + + + +E+ L + I Q + QT Sbjct: 86 PWEYIALGIEGVQFQYSEKE---APYSYSVFSLSREHREIPWYLSTLVKEIQTQQEGYQT 142 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 L++ + Q ++ L++ Y+N +Y E ITL+ LS Sbjct: 143 ICQNLLELILLSVARSTRQEFLSAPRQKTTRECRLVEQ---YINEHYHEDITLDTLSALV 199 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 + Y+ H F +SPINY+IQRR+ EA++ L +T S +I G+ + +F++ Sbjct: 200 HINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQT 259 Query: 267 FLRHVGCSPSDYRRQFK 283 F R G +P+ YR++ K Sbjct: 260 FRRLTGTTPNAYRKKKK 276 >UniRef50_B1QZ26 Putative transcription regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1QZ26_CLOBU Length = 344 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 91/282 (32%), Positives = 148/282 (52%), Gaps = 5/282 (1%) Query: 1 MYQRCFDNASETLFVAGKTPRLSR-FAFSDDPKWESGHHVHDNETELIYVKKGVARFTID 59 M+ F+ S+ +F P+L R F + P W +H+H N TE++Y+ G A +TID Sbjct: 1 MFSFSFNKKSQDIFKDKHYPKLRRIFHNYNTPDWTYNYHLHKNSTEIVYIANGKATYTID 60 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG-AEENQLLQPHSCPVI 118 ++ ++++E+G LH+++SD P T + + G +E N+LL + +I Sbjct: 61 METFILEKGHLLIMEKGVLHSISSDTEKPVDAWTIIIDDYTINGFSESNRLLNSSTYAII 120 Query: 119 AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 G +IK++ E+ + + ++++Y + E+ KK Sbjct: 121 KTGIHDLLIKSIMEEIRTLCIDETLISQFTCNMLATSLVSLIYGLLPEENLSIEK---KK 177 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 ++DIL Y++ +Y E ITL++LS F S +I H FTKEY +SPINY I R+ EAK Sbjct: 178 SSFVRDILVYISEHYNEPITLKKLSDVFHVSAGHISHAFTKEYTVSPINYAIDLRICEAK 237 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L NT+ S IS +VGY N+ HF+ +F V CSP ++R Sbjct: 238 LLLLNTDESLTSISNKVGYTNISHFSNIFTSRVNCSPLEFRE 279 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 134/271 (49%), Gaps = 7/271 (2%) Query: 20 PRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 PRL+ F + H H+N EL ++ G + + + DI++ + +H Sbjct: 19 PRLTGFYHWNRSI--RTMHQHENCIELNFMISGNGTHIVGNEICHTQPGDIIIYDSKVMH 76 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 + ++ C A+ G + GA N LL P P I + + TL++ + L Sbjct: 77 DESLMLDSLTDACCIAVTGLKRPGARPNALLPPGLHPCIPCQSIAQELCTLYHIIERSLA 136 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 + + +A A T+ L ++ R+ + ++++L++ + Y+ +Y E +++ Sbjct: 137 KPHGYPAA---NAAAQTIVHLVWQQISE--RAVRAAGQENMLMERVRSYIEQHYAEALSI 191 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 ++++F AS YI H F +P+ Y+ + R+ +A+ L +T+LS E++ RVG+++ Sbjct: 192 RDIAQEFHASRDYIAHAFKHTTNYAPLQYLRRWRIGKAQTLLIDTDLSLTEVASRVGFDD 251 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFKNCFAEQE 290 ++F+++F + +G P +RR ++ +Q+ Sbjct: 252 PNYFSRVFRQVIGMPPGTFRRTWRAAQRKQQ 282 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 7/253 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H++ E+I V G F ID+ Y+A D++ + G LH + D AT+C + Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLATSC-LGV 59 Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYT 156 FQ G N+++ P ++ + ++TLF+ + + + D T Sbjct: 60 SDFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFH---TAVQLALAGDAPCVLDQL--T 114 Query: 157 LAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 AIL + + A + +++ L + Y++ +YRE ITL+ ++ + + Y+ H Sbjct: 115 CAILCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHA 174 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 F + SP+ Y+I+RR+ EA+ L T+ S EI++ GY N ++F +F R VG +P Sbjct: 175 FREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPG 234 Query: 277 DYRRQF-KNCFAE 288 YRR + +N + Sbjct: 235 QYRRDWVQNALPQ 247 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 17/288 (5%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSS 61 Y + + + T+F A K R A +H H + TEL Y+ G +++ ID Sbjct: 6 YDLTYSDFNPTVFFASKMRVTKRTA----------YHAHQDFTELTYILSGTSKYRIDDI 55 Query: 62 LYVAHADDIVVIERGRLHA-VASDVNDPATTCTCALYGFQFQGAEENQL-LQPHSCPVIA 119 Y A D++V G H + D +P FQF+ EN + L V Sbjct: 56 YYDVKAGDMIVCNPGVFHQNMLLDGEEPLVEFCTGFTDFQFKNMPENTIQLSNQGHIVHL 115 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG----Y 175 + + K L ++ + + L L +L E + +++G Sbjct: 116 SSEAKRETSRLCYDMLAENEAGQVGKYFMLKAQLIQMLMLLMREVIEAPKVTQKGCNFET 175 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 K +K I+ YL NY KI+L+Q++ S YI F +E SPINY+I+ R+ Sbjct: 176 YSKSYAVKRIINYLMENYEHKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLE 235 Query: 236 EAKWSLTNTE-LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +AK L+ E S I+ +GY++V HF+KLF ++ G SP +YR+ Sbjct: 236 KAKEILSEREGGSIKNIANEIGYDDVYHFSKLFKKYFGISPQNYRKSL 283 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 11/294 (3%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLY 63 D +E L V G FSD K+ +G H H E E+I + KG I++ + Sbjct: 9 DKNNEELAVHGNYEFPCAVYFSDVSKYTAGEIAWHWH-KEIEIITIYKGTLYIEIENKKF 67 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ- 122 + + I +H + D + + G + +++ Q + P+I + Sbjct: 68 TLKKGESLFINSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLINCKEL 127 Query: 123 -----GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 +E + L + + + + L + EN + +S Sbjct: 128 SALELTEEDSQKLIQGYFSYADEIL-GYEIVIRNVLSEILLNIVRENQELLEKSNGSNNT 186 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 +K +L +++ NY E I+L ++K+ F + SPI Y+ + R+ A Sbjct: 187 DRERMKYMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYLQKYRIYTA 246 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEI 291 L +EL EI + G+ + +F+K+F R +G +P +YR+ N + +I Sbjct: 247 AELLRKSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKNKLNLDIKNKI 300 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 12/257 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E EL+ V +G A F +D Y A + + + G LH+ P + + Sbjct: 36 HWHD-ELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVFH 94 Query: 98 GFQFQGAEENQLLQPHSCPVI--------AAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 F + L + PV+ + L L I +N Q +S Sbjct: 95 SSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAASE 154 Query: 150 WDAFAYTLAIL--YYENFKNAYRSEQGYIKKDV-LIKDILFYLNNNYREKITLEQLSKKF 206 +IL K + R + + +K ++ Y+ NY E I L++L++ Sbjct: 155 LTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAELA 214 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 R S SY C F + SPI Y+ R+ +A L T+ E++ VG+ ++ +F + Sbjct: 215 RMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNTV 274 Query: 267 FLRHVGCSPSDYRRQFK 283 F + GC+P +YR + + Sbjct: 275 FRQRFGCTPREYRSRLQ 291 >UniRef50_B5FJ85 Transcriptional regulator, AraC family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 RepID=B5FJ85_SALDC Length = 194 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 147/181 (81%), Positives = 161/181 (88%) Query: 112 PHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRS 171 HSCPV++ QGKEVIK++FNELSV+LPQ KN SS++DAFAYTL LYYENFKNAYRS Sbjct: 10 SHSCPVVSVVQGKEVIKSIFNELSVLLPQGKNVLASSVYDAFAYTLTALYYENFKNAYRS 69 Query: 172 EQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 EQGYIKKDVLIKD+L YLNNNYREKITL+QLSKKFRASVSYICHEF KEY ISPINYVIQ Sbjct: 70 EQGYIKKDVLIKDVLVYLNNNYREKITLDQLSKKFRASVSYICHEFAKEYHISPINYVIQ 129 Query: 232 RRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEI 291 RRMTEAK++LTNTE AEISWRVGYENVDHFAKLF+RHVGCSP+DYR+QFKN EQ Sbjct: 130 RRMTEAKFALTNTESPLAEISWRVGYENVDHFAKLFMRHVGCSPNDYRKQFKNSLVEQAY 189 Query: 292 L 292 L Sbjct: 190 L 190 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 4/257 (1%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 SD P W H HD+ E+I V G FTI Y A DI+V +G LH S +++ Sbjct: 21 SDTPNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYNKGVLHEEQSSIDN 80 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 P T C + E+ ++ P PVI + + I+ L + ++ Sbjct: 81 PLITYYCGFSLPK-ASPSEDWVIPPDVEPVIRSSRVFPEIEALMKMIVDESSIKEDGYEG 139 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + ++ +L +N +Q L + I Y++ N+ + I+L+ L ++F Sbjct: 140 -ISRYLINSVILLLRRAVRNQQHIKQE--SNTGLAEQIKDYIDRNFTQNISLKDLGRQFH 196 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + YI H F YRISPINY I RR+ EA L TE+ E++ +GY+N ++F+ +F Sbjct: 197 VNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLGYDNPNYFSIIF 256 Query: 268 LRHVGCSPSDYRRQFKN 284 R G SP+ +R + Sbjct: 257 RRVTGLSPNRFRESNQQ 273 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 25/293 (8%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 ++ D + T K RL K E+ +H HD E+ ++ G ++ I L Sbjct: 7 EQLLDQLNPTFLFTWKGTRL---------KDEARYHSHD-FIEMAFILSGHGKYKIADRL 56 Query: 63 YVAHADDIVVIERGRLH-AVASDVNDPATTCTCALYGFQFQGAEENQLLQPH-------- 113 Y DI+++ G+ H A+ +D ++PAT L +F EN L Sbjct: 57 YDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDPA 116 Query: 114 -SCPVIA-AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRS 171 P++ +G+ ++ + + +SV ++ + L L +L E + + Sbjct: 117 TQSPILHTSGELRQKLFKICTAMSVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKIN 176 Query: 172 ---EQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 K ++ I+ Y ++Y EKI+L+Q+++ S YI F E +PI + Sbjct: 177 TGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIRH 236 Query: 229 VIQRRMTEAKWSLTNT-ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +I R+ +AK L N + S E++ +VGY++V HF+KLF + G PS RR Sbjct: 237 LINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 8/261 (3%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 L + W S H H TEL +V G F ++ + D++VI H Sbjct: 21 LYSTYSKYEEDWSSYPHTH-YFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTE 79 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 S + DP + G F + N+ L + + + K+ + F + S Sbjct: 80 KSSLEDPLEYIVLGVDGLNFVIDDANEYL------LFHSDEMKDRLDFYFRTILEETENS 133 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + L + ++ + + Y+++++RE ITL++ Sbjct: 134 QKDYE-KVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDK 192 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L++ + + Y H FT+ Y ISP+NY+ Q+R+ ++ LT+T++S A+I+ + G+ + Sbjct: 193 LAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSS 252 Query: 262 HFAKLFLRHVGCSPSDYRRQF 282 +F + F + G +P+ YR+QF Sbjct: 253 YFTQCFRKSCGMTPTAYRKQF 273 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 6/277 (2%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESG--HHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + +F + PRL ++ P H H + E I + +G ID Y Sbjct: 9 KPVFTSEAMPRLVTLYRAETPYTSMPRTMHRHGDVAEFILITEGSGIHIIDGQRYYTQKG 68 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIK 128 D+++I + +H +S N + + A+ G Q + L P PV+ E + Sbjct: 69 DLLLIGQDVVHDESSPANRNLSIYSGAIRGLQLPNLPAGKFLPPDVLPVLKT----EGLF 124 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 F L + + + ++ + L L + RS ++ L+ + Sbjct: 125 PDFCHLLEFMYRGAQGKGCHPEESINHLLCALLLLVMEVTSRSVVLPPEEHHLLAGVRSR 184 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 L+ Y E ITL L+++F S ++ H F Y +P+ Y+ +RR+ EA+ L +T L Sbjct: 185 LDAAYDETITLAGLAQEFHVSTFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDTALPI 244 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 EI+ R GY + +F K F + G SP DYR+ ++ Sbjct: 245 TEIAIRTGYNSSSYFNKAFHKITGMSPRDYRKTYRKI 281 >UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing protein n=12 Tax=Enterobacteriaceae RepID=B7MQA3_ECO81 Length = 289 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 7/257 (2%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 + H+H ELI + +G + I +Y D+V+ +H + P T Sbjct: 29 YVRFMHMHPQTVELILITEGDGEYFIGDRIYPVRKGDLVIYNSQVVHDEYLESGRPIGTI 88 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 C + G EN L+ PVI ++ L + + ++ Q + Sbjct: 89 CCGINNISCPGLRENALIPDDIVPVIPLYHHYATVEKLMSSVFTVINQHAVEGPA--MAQ 146 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 + + Y E + + L+ I Y++ N+ E I L+ L+ KF S Y Sbjct: 147 LLTQVVLKYIEGNVLLRTGNDAIQRHENLLDSIKSYIDRNFYEPIRLDTLATKFNVSPYY 206 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTEL----SQAEISWRVGYENVDHFAKLFL 268 + HEF + Y SP++Y+I+RR+ EA+ L T+ I++RVG+ N+ HF F Sbjct: 207 VSHEFKRRYGYSPMDYLIKRRLGEAQSLL-TTDKGGREKITSIAYRVGFSNLSHFQNYFK 265 Query: 269 RHVGCSPSDYRRQFKNC 285 VG +P YR+ ++ Sbjct: 266 NKVGKTPGQYRKDYRKA 282 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 14/242 (5%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 + + V G + + + D+ + + +L A+D DP Sbjct: 40 RDHYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLITYAADETDPWEYYWVG----- 94 Query: 101 FQGAEENQLLQ----PHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYT 156 F GA N+L+Q PV + V + L+N + L + Q +L + Y Sbjct: 95 FNGACANKLVQQTPFSDLHPVHHCKDPQAVREALYN---IYLSRGPEPQCEALMTGYLYI 151 Query: 157 LAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 + ++A + + VL + Y+ NY I+++ ++K S S++ Sbjct: 152 FMAHLMKEARDAMPNVGSSSSQYVL--SAIKYIQFNYSHDISVDDIAKAVGVSRSHLYRV 209 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 F SPI+Y+ R++EA L N+ LS AEI+ VG+ + +F+++F + G PS Sbjct: 210 FMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPS 269 Query: 277 DY 278 Y Sbjct: 270 KY 271 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 109/282 (38%), Gaps = 11/282 (3%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 T+ + P + + H H E E+ YV +G F IDS A + Sbjct: 12 STVHGNERFPFGAYWYQFAPGAHVVDSHWH-KEAEIFYVMEGEVLFQIDSEYIPVRAGEA 70 Query: 71 VVIERGRLHAVASDVNDPATTCTCAL---------YGFQFQGAEENQLLQPHSCPVIAAG 121 + I+ G LH + N+ + C Y +G + + P Sbjct: 71 IFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTS 130 Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLW-DAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 E + E+ ++ +++ F N RSE + + Sbjct: 131 GTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMTRTE 190 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 +K ++ Y+ ++Y I L +L+ S C F +P++Y+ R+ +A Sbjct: 191 RLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAEL 250 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L + + ++I+ VG+ ++ +F ++F + + C+PS+YR++ Sbjct: 251 LRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 7/246 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H HD+ EL+ V +G + ID Y A ++++ +H T A+ Sbjct: 1 MHEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAI 60 Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYT 156 G + G + LL CPV Q +++LF+ + +S + L A Sbjct: 61 GGLRIDGLPADHLLPDGYCPVQPLRQHFAEVQSLFDAIEKE-AKSHAEIANYLTMALITK 119 Query: 157 LAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 LA E Q + L +++ NY+E I L ++ + Y+ H Sbjct: 120 LAAFLREEGL------QEEQQTPTLAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHL 173 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 F E +SP+ YVI RR+ EA+ L NT+++ +I+ +VGY N ++F +F + +P Sbjct: 174 FKAEIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPG 233 Query: 277 DYRRQF 282 +YRR++ Sbjct: 234 EYRRKW 239 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 9/275 (3%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 + + + L + + W S H H + TEL YV KG F I + + +D Sbjct: 11 KPALINNQARLLYVSSSKYEGDWHSQLHSH-HFTELFYVTKGCGGFKIGADEFNVQENDF 69 Query: 71 VVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL 130 V+I +H S +P A+ G F+ E++ A E++ L Sbjct: 70 VIINPNTMHTEVSRDRNPLEYIVIAIDGISFEIPEDS---LKDYISCNYANYKNEILFYL 126 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAI-LYYENFKNAYRSEQGYIKKDVLIKDILFYL 189 L V Q+KN + L I + N N ++ I+K++ + I Y+ Sbjct: 127 --NLMVKESQAKNELYDDMCQQLMQVLLINILRLNRINVSLTQGKTIRKEIFM--IKNYI 182 Query: 190 NNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQA 249 + NY ++ITL+ L++K + Y+ HEF + +SPI+Y++QRR+ E+K+ L +T+LS + Sbjct: 183 DRNYHKEITLDTLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYLLRDTDLSIS 242 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 +IS +G+ ++ +FA+ F + SP YR+ + Sbjct: 243 QISTILGFSSLSYFAQAFKKSTNFSPLQYRKNHQK 277 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 4/253 (1%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 + W+S H H +EL YV G F I++ ADD+++I H + ND Sbjct: 27 KYEGDWQSHPHTH-QFSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEHTEKTMSND 85 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 P T + G F +N P G K + K + Sbjct: 86 PMTYIVFGVEGLAFYFNSQNA-ANPKGYSYYNYGSAKTHFINFSQIMIKEFNARKPGFEA 144 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 L + E + I K+ + Y++ NY + ITL+ L++ Sbjct: 145 ICHGLLQVLLVYITREQHLSVISDTTLQISKECFV--AKKYIDANYAKNITLDLLAEITH 202 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + Y+ H FT+ SPINY+++ R+ +K L ++ S AE++ G+ + +F+++F Sbjct: 203 INKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSYFSQIF 262 Query: 268 LRHVGCSPSDYRR 280 ++ G SP YR+ Sbjct: 263 RKNTGMSPLQYRK 275 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 120/294 (40%), Gaps = 17/294 (5%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTIDSSLY 63 D L G + ++ G H H E E+ + +G + ++ +LY Sbjct: 8 DKNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHP-ELEIACILEGTMTYQVNQNLY 66 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ- 122 D + + LH+ N+ G E++ + ++ P++ Sbjct: 67 QLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPLLNTDNF 126 Query: 123 ----------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSE 172 G E + + E++ + + A+L+ E ++ S Sbjct: 127 TSFVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQRSQLPSG 186 Query: 173 QGYI--KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 G K+ +K+ + +++++Y + ITL+Q+++ S S C F K +P Y++ Sbjct: 187 AGLAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQTPFEYLL 246 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + R+ ++ L S EI+ +VG+ +++++F +++GCSP +Y++ N Sbjct: 247 RYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNLMN 300 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 118/273 (43%), Gaps = 14/273 (5%) Query: 13 LFVAGKTPRLS-RFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 F+A P S R A +D S +H E+ Y+++G + I+ S Y+ D+ + Sbjct: 7 FFMAEGRPFASERIAGVNDNMVRSHYH---EFFEIYYLEQGRRQHIIEDSQYILQPDEFI 63 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLF 131 + +H + + P + Q+L+ S + ++ Sbjct: 64 IFPPFVMHHSFEENDVPFRRLLLYFNPEVIRSP---QILRTLSERARVYKLPRAQSAPIY 120 Query: 132 NELSVILPQSK--NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYL 189 N + IL + + + + L LA+ N A R EQ + DI+ YL Sbjct: 121 NLMKDILQEQERDDLYSRELITLMVNALALQLVRNSDEAARPEQ-----RNRVTDIINYL 175 Query: 190 NNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQA 249 + ++ E ITLEQL+ F S ++C EF + + + Y+ R+ A+ L ++ S Sbjct: 176 HEHFTEDITLEQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSIT 235 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 EIS RVG+ NV HF +++ G SPS ++ + Sbjct: 236 EISKRVGFSNVTHFNRVYKSVTGMSPSQNKQAY 268 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 5/249 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H HD E E++Y++KG A F +D Y + + G +H ++ N +L Sbjct: 36 PHWHD-EFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSL 94 Query: 97 YGFQFQGAE--ENQLLQPHSCP--VIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 +G + +++ LQ S ++ E + L + + + + + Sbjct: 95 SMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKGY 154 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 L+ + + A +++ K IK L ++N+NY I ++ L+K S Y Sbjct: 155 LFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFY 214 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 C F + ++P++Y+ + R+ +A + NT LS +EI++ VG+ NV +F K+F +VG Sbjct: 215 FCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVG 274 Query: 273 CSPSDYRRQ 281 +P Y++ Sbjct: 275 VTPFKYKKN 283 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 118/253 (46%), Gaps = 12/253 (4%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 W+S H H N E Y+ G +F+++ + A+D++++ +H S+ + P Sbjct: 55 DWKSLPHSH-NFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSKPMEY 113 Query: 92 CTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 + G +FQ ++ +L + + K + FN L+ + + + + Sbjct: 114 IVLGIEGIKFQAEDQGYIL-------LNSSAHKSDLHLYFNSLAHEMKSEQPYRNFVCQN 166 Query: 152 AFAYTLAILYYEN-FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 ++ + FK + S ++ + K Y+ NY+E IT+E LS + Sbjct: 167 LLNIIFTMILRNDAFKISIVSGPKLTRECNIAKK---YIEENYQENITIETLSSLVHLNK 223 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 Y H F K++ SPINY+I+RR+ E+ L +T S + IS VG+ + +F++ F R Sbjct: 224 YYFVHNFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAFKRM 283 Query: 271 VGCSPSDYRRQFK 283 +P +Y++ +K Sbjct: 284 TNITPQEYKKMYK 296 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 17/280 (6%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 + + RF+ G H HD E+ Y+ G + I +Y A D+V+ Sbjct: 13 MLFIEAAKQPGRFSMD-------GEHFHDA-WEIYYLVSGERCYFIKDQIYRIGAGDLVL 64 Query: 73 IERGRLHAVASD--VNDPATTCTCAL----YGFQFQGAEEN--QLLQPHSCPVIAAGQGK 124 I LH + ++ P G EE QL + ++A + + Sbjct: 65 IPVNVLHKTSPSGKLSQPHERILVNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQ 124 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL-IK 183 V + L L+ Q+ + L +L N + + E+G K+ I Sbjct: 125 LVQQLLARMLAEQKQQAGGYEEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIA 184 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 ++ Y+N +Y E ++L L+ +F S Y+ H F + ++ + Y+ + R+ EA L Sbjct: 185 EVARYINAHYDENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRE 244 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 TEL EI++RVGY++ HF ++F + SP YRR+ + Sbjct: 245 TELPVTEIAYRVGYQSGTHFGRVFKKAKAVSPQSYRREQR 284 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 9/293 (3%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLY 63 D ++ L V G FS K+ +G H H E E+I + +G I++ + Sbjct: 3 DENNKELAVHGNYEFPCAVYFSYVSKYTAGEIDWHWH-KEIEIINIYQGTLYVEIENKKF 61 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG 123 + D + I +H + + + + G + N + Q + P+I + Sbjct: 62 ILSKGDSLFINSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKEL 121 Query: 124 K--EVIKTLFNELSVILPQSKN---SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 E+ K +L+ N + + + L + +N K +S Sbjct: 122 SALELTKEDSKKLAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTD 181 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 IK +L ++ NY E I+L ++K+ F + ISPI Y+++ R+ A Sbjct: 182 KERIKRMLAFIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAA 241 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEI 291 L N+E AEI + G+ + +F+K+F R +G +P +YR+ + +I Sbjct: 242 EMLRNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKNKVKSDIKNKI 294 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 4/248 (1%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W+ G +V ++ + VKKG FTI Y A +I G +D +DP + Sbjct: 66 WKFGPYVRESYV-IHIVKKGKGVFTIGGKSYELEAGQAFIIRPGEETIYKADDDDPWSYM 124 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 +G++ + E+ + S P+I Q + N L Q A Sbjct: 125 WVGFHGYRAEDFIESMGYKKDS-PIIKIEQMDTCATCINNML--EYSQITRINEVKRQSA 181 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 A + +N ++ + +K + ++ Y KI ++ ++ S S+ Sbjct: 182 LMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSH 241 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + F KE +SP Y+I R+ +A L +++ I+++ GYE+ F+K F + G Sbjct: 242 LTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFG 301 Query: 273 CSPSDYRR 280 SP +R Sbjct: 302 MSPKSFRN 309 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 104/258 (40%), Gaps = 6/258 (2%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 D W S H H TEL YV G F I + A+D V+I H S + Sbjct: 27 KYDSDWHSTLHTHP-FTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDS 85 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 P + G F + ++ K + L+ ++ ++ N S Sbjct: 86 PLEYIVVGIQGLSFSNLTPV----DQGGHPFSFFNLRDEQKDILRYLNAMVQEATNQALS 141 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQG-YIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 +L + E G + K I I YL YRE I LE L+ Sbjct: 142 YDLVCHNLLEILLIKILRHQHFDLEVGSHSKTTKDIAFIKHYLKTYYRESIQLEALASMT 201 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S YI H F KE +SP+ Y++ R+ E+K L T S ++++ VG+ +F+K Sbjct: 202 HLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQ 261 Query: 267 FLRHVGCSPSDYRRQFKN 284 F + G SP+DYR +++ Sbjct: 262 FRKITGISPTDYREKYQK 279 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 70/284 (24%), Positives = 114/284 (40%), Gaps = 10/284 (3%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M + F S A L+ + + W S H H TEL YV+ G F I+ Sbjct: 1 MSSQSF-RFSPEHPTAQNITLLNTSSSRYEGDWPSIPHSH-AFTELFYVRDGQGDFLIED 58 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 ++ DD+V+I H S + P + T + G F + + Sbjct: 59 QIFPISKDDLVIINPHINHTEISKGSPPLSYFTVGVDGLCFSFNGHKEY------RIFNC 112 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 + K + FN L L + + + IL ++ Sbjct: 113 REKKTDLLFYFNSLFQELDRQSEGYETICSHML--DILILQLRRITDSPFELITAQHPSK 170 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 I YL++NY E ITL+ LS+ + Y+ HEFTK Y ISPINY+ ++R+ K Sbjct: 171 ECAHIKRYLDSNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKEL 230 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 L NT+ ++I+ G+ + + ++ F + G + YR+ K Sbjct: 231 LENTDYGISDIAHLTGFSSQSYLSQSFRKSCGMTAGTYRKLKKK 274 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 11/257 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTI-DSSLYVAHADDIVVIERGRLHAVASDVNDP 88 D W S H H EL+YV +G F D+ ADD+++I LH SD Sbjct: 25 DSDWHSTLHSHP-FAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVLHTECSDAEGG 83 Query: 89 ATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP--QSKNSQT 146 + G +F + ++ P ++ ++ + + IL ++ + + Sbjct: 84 LEYIVLGIDGVEF-------YTEQNAHPGVSIHNYEDYKHEILFYIKAILEAGKTHDEMS 136 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + + L + + E + + YLN +YRE ITL+ L+ Sbjct: 137 ELIVENLLRVLVLNTMRRTTSLLDVETSTGGDNKDCIFLEHYLNLHYRENITLDHLASLT 196 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 + Y+ H F ++ +SPI+Y++++RM EAK L NT+LS +IS VG+ + +F++ Sbjct: 197 FLNKFYLSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISDIVGFRSPSYFSQF 256 Query: 267 FLRHVGCSPSDYRRQFK 283 F SPS +R + K Sbjct: 257 FKNMECMSPSSFRNKHK 273 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 200 bits (508), Expect = 6e-50, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 130/290 (44%), Gaps = 13/290 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 +++ E + G + F + + H H++ E+I+V G + +++S+ ++ + Sbjct: 11 NSSGEEVQKHGTSEFPIAFYEENLSSYSIPWHWHED-FEIIWVISGSIKVSVNSTEHILN 69 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV 126 + + I G LH++ + ND ++ + G+ ++ Q + P+I + Sbjct: 70 KNQGIFINAGFLHSIHA-TNDGEYVLRSIVFHPRLIGSIDSIYWQNYIEPIIQNKNLPYI 128 Query: 127 I-KTLFNELSVILPQS----------KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 + N IL S +N + + + + I+ + + Sbjct: 129 LLDPFINWQDKILAYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSICEAKPSIRN 188 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 ++ IK +L Y+ ++ E IT+ L++ S S + F + +P Y+ Q R+ Sbjct: 189 LRNADRIKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQ 248 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 +A L +T+++ +I+++ G+++ +F K F +GC+P +YR++ + C Sbjct: 249 KACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKRDQQC 298 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 8/264 (3%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 L + WES H H +EL YV G F ++ + ++++I Sbjct: 3 YRLLYSSYSKYEQDWESYPHTH-YFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIR 61 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVIL 138 H SD N P + G F + + L I E + F+ + + Sbjct: 62 HTEVSDKNSPLEYIVLGVEGLNFLIYNDKEYLN------IQCEDFSENLDFYFHTILREM 115 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 + K S ++ L I + + K ++++N+RE IT Sbjct: 116 DEQKESYE-TICQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENIT 174 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L+ L++ + Y H FT+ Y I+P+NY+ Q+R+ ++ LT+T+L+QA I+ + G+ Sbjct: 175 LDTLAELTHLNKYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFS 234 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQF 282 + +F++ F + G +P+ YR+QF Sbjct: 235 SSSYFSQCFRKICGMTPTAYRKQF 258 >UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEI2_9ENTR Length = 289 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 6/283 (2%) Query: 1 MYQRCFDN-ASETLFVAGKTPRLSRFAFSD--DPKWESGHHVHDNETELIYVKKGVARFT 57 M C + S F G PRL+ ++ + H HD+ EL++++ G + Sbjct: 1 MLTYCLNEHPSARGFENGHRPRLTFICKAEGIEAAIPRVMHKHDDRFELMFIRAGSGIYN 60 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 ID Y D+++ LH +D +C + + +G +N L H V Sbjct: 61 IDGRGYQVQRGDLLLFNANVLHDENPAPSDDLLIFSCGVEQLKVEGLPQNVLTTRHQVAV 120 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 + +G+ + I LF+++ + SK +S + D L +L + + +Q Sbjct: 121 MPSGEFYDEICQLFDQMWSHVS-SKRLFSSEVGDNLISILLLLCRNIWIENKQDQQN--N 177 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 +L + I Y++++Y+++I L+ ++ + Y+ H F SP Y +RR+ EA Sbjct: 178 HTLLGQRIKDYIDDHYKDEIALKSITAALNMNQFYLAHVFKAYSGYSPKQYQTRRRIGEA 237 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + L +T L E++ VGY+NV++F ++FL +G P+ Y++ Sbjct: 238 QSLLLSTNLGVTEVANAVGYDNVNNFHRIFLNLIGIPPARYKK 280 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 2/263 (0%) Query: 23 SRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVA 82 S F + ++ H H+ +EL+ V++G F +D Y +++ RG H Sbjct: 17 SEFNCHEASPFQHPLHRHETFSELLLVEEGRGTFVVDGKPYEVGPGTVLLYHRGIWHEEW 76 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSK 142 S + P A Q +G +N L P PVI G+ + +L E L Sbjct: 77 S-THYPFRATYFAFKDLQVKGCPQNYFLGPDQAPVIELGEKTDETASLVRECLAELHSGL 135 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 ++ F LA L + + +IK Y+ NY++ ITLEQL Sbjct: 136 AESRAAANHLFGLLLARLARLVPGESTERRIVKPAEAAVIK-ARGYIEENYQQPITLEQL 194 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 +K S Y+ H F +E IS I ++IQ RM AK L T EI VGY++ Sbjct: 195 AKVTFVSKYYLSHLFQQEVGISVIQFLIQCRMEAAKRYLIMTGRPVKEIGELVGYQSEPT 254 Query: 263 FAKLFLRHVGCSPSDYRRQFKNC 285 F LF + G +P +R + Sbjct: 255 FHNLFKKVTGLTPGQFRESAREK 277 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 123/276 (44%), Gaps = 12/276 (4%) Query: 15 VAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 V+ TP F D + +G H H NE E++Y+++G+ +F +D Y + + + Sbjct: 13 VSHGTPDFPLFVHEDIFVYRNGVVNPHWH-NEFEILYMERGIGKFYVDGYEYKLNEGEYL 71 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA------AGQGKE 125 + G +H+ + E + + P+I + E Sbjct: 72 FVNSGSIHSGLEMIKRSIGYAIV-FDLRLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDE 130 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 I+ + + + + ++ + + K IKD+ Sbjct: 131 HIRNDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFKY-YAERRNQDGRLGYKIERIKDV 189 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 L Y+N NY + ++L++LS++ S Y+C F + R+SP+ Y+ + R+ +A L NT+ Sbjct: 190 LNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTD 249 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +S +EI++ G++N+ +F K+F +++ +P +R+Q Sbjct: 250 MSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 11/260 (4%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH------AV 81 P++ +H H+ E ELI++ G TI+ + A DI+++ G LH V Sbjct: 26 ESHPQYAMPYHWHE-ELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTPYDCV 84 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 + P + + Y +F + Q L I +L L ++ S Sbjct: 85 YECLVFPVSLLSSQTYASEFLNRLDRQDL---ILDEYFPAGDDTAIHSLLERLFALMQDS 141 Query: 142 -KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLE 200 + + L + + +L + + +S+ + L+K++L Y+ +Y EKITL Sbjct: 142 DEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITLH 201 Query: 201 QLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENV 260 +L++ S Y CH F++ +PI+YV R+ A L S +I+ G+ +V Sbjct: 202 ELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFNDV 261 Query: 261 DHFAKLFLRHVGCSPSDYRR 280 +F + F ++ G SP Y + Sbjct: 262 SYFTRAFKKYKGISPGQYLK 281 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 21/286 (7%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 +DN L++ S+ P ++ H H++ ELIYV +G + I+ + Sbjct: 16 YDNPGVPLYIRTGI-------LSNYPDMKALCHWHED-IELIYVIEGEMNYRINDRDILL 67 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ--- 122 D +V+ +LH + + + + ++ Q + P I Sbjct: 68 KEKDCLVVNSRQLHYGYAHLRRECRFICILFHPGLLNASP--KIYQYYVAPFIENKNIAY 125 Query: 123 --------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 E ++ L N + ++ + K++ IL+ ++ + Sbjct: 126 FHYAADSANHEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLEQEPAY 185 Query: 175 YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 L K ++ Y+ +Y++ +TL+ ++ S S C F + R SPI++ + R+ Sbjct: 186 DYSDLTLQKKMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFANKYRL 245 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +++ L NT S A+I+ G+ ++ +F+KLF R GC+P++YR+ Sbjct: 246 EVSRYLLANTRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRK 291 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 12/257 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H +E E +Y+ G ++I+ Y A + + I +LHA S P C Sbjct: 34 FFYLHWH-SEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSFNGMPCEACV 92 Query: 94 CALYGFQFQGAEENQLLQPHSCPVIA-----------AGQGKEVIKTLFNELSVILPQSK 142 + F +++ P++ + + ++ L +EL + ++ Sbjct: 93 VLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEEEWQRLVMKLLSELDDLKYENV 152 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 + L + Y + A + + K ++ +L Y++ NY+E+ITL L Sbjct: 153 SENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERMQPVLNYIHENYKEEITLMAL 212 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 +K S CH F + ISPI YVI+ R+ ++ LT T+ A+I+ VG+ N+ + Sbjct: 213 AKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIARNVGFNNISY 272 Query: 263 FAKLFLRHVGCSPSDYR 279 F + F++ +GCSPS YR Sbjct: 273 FNREFIKAIGCSPSKYR 289 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 8/277 (2%) Query: 18 KTPRLSRFAFSDDPK-WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERG 76 K S + + + ++ H HD E E+IYVK G I Y+ D V+ G Sbjct: 14 KDDPFSTYHIENAGQSFQIPVHWHD-EFEIIYVKSGFLTVNISGENYIGKPGDAFVVSPG 72 Query: 77 RLHAVASDVNDPATT---CTCALYGFQFQGAEENQLLQP-HSCPVIAAGQGKEVIKTLFN 132 LH + S F +++LL+P S ++ + K+ IK L Sbjct: 73 NLHFMGSKTGTVDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKELCE 132 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYY--ENFKNAYRSEQGYIKKDVLIKDILFYLN 190 +L I K+ + ++ + +L + E ++ + E ++++ K+++ Y+ Sbjct: 133 QLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNIVEKEMVSYIQ 192 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 N+ KI+L++ ++F S YI F + + I+ YV R+ AK L +T++S E Sbjct: 193 QNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISVTE 252 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 + R GY+N+ +F + F + G SP YR++ +C Sbjct: 253 AAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQVDCMQ 289 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 13/256 (5%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 H H +E E IY++ G A F I + + A + + I G LH + P + Sbjct: 34 HCHWH-HEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLHGAYPVSDKPFSLYATV 92 Query: 96 LYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL-----FNELSVILP------QSKNS 144 ++ F + L+Q + IK +++ +L Q K Sbjct: 93 VHP-DFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDMLTMLQATISQFQQKEE 151 Query: 145 QTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 + A + ++F + G ++ IK +L +++ +Y EK+T++QL+ Sbjct: 152 GYELVIKANLLQMMAELVKHFPRTEEQKTGTPQQIRQIKKVLQFIDEHYDEKLTIKQLAN 211 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + S + F R++ + Y+ +R+ +A L T+ + +IS VG+++ +F Sbjct: 212 LVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTIMDISMSVGFDHPSYFI 271 Query: 265 KLFLRHVGCSPSDYRR 280 KLF RH C+PS++RR Sbjct: 272 KLFKRHKRCTPSEFRR 287 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 10/256 (3%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 D+ W+S H H + TEL++V G F+ + D+V+I H S N Sbjct: 27 KDEGDWKSIMHTH-HFTELLFVVSGEGSFSFNQEQSPLRRGDLVIIPPYTEHTERSSQNH 85 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS-VILPQSKNSQT 146 P + G F ++ + Q V + I LF ++ I SQT Sbjct: 86 PLEYYVLGIDGISFLSQKDRECAQ-----VFCNFEHDPSIHELFRQMLYEIRTAQYGSQT 140 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 L I+ + + K+ IK+ YL++NY E ITL+ L+ Sbjct: 141 ICQHLLEILILKIIRSQQLIPVSINSIRMTKECAQIKE---YLDSNYAEHITLDTLTGLT 197 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 + Y+ H FTK +SPI Y+ Q R+ A+ L NT S ++I+ G+ + +F ++ Sbjct: 198 HMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHLLKNTNYSISDIASSTGFSSQSYFTQI 257 Query: 267 FLRHVGCSPSDYRRQF 282 F ++ +P YR++ Sbjct: 258 FRKNFNMTPVKYRQEH 273 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 5/257 (1%) Query: 29 DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDP 88 + P E+ +H H++ EL ++ G + I+ Y +++ G H + N Sbjct: 26 EIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKGQVLISNPGVYHQELFEANTN 85 Query: 89 ATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS 148 L + + + V+ + K+ I E+ + Sbjct: 86 CRELHIGLTNLNLFSNVKKDYIDIGNKNVLTFTKYKDEILKSCLEIVEEQKTYNQTSPFM 145 Query: 149 LWDAFAYTLAILYYEN-----FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 L L +LY E +++ +K L++ I YL NY E I+L LS Sbjct: 146 LKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVESITKYLTENYTEDISLYTLS 205 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 K S YI F + SPINY+IQ R+++AK L +++LS I+ VGY + +F Sbjct: 206 KNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDDSKLSIKSIAKMVGYSDPYYF 265 Query: 264 AKLFLRHVGCSPSDYRR 280 +KL+ ++ G SP+ R Sbjct: 266 SKLYKKYYGVSPNKSRN 282 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 6/253 (2%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G V N L Y G + +++ +Y A D +I + +D ++P T Sbjct: 6 PNYSYGPAVRPNYL-LHYCLSGQGEYHVNNQVYQIKAGDAFLIMPNVVTYYQADQHEPWT 64 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 F G++ Q L+ + + I L IL +K S ++ L+ Sbjct: 65 YL-----WISFDGSKTRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELF 119 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 + N ++ + + + Y+ NNY+E +T+ +++ + Sbjct: 120 IQGQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNR 179 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 SY+ F K +SP ++++ RM A+ LTNT+L+ +I++ GY N F+K F Sbjct: 180 SYLTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNS 239 Query: 271 VGCSPSDYRRQFK 283 +P DYR+QFK Sbjct: 240 HQMAPRDYRKQFK 252 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 119/255 (46%), Gaps = 7/255 (2%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 ++ H HD E E+IYVK G+ +I Y+ A D V+ G LH + S Sbjct: 42 SFQIPVHWHD-EFEIIYVKSGLLTVSISGESYIGKAGDAFVVSPGNLHLMGSQTGTVDYF 100 Query: 92 ---CTCALYGFQFQGAEENQLLQP-HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 F+ +++LL+P +S ++ + K+ K L +L I + S Sbjct: 101 TFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAKELCEQLIDIYMAENDETES 160 Query: 148 SLWDAFAYTLAILYY--ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 + + +L + E +K + E ++++ K+++ Y+ N+ KI+L++ ++ Sbjct: 161 KITAQIKTKIILLQFILEMWKKGFVIENDTSGRNIVEKEMVSYIQQNFTGKISLKEFGEQ 220 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 F S YI F + + I+ Y+ R+ AK L +T+LS E + + GY+NV +F + Sbjct: 221 FHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDLSVTETAMQSGYQNVSYFIR 280 Query: 266 LFLRHVGCSPSDYRR 280 F + G SP YR Sbjct: 281 SFKKAYGISPLKYRN 295 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 9/280 (3%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 F + S+ + + ++ + + W S H H TEL YV +G F I++ + Sbjct: 5 FFSFSDDTPFSTEAVLVNASSSHYEEDWPSIPHTH-AFTELFYVSEGSGEFLIENQHFSI 63 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 DD++++ H S P + T + G F ++ + + Q Sbjct: 64 KKDDLIIVNPHIQHTEISLSASPLSYYTVGVDGISFSFHDQKEF------QIFHYHQKHA 117 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 + F+ L L + + A ++ L + + K+ + + Sbjct: 118 DLLFYFHSLFQELDEKNDGYEEICKHTLAILISQLRRFAVSDFQLFPSFHPSKECAL--V 175 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 YL+++Y + I LEQL+ + Y+ HEFT+ Y ISPI+Y+ RR+ K L NT+ Sbjct: 176 KRYLDSHYSDDINLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTD 235 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 ++I+ G+ + + A+ F ++ G + +YRR KN Sbjct: 236 HEISDIAHLAGFSSQSYLAQSFRKYCGMTAGEYRRSKKNQ 275 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 10/268 (3%) Query: 16 AGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 K+ + + W S H H TEL V GV F +++++Y D +++ Sbjct: 15 TTKSNLIYITYTKYENDWPSFMHTHP-FTELFLVTGGVGEFYVENNIYPLKKGDFILVNP 73 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS 135 H SD +P A+ F + N L+ I + + Sbjct: 74 NASHTEKSDEKNPLEYIAVAVDNFSLNLTDTNHLM-------FNCISKNPNIIKYMDSML 126 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 + + + + + I K+ +E K + Y+++NY Sbjct: 127 AE-QEGNKAYSDHICQNILEIILIEILRITKSDIDTEPTVNASKECFK-LKKYMDSNYAS 184 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 KIT++ L+K + Y+ H F K + SPINY+ R+ AK L N++ S ++IS Sbjct: 185 KITIDDLAKLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQST 244 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRRQFK 283 G+ + +F + F++ G SP YR + K Sbjct: 245 GFSSQSYFTQCFIKSCGLSPKAYRNRTK 272 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 58/273 (21%), Positives = 106/273 (38%), Gaps = 14/273 (5%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P + P++ H H NE E+IYV+ G +D + A +I G + Sbjct: 17 FPYACYRVTENFPRYNMIPHWH-NECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSM 75 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA--------AGQGKEVIKTL 130 H D + +Q+ H P+I E K Sbjct: 76 HGGT--PKDNCRYDCLVFD--MAALLKSSQICTLHLQPIINHERRFITFFSADSEPAKDA 131 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 + +L + + + I+ + + + IKK K+++ Y+ Sbjct: 132 KAVIDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIE 191 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 NYR+ ITLE+L+ + + +Y C F + +P+ Y+ R+ A + +T+ + Sbjct: 192 QNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLID 251 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDY-RRQF 282 I+ + G+ + +F K+F G +P DY RR F Sbjct: 252 IAMKCGFNDYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 25/290 (8%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 S + F+ + RF D W + H+ E++Y+K+G A F I +D Sbjct: 18 SSSTFIPVIVKTIERF---HDTSWHMEPNKHEC-FEMVYIKRGKAVFEIAGYPAEIGPND 73 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE---- 125 I++I+ + H F+F + Q + GKE Sbjct: 74 IIIIKPNQPHKFIVKSESGCEFIVL---SFKFVNRFDGQYSDVSLENFLDFVSGKETGPF 130 Query: 126 ------VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL------YYENFKNAYRSEQ 173 + L+ IL + +N S + + + + ++N+ +++ Sbjct: 131 ITLKVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKS 190 Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 IK+ LI+ + Y+NNNY I+L+ +++ S SY F +E ISPINY+++ R Sbjct: 191 PKIKE--LIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIR 248 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 + AK L +T+ ++I+ VG+ N F +F ++V +P YR+ + Sbjct: 249 VERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 101/266 (37%), Gaps = 12/266 (4%) Query: 26 AFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV 85 ++ P+ + H H+ E E YV G + + D + + G LH V Sbjct: 29 CYNASPEVQVPWHWHE-EYECSYVFHGAVTYHTPQGEFRLGEGDGIFLNSGTLHTVEVAP 87 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIK-----------TLFNEL 134 +G G+ ++ L Q + P+ A + +I + + Sbjct: 88 AGSLKKSDLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTLILRRTVSWHAEILSRIKKA 147 Query: 135 SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYR 194 + ++ + LY A + ++ IK +L YL NY Sbjct: 148 VRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAATASENARIKQMLRYLQENYT 207 Query: 195 EKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWR 254 ++T+ +L+ F K +SPI Y+I+ R+ + L ++LS EIS Sbjct: 208 RRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIARSCILLRESDLSVLEISNL 267 Query: 255 VGYENVDHFAKLFLRHVGCSPSDYRR 280 G+E+ +F K F + G +P+ YRR Sbjct: 268 CGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 8/264 (3%) Query: 18 KTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGR 77 T LS DD W S H H + TEL YV G +F + + D+V+I Sbjct: 17 NTRLLSISLVKDDKDWNSVFHTH-HFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYL 75 Query: 78 LHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVI 137 H S + F +Q + + + +F ++ + Sbjct: 76 EHTEQSVKGKSLEYYVIGIDKISFLAENGQTGIQ-----AFCNFRDQSSVSDIFAQM--L 128 Query: 138 LPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKI 197 + S + + IL + + I YL+ NY E+I Sbjct: 129 YEMRNDDYGSEIICQNLLEILILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERI 188 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 TL+ L+ + Y+ H F K +SPI Y+ +RR+ A L +T+ S ++I+ G+ Sbjct: 189 TLDTLTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGF 248 Query: 258 ENVDHFAKLFLRHVGCSPSDYRRQ 281 + +F + F ++ G +P YR+Q Sbjct: 249 SSQSYFTQSFRKYYGMTPLQYRQQ 272 >UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales RepID=C7X929_9PORP Length = 296 Score = 193 bits (490), Expect = 7e-48, Method: Composition-based stats. Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 13/241 (5%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G + I Y ++I G ++ +D DP T +Y FQG Sbjct: 60 LIYCTEGKGWYRILGKQYTVEKYQYIIIPPGIPYSFGADEGDPWT-----IYWLHFQGKL 114 Query: 106 ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP-----QSKNSQTSSLWDAFAYTLAIL 160 +Q L H PV + ++ I K S + + + + Sbjct: 115 CDQFLPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFI 174 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 Y E F++ Q K+ ++ Y+ N ++ +TL++L+ F+ S S+ F E Sbjct: 175 YLEQFRHIMIPSQ---KEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGE 231 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +SP+NY I+ ++ +A + T + EI+ +G+E+ +F++ F + +GCSPS YR+ Sbjct: 232 TGVSPMNYFIRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRK 291 Query: 281 Q 281 + Sbjct: 292 K 292 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 115/283 (40%), Gaps = 18/283 (6%) Query: 20 PRLSRFAFSDDPKW-----ESGHHVHDNE-----TELIYVKKGVARFTIDSSLYVAHADD 69 P + RF +P W G+H D E Y+ G +F I S+Y + D Sbjct: 7 PNILRFGSISEPLWIEFDRRIGYHSMDTTHYHRSYEFFYLYSGERKFFIRDSVYQIQSGD 66 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQG----AEENQLLQPHS--CPVIAAG-Q 122 ++++ +H S+++ P Y F E LL P + P+I Q Sbjct: 67 LILVNTNDVHRT-SELSQPNHERIVLHYDLPFFDGLSREETELLLSPFASAHPIIKLNLQ 125 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI 182 + ++ LF L L + + + L K + Sbjct: 126 ERMHLEALFESLLRELQECPPGYQLHVRNMATEILLFTARHALKRKSLPSIELTPVQQKV 185 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 DI+ ++N ++RE + L++L+K+F S ++ F + Y+ R+ EA+ L Sbjct: 186 TDIIRHINQHFREPLPLDELAKQFFISKGHLSRVFKEVTGFGFSQYINVTRIKEAELLLK 245 Query: 243 NTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 T+ S +IS R G+EN HF K+F G SP DYR+ +N Sbjct: 246 ETDWSITQISERCGFENFSHFGKVFKELSGLSPRDYRKLEQNQ 288 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 14/275 (5%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 F+ A L ++ D +W S H H TE+ YV KG ++D+ Y Sbjct: 26 FNKARPKLLYITESKF--------DHEWNSTLHTH-LYTEIFYVTKGHGLLSLDNKNYPV 76 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 DD+V++ H N + G + EE++ C + + K Sbjct: 77 KEDDLVIVNPLISHTERGIENVNFEYIVMGIEGVTYFSKEEDE---EQGCSIANYYEYKH 133 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 + + + S + L L N S KD ++ I Sbjct: 134 EVLFYLKTILFEVKTKDTEYQSLCQNLLEVLLINLMRRANINLKSSPINKANKDCVL--I 191 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 Y++ +++E ITL+ LS+ + +I H F + ISPINY+IQ+R+ EAK L+ T Sbjct: 192 EKYIDAHFKEDITLDTLSELTFLNKYHIVHAFKQYKGISPINYMIQKRLEEAKLLLSTTN 251 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L +EI++ VG+ + +FA+ F + SP YR+ Sbjct: 252 LQISEIAYIVGFTSQSYFAQAFKKATLTSPLQYRK 286 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 10/245 (4%) Query: 44 TELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG 103 ++ ++ G ++ + + R+ +D DP T G Q Sbjct: 43 YKIHFIHSGRGIVKVEGETFELTGGQAFLAYPERVIFYQADEVDPWTYSWIGFNGEQVAE 102 Query: 104 AEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA--FAYTLAILY 161 L P S PV+ L +L +L +++ S T+ Y L Sbjct: 103 ILSRTRLTPAS-PVLPMDTH------LMPQLYELLNEAEESNTTRDLRLQTLLYEFMTLL 155 Query: 162 YENFKNAYRSEQGYIK-KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 E + ++ + KD I L +L+++Y E++++ QL+ Y+ F + Sbjct: 156 VELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRKYLSSLFKRA 215 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + P Y+++ RM +A L N S AE++ VGY++ F+K+F + VG SPSDYR Sbjct: 216 TGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKTVGTSPSDYRE 275 Query: 281 QFKNC 285 Q++ Sbjct: 276 QWQKS 280 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 107/260 (41%), Gaps = 8/260 (3%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 S D ++ G + D+ + Y+ G R+T++ S++ D ++ +D D Sbjct: 28 SCDSLYQWGPGIRDHYL-IHYIISGKGRYTVNGSVHTLTPGDAFLVYPNTEVIYQADAQD 86 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 P G + + G E+ + L + + +N+ Sbjct: 87 PWEYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDARGTEFENALE- 145 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + TLA+ F +A S+ + ++ + Y++ NY IT+E ++ Sbjct: 146 -MTGRLYTTLAL-----FVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIG 199 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 S S++ F +SP Y+ R+ +A + L ++ LS I+ +G++N +F+K F Sbjct: 200 LSRSHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTF 259 Query: 268 LRHVGCSPSDYRRQFKNCFA 287 + G SP +YR ++K Sbjct: 260 HKIKGLSPKEYRSKYKKAQE 279 >UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KAQ8_BACHD Length = 287 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 3/252 (1%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G VHD L V +G F Y A D I L SD DP Sbjct: 30 PYHKVGPQVHDYFL-LHVVLRGKGSFHCAGKTYSLSAGDSFFIYPKELVTYESDRTDPWY 88 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 A G F+ + +QP S P+++ G +IK LF +L + + K + + Sbjct: 89 YTWVAFQGPFFEETLRSAGIQPES-PIVSLGGKGSMIKQLFYDLYSSMTELKVASSLKTN 147 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 ++ + S++ + D I+D++ L+ Y E +++E ++ + + Sbjct: 148 AYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLRYFEPLSIETIAASYGYNR 207 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 +Y +F + SP Y++ RM +A+ L + L+ E++ VGY + +F+K F + Sbjct: 208 TYFSKKFKEYTGYSPSKYLLNIRMKKAEALLQKS-LTIQEVASSVGYRDPLYFSKQFKQW 266 Query: 271 VGCSPSDYRRQF 282 G +PS +R+Q Sbjct: 267 SGVAPSVFRQQH 278 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 114/283 (40%), Gaps = 15/283 (5%) Query: 9 ASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 ++ + L P + G V+D + V +G FT Y A Sbjct: 10 SNPVITYNEHMNVLFAGESQTKPSHQRGPKVYDFYL-MHTVLEGKGEFTCGGKSYPLQAG 68 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIK 128 D +IE L + S+ ++P A F G + +L Q V I+ Sbjct: 69 DTFLIEPEALVSYISNADEPWLYRWVA-----FNGPQAAELAQAAGFSVANPVAETAAIR 123 Query: 129 ---TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV---LI 182 L+N + I KN + L A L + + D LI Sbjct: 124 RVGVLYNHIFSIF--RKNDPAAHLKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLI 181 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 + ++ YL+ Y + +++EQ+++ F + +Y+ F + SPI ++++ R+ +A+ + Sbjct: 182 QQMIHYLSTQYAQPVSIEQMAESFGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIR 241 Query: 243 NTE-LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 E L+ +I+ VG ++ +F+K F R G SPS YR + Sbjct: 242 EREGLTIEQIAASVGLQDSLYFSKQFRRFYGLSPSAYRESMRQ 284 >UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG17_9FIRM Length = 317 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 118/278 (42%), Gaps = 10/278 (3%) Query: 14 FVAGKTPRLSRFAF-SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 ++ + P R AF S + + H H++ E+IYV G ++ ++ + ++ +V Sbjct: 15 YMIPQYPVYIRSAFLSQYHNYTAVSHWHED-VEIIYVLSGTMQYDVNGENITLYENEGIV 73 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAE--ENQLLQPHS----CPVIAAGQGKEV 126 + H SD + ++ G + ++P + P + K+ Sbjct: 74 VNSRNFHFGYSDKKEECGFICFIIHPSVLSGNPYIRERYVRPFTECQAIPFLHLRPDKKW 133 Query: 127 IKTLFNELSVILPQSKNSQTSSLW--DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 L L + ++++ L +A +LY N + + + ++ Sbjct: 134 QNELLEVLWTVFHLNQDAPEFYLLCQEAVFRIFTLLYTNNMELLSEKSEKADISLIQLRK 193 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ Y+ +Y++ I L+ ++K + C+ F K SPI+YVI R+ ++ LT T Sbjct: 194 MVGYIQKHYQDSIMLDDIAKIGEMGKTACCNIFKKYMNTSPIDYVITYRLAQSTVLLTET 253 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L EI++ G+ N ++ K F + G +P R+++ Sbjct: 254 RLPITEIAYGSGFHNASYYTKSFRKQYGKTPGQMRKEY 291 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 110/281 (39%), Gaps = 15/281 (5%) Query: 15 VAGKTPRLSRFAFSDDPKW---ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 A R + + + G H H E E Y+ G + +++ ++ A D++ Sbjct: 18 YARNNDFPFRVDYEEITNYIGYSFGCHWHP-EVEFTYILSGSMIYQANNTQHLVKAGDVI 76 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAG---------- 121 + + LH+ + + G + + + +I + Sbjct: 77 FVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEGS 136 Query: 122 -QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 + E I +L L + + + LY + + K + Sbjct: 137 KKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNIM 196 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 IK L Y+++NY+E +TL+ +S+ S S C F K +P NY++ R+ + Sbjct: 197 QIKAALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSIPY 256 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 L + ++ E + VG+ + +++++F +++ C+P++Y+ Sbjct: 257 LLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNN 297 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 8/258 (3%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 D W S H H + TEL+Y+ KG F +++++ H SD N Sbjct: 27 KYDKDWHSTIHAH-HFTELLYITKGKGTFIFYKEEIPVQEHNLIIVNPNIEHTEKSDTNH 85 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 P + G F E P + Q ++ +L + + Sbjct: 86 PLEYIALGIQGLSFSSIE-----NPSPVTIHNYKQDQKNFLFYLQQLVEEVENHQEDYDL 140 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + + L + + N ++ I KD I+ I Y+ ++ E I+L+ L+ Sbjct: 141 IIQNILEILLLKMMRKKSFNVEKTSTQKINKD--IEFIKNYIKQHFHENISLDTLASISH 198 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + Y+ H F K +SPI Y+IQ R+ E+K L T S + IS G+ + FA+ F Sbjct: 199 INKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTNYSISNISTITGFSSQSFFAQSF 258 Query: 268 LRHVGCSPSDYRRQFKNC 285 R SPS YR + Sbjct: 259 KRETNLSPSQYRNAINSS 276 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 100/257 (38%), Gaps = 12/257 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+ E+IY+KKG T+D + + DI++I G +H ++ Sbjct: 39 HWHE-FMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYENILFS 97 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQG-----------KEVIKTLFNELSVILPQSKNSQT 146 F+ + L P++A + + N + + ++ Sbjct: 98 VDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETPKGYH 157 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 +L + +L+ + + + K IL Y++ NY+E I++ ++ Sbjct: 158 LALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDIASYC 217 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S S+ F +S ++Y+ R+ A L+ + S ++ G+ N+ +F ++ Sbjct: 218 GFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSYFNRM 277 Query: 267 FLRHVGCSPSDYRRQFK 283 F + G +PS YR Sbjct: 278 FKKKYGVTPSRYRETHN 294 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 13/274 (4%) Query: 17 GKTPRLSRFAFSDD--PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 G F D P++ +H H E E+I + +G T+D + A +D++ + Sbjct: 13 GTYEFPFEFHHIDHTHPRYVMSYHWH-VEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVH 71 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQ------GAEENQLLQPHSCPVIAAGQGKEVIK 128 G LH+ F G ++L + I Sbjct: 72 SGILHSGIPHD---CVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQIL 128 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN-FKNAYRSEQGYIKKDVLIKDILF 187 + L + + +++ F + +++ + F + K+ + +K +L Sbjct: 129 NCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLE 188 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 ++ NY ITL++LS S Y C F++ +P++Y+ ++R+ EA L T+ S Sbjct: 189 FIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDS 248 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 EI++R G+ ++ +F + F ++ G +P Y+R+ Sbjct: 249 ITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 115/295 (38%), Gaps = 15/295 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTID 59 + D + L + G + +SD K+ +G H H+ E E+I VK G +D Sbjct: 7 EIIVDENKQQLELFGTPMFPCKACYSDINKFVTGDISWHWHE-EIEVIRVKSGSIHLYLD 65 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 +S +V + D V I LH + + ++ + G ++ Q P++ Sbjct: 66 NSDFVLNEGDGVFINSNILHYIRAGTSEECILNSLVFNKNLISGGVQSVFEQNFVNPIVE 125 Query: 120 AGQGK-----------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNA 168 E +S+ + + ++ I+ Sbjct: 126 NKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYEILVREYLSHIWYIMLKNIQDLN 185 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 IK+IL +++ NY ++ITL ++K S F ISPI Y Sbjct: 186 LNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIAKVVNLSERECLRCFKNTLGISPIQY 245 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +++ R++ A L + IS VG+++ +F+K+F R +G +P+ YR + K Sbjct: 246 ILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKIFKRFIGITPTQYRNKSK 300 >UniRef50_C4ZAF9 2-isopropylmalate synthase n=2 Tax=Eubacterium RepID=C4ZAF9_EUBR3 Length = 292 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 13/272 (4%) Query: 21 RLSRFAFSDDPK-WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 S++ SD + ++ H HD E E+IYVK+G TI Y+ D V+ G LH Sbjct: 17 PFSQYHISDVKRAFQIPVHWHD-ELEIIYVKQGKLHVTISGENYIGSPKDAFVVSPGSLH 75 Query: 80 AVASDVNDPATT---CTCALYGFQFQGAEENQLLQPHSC-PVIAAGQGKEVIKTLFNELS 135 + S D FQ E +L P ++ + Q + + L Sbjct: 76 LMGSPTGDADYYTFLFPLEYISFQTDDLMEKSILSPLKRGRLMISPQINDTAADICERLI 135 Query: 136 VILPQ--SKNSQTSSLWDAFAY-----TLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 I Q KN++ + + A TL + ++N E G + K+++ Y Sbjct: 136 EINEQISGKNAEKTDAANIEAQFETKITLIKFIRKMWRNGLILENGTNGTNTTEKEMITY 195 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 + NY +I+L++ +F S YI F + + I+ YV R+ A+ L + S Sbjct: 196 IRQNYTREISLKEFGAQFHLSEKYISRYFKEHFHITLSQYVNHLRLEHARQLLEESTASV 255 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 E++ GY+NV +F + F + G SP YR Sbjct: 256 TEVAMCSGYQNVSYFIRSFKKMYGVSPLKYRN 287 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 13/280 (4%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 F+ + L V + + G V DN L ++ G +FTID Sbjct: 21 FNTNNFDLNVDHYGAEICA------KNYSFGPTVRDNYV-LHFIVDGKGKFTIDGITTQL 73 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEEN-QLLQPHSCPVIAAGQGK 124 D+ ++ +G++ +D P T G + + QLL + C + Sbjct: 74 KTGDMFILPKGKVAFYQADGEHPWTYLWVGFSGSKAENILSKTQLLDHYFC---HSTLES 130 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 +V+ + +L+ Q + T A Y L + F + S+ + ++ IK Sbjct: 131 KVLDQIV-KLTQFRDQKLDDVTELQLTAELYKLLAFLMKEFPSKAMSDSSILIQNY-IKQ 188 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 + ++ Y + + +++KK + SY+ F +E S +Y+IQ RM ++ LT T Sbjct: 189 VKKIIHTQYGNPLKISEIAKKLNLNRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRT 248 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 +EI+ VG+ + F+K F +H G SPS YR+ K Sbjct: 249 TFHISEIANAVGFPDALAFSKAFKKHFGQSPSHYRKALKK 288 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 12/257 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+ E E+ +K G + ID + D+++I LH+ + + + Sbjct: 11 HWHE-EMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSMVSDSLVFH 69 Query: 98 ----GFQFQGAEENQLLQP------HSCPVIAAGQ-GKEVIKTLFNELSVILPQSKNSQT 146 G+Q A + L P PV+ G G E +K F L + Sbjct: 70 LDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECFNGKQYGYE 129 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + +LY + G + +K++L Y+ +NYRE +T+E+LS Sbjct: 130 LYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLTIEELSSVC 189 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S ++ + F + ++ + Y+ R+T A L TE +I+ G+ N+ +F K+ Sbjct: 190 HFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFRNISYFNKV 249 Query: 267 FLRHVGCSPSDYRRQFK 283 F G +P YR+ + Sbjct: 250 FKERFGVTPGSYRKNSR 266 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 110/282 (39%), Gaps = 17/282 (6%) Query: 21 RLSRFAFSDDP-KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 + + P + H HD E E Y +G F +D+ + A + V I+ G +H Sbjct: 21 PFGTYWYRYGPGEHVIDCHWHD-EAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGGDIH 79 Query: 80 AVASDVNDPATTCTCALY-----GFQFQGAEENQLL----QPHSCPVIAAGQGKEVIKTL 130 A + + + + +EN +L + + P + + +L Sbjct: 80 AAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADL-SL 138 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYY-----ENFKNAYRSEQGYIKKDVLIKDI 185 + ++ + +L ++ S + K +K + Sbjct: 139 LEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLKTV 198 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 + ++ +NY I L +L+ S C F R +P++Y+ R+ +A L E Sbjct: 199 IQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLREPE 258 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 ++I+ VG++N+ +F ++F + + CSPS++R++ + Sbjct: 259 RKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQASVE 300 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 113/251 (45%), Gaps = 8/251 (3%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E + YV +G F I+ ++ + I G +H++ + + +T + Sbjct: 48 HWHD-EYQFSYVTQGEIYFYINDQTFILKEGQGIFINTGCMHSIKAVNDPESTYVCINID 106 Query: 98 GFQFQGAEENQLLQPH----SCPVIAAGQGKEVIKTLFNELSVILPQSKN---SQTSSLW 150 F + + + Q + + I +E N+L I + S + Sbjct: 107 KKLFSSFKGSVIEQKYLNTLTQSAIFLDLSEEWHIECINKLKDIYQFYVDKSFSFEIDIC 166 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 TLA++ + + IK IL +L+ +Y EKITLEQ+++ + Sbjct: 167 INLMQTLALVVKNALNPILLTTIESKDEYQKIKKILSFLHQHYAEKITLEQIAQHIFLNK 226 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 + C F ++ +++ Y+++ R+ ++ L +++ S ++I+ G+ V ++ F ++ Sbjct: 227 NECCRLFKRKTKMTIFEYLLEHRLNKSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKN 286 Query: 271 VGCSPSDYRRQ 281 VG +P++YR++ Sbjct: 287 VGITPNEYRKR 297 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 21/290 (7%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MY + + + R E +H HD E + G +F ID Sbjct: 5 MYDITEGDLNPEFLFTCVSTRTEE---------EQNYHAHD-FIEFAVIMGGKGKFYIDG 54 Query: 61 SLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 Y D +++ G H + + C A G F+G ++ Sbjct: 55 KDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIAFSGVSFKG-CKSGYFPSFKGNGKI 113 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK-- 177 + K +F +V+ +++ + AY + IL + ++G K Sbjct: 114 IKMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGY 173 Query: 178 ------KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 K +++ I+ Y+ NYREKI+LEQ++ S YI F E +PINY+I+ Sbjct: 174 IFQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIR 233 Query: 232 RRMTEAKWSLT-NTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 RM +AK L + E E++ VGY + HF+KLF +H G SP Y++ Sbjct: 234 LRMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IZS2_9BACL Length = 287 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 117/282 (41%), Gaps = 6/282 (2%) Query: 1 MYQRCFDNA-SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTID 59 M++ + A + L + L P G ++D L +V++G F + Sbjct: 1 MFKETYSAAANPDLIETDELHVLFAGESQTLPDHRLGPKIYDYFL-LHFVEQGKGTFRTE 59 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 S+ Y D +I +L + ASDV +P A G + + P PV Sbjct: 60 SASYELSEGDGFLILPDQLVSYASDVAEPWRYRWIAFTGVKAAELVKRVGFTPQQ-PVFR 118 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD 179 G + L + L Q+K + + L + + E A G Sbjct: 119 QGGNSPIPAMLSSVLQAF--QTKKNSSHLLSLGLLHQIMAEAQETLGMASALPSGESGVQ 176 Query: 180 VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 ++K ++ Y+ + Y +++EQ+ + +Y+ F KE +P+ Y+++ R+ +++ Sbjct: 177 RIVKQMIHYMASQYAHPVSIEQMCASLGYNRAYLSRIFKKETGFTPVTYLLKLRIDKSRQ 236 Query: 240 SLTN-TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L ELS +I+ VG + +F++ F R SPS+YRR Sbjct: 237 LLRERPELSIEQIAASVGLTDPLYFSRQFRRFHNESPSEYRR 278 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 5/239 (2%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G + I +D +IE G H A+ + P + +Y F G + Sbjct: 60 LIYCHEGEGWYNIGKGKCTVKKNDFFIIEAGTPHVYAASTSHPWS-----IYWIHFTGEQ 114 Query: 106 ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENF 165 + + + + + IL + + + L L Sbjct: 115 SHLFSELFNRTIYIDDSPTARFNDRIQLFNEILVNLEMGYSIENLEYITLCLWYLLGSFR 174 Query: 166 KNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISP 225 E K I+ ++ Y+ N +++TLE +++ S +Y+ FT++ +SP Sbjct: 175 YIPQFREINKPKTQDTIQKVINYMKANLDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSP 234 Query: 226 INYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 INY Q ++ +A L T+ EI++ + + + +F+K+F +++ SP +YR + K Sbjct: 235 INYFNQLKIQKACQLLDFTDKKAKEIAFELAFSDPYYFSKVFTKYMHMSPKEYRMKKKG 293 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 63/271 (23%), Positives = 111/271 (40%), Gaps = 16/271 (5%) Query: 21 RLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA 80 R+ F+ S D H+HD+ EL Y+ G + I Y A D+V ++R +H Sbjct: 23 RIGYFSMSAD-------HLHDH-YELYYLLSGERIYFIKDRSYRVRAGDLVFVDRNAVHK 74 Query: 81 VASDVNDPATTCTCALYGFQFQGA-----EENQLLQPH--SCPVIAAGQG-KEVIKTLFN 132 + F L +P P++ E ++ + Sbjct: 75 TLDSGRPDHDRLVLYINPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVERMVG 134 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 ++ + + + L L Y RS + ++ YLN+N Sbjct: 135 DMVNEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDN 194 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 YR+ +TL ++++ FR S Y+ F + + +Y+ R+ EA+ L ++ S +I+ Sbjct: 195 YRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIA 254 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 WR G+ N HF K+F R V SP YR+Q++ Sbjct: 255 WRSGFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1I4_CLOCE Length = 285 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 14/279 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 + C +N + TL A + + + H HD TE+ V G ++ ID L Sbjct: 5 EICAENFNPTLLYA--------YINMVNSESHVTLHTHD-YTEVKIVLSGYFKYIIDDKL 55 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ 122 Y +I++I G H L F+ EN L++P S PV Sbjct: 56 YEVAKGNIIIINPGVQHEKIIPSGVKVEEFNYGLTNIHFKELPENFLIEPSSLPVFTLPL 115 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG-----YIK 177 + I NE +++ + + A+L+ N R+E+ + Sbjct: 116 YQPEIIKCINETINEQEKNEPYCDLFIKSSIMKLTALLHRGMTANKERTEKTRLDIQTSE 175 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 K ++ DIL YL+ NY E+I+L +++ S YI F +E SPIN++I+ R+T+A Sbjct: 176 KTNIVNDILEYLSTNYMEQISLYRIAHNMYLSPVYISKIFKEETGESPINHLIRIRLTKA 235 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 + L + + ++ VGYE+ +F+KL+ ++ G PS Sbjct: 236 RELLMSGNMPIKTVARSVGYEDAFYFSKLYKKYYGIPPS 274 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 88/238 (36%), Gaps = 6/238 (2%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 + + V G F + + D+ +L +D P G Sbjct: 40 RDHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADEQQPWEYSWVGFNG-A 98 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 QL PV + L N S Q ++ +++ +A L Sbjct: 99 CAHKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQD--EAAMVGYLYLFIAAL 156 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 E +A + ++ + Y+ NY I+++ ++K S S++ F Sbjct: 157 MRET--SAGKPHTASSSSQYVLN-AIKYIQFNYSHDISIDDVAKSVGVSRSHLYRVFMLN 213 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 SPI+Y+ + R+ EA L LS AE++ VG+ + +F+++F R G PS Y Sbjct: 214 VGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPSKY 271 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 115/293 (39%), Gaps = 20/293 (6%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTI 58 Y D + L T + SGH H HD E + +++ +G A F I Sbjct: 4 YHFLIDYNLKELTEHSTTTWSIALYHTKICDHRSGHIPLHWHD-EFQFVFILEGEAEFHI 62 Query: 59 DSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 + D V I G LH +A D N T C F N+L P + Sbjct: 63 NEETICLKEGDGVFINCGCLH-MAKDANGTTCTYLCLNVSPHF--ITANELFTTFVHPYM 119 Query: 119 AAGQGK-----------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKN 167 A Q I + ++ ++ L L F+ Sbjct: 120 HASQTPYILLNRKDHWPNHIYQCIQTIQRLIDETPAYYELELNIQLITMWKCLLQNGFQI 179 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 Y + Q K+ +K +L +++ +Y EK+ L+ +++ + S S C F + +P++ Sbjct: 180 KYDARQHD--KNERMKPMLNWIHQHYHEKVLLQDIARAGQLSRSECCRYFKDILKKTPLH 237 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 YV + R+ ++ L T+ + EI+++VG+ + +F +F R +P YR+ Sbjct: 238 YVNEYRVQQSLILLQETDFNITEIAYKVGFNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 10/270 (3%) Query: 21 RLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA 80 R + SD P + +H H + E I + G ++++ Y + I ++H Sbjct: 24 RAKKSLLSDYPTMAAANHWH-TDWEFILLLNGKMSYSVNGKSYELQEGQAIFINSEQMHY 82 Query: 81 VASDVNDPATTCTCALYGFQFQGA---EENQLL---QPHSCPVIAAGQGKEVIKTLFNEL 134 S +E +L + S P + L L Sbjct: 83 GYSADGSDCNFICILFPPSLISSITRIKETYILPVCEDTSNPFFILHPEITWQRNLIELL 142 Query: 135 SVILP---QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNN 191 + + K+ + F LY + E KK + ++ Y+ Sbjct: 143 KNVYELCNEEKDGFELHVMSLFNTICFSLYNNIKDSISIQETADDKKLEAMHNMTGYIQK 202 Query: 192 NYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEI 251 NY+++ITL +++ S C F +P++Y+ + R+ ++ L + LS EI Sbjct: 203 NYQKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSYLTEYRLEKSIELLKISSLSVTEI 262 Query: 252 SWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 + + G+ +F ++F + +GC+PS YRR+ Sbjct: 263 ALQCGFTGSSYFTEIFHKTLGCTPSQYRRK 292 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 13/265 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H E E+ YV G AR+ ID + + A DI +I LH++ N P T T + Sbjct: 51 HWHP-ELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPHHTDTLHFH 109 Query: 98 ----GFQFQGAEENQLLQPHSCPVI-------AAGQGKEVIKTLFNELSVILPQSKNSQT 146 G + LQP + +G IK L ++ ++ Q + Sbjct: 110 LDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMIRQKERHYE 169 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 L + +LY+ S+ Y +K+ I++I+ Y+N +Y E +T+E+LS+ Sbjct: 170 LLLKSKLEELIYLLYFYRLVERKTSDDHY-RKNEKIREIIDYINQHYAENLTIEKLSELM 228 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S ++ F + S ++IQ R+ A L N+ EI+ VG+ N+ +F + Sbjct: 229 GYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNNLSNFNRQ 288 Query: 267 FLRHVGCSPSDYRRQFKNCFAEQEI 291 F + +PS YR+ N ++ Sbjct: 289 FKHYYDQTPSQYRKTHSNKKKTKKS 313 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 14/258 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H++ E+I +++G A F IDS Y AH D++ + G LH S + Sbjct: 40 HWHEH-FEIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIVYN 98 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKT-----------LFNELSVILPQSKNSQT 146 FQ ++ L + P + V T L + + + + Sbjct: 99 SSLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPAYQ 158 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSE--QGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 + L +L + + + Y+ K ++ Y+ N+ +K T+ ++ Sbjct: 159 LMVKSQLHMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADAAR 218 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + +V + C F K + I+YV R+ EA+ L +LS EI+ VG +N ++F Sbjct: 219 RMNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNYFT 278 Query: 265 KLFLRHVGCSPSDYRRQF 282 K++ ++ G +PS R+Q Sbjct: 279 KMYKKYKGVAPSQLRKQL 296 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 15/282 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 + F + + L K+ + W S H+H E+ ++ +G F ++ S Sbjct: 10 DKNFSDFNFELLYITKSKF--------ENDWHSTAHIHP-FMEIFFITEGNGSFQLEDST 60 Query: 63 YVAHADDIVVIERGRLHAVASDVN-DPATTCTCALYGFQ--FQGAEENQLLQPHSCPVIA 119 D+++I LH S++N P + F F + Q S Sbjct: 61 VNVKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHV 120 Query: 120 AGQGKEVIKTLFNELSVILPQ--SKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 K + N+L++I+ + KN + + + + + Sbjct: 121 INLKKNS-SIILNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKN 179 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 ++ I YL+++Y E ITLE LS + + H FTK+ +SPI+Y+I++R+TEA Sbjct: 180 LNLECAKIKNYLDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEA 239 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 K L T S +I VG+ N +F+++F + SP Y+ Sbjct: 240 KSLLETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 12/244 (4%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + +LIY+ G RF + + +VV G+ + D +Y F Sbjct: 66 DFQLIYITGGKGRFRFHNETIEVPSGSLVVYTPGQPQHYSYQAEDGTE-----VYWIHFT 120 Query: 103 GAEENQLLQPHSC---PVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAI 159 G LQ PV G + + LF ++ L S S + +A+ + Sbjct: 121 GYSAYDYLQQFGLLTQPVHTVGIIDD-VTALFKKIIQELN-SHRPLGSHMVNAYLLEMLT 178 Query: 160 LYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTK 219 L + A E G + I ++ +++ Y E +++ L+ + SV H+F + Sbjct: 179 LLGRRLQTA--EEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKE 236 Query: 220 EYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 ++P+ Y+ + R+ EAK L+ + L E++ VGY+N +F+++F VG PS+Y+ Sbjct: 237 VTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYK 296 Query: 280 RQFK 283 +QF+ Sbjct: 297 KQFQ 300 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 4/240 (1%) Query: 44 TELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG 103 + Y+ G F I+ Y + +I G + +D DP T G + Sbjct: 43 FLIHYIFSGKGSFEINGYTYNLESGQGFLISPGDIATYKADDKDPWTYAWVEFNG-RLSE 101 Query: 104 AEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYE 163 +Q+ PV + + K++++ F + +S+N+ L + + I +E Sbjct: 102 KFLHQIGLSSKTPVFSCKK-KDLLEASFQYIFDACKKSRNNNLLILSSLYHFLAMI--HE 158 Query: 164 NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRI 223 + KD I + ++ NY + + +++K + +Y+ F + I Sbjct: 159 ASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRNYMSTLFKESVGI 218 Query: 224 SPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +P Y+I RM +AK + N+ L+ EIS VGY + F+++F + G P +YR Sbjct: 219 TPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLFGIPPKNYRNSIN 278 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 120/289 (41%), Gaps = 23/289 (7%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 +D L++ +T LSR+ P ++ H HD+ E I + G + I+ V Sbjct: 22 YDETGIPLYI--QTGELSRY-----PDRKALCHWHDD-LEFIRIVHGEMNYYINGKNLVL 73 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 D +++ ++H +S + + ++ F + Q + P++ + + Sbjct: 74 KEHDGIMVNTRQMHYGSSINQNDCSFLCILVHPALFSSN--RLIYQKYLLPLLEDRETEF 131 Query: 126 V-----------IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 V I E++ + + + F Y + FK + G Sbjct: 132 VYLDSGRPDHGFILDCLMEMTQLKEHGEYGYELEIIGLF-YLIWRHLARQFKAGKTAAPG 190 Query: 175 YIKKDVLI-KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 D + KD++ ++ +Y EK+TL ++ S C F K SPI+++ R Sbjct: 191 IEDMDTKVQKDMVSFIYQHYTEKLTLSAIAASGGVCRSKCCQIFKKYLCQSPIDFLNSYR 250 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + + L T+ S EI+ G+ ++ ++++LF+RH GC+P +R Q Sbjct: 251 LEVSSHLLKKTDKSITEIATECGFNHLSYYSELFMRHYGCTPRQFRSQH 299 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 27 FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD-- 84 F +D + HH H++ E+IY+ +G + I+ Y DI++I G +H + Sbjct: 19 FFNDGYSNTPHHWHED-IEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFKEKK 77 Query: 85 -VNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV---IKTLFNELSVILPQ 140 N ++Y G ++ ++++P I G E+ ++ NE+ + Sbjct: 78 FSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEIINEYSK 137 Query: 141 SKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL--IKDILFYLNNNYREKIT 198 ++ + IL K +Y SE +K+ L + + Y++ NY+E+I Sbjct: 138 AEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNYQERID 197 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L+ +SK S Y F + ++ ++Y+ R+ +A+W + + + AEI++ G+ Sbjct: 198 LDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNCGFN 257 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQFKN 284 ++ F +LF VGC+P YRR KN Sbjct: 258 SIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450D3 Length = 285 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 11/257 (4%) Query: 36 GHHVHDNET----ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 HH+ + ET EL+Y +G + ++ A + + H +D P Sbjct: 34 THHI-ERETLAGHELVYCLRGSGTVRVAGRVHRVKARGLYWVSCWHPHQYQADPIQPWEL 92 Query: 92 CTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 + G LL+ PV K F + IL + +S+ Sbjct: 93 YWVRIEGPGLDALAS--LLRIRETPVFPLLDDAAT-KACFMDAFNILESPSPNAPASMHV 149 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 A A L++LY FK+ + + ++ L + +Y + + L L+ SVS Sbjct: 150 AVARLLSLLYENRFKDGGQDTEPVPS---TLERPLIRMRQHYADALRLSDLAHLAGMSVS 206 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 + F + SPI+++ + RM +AK L +T+ EI+ + GY + F+K F + Sbjct: 207 HFIRTFKRTMGTSPIDWLRRERMNQAKHRLIDTDEPIKEIARQCGYRDPYFFSKDFKKLT 266 Query: 272 GCSPSDYRRQFKNCFAE 288 G P+DYR Q + E Sbjct: 267 GLPPTDYRVQERGRAHE 283 >UniRef50_C9KMJ8 Methylphosphotriester-DNA alkyltransferase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMJ8_9FIRM Length = 283 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 117/278 (42%), Gaps = 18/278 (6%) Query: 19 TPRLSRFAFSDDPKWESGHH-----------VHDNETELIYVKKGVARFTIDSSLYVAHA 67 +P+ SRF P ES + H E+++++KG R + H Sbjct: 8 SPKQSRFEMGRRPHLESIENLNGATSFGTLKSHHEIAEILFIEKGHCRMHLKEGSLQLHT 67 Query: 68 DDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVI 127 DD++++ LH + + T T + G L + + V+ G+ I Sbjct: 68 DDLILVNSDTLHDFKTSSS--FTAFTIHIGALHLCGLAPGHLTKSEAPLVLPLGKDGRHI 125 Query: 128 --KTLFNELSVILP-QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 + L E+ ++ + ++ + + A A L I + +E+ Sbjct: 126 FLRQLLKEVKLLAALKGEDDERCEIGAALAQALVISVTALAEEDAGNEENPSFTMGT--R 183 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 I Y++ +Y E + L +++ ++ Y+ H F SP+ Y+I+RR+ EA+ L T Sbjct: 184 IKEYIDAHYLEDLKLADIAEALHINLYYLSHTFKDLTGSSPMQYIIRRRIEEAQTLLLTT 243 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++ +I+ + GY N ++F +F VG P YR+ + Sbjct: 244 NMTITDIAMQCGYNNSNYFQSVFSNIVGMPPGKYRKAW 281 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 110/285 (38%), Gaps = 17/285 (5%) Query: 12 TLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 ++++ + + H HD E + YV KG ++ YV + + Sbjct: 31 DCAFPVSMHTITKYDIFPNGRGFHDVHWHD-EIQFTYVSKGELTMQVEGREYVLKEGEAL 89 Query: 72 VIERGRLHAVASDVNDPATT---CTCALYGFQFQGAEENQLLQPH-------SCPVIAAG 121 I G +H S D L GF E + P+ C + Sbjct: 90 FINSGLIHVTTSISEDGQYEGFMFPEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRES 149 Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG----YIK 177 E I + L + +N ++ A + ++ + +N + Q Y++ Sbjct: 150 AEDEKILSDIRNLRELFNNKEN--VTAFEYEVAVRMTAIWLQIVRNVSDTMQKMPACYLQ 207 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 + +K ++ Y+ +Y E ITL+++++ S+ F + +P++Y+ R+ Sbjct: 208 RQERMKKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVG 267 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L T+L +I++RVG+ + +F + F + G +P YR Sbjct: 268 MELLRTTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRNHI 312 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 108/258 (41%), Gaps = 14/258 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD+ ELIY +G A F I S D++ + +G +H +D + Sbjct: 36 HWHDD-LELIYFIRGNATFYIGSETVKPEPGDLMFVNKGMIHTGFADDEHQVEYYALVFH 94 Query: 98 GFQFQ----GAEENQLLQPHS-----CPVIAA--GQGKEVIKTLFNELSVILPQSKNSQT 146 + G+ Q+ P++ P++ +I + ++ Q Sbjct: 95 SVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYNSLIAGIVKQMIAEYEQQAIGYQ 154 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD--VLIKDILFYLNNNYREKITLEQLSK 204 ++ L L + + + + K+++ ++ +Y EK+T++Q + Sbjct: 155 VAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAELTDRFKELIAFVERHYPEKLTVQQAAG 214 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 S + C F K + + YV R+ A+ L ++ EI+++VG+ +V++F+ Sbjct: 215 IVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLLIHSSDPITEIAFKVGFGSVNYFS 274 Query: 265 KLFLRHVGCSPSDYRRQF 282 ++F ++ SPS R+++ Sbjct: 275 QMFRQYKRHSPSQCRKRY 292 >UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IVE8_9BACL Length = 289 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 11/255 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 P G VHD L V +G +T Y D VI L +D DP Sbjct: 32 HPNHRIGPSVHDYFL-LHTVFEGKGTYTWGGQEYSCRTGDTFVIFPEGLFTYEADSLDPW 90 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 AL G + + P PV+++G+ +E ++ L+ L QS + SL Sbjct: 91 HYAWVALRGSGVLRQLADVGITPDK-PVVSSGEPEE-LRELYARLRSSFRQSDHPHLESL 148 Query: 150 W-----DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 + + E+ + E I D ++ + + Y ++I +E+L++ Sbjct: 149 EAAGWVTLLLHHFGVANREHLPRSAAKEPAMI--DRQVEQAIRWFQLQYPQQIGIEELAR 206 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 +++ F +SP Y+ + R+ +AK L L+ +I+ VG+ + +F+ Sbjct: 207 NLGYHRAHLFSAFKARTGLSPKQYLTKVRIEKAKELLAGP-LTIDQIASSVGFNDALYFS 265 Query: 265 KLFLRHVGCSPSDYR 279 + F + G SPS+YR Sbjct: 266 RQFKKSTGKSPSEYR 280 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 105/270 (38%), Gaps = 7/270 (2%) Query: 15 VAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 + + +++ + H HD EL Y+ +G I+ +Y A+D V+ Sbjct: 8 IISQGKKIAYAYAEGVNDNMTQSHFHD-FFELYYLLEGERMHMIEGEIYHLTANDFVLFP 66 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNEL 134 +H + + P QLL + G I +L L Sbjct: 67 PHIMHHSYGEKDMPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSL 126 Query: 135 SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYR 194 + + + + + L + +F+ + K + Y++N+Y Sbjct: 127 THEIDVPGKYHDAYICNQLNGLLLNMLRLDFEAVKSIPKTRSAK------AVDYIHNHYM 180 Query: 195 EKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWR 254 E I++ QL++ S ++CHEF + I Y+ R+ A+ + T+ + +IS Sbjct: 181 EDISVNQLAEILYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISRE 240 Query: 255 VGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 VG+ N+ HF + F + G +P + ++ ++ Sbjct: 241 VGFSNLTHFNRTFKKITGVAPREKKKLYQK 270 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 108/285 (37%), Gaps = 14/285 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDD---PKWESGHHVHDNETELIYVKKGVARFTIDS--- 60 D S +F L + F + P G ++ YV G D+ Sbjct: 2 DKLSFNIFPNVNFIDLCMYQFGHEQCEPGHSFGPATRNHYL-FHYVLSGTGTLMADNAKG 60 Query: 61 --SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 Y + +I G+++ +D P G + + A L + PV Sbjct: 61 ITQTYNIKSGQGFLIFPGQINTYIADDKLPWEYIWIEFDGLRVKEALTTTELTK-NNPVY 119 Query: 119 AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 K++ + L E+ I S + + + + Y + + G Sbjct: 120 HTH-SKDIREKLVEEMLYITRHPSESPYHLIGHMYLF---LDYLMQSAKSSKLVPGGKMS 175 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D IK+ + Y+ N++ I++E ++ + SY+ F SP +++ RM +A Sbjct: 176 DFYIKEAMNYIEQNFQNDISIEDIAGVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKAT 235 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 L T LS A++ VGYEN HF++ F G +P ++R + K Sbjct: 236 ELLKLTSLSIADVGSAVGYENQLHFSRAFKNIYGVAPREWRNEHK 280 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 15/279 (5%) Query: 16 AGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 G R+ + + ++ H H +E E IY++ G F I + + + + ++ Sbjct: 22 HGSAEYPFRYYYENIALFDFKCIDWHWH-SELEFIYIESGNVVFDIGTVHFELNEGNGIM 80 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVI----- 127 I LH + S + L+ F +++ + + + PVI++ V Sbjct: 81 INSKILHRLQSSSD---AIIPNFLFQPSFIAPQDSLIYKKYINPVISSSLEYLVFQPDIP 137 Query: 128 --KTLFNELSVILP-QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 K + I+ Q + L IL EN G + ++ Sbjct: 138 WQKKALEIIKTIIAVQETEFNREIIVSMSVQQLWILLLENLTFDQFENMGAVISRTRLQL 197 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ Y++ +Y E ITLE +++ S S H F +++P+ Y+I R+T+A L NT Sbjct: 198 MMQYVHAHYSENITLEDIARTANISKSTALHLFQNNLKLTPVKYLINYRLTQAALLLINT 257 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 E A IS G+ NVDHF + F + +P+DYR Q + Sbjct: 258 EEKIATISNNTGFNNVDHFCRTFKKTYKMTPTDYRNQER 296 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 13/254 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H++ E+I VKKG T+D Y A A + VV+ G+LH ++ ++ Sbjct: 84 HWHED-MEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAMEYENIIFL 142 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKT-------LFNELSVILPQ---SKNSQTS 147 AE + P+ G GK + T F E IL Q KN Sbjct: 143 PSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFMECIGILDQLCGKKNYAYQ 202 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + L + + K +K +L Y+ +Y EKIT+E ++ Sbjct: 203 MGVKGTLFWFLGLIAGIWGPEAAGQP--RKSRERMKRLLEYMEEHYGEKITVEDGAELCF 260 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 S S+ F + + I Y+ + R+ +A L T ++ R G++N+ +F +LF Sbjct: 261 YSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRLF 320 Query: 268 LRHVGCSPSDYRRQ 281 R G +P +YR+ Sbjct: 321 RRKYGKTPGEYRKN 334 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 66/290 (22%), Positives = 125/290 (43%), Gaps = 17/290 (5%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSL 62 ++ E + ++ +FS+ K G+ H HD E ++ V KG F + Sbjct: 8 LNDKLEDVSISKAYSFPFEVSFSEIRKLSKGYVKLHWHD-EIQISIVTKGSVEFIVGEKS 66 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ 122 Y+ + I R+H S ++ + + + Q + PVI + + Sbjct: 67 YILKNGQAIFINTQRIHMAKSVGDEDCIYHAIMFNAKLLKMFPGSIIEQKYIDPVITSNK 126 Query: 123 ------------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYR 170 ++ +K + + ++V + Q K + D + L ++ + + Sbjct: 127 LNSIEIYGNNNWEQDALKYISDIINVDIIQDKGYELKIYIDLLNFWLLLVLNDKDIFNQK 186 Query: 171 SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 E I + IKD+L +++ NY KITL+ ++ S C F K ++SP +Y+I Sbjct: 187 MEPKPINEQ-RIKDVLSFIHQNYSNKITLQDIADAVFVSKGECCRFFKKSLKMSPYDYLI 245 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 R+ E+ L N+ LS +IS VG+ NV H+ ++F + G +P +YR Sbjct: 246 NYRINESMKLLKNSSLSILDISENVGFNNVSHYIQIFKKKTGQTPLEYRN 295 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 17/259 (6%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTC 94 H H++ ELIYV+ G +TI + D++ + G LH+ AS + N+P T Sbjct: 32 PLHWHEH-FELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYAL 90 Query: 95 ALYGFQFQGAEENQLLQ---PHSCPVIAAGQGKEVIKTLFNELSV-------ILPQSKNS 144 ++ G +E ++ P++ + E +L+ L Q Sbjct: 91 -VFNPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRG 149 Query: 145 QTSSLWDAFAYTLAILYYENFKNAYRSE---QGYIKKDVLIKDILFYLNNNYREKITLEQ 201 ++ + L F RS+ + + K++L L ++ E++T+EQ Sbjct: 150 YELAVRS-YCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQ 208 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 + S + C F K + + Y+ R+ A++ L NT +S +I+ +G +++ Sbjct: 209 AASFVHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSIN 268 Query: 262 HFAKLFLRHVGCSPSDYRR 280 F+KLF + G SP D R+ Sbjct: 269 SFSKLFRQLRGVSPRDLRK 287 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 11/262 (4%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +S F +D W S H H + TE+ ++K G R I++ ++ +VVI H Sbjct: 23 ISASKFEND--WTSFPHSH-HFTEIFFIKDGTGRMLIENESLPVSSNSLVVIGAQVTHTE 79 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 SD +P + G + +E + + + A I+ F + + Sbjct: 80 FSDPENPLDYYVLGVEGLKLNTDKEPEYIH------VPASANSPFIRQCFENILREMHNK 133 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 ++ + ILY+ + + ++ +NY+ I+L+ Sbjct: 134 QDRYAEICQHYL--DILILYFCRKDHVSYEVVDAQNSSRECHKVKRFIEHNYQSMISLDS 191 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L++ S Y+ H F + Y SPI Y+ + R+ A+ L T S EI+ +G+ + Sbjct: 192 LAENCSLSKYYLSHRFAELYGKSPIAYLNEVRLASARDLLLTTNHSIEEIAGCIGFSSTS 251 Query: 262 HFAKLFLRHVGCSPSDYRRQFK 283 +F++ F ++ SP +R+ + Sbjct: 252 YFSQSFQKNFHESPQQFRKSHR 273 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 16/280 (5%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 + + K P + S P++ H H E E+I + G ID+ Y DI+ Sbjct: 11 VHGSTKFPFAYYYVNSYHPRYHMITHWH-KEYEIIRILSGTFNIKIDAVSYTVKTGDILF 69 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVI----- 127 + G +H+ T C ++ ++N L+ +I + +++ Sbjct: 70 LNSGAIHSGIPVD----CTYECLVFDIS-SLLQQNSLVNTELNALIHYKKKIQLLFDKKL 124 Query: 128 ---KTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD-VLIK 183 + N++ I+ KN ++ Y L ++ +N + KK IK Sbjct: 125 GAVYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRIK 184 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 +LF++ Y E I+LE ++K + + Y C F + + +P+ Y+ R+ A + Sbjct: 185 KVLFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIKF 244 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRH-VGCSPSDYRRQF 282 + S ++++ G+ + +F K+F ++ G +P +Y + + Sbjct: 245 FDSSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSKLY 284 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 16/257 (6%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E ELIY++ G ++ + A D++++ RG LH + +D+ + ++ Sbjct: 30 HWHD-EMELIYIESGSGLVRLNKEILRVKAGDLIIVNRGVLHGIKTDLKN-ILYFRSIVF 87 Query: 98 GFQFQGAEENQLLQPHSCPVI------------AAGQGKEVIKTLFNELSVILPQSKNSQ 145 F L Q ++ + I LF+ + + K Sbjct: 88 DLNFLSGPAGDLCQERVISLLMDNQAEFTHIISRSDDNYGNICLLFDRIHSCHKEKKPYY 147 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 L F + N+ +++ K IK IL Y+N NY + +T +L+ Sbjct: 148 FVKLKALFFSFFYEMLMGNY--ITPADKDENKSLASIKKILDYINLNYSQPLTAAELTAL 205 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S Y F + + I Y+ R+ +AK L +++ S EI+ VG+ N +F K Sbjct: 206 SNYSEYYFMKLFKQYTGKTLIAYINDLRIEKAKPMLLHSDSSVTEIALEVGFNNTSYFIK 265 Query: 266 LFLRHVGCSPSDYRRQF 282 F + G SP +RR Sbjct: 266 KFQQATGMSPHKFRRNL 282 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 8/265 (3%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 + S + NE L YV KG D Y +D +I + +D +DP T Sbjct: 37 YHSYGPISRNEYLLHYVIKGKGILKADGKTYHIGENDAFLIYPSEITYYEADKDDPWTYI 96 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD- 151 F G + L S E +TL + L+ +L SK + ++ L Sbjct: 97 WIG-----FDGMKAESCLINASFSKENRVSKFECGETLVHYLNGMLSASKLTYSNDLKRE 151 Query: 152 --AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 + + A++ + N+ + E V ++ L ++++NY ++I + +++ + Sbjct: 152 GYLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALDFISHNYEKQIKVIDIAEYIGIN 211 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 SY+ F K ++SP Y+++ R+ +A L NT+L EI+ VGY N F+K+F Sbjct: 212 RSYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLLVNEIARNVGYNNALTFSKVFKN 271 Query: 270 HVGCSPSDYRRQFKNCFAEQEILSE 294 + SP YR Q + + + Sbjct: 272 YYKMSPKTYRTQHQELVYSNKKHQK 296 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 107/274 (39%), Gaps = 11/274 (4%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P D + H H+ E E I + GV T+ + H + I G L Sbjct: 16 FPLQVYSHHDKDGFFSVSQHWHE-ELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGEL 74 Query: 79 HAVASDVNDPATTCTC--ALYGFQFQGAEENQLLQPHS--------CPVIAAGQGKEVIK 128 H + S + F ++ ++P + P + + + ++I Sbjct: 75 HEIKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMIL 134 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 E+ + + + S+ L + + + +K ++ Y Sbjct: 135 FHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEY 194 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 ++ NY I+L L+K S +Y CH F +E PI ++ + R+ +A LT++EL Sbjct: 195 IHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPV 254 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++++ VG++N +F + F + +P++YR Sbjct: 255 SQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + +V +G F + + Y +IE SD + P G Sbjct: 40 FYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTPATYISDEHHPWRYVWFGFSGRCAH 99 Query: 103 GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY 162 + L + P+ G ++ K +F+ L+ + L L+++ Sbjct: 100 DTLSSIGLT-QNQPIFTCEDGDKLKKYVFDMLAHNTSGHADHY--RLMGMLYLALSVI-- 154 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 NA + + + + + Y+ N+Y + +E+LS + SY F + Sbjct: 155 ---ANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSDLFKQYTG 211 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR--R 280 +SP+ Y+ R+T+A+ LT +ELS I++ GY++ + F K+F + G SP+ YR + Sbjct: 212 MSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSPNAYRLGK 271 Query: 281 QFKNCFAEQEILSEFPQPV 299 + + +++ + + P + Sbjct: 272 RQRTLSSQETMNNNRPDYI 290 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 113/275 (41%), Gaps = 15/275 (5%) Query: 16 AGKTPRLSRFAFSDDPKWE-SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 + P + + + H H E E +YV+ G I + + + I Sbjct: 24 SSDYPFQYYYDNLELFDFHCIEWHWHR-EFEFLYVESGEVTCGIGEKQIILSEGEAIFIN 82 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKT----- 129 LH + C +F E + + + + P+I++ + +T Sbjct: 83 SKILHRFYAPSGGIIPNFVCM---PEFIAPENSLIYKKYILPIISSNIYFQRFQTDELWQ 139 Query: 130 --LFNELSVILPQSKNSQTSSLWD-AFAYTLAILYYENFKNAYRSEQGYIKK--DVLIKD 184 + + I+ N + L A L + +YEN K + + + + + ++ Sbjct: 140 TKIIQTMIKIMEIQGNEKIRELATLALMQDLWLTFYENVKLSDKGDVQTVDEVAQKRVQL 199 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 I+ Y++ NY ++L++++ S S + F + +P+NY+I R+ A W L NT Sbjct: 200 IMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYLIGYRLQAASWLLKNT 259 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 I++ G+ NVD+F +LF + +PS+YR Sbjct: 260 NKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 7/249 (2%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 S H HD EL Y+++G I LY H + ++ +H N P Sbjct: 21 SKSHYHD-YFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRLLV 79 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFA 154 + + ++L+ + + K+V+ + ++L + + Sbjct: 80 YFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHTLLN 139 Query: 155 YTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYIC 214 L + +K I D++ Y++ NY+E I+++QL++ S Y+C Sbjct: 140 MALLTIARNI------QTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLC 193 Query: 215 HEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCS 274 EF + + I YV R+ A+ T + EIS G+ N+ HF ++F +G + Sbjct: 194 REFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMT 253 Query: 275 PSDYRRQFK 283 PS++R+ +K Sbjct: 254 PSNFRKMYK 262 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 15/262 (5%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 + H H +E E I V +G + S +V D+ ++ G LH++A+ P + Sbjct: 76 QQTVNLHWH-SEAEFIVVTRGSVCLQVGSERHVLADGDVALLSGGELHSMAAPGKGP-SE 133 Query: 92 CTCALYGFQF-QGAEENQLLQPHSCP-----------VIAAGQGKEVIKTLFNELSVILP 139 C ++G +G +++ Q + P + ++ + E+ L Sbjct: 134 CKAIVFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAIAHDHPVRQYLAARLCEIVEALE 193 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD-VLIKDILFYLNNNYREKIT 198 + ++ LA L+ + + + +K +L Y++ + +K+ Sbjct: 194 EQPVGYELAVKGCLYDVLAQLFRAELLVEHSPRREMDDRRADTLKAVLTYIDAHLSDKLR 253 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L L++ S + C F + P+ YV +RR+ A L + S I +G+ Sbjct: 254 LADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITAIGMDLGFH 313 Query: 259 NVDHFAKLFLRHVGCSPSDYRR 280 +V +F K+F + C+P YR+ Sbjct: 314 DVSYFIKVFRSYKHCTPLAYRK 335 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 7/261 (2%) Query: 24 RFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS 83 R A +D +S +H N E+ Y++ G + +Y ++++ +H Sbjct: 31 RIAGVNDNMMKSHYH---NYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYG 87 Query: 84 DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 + + P + E L ++ ++ + + EL + Sbjct: 88 ENDMPFKRIVLYFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSD 147 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 S L + + + R E +++ I+ Y++++Y+E ITLEQL+ Sbjct: 148 FYKSYRRT----LLNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLA 203 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 +KF S Y+C EF + + + YV R+ A+ L T+ + EIS G+ N+ HF Sbjct: 204 QKFYVSQFYLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHF 263 Query: 264 AKLFLRHVGCSPSDYRRQFKN 284 ++F G +PS YR+ +N Sbjct: 264 NRVFKSVTGTTPSGYRKHHQN 284 >UniRef50_C0WDW3 Predicted protein n=2 Tax=Acidaminococcus sp. D21 RepID=C0WDW3_9FIRM Length = 311 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 115/289 (39%), Gaps = 6/289 (2%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKW--ESGHHVHDNETELIYVKKGVARFTIDSSLYV 64 +NA E ++ + ++ F P H H E +L++V G + ++ + Sbjct: 25 ENAQEEIWYSQNEIPIAMFTQRYQPHLGDHIPIHWH-QEMQLLWVYDGTLSYRVNGMEFP 83 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK 124 ++ I LH+ + T C F A NQ L+P + + Sbjct: 84 LDRSQLLFINDSILHSSHPITTEVKTLCINFRKDI-FPSALWNQFLRPLTENPYCTYELI 142 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 + +L + +S F + E F+ + E ++ VL Sbjct: 143 NLNAQSLEKLGRFIHHVDDSTGLFSVTTFIMEVMEEIMETFEES--GEAKNTEERVLFDG 200 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 IL ++ +++ E +T+ QLS + + + F K + PI+++ R+ EA+ L + Sbjct: 201 ILSFIKDHFSESLTISQLSTAAHLNKNKLTALFQKYTGMPPIHFLNTYRLDEARTQLLKS 260 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILS 293 S +EIS VGY + HF + F + G +P YRR + EI S Sbjct: 261 ARSVSEISEDVGYGQISHFIQQFRKRYGMTPLQYRRTYSGRDERYEITS 309 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 116/271 (42%), Gaps = 17/271 (6%) Query: 25 FAFSDDPKWESGHH---VH-DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA 80 FA+ D W+ H H +E E +Y +G A I +S H + I G LH Sbjct: 30 FAYYPDNIWKFDFHRIDWHWHHELEFLYTAEGTALCLIGTSKIELHKGCGIFINSGVLHR 89 Query: 81 VASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIK----------TL 130 + + T ++ E + + + + PVI++ +V L Sbjct: 90 FEAQSS---TFAPNIVFSPTLLAPENSLIYEKYILPVISSSVPYQVFSPSNTFGKQVLQL 146 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 +++ I +++ ++ F + ++ + S K ++ ++ Y++ Sbjct: 147 LSQICTIQETKPDNELCTIQLLFQLWNILQKNMDWTSDSNSIHRLNHKQARLQAMMQYIH 206 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 ++Y E+ITLE ++ S S H F SP+ Y+IQ R+ +A L T+ S + Sbjct: 207 DHYMEEITLETIAASASISKSGALHIFQTGIHCSPVAYLIQYRLAQAAEQLYITQKSVSS 266 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 I+ G+ + +F + F ++ SP++YR++ Sbjct: 267 IAEETGFTSSGYFCRKFRQYYHMSPNEYRKR 297 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 108/274 (39%), Gaps = 14/274 (5%) Query: 25 FAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD 84 +S H H+ E E+I++ G + + +A D +VI LH ++ Sbjct: 32 SVYSSHAINRIPWHWHE-ELEVIFLPSGTLDVRVPGKRFRMNAGDCLVINSNILH--EAE 88 Query: 85 VNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA-----------GQGKEVIKTLFNE 133 ++ + + G++ + + + P+I++ I+ F Sbjct: 89 TSNECRLHSLVFHTDLISGSDSSVFYKKYMYPLISSCTLDCVLFSAEDTSGVSIRQCFMM 148 Query: 134 LSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNY 193 L ++ ++ + + +L + + IK+++ + + Y Sbjct: 149 AFDALANNREGYEFTVRECLSRLCFLLCTFYKPEISDTSAKPDQDSFRIKEMIHMIQSRY 208 Query: 194 REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISW 253 E + L +++ F + ISP+ Y+I+ R+++ L NT S AEIS Sbjct: 209 AEPLKLCDIAQAANIGERECLRCFHRTLGISPMQYLIRYRLSKGALLLINTNKSIAEIST 268 Query: 254 RVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 R G+++ +F+ F R CSP +YR+ K + Sbjct: 269 RCGFDSPSNFSLTFKRKYQCSPREYRKNNKTLLS 302 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 11/262 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 P G + D+ + Y+ +G F ++ LY H + +I + +D + P Sbjct: 31 TPSHSFGPAIRDHFL-IHYIIEGSGTFLVNGKLYKLHKNQGFIIFPDDITYYEADNHTPW 89 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSV--ILPQSKNSQTS 147 G + + + L + P+ K ++ F+ + L + + Sbjct: 90 IYKWVGFKGIKAEYYLQCAGLTKEN-PIFEYSNDK-FLEECFDNMIKASKLKYASELKLQ 147 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 L F L L + + Y KDV IK L Y+ NY K+ + +++ Sbjct: 148 GLLSIFLSELIELSSIDSSSDY------YYKDVYIKKCLNYIEMNYSRKLLISEIAALLG 201 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + Y F + ++P Y+I R+ +A + N +LS +IS VGY++ F+K+F Sbjct: 202 LNTKYFSLIFKESIGVTPQQYIISFRVNKACELMKNFKLSICDISRSVGYDDSLAFSKIF 261 Query: 268 LRHVGCSPSDYRRQFKNCFAEQ 289 + G SP YR QF N ++ Sbjct: 262 KKQKGMSPKKYREQFINSNSKN 283 >UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=Leuconostoc mesenteroides RepID=Q03WL4_LEUMM Length = 309 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 11/307 (3%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFT 57 M + F+ +E + F FS K SGH + + L +V +G + Sbjct: 1 MEKSLFNIVNEHTLESSIF-----FDFSGVSKTFSGHASGPLKRSHYLLHFVLEGQGTYF 55 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 + Y A D +I +D+N+P ++ G + EN + Sbjct: 56 TMNHKYTLKAGDFFLIRPDETIFYQADLNNPWHYAWISIGGTETAQLIENFSPFRNHHDT 115 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 + + +K + L++ + + L + L +L EN N + I+ Sbjct: 116 FSCATVENYLKLIVESLTLTSHRPQ--TELRLNQIASEILLLLMKENTWNVVEHQNATIR 173 Query: 178 -KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 K L Y+NNN+ ++ ++ + + SY+ F ++ ISP ++++ R+ E Sbjct: 174 PMSEYTKLSLAYINNNFTYDTSITDIADAIKINRSYLSRLFRRDVGISPKKFLLRLRINE 233 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFP 296 A L T+LS +IS +VG+ N F F + +PS YR++ +++ E+ Sbjct: 234 ACQLLQTTQLSINQISEKVGFSNPSVFGHSFTELIHETPSAYRKRRSFNNIQEQHSLEWQ 293 Query: 297 QPVSLVG 303 Q ++G Sbjct: 294 QINDILG 300 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 100/253 (39%), Gaps = 7/253 (2%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSL--YVAHADDIVVIERGRLHAVASDVNDPAT 90 W + Y+ G F + ++ + + +D +DP T Sbjct: 30 WHHYGPTLTHNYLFHYILSGRGSFLENERHEAIQLGPGQGFLMPPNTVCSYTADQDDPWT 89 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 C G + L + +I +I ++ + L I+ +N + Sbjct: 90 YCWIEFNGLKAANFMRQAGLN--ANNLIFTPHKPMIISSIKDTLETII---RNHSQHESF 144 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 L + + F ++ I++ + Y+ ++Y + +++QL+ + Sbjct: 145 LIAQLYLLVDHLIRFSKHSPQQRPNEIHSFYIREAIHYIQDHYMDNPSVDQLADICHLNR 204 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 +Y F +E ++P +++ R+ ++ L +T S +I+ ++GY N +F+ F R Sbjct: 205 NYFTRLFKQELHMTPSQFILTYRINQSCELLASTNRSIRDIADQIGYSNQFNFSSAFKRV 264 Query: 271 VGCSPSDYRRQFK 283 G +P ++RR+++ Sbjct: 265 KGMTPMEWRRRYR 277 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 105/267 (39%), Gaps = 3/267 (1%) Query: 21 RLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA 80 L + + HD+ LIY G ID + DI++I +G H Sbjct: 37 PLGMGYYRQASGHQMERQEHDDNL-LIYCLDGEGEAVIDGQKTRIRSGDILLIPKGVSHT 95 Query: 81 VASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQ 140 + P T +G + ++ LQ + L ++ +L Sbjct: 96 YQARKRKPWTIYWVHFHGHHAEDFAQH--LQQRESNQRRYVMPIGIHSRLASDFEALLEA 153 Query: 141 SKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLE 200 +++ + + A L + ++Q + + I+ + + + E++ L+ Sbjct: 154 RESTYNLNAYICAANQLRQILSHIALLQPLAKQKQSRGGLDIERVHSLMQTHIHEQLDLD 213 Query: 201 QLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENV 260 L++ S + ++ + +PIN+ IQ ++ A L T E+++ VGYE+ Sbjct: 214 TLAESISLSKYHFVKKYKEVTGTTPINHFIQLKIERACHLLDTTNNGINEVAFAVGYEDA 273 Query: 261 DHFAKLFLRHVGCSPSDYRRQFKNCFA 287 +F+++F + +G SPS YR+ F Sbjct: 274 YYFSRIFKKLMGVSPSQYRKMRTGAFP 300 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 183 bits (466), Expect = 4e-45, Method: Composition-based stats. Identities = 75/288 (26%), Positives = 114/288 (39%), Gaps = 19/288 (6%) Query: 5 CFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYV 64 F SE LF R F S + H+H + EL Y+ G ++ I Y Sbjct: 7 LFYGDSEDLFFLEYNKRKGHFTMSVE-------HIH-GQYELYYLFSGERQYFIKDRKYP 58 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALYG---FQFQGAEENQLLQP----HSCPV 117 A D+V+I LH SD P Y F+ G EE++LL Sbjct: 59 IAAGDLVLIPANELHKT-SDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGSRRVF 117 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 A Q + + L L + + + A A L N G + Sbjct: 118 RLAHQERLRFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSDGSVP 177 Query: 178 KDVLIK---DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 +I Y+ +++RE +TL+ LS++F S SY+ F K Y+ R+ Sbjct: 178 PSPAAAKAMEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIGITRV 237 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 EA+ L T+ EI+ VG+E++ F ++F H+ SP DYR Q+ Sbjct: 238 KEAQHQLRETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQY 285 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 14/253 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E E+I +KKG ++D + Y A DI+ + G+LHA++ N+ Sbjct: 44 HWHD-EVEIIVIKKGSGIVSVDLTTYSVSAGDIIFVLPGQLHAISQKDNEIMEYENILFK 102 Query: 98 GFQFQGA----EENQLLQP------HSCPVIAAGQGK-EVIKTLFNELSVILPQSKNSQT 146 + + ++ +QP + CPVI + T NE+ + + Sbjct: 103 SSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQ 162 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 S+ L L +N + K IK IL Y+ NN++E I +E ++ Sbjct: 163 LSIKAHLFQILYTLVSNCGQNKIKPINQKSLKK--IKTILSYIANNFQENIAIEDIANYC 220 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S SY F + +S I Y+ R+ A LT T + +I++ G+ N+ +F + Sbjct: 221 FYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRC 280 Query: 267 FLRHVGCSPSDYR 279 F + G SP YR Sbjct: 281 FKKKYGVSPRKYR 293 >UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales RepID=Q64XT7_BACFR Length = 318 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 10/240 (4%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 IY +G F++D + + ++ G HA +D +P T +Y F G Sbjct: 80 FIYCTEGRGWFSLDGQKHPVVPNQYFILPAGLPHAYGADEKEPWT-----IYWIHFGGTL 134 Query: 106 ENQLLQPHSCPV--IAAGQGKEVIK--TLFNELSVILPQSKNSQTSSLWDA-FAYTLAIL 160 +C + I G + LF E+ +L + + S + F + L L Sbjct: 135 APLYCTHRTCRLTDIKPGMHSRISYRTELFEEIFRVLKMGYSLENLSYASSVFHHYLGSL 194 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 Y SE ++ + + Y+ N +K+TL +L+ S SY + F K Sbjct: 195 RYLREYREAFSEHRPAGEEDPVNAAIHYMKENLGKKLTLAELADYTGYSSSYFSNLFLKR 254 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +P++Y Q ++ +A L T++ ++ +RVG E+ +F++LF + +G SP +Y++ Sbjct: 255 TGYAPLSYFNQIKIQKACQFLDFTDMKVNQVCYRVGIEDAYYFSRLFSQIMGMSPREYKK 314 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 75/300 (25%), Positives = 121/300 (40%), Gaps = 24/300 (8%) Query: 11 ETLFVAGKTPRLSRFAF--SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + + G F + SD HH HD + ELI++KKG + ID +V H + Sbjct: 7 KEIKKHGTAYFPCAFYYTESDSENLIVKHHWHD-QLELIHMKKGEFQVEIDMDKHVVHEE 65 Query: 69 DIVVIERGRLHAVAS--DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA----AGQ 122 I I LH + S + A + F + + L+QP + + Sbjct: 66 TICFINSEELHFIKSNHPCKESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFIFK 125 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSL---------------WDAFAYTLAILYYENFKN 167 + + + E S IL K S S A + + YEN Sbjct: 126 KDKHGEEILKEYSEILEAYKISGQISQNPEGNITEKLSSQIKIKASLLKILAILYENNLL 185 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 + + + IK + Y+ NNY EKI ++ LSK+ + Y C F + +P+ Sbjct: 186 IKENNKNKDYRVEYIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKTPME 245 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 YV + R+ +AK L T +I G+ N+ +F K+F +H G +P YR+ F N + Sbjct: 246 YVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKNFINKKS 305 >UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDN8_9FIRM Length = 301 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 108/292 (36%), Gaps = 15/292 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWE---SGHHVHDNETELIYVKKGVARFT 57 M + D + L G D +E H H N+ E+ ++G A + Sbjct: 3 MRKILVDETNRELCEHGTVGFPMTVNHDDLWAFEGKSVPIHWH-NDLEISLPREGEAIYQ 61 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATT--------CTCALYGFQFQGAEENQL 109 + Y D++++ R H+ S N A C YG + Sbjct: 62 VYRKSYTVRPGDVLLLNRNVPHSCHSPNNSHARYSTFLTRPDFICGEYGSDVERRCFRPF 121 Query: 110 LQPHSCPVIAAGQGKEVIKTLFNELSV---ILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 LQ + P I +T+ +L+ + Q + ++ E+ Sbjct: 122 LQNSAVPCILLTSESSCTRTVIQKLNETEALFDQKTFCYELKIKGLLCEIFGMILCEHQN 181 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 + + + ++ +L YLN ++ I+L++L+ + S C F K + Sbjct: 182 DLAKFIPANQLELERLEQMLDYLNTHFGSVISLQELADQVHLSREVCCRLFKKMTGKTIT 241 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 Y+ + R+ ++ + + + S +I+ G+ N FA+ F R GC+P +Y Sbjct: 242 GYLEEYRVNQSLPLVQSCQYSMIQIADMTGFSNASRFARAFRRQFGCNPGEY 293 >UniRef50_A6KYC9 Transcriptional regulator n=5 Tax=Bacteroides RepID=A6KYC9_BACV8 Length = 298 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 11/247 (4%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 E LIY +G F +D Y A+ ++ + HA S+ +P T +Y F Sbjct: 58 EFILIYCMEGEGWFELDKHQYAVTANQFFILPEHQAHAYGSNEENPWT-----IYWIHFN 112 Query: 103 GAEENQLLQPHSCPVIAAGQGKEVIKT---LFNEL--SVILPQSKNSQTSSLWDAFAYTL 157 G + P Q IK LF E+ S+ SKN + F + Sbjct: 113 GTKAAFFSAGFDRPKSITPQEDSRIKERLVLFEEIYSSISFGYSKNYMLYATTSLFHFLG 172 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 ++ + +++ Y KD +++ + ++ N + I L ++ + SVSY + F Sbjct: 173 SMKFIGEYRDCGSMRNSYRNKD-VVQIAIHFMQENLSKTIRLADIAAEVNLSVSYFSNLF 231 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 ++ SP+ Y+ R+ EA L T L +IS VGYE+ +F++LF + +G PS Sbjct: 232 EEKTGSSPLRYLTYLRIQEACHYLDFTNLKINQISPLVGYEDSLYFSRLFTKTMGVPPSA 291 Query: 278 YRRQFKN 284 Y+ + K Sbjct: 292 YKEKKKG 298 >UniRef50_B1R1I5 Transcriptional regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1R1I5_CLOBU Length = 284 Score = 183 bits (464), Expect = 8e-45, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 8/254 (3%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS--DVNDPAT 90 +E +H HD E YV G + ID Y+ ++ G H +N Sbjct: 27 FEGNYHCHD-FIEFSYVVSGNVNYKIDDKFYLIKEKTLLPFNAGVYHHEYFTKGINSNLK 85 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 + G N +L+ S + Q E E+ S+ + L Sbjct: 86 ELHVGFRNLKIDGLPLNHILKNSSTVPMQFNQYGEDFHKCCLEIIEEHECSEIGKELVLK 145 Query: 151 DAFAYTLAILYYE-----NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 +A+ E N K + + K +++ I+ Y NY I+L +SK Sbjct: 146 SLVMKLIALFLKETNYVKNTKKIKQYSLPFYDKSNIVEIIIDYFEKNYMNNISLNDISKN 205 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S YI F ++ SPINY+I R+ +AK L TE+ I+ VGY + +F+K Sbjct: 206 MYISSVYISKTFKEKTGESPINYLINLRLQKAKDLLLETEMPVKIIAQSVGYSDAYYFSK 265 Query: 266 LFLRHVGCSPSDYR 279 LF ++ SP+ YR Sbjct: 266 LFKKYYEYSPNKYR 279 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 7/266 (2%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P G N L YV KG + + + Y +IE L +D DP + Sbjct: 29 PLHSYGPAARPNYI-LHYVMKGKGIYQVGETKYPLKEGQAFLIEPESLTFYQADKTDPWS 87 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 G + Q + L G+E+ + +F L ++N Sbjct: 88 YLWVGFGGTEAQRFVRDLGLNSRQL-TCECEYGEELKEIVFEMLHHTCSTAEN---LYYL 143 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 Y + + S K+ + +++ + Y+ N Y +KIT+E ++ + Sbjct: 144 QGKLYQFFSVLARGIEIQQYS--NDTKESIHVQEAIAYIKNYYSQKITVEDIANYLALNR 201 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 SY+ F ISP ++ + R++ K L T+LS EI+ GY N F K+F + Sbjct: 202 SYLYTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKVFKQK 261 Query: 271 VGCSPSDYRRQFKNCFAEQEILSEFP 296 +G +P+ YR + E+ I ++ Sbjct: 262 MGMTPTQYRNDNRKAARERLISAQNE 287 >UniRef50_D1PN84 Putative msm operon regulatory protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN84_9FIRM Length = 297 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 10/251 (3%) Query: 36 GHHVHDNE--TELI-YVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 GHH +LI ++ G ID + A D +I G++ A+D DP Sbjct: 51 GHHYGPIYRAYQLIHFILSGKGVLEIDGHTFQLGAGDAFLIPSGKIAYYAADAADPWCYT 110 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 G Q QL+ P I G + L ++ + + + T+ + Sbjct: 111 WINFLGINSQ-MYTYQLIASSPEPYILRGLDTQKYHALIEQILSL----EGTATARYFKG 165 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 L +L E F++A E+ Y K+ + + FYL+ NY EK+ L++++ +Y Sbjct: 166 NGLLLQVLG-ELFQDAGFDER-YWGKNSVADETKFYLDVNYSEKLKLKEVAHNLGVHPNY 223 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + F ++Y ++P Y++ ++ +A L T+L A I+ +G+++ F+KLF + Sbjct: 224 LTRVFHEKYGVTPKQYLLNLKLQKACQLLRTTDLPVAVIAGSMGFDDGMAFSKLFKKTYS 283 Query: 273 CSPSDYRRQFK 283 C+PSDYRR+ K Sbjct: 284 CAPSDYRRKEK 294 >UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C08 Length = 288 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 96/249 (38%), Gaps = 3/249 (1%) Query: 42 NETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQF 101 + + +V G F A D +IE L +D +P A G Sbjct: 42 DYYLMHHVISGKGIFMYRGKELELKAGDTFLIEPEELVRYEADQVNPWMYRWVAFQGKGV 101 Query: 102 QGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILY 161 A E C V + LF+ + +L K L Sbjct: 102 PEALEKTGFSSSRCIVHTRDNQN--VSELFSTILSVLQDKKEGAHQKALGYLYVLFGELC 159 Query: 162 YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEY 221 + + + ++ + YL+ Y E I++E ++ + +Y+ F +E Sbjct: 160 EAIYPKTGIGMRTSSESGRTVQKAIHYLSTQYAEDISIETMADNLGYNRAYLSRIFKQET 219 Query: 222 RISPINYVIQRRMTEAKWSLTNT-ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ++P+ ++++ R+ +A++ L EL+ +I+ VG+ + +F+K F R C+P++YR Sbjct: 220 GLTPVTFLLKLRIDKARFLLRQRMELTIEQIASSVGFHDPLYFSKQFKRFYKCAPTEYRD 279 Query: 281 QFKNCFAEQ 289 K+ E Sbjct: 280 SIKHIRKEN 288 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 13/253 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+ E + V KG A F +D + + I LH+ S + + + Sbjct: 37 HWHEG-FEYLTVTKGRAVFKVDDLEIEVSKGEGIFINSNVLHSAHSINEEECSFFAVVCH 95 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEV-----------IKTLFNELSVILPQSKNSQT 146 + + Q P++ + I L ++ I + + Sbjct: 96 PAFLSSYINDCINQRFINPILNHSLYFPIHLKKDVDWQRNILLLLTQVYDINKEKEFGYE 155 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 L + Y + +N K + K +K +L Y++ NY KI + + + Sbjct: 156 L-LLKSKIYEIWFECIKNAKKSINKGSNTSYKTERMKVVLNYIHENYFNKIVVSEFASLV 214 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S + C F + ++YV + R+ + L+ T +EI+ VG+ ++ +F K+ Sbjct: 215 HMSDEHFCRFFKAMTHFTLVSYVNRYRIERSCVFLSQTNKKISEIAGDVGFGDISYFNKV 274 Query: 267 FLRHVGCSPSDYR 279 F + +GC+P DYR Sbjct: 275 FRKIMGCTPVDYR 287 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 102/241 (42%), Gaps = 7/241 (2%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + Y+ G F +D+ Y HA +I +D P + G Sbjct: 40 YYLIHYILSGSGIFKVDNVTYHLHAGQGFLIVPNCRTTYIADKETPWSYVWLGFTGKSAA 99 Query: 103 GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY 162 +Q+ PV + + E + NE+ + S + +L F + L Y Sbjct: 100 TWI-DQINISEIRPVFNSNKSYE-LANCVNEILALDNLSMENNLRALSCFFRF----LSY 153 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 +Q +K+ + + Y++++ K+T+E L+ + SY+ F + Sbjct: 154 IATGTVINIQQANSEKNHYVTQAIQYISHHLS-KVTVESLAHAVNLNRSYLTSLFKHDLD 212 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++P Y+ R+T+A+ L ++++S +++ + GY+ + F ++F R G SP YR++ Sbjct: 213 LTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTYGISPRQYRQET 272 Query: 283 K 283 K Sbjct: 273 K 273 >UniRef50_A6LD39 Transcriptional regulator n=3 Tax=Bacteroidales RepID=A6LD39_PARD8 Length = 297 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 9/241 (3%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 E LIY KG + +D YV + ++ + H S +DP +Y F+ Sbjct: 57 EYLLIYCTKGEGWYVLDGKRYVVPENHFFILPAEKPHQYGSSEHDPWY-----IYWAHFK 111 Query: 103 GAEENQLLQPHSCPV-IAAGQGKEVIKTL--FNELSVILPQSKNSQTSSLWDA-FAYTLA 158 G + + + I + + F+EL +L + T + + F + +A Sbjct: 112 GKKAKYISDQLQGVIPIDMDDNSRIGDRIAFFDELLNVLESGTDEATVNYVNLSFNHLIA 171 Query: 159 ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 Y + + + I ++ N K+TL++L+ F S SY+ F Sbjct: 172 SFLYVKTYREAKFSKSKAENTFFISLATHFMTENLENKLTLKELASHFGYSESYMYRLFF 231 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 KE +P+NY + ++ A L +T + +++ ++G+++ +F+++F + VG SP DY Sbjct: 232 KETGYAPMNYFLHMKIDRACQLLLHTNMKINQVALKLGFDDPYYFSRIFKKIVGTSPKDY 291 Query: 279 R 279 R Sbjct: 292 R 292 >UniRef50_C4FXH3 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXH3_9FIRM Length = 298 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 105/269 (39%), Gaps = 12/269 (4%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 S D W S H H N E+ Y G + H ++++ H + + Sbjct: 28 SYDANWHSTMH-HHNFAEIFYCLDGSGYLLTEFGRTPIHKHSLLLVNPFIEHTEHTSLIS 86 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCP--VIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 P + G + +L H+ + + L E+ ++ Sbjct: 87 PLKYLVIGIKGPEI-------ILPSHATDNGLFSFEDSNHQFYRLIREVMTECELNQPYS 139 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 + + IL N N+ + + Y++N++ + I LEQL ++ Sbjct: 140 SQIIDHLINSL--ILRLNNLANSQLAMARETPLSASVSLAKHYIDNHFSKNINLEQLEER 197 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S ++ H+F +E +SPINY+ Q R+T+A+ L T + +I+ VG+ +V +F+ Sbjct: 198 AHVSRFHLAHQFKEELGLSPINYLNQVRLTQAQELLLTTNYTVLQITEMVGFNSVSYFSN 257 Query: 266 LFLRHVGCSPSDYRRQFKNCFAEQEILSE 294 F VG +P YR + + L E Sbjct: 258 KFHEAVGMTPRAYRNLHASSLIQTRSLKE 286 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 9/276 (3%) Query: 12 TLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 T+ + +E +H H E+ Y+ G + I LY A D++ Sbjct: 9 TVSYGEEEGEFYYHRIHRTKPFERNNHYHGT-YEIYYLVSGERHYFIKEKLYSIRAGDLI 67 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQL------LQPHSCPVIAAGQGKE 125 +I + +H + DP + F G L + P++ ++ Sbjct: 68 LINKFDVHKTSGH-GDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQ 126 Query: 126 -VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 +I + N+++ + + S L L Y + + I D Sbjct: 127 AIIMQILNKMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITD 186 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ +++ +Y +KITL+ LS+ F S Y+ F + + INY+ R+ EA+ LT+T Sbjct: 187 VVKFIHVHYADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDT 246 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +L +I+ +G+E++ HF + F + + + S YR+ Sbjct: 247 DLKIVDIAESIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSG8_9BACE Length = 281 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 55/269 (20%), Positives = 105/269 (39%), Gaps = 11/269 (4%) Query: 15 VAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 + L + W S H H E+ Y+ G F +D D ++I Sbjct: 14 FPPQGRLLYLSTSVYEEDWASVVHSHPI-AEIFYIINGRGVFMVDGVHRSVKQYDCLIIA 72 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNEL 134 H + P + G L + + + N + Sbjct: 73 PNTPHTEKAFPGQPMEYVVLGVDGLTLSDEHGKYFLDTF-------EEYNDELLNYLNLM 125 Query: 135 SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD---ILFYLNN 191 + T+ + L +++ ++ + Q K + + + Y++ Sbjct: 126 LKESQHEQFGSTAICQHLLSVLLLLVHRKSGLHLVADIQPTSKAQEVPPECGRVKNYIDY 185 Query: 192 NYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEI 251 Y + ITL L++ Y+ H FTK Y +SP+NY+I++R+ AK L N++ + AEI Sbjct: 186 YYSDNITLALLARIAGWDRFYLSHAFTKAYGLSPMNYLIKKRLDCAKELLKNSDHTIAEI 245 Query: 252 SWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 S +G+ + ++F + F R VG + ++YR+ Sbjct: 246 SQMLGFSSQNYFTQTFKRKVGITATEYRK 274 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 105/256 (41%), Gaps = 12/256 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H E + Y I+ + + ++I LH + N + Sbjct: 46 HWH-KEVQFSYSLYDKVVVFIEDEEIILSPGEGIMINSNVLHQIKPYKNIDCMMFSIDFD 104 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEV-----------IKTLFNELSVILPQSKNSQT 146 G+EE+ + + + P+I + K + I + ++ ++ + Sbjct: 105 STLIGGSEESLIEKKYLSPIIESNNLKFISLKPDVPWQKRILSHLEQVFILSHEKSYGYE 164 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + + + L E ++ S D +K + Y+ +Y + I L+ +++ Sbjct: 165 LEMKNYLSIVWLNLIKEIKEDIKISMPSASNDDERVKMAMQYIQKHYADNIDLDSIARAA 224 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S S C F + +++P Y+++ R+++A L + S + IS VG+ + +F K+ Sbjct: 225 NISKSECCRSFKRILKVTPFEYLMEYRVSKAAELLLKNKDSISNISLDVGFNGISYFGKV 284 Query: 267 FLRHVGCSPSDYRRQF 282 F ++ CSPS+YR ++ Sbjct: 285 FKKYRNCSPSEYRTKY 300 >UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium perfringens RepID=B1BNT9_CLOPE Length = 285 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 12/261 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARF------TIDSSLYVAHADDIVVIERGRLHAVAS 83 DP G V N YV G +F T + Y + +I + + S Sbjct: 28 DPLHSVGPTV-KNNYLFHYVISGKGKFFSVDPKTFEKKYYEVSPGEGFLICPNEICSYQS 86 Query: 84 DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 D NDP G + + E L P + P+ + +K + E+ I+ +K Sbjct: 87 DENDPWHYMWIEFNGIKAKLYMEEAGLTP-ANPIFKLKESINSLK-IIEEMKSIISNNKK 144 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + + + + + +++ F + ++ I++ L ++ NY I++E +S Sbjct: 145 NPSFLIGHLYLFINSLI---EFSLNSTLNELDTLNELYIREALNFIEENYNRNISVEDVS 201 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + S SY F K +P ++IQ +M +A L + LS ++++ +GY N +F Sbjct: 202 NRCNLSKSYFTRIFKKHMNTTPQEFLIQYKMLQACNLLKDKSLSISQVAELLGYSNQFNF 261 Query: 264 AKLFLRHVGCSPSDYRRQFKN 284 + F + SPS +R F N Sbjct: 262 SVAFKKKFNLSPSKWRTTFIN 282 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 103/264 (39%), Gaps = 7/264 (2%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARF--TIDSSLYVAHADDIVVIERGRLH 79 +F S Y+ G F T D Y A +I + Sbjct: 20 PIQFGMEACKPLHSFGPTMKQHYLFHYIISGSGTFYDTSDQREYHLTAGQGFLISPDAIC 79 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 + +D DP T G + + L I + + +++E+ IL Sbjct: 80 SYEADEKDPWTYIWLEFDGLKTEHFLRQAGLSKEQ--PIFSQREMPTSSPVYHEMKQILA 137 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 L + + ++ K + + ++ K+ I++ + ++ NY + I++ Sbjct: 138 LHHQKSALVLGHLYLFISCLIDCSLTKTSSKHDEN---KEFYIREAINFVERNYEKAISV 194 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 + L++ + Y F ++ ISP ++IQ R++EA L NT + EI+ +GY N Sbjct: 195 DDLAQVCNLNRHYFSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSN 254 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFK 283 +F+ F RH SP+ +R+ K Sbjct: 255 QFNFSTAFKRHYQISPNRWRKIHK 278 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 98/252 (38%), Gaps = 7/252 (2%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 G HVH E+ Y+ G ID ++Y D+V++ G LH + Sbjct: 25 VGAHVHPFN-EIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVI 83 Query: 95 ALYGF---QFQGAEENQLLQPHSCP--VIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 + Q +L++ P V + ++ + L ++L S + + + Sbjct: 84 SFRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFEND-SPDELSPAF 142 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 L + + + +I+++ Y+ +Y + ++LE ++ KF S Sbjct: 143 IKVGLIELLLFIIRCKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLS 202 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 SY+ +F Y+I R+ A L T S +I++ G+ + ++F F + Sbjct: 203 RSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRK 262 Query: 270 HVGCSPSDYRRQ 281 G SP YR+ Sbjct: 263 AKGISPHKYRKN 274 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 7/258 (2%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 P++ +H H E E+I + G T++ + D+ I G LH + ++ Sbjct: 28 HPRYNMPYHWH-TEYEIIRIISGEFLLTLNGNELKLKTGDLAFIHAGILHGG-TPIDCVY 85 Query: 90 TTCTCALYGFQFQGAEENQLLQP--HSCPVIAAGQGKE--VIKTLFNELSVILPQSKNSQ 145 + + ++ +Q H+ VI + + ++T+ N L + Q K Sbjct: 86 ECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLELQTVCNYLFESMAQKKLGY 145 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD-VLIKDILFYLNNNYREKITLEQLSK 204 + + L I+ + + ++ K++L + Y + +TLE LSK Sbjct: 146 ELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNVLSLIEQQYPDPLTLEDLSK 205 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + Y C F + SPI+Y+ R+ + L +T S EI+ G+ ++ +F Sbjct: 206 AAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTNESITEIALNCGFNDISYFI 265 Query: 265 KLFLRHVGCSPSDYRRQF 282 K F ++ G +P Y + + Sbjct: 266 KTFKKYKGVTPKQYLKDY 283 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 12/269 (4%) Query: 23 SRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVA 82 + PK + + +++YV G A F D V + +V+ + + Sbjct: 47 GTYRLKKRPKLPTFWAKGRRDYQILYVASGKAHFWFDGVEEVVTSGHMVLYQPKEIQKYV 106 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV---IAAGQGKEVIKTLFNELSVILP 139 V D ++ F G + +L H P+ + K LF ++ L Sbjct: 107 YYVEDHPE-----VFWIHFTGYDVKNILNYHGIPLDKHVFYSGTLPDYKMLFRKIIRELQ 161 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 Q + D A I+ + + SE+ I+ + Y N NY K+++ Sbjct: 162 QCEYGYE----DYIASLFNIILFLVSRQQQESEKTTTSIPEEIEAAVAYFNENYNTKVSV 217 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 + ++ S ++ F + +ISP Y++ RM A+ L NTE + EI+ VGY+N Sbjct: 218 DDYAESLHISTNWFIRNFKQYMKISPAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDN 277 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 +F+++F + G SP+ YR+ + + Sbjct: 278 PLYFSRVFKKEYGVSPAQYRKNLEESTEK 306 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 107/283 (37%), Gaps = 22/283 (7%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 + F K R + F + H HD EL+Y+ G + ++Y Sbjct: 2 NGTMSEYFNINKLIREAAFRMDET-------HSHDC-YELVYLFSGECNILVSHTIYRMV 53 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA------- 119 +V+I G +H + ND A +F + + L + Sbjct: 54 PGTLVIIPPGEIHKTSYGSNDKVRQQRTA---LRFSIKDTDWLCSALGKDFVKDNLTAGI 110 Query: 120 ---AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYI 176 + KE I+ L + + Q + + + I S Sbjct: 111 IEVPDKRKEYIENLITRM-IYENQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEID 169 Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 ++ I+D+ Y+ NNY ++I L+ ++K+F S SY+ +F + Y++ R+ E Sbjct: 170 AQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKE 229 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 A L T S +I++ G+ + ++F F R G SP+ YR Sbjct: 230 ACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIKGISPNKYR 272 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 107/256 (41%), Gaps = 7/256 (2%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 H H+ E+++ G R I+ + ++V + +H++ SD Sbjct: 26 NTHIPAHWHEA-MEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSK-LYMF 83 Query: 92 CTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS--KNSQTSSL 149 + Q + L C ++ K +L+ L ++ +N TS++ Sbjct: 84 LCIHVDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAM 143 Query: 150 WD---AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 A ++ Y + + + G + + +++ I+ Y+N +Y EK++LE+++ + Sbjct: 144 RSDGTALLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQV 203 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S Y C F + I+ + Y+ + R++ A L NT+ S +E+ G+ N F +L Sbjct: 204 GFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRL 263 Query: 267 FLRHVGCSPSDYRRQF 282 F G +P R + Sbjct: 264 FKEIYGMTPRQARNSY 279 >UniRef50_C5EG90 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG90_9FIRM Length = 298 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 111/277 (40%), Gaps = 16/277 (5%) Query: 23 SRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVA 82 + P++E+ + +L+Y+ G+A F + A V+ Sbjct: 28 GHYKLVHFPRFETTRPTGRPDYQLLYIASGIAHFQKGETYVPLPAGSAVLYHPNHTQFYY 87 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSCP---VIAAGQGKEVIKTLFNELSVILP 139 D + +Y F G +Q L P G I + FN + Sbjct: 88 YSAEDSSE-----VYWIHFTGNRVSQYLSDWGVPDNDFYNVGINSRYI-SFFNHIIHE-Q 140 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 Q K L + + IL K A Y +I + YL+ +Y E I++ Sbjct: 141 QLKKENYMELCKYYLIQILILMNRGMKEA---SAPYNNHVSIINKTVTYLHEHYNEPISI 197 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 L+K+ + ++ H F + Y +SP Y++ R+ +AK LTN LS ++++ GY + Sbjct: 198 IDLAKENHLTPNWFNHCFQEYYGMSPQAYLLNIRIDKAKEFLTNYMLSISDVALLTGYSD 257 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFP 296 +F+++F R G SP YR+ NC +E S P Sbjct: 258 AFYFSRIFKRKTGLSPQQYRK---NCMVFEEEHSYSP 291 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 180 bits (456), Expect = 6e-44, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 105/270 (38%), Gaps = 17/270 (6%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 LSRF S H H E EL + +G + I+ ++ A + +H Sbjct: 64 LSRFYTS-----SFQWHWH-TEIELTLITEGTMVYQINDQIFYPRAGQALFGNSNTMHTG 117 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA-----------AGQGKEVIKTL 130 + + + G + +++ ++ P++ + + L Sbjct: 118 RMENGRDCRYISITFHPRLLYGYQGSRIASRYTDPLMENAALPAVCFDLSQEWHGEAVGL 177 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 ++ I ++ + +LY + + K I+ +L +++ Sbjct: 178 LEDIIRIDSLRYDTYEMDIQMDLFRFWKLLYLHCRPDREPAHTAGRKNQERIRQMLSFIH 237 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 NY+ ITL+ +S+ S C F + S Y+++ R+ ++ + +L+ E Sbjct: 238 ENYQSDITLDDISRHIHICKSECCRVFKGYMKESLFEYLLKYRIEKSIPDVLEGKLTMTE 297 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + R G+ + ++F+K+F + GCSP YR+ Sbjct: 298 TAIRAGFTDPNYFSKVFHKIKGCSPRSYRK 327 >UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillaceae RepID=B1HRT8_LYSSC Length = 294 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 117/277 (42%), Gaps = 7/277 (2%) Query: 12 TLFVAGKTPR-LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 TL + + P L + D H H E + +Y+K G A++ + +++ V + Sbjct: 18 TLHGSKEFPVALYETTMNMDSMDFLPLHWH-KEIQFVYLKSGCAKYRVGANVLVLEEGEG 76 Query: 71 VVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK--EVIK 128 + I LH + A + G + + + + P + + ++ K Sbjct: 77 LFINTSELHEAKPFQMEHAIVYCINVDPIIIGGHDGSIFMTNYVQPYLTTHRQPYLKLTK 136 Query: 129 TLFNE---LSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 L + ++ IL + + +W Y ++ ++ + I + K + Sbjct: 137 ELTQKVACMADILQKQEAFYQLKVWRELLYIWEVMLTQSLLTEEIVDPSIIVQQERAKAM 196 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 L +L+ +Y++KITLE L+K S + F K ++P Y++Q R+ ++ L + E Sbjct: 197 LNFLHTHYQQKITLEDLAKHVYLSRAECSRYFKKVIGLTPFTYLLQYRLRKSIELLRDDE 256 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + I+ G+ V ++ + F + G SP YR++F Sbjct: 257 QNVTIIAANTGFSTVSYYIEKFKEYTGYSPHVYRKKF 293 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 106/263 (40%), Gaps = 15/263 (5%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 + H H +E E I V +G + S +V + ++ G LH++AS P + Sbjct: 31 HQQTVNLHWH-SEAEFIVVTRGSVCLQVGSQRHVLADGGVALLSGGELHSMASPGKGP-S 88 Query: 91 TCTCALYGFQF-QGAEENQLLQPHSCP-----------VIAAGQGKEVIKTLFNELSVIL 138 C ++G +G +++ Q + P + + + E++ L Sbjct: 89 ECKAIVFGLDLLEGPSGDRVQQSYLSPLASGKLRLPGAIAHDHPVRPHLAARLCEIAEAL 148 Query: 139 PQSKNSQTSSLWDAFAYTLAILYY-ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKI 197 + ++ LA L+ + + ++ +K +L Y++ + +K+ Sbjct: 149 EEQPVGYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDDRRADTLKAVLTYIDEHLSDKL 208 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 L L++ S + C F + P+ YV +RR+ A L + S I +G+ Sbjct: 209 RLADLARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITAIGMDLGF 268 Query: 258 ENVDHFAKLFLRHVGCSPSDYRR 280 +V +F K+F + C+P YR+ Sbjct: 269 HDVSYFIKVFRSYKHCTPLAYRK 291 >UniRef50_C6PBN1 Transcriptional regulator, AraC family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBN1_CLOTS Length = 295 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 71/281 (25%), Positives = 119/281 (42%), Gaps = 19/281 (6%) Query: 16 AGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVAR-FTIDSSLYVAHADDIVVIE 74 P F SDD + H H++ E+ YV G ID Y + DIV+I Sbjct: 11 DDNLPIKIIFHTSDDAQL-VPRHWHES-IEISYVLSGKIDDIYIDGIHYTSEQGDIVLIN 68 Query: 75 RGRLHAVASD--VNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN 132 +H+ + N A T + + + +Q+ + ++ Q E +FN Sbjct: 69 SNAIHSFSVVQGKNRKAVTFFISYEFLKTNYPDIDQI----AFDCVSIDQNDEHKIKIFN 124 Query: 133 ELSV----ILPQSKNSQTSSLWDA----FAYTLAILYYENFKNAYRS--EQGYIKKDVLI 182 EL I+ N + SL +Y L L +NFK + +S E K + Sbjct: 125 ELRENLDSIIRAFSNLRDDSLAHIKVIGLSYELIYLLLKNFKISKKSFGEIKTKKYLDRL 184 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 +I Y+ NY + ++++ +S KF S Y+ F K ++ NY+ R+ ++ L Sbjct: 185 TEITNYIKENYSQDLSIDIISAKFNLSPEYLSRFFKKYMGMTIHNYINTVRLEKSYRDLM 244 Query: 243 NTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 NT+ S EI+ G+ N F K+F +P+ YR++ K Sbjct: 245 NTDQSITEIALEHGFPNEKSFNKVFKTFYNITPNQYRKKIK 285 >UniRef50_B0NGA4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NGA4_EUBSP Length = 295 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 108/240 (45%), Gaps = 13/240 (5%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + LIY +G ++ ++ I + H +D DP + + F+ Sbjct: 60 QYILIYCTEGKGTIEVEGEVFEMRKSGAFCIPCKKGHRYYADAKDPWS-----ILWVHFK 114 Query: 103 GAEENQ--LLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 G + +PH P + + + LFN L +L ++ T + + L+++ Sbjct: 115 GENTAYFPIDEPHVVP-MNSRHSDNRMMVLFNLLFRVLRRN---YTLGNFIYISQVLSLI 170 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 E + E + V + ++ ++ N +TLE++S++ + S SY+ F + Sbjct: 171 LSEVYYREKVDESSVQDRHVTM--VIRFMYENLTRSLTLEEISEEVQLSRSYLNTIFKNQ 228 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 SP+ + I +M EA L NT L E+S R+GYE+ +F+++F + VG SP DY+ Sbjct: 229 TGRSPVEFFIHLKMQEACKLLKNTNLYIYEVSSRLGYEDQYYFSRIFKKVVGVSPKDYKN 288 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 11/268 (4%) Query: 21 RLSRFAFSDDPK-WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 + P ++ H HD E E+IYV+KG ID + + + G LH Sbjct: 17 PFCEYHMRYFPHAFQIPVHWHD-EMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLH 75 Query: 80 AVASDVNDPATTCTCAL----YGFQFQGAEENQL---LQPHSCPVIAAGQGKEVIKTLFN 132 +++ + P T FQ + A E+++ L+ H+ ++++ L Sbjct: 76 MMSA-PDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIP 134 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 L ++ ++ T L + + + E L K+IL Y+ +N Sbjct: 135 ILDELVEENGKMGTHRQIQVRIRLLQM-MDLLVEYSQLEELTRNASGELEKEILLYIQDN 193 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 Y + I L +LS+ F S Y+ F++ + ++ YV R+ A+ L +T+LS EI+ Sbjct: 194 YHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIA 253 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + GY+NV +F + F +G SP YR Sbjct: 254 MKSGYQNVSYFIRRFSSAMGESPLRYRN 281 >UniRef50_A7VFB6 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFB6_9CLOT Length = 323 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 120/298 (40%), Gaps = 40/298 (13%) Query: 25 FAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA--VA 82 + ++ + +W H H+ E E IY +KG I++ Y HA + I LHA + Sbjct: 27 YEWNGENEWHVVPHWHE-EMEWIYFQKGDFPVWINTKEYQVHAPAFMCIHPEELHALILE 85 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSC-----PVI--AAGQGKEVIKTLFNELS 135 D + A + F+ A E ++L P + PV+ + E + + E+ Sbjct: 86 KDGIESAVVFPVDILCFERYDAAEAKVLGPLAEGKLRMPVLCQSGDAAFEELSACYKEIE 145 Query: 136 VILPQ-----------------------------SKNSQTSSLWDAFAYTLAILY-YENF 165 +L Q KN ++ +A+ Y Y+ F Sbjct: 146 QVLRQMKEHDTKKVQHLDSSITRENVAGEPKQNLQKNMLYLNIKAKMLELIAVAYKYDLF 205 Query: 166 KNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISP 225 R ++ +K +L Y+ +Y I L +L++ + Y C F K + Sbjct: 206 TRQVREDREESGTVENLKKVLQYIGEHYGSPIRLSELAELVNMNEQYFCRYFKKNIGKTI 265 Query: 226 INYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 Y+ R+ +A +L TE +I+ G++N+ +F + F + G +PS+YR++ K Sbjct: 266 TEYINVIRVEKAATALAETEDKIIDIASACGFDNIGYFIRRFKKEKGMTPSEYRKKSK 323 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 179 bits (455), Expect = 8e-44, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 115/281 (40%), Gaps = 15/281 (5%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 ++ A L++ K +LSR+ +E+ H H + E IY+ G + I+ + Sbjct: 17 YNLAGFPLYI--KKDKLSRYG------YEALCHWHPD-LEFIYIIDGAMDYFINGNRIPI 67 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE------NQLLQPHSCPVIA 119 ++ + RLH S + T ++ F + + Q + I Sbjct: 68 RQGQVIFVNSRRLHYGFSRQKEECTFIALVVHPSLFTNSFDKAWIFAEQKFGFANVDYIL 127 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD 179 K + + I + + + L S + Sbjct: 128 LDSHISWQKKMIEGIDRIYREINAASFNPLRLLAEAISICADAGEHIETMESSGKHNVTQ 187 Query: 180 VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 + ++ Y+ NNYREK+TL++++ S C F + R+SP+ Y+ + R++++ Sbjct: 188 MAFLNMTEYIQNNYREKLTLDKIAGAGAVCRSKSCQLFRQYVRMSPVAYLTKYRLSKSAE 247 Query: 240 SLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L +TELS +EI+ G+++ ++ LF + G +P +YR+ Sbjct: 248 LLRDTELSVSEIASLCGFQSPSYYINLFKKETGQTPLNYRK 288 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 95/250 (38%), Gaps = 10/250 (4%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H + E+ Y+ G + I+ +Y D+ +I +H + + A Sbjct: 35 PHYH-SYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYF 93 Query: 97 Y------GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 G E + I + + + I+ L ++ Q + L Sbjct: 94 SRDTVTSFLSLCGREAFGHIFSQPKRTIPS-EFRPKIEELLAQMQDEEKQGDSYCQIQLC 152 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 L +L + A R + + + Y+N +Y+E +TL Q++ S Sbjct: 153 SLLHQILVVL--GRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSP 210 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 +Y +F + Y+ R+ +A L NT+LS ++ G+ + ++F +F R Sbjct: 211 TYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRL 270 Query: 271 VGCSPSDYRR 280 G SP +YR+ Sbjct: 271 TGVSPREYRK 280 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 8/254 (3%) Query: 29 DDPKWE-SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 ++ W HH HD E E++Y KG ++ + I G LHA+ + Sbjct: 28 EEKNWSGVPHHWHD-EMEILYFSKGSYTLFVNMEQFQIEEKCFYFIYPGELHAIVPHSDS 86 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 + F+ Q L+P + + + +F++ P+ S Sbjct: 87 TESALVFHPSLLGFEYKLFPQCLKPSNPAFSPFEKEYRKVFHIFHQ----FPEDSLSARL 142 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + IL F + ++E+ + IK L +L+++Y+EK+ + L+ + Sbjct: 143 FIQSGIFKMAGIL--STFPSLLQTERKTDMRIETIKTALDFLHSHYQEKLYIRDLALQVN 200 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + Y C F K SPI Y+ + R+ +A L T+L E+ G+ ++ +F K F Sbjct: 201 MNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEVGMDCGFFHLGNFMKEF 260 Query: 268 LRHVGCSPSDYRRQ 281 ++ +P YR++ Sbjct: 261 KKYTETTPLQYRKK 274 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 10/277 (3%) Query: 21 RLSRFAFSD-DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 F F D + H H + EL V +G F I+S Y +D V++ +H Sbjct: 15 PFRMFIFEGRDGNYRVSKHWHQS-VELFLVLEGTLDFFINSRQYTLKPNDFVIVNPNEIH 73 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 ++ DP T + F+G ++ K + L + Sbjct: 74 SIE--CPDPNITIVLQIPMKSFEGYMSDE---SRITFADKDESQKARLVALVTAMYRTYE 128 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL--IKDILFYLNNNYREKI 197 + + + F L ++ E F+ + +K L + + Y+ NY +++ Sbjct: 129 KGEFGYRLKVKSQFMEFLYLIVTE-FRIEQIDKVRVQQKRHLDKLSQVTQYMKENYDKEL 187 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 +LE ++ +F + SY+ H F + + Y++ R+ A L N++ +I+ G+ Sbjct: 188 SLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVGDIALDHGF 247 Query: 258 ENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSE 294 + FAK F + GC PS YR+Q Q+ +++ Sbjct: 248 ADARAFAKAFKKRYGCLPSQYRKQMNQKQVNQKQMNQ 284 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 13/265 (4%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD-----V 85 P H H E EL+YV G + I S + D+++I H +D Sbjct: 31 PNKNLVWHYHP-EIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNT 89 Query: 86 NDPATTCTCALYGFQFQGAEE----NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 ++ G F E QL + + G K+ I ++ ++ +S Sbjct: 90 SESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAKKKIG---EKIEILEYKS 146 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + ++ + + Y+ + S + K++ I I ++ NYRE I+LE+ Sbjct: 147 DFQRLLAILNILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKENYREPISLEE 206 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 ++ +V C F K + + +V + RM A L+ E+S EI + G+ N Sbjct: 207 MADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFS 266 Query: 262 HFAKLFLRHVGCSPSDYRRQFKNCF 286 HF K F G SPS+YR Q K+ Sbjct: 267 HFNKSFKAFTGMSPSEYRNQLKSVM 291 >UniRef50_B6FJC5 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC5_9CLOT Length = 309 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 109/265 (41%), Gaps = 21/265 (7%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H H+ E + V G + +D LY + + I R LH + ++++D + Sbjct: 46 MDLHWHE-ELQFTVVTSGKLKLRVDGKLYTLDEGNGIFINRNLLH-ITTEISDGGRYLSF 103 Query: 95 ALYGFQFQGAEENQLLQPHSCPVI------------AAGQGKEVIKTLFNELSVILPQSK 142 + + + P + KE++ TL ++ ++ + + Sbjct: 104 NFPDKVVSFFSGSTMEENFVLPYVGNYGIAVVEFKRTTSWQKEILDTLL-KMELLFKRRR 162 Query: 143 NSQTSSLWDAFAYTLAI--LYYENFKNAYRS----EQGYIKKDVLIKDILFYLNNNYREK 196 + + + + + I ++Y N +S YI+K I+ +L Y++N Y Sbjct: 163 EKRQAVGREEYQIAIKIVEIWYMMICNIEKSGKKISNSYIRKQERIQAMLSYIHNQYMHP 222 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 + L +++ SV C F + SP Y+ + R+ +K L TELS E+S VG Sbjct: 223 MCLADIAQAGNVSVGECCRGFKEVVCKSPNEYLAEYRILRSKELLRGTELSVTEVSGAVG 282 Query: 257 YENVDHFAKLFLRHVGCSPSDYRRQ 281 + +V HF + F + G +P Y+ Sbjct: 283 FNSVSHFIQCFKKMTGVTPKAYKNM 307 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 94/235 (40%), Gaps = 3/235 (1%) Query: 49 VKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQ 108 V++G + + Y D+ +I G +D P + G + E+ Sbjct: 2 VQEGRGYLEMGEAHYTLEKGDVFLIPEGVEAWYEADKETPWSYRWIGFEGVSARECLESA 61 Query: 109 LLQPHSCPVIAAGQGKEVIKTLFNELS--VILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 P PV +V + L + +++ + + L FA + Sbjct: 62 GFTP-QKPVRKVRCLDKVGGYIDQMLKCHQLYYENELKRNALLMLVFAELITDNRKNLAG 120 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 + V ++ + Y+N NY +++ + +L+ + SY+ F + SP Sbjct: 121 MGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPR 180 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 Y+++ RM +AK L N ++ E++ VGY + F+K+F G SP +Y+ + Sbjct: 181 EYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEE 235 >UniRef50_C2D033 AraC family transcriptional regulator n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D033_LACBR Length = 312 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 113/306 (36%), Gaps = 43/306 (14%) Query: 5 CFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYV 64 CFD ++ L ++ F+ W H HD E+I V KG +D+ Y Sbjct: 6 CFDISAPVLHISSG-------KFTAAKNWMHKHMYHDGNFEIIIVIKGTLYMQVDNDHYQ 58 Query: 65 AHADDIVVIER-GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG 123 ++ D+ + LH D + F F ++P+ I Q Sbjct: 59 LNSGDVFALPPYHHLHGYKPSPED------TQYFWFHF-------FMKPNGLKTIDVEQD 105 Query: 124 KEVIKTLFNELSVILPQ---------------------SKNSQTSSLWDAFAYTLAILYY 162 + I LFN + +LP + N TS D + I Sbjct: 106 RGKITALFNSDTAVLPLIFNLSTVEKEFVLANQILDVSASNYFTSLSVDYLLTEMIIQLS 165 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 E++ + ++ I ++ N E + + ++ F + Y+ F ++ Sbjct: 166 EDYYQKIIG-PSPSEHAARVETIKNWIRANLSESLRVGDVADAFALNPHYLVRIFKEQSN 224 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + I Y+ + +M EAK L T ++ +I+ + + F K F ++ +PS++RR + Sbjct: 225 ETVIQYINKLKMEEAKELLVRTNMAIKQIAGMAFFSDEKRFMKAFKKYTNLTPSEFRRAY 284 Query: 283 KNCFAE 288 F + Sbjct: 285 TQQFLD 290 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 104/267 (38%), Gaps = 11/267 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H++ ++ Y G A+ + + A+D+V++ LH +D T Sbjct: 30 NFPRHWHEH-LQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELH-YLESTSDNLVFYT 87 Query: 94 CALYGFQFQGAEENQLLQPHSCPVI-------AAGQGKEVIKTLFNELSVILPQSKNSQT 146 + L + P+ Q + L ++ + K Sbjct: 88 IRFEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYE 147 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI--KDILFYLNNNYREKITLEQLSK 204 ++ Y + L + ++ + K+ LI + + Y EKITL +L+ Sbjct: 148 LAIKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLAN 207 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 SV + C F + + +Y+ R+ ++ + L T+ + EI+ G+EN ++F+ Sbjct: 208 TVGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFS 267 Query: 265 KLFLRHVGCSPSDYRRQFKNCFAEQEI 291 ++F ++ SPS YR +KN + Sbjct: 268 RIFKKYHSTSPSQYRNLYKNLAVTPKE 294 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 15/254 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H++ EL++VK+G+ + Y A+ DI + G LHA+ Sbjct: 37 HWHES-MELVFVKQGMGLVQVGVVTYPAYRGDIFIFAPGTLHALRQAEGQRMEYENIIFE 95 Query: 98 GFQFQGAEE---NQLLQPH-----SCPVIAAGQGKEVIKT--LFNELSVILPQSKNSQTS 147 GAE+ + L P S PV ++ EL + Sbjct: 96 PELLGGAEDLCAEKYLLPLQSGRLSLPVRLTPNDLCYLQAAACLRELEDANRAKRPGYEL 155 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + A LA+L + + +E + +K +L +L+ +Y E + + + Sbjct: 156 LVKGALLRFLALLIAQG-RQCLSTETADTQ---RLKTVLQWLSAHYAEPLRVADAAGVCS 211 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 S S+ F + S I ++ + R+ A +L T+ + I+ R G+EN+ +F + F Sbjct: 212 FSASHFMRWFRQMTGQSFIAFLNEYRLNTAAEALRTTDETVLTIASRCGFENLSYFNRAF 271 Query: 268 LRHVGCSPSDYRRQ 281 H G +P DYR++ Sbjct: 272 KAHFGMTPRDYRKK 285 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 95/256 (37%), Gaps = 13/256 (5%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H H E E + +G + +Y D + I + LH Sbjct: 45 FRCHWHP-EIEFSVITEGECIYEAGDRVYELKKGDGIFINQNVLHMAEMKGKLECRFGVV 103 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIAAGQG-----------KEVIKTLFNELSVILPQSKN 143 F G+ E+ + + PVI + ++ + EL I + Sbjct: 104 RAEAFFLGGSTESLIYRKFMEPVINNPEISCVPFYGDIPWQKRLMRQLAELIRIYEERPE 163 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + F+ L + + + + K I+ + Y+ NY +KITL+ ++ Sbjct: 164 GFELMMTSGFS-LLWLEFVKALGEEKGNAVSINKDAERIRKGISYIQRNYTKKITLKDIA 222 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + ++ S C F + SPI YV R+ + + S EI+ + G+ +F Sbjct: 223 EICQSCQSECCRMFRNVVKESPIEYVNTYRIRRSLILIEEGTYSMTEIAQKTGFSGSSYF 282 Query: 264 AKLFLRHVGCSPSDYR 279 ++F + +GC+PS Y+ Sbjct: 283 TEVFKKKMGCTPSKYK 298 >UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KN44_CLOPH Length = 278 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 7/253 (2%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 +P ++ G V D+ + Y+ G + + + + D+ +I +D DP Sbjct: 32 EPNYQWGPGVRDHYL-IHYIVSGKGYYETNHKTFPLTSGDVFLIYPDTQVTYYADALDPW 90 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 G G + PVI++ E +K ++L I N +++ Sbjct: 91 EYYWVGFSGSD-AGLILEATDFSNESPVISSCSYGEKVK---DQLYQIYEARGNEFANAV 146 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 A A L I A + + + ++ + Y+ +++ IT++ ++ S Sbjct: 147 --AMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAYVGIS 204 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 S++ EF SP Y+ + R+ + L NT+LS I+ VGY+N +++K+F Sbjct: 205 RSHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSKVFQS 264 Query: 270 HVGCSPSDYRRQF 282 G PS YR Sbjct: 265 VKGMPPSKYRNLH 277 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 110/286 (38%), Gaps = 23/286 (8%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 +D+A L++ + + H HD+ E IY+ G R+ ++ + Sbjct: 18 YDHAGIPLYIRAA-------HLASYYNMCAPCHWHDD-IEWIYIITGKMRYYVNGKRLIL 69 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 + D +++ ++H + + F NQ+LQ E Sbjct: 70 NEGDSLMVNARQMHYGYAFEQQDCYFLCILFHPSLFGN---NQILQEKYFLPFFENTSLE 126 Query: 126 VIKTL------------FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ 173 E+ ++ S + + + L + +A +++ Sbjct: 127 FHHFYSNDEAGVKVGRYLQEVLLLKEDSDSGYELGVISCMLELWSFLIRTDLLSAAKNKS 186 Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 ++ + KD++ ++ +Y EKI+L ++ S C F + SP++++ R Sbjct: 187 ESEQELNIQKDMVSFIYQHYPEKISLTDIAAAGHVGRSKCCQIFKHYMQQSPVDFLNTYR 246 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 + + L T+ S EI+ G+ ++ +F+K F+ GC+P +YR Sbjct: 247 LKISCRLLCTTQKSITEIAILCGFNHLSYFSKYFMECYGCTPREYR 292 >UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8J8_PAESJ Length = 294 Score = 178 bits (453), Expect = 1e-43, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 6/251 (2%) Query: 42 NETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQF 101 N T + + G F Y DI VI G L +D +P + AL G Sbjct: 45 NYTLIHSIDHGFGTFEWQRKKYHLGKGDIFVIFPGVLFNYEADKAEPWSYRWVALQGRNV 104 Query: 102 QGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILY 161 EN + + P++ G + ++F + L +SL + L + Sbjct: 105 TEMLENVGVT-ITNPIVR-GADSANLASIFETIEQELELKSGETITSLATDGWFRLLLAE 162 Query: 162 YENF---KNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 + K Y S + + L++ + + Y I++E+L+ ++ F Sbjct: 163 FARLNTNKLHYSSTKVLTDSERLVEQAIRWFQTQYMLPISIEKLATSLGYHRTHFTKVFK 222 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + +SP Y+ Q RM A+ L NT +S ++ G+ + +F+K F + G SP+ Y Sbjct: 223 QLTSLSPKQYINQVRMERARELL-NTNISIEQVGNSCGFTDPLYFSKQFKKWTGTSPTQY 281 Query: 279 RRQFKNCFAEQ 289 R + K + ++ Sbjct: 282 REELKRLYRDR 292 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 4/260 (1%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 L F ++ H H E+ + +G + + + Y A A + + H Sbjct: 14 LYAFDPWNEETHPYNCH-HHEFLEISILLEGESEYIVQGQQYHATAGTVFLFNPRTEHGE 72 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA--GQGKEVIKTLFNELSVILP 139 + + +G N + ++ G E + +EL+ Sbjct: 73 QQKAGTYSHQLHIGISNLYLEGLARNVFPNKSALLDLSHLHGAFLEKAWQIVHELNHQEV 132 Query: 140 QSKNSQTSSLWDAFAYTLAIL-YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 +S + + + Y L L + K R + +K L+ ++YL ++ E+IT Sbjct: 133 ESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLETHHDEEIT 192 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 LEQL++ + +Y+ F + PINY+IQ R+ AK L N LS E++ VGYE Sbjct: 193 LEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEVAKTVGYE 252 Query: 259 NVDHFAKLFLRHVGCSPSDY 278 + HF+KLF ++ G SPS + Sbjct: 253 DAYHFSKLFKKYYGKSPSQF 272 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 57/275 (20%), Positives = 106/275 (38%), Gaps = 11/275 (4%) Query: 16 AGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 A + ++SR S + H H + E+ Y+ G R ID +Y D V+I Sbjct: 17 AKNSIQISRIRRSSSYVMKR-PHYH-SYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPP 74 Query: 76 GRLHAVASDVNDPATTCTCAL-----YGFQFQGAEENQLLQPHSCPVIAAGQG-KEVIKT 129 ++H + A F E + P IA Q + I+ Sbjct: 75 LQIHRALYEEGLQAERYDMYFTKEEADAFHASCGREG-FERVFLNPRIAIPQPLRPGIEG 133 Query: 130 LFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYL 189 L + LS Q +++ + + + + +L ++ + + + I Y+ Sbjct: 134 LLSHLSHENGQ-EDAYSHVQQQSLLFQILVLIGR-CQDTQQEKDSLNDSEAAIVKAARYI 191 Query: 190 NNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQA 249 N YRE +TL+ ++ S +Y +F YV R+ +A L NT+ + Sbjct: 192 NLQYREHLTLDAMAAMSNMSPTYFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVT 251 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 I+ G+ + ++F +F + G SP +YR + Sbjct: 252 SIAIACGFSDGNYFGDVFKKLTGLSPREYRNGIRG 286 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 100/278 (35%), Gaps = 15/278 (5%) Query: 17 GKTPRLSRFAFSDDPK-WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 +P +++D + H H+ E E I G ++ + V I Sbjct: 35 HGSPLFPIACYAEDLSCFSVAWHWHE-EFEFILAALGPIHVDVNKTRLTLQTGQGVFINS 93 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG-----------K 124 G LHAV + ++ + G + Q P++ G + Sbjct: 94 GALHAVE--PAEGRALLHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFFLLDEAVPWQ 151 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 + E + + + L +L + + + +K Sbjct: 152 RQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQEQIASERMKQ 211 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 +L Y+ +Y E++T+E+L+ S S F + I+PI YV Q R+ +A L +T Sbjct: 212 MLRYVEEHYAEELTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVEKAAELLRST 271 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L E+ G+ + +F K F C+P +YR +F Sbjct: 272 RLKTGEVGLECGFSDASYFIKTFREIKHCTPREYRIRF 309 >UniRef50_UPI0001BC2F1F 2-isopropylmalate synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC2F1F Length = 288 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 111/267 (41%), Gaps = 8/267 (2%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P F+ ++ H HD E E+IY++ G TID+ L+ ++ G L Sbjct: 16 YPYSQYHVFNQQTAFQFPIHWHD-ELEIIYIRNGSINITIDNELFTGTGGSFFIVNPGEL 74 Query: 79 HAVASDVNDPATT---CTCALYGFQFQGAEENQLLQPHSCP---VIAAGQGKEVIKTLFN 132 H + S+ + FQ EN L +P + + E+ + + Sbjct: 75 HYMGSNDLNADYYTILFPLEFISFQSNDYVENMLFKPMRSSHVILTHSLPYSEIYAEIIS 134 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 L ++ +K + D L IL ++ D+ ++I+ Y+N+N Sbjct: 135 LLEKLIYINKYEKGFYQLDCKILLLEILSNILSIPDILVKKTSNASDMR-REIITYVNDN 193 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 Y EKITL L+ +F S YI F K + I+ YV R+ AK L T +S +++ Sbjct: 194 YLEKITLSDLADEFHMSEKYISRYFKKHFNITFSKYVNHMRLLYAKNLLDTTNISITDVA 253 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYR 279 G+ NV +F + F G +P YR Sbjct: 254 LSSGFPNVSYFIRSFKESYGKTPFSYR 280 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 99/254 (38%), Gaps = 7/254 (2%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G V N L +G F Y +I G+L +D +P + Sbjct: 6 PSYSFGPAV-RNCYLLHLCLEGEGVFYSGEERYPIKQGQGFLIHPGKLTFYQADSVNPWS 64 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 + G + L P+ + Q + + + + N Sbjct: 65 YLWVGIGGHDAEKYLRLAGL-SARNPIFSCTQIDTAKSYILDMMKHHALSAANE---IYI 120 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 L E+ +Q V I + Y++ NY+ +T+++++ + Sbjct: 121 QGILMQFLALLVEDAGCTVSPQQNTSS--VYINQAISYIHKNYQNPLTVQEIADYLSLNR 178 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 SY+ F K ++SP ++ + R+T+++ L ++ LS I++ GY + F+K F + Sbjct: 179 SYLTELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRKV 238 Query: 271 VGCSPSDYRRQFKN 284 G SPS+YR+Q + Sbjct: 239 NGLSPSEYRKQKRG 252 >UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8 Length = 286 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 12/264 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTI-------DSSLYVAHADDIVVIERGRLHAVA 82 DP G V ++ YV G R DSS+Y A + ++ ++ Sbjct: 28 DPLHSFGPTVKNHFL-FHYVLSGKGRLYSFNKGTQNDSSIYTIKAGEGFLLTPNIINTYE 86 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSK 142 +D +DP G + Q E L + + + ++ + L +L Sbjct: 87 ADKDDPWNYVWVEFEGLKAQRYLEEIGLSSKNL-IFTPKEYNNDDNSIKDNLMFLLNNPS 145 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 ++ L + + A+L +F N + ++ +++ + Y+ NY I++E + Sbjct: 146 APDSAILGHLYLFFYALLENSSFNNTKSASNL---QEFYVREAINYIEKNYNNNISVENI 202 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 +K SY F + +P ++I+ R+++A L + +S EIS GY N H Sbjct: 203 AKWCNLDRSYFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELTGYPNQFH 262 Query: 263 FAKLFLRHVGCSPSDYRRQFKNCF 286 F++ F SP +R Q K Sbjct: 263 FSRSFKEVYNMSPRQWRNQNKTKL 286 >UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRK8_PAESJ Length = 284 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 5/247 (2%) Query: 36 GHHVHD---NETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 GH+ + + YV G +F + Y HA +I G L +D ++P T Sbjct: 32 GHYWGPGLRDMYIIHYVHSGTGQFRLGELSYELHAGQGFLIIPGSLVYYKADEDNPWTYS 91 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 L G + + L P + P+ A + K+ ++++ + L S + Sbjct: 92 WVGLKGLHAKSLLQRAGLSP-ANPIFDATEQKDFFESVYEQCHQALEDHPGS-GDLFSQS 149 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 Y K K+ I + ++ N+Y I+++ ++ +Y Sbjct: 150 LLYQYMARLVACNKQPSAPAHAVNTKEAYINKAVAFIENSYSLPISVQDIANFVGLDRTY 209 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + F + +S ++++ RM A L + EL+ +I+ VGY + F+K+F R +G Sbjct: 210 LSGLFKAQLGVSLQAFLLRFRMNRAVELLHHQELTIGDIARSVGYTDPFLFSKMFKRVIG 269 Query: 273 CSPSDYR 279 SP R Sbjct: 270 SSPRTSR 276 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 15/264 (5%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA--VASDVND 87 +P E+ H HD EL YV G +L A D+ +I LH A+D D Sbjct: 26 EPSLEAKLHRHDA-WELYYVVHGQGNRMAGDTLQHFEAGDVALIPPSMLHRWEYAADSAD 84 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHS--------CPVIAAGQGKEVIKTLFNELSVILP 139 + F+ E + + P P A G E ++ + LS + Sbjct: 85 EDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALKFGPESVRVIRKTLSEMNG 144 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 + + S+++ L +++ + K ++ I Y+ +Y I L Sbjct: 145 MDELGRLSAMF----RLLPVIFTSSDHIFAGKPMRIEKNVRRMQQICAYVMKHYVHSIAL 200 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 + ++ + + S C F + ++ +V Q R+ A L +++ +EI + VG+ + Sbjct: 201 DDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHSQKGVSEICYLVGFND 260 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFK 283 + HF ++F +G PS YR+QFK Sbjct: 261 LPHFVRVFTSTMGMPPSKYRKQFK 284 >UniRef50_A5I5L7 AraC-family transcriptional regulator n=10 Tax=Clostridium RepID=A5I5L7_CLOBH Length = 688 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 5/268 (1%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 +S H H N E+IYV +G + TI++ + + +I +I H++ S N+ Sbjct: 23 KSPIHWH-NAMEVIYVLEGSIKITIETESHRVNKQEIGIINPEEAHSIKSITNNNKVLIF 81 Query: 94 CALYGF--QFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 F ++ E S P + +V++ + L + Q ++ + + Sbjct: 82 QIDTSFFNKYYDIENMFFYTDFSAPEAQKHEKYDVLRKYLSTLLCEIAQKGDNYEDVVEE 141 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDV--LIKDILFYLNNNYREKITLEQLSKKFRAS 209 L L Y E+ + I+ Y+ +NY KI+++ +++ S Sbjct: 142 ILVDLLYHLINNFHYLIYDEEELKENEVQFERYDRIIKYIYSNYNNKISIQDIARLEFLS 201 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 Y+ +E + S ++V R+ EA L +T+ + +EIS +G+ + +F K F + Sbjct: 202 SHYLSNEMKNKVGYSFNDFVNLTRVEEAIKLLLDTDKTISEISEELGFSHTRYFNKHFKK 261 Query: 270 HVGCSPSDYRRQFKNCFAEQEILSEFPQ 297 H C+P YR+++K E L + + Sbjct: 262 HYKCTPMQYRKKYKVDEETYESLKVYEK 289 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 14/254 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H NE ELI +KKG ++ Y +A D+V + G+LH+++ Sbjct: 39 HWH-NEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYENILFK 97 Query: 98 GFQFQGA----EENQLLQP------HSCPVIAAGQG-KEVIKTLFNELSVILPQSKNSQT 146 + + ++ +QP + PVI + + + +L NE+ + + + Sbjct: 98 SSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQ 157 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 ++ +L N + K IK IL Y+ ++++ I++E+++ Sbjct: 158 LAVKSYLFQIFYLLISNCGLNQIK--PISKKALEKIKTILSYVAEHFQDNISIEEIAGHC 215 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S SY F + +S + Y+ R+ A LT T I+ G++N+ +F + Sbjct: 216 FYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRC 275 Query: 267 FLRHVGCSPSDYRR 280 F + G +P YR+ Sbjct: 276 FKKKYGITPGKYRK 289 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 60/274 (21%), Positives = 117/274 (42%), Gaps = 15/274 (5%) Query: 22 LSRFAFSDDPKWE--SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 RF ++ H H E E+ YV +G AR+ ID + + A DI++I +H Sbjct: 20 PYRFFHNEVKNGRPDILFHWHP-ELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMH 78 Query: 80 AVASDVNDPATTCTCALY----GFQFQGAEENQLLQPHSCPVIAAGQ-------GKEVIK 128 ++ + T + G LQP V G + IK Sbjct: 79 SIHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGYDDIK 138 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 ++ + + L + +LY+ + ++ Y +K+ I+ ++ Y Sbjct: 139 ACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTY-RKNEKIRQLIDY 197 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 +NN+Y + +T++ LS+ S ++ F + S +VIQ R+++A L ++ Sbjct: 198 INNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRPI 257 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 EI+ +G+ N+ +F + F R+ +PS YR+++ Sbjct: 258 LEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKY 291 >UniRef50_Q3XWE2 Helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation n=3 Tax=Enterococcus faecium RepID=Q3XWE2_ENTFC Length = 288 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 112/236 (47%), Gaps = 4/236 (1%) Query: 47 IYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE 106 V+ G + Y+ A +V I+ + +A S +D T C G + Sbjct: 57 FLVESGSGTLEYNGQKYMLQAGGMVFIDCLKPYAHESSEDDLWTLRWCHFNGIGMTEVYK 116 Query: 107 NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 + L+ PV + + ++ L EL I + + A + L +L + + Sbjct: 117 -KYLERGGQPVFRSAK-FDLYAKLMMELHRIAEGQDYVRDMKINAALSQLLILLMEDAWN 174 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 K + +++I YL+++Y +KIT++QLS +F + Y+ F + Y I+ + Sbjct: 175 PDKI--PNMSTKRMELQNIKQYLDDHYTDKITMDQLSAEFFINKQYLHKIFRETYGITIV 232 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 NY+ Q+R+T+AK L T LS EI+ ++G + ++F++ F + G PS++R+ + Sbjct: 233 NYLNQKRITQAKHLLRFTNLSMEEIAEKIGMTDANYFSRTFFKVEGVRPSEFRKMW 288 >UniRef50_A4XGU9 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XGU9_CALS8 Length = 304 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 123/296 (41%), Gaps = 29/296 (9%) Query: 11 ETLF-VAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 E +F + P+ F +DP++ H H N E +YV KG I+S Y Sbjct: 10 EEIFDYVSQRPQKFALNFWEDPRY-FKLHRH-NFVEFMYVVKGEGTEHINSISYSLKPGT 67 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE-----NQLLQPHSCPVIA----A 120 ++ ++H + +P + A+ + QLL + V+ Sbjct: 68 FSIVMPYQIHRIEYSEQNPLSIYVVAISFEELLAPSSIFYRIGQLLLNYDENVLPYYYFE 127 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 G+ KE++ +LF E + Q L +A Y++ +N + Sbjct: 128 GKEKEMMDSLFEEAWIYFNQQDVWAEIILKAKILEIVA--YFDRCRNLACEKNFQSPASN 185 Query: 181 LIK---------------DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISP 225 + +++Y++ NY + I L+ LSK+F S SYI F K + Sbjct: 186 FVTNRAQKESIPVPTDYWQLVYYVHKNYNQNIDLKTLSKEFHLSPSYISQLFKKLVGSNF 245 Query: 226 INYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 N++I+ R+ A L +T+ +I+ VG+++ FA++F +H G S ++R++ Sbjct: 246 HNFLIEVRLQHACSLLLSTDKPVTDIALEVGFDSYSTFARVFHKHKGMSALEFRKR 301 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 11/254 (4%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 H HD E + + + KG+A F I+ H D + I G LH T Sbjct: 39 PLHWHD-EIQFVLILKGIALFQINEEKIEVHEGDGLFINSGYLHMAEEKEGSDCTYICLN 97 Query: 96 LY-GFQFQGAEENQLLQPH----SCPVIAAGQGKEVIKTLFN---ELSVILPQSKNSQTS 147 + F + +QP+ + P + ++ K + + +++ ++ Q + Sbjct: 98 VSPHFVLSQELYSSYVQPYMFSTNLPYLFLAGNQQWAKNILDAVKKINQLIQQKTSLYEI 157 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + L F+ Y +Q + K +K +L +++ +Y EKITLE ++K + Sbjct: 158 DITMQLTLMWKNLVVNGFQLEY--DQSEMIKSHRMKQMLNWIHLHYVEKITLEDIAKAGQ 215 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 S S C F + +P+ YV+ R+ ++ L + E + E+S++VG+ + +F F Sbjct: 216 LSRSECCRYFKRMLNKTPLRYVMDYRIQKSLLLLQHPESNVTEVSYQVGFNSTSYFISKF 275 Query: 268 LRHVGCSPSDYRRQ 281 + + +P Y++ Sbjct: 276 QQAMNMTPLSYKKM 289 >UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514 RepID=B9XJ41_9BACT Length = 295 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 13/244 (5%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 E IY KG I + + ++VI H +D N P T ++ F Sbjct: 59 EVIFIYCAKGNGWCEIAGRKHQISKNQLLVINAFTPHVYGADKNSPWT-----IHWFHAV 113 Query: 103 GAEENQLLQP----HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLA 158 G+ + L PV+ G LF+ +L ++ T + A++L Sbjct: 114 GSNVSVYLDKLGVTEEKPVVPLGGD----VQLFSLFEEVLESLEHGFTPTHLIYAAHSLT 169 Query: 159 ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 L ++ G + + + ++ + RE + + L+ S S+ F Sbjct: 170 HLMGLILRHKDEFGYGETSVRERMANSIEFMKGHLREPLNIVTLAALVNLSRSHYSTSFR 229 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + +P++Y+ RM A L TELS EI ++G+ + +F++ F + SPS++ Sbjct: 230 RVTGYAPLSYLNHLRMQRAVQLLNATELSIKEIGDQLGFSDQFYFSRAFRKVHNHSPSEH 289 Query: 279 RRQF 282 RR++ Sbjct: 290 RRRY 293 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 8/253 (3%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 H HD E E+ + G + +A + I G LH + + Sbjct: 43 PPHWHD-ELEVFVLLSGQVEVVTGDISCIVNAGEGCFINGGVLHTFRALSLGECRYHSFV 101 Query: 96 LYGFQFQGAEENQLLQPHSCPVIAAGQG------KEVIKTLFNELSVILPQSKNSQTSSL 149 GA + + P + G E ++ F E + Sbjct: 102 FESSIVAGAPGSIFDTKYMKPFVEKGHSFVHMKRDEGMEPFFEEFDRCFDACAGEGYAYE 161 Query: 150 WDAF-AYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRA 208 +D + T IL NA +V IKD+L +++ N +++IT+ ++ Sbjct: 162 FDIRDSLTRMILCIAQNMNAPGDSDMPHLAEVRIKDMLGWIDRNLKDEITVSGIAGSANI 221 Query: 209 SVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFL 268 V F++ P+ YV +RR+T A L T +I+ G+ +V +F K F Sbjct: 222 CVRECQRIFSQYVHYRPMEYVQRRRITLAAELLRTTHRQVTDIALECGFSSVSYFIKQFK 281 Query: 269 RHVGCSPSDYRRQ 281 VGC+P+ YR++ Sbjct: 282 NIVGCTPTGYRKK 294 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 9/261 (3%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA--VASDVNDPA 89 E+ H HD EL YV G +L A D+V+I +H +D D Sbjct: 28 NLEAKLHQHDA-WELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEE 86 Query: 90 TTCTCALYGFQFQGAEE-----NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNS 144 + F E +L S K +++ + IL + Sbjct: 87 GHVRYLMVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESS-RIIRRILSEINEM 145 Query: 145 QTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 A L +++ + + ++ I Y+ +Y I L+ +++ Sbjct: 146 DELERLSAMFRLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAE 205 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + + S C F + ++ +V Q R+ A L NT+ AEI + VG+ ++ HF Sbjct: 206 EVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFV 265 Query: 265 KLFLRHVGCSPSDYRRQFKNC 285 ++F +G SP+ YR+Q+KN Sbjct: 266 RVFTNTMGMSPTKYRKQYKNV 286 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 102/272 (37%), Gaps = 14/272 (5%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 ++ S + H HD E E IY+ G F I+ + A D + I + Sbjct: 26 ITTSTISSQAHLQMISHWHD-ELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRS 84 Query: 82 ASDVNDPATTCTCALYGFQFQGAEE--NQLLQP---------HSCPVIAAGQGKEVIKTL 130 A + ++ + N+LL P P + + L Sbjct: 85 APHNGEDCRFIRALIHPSLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRR--GEL 142 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 E++ I + LA LY E + ++ Y++ Sbjct: 143 LREINRINEKHLPGFELESIGLLHILLARLYALFPPEKQTQEDMPGTDISAQRRMVAYIS 202 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 ++Y EKI+L ++ S S C F K + SPI+++ + R+ ++ L +TE S E Sbjct: 203 HHYPEKISLAGIAAAGSVSRSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILE 262 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 I+ G+ + ++ K+F C+P+ YR + Sbjct: 263 IANACGFSSQSYYTKMFSEKFNCTPTQYRSRL 294 >UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1C2_HALOH Length = 276 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 100/253 (39%), Gaps = 9/253 (3%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P G V D+ + ++ G F + + Y A +I + +D ++P Sbjct: 30 PGHSYGPAVRDHYL-IHFIYNGRGIFQVGENTYHLEAGQGFLICPDIVTYYQADRHNPWE 88 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 +G + + L + PV + G ++ +F E++ ++ + + Sbjct: 89 YAWIGFHGLKAKDYLNRANL-SLANPVFSDTDGSP-LRFIFEEMTAARKLKRSREIKLIG 146 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 + + L + N S K+ IK + Y+ NY I + ++ Sbjct: 147 LIYVF----LSHLIELNVSGSTPDNNSKENYIKKAIEYIEKNYSRHIKVIDIANHVGLDR 202 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT--ELSQAEISWRVGYENVDHFAKLFL 268 SY+ F + SP Y+I R+ +A + N LS +IS VGY++ F+K F Sbjct: 203 SYLWSIFNEFLNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFSKTFK 262 Query: 269 RHVGCSPSDYRRQ 281 + G SP Y++Q Sbjct: 263 KTKGISPLHYQKQ 275 >UniRef50_C9LA37 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LA37_RUMHA Length = 326 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 120/291 (41%), Gaps = 15/291 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MY+ + P + ++ + +H H+ ETE IY+ KG ++ Sbjct: 23 MYKINIQEENP--HGTPYFPFQALSQEDFCGQYFAPYHWHE-ETEFIYITKGSLMLRTET 79 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATT---CTCALYGFQFQGAEENQLLQPHSCPV 117 + + ++ I G +H + + F +N+LL P Sbjct: 80 NSQLLTEGNVYFINPGMVHGIFGHSEVSHHYALLFPMSFLSFSQYDICQNELLTPLLSKK 139 Query: 118 IAAGQGKEV-------IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN--FKNA 168 + +G + I +L ++ + + + ++ T+ + + ++ F +A Sbjct: 140 LLFPEGSSLSLEISLQIGSLISKAARLYLEDTSANTALSIKIILLQILEILFQEHAFSSA 199 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 + E ++ +K + Y+ +Y E +TLE L++ + +Y C F ++ +P Y Sbjct: 200 QKHEAEKDFENHSLKSVFSYIEKHYMEPVTLEALAECIPLNKNYFCKFFKEKVGKTPFAY 259 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 + + R+ +A L T E++ GYEN+ +F + F + C+PSD+R Sbjct: 260 LNEYRINQAAAQLLKTTAPITEVALNNGYENISYFVRQFKHYKHCTPSDFR 310 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 107/268 (39%), Gaps = 8/268 (2%) Query: 21 RLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA 80 ++ R F + HH H++ E++Y G A S+ + A D++VI R LH Sbjct: 19 KVHRCEFDGRGQVLFNHHWHEH-LEILYFVSGEATLECGSTTFTAKEGDMIVINRNELHY 77 Query: 81 VASDVNDPATTCTCALYGF---QFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVI 137 S + A + A E + + P + + L LS+I Sbjct: 78 GLSQSDHLFYYALIADFSLLQSHSLDAPEMKFITPITQNRLIFENRISGADALAPMLSII 137 Query: 138 --LPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ--GYIKKDVLIKDILFYLNNNY 193 L + + ++ L +L ++ +K I Y+ +Y Sbjct: 138 KELERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFKYIEEHY 197 Query: 194 REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISW 253 RE +++EQLS S + F + + YV + R+ A + L + L+ +EI+ Sbjct: 198 REDLSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLTVSEIAA 257 Query: 254 RVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 G+ ++ +F++ F ++ +PS R++ Sbjct: 258 ATGFNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWD2_9FIRM Length = 298 Score = 177 bits (449), Expect = 5e-43, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 107/257 (41%), Gaps = 14/257 (5%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H N+ E+ +++G A F + Y + ++ R H+ +S N+ T Sbjct: 39 NVPIHWH-NDLEINLIREGEAVFQVYQKSYRVRTGEGFLLNRNVPHSCSSPGNEHVRYST 97 Query: 94 CAL--------YGFQFQGAEENQLLQPHSCPVIAA----GQGKEVIKTLFNELSVILPQS 141 + +G + LQ + P I GKE+++ L N++ + Sbjct: 98 ILVRPDFLYGDFGSDVERKCFQPFLQNSAIPCIYLTGFDENGKEILQKL-NQVEEAFDRK 156 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + A++ Y + + + +++ ++ +L YLN ++ E I+L+ Sbjct: 157 RFCYELKIKGLLCEAFAMILYGHRQELTKFVPANLQELERLEKMLNYLNMHFTEVISLQD 216 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L+ + S C F K + Y+ + R+ ++ + + + S +I+ VG+ N Sbjct: 217 LADQVHLSREVCCRLFKKMTGKTITGYLEEYRVNKSFSLVQSGQYSMTQITEMVGFSNPS 276 Query: 262 HFAKLFLRHVGCSPSDY 278 FA F + GC+P +Y Sbjct: 277 RFASAFRKRFGCNPGEY 293 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 5/268 (1%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P + P++E H H E E+I + G R ++ + Y+ DD+ I+ G+L Sbjct: 17 FPIEYHYVDHTHPQYEMPFHWH-IEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKL 75 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEENQLLQP--HSCPVIAAGQGKEVIKT-LFNELS 135 H S + + + + L+ H I K I + L Sbjct: 76 HGG-SPKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFD 134 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 I + + + S L + A+ E + + K +K L + +Y + Sbjct: 135 AIRSEEEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAK 194 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 +TL++LS++ S Y C F + +PI+Y+ R+ +A + ++ +E + +I++R Sbjct: 195 PLTLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRC 254 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRRQFK 283 G+ + +F K F ++ G +P Y+ +K Sbjct: 255 GFNDFSYFIKTFKKYKGITPKKYQMMWK 282 >UniRef50_UPI0001789626 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789626 Length = 305 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 115/294 (39%), Gaps = 21/294 (7%) Query: 9 ASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTID----SSLYV 64 + L PR + + +E +H HD+ TE++Y+ GV R + + Sbjct: 6 FQQMLEEGDYVPRFYAYYYKQWMNYEMPYHQHDS-TEIMYMISGVCRIDVKAGDTEKSVI 64 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA-----------EENQLLQPH 113 + +V++ G H + D + +G EE L Sbjct: 65 LKKGEFMVLDAGVPHRLIVDQAASCRMLNVEFGFMESEGMAPSLRHIVGEEEEVSFLLKR 124 Query: 114 SCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ 173 + +EV L + + + + + + + A L + ++ RS+ Sbjct: 125 PFRYLVLADQEEVYPVLKSLVLELDQRGTDGR--MMTHALFIQLLVCIARLYEERERSD- 181 Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 + D IK + YL+ NY +I ++ ++ + Y+ F + + Y+ R Sbjct: 182 -MQQSDFYIKRSVDYLHQNYDRQIQVKDVAAEVNLHPGYLHRVFRRGTGRTITEYLTTIR 240 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR-RQFKNCF 286 M +AK L T++ EIS VG + +F LF ++ G +P +YR R+ +N + Sbjct: 241 MEKAKMLLEQTDIPIHEISDYVGVGSRQYFHMLFKKYTGSTPVEYRLRKDRNAW 294 >UniRef50_C9KIY1 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIY1_9FIRM Length = 298 Score = 176 bits (448), Expect = 6e-43, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 111/290 (38%), Gaps = 13/290 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 D + + G D + H HD E E I G + + Sbjct: 11 DKNQKEITRHGSVLFPVACYEDDMACTDVPIHWHD-EFEYILAFNGTIHLHVGTEPITLR 69 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV-------IA 119 ++I G LH+V+ + P+ + ++ G+ ++ Q P Sbjct: 70 QGAGILINAGLLHSVSHSLRKPSILRSLVVHPDLIAGSPQSCYWQKLVLPFYGRQNLPFL 129 Query: 120 AGQGKE----VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 +G E I L + Q + T A + L IL +N ++ + Sbjct: 130 LMEGNEPWHATIAHLMMHAWDAITQETEAYTIEARYALSKALHILC-QNLPSSPPTISRD 188 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 + +K +L Y+ +Y E I+ + L + S S + F K SP+NY+ R+ Sbjct: 189 VSLLERMKLLLQYIEQHYMETISNQTLMRLAACSESVLLRSFKKTVGTSPMNYLQNYRIQ 248 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 +A L +T+++ +EI+ G+ ++ +F K+F R G +P +R + Sbjct: 249 QASSLLLSTDMTSSEIAIATGFHDISYFTKIFHRTTGLAPQRFRAAHRTK 298 >UniRef50_C0ZDD0 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZDD0_BREBN Length = 298 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 9/250 (3%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIE-RGRLHAVASDVNDPATTCTCALYGFQFQGA 104 Y G R I Y A ++E S +D L G Q Sbjct: 57 FQYTISGSGRLDIGEKSYPLRAGKTFLVEVPSCHRYYFSGESDHWEFVYITLVGS--QAT 114 Query: 105 EENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN 164 E + +Q + PV++ ++++ L + K A AY + Y Sbjct: 115 ECWEYIQANGGPVLSIPPEAKLVQLLLKIYQEVCE--KRVTDLYCSSAKAYEFVMECYRF 172 Query: 165 FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 KN + + I + + ++ +Y+E I+L ++ S Y+ + F + + Sbjct: 173 MKNI---DNPSKQVPDRISEAVCFIQAHYKETISLGDIANAAGLSRYYLINLFREYLNTT 229 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 P+ Y+ + R+ +A LT T LS +I+ +GY N ++F K+F + +G SP +R + KN Sbjct: 230 PLQYITKLRIEKAMDLLTQTNLSVNDIALAIGYANANYFNKVFKKLIGTSPGQFR-ECKN 288 Query: 285 CFAEQEILSE 294 IL E Sbjct: 289 SLPTTHILIE 298 >UniRef50_B8I274 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I274_CLOCE Length = 276 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 51/255 (20%), Positives = 108/255 (42%), Gaps = 6/255 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H+H + EL+YV+ G T++ + D+ V +H+ + + C + Sbjct: 24 PHLH-AQLELLYVEDGEIEITVNGCTRLLKKGDLSVSFPNSVHSYNTPPHQERMNCIVVI 82 Query: 97 YGFQFQGAEENQLLQPHS-CPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS-LWDAFA 154 G N LL+ H P I++ + + N L +++ + + A+ Sbjct: 83 LNLILAGDFINTLLKFHPKVPFISSDNLHKDVPYAINTLYEEYNYAQSKPVYTPICKAYI 142 Query: 155 YTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYIC 214 + + + ++ Y +I DI+ Y+N NY + I+L +S+ Y+ Sbjct: 143 QIIISRLLQQMELITNTDVNYFD---IIFDIINYINENYMQPISLNDMSRALGVGKHYLS 199 Query: 215 HEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCS 274 F+ + +IS +Y+ R++ A L NT + +I++ G++++ F + F + S Sbjct: 200 RVFSDKIKISFSDYINGIRVSWACNMLLNTNKNITQIAYDCGFQSIRTFNRAFHKACHVS 259 Query: 275 PSDYRRQFKNCFAEQ 289 PS +R+ + Sbjct: 260 PSKFRKSQVAALPRE 274 >UniRef50_Q0SUX5 Lactose operon transcriptional activator n=9 Tax=Clostridium perfringens RepID=Q0SUX5_CLOPS Length = 279 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 10/245 (4%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 + YV KG F + +Y DI ++ +G + ++DP Y F G+ Sbjct: 41 IHYVTKGYGTFKFNGKVYTLKQGDIFILLKGMQVEYVASIDDPWEY-----YWIGFSGSN 95 Query: 106 ENQLLQPHSCP---VIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY 162 N+ L S V + ++ + + N + + + L Y+L Sbjct: 96 ANEYLNRTSITNSCVANCKENSKIPQIILNMCEISKTYNPSKSDDILLLKELYSLLYTLI 155 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 E F + E + I+D L ++N+NY IT+++++ S SY+ F K Sbjct: 156 EEFPKPF--EYKDKELHTYIQDALNFINSNYMHSITVQEIADYVNLSRSYLYKMFIKNLG 213 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ISP Y+I RM +A L T+L E++ VGY + F+K F +H SP +YR Sbjct: 214 ISPQRYLINLRMYKATLLLKGTKLPIGEVASSVGYSDSLLFSKTFSKHFSMSPLNYRNNQ 273 Query: 283 KNCFA 287 N + Sbjct: 274 VNKTS 278 >UniRef50_A4BH94 Transcriptional regulator, AraC/XylS family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BH94_9GAMM Length = 305 Score = 176 bits (447), Expect = 7e-43, Method: Composition-based stats. Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 7/253 (2%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 G H H TE ++V +G R ++ Y D++ I HA + +D C Sbjct: 26 GLHRHQA-TEALWVLQGAIRVQVNDHQYSLRDGDLLFINADDHHATEAASDDNLVLC--- 81 Query: 96 LYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAY 155 +F+ + S PV+ A ++T L + + A Sbjct: 82 -LQHRFEELVNVSVAPGTSNPVLKARLND--LRTTLAHLWWEQKYQPAHWQLATENGLAQ 138 Query: 156 TLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICH 215 IL + + I+ I YL +YRE I+L LS+ F S +Y+ H Sbjct: 139 LQLILLRYFSSASPAPAESRDDASWRIQQITRYLEAHYREPISLTSLSEHFGLSETYLSH 198 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 F + + + ++ Q R+ L T+ + AE++ G+ ++ F F R C+P Sbjct: 199 YFKDKTGSTLVRWLTQLRLERCLPDLIQTDSTVAELALEHGFPSIKAFNSAFKREYQCTP 258 Query: 276 SDYRRQFKNCFAE 288 S++R+Q ++ + Sbjct: 259 SEFRQQQQSAPST 271 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 19/262 (7%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD ++ YV KG T+ +Y DI VI LH+V+ ++ C Sbjct: 47 HCHD-YFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFM 105 Query: 98 GFQFQGAEENQ----------LLQPHSCPVIAAGQGKEV-------IKTLFNELSVILPQ 140 + Q L+ + A + ++ + ++ + + Sbjct: 106 PSFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYER 165 Query: 141 SKNSQTSSLWDAFAYTLAILYYE-NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 SL L+IL + N + + K ++ ++ +++N+Y+E + L Sbjct: 166 RTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNL 225 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 L S S C F + + Y+ R+ +A L ELS ++ + G+ Sbjct: 226 NDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNE 285 Query: 260 VDHFAKLFLRHVGCSPSDYRRQ 281 + +F ++F ++ G SP+D+R+Q Sbjct: 286 LSYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 10/248 (4%) Query: 41 DNETELIYVKKGVARF-TIDSS----LYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 N YV G + DS Y + + +I +++ ++D + P Sbjct: 38 RNHYLFHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQVNTYSADRDHPWEYTWLE 97 Query: 96 LYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAY 155 G + + A E L + PV + +++ L NE+ I S S + + + Sbjct: 98 FDGLRVKEALELAGLTMDN-PVYHSNA-RDLSLELKNEMLYIANHSDQSPFHLIGHLYLF 155 Query: 156 TLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICH 215 + Y ++ R +G +D I++ ++ N++ I++E ++ + SY Sbjct: 156 ---LDYLTRSSSSRRMMRGGKLQDFYIREATSFIEQNFQNDISVEDIAAFCNLNRSYFGK 212 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 F SP ++I RMT+A L TEL+ +I VGY + HF++ F + G SP Sbjct: 213 IFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGYPSQLHFSRAFKKTYGISP 272 Query: 276 SDYRRQFK 283 ++R + K Sbjct: 273 REWRSENK 280 >UniRef50_B7RWJ7 Transcriptional regulator, AraC family n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RWJ7_9GAMM Length = 293 Score = 176 bits (447), Expect = 8e-43, Method: Composition-based stats. Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 15/249 (6%) Query: 40 HDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGF 99 HD+ L+Y G + T+ A I+++ +G H +D +DP T LY Sbjct: 56 HDDNL-LLYCTSGRGQLTVGDWHSQVTAGHIMLLPQGLAHTYEADGDDPWT-----LYWV 109 Query: 100 QFQGAEENQLLQP----HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAY 155 FQGA +Q P+ AG +I N L V + T + +A + Sbjct: 110 HFQGASTRVFMQYLGYREDRPLTNAGVSPLLIGAFTNLLEV---RRTGYSTRAFINASNH 166 Query: 156 TLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICH 215 ++ + + + G ++ + + Y+ + + ITL+ L++ S + + Sbjct: 167 LRHLITQMSME--ISAHAGRLQSGFELDHVQAYMLEHIDQTITLDALAQVANMSKYHFSN 224 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 + PI + + +M A L +T++ +EI+ VGY++ +F++LF R VG SP Sbjct: 225 RYKTLTGYPPIKHFLNMKMEHACHLLDSTDMGVSEIARGVGYDDPLYFSRLFSRTVGSSP 284 Query: 276 SDYRRQFKN 284 YR + Sbjct: 285 RGYRSSTRK 293 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 100/287 (34%), Gaps = 13/287 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 D + G + + H H+ E E I KG ++ + Sbjct: 47 DAEGREMVQHGSALFPIACYAENLKSYSVAWHWHE-EFEYILAMKGPLTVDVNKTRVTLQ 105 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG--- 123 + V + G LHAV A ++ + G + Q P++ Sbjct: 106 TNQGVFLNSGILHAVEQAEKGEA-LLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFF 164 Query: 124 --------KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 + + E + + + + L +L + + Q Sbjct: 165 LLDEAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQE 224 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 +K +L ++ +Y E++T+E+++ S S F + I+PI YV Q R+ Sbjct: 225 QIAAERMKQMLRFVEEHYAEELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVE 284 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +A L +T L EI G+ + +F K F C+P +YR +F Sbjct: 285 KAAELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_A8S1P5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S1P5_9CLOT Length = 309 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 109/270 (40%), Gaps = 11/270 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H N+ E+ Y+ +G F ++ YVA + D+++++ +H S + LY Sbjct: 30 HFH-NQYEIFYIIEGERLFFFNNREYVARSGDLILVDTNLIHMTKSVTAEDTGHNRVILY 88 Query: 98 GF---------QFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS-KNSQTS 147 Q+ + + H + + + + L + + + N + Sbjct: 89 VSYDRMKAFDGQYPSLQLVRFFHEHYGVYHLDKEQQALFLNFYRNLRIAMTEKAHNYKVG 148 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + + I Y + + K I YL+ N + I+LE+L+ F Sbjct: 149 IDLETLTWLFKITSYVSKQEGASPHSSDHPKYRTAYAIADYLSENCEQNISLEELAAHFY 208 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 S Y+C F + + Y R+ +AK L T++S +EI+ +GYE++ +F ++F Sbjct: 209 LSKYYVCRTFKEITGYTVTEYTNIHRIRKAKRLLEETDMSISEIAHELGYESLTYFERMF 268 Query: 268 LRHVGCSPSDYRRQFKNCFAEQEILSEFPQ 297 + SP YR+ E +EF + Sbjct: 269 KSFMTISPLKYRKTLNTVTYTNEQTTEFEE 298 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 13/255 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL- 96 H H+ E ++ KG I+ Y H + I + LH + +D+ + Sbjct: 39 HWHE-ELQITLATKGNLTIQINGIDYRLHTGQAIFINKSVLH-IVTDLTAEGEYVSFNFP 96 Query: 97 ---YGFQFQGAEENQLLQPHSCPVIAAGQGK---EVIKTLFNELSVILPQSKNSQ----T 146 F A E + P + + + + K E K + N L + + + + Sbjct: 97 EKLLAFYSDSAMEKNYVLPFTNSYLLSFEIKGDTEWQKQILNILWSMKKEFEIKKSWGWQ 156 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + IL + S + K ++ +L +++ NY ITL++++ Sbjct: 157 YEISIKTVQLWLILISNISLPSEESSKHNRLKQERLQLMLSFIHQNYSNPITLKEIADAA 216 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 SVS F R++P +Y+++ R+ ++ L +TE + EI+ RVG+ V+HF + Sbjct: 217 HLSVSECTRSFKTSIRMTPYSYLVKYRINKSCELLQSTEYTITEIASRVGFNQVNHFIQA 276 Query: 267 FLRHVGCSPSDYRRQ 281 F + + +P ++R+ Sbjct: 277 FKKDLKLTPKEFRKN 291 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 107/268 (39%), Gaps = 8/268 (2%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P++ A + G + H + E+ + G + I+ D+++ G Sbjct: 10 NPQILYVANCYTNEVRIGDNHHHDFLEISIIYDGKVIYDIEGERVELEKGDMLIFNPGVK 69 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVIL 138 H ++ F +G N P + + I ++ ++ Sbjct: 70 HYDITEPGMTNAQLHIGFRNFTLEGYSRNTF--PFKKAFLRKKEEDSAILSISKQIIEEK 127 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYE-----NFKNAYRSEQGYIKKDVLIKDILFYLNNNY 193 K L + + E N + +K +L+ +I+ Y+ ++ Sbjct: 128 DAEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQLLVNEIIHYMEKHH 187 Query: 194 REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISW 253 E ++L LS+ S +YI F +E SPINY+I+ R++ A+ L N ++ + + Sbjct: 188 TEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLSRAEELLKNKNITVKQAAN 247 Query: 254 RVGYENVDHFAKLFLRHVGCSPSD-YRR 280 VGY + +F+KLF ++ G PS+ +R+ Sbjct: 248 MVGYNDAYYFSKLFKKYYGFPPSENWRK 275 >UniRef50_C0C0R7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0R7_9CLOT Length = 322 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 13/240 (5%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + LIY +G ++ Y D I +GR H +D DP + + F+ Sbjct: 87 QYILIYCTEGKGCIEVEDRTYHIGRSDAFCIPKGRRHKYYADPEDPWS-----ILWAHFK 141 Query: 103 GAEENQLLQPHSCPVIA--AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 G E C V+ + Q + LF L +L ++ T + + L+++ Sbjct: 142 G-EVTLCYPLEECRVVHMNSRQSDNRMMVLFKLLFRVLERN---YTLGNFIYISQVLSLI 197 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 E + E + V + ++ ++ N + +TLE++S++ + S SY+ F + Sbjct: 198 LSEIYFREKTDESTVQDRHVTM--VIRFMYENLKRSLTLEEISEEVKLSRSYLNTIFKTQ 255 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 SP+ + I +M EA L T++ E+S +GYE+ +F+++F + VG SP DY+ Sbjct: 256 TGRSPVEFFIHLKMQEACKLLKATDMYIYEVSSELGYEDQYYFSRIFKKVVGVSPRDYKN 315 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 21/266 (7%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 + HH H+ E E+IY ++G I+ Y + +I+ G LH + S+ + Sbjct: 40 AKHHWHE-ELEIIYFEQGCFHLEINMEKYEIEEECFCLIKSGDLHYIYSEKDYREMAFVF 98 Query: 95 ALYGFQFQGAE--ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN--------- 143 +L + A+ + +L+QP + ++ F L Q + Sbjct: 99 SLSMLRAFAADPVQEKLVQPLAEGSLSLPGLIYRQNPCFVILKREFLQIADAAGLPSGAS 158 Query: 144 --------SQTSSLWDAFAYTLAILYYENFKNAYR-SEQGYIKKDVLIKDILFYLNNNYR 194 S A A L I + +N S+ ++ +K L Y+ + Sbjct: 159 NLRSQYRVSSLPQYMRAKASLLNIFAAFSEQNLLAVSQMPADRRVDTVKKTLSYMQEHMT 218 Query: 195 EKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWR 254 EK+T+++L+ + + Y C F K PI Y+ + R+ A L T+ S EI+ Sbjct: 219 EKVTMQELAAQANMNEQYFCRFFKKIIGRPPITYLNEMRIRYACRLLKETDHSVTEIALE 278 Query: 255 VGYENVDHFAKLFLRHVGCSPSDYRR 280 G+ N+ +F + F GC+P YR+ Sbjct: 279 SGFNNLGNFMRTFRLVCGCTPLQYRK 304 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 92/253 (36%), Gaps = 16/253 (6%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H + E+I+VKKG R ++ A + DI V+ G LHA+ + Sbjct: 121 HWHKS-MEIIFVKKGTGRIQTGRNMQEARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFE 179 Query: 98 GFQFQGAEENQLLQPHSCPVIA-----------AGQGKEVIKTLFNELSVILPQSKNSQT 146 G + + + P+ + G + I + + Sbjct: 180 VEFLGGGAADVCDKEYLVPLASGQLLQPAVFSPVDAGYKQISACLRRAEELCSARERGYE 239 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + A + + + +K +L + +Y + +T+ ++ Sbjct: 240 LGVKAALLEL----LLYLLRMCPEAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVC 295 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S S+ F + SP+ Y+ +RR+ A +L T+ I+ G+EN+ +F + Sbjct: 296 GCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQ 355 Query: 267 FLRHVGCSPSDYR 279 F + G +P YR Sbjct: 356 FKKRYGVTPRAYR 368 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 14/263 (5%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 H HD E EL Y+ G + H D + I G LH + Sbjct: 42 PWHWHD-EFELGYISGGSVVYQTSGLTVTLHEGDGIFINSGVLHYLHPLEPCREARLQTQ 100 Query: 96 LYGFQFQGAEENQLL------------QPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 + F LL Q + P+ + + + + + + Sbjct: 101 FFDKSFLAGSLGSLLDIKYVAPVLDQRQLEAVPLYRSDPESKGFLECLQKGVELCSRKEE 160 Query: 144 SQTSSLWDAFAYTLAILYY-ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 L + F+ +Y K + +D IK ++ Y+ ++ EKI++ + Sbjct: 161 FFELRLRNLFSELWESIYRWAAQKESSTPSLRRSIEDDRIKQMMRYVQAHFSEKISVSSI 220 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 + S F I+PI Y+I R+ A+ L NT S +I+ G+ + + Sbjct: 221 AASIPISERECYRLFQNSMGITPIEYLISVRLQNAQSLLMNTNKSILDIALETGFGSSSY 280 Query: 263 FAKLFLRHVGCSPSDYRRQFKNC 285 F K+F H +P+ YR + Sbjct: 281 FGKIFRSHHRLTPAQYRNLSRQK 303 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 100/261 (38%), Gaps = 9/261 (3%) Query: 29 DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDP 88 + ++ +H H E E+I + +G ID +A +DI+ + G H ND Sbjct: 27 NHSRYNMPYHWH-TECEIIRILEGEFILFIDKEKILAKKNDIIFVHSGIFHGGL--PNDC 83 Query: 89 ATTCTCALYGFQFQGAEE-----NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 C + ++ + + + L + Sbjct: 84 IYECIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKLPSNVQALNNCCTSLFEAMRVKST 143 Query: 144 SQTSSLWDAFAYTL-AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 A Y + IL + + + + ++ + +K+++ + N Y+ +TLE L Sbjct: 144 GYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQLKNVITLIENEYQNPLTLEDL 203 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 SK S Y C F + +PI Y+ R+ + L TELS EI+ G+ +V + Sbjct: 204 SKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKLLATELSITEIALNCGFNDVSY 263 Query: 263 FAKLFLRHVGCSPSDYRRQFK 283 F K F +H G +P Y + K Sbjct: 264 FIKTFKKHKGVTPKQYLKSLK 284 >UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW55_9CLOT Length = 286 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 91/244 (37%), Gaps = 6/244 (2%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 + + +V +G +T++ + +I +D DP C G Sbjct: 41 RDFYLIHFVMEGGGVYTLNGRKHPVRKGQAFLIYPSMPIDYQADAADPWEFCWVGFNGND 100 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + P PVI E ++ L + + + A Y L Sbjct: 101 ARLLMNATGFTP-QNPVITLKD-PERMEELLMNIYRC--RGHHPHEFINMTAKLYELLAF 156 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 + + ++ + ++ ++ ++Y++ IT+ ++ S + F Sbjct: 157 LIQEASDPMPAQSRTGVEH--VQRACDFIASHYQDPITINDIAGHVGICRSRLYRVFKAH 214 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ISP+ Y+ + R+ EA + + + E+++ G+ + +F+ +F + +G SP +Y + Sbjct: 215 LSISPLQYLTEFRLREACNLMNRQKATVKEVAYAAGFSDPLYFSTVFKKSLGQSPKEYMK 274 Query: 281 QFKN 284 K Sbjct: 275 SSKG 278 >UniRef50_A7B0C8 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0C8_RUMGN Length = 301 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 13/272 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H NE E+ ++ +G F ++ Y +++++ +H + +D LY Sbjct: 30 HFH-NEYEIYFLTEGERLFFFNNRAYQVKKGSLILVDTNLIHMTHAPEDDTTGYTRIILY 88 Query: 98 GFQFQGAEENQ---------LLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS 148 +F+ + ++ + H + +E ++ L S + Sbjct: 89 IDKFKMQQFDEKFPHLNLVPFFREHYGVYNLTQKQQEKFLHMYEVLKTEFSNRSRSYKAL 148 Query: 149 LWDAFAYTLAILYYENFKNAYRSEQ---GYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 + + +N + ++ K I +I Y++++Y E I+L+ L+ Sbjct: 149 IEMEIIHYFIDFIRDNPELTPIKDETAIHKSSKYQTIYNIADYISDHYAESISLDGLAGV 208 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 F S Y+ F + YV R AK L T LS +EI+ VGYE++ +F K Sbjct: 209 FYLSKFYLSRSFKEVTGYGVNEYVNILRTKRAKQLLEETTLSVSEIAGTVGYESITYFEK 268 Query: 266 LFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQ 297 +F ++ SP YR+ + +I E P+ Sbjct: 269 VFKTYMSISPLKYRKTLNGITYKNKITPEAPK 300 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 59/271 (21%), Positives = 102/271 (37%), Gaps = 29/271 (10%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 HH H+ E EL+Y G ++ + + I G LH+++ + N Sbjct: 38 HHWHE-EVELLYFSGGEFCLEVNMERFNISEECFYFINPGELHSISVEKNGGCVENAVVF 96 Query: 97 YGFQFQGAE-----ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN-------- 143 + A + L+QP I + + F + + +N Sbjct: 97 HMDMLNSAYALDQIQTNLIQPVQNGSIQFPRCLRKNEPAFEPVRKSYEEIRNVFGGDSFR 156 Query: 144 -------------SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 ++ + A LA+L N +E+ + + IK L Y+ Sbjct: 157 ENYYDGEAVTDDITRQLFIKSALLRILAVLSANNLFEV--TEKNHDHRIETIKTTLTYIQ 214 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 NY+EKI + L+ + Y C F K SP+ YV + R+ A L ++L+ E Sbjct: 215 ENYKEKIYIRDLAGLIGMNEQYFCRFFKKVIGRSPMEYVNEYRIKRAIHYLKESDLTVTE 274 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 I GY N+ +F + F ++ +P YRR Sbjct: 275 ICLECGYNNLGNFLREFRKYTSTTPLQYRRH 305 >UniRef50_UPI00016C01F8 transcriptional regulator n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01F8 Length = 265 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 8/241 (3%) Query: 40 HDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGF 99 H + +L + +G T + + Y DI+ + +G L++ A++ + P C Sbjct: 28 HPDVNKLYLILEGEGSVTCNKTEYYPEVGDIMFVPKGSLNSYATNKDKPYKKYWCHFDAD 87 Query: 100 QFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAI 159 L S P++ K++ LF +L V +SKN + A + Sbjct: 88 ILSTDIAVYL----SFPLLVKNANKKISYKLFAKL-VKYHESKNPIDAIYAKALLLRIIH 142 Query: 160 LYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTK 219 Y+ + + + ++ ++ Y++ N KITL +L+K + +Y+C F+ Sbjct: 143 FYFSECEFV---KINDVPNQTVMGKLVKYIDENLERKITLTELAKFAHLNANYLCTLFSS 199 Query: 220 EYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 + +PI Y+ +++ +AK L T + EIS +G+ + +F+ +F + +G SPS +R Sbjct: 200 TFGQTPIEYITNKKIEKAKILLRTTTDTIEEISNTLGFSSPFYFSAVFKKRIGYSPSQFR 259 Query: 280 R 280 + Sbjct: 260 Q 260 >UniRef50_UPI0001B4A5A3 transcriptional regulator n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B4A5A3 Length = 302 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 116/275 (42%), Gaps = 17/275 (6%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 L+V ++ S H+ LIY +G ++I D + Sbjct: 42 LYVTDIGYYPHATGHYRARRYGSQQHI------LIYCTEGEGWYSIHGQRQKVCKDQFFI 95 Query: 73 IERGRLHAVASDVNDPATTCTCALYG--FQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL 130 IE G H A+ N P + G + N+L + P ++ + + Sbjct: 96 IEAGLPHIYAASENSPWSIYWLHFTGEKSHLFNSFYNKLHKIDESPNARIKDRMQLFEEI 155 Query: 131 FNELSVILP-QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYL 189 + L + ++ T LW + + + F+ R++QG + ++ + Y+ Sbjct: 156 YQNLEMGYSIENLEYTTLCLWH---FIASFKFVSQFREINRAKQGDVT-----QEAISYM 207 Query: 190 NNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQA 249 N +K++L+ ++ S S+ F K+ +P+NY Q ++ +A L ++L Sbjct: 208 RKNIEKKLSLDDIAGSVNYSSSHFGQVFLKKSGYTPLNYFNQLKIQKACQLLDFSDLKIK 267 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 EI+ ++G+ + HF+K+F + +G +PS Y+++ K Sbjct: 268 EIAEQLGFYDQYHFSKVFYKQIGETPSSYKKRNKG 302 >UniRef50_C5ET70 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET70_9FIRM Length = 273 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 60/256 (23%), Positives = 97/256 (37%), Gaps = 9/256 (3%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H+ EL Y++ G D +LY ++ + ++ +H D Sbjct: 23 HYHE-YFELYYLESGKRYHIADDTLYCLNSGEFILFPPYVMHHSYGDSGVSFKRLVLYFT 81 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTL 157 +L H+ + K L L + N +L+ Sbjct: 82 KEMIAVPGVTDVLDQHAW--VYKSDEKNETHALLRALLKEQEFNDNYSEEALY------F 133 Query: 158 AILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEF 217 + +E +K I I+ YL+ NY ITL +L+++F S Y+C EF Sbjct: 134 ILNQILILLLRNSTETAKPEKQSRITSIIHYLHENYTYPITLNELAEQFYLSPYYLCREF 193 Query: 218 TKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD 277 K + + Y+ R+ A+ T+ S EIS VG+ NV HF +++ G SPS Sbjct: 194 KKYTNSTIVQYINSLRVGHAQRLFMETDKSVTEISKIVGFSNVTHFNRVYRSVTGLSPSK 253 Query: 278 YRRQFKNCFAEQEILS 293 R+Q K A E Sbjct: 254 SRKQAKERSAAMERHG 269 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 175 bits (443), Expect = 2e-42, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 92/245 (37%), Gaps = 8/245 (3%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 L V +G F +D+ Y +IE + +D +P F G Sbjct: 38 LHIVLEGKGIFVVDNKKYFLEKGQGFIIEPNIVTFYQADAKNPWKYFWIG-----FDGEG 92 Query: 106 ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL-WDAFAYTLAILYYEN 164 + L+ + + LF+ L +L + + L Y L E Sbjct: 93 AEKYLRELGIIQHKPIFRTDKLDELFSLLKEMLKRKNLTLAEELKLQGLFYEFFSLIVE- 151 Query: 165 FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 +N+ + + + + I+ Y+ NNY + I + + + + SY+ F K I+ Sbjct: 152 -ENSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEYVGLNRSYLSTLFKKNMGIT 210 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 Y+ R++ A L T S ++ GY++ F K + + G +P+ +R++ + Sbjct: 211 IQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTKAYKKKYGVTPTQHRKKDRK 270 Query: 285 CFAEQ 289 E Sbjct: 271 EAKEN 275 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 5/247 (2%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H + E+ + G F I V H DIV+I LH + ++ Sbjct: 29 HFH-STYEIFCLMSGKREFFIKDRTLVIHEGDIVIISPNILHRTTNTETPEHERLIVNIH 87 Query: 98 GFQFQGAEENQLLQPHSCP----VIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAF 153 +L P S V Q + I+T+ + + + K Sbjct: 88 EKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIETMLQTMIAEMSEKKPGFELYALTLA 147 Query: 154 AYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYI 213 L I ++ + + I +++ Y+N++Y +++L L++KF S Y+ Sbjct: 148 LQLLLICCRHAKSSSMETLESPSPMHERISEVVRYMNSHYMNELSLHLLAEKFYVSPYYL 207 Query: 214 CHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGC 273 F + + + Y+ R+ EAK L + + I+ RVG+ +V HF ++F G Sbjct: 208 SRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKVNLIAKRVGFGSVTHFGRVFKSVTGY 267 Query: 274 SPSDYRR 280 P YR+ Sbjct: 268 VPLHYRK 274 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 97/264 (36%), Gaps = 13/264 (4%) Query: 29 DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDP 88 D P H H E+ + GV + + + D + + + LH + Sbjct: 31 DLPDRAGPVHWHP-YFEIATAQSGVLDYQVGQTHIRLEPGDSIFVNQNMLHGIRQLSGAA 89 Query: 89 ATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK-----------EVIKTLFNELSVI 137 ++ E + + + + PV+ + ++ + Sbjct: 90 PDPLPILVFSGTVVAPEHSAVYRKYIQPVLGCSTLPFVVFRHDSDLWQAVRQQIHRACDA 149 Query: 138 LPQSKNSQTSSLWDAFAYTLAILYYE-NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREK 196 + + ++ + L ++ + S + + + ++ +L YL +Y + Sbjct: 150 MRERPACYELTVQRSLCSVLEAIFRHLDSLPPLPSSRVQLTAQIRLQKMLSYLYEHYAQP 209 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 +TL ++ S S F SP+ +IQ R+ A L T+++Q EIS G Sbjct: 210 VTLADIAAAAHISRSEAGRCFQAYLGCSPVEALIQYRLQRAWRMLQETDMTQQEISLACG 269 Query: 257 YENVDHFAKLFLRHVGCSPSDYRR 280 + +V +F + F + GC+P + R+ Sbjct: 270 FHSVQYFRRQFRKRYGCAPGEKRK 293 >UniRef50_A1U2J4 Transcriptional regulator, AraC family n=3 Tax=Marinobacter RepID=A1U2J4_MARAV Length = 306 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 104/263 (39%), Gaps = 8/263 (3%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 F H H + LIY G A + Y A D++++ G H Sbjct: 52 PLAFGHYRRAAGHHMHREHHRDNLLIYCTDGKAFLNVAGEPYTVTAGDLLLLPAGVSHRY 111 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 +D ++P T ++ + G Q + L + + +L Sbjct: 112 TADPDNPWT-----IHWVHYTGPLAEDFGQYMGFDDSTRIRHLGRQPRLLVDFNGLLSVR 166 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + + L L NA + Q + + + ++ + E++TL Q Sbjct: 167 QTGFRARGLIHASNRLRQLLAAVPINADETSQARQAE---LDSLHSFMREHLEERLTLNQ 223 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L++ S ++ + ++ SPI + + ++ A L T S A+IS ++GY++ Sbjct: 224 LAELSGLSPAHFATRYREQTGTSPIQHFLHLKVERACELLDTTSQSFADISRQLGYDDAY 283 Query: 262 HFAKLFLRHVGCSPSDYRRQFKN 284 +F++LF + +G SP+DYR ++ Sbjct: 284 YFSRLFKKVMGKSPTDYRHTARH 306 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 99/251 (39%), Gaps = 8/251 (3%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC--- 94 H+H N E+ Y+ G RF ++ +LY ++++IE G LH Sbjct: 24 HLH-NFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHRTTYISGGSHERICITFS 82 Query: 95 -ALYGFQFQGAEENQLLQPHSCPVIAAGQGK-EVIKTLFNELSVILPQSKNSQTSSLWDA 152 + FQ E +L+ S P + Q + E + L ++ + Sbjct: 83 KSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAHREMMYQDTYSLYLASSH 142 Query: 153 FAYTLAILYYENFKNAYRSEQGY--IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 + + N + Y D +++ Y+ +NY+ +TLE+ + S Sbjct: 143 VYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNYQSPVTLEETAAYCNMST 202 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 +Y +F Y+I R+ EA L +T+L EI+ G+ + ++F +F R Sbjct: 203 TYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIALLSGFNDSNYFGDVFKRM 262 Query: 271 VGCSPSDYRRQ 281 G SP YR+ Sbjct: 263 KGISPCKYRKN 273 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 174 bits (442), Expect = 3e-42, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 11/269 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H HD E E++ V +G + +I S+ ++ +I+ +H + S N+ Sbjct: 23 NYPPHWHD-EIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQSLENESLLQII 81 Query: 94 CALYGF---QFQ-----GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 Y F F E N L + A K++I + N LSV + Sbjct: 82 QINYKFMETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLSVRNQGYEFHV 141 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 S+++ F ++ + Y + +K I+ Y+ NY +I + L++ Sbjct: 142 ISAIYKVFGSIISNVPYTISTEDELEKNNITFN--RMKKIIEYIEQNYMNEININTLAEI 199 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 + YI H F K +S Y+ RM +A L E S I G++N+ +F K Sbjct: 200 LHLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYK 259 Query: 266 LFLRHVGCSPSDYRRQFKNCFAEQEILSE 294 +F CSP +Y+ + ++ SE Sbjct: 260 VFREVYKCSPLEYKNNRQERSNKKVHESE 288 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 98/274 (35%), Gaps = 15/274 (5%) Query: 20 PRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 P++ + + + G H HD TE +YV G + + D+++++ G H Sbjct: 19 PKIMAYYYKQWEDFHMGFHQHDW-TEFMYVISGNCTVETNKDVIAMRKGDLIMLDAGVPH 77 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL--------- 130 + + P GFQ + Q + + + ++ + T+ Sbjct: 78 RLIVESGSPCRMLNVEF-GFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYEDIQ 136 Query: 131 --FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK--DVLIKDIL 186 L L + ++ L + + ++ ++ Sbjct: 137 VNLRNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQAT 196 Query: 187 FYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTEL 246 Y++ Y I + ++ Y+ F + Y++ RM +AK L T++ Sbjct: 197 EYIHQYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLARTDV 256 Query: 247 SQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 E++ +G + +F+ LF + G SP++YR+ Sbjct: 257 PIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRK 290 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 14/256 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD E E IY+ G A ID ++ D ++I G +H + N + Sbjct: 38 HWHD-EMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIHYMIGKENSKISYVALVFN 96 Query: 98 GFQFQGAEENQLLQPHSCPVIA-----------AGQGKEVIKTLFNELSVILPQSKNSQT 146 +G + P++ + G I FN + Sbjct: 97 LSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSYGFQ 156 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIK--KDVLIKDILFYLNNNYREKITLEQLSK 204 + + + ++ E + + + + Y K +K+++ Y+ NY+ I++++L+ Sbjct: 157 LEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVENLKEVIKYIQTNYKNPISIKELAD 216 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + S + F + + Y+ R+ +A L +T LS EI++ VG+ +V +F Sbjct: 217 IAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFGDVSYFI 276 Query: 265 KLFLRHVGCSPSDYRR 280 K F + + SP+ YR+ Sbjct: 277 KTFKKFLSISPTKYRK 292 >UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA Length = 298 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 109/258 (42%), Gaps = 6/258 (2%) Query: 34 ESGHH-VHDN----ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDP 88 ++ +H VH + E LI+ G + ++ + IV++ G+ H + +DP Sbjct: 42 KARYHFVHRDRGTEEWILIFCTHGKGVVKSATEEWLIESGSIVLLPPGKEHTYYAFDDDP 101 Query: 89 ATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS 148 G + LQ + VI E ++ L ++ ++ + Sbjct: 102 WDIFWAHFNGDSVNEYIPQEALQGNGFLVIN-KTSTEDMQMLMSQFWQMIQALSAGFSYQ 160 Query: 149 LWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRA 208 + L + Y + I + Y+ +++ EK++L L++ Sbjct: 161 SVFYSSQVLGATLAYVSLQSVLPHDSYTMGNEYITKAVKYIYDHFEEKVSLSTLTEVLDV 220 Query: 209 SVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFL 268 S SY+ F + S +++ +M +A + L +T L+ +I+ R+GY++ +F+++F Sbjct: 221 SKSYLSRIFRQTVGTSVNQFILDIKMKQACYYLKDTNLAVHQIASRLGYDDPYYFSRIFK 280 Query: 269 RHVGCSPSDYRRQFKNCF 286 + VG SP +R+Q KN Sbjct: 281 KVVGSSPRVFRKQEKNRL 298 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 8/249 (3%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 PK G + D+ + Y+ G +F + +Y D +I + +D N+P T Sbjct: 32 PKHCYGPAIRDHYL-IHYILAGKGKFHANGKIYELVTGDGFLILPDMVTFYEADENEPWT 90 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 G + E+ L ++ + E++K F ++ S + Sbjct: 91 YVWIGFRGIKAAAYLESANLNMNNL-IFNC--TSEILKEYFFKIMNANLYSSGYE----L 143 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 Y IL +A D+ ++ L Y+ NY +++ ++K + Sbjct: 144 RLQGYLSIILSELIDISAMDILDTNKHSDIYVRKALQYIETNYSGSTSVDAVAKAIGLNR 203 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 +Y F K ISP Y+I+ ++ +A L N L+ +EIS VGY + F+K+F Sbjct: 204 NYFSTIFKKHIGISPKEYIIRYKIGKACEFLKNNSLTISEISKSVGYNDPLSFSKVFKHI 263 Query: 271 VGCSPSDYR 279 G SP YR Sbjct: 264 KGVSPKYYR 272 >UniRef50_A4XJ07 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ07_CALS8 Length = 283 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 20/264 (7%) Query: 29 DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDP 88 D W+ ++VHD+ ELI+VKKG F ++ A D+++I+ H N Sbjct: 20 HDSSWKMDYNVHDS-YELIFVKKGNIEFWVEDEKIELRAGDLLIIKPHTRHKFEVVGNFK 78 Query: 89 ATTCTCALYGFQFQGAEENQL------------LQPHSCPVIAAGQGKEVIKTLFNELSV 136 A Y + ++++ L+ S P K +F L Sbjct: 79 AEFIVMGFY---LKPESKSKIEALKEIYGFLESLENISSPFYFIHIRKR--SNVFFCLES 133 Query: 137 ILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREK 196 IL ++K ++ L + L I N + K + K I Y++ NY E Sbjct: 134 ILQEAKENKKGLLLYIKSIELFIYITREMNNLEIKKGFDYSK--IAKFIKDYIDQNYMED 191 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 I + ++KK S S I F ++ I P Y++ +R+ +AK L+ + L +EI+ G Sbjct: 192 IKIGDIAKKLFMSESSISRLFKSQFGILPKEYLLSKRIEKAKEYLSVSNLKISEIAIMCG 251 Query: 257 YENVDHFAKLFLRHVGCSPSDYRR 280 + ++ F +F ++ GCSP+ YR+ Sbjct: 252 FSSLQRFNDIFKKYTGCSPTHYRK 275 >UniRef50_C6CVZ4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVZ4_PAESJ Length = 288 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 8/251 (3%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 + G V + + +V G + + + + H+ + + Sbjct: 38 NYSVGPRVIECFS-FHFVLNGSVTLSSMGETVILPKGSMFCLFPDVKHSYW--ITQYDSA 94 Query: 92 CTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 ++ F G++ L++ + L N+L + + KN Q Sbjct: 95 SPLKMHWLAFTGSQAEMLVRRIGLTEHKPYLRSRLTTELANQLQACMERMKNWQKDGDL- 153 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 L ++ Y+ F+ R ++ +K L Y+ +Y E I++ L++ S Sbjct: 154 ----QLQMMLYQLFEMLSRPLPEASEEKDWLKACLQYMQTHYAEGISVTDLAEWSGMHRS 209 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 ++ F + + ISP Y+I RM A L + LS +IS +GY ++ F++ F + Sbjct: 210 HLSSRFKQSFGISPREYLIMLRMERAVEMLQSRTLSITDISLSLGYTDLYTFSRAFSTYT 269 Query: 272 GCSPSDYRRQF 282 G SPS+YR + Sbjct: 270 GMSPSNYRSKL 280 >UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ5_9FIRM Length = 301 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 102/258 (39%), Gaps = 12/258 (4%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 +E + +V G ++ + + VI +D +P T G + Sbjct: 45 RDEFIIHFVLDGTGFYSAGGQTWSLTPGQMFVIYPNEPVTYGADETNPWTYAWIGFRGIR 104 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + + + A Q K + + +L + S+ + L L + Sbjct: 105 AHSMVKECGFSKNQLVLPAPDQ-----KIILKHIDYMLNHKQLSKANDLRRQAYLILLLA 159 Query: 161 YYENFKNAYRSEQGYIKKD-----VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICH 215 F ++ K V ++ + Y+ + Y++ I + ++ S +Y+ Sbjct: 160 ELAGFHEKQSAQNKKNAKYAYSTSVYVELAIEYIKDMYQKGIGISDIADNIGISRAYLNS 219 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 F KE +S ++I +M +A L +T LS EI+ VGYE+ F+K F + G SP Sbjct: 220 SFQKELGMSAQTFLIDYKMHKAASLLVSTSLSVKEIANNVGYEDQLVFSKAFKKKFGMSP 279 Query: 276 SDYR--RQFKNCFAEQEI 291 +Y+ ++ + F E+++ Sbjct: 280 KNYKTHKEMMDKFNEKQV 297 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 98/250 (39%), Gaps = 10/250 (4%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH-AVASDVNDPATTCTCAL 96 H HD + E+ Y+ G + I ++ + +V+I R +H +D D Sbjct: 32 HFHD-QYEIYYLLSGERHYFIKDRIFHVKSGTLVLINRQDVHRTTDADTQDHVRVLLNFS 90 Query: 97 YGFQFQGAEENQLL------QPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 + LL + P ++A Q + ++ L +++ + +L Sbjct: 91 KDYLLSSPYVIALLDGLFMNNNYVIPFLSAEQ--QYVEVLLDKMIHEIEHQSTGFQVALQ 148 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 L N + + I I+ Y+N NY+ +TL +++ F S Sbjct: 149 ALLMDLLVYTSRYIESNRHDVLAPPSQVHEKISQIVQYINTNYQTPLTLSSVAQNFFVSQ 208 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 Y+ F + + + Y+ R+ EA+ L T +IS VG+ ++ HF ++F Sbjct: 209 YYLSRTFKQATGFTFVEYINNIRIREAQRLLRETNHKVIDISEAVGFGSISHFGRVFKEV 268 Query: 271 VGCSPSDYRR 280 SP +YRR Sbjct: 269 TRFSPLNYRR 278 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 8/242 (3%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 + L Y+ KG +F ++ Y A I +D ++P G + Sbjct: 38 RSYCLLHYITKGKCKFQVNGMTYHLQAGQGFFIAPDFETRYETDGDEPWNYIWVGAAGEE 97 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + + L + P+ + QG ++ + + L + +AIL Sbjct: 98 MKHLM-HVLGLSQANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHYFR--MSTLYRFIAIL 154 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 E N Q + I +++ Y+ ++ E ++ +++ + SY+ F + Sbjct: 155 SEERQVN-----QPLASVNSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSLFRSQ 209 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ++ +Y+ RMT AK+ L +T LS A I+ GYE D + F + G SP+DYR+ Sbjct: 210 TGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPADYRK 269 Query: 281 QF 282 F Sbjct: 270 SF 271 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 4/258 (1%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL-YVAHADDIVVIERGRLHA 80 + F + H H + E+ + +G + + + A +++ G H Sbjct: 14 IYLFDPWTQSESHGEMH-HHDFLEISVLLEGESTYYFEKEPAKKIRAGSVMLFNPGVDHC 72 Query: 81 VASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK--EVIKTLFNELSVIL 138 + L +G + N H + + E L E S Sbjct: 73 ELQPKGTRSHQLHIGLKNISLEGFKRNFFPNKHPLLELGKYHHQVLEKAWQLVRESSEER 132 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 + + Q + L + Y L L ++ + ++ ++ ++YL N+Y+E+IT Sbjct: 133 DEFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYKEEIT 192 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 LE+L++ S +Y+ F + +SPINY+I+ R+ AK L N L+ E++ VGY+ Sbjct: 193 LEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASAVGYQ 252 Query: 259 NVDHFAKLFLRHVGCSPS 276 + HF+K F + G SPS Sbjct: 253 DAYHFSKSFKKLYGVSPS 270 >UniRef50_C2BII1 AraC family transcriptional regulator n=3 Tax=Anaerococcus RepID=C2BII1_9FIRM Length = 282 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 5/256 (1%) Query: 29 DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVN-D 87 +D K S H Y+ +G R TI++ +A D+++I H + D + Sbjct: 30 NDSKISSRIQFHPFTY-FYYLDEGFGRLTIENDNIEVNAGDLIIINSNVGHTLHLDKSIS 88 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 + G ++++ + + I + F ++ +S + Sbjct: 89 NVKYLGFGIESVSIAGLDDDE-SKSINYFHIDNRNKALRFEDYFEDIHREY-KSNDIFAR 146 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 SL +A A TL I ++ + + K + I I Y+++NY E I LE LS Sbjct: 147 SLANATATTLVINLLRKYRKDI-TIKRDKKVNRQIDYIKSYIDSNYSEDIKLEDLSAMAY 205 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + ++ EF + YRI+PI Y+I +R+ AK L +T S EIS VG+ + +F ++F Sbjct: 206 MNKFHLISEFKQSYRITPIEYLILKRIEIAKSLLISTNHSMEEISAMVGFNSQSYFNQVF 265 Query: 268 LRHVGCSPSDYRRQFK 283 + G +PS +RR+ + Sbjct: 266 KKKAGQTPSQFRRKHR 281 >UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB33_LEPBD Length = 283 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 15/268 (5%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G L Y+K G F + A + IE + +D +P Sbjct: 27 PLHKYGPTTRSGYM-LHYIKSGKGTFYSRGKTFHLKAGEFFFIEPEEIIWYEADEYEPWA 85 Query: 91 TCTCALYGFQFQGAEENQLLQ----PHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 Y F+G ++ L+ + P+ +A +G ++I+ E+ I S+++ Sbjct: 86 Y-----YWIGFRGNMVSEYLRRTSVNKNKPIFSAQKGGDIIRDKIVEIFEISVISEDN-- 138 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 L +A + E F Y + K+ ++ L + NN+ + + +++K Sbjct: 139 DLLLNARLLEILYYLSECFPLTYAKKDS---KNTILAKALQIMRNNFDTSVHISEIAKAL 195 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 +Y+ F ++ +I+P +Y+ R+ +AK LT T+ I+ VG E+ +F+KL Sbjct: 196 YIDRTYLHRIFKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSKL 255 Query: 267 FLRHVGCSPSDYRRQFKNCFAEQEILSE 294 F SP +YR+ +KN F Q E Sbjct: 256 FKNKENISPINYRKSYKNSFENQNKKIE 283 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 20/259 (7%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 N L V GV ++ Y + ++ +D+ +P + + G Sbjct: 57 RNLYLLHVVYSGVGTLFVNGEYYHLSKGNAFLLYPHVEAWYEADLTEPWSYFWIGVRGVD 116 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL-WDAFAYTLAI 159 PV Q + L ++ IL + + L A+ + Sbjct: 117 ADSFFTEVGFSKEK-PVGIVHQ----MDNLLLYINKILQKQDYTIEEQLSRSAYMHLF-- 169 Query: 160 LYYENFKNAYRSEQGYIKKDVLIKD-------ILFYLNNNYREKITLEQLSKKFRASVSY 212 F N R +Q +KD + YL+ +Y E I++ L+K+ ++ Sbjct: 170 -----FANLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISISALAKEMGIHRAH 224 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + + F K+ SP Y++ RM AK L T S AEI++ VGY + F+K+F + +G Sbjct: 225 LFNSFKKDTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDPLSFSKIFRQKIG 284 Query: 273 CSPSDYRRQFKNCFAEQEI 291 SP YR + +E Sbjct: 285 VSPLQYRNMKEEMLYNRET 303 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 6/254 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 HVH+ EL Y+ G + I+ S+Y A +++I LH +S Sbjct: 29 PHVHEG-YELYYLLSGERTYFINQSVYTAEKGTMIIINPHDLHRTSSTEVQEFERILINF 87 Query: 97 YGFQFQGAEENQLLQPHSCP-----VIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 + + + P + + + + ++ + E+ K + Sbjct: 88 SHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQAAVEHMLMEMKKECKLKKEGHEDVVRA 147 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 L +Y + D I +I Y+N +++E +TL+ L+ +F S S Sbjct: 148 LLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISEIASYINCSFQETMTLDGLAGQFYISPS 207 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 Y+ F K Y+ R+ EAK L +T+ +I+ G++++ HF K+F V Sbjct: 208 YLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDTDEKILDIAADTGFKHISHFNKVFKEIV 267 Query: 272 GCSPSDYRRQFKNC 285 G P YR++ ++ Sbjct: 268 GIPPLQYRKKSRDI 281 >UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969580 Length = 304 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 7/251 (2%) Query: 42 NETELIYVKKGVARF-TIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 NE +LIY+ G F +++ H+ ++++ G H+ D G Sbjct: 57 NEYQLIYILDGKGTFVSMNKKKMQIHSGHMILLFPGEWHSYKPDKETGWYEYWIGFNGQD 116 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + E + + P+ G + VI+ L+ + + + + L L Sbjct: 117 IEKLVEVDFFRKDN-PIFNIGLNENVIQ-LYKQAANVAQEQTTGFQQILAGIVHLLLGYT 174 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 Y E+ +N++ + + I + NY+ +IT + ++ K S S F + Sbjct: 175 YSEHKQNSFINMNVLDQ----INTAKHLIAENYKTEITPKDIATKINMSYSCFRKVFKQY 230 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 SP Y + R+ +K L NT ++ EI++ VG++ +F LF + G SP +YR Sbjct: 231 TGFSPSRYKEELRLQTSKELLANTTMTSQEIAFEVGFDTPYYFCILFKKRTGYSPLEYRN 290 Query: 281 QFKNCFAEQEI 291 + + ++ Sbjct: 291 LAQGKYISNDL 301 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 173 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 54/295 (18%), Positives = 115/295 (38%), Gaps = 16/295 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFT 57 M + D + + L G ++ ++SG H H E E+ V G + Sbjct: 1 MAEIITDGSQKELKKHGSDEFPLLVSYEKLSGYKSGSFLWHWHP-EIEITLVLDGQILYK 59 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 ++ Y A DI++ LHA + + G+ + L + + P Sbjct: 60 VNQCTYHMKAGDILLGNANVLHAGFMEDMKDGKYVSITFLPKIIYGSYGSILRRKYVEPF 119 Query: 118 IAAGQGK-----------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 + EV E+ + + K + + + Sbjct: 120 LHNFSLPAVYIDYSQPWHEVFSEYVREIITLYEEKKEFYELDITGTLQKLWRCMLQNLPE 179 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 N +E ++++ +++I+ YL NY KI ++ ++++ S F + +S Sbjct: 180 NLPYTEHSKLERN-RMREIMDYLEYNYMNKIQMKDIAEEIHLCESECSRLFKRYMNVSLF 238 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 ++ + R+ + L +++ S E++ + G+ + +++AK+F R GCSP YR+Q Sbjct: 239 TFLQEYRVERSLEFLLSSDDSIMEVAQKSGFTDSNYYAKIFSRVKGCSPQKYRKQ 293 >UniRef50_B7C800 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C800_9FIRM Length = 295 Score = 173 bits (439), Expect = 6e-42, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 26 AFSDDP--KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS 83 +SD P H H++ + + KG + ++ Y + + I +G LH +++ Sbjct: 25 KYSDLPIGSGFKSLHWHED-LQFVLCTKGYVNYQVNGIEYKLKEKEALFINKGALH-MSN 82 Query: 84 DVNDPATTCTCAL----YGFQFQGAEENQLLQPHS----CPVIAAGQGKEVIKTLFNELS 135 D+++ T F + + + + P++ + E+I L++ + Sbjct: 83 DMSEDGEYVTLTFPEELLFFFKESRMKYKYVWPYTRMDFLRCYEIKEENEIISYLYD-IY 141 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 I + + L K + + +++ ++ +L Y++ +Y + Sbjct: 142 NIYLNGSDMFEYDVSILITMIWRDLVKSLSKIDFIPNKKDVERQERVQVMLVYIHTHYAD 201 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 +++L+ ++ S++ F K ++P Y+IQ R+ +A L + L+ EIS V Sbjct: 202 ELSLKDIADAGMMSIAQCNRCFNKMLNVTPYEYLIQYRLQKATNLLKDATLNVTEISEIV 261 Query: 256 GYENVDHFAKLFLRHVGCSPSDYR 279 G+ NV HF + F + G SP YR Sbjct: 262 GFNNVTHFIQAFKKVYGISPKKYR 285 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 52/254 (20%), Positives = 100/254 (39%), Gaps = 17/254 (6%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDP------ATT 91 H HD E+ YV++G ++ L D+ VI G H D Sbjct: 34 HTHD-FIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTSHVFRPSSQDNQLVIYNCIF 92 Query: 92 CTCALYGFQFQGAEENQL--LQPHSCPV---IAAGQGKEVIKTLFNELSVILPQSKNSQT 146 TC L + E +L L S P + + ++ + + + Sbjct: 93 RTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKFLSIMHGMFREYLKKGPRYE 152 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + LA+L + S + D + Y+N+++ +T++Q++++ Sbjct: 153 FLMMGQLIQVLAMLQRYECDGSMVSTPTNN-----MDDAIQYINDHFATNLTVQQVAERS 207 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S S+ F K ++ + ++ R+ L +TE+S E + +VGY+++ F L Sbjct: 208 FMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEISIQEAANQVGYQDMKFFHSL 267 Query: 267 FLRHVGCSPSDYRR 280 F + G +P +YRR Sbjct: 268 FRKKTGVTPREYRR 281 >UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus RepID=MSMR_STRMU Length = 278 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 13/280 (4%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 FD + L V D + G + DN + ++ +G + TI+ Sbjct: 10 FDINNFDLSVDHYGSEKC------DRGYSFGPTIRDNYV-IHFILEGKGKLTINQHTLDL 62 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG-AEENQLLQPHSCPVIAAGQGK 124 A DI ++ + +D+ P + G + + +++ L + C + + Sbjct: 63 AAGDIFLLPKDISTFYQADLQMPWSYIWIGFSGSKAENILKQSSLFKRFYCHSGRSSKLF 122 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 + T+ + L S L Y L E F ++ E K + Sbjct: 123 SQMMTIIQFANTPLT----SVNELLMVGELYKLLAALIEEFPLSHLEESNSSTK-AYVNQ 177 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 + +++ Y + + ++KK S SY+ F K +S Y++Q RM +++ L N Sbjct: 178 VKKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLSIKEYILQVRMKRSQYLLENP 237 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 +LS AEIS VG+ + F+K F + G SPS +R++ +N Sbjct: 238 KLSIAEISNSVGFSDSLAFSKAFKNYFGKSPSKFRKEIQN 277 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 4/249 (1%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H EL Y+ G + +D +++ D++++ LH+ AS Sbjct: 32 PHEHP-YFELYYLLNGERVYFMDDNVFTVKKGDLMIVNPHDLHSTASSEKLLFERVLIGF 90 Query: 97 Y--GFQFQGAEENQLLQPHSCPVIAAG-QGKEVIKTLFNELSVILPQSKNSQTSSLWDAF 153 + A LL + +I + + I+ L + + + +S + Sbjct: 91 SRTFIEQGDAGVANLLDHGTSRLIRIPLKHQPEIERLLHSMLAECQTEQTHYSSLVRSLM 150 Query: 154 AYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYI 213 L L+ ++ + I +I Y+ +N+ EK+TLEQ++K+F S SY+ Sbjct: 151 NELLIRLHRIETTLQSQTHEYEHPMHQKISEIAQYIKSNFHEKLTLEQVAKQFYISPSYL 210 Query: 214 CHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGC 273 FT+ YV R+ EA+ L ++ S IS G+E++ HF K F + G Sbjct: 211 SRVFTRLTGFHFREYVQVVRIREAQKMLVSSRDSVQIISELAGFEHIAHFNKTFKKIAGT 270 Query: 274 SPSDYRRQF 282 +P YR++ Sbjct: 271 TPLQYRKRH 279 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 173 bits (439), Expect = 7e-42, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 100/265 (37%), Gaps = 9/265 (3%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +SR S + + H H + E Y+ G + I+ +LY DI+ ++ G +H Sbjct: 5 ISRTKRSYEFHM-AESHWHTH-YEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRT 62 Query: 82 ASDVNDPATTCTCALYGFQFQGA-----EENQLLQPHSCPVIAAGQGKEVIKTLFNELSV 136 + T + G EEN + V + ++ L + Sbjct: 63 TYHSSPVNERVTISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEY 122 Query: 137 ILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREK 196 ++ + + Y L + + A + I+ Y+ ++Y+ Sbjct: 123 E-ETGQDGFSPLMKKGCFYELLVSLSR-CQEAETDHGRLEIGEETIEAAAKYIYDHYQNP 180 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 ITLE++++ S +Y +F Y+ R+ EA L ++ S EI+ R G Sbjct: 181 ITLEEVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCG 240 Query: 257 YENVDHFAKLFLRHVGCSPSDYRRQ 281 + + ++F F + G SP +R+ Sbjct: 241 FGDGNYFGDAFRKAKGVSPRAFRKM 265 >UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36461 Length = 276 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 11/252 (4%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 + +V KG + Y + +I G + +D +P + A G + Sbjct: 27 IHFVLKGKGIYRTGYGQYEIKEGEAFLIRPGEVTYYQADFEEPWSYAWIAFDGDGAEALL 86 Query: 106 ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENF 165 E + HS PV A G+ V L +N + + F +A L Sbjct: 87 E-RYYPDHSFPVCAMGEITAVSGWFEGLLGAFGSAEENRE--RVLGYFYLIMACLLRSGK 143 Query: 166 KNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISP 225 E+GY K + ++ +NY I + +++ +Y+ F + +SP Sbjct: 144 GGVPVDEEGYFK------RAVAFIRHNYSYPIQISEIAGYVGIDRTYLYRIFMHQAGVSP 197 Query: 226 INYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR--RQFK 283 Y+ + R+ EAK L TE EI++ GY + F + F + G +P+ YR ++ K Sbjct: 198 KQYLSRYRLEEAKEMLVQTEYRITEIAYSCGYHDSSSFCRHFQKATGNAPARYRSMKKIK 257 Query: 284 NCFAEQEILSEF 295 +E + + Sbjct: 258 PGRESEEKIIDN 269 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 13/264 (4%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 S ++ H H E E++ V +G ++ A+ IV+I LH Sbjct: 32 SVWREFFFVPHWH-KEIEILCVHQGQLELVVNGFSRKIKANTIVLIPPNTLHTAYRIAQQ 90 Query: 88 PATTCTCALYGFQFQGAEENQ---------LLQPHSCPVIAAGQGKEVIKTLFNELSVIL 138 + ++ L+Q + + TLF Sbjct: 91 SCRFSCIVFSEQLITSRQSDRIQSQQIDPFLIQEGVTSYVDFPDKSQQSLTLFQLFDQCF 150 Query: 139 PQSKNSQTSSLWDAFAYTLAILY-YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKI 197 + + L L+ L + A +S + +K I +L Y+++NY E I Sbjct: 151 MGKSSYRELRLKGIVIQLLSHLLEVGTDQPAKKSSERLQEKREKI--VLSYIHSNYHEMI 208 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 L+ L+ S F + +R SP+ Y+ R+ + L T+L+ I+ VG+ Sbjct: 209 QLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNHYRLIRSAELLRETDLTMVAIAQAVGF 268 Query: 258 ENVDHFAKLFLRHVGCSPSDYRRQ 281 N +HF+ F + G +P+ YR+ Sbjct: 269 CNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 15/260 (5%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA--VASDVNDPATT 91 E+ H HD EL YV G + +L A D+ +I LH + D D Sbjct: 30 EAKLHRHDA-WELYYVVHGYGKRMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDGY 88 Query: 92 CTCALYGFQFQ--------GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 + F E L + P A G +T+ LS + + Sbjct: 89 VRYLMVAFSHSLVERCMAVFPELRNRLTGITFPTNALKFGTGSSQTIRRILSQMNDMDEL 148 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + ++ L ++ + + ++ I Y+ +Y I+L+ ++ Sbjct: 149 GRLCEMF----RLLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIA 204 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + + S C F + ++ YV Q R+ A L +++ +EI + VG+ ++ HF Sbjct: 205 AEVGMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHF 264 Query: 264 AKLFLRHVGCSPSDYRRQFK 283 ++F +G SPS YRR+F+ Sbjct: 265 VRVFKNTLGMSPSKYRRRFQ 284 >UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8 Length = 295 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 108/264 (40%), Gaps = 10/264 (3%) Query: 20 PRLSRFAFSDDP-KWESGHHVHD--NETELIYVKKGVARFTIDS-SLYVAHADDIVVIER 75 P + S P K+ NE +L+Y+ KG F+ S +A ++++ Sbjct: 34 PPGCAYPLSRHPEKYNFKPQTGRILNEYQLVYITKGSGYFSSQSCKSQKINAGTMILLFP 93 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS 135 G H+ D G E + P+ G ++ L+ ++ Sbjct: 94 GEWHSYYPDRETGWDEYWVGFRGIHIDKRVEKKFFTKEE-PLHRIGLSATIVG-LYEDIL 151 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 + K+ + + L +YY+ N++ + K I + + N + Sbjct: 152 KFASEEKSGYQQMISSIVLHILGSVYYKEKNNSFTNTYVVDK----INEARILMKENIED 207 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 ++ E+++ + S+ F + +SP Y +Q+++ AK LT+T L+ +EI++ + Sbjct: 208 PLSPEEIAARLGLGYSWFRRMFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEIAYSL 267 Query: 256 GYENVDHFAKLFLRHVGCSPSDYR 279 +EN F+ F + G +PS++R Sbjct: 268 HFENAGQFSTFFKKKEGVTPSEFR 291 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 172 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 116/291 (39%), Gaps = 22/291 (7%) Query: 15 VAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 + R + F + H H E E+ + +G + ++ Y A A ++++++ Sbjct: 25 MVEHMVRPANFDMRYN-------HFH-QEYEIYLLLRGRRQMFFENRAYEAQAGNLILVD 76 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQ----------FQGAEENQLLQPHSCPVIAAGQGK 124 G++H S V DP T + F + H + Sbjct: 77 SGQIHMSHSIVGDPETEYERVILYVDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQT 136 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN----FKNAYRSEQGYIKKDV 180 + LF ++ L +++ +++ N N + + K Sbjct: 137 ANTRRLFLQIMEELDKAEPMSQTAILSELILGFIYFRRSNQQVACLNDVQEGKASGGKFD 196 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 + I Y++++++E+++L+ L+++F S Y+ F + Y+ R+ +A+ Sbjct: 197 AVYQISDYISDHFQERLSLDSLAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSL 256 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEI 291 L T LS +EI+ R G+E++ + ++F ++ +P+ YR+ + + Sbjct: 257 LETTTLSVSEIASRTGFESITYLGRVFKKYQHVTPAQYRKSLTSTAEKNNT 307 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 13/257 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H NE ELI V G I++ Y DI++I G LH ++ N+ +T + Sbjct: 36 HWH-NEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESSTWNSIVFN 94 Query: 98 GFQFQGAEENQLLQPHSCPVIA-----------AGQGKEVIKTLFNELSVILPQSKNSQT 146 Q + P+I +K + + Sbjct: 95 MDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGFE 154 Query: 147 SSLWDAFAYTLAILY-YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 + ++L+ + K + +K IK +L Y+ NY ++I + +LS Sbjct: 155 LEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEIDINRLSAI 214 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 + S+ F K + I ++ R+ +A ++NT+LS EIS VG+ N+ +F + Sbjct: 215 CHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISYFIR 274 Query: 266 LFLRHVGCSPSDYRRQF 282 F +P ++ + Sbjct: 275 SFKEKYNTTPKGFKTRL 291 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 104/292 (35%), Gaps = 20/292 (6%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSLY 63 D + L F + G H H E EL+ V +G I + Sbjct: 9 DKEGKELRQPLDGKFPIAAEFQKLSYYAYGLCISHWHP-EMELLVVTEGALEQRIGEETH 67 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSC-------- 115 + ++ V I +H + + G ++ + + + Sbjct: 68 MIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKYVKTLQSQKDL 127 Query: 116 ---PVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSE 172 V + + L +++ + + + +LY + + E Sbjct: 128 LYRIVRPEDIQQRRMIDLIYKITDTYVKREVCYELKVQQMMLELWELLYK---RTGHVEE 184 Query: 173 QGYIKKDVL--IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 L I+D L Y+ Y+ +TLE ++ S S C F K +R SP+ YV Sbjct: 185 NAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACMLSKSSCCRLFKKVFRQSPMEYVT 244 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 R+ ++ + + S EI++ G+ N +F ++F + +G +P+ Y+++ Sbjct: 245 SYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFRKVIGMTPTQYKKEI 296 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 92/273 (33%), Gaps = 18/273 (6%) Query: 20 PRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 P + + ++ G H H+ E+ YV +G I + I G+ H Sbjct: 18 PGVPLYVNRAYESFDMGEHSHE-FVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSH 76 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQL-------------LQPHSCPVIAAGQGKEV 126 P +Y + ++L + Sbjct: 77 VFR--PKTPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGE 134 Query: 127 IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDIL 186 +F EL + + L L LY + + G + + + + + Sbjct: 135 YHAMFRELYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQII--APAGDRPQWLSVDEAI 192 Query: 187 FYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTEL 246 +++ NY ++ L +L+ + + S F + +S I YV RM A LT Sbjct: 193 AFIDRNYASELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHS 252 Query: 247 SQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 S +I+ VGY ++ F +LF + G +P YR Sbjct: 253 SVEDIAGAVGYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_A9KHI4 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHI4_CLOPH Length = 259 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 115/259 (44%), Gaps = 11/259 (4%) Query: 24 RFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS 83 F H+H E E++ +KGV T + + DI++ +H+ + Sbjct: 11 TFNLYQGTNMTFPPHLH-KEIEILICQKGVVEATCNGQTLLLEESDIMIALPNTIHSYET 69 Query: 84 DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 + C L + + + P + Q K++ + ++L + +N Sbjct: 70 --KEYCEYILCILSPSTLP-LFKPYFQKEFTTPFLQMDQTKKITPFV----RMLLEEWEN 122 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + L ++ L++++ KN +E+ + ++ IL Y++ +Y E+ +LE L+ Sbjct: 123 DRNQELMISY---LSVIFSLILKNTTFTEKATSTYEDILPSILLYVDEHYLEQFSLEDLA 179 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + SY+ F++ + +YV++ R+ AK L NTE S EI++ G+ F Sbjct: 180 SHLGFNPSYVSRLFSERVHCTLTHYVMELRVNYAKHLLQNTEKSITEIAYECGFATQRSF 239 Query: 264 AKLFLRHVGCSPSDYRRQF 282 ++FL+ V +P +YR+ + Sbjct: 240 NRVFLQLVNTTPREYRKTY 258 >UniRef50_B8I9A5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I9A5_CLOCE Length = 289 Score = 172 bits (436), Expect = 1e-41, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 11/262 (4%) Query: 25 FAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD 84 F + H H N E+++ +KG I+ S ++ + +++I G LH++ Sbjct: 21 FNCFYIKNSNTLPHWH-NHFEMVFSQKGSCMVYINGSSFLVSENQLIIIPPGSLHSIFPQ 79 Query: 85 VNDPATTCTCALYGFQ--FQGAEENQLLQPH----SCPVIAAGQGKEVIKTLF---NELS 135 + F+ +++L P P + + V K F +EL Sbjct: 80 GSCSYCAIVAGESLFEGLVADPHISEVLTPFMSIGFYPPLHLSEKDRVFKKCFLLVHELQ 139 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 Q +N + + ++L E+ + + + LIK L YL +Y E Sbjct: 140 RENDQKRNGYGARIKSQMIILFSVL-QESLPSEFFKKNKLPDSTRLIKYSLDYLRIHYSE 198 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 +IT+ +S S+ + F + + Y+ R+ +A+ L T++ +I V Sbjct: 199 RITVNDMSVYCHLSIQHFSRLFKACTGKTFVEYLTLFRLEKARKILIGTDIPITQIPDLV 258 Query: 256 GYENVDHFAKLFLRHVGCSPSD 277 G+ N ++F +L+ ++ G PS Sbjct: 259 GFCNSNYFCRLYKKYYGHPPSK 280 >UniRef50_D2MNX8 Transcriptional regulator, AraC family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNX8_9FIRM Length = 282 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 106/259 (40%), Gaps = 16/259 (6%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H + E I + +G + + ++AH D+ +I R R+H + + + Sbjct: 25 HWHHS-FEFIEILEGEYQCHVSGKTFLAHPGDLCIINRSRIHRILNQKKERCRKKVLIFD 83 Query: 98 GFQFQGAEENQLLQPHSCPV------------IAAGQGKEVIKTLFNELSVILPQSKNSQ 145 F E + Q + P+ +G G E+I L +E+ + + Sbjct: 84 PDYFIHNPE--IYQKYVKPLQEETAFSHMQLKFKSGMGAELIH-LIDEIDRLNSEKPVGY 140 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 L LY + + ++ Y + + + Y+ +Y E +TLE++++ Sbjct: 141 EMETIGLIYLLLRRLYLAHHQQEKLLQENYDLNSTIQRKMTLYIYEHYAEHLTLEKIAQA 200 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S S F + SPI+++ + R+ + L N+ S +I++ G+ +F + Sbjct: 201 GLVSKSTCIRLFKEYTGKSPIDFLNRYRLEVSSQLLKNSHRSITDIAFECGFSQASYFNR 260 Query: 266 LFLRHVGCSPSDYRRQFKN 284 F + G SP+ YR+Q + Sbjct: 261 QFKKEYGSSPNQYRQQKNH 279 >UniRef50_UPI0001C368B4 two-component response regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C368B4 Length = 289 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 92/238 (38%), Gaps = 5/238 (2%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + +L+Y+ G A F ++ + A ++V+ G + D G++ Sbjct: 48 DYQLLYIASGKAEFVLNGAAVTIPAGNMVLYGPGEYQQYTYLLEDRPEVFWVHFTGYEAA 107 Query: 103 GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY 162 L ++ G + LF + L Q + + L + Sbjct: 108 DLLSRTGLSLEDFRILRTG-CASRYQDLFLSMIREL-QLPRPLSGDFSSLYFKELLLTVE 165 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 +++ K+ ++ + + + N+ I + + S + F + Sbjct: 166 RQIAEGGKNKPQIQKE---MEHAVHFFHENFSADIDISDYAASLHMSTCWFIRSFKQYVG 222 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + P+ Y+ R+ +AK L +T+ +EI +GYEN +F+++F + G SP+ YR+ Sbjct: 223 VPPLQYLTSIRINKAKELLESTDCPVSEIGSIIGYENPLYFSRIFKKQTGLSPAAYRK 280 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 117/286 (40%), Gaps = 17/286 (5%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 D++ L G + F D K + H HD E E+I + +G I +S +V + Sbjct: 11 DSSGRELLTYGTSDFPIAFFDDDLTKVKVPWHWHD-ELEIIIITEGSVSVQIANSSFVLN 69 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG--- 123 + + G LH+ + + P ++ + E+ + + + P+ Sbjct: 70 KGEGYFLNSGILHS--AKLLSPKGHQRALIFSPEIAAHNEDIVWKTYIKPIFKKQALPFI 127 Query: 124 --------KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN--FKNAYRSEQ 173 + I L N++ + K ++ +++ +N Sbjct: 128 KLSPGISWQNSILRLSNDVWLTGAYEKTDYPITVRHNLTKVFSLIKSNIDLIENETEFTH 187 Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 + ++ IK ILF++ NNY IT+ ++K S+S F + + +PI Y+I+ R Sbjct: 188 KTKQDELRIKKILFFIENNYSTTITIADIAKSGDISISSCLRLFKQILKTTPIQYLIKYR 247 Query: 234 MTEAKWSLTN-TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + +A + S +I++ G+ + +F + F + GC+P++Y Sbjct: 248 LQKAVEEFDSLEGRSIGDIAYSCGFSDATYFNRCFKKEFGCTPTEY 293 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 171 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 2/257 (0%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 +D + S H HD+ E+IYV G + + Y ++ VI ++H S Sbjct: 22 YEDYRQFSPRHWHDH-IEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIHGTQSYERV 80 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 + Q+ + E +K+L ++ I + Sbjct: 81 RVLLVQIPYAYLDSYIDDYGQIRFRECYETENGSRKYEQMKSLLKSIAHIYRKKGKGYEL 140 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 L A + + N+ + ++ +KD+L Y+ NY+E I L++ + Sbjct: 141 RLM-AKVNEFLYILFTNYSYKEMNAGKESRQIARLKDVLRYVAKNYQEPIALKEAADIAS 199 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + Y C F K ++ + YV Q R+ L TE S +I G+ N F+++F Sbjct: 200 LNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDILEHNGFTNYKVFSRMF 259 Query: 268 LRHVGCSPSDYRRQFKN 284 G +P + R+ +N Sbjct: 260 KAQFGMTPRELRKLQEN 276 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77402 Uncharacterized HTH-type transcriptional regulat... 319 6e-86 UniRef50_B4TGJ3 Transcriptional regulator, AraC family protein n... 272 8e-72 UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protei... 239 9e-62 UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostri... 236 7e-61 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 233 4e-60 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 233 8e-60 UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteri... 232 1e-59 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 231 2e-59 UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Rum... 230 4e-59 UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobac... 229 1e-58 UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=B... 228 2e-58 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 226 6e-58 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 226 6e-58 UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaeros... 225 1e-57 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 224 2e-57 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 223 8e-57 UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostri... 222 1e-56 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 222 1e-56 UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminoc... 221 2e-56 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 220 5e-56 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 219 6e-56 UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostri... 219 6e-56 UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Ac... 219 1e-55 UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecali... 218 1e-55 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 218 2e-55 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 218 2e-55 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 218 2e-55 UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=A... 218 2e-55 UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n... 218 3e-55 UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecali... 217 3e-55 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 217 3e-55 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 217 4e-55 UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=P... 217 4e-55 UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostri... 217 4e-55 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 217 5e-55 UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumil... 216 7e-55 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 216 9e-55 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 216 1e-54 UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 ... 215 1e-54 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 214 2e-54 UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=C... 214 2e-54 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 214 2e-54 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 214 2e-54 UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=... 214 2e-54 UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=B... 214 3e-54 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 214 4e-54 UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=C... 214 4e-54 UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=C... 214 4e-54 UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC... 213 7e-54 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 213 7e-54 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 213 9e-54 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 212 1e-53 UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID... 212 1e-53 UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC... 212 2e-53 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 212 2e-53 UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing... 212 2e-53 UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=A... 211 2e-53 UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=C... 211 2e-53 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 211 2e-53 UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=P... 211 2e-53 UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID... 211 3e-53 UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus s... 211 3e-53 UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Ba... 211 3e-53 UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1... 211 3e-53 UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminoc... 210 4e-53 UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminoc... 210 5e-53 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 210 6e-53 UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostri... 209 7e-53 UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaeros... 209 8e-53 UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminoc... 209 8e-53 UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1... 209 8e-53 UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=B... 209 8e-53 UniRef50_B0MDV1 Putative uncharacterized protein n=1 Tax=Anaeros... 209 1e-52 UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Gr... 209 1e-52 UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=C... 209 1e-52 UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus s... 209 1e-52 UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=B... 209 1e-52 UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS fami... 209 1e-52 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 209 1e-52 UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=... 208 3e-52 UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 T... 208 3e-52 UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminoc... 208 3e-52 UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protei... 207 3e-52 UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostri... 207 3e-52 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 207 3e-52 UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostri... 207 3e-52 UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridiu... 207 4e-52 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 207 4e-52 UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Strepto... 207 4e-52 UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n... 207 5e-52 UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=L... 207 5e-52 UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=C... 207 5e-52 UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=R... 207 5e-52 UniRef50_B1QZ26 Putative transcription regulator, AraC family n=... 207 5e-52 UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminoc... 206 6e-52 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 206 6e-52 UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostri... 206 7e-52 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 206 7e-52 UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=P... 206 8e-52 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 206 8e-52 UniRef50_P96660 Uncharacterized HTH-type transcriptional regulat... 206 1e-51 UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostri... 205 2e-51 UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=H... 205 2e-51 UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1... 205 2e-51 UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 T... 204 2e-51 UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnos... 204 2e-51 UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia... 204 2e-51 UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus ... 204 3e-51 UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bactero... 204 3e-51 UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales ... 204 3e-51 UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=M... 204 3e-51 UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=P... 204 3e-51 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 204 3e-51 UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobac... 204 4e-51 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 204 4e-51 UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=P... 204 4e-51 UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium va... 204 4e-51 UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing... 204 4e-51 UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bactero... 204 4e-51 UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing... 203 5e-51 UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminoc... 203 6e-51 UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Cl... 203 6e-51 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 203 6e-51 UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=P... 203 6e-51 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 203 8e-51 UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=... 203 8e-51 UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=C... 203 8e-51 UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostri... 203 8e-51 UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enteroc... 203 9e-51 UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coproco... 203 9e-51 UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=C... 203 9e-51 UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminoc... 203 9e-51 UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing... 202 1e-50 UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotro... 202 1e-50 UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC... 202 1e-50 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 202 2e-50 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 201 2e-50 UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnos... 201 2e-50 UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA met... 201 2e-50 UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=L... 201 2e-50 UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminoc... 201 2e-50 UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacil... 201 3e-50 UniRef50_C9KIY1 Transcriptional regulator, AraC family n=1 Tax=M... 201 3e-50 UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostri... 201 4e-50 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 200 4e-50 UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein,... 200 4e-50 UniRef50_B0MHX9 Putative uncharacterized protein n=1 Tax=Anaeros... 200 5e-50 UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostri... 200 6e-50 UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=... 200 6e-50 UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=C... 199 7e-50 UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Or... 199 7e-50 UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 ... 199 7e-50 UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=C... 199 9e-50 UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipe... 199 9e-50 UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=C... 199 9e-50 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 199 1e-49 UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Diali... 199 1e-49 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 199 1e-49 UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp... 199 1e-49 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 199 1e-49 UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Ba... 199 1e-49 UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=C... 198 1e-49 UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=C... 198 2e-49 UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostri... 198 2e-49 UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/Xyl... 198 2e-49 UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=P... 198 2e-49 UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostri... 198 2e-49 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 198 3e-49 UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostri... 198 3e-49 UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=S... 198 3e-49 UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=R... 198 3e-49 UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 T... 198 3e-49 UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=... 197 3e-49 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 197 4e-49 UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C... 197 4e-49 UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=C... 197 4e-49 UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus s... 197 4e-49 UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=P... 197 5e-49 UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 T... 197 5e-49 UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacte... 197 5e-49 UniRef50_UPI00019737F8 L-rhamnose operon transcriptional activat... 197 5e-49 UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostri... 196 6e-49 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 196 6e-49 UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerot... 196 8e-49 UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=C... 196 8e-49 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 196 9e-49 UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1... 196 1e-48 UniRef50_C6LM61 Putative raffinose operon transcriptional regula... 196 1e-48 UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=C... 196 1e-48 UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=B... 196 1e-48 UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC... 196 1e-48 UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bactero... 196 1e-48 UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=B... 195 1e-48 UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bactero... 195 1e-48 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 195 1e-48 UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=... 195 1e-48 UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr... 195 2e-48 UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=B... 195 2e-48 UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=P... 195 2e-48 UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=C... 195 2e-48 UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostri... 195 2e-48 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 194 2e-48 UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=... 194 2e-48 UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=C... 194 2e-48 UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC... 194 2e-48 UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Cl... 194 2e-48 UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_L... 194 3e-48 UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=B... 194 3e-48 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 194 3e-48 UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=... 194 3e-48 UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 T... 194 4e-48 UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea l... 194 4e-48 UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=P... 194 4e-48 UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus g... 193 5e-48 UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bactero... 193 6e-48 UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus s... 193 6e-48 UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=C... 193 8e-48 UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecali... 193 9e-48 UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=M... 193 9e-48 UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococ... 193 1e-47 UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=P... 193 1e-47 UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=C... 193 1e-47 UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales... 192 1e-47 UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr... 192 1e-47 UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=C... 192 1e-47 UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blaut... 192 1e-47 UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=P... 192 1e-47 UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=P... 192 2e-47 UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coproco... 192 2e-47 UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Cl... 191 2e-47 UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1... 191 2e-47 UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales ... 191 2e-47 UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Ta... 191 2e-47 UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales ... 191 2e-47 UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral... 191 2e-47 UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=A... 191 2e-47 UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostri... 191 2e-47 UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium re... 191 2e-47 UniRef50_C4Z7H0 AraC family transcriptional regulator, L-rhamnos... 191 2e-47 UniRef50_UPI000178921D transcriptional regulator, AraC family n=... 191 3e-47 UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=b... 191 3e-47 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 191 3e-47 UniRef50_UPI0001788616 transcriptional regulator, AraC family n=... 191 3e-47 UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=P... 191 3e-47 UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=L... 191 3e-47 UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=C... 191 4e-47 UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacte... 191 4e-47 UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaeros... 191 4e-47 Sequences not found previously or not previously below threshold: UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostri... 205 2e-51 >UniRef50_P77402 Uncharacterized HTH-type transcriptional regulator ydiP n=52 Tax=Enterobacteriaceae RepID=YDIP_ECOLI Length = 303 Score = 319 bits (819), Expect = 6e-86, Method: Composition-based stats. Identities = 303/303 (100%), Positives = 303/303 (100%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS Sbjct: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA Sbjct: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV Sbjct: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS Sbjct: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS 300 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS Sbjct: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS 300 Query: 301 LVG 303 LVG Sbjct: 301 LVG 303 >UniRef50_B4TGJ3 Transcriptional regulator, AraC family protein n=28 Tax=Enterobacteriaceae RepID=B4TGJ3_SALHS Length = 296 Score = 272 bits (697), Expect = 8e-72, Method: Composition-based stats. Identities = 233/289 (80%), Positives = 253/289 (87%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MYQRCFD+A+ET+F KTPR SRF SDDP WESGHH+HDNETELIYVKKG+AR IDS Sbjct: 1 MYQRCFDSAAETIFEQDKTPRFSRFVISDDPNWESGHHMHDNETELIYVKKGIARLIIDS 60 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 SLYVAHADDIVV+ERGRLHAVASD N PATT TCALYGF F G EENQLLQ HSCPV++ Sbjct: 61 SLYVAHADDIVVVERGRLHAVASDSNSPATTYTCALYGFCFPGWEENQLLQSHSCPVVSV 120 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 QGKEVIK++FNELSV+LPQ KN SS++DAFAYTL LYYENFKNAYRSEQGYIKKDV Sbjct: 121 VQGKEVIKSIFNELSVLLPQGKNVLASSVYDAFAYTLTALYYENFKNAYRSEQGYIKKDV 180 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 LIKD+L YLNNNYREKITL+QLSKKFRASVSYICHEF KEY I PINYVIQRRMTEAK++ Sbjct: 181 LIKDVLVYLNNNYREKITLDQLSKKFRASVSYICHEFAKEYHIFPINYVIQRRMTEAKFA 240 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQ 289 LTNTE AEISWRVGYENVDHFAKLF+RHVGC P+DYR+QFKN Q Sbjct: 241 LTNTESPLAEISWRVGYENVDHFAKLFMRHVGCYPNDYRKQFKNSLVAQ 289 >UniRef50_UPI0001BC4191 helix-turn-helix domain-containing protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4191 Length = 306 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 19/302 (6%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTID 59 + D +E L V G FSD K+ +G H H E E+I + KG I+ Sbjct: 5 KILTDKNNEELAVHGNYEFPCAVYFSDVSKYTAGEIAWHWH-KEIEIITIYKGTLYIEIE 63 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 + + + + I +H + D + + G + +++ Q + P+I Sbjct: 64 NKKFTLKKGESLFINSEEMHFMRMDAREECRIISFVFDKVLICGEKGSKIDQKYIIPLIN 123 Query: 120 AGQ----------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAY 169 + +++I+ F+ IL + + + L + EN + Sbjct: 124 CKELSALELTEEDSQKLIQGYFSYADEIL-----GYEIVIRNVLSEILLNIVRENQELLE 178 Query: 170 RSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYV 229 +S +K +L +++ NY E I+L ++K+ F + SPI Y+ Sbjct: 179 KSNGSNNTDRERMKYMLTFIHKNYSEDISLGDIAKEAFIGEREALRCFARTIGTSPIEYL 238 Query: 230 IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQ 289 + R+ A L +EL EI + G+ + +F+K+F R +G +P +YR+ N + Sbjct: 239 QKYRIYTAAELLRKSELPVTEICLQAGFNSPSYFSKVFCRMLGMTPREYRKNKLNLDIKN 298 Query: 290 EI 291 +I Sbjct: 299 KI 300 >UniRef50_C0C2H5 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H5_9CLOT Length = 300 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 122/300 (40%), Gaps = 17/300 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFT 57 + + D L G + ++ G H H E E+ + +G + Sbjct: 2 IREIITDKNMLELNPHGNYGFPFYLIYVTLSAYQFGRFNCHWHP-ELEIACILEGTMTYQ 60 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 ++ +LY D + + LH+ N+ G E++ + ++ P+ Sbjct: 61 VNQNLYQLGKGDCLFVNSNALHSGCMFENNDCKYIVATFNPSLIYGYEKSDIDTNYTFPL 120 Query: 118 IAAGQ-----------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 + G E + + E++ + + A+L+ E + Sbjct: 121 LNTDNFTSFVFRDGADGNETFQKIMKEMAAFYTEENACYELHIKSRLCELWALLFEEFQR 180 Query: 167 NAYRSEQG--YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 + S G K+ +K+ + +++++Y + ITL+Q+++ S S C F K + Sbjct: 181 SQLPSGAGLAEAKQISRLKNAIIFIHSSYTDPITLDQMAESCHTSKSEFCRIFKKTLHQT 240 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 P Y+++ R+ ++ L S EI+ +VG+ +++++F +++GCSP +Y++ N Sbjct: 241 PFEYLLRYRIQKSLPLLVTDTCSITEIASQVGFSGSSYYSEVFRKYMGCSPREYKKNLMN 300 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 12/258 (4%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H HD E EL+ V +G A F +D Y A + + + G LH+ P + Sbjct: 35 LHWHD-ELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCSFDAVVF 93 Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKE-----------VIKTLFNELSVILPQSKNSQ 145 + F + L + PV+ + + +++ + + + Sbjct: 94 HSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHRNEQAAS 153 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 ++ LA L + + + +K ++ Y+ NY E I L++L++ Sbjct: 154 ELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPLQKLAEL 213 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 R S SY C F + SPI Y+ R+ +A L T+ E++ VG+ ++ +F Sbjct: 214 ARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNSLSYFNT 273 Query: 266 LFLRHVGCSPSDYRRQFK 283 +F + GC+P +YR + + Sbjct: 274 VFRQRFGCTPREYRSRLQ 291 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 108/282 (38%), Gaps = 11/282 (3%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 T+ + P + + H H E E+ YV +G F IDS A + Sbjct: 12 STVHGNERFPFGAYWYQFAPGAHVVDSHWH-KEAEIFYVMEGEVLFQIDSEYIPVRAGEA 70 Query: 71 VVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA---------AG 121 + I+ G LH + N+ + C + + + + P Sbjct: 71 IFIDGGDLHTGHAQGNEGCSFCAMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTS 130 Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLW-DAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 E + E+ ++ +++ F N RSE + + Sbjct: 131 GTDERLLEHIKEMMLLSKHKPAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMTRTE 190 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 +K ++ Y+ ++Y I L +L+ S C F +P++Y+ R+ +A Sbjct: 191 RLKKVILYIQSHYHRPIRLSELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAEL 250 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L + + ++I+ VG+ ++ +F ++F + + C+PS+YR++ Sbjct: 251 LRSPDNKISDIALDVGFGHISYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_A8SGH8 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A8SGH8_9FIRM Length = 288 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 8/284 (2%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M + FD L W S H H + TEL Y G +F + Sbjct: 1 MSTQRFDIRHAP-APRESFRLLYISKSRFGGDWNSTTHTH-SCTELFYCLSGEGQFYLAG 58 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 L+ DD+V++ H S P + +F ++ + + + Sbjct: 59 QLFPVKPDDMVIVNPQVEHTELSLNASPLEYIVLGVASMEFLFSKADT-----NYAIFNC 113 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 + +E + TL + L +S + + D L I + + E+ ++ Sbjct: 114 RENRERMVTLLHMLLAEADRSLDGCETVCQD-LLEVLLIWLVRCTTISLQLEEAAPTENR 172 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 +I YL+ NYRE I+L+ L++ + Y+ H F +EY ISPI Y+ +RR+ E+K Sbjct: 173 ECAEIKRYLDTNYREDISLDLLAELAHLNKYYLAHTFQREYGISPITYLNRRRIEESKHM 232 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 L NT S A+IS +G+ + +F++ F + G +P++YRRQ + Sbjct: 233 LGNTGYSLAQISELMGFSSPSYFSQCFRKAEGMTPNEYRRQTRQ 276 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 129/294 (43%), Gaps = 13/294 (4%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 +++ E + G + F + + H H++ E+I+V G + +++S+ Sbjct: 7 NVTVNSSGEEVQKHGTSEFPIAFYEENLSSYSIPWHWHEDF-EIIWVISGSIKVSVNSTE 65 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI---- 118 ++ + + + I G LH++ + + + + + G+ ++ Q + P+I Sbjct: 66 HILNKNQGIFINAGFLHSIHATNDGEYVLRSIVFHP-RLIGSIDSIYWQNYIEPIIQNKN 124 Query: 119 -------AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRS 171 ++ I + L ++N + + + + I+ + + Sbjct: 125 LPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIYVRNELSQLILIVLTNHSICEAKP 184 Query: 172 EQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 ++ IK +L Y+ ++ E IT+ L++ S S + F + +P Y+ Q Sbjct: 185 SIRNLRNADRIKTMLQYIQMHFSETITISTLARVALISESEVLRCFHRTIHSTPNQYLKQ 244 Query: 232 RRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 R+ +A L +T+++ +I+++ G+++ +F K F +GC+P +YR++ + C Sbjct: 245 YRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIGCTPLEYRKRDQQC 298 >UniRef50_C7H5Z6 Transcription regulator, AraC family n=2 Tax=Ruminococcaceae RepID=C7H5Z6_9FIRM Length = 319 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 7/268 (2%) Query: 17 GKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERG 76 L W S H H + TEL Y G +F + L+ DD+V++ Sbjct: 47 ESFRLLYISKSRFGGDWNSTVHTH-SCTELFYCLSGEGQFLLSGQLFPVKPDDMVIVNPQ 105 Query: 77 RLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSV 136 H S P + G + + + + + +E + TL + L Sbjct: 106 VEHTELSLNASPLEYIVLGVSGIEILFGKADSTYA-----IFNCRENRERMVTLLHMLLA 160 Query: 137 ILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREK 196 +S + + D L I + + E+ + +I YL+NNYRE+ Sbjct: 161 EADRSLDGCETVCQD-LLEVLLIWLVRCTTLSLQVEESPRSDNRECVEIKRYLDNNYREE 219 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 I+L+ L++ + Y+ H F K Y ISPI Y+ +RR+ E+K+ L NT S A+IS +G Sbjct: 220 ISLDTLAEVAHINKYYLAHTFQKAYGISPITYLNRRRIEESKYMLGNTGYSLAQISELMG 279 Query: 257 YENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + + +F++ F + G +P++YRRQ + Sbjct: 280 FSSPSYFSQCFRKAEGLTPNEYRRQVRQ 307 >UniRef50_C6JJH4 Putative uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJH4_FUSVA Length = 300 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 9/293 (3%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTIDSSLY 63 D ++ L V G FS K+ +G H H E E+I + +G I++ + Sbjct: 3 DENNKELAVHGNYEFPCAVYFSYVSKYTAGEIDWHWH-KEIEIINIYQGTLYVEIENKKF 61 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG 123 + D + I +H + + + + G + N + Q + P+I + Sbjct: 62 ILSKGDSLFINSEEMHFMKMNTKEECVIISFVFNKSLICGDKGNNIEQKYIDPLINCKEL 121 Query: 124 K--EVIKTLFNELSVILPQSKN---SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 E+ K +L+ N + + + L + +N K +S Sbjct: 122 SALELTKEDSKKLAQAYYSYSNNILGYEIIVRNILSEILLNIIRKNQKLLEKSSNNSNTD 181 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 IK +L ++ NY E I+L ++K+ F + ISPI Y+++ R+ A Sbjct: 182 KERIKRMLAFIYKNYSEDISLADIAKEAFIGEREALRCFARTIGISPIEYLLKYRIYTAA 241 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEI 291 L N+E AEI + G+ + +F+K+F R +G +P +YR+ + +I Sbjct: 242 EMLRNSEQPIAEICLQTGFNSPSYFSKVFCRMLGTTPREYRKNKVKSDIKNKI 294 >UniRef50_C6LDM6 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDM6_9FIRM Length = 298 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 105/285 (36%), Gaps = 13/285 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 + + L G + P+ + H H+ E E YV G + + Sbjct: 11 NANGQELKQHGTGLFPCGCYNAS-PEVQVPWHWHE-EYECSYVFHGAVTYHTPQGEFRLG 68 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV 126 D + + G LH V +G G+ ++ L Q + P+ A + + Sbjct: 69 EGDGIFLNSGTLHTVEVAPAGSLKKSDLVFHGRLIYGSRDSVLYQKYVQPLSAPDAFQTL 128 Query: 127 IK--------TLFNELS---VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 I + + + + ++ + LY A + Sbjct: 129 ILRRTVSWHAEILSRIKKAVRLCQNEPEGYEFTVRSLLSEIFFDLYCYRNAPAAETSAAT 188 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 ++ IK +L YL NY ++T+ +L+ F K +SPI Y+I+ R+ Sbjct: 189 ASENARIKQMLRYLQENYTRRVTVAELAAHANICERECLRCFQKVLHLSPIQYLIRYRIA 248 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + L ++LS EIS G+E+ +F K F + G +P+ YRR Sbjct: 249 RSCILLRESDLSVLEISNLCGFESPSYFTKTFRQITGGTPTQYRR 293 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 113/289 (39%), Gaps = 15/289 (5%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKW---ESGHHVHDNETELIYVKKGVARFTIDSSLY 63 +N E A R + + + G H H E E Y+ G + +++ + Sbjct: 10 ENKLENREYARNNDFPFRVDYEEITNYIGYSFGCHWHP-EVEFTYILSGSMIYQANNTQH 68 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAG-- 121 + A D++ + + LH+ + + G + + + +I + Sbjct: 69 LVKAGDVIFVNQNCLHSGKASNDCSCRYFAITFNPTLISGYKSSIFENKYIGEIINSDRI 128 Query: 122 ---------QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSE 172 + E I +L L + + + LY + + Sbjct: 129 PFVYFEGSKKENEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDEL 188 Query: 173 QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR 232 K + IK L Y+++NY+E +TL+ +S+ S S C F K +P NY++ Sbjct: 189 IKQTKNIMQIKAALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSY 248 Query: 233 RMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 R+ + L + ++ E + VG+ + +++++F +++ C+P++Y+ Sbjct: 249 RIQRSIPYLLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYKNN 297 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 6/262 (2%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 L + D W S H H +EL +V KG F I+ +D+++I H Sbjct: 21 LYVTCATSDKDWHSMEHSH-YFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTE 79 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 + P + G QFQ +E+ P+S V + + I + L + Sbjct: 80 FGNKEQPWEYIALGIEGVQFQYSEKEA---PYSYSVFSLSREHREIPWYLSTLVKEIQTQ 136 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + + L + + + + ++ + + Y+N +Y E ITL+ Sbjct: 137 QEGYQTICQNLLELILLSVARSTRQEFLSAPRQKTTRECRL--VEQYINEHYHEDITLDT 194 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 LS + Y+ H F +SPINY+IQRR+ EA++ L +T S +I G+ + Sbjct: 195 LSALVHINKYYLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQS 254 Query: 262 HFAKLFLRHVGCSPSDYRRQFK 283 +F++ F R G +P+ YR++ K Sbjct: 255 YFSQTFRRLTGTTPNAYRKKKK 276 >UniRef50_B0MH78 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MH78_9FIRM Length = 307 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 110/298 (36%), Gaps = 17/298 (5%) Query: 5 CFDNASETLFVAGKTPRLSRFAFSDDPKW---ESGHHVHDNETELIYVKKGVARFTIDSS 61 D + G S H H+ E E+I++ G + Sbjct: 9 STDQDRREVCPHGTIEFPCAGYDSVYSSHAINRIPWHWHE-ELEVIFLPSGTLDVRVPGK 67 Query: 62 LYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA- 120 + +A D +VI LH ++ ++ + + G++ + + + P+I++ Sbjct: 68 RFRMNAGDCLVINSNILH--EAETSNECRLHSLVFHTDLISGSDSSVFYKKYMYPLISSC 125 Query: 121 ----------GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYR 170 I+ F L ++ ++ + + +L Sbjct: 126 TLDCVLFSAEDTSGVSIRQCFMMAFDALANNREGYEFTVRECLSRLCFLLCTFYKPEISD 185 Query: 171 SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 + + IK+++ + + Y E + L +++ F + ISP+ Y+I Sbjct: 186 TSAKPDQDSFRIKEMIHMIQSRYAEPLKLCDIAQAANIGERECLRCFHRTLGISPMQYLI 245 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 + R+++ L NT S AEIS R G+++ +F+ F R CSP +YR+ K + Sbjct: 246 RYRLSKGALLLINTNKSIAEISTRCGFDSPSNFSLTFKRKYQCSPREYRKNNKTLLSS 303 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 4/248 (1%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 W+ G +V ++ + VKKG FTI Y A +I G +D +DP + Sbjct: 66 WKFGPYVRESYV-IHIVKKGKGVFTIGGKSYELEAGQAFIIRPGEETIYKADDDDPWSYM 124 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 +G++ + E+ + S P+I Q T N + Q A Sbjct: 125 WVGFHGYRAEDFIESMGYKKDS-PIIKIEQMDTC-ATCINNML-EYSQITRINEVKRQSA 181 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 A + +N ++ + +K + ++ Y KI ++ ++ S S+ Sbjct: 182 LMMLFATIMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSH 241 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 + F KE +SP Y+I R+ +A L +++ I+++ GYE+ F+K F + G Sbjct: 242 LTGSFKKEMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFG 301 Query: 273 CSPSDYRR 280 SP +R Sbjct: 302 MSPKSFRN 309 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 62/295 (21%), Positives = 115/295 (38%), Gaps = 15/295 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTID 59 + D + L + G + +SD K+ +G H H+ E E+I VK G +D Sbjct: 7 EIIVDENKQQLELFGTPMFPCKACYSDINKFVTGDISWHWHE-EIEVIRVKSGSIHLYLD 65 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 +S +V + D V I LH + + ++ + G ++ Q P++ Sbjct: 66 NSDFVLNEGDGVFINSNILHYIRAGTSEECILNSLVFNKNLISGGVQSVFEQNFVNPIVE 125 Query: 120 AGQGK-----------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNA 168 E +S+ + + ++ I+ Sbjct: 126 NKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGYEILVREYLSHIWYIMLKNIQDLN 185 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 IK+IL +++ NY ++ITL ++K S F ISPI Y Sbjct: 186 LNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIAKVVNLSERECLRCFKNTLGISPIQY 245 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +++ R++ A L + IS VG+++ +F+K+F R +G +P+ YR + K Sbjct: 246 ILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSKIFKRFIGITPTQYRNKSK 300 >UniRef50_A8RUK1 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RUK1_9CLOT Length = 334 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 47/292 (16%), Positives = 108/292 (36%), Gaps = 15/292 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKW---ESGHHVHDNETELIYVKKGVARFTID 59 Q + E L G + ++ H H E EL + +G + I+ Sbjct: 37 QIITNEHQEELKEHGTYEFPVLVSDEALSRFYTSSFQWHWH-TEIELTLITEGTMVYQIN 95 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 ++ A + +H + + + G + +++ ++ P++ Sbjct: 96 DQIFYPRAGQALFGNSNTMHTGRMENGRDCRYISITFHPRLLYGYQGSRIASRYTDPLME 155 Query: 120 -----------AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNA 168 + + L ++ I ++ + +LY + Sbjct: 156 NAALPAVCFDLSQEWHGEAVGLLEDIIRIDSLRYDTYEMDIQMDLFRFWKLLYLHCRPDR 215 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 + K I+ +L +++ NY+ ITL+ +S+ S C F + S Y Sbjct: 216 EPAHTAGRKNQERIRQMLSFIHENYQSDITLDDISRHIHICKSECCRVFKGYMKESLFEY 275 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +++ R+ ++ + +L+ E + R G+ + ++F+K+F + GCSP YR+ Sbjct: 276 LLKYRIEKSIPDVLEGKLTMTETAIRAGFTDPNYFSKVFHKIKGCSPRSYRK 327 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 98/253 (38%), Gaps = 7/253 (2%) Query: 26 AFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV 85 P G V D+ + V G + + + D+ + + +L A+D Sbjct: 26 HEYCVPGHTWGPGVRDHYL-IHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQLITYAADE 84 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 DP G + PV + V + L+N L + Q Sbjct: 85 TDPWEYYWVGFNGACANKLVQQTPFSDL-HPVHHCKDPQAVREALYNI---YLSRGPEPQ 140 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 +L + Y + ++A + + + + Y+ NY I+++ ++K Sbjct: 141 CEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQ--YVLSAIKYIQFNYSHDISVDDIAKA 198 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S S++ F SPI+Y+ R++EA L N+ LS AEI+ VG+ + +F++ Sbjct: 199 VGVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSR 258 Query: 266 LFLRHVGCSPSDY 278 +F + G PS Y Sbjct: 259 VFKKVKGVPPSKY 271 >UniRef50_B5CQG2 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQG2_9FIRM Length = 277 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 8/261 (3%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 L + W S H H TEL +V G F ++ + D++VI H Sbjct: 21 LYSTYSKYEEDWSSYPHTH-YFTELFFVLSGSGSFLVEDETFPIAKHDLIVINPNITHTE 79 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 S + DP + G F + N+ L + + + K+ + F + S Sbjct: 80 KSSLEDPLEYIVLGVDGLNFVIDDANEYL------LFHSDEMKDRLDFYFRTILEETENS 133 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + + L + ++ + + Y+++++RE ITL++ Sbjct: 134 QKDYE-KVCQNLLNILVVHLSRYASSSVEIFPFHKMESRECSRAKRYIDSSFRENITLDK 192 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L++ + + Y H FT+ Y ISP+NY+ Q+R+ ++ LT+T++S A+I+ + G+ + Sbjct: 193 LAEIAQINKYYFSHTFTETYGISPMNYLTQKRIFTSQELLTSTDMSLAQIAQQCGFSSSS 252 Query: 262 HFAKLFLRHVGCSPSDYRRQF 282 +F + F + G +P+ YR+QF Sbjct: 253 YFTQCFRKSCGMTPTAYRKQF 273 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 5/249 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H HD E E++Y++KG A F +D Y + + G +H ++ N +L Sbjct: 36 PHWHD-EFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNPEPYAIVFSL 94 Query: 97 YGFQFQGAE--ENQLLQPHSCP--VIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDA 152 +G + +++ LQ S ++ E + L + + + + + Sbjct: 95 SMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWKEKPKGYELLVKGY 154 Query: 153 FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSY 212 L+ + + A +++ K IK L ++N+NY I ++ L+K S Y Sbjct: 155 LFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDIDLLAKLANLSKFY 214 Query: 213 ICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVG 272 C F + ++P++Y+ + R+ +A + NT LS +EI++ VG+ NV +F K+F +VG Sbjct: 215 FCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNNVSYFIKVFKEYVG 274 Query: 273 CSPSDYRRQ 281 +P Y++ Sbjct: 275 VTPFKYKKN 283 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 8/270 (2%) Query: 19 TPRLSRFAFSDD---PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 +P L + + P G V D ++ ++ G ++ + + Sbjct: 16 SPDLYLCYWGKERCAPLHSFGPGVRDI-YKIHFIHSGRGIVKVEGETFELTGGQAFLAYP 74 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS 135 R+ +D DP T G Q L P S PV+ ++ L+ EL Sbjct: 75 ERVIFYQADEVDPWTYSWIGFNGEQVAEILSRTRLTPAS-PVLPMDTH--LMPQLY-ELL 130 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 +S ++ L + +L + KD I L +L+++Y E Sbjct: 131 NEAEESNTTRDLRLQTLLYEFMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSE 190 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 ++++ QL+ Y+ F + + P Y+++ RM +A L N S AE++ V Sbjct: 191 EMSVGQLAAIVGLDRKYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSV 250 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 GY++ F+K+F + VG SPSDYR Q++ Sbjct: 251 GYQDALLFSKMFKKTVGTSPSDYREQWQKS 280 >UniRef50_A7VRD3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRD3_9CLOT Length = 277 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 6/279 (2%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M F + + D P W + H HD E++YV G ++ Sbjct: 1 MAHEHFYVKRSERESLVQPELIYTGLLEDAPNWFNIQHSHD-FCEILYVAGGAGEAILEG 59 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 + D+VV+ G LH SD P A+ F G L V++ Sbjct: 60 KKFRLAPGDLVVVNPGTLHEERSDAKAPLRLIFLAIRDFAVPGLPAG-CLSQEKYRVLSC 118 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 G+ + + EL S+ + L +L + E ++ Sbjct: 119 GEYRYKMDIYLRELLQE-TSSQIEFYQEISQGLVSALLVLVMRLIRINPEDEAALSQE-- 175 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 + I YL+ N+ ITL+ LS+ S Y+ H F ++ +SPI Y+ +RM +A Sbjct: 176 -CQKIKEYLDQNFTSPITLDSLSETVYISKHYLSHLFKEQTGVSPIKYLTSKRMEKACEL 234 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 L+ TEL +E+S VGYEN +F+++F R G SP YR Sbjct: 235 LSETELPVSEVSKAVGYENPLYFSQVFKRIYGISPVKYR 273 >UniRef50_C5RYV2 AraC family transcriptional regulator n=1 Tax=Actinobacillus minor NM305 RepID=C5RYV2_9PAST Length = 300 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 56/286 (19%), Positives = 120/286 (41%), Gaps = 11/286 (3%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPK---WESGHHVHDNETELIYVKKGVARFTIDSSL 62 D +++ L G + K H HD E + YV +G F I+ Sbjct: 13 IDRSNQELTNHGDFTFPLAVYKNTLSKNLLGYVIWHWHD-EYQFSYVTQGEIYFYINDQT 71 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV----I 118 ++ + I G +H++ + + +T + F + + + Q + + I Sbjct: 72 FILKEGQGIFINTGCMHSIKAVNDPESTYVCINIDKKLFSSFKGSVIEQKYLNTLTQSAI 131 Query: 119 AAGQGKEVIKTLFNELSVILP---QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 +E N+L I S + TLA++ + Sbjct: 132 FLDLSEEWHIECINKLKDIYQFYVDKSFSFEIDICINLMQTLALVVKNALNPILLTTIES 191 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 + IK IL +L+ +Y EKITLEQ+++ + + C F ++ +++ Y+++ R+ Sbjct: 192 KDEYQKIKKILSFLHQHYAEKITLEQIAQHIFLNKNECCRLFKRKTKMTIFEYLLEHRLN 251 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 ++ L +++ S ++I+ G+ V ++ F ++VG +P++YR++ Sbjct: 252 KSIELLIHSDKSISQIAIDTGFSTVSYYIDTFHKNVGITPNEYRKR 297 >UniRef50_A8SCU0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SCU0_9FIRM Length = 310 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 95/284 (33%), Gaps = 14/284 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 D A G D + H H+ E E I G ++ + Sbjct: 26 DAAGREQTQHGSPLFPIACYAEDLSCFSVAWHWHE-EFEFILAALGPIHVDVNKTRLTLQ 84 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG--- 123 V I G LHAV ++ + G + Q P++ G Sbjct: 85 TGQGVFINSGALHAVEPAEGRAL--LHSGVFQPRLVGGMDTVFWQKLIRPLLQPGTPPFF 142 Query: 124 --------KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 + + E + + + L +L + + + Sbjct: 143 LLDEAVPWQRQVLLCLREAWKGVADEPFDYENRVRYHLTAALRLLITQCVSGKVKVSEQE 202 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 +K +L Y+ +Y E++T+E+L+ S S F + I+PI YV Q R+ Sbjct: 203 QIASERMKQMLRYVEEHYAEELTVEKLAGCVALSESACLRSFRQFLGITPIQYVKQFRVE 262 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 +A L +T L E+ G+ + +F K F C+P +YR Sbjct: 263 KAAELLRSTRLKTGEVGLECGFSDASYFIKTFREIKHCTPREYR 306 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 100/287 (34%), Gaps = 13/287 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 D + G + + H H+ E E I KG ++ + Sbjct: 47 DAEGREMVQHGSALFPIACYAENLKSYSVAWHWHE-EFEYILAMKGPLTVDVNKTRVTLQ 105 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG--- 123 + V + G LHAV A ++ + G + Q P++ Sbjct: 106 TNQGVFLNSGILHAVEQAEKGEA-LLHSGVFHPRLVGGMDTIFWQKLIRPMLQPDAPAFF 164 Query: 124 --------KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 + + E + + + + L +L + + Q Sbjct: 165 LLDEAVPWQAQVLACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQE 224 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 +K +L ++ +Y E++T+E+++ S S F + I+PI YV Q R+ Sbjct: 225 QIAAERMKQMLRFVEEHYAEELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVE 284 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +A L +T L EI G+ + +F K F C+P +YR +F Sbjct: 285 KAAELLRSTRLKTGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 109/287 (37%), Gaps = 14/287 (4%) Query: 14 FVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVI 73 + P + + + H HD E E Y +G F +D+ + A + V I Sbjct: 15 HGNERQPFGTYWYRYGPGEHVIDCHWHD-EAEFFYCLEGETLFQVDTDYFPVGAGEAVFI 73 Query: 74 ERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV--------IAAGQGKE 125 + G +HA + + + A + + + P+ + Sbjct: 74 DGGDIHAAHAHGDQGCAFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETA 133 Query: 126 VIKTLFNELSVIL---PQSKNSQTSSLWDAFAYTLAILYY--ENFKNAYRSEQGYIKKDV 180 +L + ++ ++ LA + ++ S + K Sbjct: 134 ADLSLLEHIVALMRSCSTESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKID 193 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 +K ++ ++ +NY I L +L+ S C F R +P++Y+ R+ +A Sbjct: 194 RLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAEL 253 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 L E ++I+ VG++N+ +F ++F + + CSPS++R++ + Sbjct: 254 LREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQASVE 300 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 108/279 (38%), Gaps = 13/279 (4%) Query: 11 ETLFVAGKTPRLSRFAF--SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + + G + + P++ +H H+ E ELI++ G TI+ + A Sbjct: 7 KEIKHHGTADFPAGYYHVTESHPQYAMPYHWHE-ELELIHIISGTFHVTINETTRNAVPG 65 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA-EENQLLQPHSCPVIAAGQ----- 122 DI+++ G LH ++ L + + Sbjct: 66 DILLVNSGGLHGGTPY---DCVYECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYFPAG 122 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY-ENFKNAYRSEQGYIKKDVL 181 I +L L ++ S + +L + + +S+ + L Sbjct: 123 DDTAIHSLLERLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYL 182 Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K++L Y+ +Y EKITL +L++ S Y CH F++ +PI+YV R+ A L Sbjct: 183 LKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLL 242 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 S +I+ G+ +V +F + F ++ G SP Y + Sbjct: 243 AGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_B7DQ49 Transcriptional regulator, AraC family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQ49_9BACL Length = 344 Score = 218 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 103/267 (38%), Gaps = 13/267 (4%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H H +E E I V +G + S +V D+ ++ G LH++A+ P+ Sbjct: 79 VNLHWH-SEAEFIVVTRGSVCLQVGSERHVLADGDVALLSGGELHSMAAPGKGPSECKAI 137 Query: 95 ALYGFQFQGAEENQLLQPHSCP-----------VIAAGQGKEVIKTLFNELSVILPQSKN 143 +G +++ Q + P + ++ + E+ L + Sbjct: 138 VFGLDLLEGPSSDRVQQSYLSPLASGKLLLPGAIAHDHPVRQYLAARLCEIVEALEEQPV 197 Query: 144 SQTSSLWDAFAYTLAILYY-ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 ++ LA L+ E + ++ +K +L Y++ + +K+ L L Sbjct: 198 GYELAVKGCLYDVLAQLFRAELLVEHSPRREMDDRRADTLKAVLTYIDAHLSDKLRLADL 257 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 ++ S + C F + P+ YV +RR+ A L + S I +G+ +V + Sbjct: 258 ARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITAIGMDLGFHDVSY 317 Query: 263 FAKLFLRHVGCSPSDYRRQFKNCFAEQ 289 F K+F + C+P YR+ + Sbjct: 318 FIKVFRSYKHCTPLAYRKALLKKPPRR 344 >UniRef50_B1R0P6 Transcriptional regulator, AraC family protein n=2 Tax=Clostridium butyricum RepID=B1R0P6_CLOBU Length = 297 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 51/288 (17%), Positives = 100/288 (34%), Gaps = 12/288 (4%) Query: 5 CFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYV 64 + L G D K H HD E E + V +G A + Y Sbjct: 9 TTNEHGRELVEHGTVLFPVACYDDDLIKKSVPWHWHD-EFEAVIVSEGTALIAAGTKKYT 67 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV------- 117 + + I G LHA S + + G+ ++ + P+ Sbjct: 68 LKQGEGIFINAGILHAAWSKNCSICHLHSITFHPRLIGGSIDSIFWHNYVQPLLTNPIVK 127 Query: 118 -IAAGQGKEVIKTL---FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ 173 I + K + + + + L + + + + Sbjct: 128 HIHLDSSEAWHKEATHAIESAWNSCANEPFGYEFQVHSSLSQLILHLSAYHPVISRQPSE 187 Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 ++ +K +L ++ ++Y ++I + ++ S S F I PI Y+ Q R Sbjct: 188 KVLRNSNRLKLMLQFIQDHYHDQINVSMIADTAMISESECLRCFRNIIGIPPIQYLKQFR 247 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 + +A LT+T + +I + G+++ +F K F C+PS+YR+ Sbjct: 248 IQKAVEFLTSTNETITKIGAKCGFQDTSYFVKTFREQKKCTPSEYRKN 295 >UniRef50_A8S9Z6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Z6_9FIRM Length = 285 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 101/283 (35%), Gaps = 17/283 (6%) Query: 11 ETLFVAGKTPRLSRFAFSDDPK--WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + G P + H H++ EL++VK+G+ + Y A+ Sbjct: 8 QETKQHGAVRFPFNLYPCTIPGDFQQVALHWHES-MELVFVKQGMGLVQVGVVTYPAYRG 66 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQF---QGAEENQLLQPH-----SCPVIAA 120 DI + G LHA+ + + L P S PV Sbjct: 67 DIFIFAPGTLHALRQAEGQRMEYENIIFEPELLGGAEDLCAEKYLLPLQSGRLSLPVRLT 126 Query: 121 GQGKEVIKT--LFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 ++ EL + + A LA+L + + Sbjct: 127 PNDLCYLQAAACLRELEDANRAKRPGYELLVKGALLRFLALLIAQ----GRQCLSTETAD 182 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 +K +L +L+ +Y E + + + S S+ F + S I ++ + R+ A Sbjct: 183 TQRLKTVLQWLSAHYAEPLRVADAAGVCSFSASHFMRWFRQMTGQSFIAFLNEYRLNTAA 242 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +L T+ + I+ R G+EN+ +F + F H G +P DYR++ Sbjct: 243 EALRTTDETVLTIASRCGFENLSYFNRAFKAHFGMTPRDYRKK 285 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 104/279 (37%), Gaps = 14/279 (5%) Query: 12 TLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 + P + H HD E E+I +KKG ++D + Y A DI+ Sbjct: 18 KIHTPDDFPYNTYLCSIPLDFQSVNLHWHD-EVEIIVIKKGSGIVSVDLTTYSVSAGDII 76 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI-----------AA 120 + G+LHA++ N+ + + + P+ Sbjct: 77 FVLPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVINNQ 136 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 + T NE+ + + S+ L L +N + K Sbjct: 137 TPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPINQKSLK-- 194 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 IK IL Y+ NN++E I +E ++ S SY F + +S I Y+ R+ A Sbjct: 195 KIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIAAEL 254 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 LT T + +I++ G+ N+ +F + F + G SP YR Sbjct: 255 LTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 8/265 (3%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 F+A P S + H H+ E+ Y+++G + I+ S Y+ D+ ++ Sbjct: 7 FFMAEGRPFASE-RIAGVNDNMVRSHYHE-FFEIYYLEQGRRQHIIEDSQYILQPDEFII 64 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN 132 +H + + P + + + L + I L Sbjct: 65 FPPFVMHHSFEENDVPFRRLLLYFNPEVIRSPQILRTLSERARVYKLPRAQSAPIYNLMK 124 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 ++ + + + L LA+ N A R EQ + DI+ YL+ + Sbjct: 125 DILQE-QERDDLYSRELITLMVNALALQLVRNSDEAARPEQ-----RNRVTDIINYLHEH 178 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 + E ITLEQL+ F S ++C EF + + + Y+ R+ A+ L ++ S EIS Sbjct: 179 FTEDITLEQLANHFYVSQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEIS 238 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSD 277 RVG+ NV HF +++ G SPS Sbjct: 239 KRVGFSNVTHFNRVYKSVTGMSPSQ 263 >UniRef50_C6CWE3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CWE3_PAESJ Length = 278 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 4/267 (1%) Query: 18 KTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGR 77 ++ L SD P W H HD+ E+I V G FTI Y A DI+V +G Sbjct: 11 QSHLLYAGKVSDTPNWNFPSHKHDDLHEIIVVCGGQGMFTIGGQSYSASGGDILVYNKGV 70 Query: 78 LHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVI 137 LH S +++P T C + E+ ++ P PVI + + I+ L + Sbjct: 71 LHEEQSSIDNPLITYYCGFSLPKA-SPSEDWVIPPDVEPVIRSSRVFPEIEALMKMIVDE 129 Query: 138 LPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKI 197 ++ + +L + ++ L + I Y++ N+ + I Sbjct: 130 SSIKEDGYEGISRYLINSVILLLRRAVRNQQHIKQES---NTGLAEQIKDYIDRNFTQNI 186 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 +L+ L ++F + YI H F YRISPINY I RR+ EA L TE+ E++ +GY Sbjct: 187 SLKDLGRQFHVNPYYISHVFKDHYRISPINYAIHRRIGEATRLLVTTEMKVWEVAKLLGY 246 Query: 258 ENVDHFAKLFLRHVGCSPSDYRRQFKN 284 +N ++F+ +F R G SP+ +R + Sbjct: 247 DNPNYFSIIFRRVTGLSPNRFRESNQQ 273 >UniRef50_A8SQN1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SQN1_9FIRM Length = 294 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 99/261 (37%), Gaps = 12/261 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H+ E+IY+KKG T+D + + DI++I G +H ++ Sbjct: 35 SVSLHWHE-FMEIIYIKKGKGNVTVDFTTHYVEEGDIIIILPGHIHGISQHEGYSMEYEN 93 Query: 94 CALYGFQFQGAEENQLLQPHSCPVI-----------AAGQGKEVIKTLFNELSVILPQSK 142 F+ + L P++ + + N + + ++ Sbjct: 94 ILFSVDMFRSKNHDSLDSEFFLPLLAGDVDIKSIYDKDDPLYPQLSSCLNRVDKLCSETP 153 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 +L + +L+ + + + K IL Y++ NY+E I++ + Sbjct: 154 KGYHLALKGCYFEFFYVLFTNSTVRDEADRKNRSRDLERTKLILSYIDENYKEAISITDI 213 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 + S S+ F +S ++Y+ R+ A L+ + S ++ G+ N+ + Sbjct: 214 ASYCGFSESHFMRFFKNTMGVSFVSYLNDFRLNVAARLLSTNDDSVLSVAENCGFFNLSY 273 Query: 263 FAKLFLRHVGCSPSDYRRQFK 283 F ++F + G +PS YR Sbjct: 274 FNRMFKKKYGVTPSRYRETHN 294 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 104/283 (36%), Gaps = 17/283 (6%) Query: 12 TLFVAGKTPRLSRFAFSDDPK--WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 + P + H H++ E+I VKKG T+D Y A A + Sbjct: 56 EIKEHAGRDFPFNIYPCSIPADFRQVPVHWHED-MEIIAVKKGRGVVTVDMEPYEARAGE 114 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV--- 126 VV+ G+LH ++ ++ AE + P+ G GK + Sbjct: 115 AVVVFPGQLHGISQCGSEAMEYENIIFLPSMLMSAESDLCTYDFLRPMTEGGIGKPLHIT 174 Query: 127 --------IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 L + + + + + L + + K Sbjct: 175 GGLPDYGAFMECIGILDQLCGKKNYAYQMGVKGTL-FWFLGLIAGIWGPEAAGQPR--KS 231 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 +K +L Y+ +Y EKIT+E ++ S S+ F + + I Y+ + R+ +A Sbjct: 232 RERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAA 291 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 L T ++ R G++N+ +F +LF R G +P +YR+ Sbjct: 292 GMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRKN 334 >UniRef50_B4AEM1 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AEM1_BACPU Length = 297 Score = 216 bits (551), Expect = 7e-55, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 108/293 (36%), Gaps = 20/293 (6%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFS---DDPKWESGHHVHDNETELIYVKKGVARFTI 58 Y D + L T + D H HD E + +++ +G A F I Sbjct: 4 YHFLIDYNLKELTEHSTTTWSIALYHTKICDHRSGHIPLHWHD-EFQFVFILEGEAEFHI 62 Query: 59 DSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 + D V I G LH T + N+L P + Sbjct: 63 NEETICLKEGDGVFINCGCLHMAKDANGTTCTYLCLNVSPHFIT---ANELFTTFVHPYM 119 Query: 119 AAGQGK-----------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKN 167 A Q I + ++ ++ L L F+ Sbjct: 120 HASQTPYILLNRKDHWPNHIYQCIQTIQRLIDETPAYYELELNIQLITMWKCLLQNGFQI 179 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 Y + Q K+ +K +L +++ +Y EK+ L+ +++ + S S C F + +P++ Sbjct: 180 KYDARQHD--KNERMKPMLNWIHQHYHEKVLLQDIARAGQLSRSECCRYFKDILKKTPLH 237 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 YV + R+ ++ L T+ + EI+++VG+ + +F +F R +P YR+ Sbjct: 238 YVNEYRVQQSLILLQETDFNITEIAYKVGFNSTSYFISMFKRIKNTTPLAYRK 290 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 216 bits (550), Expect = 9e-55, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 12/277 (4%) Query: 15 VAGKTPRLSRFAFSDDPKWE---SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 V+ TP F D + H H NE E++Y+++G+ +F +D Y + + + Sbjct: 13 VSHGTPDFPLFVHEDIFVYRNGVVNPHWH-NEFEILYMERGIGKFYVDGYEYKLNEGEYL 71 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA------AGQGKE 125 + G +H+ + E + + P+I + E Sbjct: 72 FVNSGSIHSGLEMIKRSIGY-AIVFDLRLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDE 130 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 I+ + + + + ++ + + K IKD+ Sbjct: 131 HIRNDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFKY-YAERRNQDGRLGYKIERIKDV 189 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 L Y+N NY + ++L++LS++ S Y+C F + R+SP+ Y+ + R+ +A L NT+ Sbjct: 190 LNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVEYINKVRVDKAMELLINTD 249 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +S +EI++ G++N+ +F K+F +++ +P +R+Q Sbjct: 250 MSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQN 286 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 13/274 (4%) Query: 17 GKTPRLSRFAFSDD--PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 G F D P++ +H H E E+I + +G T+D + A +D++ + Sbjct: 13 GTYEFPFEFHHIDHTHPRYVMSYHWH-VEYEIIRILEGSLTVTLDEKSFTAVKNDVIFVH 71 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQ------GAEENQLLQPHSCPVIAAGQGKEVIK 128 G LH+ F G ++L + I Sbjct: 72 SGILHSGIPH---DCVYQCIVFDMNTFLKNNPVCGEYIQKILHQETMLFPHFSDEHPQIL 128 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN-FKNAYRSEQGYIKKDVLIKDILF 187 + L + + +++ F + +++ + F + K+ + +K +L Sbjct: 129 NCISVLFDAMYEKDTGYELTVFGQFYHFFGLIFSNHYFIENPTRTRRDYKRILQLKQVLE 188 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 ++ NY ITL++LS S Y C F++ +P++Y+ ++R+ EA L T+ S Sbjct: 189 FIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQLAATDDS 248 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 EI++R G+ ++ +F + F ++ G +P Y+R+ Sbjct: 249 ITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_C6JDN8 Putative uncharacterized protein (Fragment) n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDN8_9FIRM Length = 301 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 108/292 (36%), Gaps = 15/292 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWE---SGHHVHDNETELIYVKKGVARFT 57 M + D + L G D +E H H N+ E+ ++G A + Sbjct: 3 MRKILVDETNRELCEHGTVGFPMTVNHDDLWAFEGKSVPIHWH-NDLEISLPREGEAIYQ 61 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATT--------CTCALYGFQFQGAEENQL 109 + Y D++++ R H+ S N A C YG + Sbjct: 62 VYRKSYTVRPGDVLLLNRNVPHSCHSPNNSHARYSTFLTRPDFICGEYGSDVERRCFRPF 121 Query: 110 LQPHSCPVIAAGQGKEVIKTLFNELSV---ILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 LQ + P I +T+ +L+ + Q + ++ E+ Sbjct: 122 LQNSAVPCILLTSESSCTRTVIQKLNETEALFDQKTFCYELKIKGLLCEIFGMILCEHQN 181 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 + + + ++ +L YLN ++ I+L++L+ + S C F K + Sbjct: 182 DLAKFIPANQLELERLEQMLDYLNTHFGSVISLQELADQVHLSREVCCRLFKKMTGKTIT 241 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 Y+ + R+ ++ + + + S +I+ G+ N FA+ F R GC+P +Y Sbjct: 242 GYLEEYRVNQSLPLVQSCQYSMIQIADMTGFSNASRFARAFRRQFGCNPGEY 293 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 106/285 (37%), Gaps = 14/285 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDD---PKWESGHHVHDNETELIYVKKGVARFTIDS--- 60 D S +F L + F + P G N YV G D+ Sbjct: 2 DKLSFNIFPNVNFIDLCMYQFGHEQCEPGHSFGPAT-RNHYLFHYVLSGTGTLMADNAKG 60 Query: 61 --SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 Y + +I G+++ +D P G + + A L + PV Sbjct: 61 ITQTYNIKSGQGFLIFPGQINTYIADDKLPWEYIWIEFDGLRVKEALTTTELTK-NNPVY 119 Query: 119 AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 K++ + L E+ I S + + + Y + + G Sbjct: 120 HTHS-KDIREKLVEEMLYITRHPSESPYHLIGHMYLFL---DYLMQSAKSSKLVPGGKMS 175 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 D IK+ + Y+ N++ I++E ++ + SY+ F SP +++ RM +A Sbjct: 176 DFYIKEAMNYIEQNFQNDISIEDIAGVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKAT 235 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 L T LS A++ VGYEN HF++ F G +P ++R + K Sbjct: 236 ELLKLTSLSIADVGSAVGYENQLHFSRAFKNIYGVAPREWRNEHK 280 >UniRef50_A9KSF8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KSF8_CLOPH Length = 292 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 127/288 (44%), Gaps = 17/288 (5%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSS 61 Y + + + T+F A K R A+ H H + TEL Y+ G +++ ID Sbjct: 6 YDLTYSDFNPTVFFASKMRVTKRTAY----------HAHQDFTELTYILSGTSKYRIDDI 55 Query: 62 LYVAHADDIVVIERGRLHA-VASDVNDPATTCTCALYGFQFQGAEENQL-LQPHSCPVIA 119 Y A D++V G H + D +P FQF+ EN + L V Sbjct: 56 YYDVKAGDMIVCNPGVFHQNMLLDGEEPLVEFCTGFTDFQFKNMPENTIQLSNQGHIVHL 115 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ----GY 175 + + K L ++ + + L L +L E + +++ Sbjct: 116 SSEAKRETSRLCYDMLAENEAGQVGKYFMLKAQLIQMLMLLMREVIEAPKVTQKGCNFET 175 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 K +K I+ YL NY KI+L+Q++ S YI F +E SPINY+I+ R+ Sbjct: 176 YSKSYAVKRIINYLMENYEHKISLDQIAHNMYLSPVYISKIFKEETGESPINYLIKIRLE 235 Query: 236 EAKWSLTNTE-LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 +AK L+ E S I+ +GY++V HF+KLF ++ G SP +YR+ Sbjct: 236 KAKEILSEREGGSIKNIANEIGYDDVYHFSKLFKKYFGISPQNYRKSL 283 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 12/257 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H +E E +Y+ G ++I+ Y A + + I +LHA S P C Sbjct: 34 FFYLHWH-SEFEFVYILSGAILYSIEDKEYCVKAGEGLFIHSNQLHAARSFNGMPCEACV 92 Query: 94 CALYGFQFQGAEENQLLQPHSCPVIA-----------AGQGKEVIKTLFNELSVILPQSK 142 + F +++ P++ + + ++ L +EL + ++ Sbjct: 93 VLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENYFKCEEEWQRLVMKLLSELDDLKYENV 152 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 + L + Y + A + + K ++ +L Y++ NY+E+ITL L Sbjct: 153 SENELLLKSKIFEIWHLCYKNSVALAPQGRKNRNYKLERMQPVLNYIHENYKEEITLMAL 212 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 +K S CH F + ISPI YVI+ R+ ++ LT T+ A+I+ VG+ N+ + Sbjct: 213 AKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQSCTLLTETDWKIADIARNVGFNNISY 272 Query: 263 FAKLFLRHVGCSPSDYR 279 F + F++ +GCSPS YR Sbjct: 273 FNREFIKAIGCSPSKYR 289 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 105/258 (40%), Gaps = 8/258 (3%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 D ++ G + D+ + Y+ G R+T++ S++ D ++ +D DP Sbjct: 30 DSLYQWGPGIRDHYL-IHYIISGKGRYTVNGSVHTLTPGDAFLVYPNTEVIYQADAQDPW 88 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 G + + G E+ + L + + +N + Sbjct: 89 EYTWVGFTGSDAATILRATDFTKAHPYIHSVSNGNEIKRQLMHIYDARGTEFEN--ALEM 146 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 TLA+ F +A S+ + ++ + Y++ NY IT+E ++ S Sbjct: 147 TGRLYTTLAL-----FVSAATSKPPQNSANSYVQKGIEYISANYSYPITVEDIASYIGLS 201 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 S++ F +SP Y+ R+ +A + L ++ LS I+ +G++N +F+K F + Sbjct: 202 RSHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSIGFDNSLYFSKTFHK 261 Query: 270 HVGCSPSDYRRQFKNCFA 287 G SP +YR ++K Sbjct: 262 IKGLSPKEYRSKYKKAQE 279 >UniRef50_UPI0001789C32 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C32 Length = 297 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 104/279 (37%), Gaps = 14/279 (5%) Query: 17 GKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERG 76 + F K H HD+ ELIY +G A F I S D++ + +G Sbjct: 15 DQDFPFDVFHIIPPGKEVLHLHWHDD-LELIYFIRGNATFYIGSETVKPEPGDLMFVNKG 73 Query: 77 RLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA-----------AGQGKE 125 +H +D + + + P + Sbjct: 74 MIHTGFADDEHQVEYYALVFHSVLAESRVAGSSHVQITNPYASGKRFFPILLPVTDAYNS 133 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYI--KKDVLIK 183 +I + ++ Q ++ L L + + + + K Sbjct: 134 LIAGIVKQMIAEYEQQAIGYQVAIQSMLHLLLVHLSRHHHLHGPTGSADTVGAELTDRFK 193 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 +++ ++ +Y EK+T++Q + S + C F K + + YV R+ A+ L + Sbjct: 194 ELIAFVERHYPEKLTVQQAAGIVNLSEYHFCRTFKKVTGKTFVEYVNLLRINAAEQLLIH 253 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + EI+++VG+ +V++F+++F ++ SPS R+++ Sbjct: 254 SSDPITEIAFKVGFGSVNYFSQMFRQYKRHSPSQCRKRY 292 >UniRef50_C6L8V9 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L8V9_9FIRM Length = 300 Score = 214 bits (546), Expect = 3e-54, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 122/286 (42%), Gaps = 21/286 (7%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 +DN L++ S+ P ++ H H++ ELIYV +G + I+ + Sbjct: 16 YDNPGVPLYIRTGI-------LSNYPDMKALCHWHED-IELIYVIEGEMNYRINDRDILL 67 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ--- 122 D +V+ +LH + + + + ++ Q + P I Sbjct: 68 KEKDCLVVNSRQLHYGYAHLRRECRFICILFHPGLLNASP--KIYQYYVAPFIENKNIAY 125 Query: 123 --------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 E ++ L N + ++ + K++ IL+ ++ + Sbjct: 126 FHYAADSANHEQVQALLNRILLLKTEEKDAYELEAISTLYLLWRILFLQHKSLLEQEPAY 185 Query: 175 YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 L K ++ Y+ +Y++ +TL+ ++ S S C F + R SPI++ + R+ Sbjct: 186 DYSDLTLQKKMVSYIYEHYQDTLTLDAIAASGNISRSKCCIIFKRYLRQSPIDFANKYRL 245 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +++ L NT S A+I+ G+ ++ +F+KLF R GC+P++YR+ Sbjct: 246 EVSRYLLANTRSSIAQIAVSCGFNHLSYFSKLFCREYGCTPTEYRK 291 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 86/238 (36%), Gaps = 6/238 (2%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 + + V G F + + D+ +L +D P G Sbjct: 40 RDHYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQLIRYTADEQQPWEYSWVGFNGAC 99 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 QL PV + L N S Q ++ +++ +A L Sbjct: 100 A-HKLAAQLPFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQD--EAAMVGYLYLFIAAL 156 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 E + + + + Y+ NY I+++ ++K S S++ F Sbjct: 157 MRE---TSAGKPHTASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLYRVFMLN 213 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 SPI+Y+ + R+ EA L LS AE++ VG+ + +F+++F R G PS Y Sbjct: 214 VGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPSKY 271 >UniRef50_A9KN44 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=A9KN44_CLOPH Length = 278 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 7/257 (2%) Query: 26 AFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV 85 +P ++ G V D+ + Y+ G + + + + D+ +I +D Sbjct: 28 YQRCEPNYQWGPGVRDHYL-IHYIVSGKGYYETNHKTFPLTSGDVFLIYPDTQVTYYADA 86 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 DP G E S PVI++ E +K ++L I N Sbjct: 87 LDPWEYYWVGFSGSDAGLILEATDFSNES-PVISSCSYGEKVK---DQLYQIYEARGNEF 142 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 +++ A A L I A + + + ++ + Y+ +++ IT++ ++ Sbjct: 143 ANAV--AMAGQLYITLSLFLSGASNHNKKHHQNLDYVQKGITYMESHFSYPITIDDVAAY 200 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S S++ EF SP Y+ + R+ + L NT+LS I+ VGY+N +++K Sbjct: 201 VGISRSHLFREFKAHLGKSPKEYLSEYRIKYSCTLLKNTDLSIGAIATSVGYDNGLYYSK 260 Query: 266 LFLRHVGCSPSDYRRQF 282 +F G PS YR Sbjct: 261 VFQSVKGMPPSKYRNLH 277 >UniRef50_C7GFI0 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C7GFI0_9FIRM Length = 291 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 4/273 (1%) Query: 23 SRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVA 82 + W+S H H +EL YV G F I++ ADD+++I H Sbjct: 22 YISISKYEGDWQSHPHTHQ-FSELFYVISGKGVFYIENDTVSVCADDLIIINPHIEHTEK 80 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSK 142 + NDP T + G F +N P G K + K Sbjct: 81 TMSNDPMTYIVFGVEGLAFYFNSQNA-ANPKGYSYYNYGSAKTHFINFSQIMIKEFNARK 139 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 + L + E + I K+ + Y++ NY + ITL+ L Sbjct: 140 PGFEAICHGLLQVLLVYITREQHLSVISDTTLQISKECFV--AKKYIDANYAKNITLDLL 197 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 ++ + Y+ H FT+ SPINY+++ R+ +K L ++ S AE++ G+ + + Sbjct: 198 AEITHINKFYLSHSFTEYVGTSPINYLMETRLAASKELLLSSSRSIAEVASSTGFSSQSY 257 Query: 263 FAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEF 295 F+++F ++ G SP YR+ + + S + Sbjct: 258 FSQIFRKNTGMSPLQYRKLKQTDSKTMQDDSYY 290 >UniRef50_A6LYY5 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYY5_CLOB8 Length = 297 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 105/293 (35%), Gaps = 13/293 (4%) Query: 1 MYQRCFDNASETLFVAGKTPRLSR---FAFSDDPKWESGHHVHDNETELIYVKKGVARFT 57 M + N + + R SD P + +H H + E I + G ++ Sbjct: 1 MLKMTLLNDNSEVVSYNFADFPIRAKKSLLSDYPTMAAANHWHTD-WEFILLLNGKMSYS 59 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA--EENQLLQP--- 112 ++ Y + I ++H S + + P Sbjct: 60 VNGKSYELQEGQAIFINSEQMHYGYSADGSDCNFICILFPPSLISSITRIKETYILPVCE 119 Query: 113 -HSCPVIAAGQGKEVIKTLFNEL---SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNA 168 S P + L L + + K+ + F LY + Sbjct: 120 DTSNPFFILHPEITWQRNLIELLKNVYELCNEEKDGFELHVMSLFNTICFSLYNNIKDSI 179 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 E KK + ++ Y+ NY+++ITL +++ S C F +P++Y Sbjct: 180 SIQETADDKKLEAMHNMTGYIQKNYQKRITLNEIAAAGNVCRSSCCDIFKLILNKTPVSY 239 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 + + R+ ++ L + LS EI+ + G+ +F ++F + +GC+PS YRR+ Sbjct: 240 LTEYRLEKSIELLKISSLSVTEIALQCGFTGSSYFTEIFHKTLGCTPSQYRRK 292 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 213 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 106/279 (37%), Gaps = 16/279 (5%) Query: 15 VAGKTPRLSRFA--FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 G + P++ H H NE E+IYV+ G +D + A + Sbjct: 11 EHGTREFPYACYRVTENFPRYNMIPHWH-NECEIIYVRSGYFELFLDGHTHRIDAGCCSL 69 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA--------AGQGK 124 I G +H D + +Q+ H P+I Sbjct: 70 IIGGSMHGGTP--KDNCRYDCLVFD--MAALLKSSQICTLHLQPIINHERRFITFFSADS 125 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 E K + +L + + + I+ + + + IKK K+ Sbjct: 126 EPAKDAKAVIDAMLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKN 185 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ Y+ NYR+ ITLE+L+ + + +Y C F + +P+ Y+ R+ A + +T Sbjct: 186 VISYIEQNYRKNITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIAST 245 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY-RRQF 282 + +I+ + G+ + +F K+F G +P DY RR F Sbjct: 246 DEKLIDIAMKCGFNDYSYFIKVFKSMKGVTPRDYCRRSF 284 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 109/278 (39%), Gaps = 5/278 (1%) Query: 9 ASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 ++ + L P + G V+D + V +G FT Y A Sbjct: 10 SNPVITYNEHMNVLFAGESQTKPSHQRGPKVYD-FYLMHTVLEGKGEFTCGGKSYPLQAG 68 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIK 128 D +IE L + S+ ++P A G Q + +A + Sbjct: 69 DTFLIEPEALVSYISNADEPWLYRWVAFNGPQAAELAQAAGFS--VANPVAETAAIRRVG 126 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY-ENFKNAYRSEQGYIKKDVLIKDILF 187 L+N + I ++ + LA + D LI+ ++ Sbjct: 127 VLYNHIFSIFRKNDPAAHLKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIH 186 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE-L 246 YL+ Y + +++EQ+++ F + +Y+ F + SPI ++++ R+ +A+ + E L Sbjct: 187 YLSTQYAQPVSIEQMAESFGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGL 246 Query: 247 SQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + +I+ VG ++ +F+K F R G SPS YR + Sbjct: 247 TIEQIAASVGLQDSLYFSKQFRRFYGLSPSAYRESMRQ 284 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 10/257 (3%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVN--DPATTCT 93 G H HD E+ Y+ G + I +Y A D+V+I LH + P Sbjct: 29 GEHFHDA-WEIYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQPHERIL 87 Query: 94 CALY----GFQFQGAEENQLLQPHSCPVIAAG-QGKEVIKTLFNELSVILPQSKNSQTSS 148 G EE PV+ + +++++ L + Q Sbjct: 88 VNFRTEVVSALLPGREEELEQLFAKYPVLRLSAEEQQLVQQLLARMLAEQKQQAGGYEEY 147 Query: 149 LWDAFAYTLAILYYE-NFKNAYRSEQGYIKKDVL-IKDILFYLNNNYREKITLEQLSKKF 206 A L L N + + E+G K+ I ++ Y+N +Y E ++L L+ +F Sbjct: 148 CQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHYDENLSLSDLANRF 207 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S Y+ H F + ++ + Y+ + R+ EA L TEL EI++RVGY++ HF ++ Sbjct: 208 HLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAYRVGYQSGTHFGRV 267 Query: 267 FLRHVGCSPSDYRRQFK 283 F + SP YRR+ + Sbjct: 268 FKKAKAVSPQSYRREQR 284 >UniRef50_C3RN82 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RN82_9MOLU Length = 267 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 6/253 (2%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G V N L Y G + +++ +Y A D +I + +D ++P T Sbjct: 6 PNYSYGPAVRPNYL-LHYCLSGQGEYHVNNQVYQIKAGDAFLIMPNVVTYYQADQHEPWT 64 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 + G + Q L+ + + I L IL +K S ++ L+ Sbjct: 65 YLWISFDGSK-----TRQYLKRCNLDEHNLVVHCDYINELRETTIAILAHNKLSYSNELF 119 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 + N ++ + + + Y+ NNY+E +T+ +++ + Sbjct: 120 IQGQLYTFFSFLAKSANITYNDNVAPNYNPYVDKAIEYIQNNYQEMVTVNEIADYLSLNR 179 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 SY+ F K +SP ++++ RM A+ LTNT+L+ +I++ GY N F+K F Sbjct: 180 SYLTTLFKKHLHLSPQEFLLKYRMMRAEDLLTNTDLTINQIAFSCGYSNQLSFSKAFSNS 239 Query: 271 VGCSPSDYRRQFK 283 +P DYR+QFK Sbjct: 240 HQMAPRDYRKQFK 252 >UniRef50_A6LYV7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYV7_CLOB8 Length = 303 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 51/293 (17%), Positives = 112/293 (38%), Gaps = 15/293 (5%) Query: 4 RCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTIDS 60 ++ + G +E G H H E + Y I+ Sbjct: 9 IEVNDNLQETVKHGSHDFPLAIYTDKFNLFEDGYIRWHWH-KEVQFSYSLYDKVVVFIED 67 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 + + ++I LH + N + G+EE+ + + + P+I + Sbjct: 68 EEIILSPGEGIMINSNVLHQIKPYKNIDCMMFSIDFDSTLIGGSEESLIEKKYLSPIIES 127 Query: 121 GQGK-----------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAY 169 K + I + ++ ++ + + + + L E ++ Sbjct: 128 NNLKFISLKPDVPWQKRILSHLEQVFILSHEKSYGYELEMKNYLSIVWLNLIKEIKEDIK 187 Query: 170 RSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYV 229 S D +K + Y+ +Y + I L+ +++ S S C F + +++P Y+ Sbjct: 188 ISMPSASNDDERVKMAMQYIQKHYADNIDLDSIARAANISKSECCRSFKRILKVTPFEYL 247 Query: 230 IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++ R+++A L + S + IS VG+ + +F K+F ++ CSPS+YR ++ Sbjct: 248 MEYRVSKAAELLLKNKDSISNISLDVGFNGISYFGKVFKKYRNCSPSEYRTKY 300 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 138/287 (48%), Gaps = 7/287 (2%) Query: 5 CFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYV 64 D + PRL+ F + H H+N EL ++ G + + + Sbjct: 4 SIDIDQQEASPFELEPRLTGFYHWNRSIRTM--HQHENCIELNFMISGNGTHIVGNEICH 61 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGK 124 DI++ + +H + ++ C A+ G + GA N LL P P I Sbjct: 62 TQPGDIIIYDSKVMHDESLMLDSLTDACCIAVTGLKRPGARPNALLPPGLHPCIPCQSIA 121 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 + + TL++ + L + + +A A T+ L ++ + + R+ + ++++L++ Sbjct: 122 QELCTLYHIIERSLAKPHGYPAA---NAAAQTIVHLVWQ--QISERAVRAAGQENMLMER 176 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 + Y+ +Y E +++ ++++F AS YI H F +P+ Y+ + R+ +A+ L +T Sbjct: 177 VRSYIEQHYAEALSIRDIAQEFHASRDYIAHAFKHTTNYAPLQYLRRWRIGKAQTLLIDT 236 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEI 291 +LS E++ RVG+++ ++F+++F + +G P +RR ++ +Q+ Sbjct: 237 DLSLTEVASRVGFDDPNYFSRVFRQVIGMPPGTFRRTWRAAQRKQQR 283 >UniRef50_C9KMM0 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM0_9FIRM Length = 248 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 7/254 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H++ E+I V G F ID+ Y+A D++ + G LH + D AT + Sbjct: 1 MHQHEDRAEIILVTGGRGSFNIDTGHYLASPGDVLFFDSGILHDETTIDGDLAT-SCLGV 59 Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYT 156 FQ G N+++ P ++ + ++TLF+ + Sbjct: 60 SDFQLPGRRANEMVGRLYAPQLSLDAQFDAVRTLFHTAVQLALAGDAPCVLDQLTC---- 115 Query: 157 LAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 AIL + + A + +++ L + Y++ +YRE ITL+ ++ + + Y+ H Sbjct: 116 -AILCKLDEELARHGQPPRPQQESLGLTVKAYIDAHYRESITLQSIAAELNFNPYYLAHA 174 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 F + SP+ Y+I+RR+ EA+ L T+ S EI++ GY N ++F +F R VG +P Sbjct: 175 FREHIGYSPMQYIIRRRIGEAQNLLIGTDRSITEIAFSCGYNNSNYFQSVFKRLVGMTPG 234 Query: 277 DYRRQF-KNCFAEQ 289 YRR + +N + Sbjct: 235 QYRRDWVQNALPQT 248 >UniRef50_C8WV57 Transcriptional regulator, AraC family n=2 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius RepID=C8WV57_ALIAD Length = 300 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 13/258 (5%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H H +E E I V +G + S +V + ++ G LH++AS P+ Sbjct: 35 VNLHWH-SEAEFIVVTRGSVCLQVGSQRHVLADGGVALLSGGELHSMASPGKGPSECKAI 93 Query: 95 ALYGFQFQGAEENQLLQPHSCP-----------VIAAGQGKEVIKTLFNELSVILPQSKN 143 +G +++ Q + P + + + E++ L + Sbjct: 94 VFGLDLLEGPSGDRVQQSYLSPLASGKLRLPGAIAHDHPVRPHLAARLCEIAEALEEQPV 153 Query: 144 SQTSSLWDAFAYTLAILYY-ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 ++ LA L+ + + ++ +K +L Y++ + +K+ L L Sbjct: 154 GYELAVKGCLYDVLAQLFRAKLLVEDSPRREMDDRRADTLKAVLTYIDEHLSDKLRLADL 213 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 ++ S + C F + P+ YV +RR+ A L + S I +G+ +V + Sbjct: 214 ARVANMSEGHFCRFFKEMTHRKPMQYVNERRVARAADLLKDPNRSITAIGMDLGFHDVSY 273 Query: 263 FAKLFLRHVGCSPSDYRR 280 F K+F + C+P YR+ Sbjct: 274 FIKVFRSYKHCTPLAYRK 291 >UniRef50_C5RE92 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C5RE92_CLOCL Length = 286 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 96/277 (34%), Gaps = 13/277 (4%) Query: 15 VAGKTPRLSRFAFSD--DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 G F P++ +H H E E+I + G T++ + D+ Sbjct: 11 QHGTFDFPIAFYHVSPSHPRYNMPYHWH-TEYEIIRIISGEFLLTLNGNELKLKTGDLAF 69 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQ------GAEENQLLQPHSCPVIAAGQGKEV 126 I G LH + ++ Sbjct: 70 IHAGILHGGTPI---DCVYECIVFDMKSLLKVNSTCSKQIQDIIHNSKVINSLLPTDNLE 126 Query: 127 IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRS-EQGYIKKDVLIKDI 185 ++T+ N L + Q K + + L I+ + + ++ K++ Sbjct: 127 LQTVCNYLFESMAQKKLGYELVTQGSLYHLLGIILEHRLYSTPKEATSKNQQRINQFKNV 186 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 L + Y + +TLE LSK + Y C F + SPI+Y+ R+ + L +T Sbjct: 187 LSLIEQQYPDPLTLEDLSKAAGMTPKYFCRFFRGMTQRSPIDYLNYYRIESSCEQLVSTN 246 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 S EI+ G+ ++ +F K F ++ G +P Y + + Sbjct: 247 ESITEIALNCGFNDISYFIKTFKKYKGVTPKQYLKDY 283 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 113/276 (40%), Gaps = 11/276 (3%) Query: 26 AFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV 85 +P ++G V + +V +G F + + Y +IE SD Sbjct: 24 HSITEPLHKAGPAV-KTFYLIHFVLEGEGDFYVKGAHYHLKKGQGFLIEPDTPATYISDE 82 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 + P G + L + P+ G ++ K +F+ L+ + Sbjct: 83 HHPWRYVWFGFSGRCAHDTLSSIGLTQ-NQPIFTCEDGDKLKKYVFDMLAHNTSGHADHY 141 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 L L+++ NA + + + + + Y+ N+Y + +E+LS Sbjct: 142 --RLMGMLYLALSVI-----ANAQKDKLEAPSGNAYVNHAISYIQNHYSMPMKVEELSDY 194 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 + SY F + +SP+ Y+ R+T+A+ LT +ELS I++ GY++ + F K Sbjct: 195 VGINRSYFSDLFKQYTGMSPVKYLQNFRITKAQHMLTISELSVESIAFSCGYQSAEAFHK 254 Query: 266 LFLRHVGCSPSDYR--RQFKNCFAEQEILSEFPQPV 299 +F + G SP+ YR ++ + +++ + + P + Sbjct: 255 IFRKTTGLSPNAYRLGKRQRTLSSQETMNNNRPDYI 290 >UniRef50_C6D710 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D710_PAESJ Length = 289 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 7/255 (2%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H + E Y+ G +F I S+Y + D++++ +H + Sbjct: 36 HYHRS-YEFFYLYSGERKFFIRDSVYQIQSGDLILVNTNDVHRTSELSQPNHERIVLHYD 94 Query: 98 GFQFQGA---EENQLLQPHS--CPVIAAG-QGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 F G E LL P + P+I Q + ++ LF L L + + + Sbjct: 95 LPFFDGLSREETELLLSPFASAHPIIKLNLQERMHLEALFESLLRELQECPPGYQLHVRN 154 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 L K + DI+ ++N ++RE + L++L+K+F S Sbjct: 155 MATEILLFTARHALKRKSLPSIELTPVQQKVTDIIRHINQHFREPLPLDELAKQFFISKG 214 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 ++ F + Y+ R+ EA+ L T+ S +IS R G+EN HF K+F Sbjct: 215 HLSRVFKEVTGFGFSQYINVTRIKEAELLLKETDWSITQISERCGFENFSHFGKVFKELS 274 Query: 272 GCSPSDYRRQFKNCF 286 G SP DYR+ +N Sbjct: 275 GLSPRDYRKLEQNQK 289 >UniRef50_C3RLG7 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLG7_9MOLU Length = 280 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 7/284 (2%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M + + + + L + + W S H H + TEL YV KG F I + Sbjct: 1 MSNERIEFIEKPALINNQARLLYVSSSKYEGDWHSQLHSH-HFTELFYVTKGCGGFKIGA 59 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 + +D V+I +H S +P A+ G F+ E++ Sbjct: 60 DEFNVQENDFVIINPNTMHTEVSRDRNPLEYIVIAIDGISFEIPEDSL----KDYISCNY 115 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 K I N + L + N N ++ I+K++ Sbjct: 116 ANYKNEILFYLNLMVKESQAKNELYDDMCQQLMQVLLINILRLNRINVSLTQGKTIRKEI 175 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 + I Y++ NY ++ITL+ L++K + Y+ HEF + +SPI+Y++QRR+ E+K+ Sbjct: 176 FM--IKNYIDRNYHKEITLDTLAEKTHMNKFYLAHEFKNDVGVSPISYLLQRRIYESKYL 233 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 L +T+LS ++IS +G+ ++ +FA+ F + SP YR+ + Sbjct: 234 LRDTDLSISQISTILGFSSLSYFAQAFKKSTNFSPLQYRKNHQK 277 >UniRef50_C6JC61 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JC61_9FIRM Length = 298 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 54/299 (18%), Positives = 116/299 (38%), Gaps = 16/299 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFT 57 M + D + + L G ++ ++SG H H E E+ V G + Sbjct: 1 MAEIITDGSQKELKKHGSDEFPLLVSYEKLSGYKSGSFLWHWHP-EIEITLVLDGQILYK 59 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 ++ Y A DI++ LHA + + G+ + L + + P Sbjct: 60 VNQCTYHMKAGDILLGNANVLHAGFMEDMKDGKYVSITFLPKIIYGSYGSILRRKYVEPF 119 Query: 118 IA-----------AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 + + EV E+ + + K + + + Sbjct: 120 LHNFSLPAVYIDYSQPWHEVFSEYVREIITLYEEKKEFYELDITGTLQKLWRCMLQNLPE 179 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 N +E ++++ +++I+ YL NY KI ++ ++++ S F + +S Sbjct: 180 NLPYTEHSKLERN-RMREIMDYLEYNYMNKIQMKDIAEEIHLCESECSRLFKRYMNVSLF 238 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 ++ + R+ + L +++ S E++ + G+ + +++AK+F R GCSP YR+Q Sbjct: 239 TFLQEYRVERSLEFLLSSDDSIMEVAQKSGFTDSNYYAKIFSRVKGCSPQKYRKQNTKK 297 >UniRef50_C6IZS2 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IZS2_9BACL Length = 287 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 6/282 (2%) Query: 1 MYQRCFDNA-SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTID 59 M++ + A + L + L P G ++D L +V++G F + Sbjct: 1 MFKETYSAAANPDLIETDELHVLFAGESQTLPDHRLGPKIYD-YFLLHFVEQGKGTFRTE 59 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 S+ Y D +I +L + ASDV +P A G + + P PV Sbjct: 60 SASYELSEGDGFLILPDQLVSYASDVAEPWRYRWIAFTGVKAAELVKRVGFTP-QQPVFR 118 Query: 120 AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD 179 G I + + + KNS +A E A G Sbjct: 119 QGGNSP-IPAMLSSVLQAFQTKKNSSHLLSLGLLHQIMAEA-QETLGMASALPSGESGVQ 176 Query: 180 VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 ++K ++ Y+ + Y +++EQ+ + +Y+ F KE +P+ Y+++ R+ +++ Sbjct: 177 RIVKQMIHYMASQYAHPVSIEQMCASLGYNRAYLSRIFKKETGFTPVTYLLKLRIDKSRQ 236 Query: 240 SLTN-TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L ELS +I+ VG + +F++ F R SPS+YRR Sbjct: 237 LLRERPELSIEQIAASVGLTDPLYFSRQFRRFHNESPSEYRR 278 >UniRef50_Q9KBM0 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KBM0_BACHD Length = 299 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 110/272 (40%), Gaps = 13/272 (4%) Query: 21 RLSRFAFSDDPKWESGHHVH-DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 + + H H +E E IY++ G A F I + + A + + I G LH Sbjct: 17 FPCNVYRVKEVNGQVIIHCHWHHEMEWIYMEAGEAEFQIGTKMTTVRAGEGLFIPSGHLH 76 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV--------IAAGQGKEVIKTLF 131 + P + ++ + + + P I + + Sbjct: 77 GAYPVSDKPFSLYATVVHPDFISSFGYDLIQSRYIDPFKDSERTGPIKLCPTHYWMSDML 136 Query: 132 NEL---SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 L Q + + +A L ++F + G ++ IK +L + Sbjct: 137 TMLQATISQFQQKEEGYELVIKANLLQMMAELV-KHFPRTEEQKTGTPQQIRQIKKVLQF 195 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 ++ +Y EK+T++QL+ + S + F R++ + Y+ +R+ +A L T+ + Sbjct: 196 IDEHYDEKLTIKQLANLVQMSEGHFSRFFKSIVRMTAVEYIHTQRLNKAARLLRETDRTI 255 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +IS VG+++ +F KLF RH C+PS++RR Sbjct: 256 MDISMSVGFDHPSYFIKLFKRHKRCTPSEFRR 287 >UniRef50_A5KPF1 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPF1_9FIRM Length = 260 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 8/264 (3%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 L + WES H H +EL YV G F ++ + ++++I Sbjct: 3 YRLLYSSYSKYEQDWESYPHTH-YFSELFYVLNGCGSFIVEEESFPIRKQNLIIINPSIR 61 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVIL 138 H SD N P + G F + + L I E + F+ + + Sbjct: 62 HTEVSDKNSPLEYIVLGVEGLNFLIYNDKEYLN------IQCEDFSENLDFYFHTILREM 115 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 + K S + + L I + + K ++++N+RE IT Sbjct: 116 DEQKESYET-ICQNLLEALIIQLSRHTGSPVEMLPSSKKITRECSYAKRFIDSNFRENIT 174 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L+ L++ + Y H FT+ Y I+P+NY+ Q+R+ ++ LT+T+L+QA I+ + G+ Sbjct: 175 LDTLAELTHLNKYYFAHTFTEIYGIAPMNYLAQKRIFTSQELLTSTDLNQAAIAKQCGFS 234 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQF 282 + +F++ F + G +P+ YR+QF Sbjct: 235 SSSYFSQCFRKICGMTPTAYRKQF 258 >UniRef50_C6J8U5 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8U5_9FIRM Length = 279 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 113/286 (39%), Gaps = 10/286 (3%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M + F S A L+ + + W S H H TEL YV+ G F I+ Sbjct: 1 MSSQSF-RFSPEHPTAQNITLLNTSSSRYEGDWPSIPHSH-AFTELFYVRDGQGDFLIED 58 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 ++ DD+V+I H S + P + T + G F + Sbjct: 59 QIFPISKDDLVIINPHINHTEISKGSPPLSYFTVGVDGLCFS------FNGHKEYRIFNC 112 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 + K + FN L L + + + IL ++ Sbjct: 113 REKKTDLLFYFNSLFQELDRQSEGYETICSHML--DILILQLRRITDSPFELITAQHPSK 170 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 I YL++NY E ITL+ LS+ + Y+ HEFTK Y ISPINY+ ++R+ K Sbjct: 171 ECAHIKRYLDSNYGENITLDHLSELSHLNKYYLSHEFTKYYGISPINYLNRKRIEVCKEL 230 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCF 286 L NT+ ++I+ G+ + + ++ F + G + YR+ K Sbjct: 231 LENTDYGISDIAHLTGFSSQSYLSQSFRKSCGMTAGTYRKLKKKRK 276 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 104/262 (39%), Gaps = 14/262 (5%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H NE ELI +KKG ++ Y +A D+V + G+LH+++ Sbjct: 35 SVNLHWH-NEVELIVIKKGQGLVNVNLVTYTVNAGDVVFVFPGQLHSISQKDYSIMEYEN 93 Query: 94 CALYGFQFQGAEENQLLQPHSCPVIAAGQG-----------KEVIKTLFNELSVILPQSK 142 + + + P+++ + + +L NE+ + + Sbjct: 94 ILFKSSLLKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRP 153 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 + ++ +L N + K IK IL Y+ ++++ I++E++ Sbjct: 154 YAYQLAVKSYLFQIFYLLISNCGLNQIKPI--SKKALEKIKTILSYVAEHFQDNISIEEI 211 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 + S SY F + +S + Y+ R+ A LT T I+ G++N+ + Sbjct: 212 AGHCFYSKSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSY 271 Query: 263 FAKLFLRHVGCSPSDYRRQFKN 284 F + F + G +P YR+ ++ Sbjct: 272 FNRCFKKKYGITPGKYRKDARD 293 >UniRef50_C0BFD5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0BFD5_9FIRM Length = 305 Score = 209 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 7/266 (2%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P G N L YV KG + + + Y +IE L +D DP + Sbjct: 29 PLHSYGPAARPNYI-LHYVMKGKGIYQVGETKYPLKEGQAFLIEPESLTFYQADKTDPWS 87 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 G + Q + L G+E+ + +F L ++N L Sbjct: 88 YLWVGFGGTEAQRFVRDLGLNSRQL-TCECEYGEELKEIVFEMLHHTCSTAENLY--YLQ 144 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 ++L Y K+ + +++ + Y+ N Y +KIT+E ++ + Sbjct: 145 GKLYQFFSVLARGIEIQQYS---NDTKESIHVQEAIAYIKNYYSQKITVEDIANYLALNR 201 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 SY+ F ISP ++ + R++ K L T+LS EI+ GY N F K+F + Sbjct: 202 SYLYTIFMNSLGISPKEFLTEFRISRGKEQLALTDLSVEEIAVSCGYRNSLAFGKVFKQK 261 Query: 271 VGCSPSDYRRQFKNCFAEQEILSEFP 296 +G +P+ YR + E+ I ++ Sbjct: 262 MGMTPTQYRNDNRKAARERLISAQNE 287 >UniRef50_B0M9M5 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M9M5_9FIRM Length = 315 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 54/303 (17%), Positives = 108/303 (35%), Gaps = 20/303 (6%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWE--SGHHVHDNETELIYVKKGVARFTIDS 60 + F ++TL + + + S + H H E E + +G + Sbjct: 14 DQNFRELNQTL---DQRFPIWASSDSFFRYYNRYFRCHWHP-EIEFSVITEGECIYEAGD 69 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 +Y D + I + LH F G+ E+ + + PVI Sbjct: 70 RVYELKKGDGIFINQNVLHMAEMKGKLECRFGVVRAEAFFLGGSTESLIYRKFMEPVINN 129 Query: 121 GQG-----------KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAY 169 + ++ + EL I + + F+ L + + + Sbjct: 130 PEISCVPFYGDIPWQKRLMRQLAELIRIYEERPEGFELMMTSGFS-LLWLEFVKALGEEK 188 Query: 170 RSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYV 229 + K I+ + Y+ NY +KITL+ +++ ++ S C F + SPI YV Sbjct: 189 GNAVSINKDAERIRKGISYIQRNYTKKITLKDIAEICQSCQSECCRMFRNVVKESPIEYV 248 Query: 230 IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR--RQFKNCFA 287 R+ + + S EI+ + G+ +F ++F + +GC+PS Y+ ++ Sbjct: 249 NTYRIRRSLILIEEGTYSMTEIAQKTGFSGSSYFTEVFKKKMGCTPSKYKGSKEIYKRVK 308 Query: 288 EQE 290 Sbjct: 309 NNH 311 >UniRef50_A5ZWD2 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWD2_9FIRM Length = 298 Score = 209 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 109/291 (37%), Gaps = 15/291 (5%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKW---ESGHHVHDNETELIYVKKGVARFTI 58 D+A L G D + H H N+ E+ +++G A F + Sbjct: 4 RTILVDSARRELEKHGTENFPMTVNHDDLWSFEGKNVPIHWH-NDLEINLIREGEAVFQV 62 Query: 59 DSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQ--------LL 110 Y + ++ R H+ +S N+ T + G + L Sbjct: 63 YQKSYRVRTGEGFLLNRNVPHSCSSPGNEHVRYSTILVRPDFLYGDFGSDVERKCFQPFL 122 Query: 111 QPHSCPVIAAGQGKEVIKTLFNELS---VILPQSKNSQTSSLWDAFAYTLAILYYENFKN 167 Q + P I E K + +L+ + + + A++ Y + + Sbjct: 123 QNSAIPCIYLTGFDENGKEILQKLNQVEEAFDRKRFCYELKIKGLLCEAFAMILYGHRQE 182 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 + +++ ++ +L YLN ++ E I+L+ L+ + S C F K + Sbjct: 183 LTKFVPANLQELERLEKMLNYLNMHFTEVISLQDLADQVHLSREVCCRLFKKMTGKTITG 242 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 Y+ + R+ ++ + + + S +I+ VG+ N FA F + GC+P +Y Sbjct: 243 YLEEYRVNKSFSLVQSGQYSMTQITEMVGFSNPSRFASAFRKRFGCNPGEY 293 >UniRef50_UPI0001C35241 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35241 Length = 275 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 12/266 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 + H H+ E E+ +K G + ID + D+++I LH+ Sbjct: 3 NSYRNLSLHWHE-EMEITLIKSGTIYYDIDFETFSVEKGDLLLISPHILHSAHEMPGKSM 61 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAG-----------QGKEVIKTLFNELSVIL 138 + + + + PV + G E +K F L Sbjct: 62 VSDSLVFHLDFLGYQVPDACTIKFLNPVQSGKLRFLPVVKPGAAGYEEMKECFISLLECF 121 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKIT 198 + + +LY + G + +K++L Y+ +NYRE +T Sbjct: 122 NGKQYGYELYTKELLMRLFRLLYQYGCVAKHEGTHGEFGAEEKLKEVLSYIQSNYRETLT 181 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 +E+LS S ++ + F + ++ + Y+ R+T A L TE +I+ G+ Sbjct: 182 IEELSSVCHFSQTHFMNFFKRYAGMTCMEYINHYRITRAAADLVETERQVMDIAMENGFR 241 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQFKN 284 N+ +F K+F G +P YR+ + Sbjct: 242 NISYFNKVFKERFGVTPGSYRKNSRE 267 >UniRef50_C6D359 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6D359_PAESJ Length = 309 Score = 209 bits (533), Expect = 8e-53, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 14/260 (5%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA 95 H H++ E+I +++G A F IDS Y AH D++ + G LH S + Sbjct: 38 YLHWHEHF-EIIVMQQGSAVFHIDSESYEAHPGDVLFVPAGALHVGYSLCEGDLSYLAIV 96 Query: 96 LYGFQFQGAEENQLLQPHSCPVI-----------AAGQGKEVIKTLFNELSVILPQSKNS 144 FQ ++ L + P + L + + + + Sbjct: 97 YNSSLFQNWMQDSLHTKYVLPYLEGRVQLPVKPTRLDPSCADYYYLLEQANSEFKAKQPA 156 Query: 145 QTSSLWDAFAYTLAILYYENFKNAYRSE--QGYIKKDVLIKDILFYLNNNYREKITLEQL 202 + L +L + + + Y+ K ++ Y+ N+ +K T+ Sbjct: 157 YQLMVKSQLHMLLTLLSRKFLPHQLPEQATNQYVHNREQFKALIEYIEANFADKQTVADA 216 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 +++ +V + C F K + I+YV R+ EA+ L +LS EI+ VG +N ++ Sbjct: 217 ARRMNLNVHHFCKMFKKLTGRTFIDYVNVCRVNEAERLLLAGDLSITEIAGCVGCDNSNY 276 Query: 263 FAKLFLRHVGCSPSDYRRQF 282 F K++ ++ G +PS R+Q Sbjct: 277 FTKMYKKYKGVAPSQLRKQL 296 >UniRef50_B0MDV1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDV1_9FIRM Length = 290 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 98/291 (33%), Positives = 165/291 (56%), Gaps = 6/291 (2%) Query: 1 MYQRCF-DNASETLFVAGKTPRLSRFAFSDD-PKWESGHHVHDNETELIYVKKGVARFTI 58 M+ + + +F +P++ R + S + P W +H+H NETEL+Y+ KG + I Sbjct: 1 MFLEEYREKVRRPIFEPDHSPKICRLSHSYNNPTWNYQYHLHKNETELVYISKGSGTYVI 60 Query: 59 DSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHS-CPV 117 +++ Y I+++E+G +H++ SD +DP TCA+ ++ ++ + P + CP Sbjct: 61 NTNSYQLKKGMILIVEQGAIHSLFSDEHDPLNCWTCAISDYKLCCRSDHGFMLPANVCPA 120 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 + +G + I LF EL +L + + + DA A +LA +Y+E F ++E+ Sbjct: 121 MDSGIHENYIHRLFEEL-DLLRKFSSDTHMAACDALAVSLASIYFELFLADPKTERHKDS 179 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 DIL Y+N NY +ITL++L+++F S +I HEF+K Y ISPINYVI RR+ EA Sbjct: 180 SFAR--DILIYINENYASQITLKKLAEQFHISTDHISHEFSKVYGISPINYVIDRRLNEA 237 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 KW L NT S I+ ++GYEN +HF+KLF + + P +R +++ + Sbjct: 238 KWMLINTSDSLVSIAKKIGYENTNHFSKLFQKRMQYPPLKFRELYQHKKST 288 >UniRef50_C8NIW5 AraC family transcriptional regulator n=2 Tax=Granulicatella RepID=C8NIW5_9LACT Length = 282 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 100/258 (38%), Gaps = 6/258 (2%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 D W S H H TEL YV G F I + A+D V+I H S + Sbjct: 27 KYDSDWHSTLHTHP-FTELFYVIDGKGEFIIQHQRFPVKANDFVIINPQVEHTEVSSPDS 85 Query: 88 PATTCTCALYGFQFQGA-EENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 P + G F +Q P S ++ I N + S Sbjct: 86 PLEYIVVGIQGLSFSNLTPVDQGGHPFS--FFNLRDEQKDILRYLNAMVQEATNQALSYD 143 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 + L + + KD I I YL YRE I LE L+ Sbjct: 144 LVCHNLLEILLIKILRHQHFDLEVGSHSKTTKD--IAFIKHYLKTYYRESIQLEALASMT 201 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S YI H F KE +SP+ Y++ R+ E+K L T S ++++ VG+ +F+K Sbjct: 202 HLSRFYISHSFKKEVGMSPMEYLMTIRIKESKILLRTTNYSISQVADIVGFTTPTYFSKQ 261 Query: 267 FLRHVGCSPSDYRRQFKN 284 F + G SP+DYR +++ Sbjct: 262 FRKITGISPTDYREKYQK 279 >UniRef50_A9KIW0 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIW0_CLOPH Length = 300 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 10/256 (3%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 W+S H H N E Y+ G +F+++ + A+D++++ +H S+ + Sbjct: 51 KYGTDWKSLPHSH-NFAEFFYITNGSGQFSVEKEILDVKANDLIILNPTIVHTEISNPSK 109 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 P + G +FQ ++ +L + + K + FN L+ + + + Sbjct: 110 PMEYIVLGIEGIKFQAEDQGYIL-------LNSSAHKSDLHLYFNSLAHEMKSEQPYRNF 162 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + ++ + + ++ I Y+ NY+E IT+E LS Sbjct: 163 VCQNLLNIIFTMILRNDAFKISIVSGPKLTRECNI--AKKYIEENYQENITIETLSSLVH 220 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + Y H F K++ SPINY+I+RR+ E+ L +T S + IS VG+ + +F++ F Sbjct: 221 LNKYYFVHNFKKQFGTSPINYLIKRRIEESMHLLVSTNHSLSSISQIVGFSSPSYFSQAF 280 Query: 268 LRHVGCSPSDYRRQFK 283 R +P +Y++ +K Sbjct: 281 KRMTNITPQEYKKMYK 296 >UniRef50_C6JFK6 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFK6_9FIRM Length = 283 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 108/285 (37%), Gaps = 15/285 (5%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGH-HVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + G + + S + H HD E ELIY++ G ++ + A Sbjct: 1 MKERSSHGSFELPIETYTDNCEIFHSLYNHWHD-EMELIYIESGSGLVRLNKEILRVKAG 59 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQP-----------HSCPV 117 D++++ RG LH + +D+ + + G + + + + Sbjct: 60 DLIIVNRGVLHGIKTDLKNILYFRSIVFDLNFLSGPAGDLCQERVISLLMDNQAEFTHII 119 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 + I LF+ + + K L F + N+ ++ K Sbjct: 120 SRSDDNYGNICLLFDRIHSCHKEKKPYYFVKLKALFFSFFYEMLMGNYITPADKDEN--K 177 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 IK IL Y+N NY + +T +L+ S Y F + + I Y+ R+ +A Sbjct: 178 SLASIKKILDYINLNYSQPLTAAELTALSNYSEYYFMKLFKQYTGKTLIAYINDLRIEKA 237 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 K L +++ S EI+ VG+ N +F K F + G SP +RR Sbjct: 238 KPMLLHSDSSVTEIALEVGFNNTSYFIKKFQQATGMSPHKFRRNL 282 >UniRef50_D2LQR6 Transcriptional regulator, AraC family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQR6_BACS4 Length = 302 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 8/287 (2%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 E L L + + S + NE L YV KG D Y +D Sbjct: 15 EYLKKNSYDLYLCYCGLEECDPYHSYGPISRNEYLLHYVIKGKGILKADGKTYHIGENDA 74 Query: 71 VVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL 130 +I + +D +DP T G + + N + E +TL Sbjct: 75 FLIYPSEITYYEADKDDPWTYIWIGFDGMKAESCLINASFSKENR-----VSKFECGETL 129 Query: 131 FNELSVILPQSKNSQTSSLW---DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILF 187 + L+ +L SK + ++ L + + A++ + N+ + E V ++ L Sbjct: 130 VHYLNGMLSASKLTYSNDLKREGYLYMFLSALIQEKTDNNSDKPEVYDYPFLVYVEHALD 189 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 ++++NY ++I + +++ + SY+ F K ++SP Y+++ R+ +A L NT+L Sbjct: 190 FISHNYEKQIKVIDIAEYIGINRSYLTTIFKKSLKVSPQEYLVKYRLDKACTLLKNTDLL 249 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSE 294 EI+ VGY N F+K+F + SP YR Q + + + Sbjct: 250 VNEIARNVGYNNALTFSKVFKNYYKMSPKTYRTQHQELVYSNKKHQK 296 >UniRef50_UPI0001692C08 transcriptional regulator (AraC/XylS family) protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692C08 Length = 288 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 3/249 (1%) Query: 42 NETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQF 101 + + +V G F A D +IE L +D +P A G Sbjct: 42 DYYLMHHVISGKGIFMYRGKELELKAGDTFLIEPEELVRYEADQVNPWMYRWVAFQGKGV 101 Query: 102 QGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILY 161 A E C V + + + LF+ + +L K L Sbjct: 102 PEALEKTGFSSSRCIVHT--RDNQNVSELFSTILSVLQDKKEGAHQKALGYLYVLFGELC 159 Query: 162 YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEY 221 + + + ++ + YL+ Y E I++E ++ + +Y+ F +E Sbjct: 160 EAIYPKTGIGMRTSSESGRTVQKAIHYLSTQYAEDISIETMADNLGYNRAYLSRIFKQET 219 Query: 222 RISPINYVIQRRMTEAKWSLTNT-ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ++P+ ++++ R+ +A++ L EL+ +I+ VG+ + +F+K F R C+P++YR Sbjct: 220 GLTPVTFLLKLRIDKARFLLRQRMELTIEQIASSVGFHDPLYFSKQFKRFYKCAPTEYRD 279 Query: 281 QFKNCFAEQ 289 K+ E Sbjct: 280 SIKHIRKEN 288 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 103/290 (35%), Gaps = 17/290 (5%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKW-ESGHHVHDNETELIYVKKGVARFTIDS 60 ++ ++ ET + + + + H H + E+I+VKKG R Sbjct: 84 RKKELESFQETKKHGSTMFPFNIYPCTIPGDFPSVALHWHKS-MEIIFVKKGTGRIQTGR 142 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA- 119 ++ A + DI V+ G LHA+ + G + + + P+ + Sbjct: 143 NMQEARSGDIFVMPPGTLHAIYAAAGYNMEYENIIFEVEFLGGGAADVCDKEYLVPLASG 202 Query: 120 ----------AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAY 169 G + I + + + A L L Sbjct: 203 QLLQPAVFSPVDAGYKQISACLRRAEELCSARERGYELGVKAALLELLLYLLRMC----P 258 Query: 170 RSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYV 229 + + +K +L + +Y + +T+ ++ S S+ F + SP+ Y+ Sbjct: 259 EAPERDTPDMERLKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYL 318 Query: 230 IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 +RR+ A +L T+ I+ G+EN+ +F + F + G +P YR Sbjct: 319 NERRLAAAAENLRETDDKILVIAENAGFENLSNFNRQFKKRYGVTPRAYR 368 >UniRef50_A6VUH3 Cupin 2 conserved barrel domain protein n=2 Tax=Marinomonas RepID=A6VUH3_MARMS Length = 316 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 114/309 (36%), Gaps = 15/309 (4%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKW---ESGHHVHDNETELIYVKKGVARFT 57 +Y+ + L G + E H HD E E++ V +G + Sbjct: 3 IYKIETEENGRELTTHGSHDFPCESYDEHFSHFVGGEVPWHWHD-EIEVVLVIEGATKVE 61 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 +S + ++V I LH + + + G + + H PV Sbjct: 62 CINSSDIVKTGEMVFINANTLHKLTNYGTEDCRILNVVFSPKMLGGMGFGLIYKKHVLPV 121 Query: 118 IAAGQG--------KEVIKTLFNELSVILP--QSKNSQTSSLWDAFAYTLAILYYENFKN 167 I + K + NEL+ + + S + ++ N ++ Sbjct: 122 INNKELLFYKFSGAKAWHEQAINELAAAFNVWKEQGSDREFYMNIALMKFWYIFCTNQQD 181 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 + + I+ +L ++++NY E+I++ +S+ S S F SP + Sbjct: 182 ITATHNTAKANEKRIQSLLNFIHSNYEERISIADISEAANISESECYRIFRNALNCSPNS 241 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 Y++ R+ ++ LT + A+I++ G+ +FAK F +P +R+ + + Sbjct: 242 YLLNYRLRKSVQLLTESNKQIADIAFESGFNCSAYFAKKFKLAFNVTPMQFRKNY-SVTL 300 Query: 288 EQEILSEFP 296 + + + FP Sbjct: 301 DHPLANHFP 309 >UniRef50_C6J7Z0 Helix-turn-helix domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J7Z0_9FIRM Length = 302 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 110/288 (38%), Gaps = 12/288 (4%) Query: 8 NASETLFVAGKTPRLSRFAFSDDPKWES--GHHVHDNETELIYVKKGVARFTIDSSLYVA 65 ++SE + L A + H HD+ E IY+ G R+ ++ + Sbjct: 11 DSSEVVPYDHAGIPLYIRAAHLASYYNMCAPCHWHDD-IEWIYIITGKMRYYVNGKRLIL 69 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG--AEENQLLQPHSCP----VIA 119 + D +++ ++H + + F + + P Sbjct: 70 NEGDSLMVNARQMHYGYAFEQQDCYFLCILFHPSLFGNNQILQEKYFLPFFENTSLEFHH 129 Query: 120 AGQGKE---VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYI 176 E + E+ ++ S + + + L + +A +++ Sbjct: 130 FYSNDEAGVKVGRYLQEVLLLKEDSDSGYELGVISCMLELWSFLIRTDLLSAAKNKSESE 189 Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 ++ + KD++ ++ +Y EKI+L ++ S C F + SP++++ R+ Sbjct: 190 QELNIQKDMVSFIYQHYPEKISLTDIAAAGHVGRSKCCQIFKHYMQQSPVDFLNTYRLKI 249 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + L T+ S EI+ G+ ++ +F+K F+ GC+P +YR ++ Sbjct: 250 SCRLLCTTQKSITEIAILCGFNHLSYFSKYFMECYGCTPREYRTLHEH 297 >UniRef50_A7B0Y7 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0Y7_RUMGN Length = 276 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 9/282 (3%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M R + SE L LS D+ W+S H H + TEL++V G F+ + Sbjct: 1 MSNRHYLINSEDL-QNLNAKLLSIAFSKDEGDWKSIMHTH-HFTELLFVVSGEGSFSFNQ 58 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 D+V+I H S N P + G F ++ + Q V Sbjct: 59 EQSPLRRGDLVIIPPYTEHTERSSQNHPLEYYVLGIDGISFLSQKDRECAQ-----VFCN 113 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 + I LF ++ + ++ + IL + I+ Sbjct: 114 FEHDPSIHELFRQMLYEIRTAQYGSQTICQHLLEI--LILKIIRSQQLIPVSINSIRMTK 171 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 I YL++NY E ITL+ L+ + Y+ H FTK +SPI Y+ Q R+ A+ Sbjct: 172 ECAQIKEYLDSNYAEHITLDTLTGLTHMNKYYMVHSFTKYAGLSPIQYLNQTRLKRAQHL 231 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L NT S ++I+ G+ + +F ++F ++ +P YR++ Sbjct: 232 LKNTNYSISDIASSTGFSSQSYFTQIFRKNFNMTPVKYRQEH 273 >UniRef50_UPI0001C36B6C helix-turn-helix domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36B6C Length = 303 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 109/288 (37%), Gaps = 21/288 (7%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 +D L++ S P ++ H HD+ E I + G + I+ V Sbjct: 22 YDETGIPLYIQTG-------ELSRYPDRKALCHWHDD-LEFIRIVHGEMNYYINGKNLVL 73 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ--- 122 D +++ ++H +S + + ++ F + Q + P++ + Sbjct: 74 KEHDGIMVNTRQMHYGSSINQNDCSFLCILVHPALFSS--NRLIYQKYLLPLLEDRETEF 131 Query: 123 --------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 I E++ + + + F L + + Sbjct: 132 VYLDSGRPDHGFILDCLMEMTQLKEHGEYGYELEIIGLFYLIWRHLARQFKAGKTAAPGI 191 Query: 175 YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 + KD++ ++ +Y EK+TL ++ S C F K SPI+++ R+ Sbjct: 192 EDMDTKVQKDMVSFIYQHYTEKLTLSAIAASGGVCRSKCCQIFKKYLCQSPIDFLNSYRL 251 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + L T+ S EI+ G+ ++ ++++LF+RH GC+P +R Q Sbjct: 252 EVSSHLLKKTDKSITEIATECGFNHLSYYSELFMRHYGCTPRQFRSQH 299 >UniRef50_C0C2G6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2G6_9CLOT Length = 299 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 105/293 (35%), Gaps = 16/293 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTID 59 + D + L F + G H H E EL+ V +G I Sbjct: 5 KIQTDKEGKELRQPLDGKFPIAAEFQKLSYYAYGLCISHWHP-EMELLVVTEGALEQRIG 63 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPH------ 113 ++ ++ V I +H + + G ++ + + + Sbjct: 64 EETHMIRENEGVFINSHVMHGARMVNREDCSYRVIRFEPALLGGNAKSLIYEKYVKTLQS 123 Query: 114 -----SCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNA 168 V + + L +++ + + + +LY + Sbjct: 124 QKDLLYRIVRPEDIQQRRMIDLIYKITDTYVKREVCYELKVQQMMLELWELLYKR-TGHV 182 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 + ++ I+D L Y+ Y+ +TLE ++ S S C F K +R SP+ Y Sbjct: 183 EENAIQMNRELYKIQDALAYIQMYYKNPMTLEDIAGACMLSKSSCCRLFKKVFRQSPMEY 242 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 V R+ ++ + + S EI++ G+ N +F ++F + +G +P+ Y+++ Sbjct: 243 VTSYRIQQSFMLIADDRYSITEIAYESGFTNSSYFTEMFRKVIGMTPTQYKKE 295 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 91/249 (36%), Gaps = 8/249 (3%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H + E+ Y+ G + I+ +Y D+ +I +H + + A Sbjct: 35 PHYH-SYYEIYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEAERFGIYF 93 Query: 97 Y----GFQFQGAEENQLLQPHSCPVIAAGQG-KEVIKTLFNELSVILPQSKNSQTSSLWD 151 S P + I+ L ++ Q + L Sbjct: 94 SRDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQLCS 153 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 L +L + A R + + + Y+N +Y+E +TL Q++ S + Sbjct: 154 LLHQILVVL--GRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANMSPT 211 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 Y +F + Y+ R+ +A L NT+LS ++ G+ + ++F +F R Sbjct: 212 YFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFRRLT 271 Query: 272 GCSPSDYRR 280 G SP +YR+ Sbjct: 272 GVSPREYRK 280 >UniRef50_A7VU88 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU88_9CLOT Length = 308 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 54/292 (18%), Positives = 101/292 (34%), Gaps = 20/292 (6%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWE--SGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 ET+ + + ++ H HD E EL Y+ G + H Sbjct: 15 ETITYESQMLHYGLYTAGYQRVFQADIPWHWHD-EFELGYISGGSVVYQTSGLTVTLHEG 73 Query: 69 DIVVIERGRLHAVASDVNDPATTCTC---ALYGFQFQGAEENQLLQPHSCPVI------- 118 D + I G LH + +P G+ + L + PV+ Sbjct: 74 DGIFINSGVLHYLHPL--EPCREARLQTQFFDKSFLAGSLGSLLDIKYVAPVLDQRQLEA 131 Query: 119 ----AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY-ENFKNAYRSEQ 173 + + + + + + L + F+ +Y K + Sbjct: 132 VPLYRSDPESKGFLECLQKGVELCSRKEEFFELRLRNLFSELWESIYRWAAQKESSTPSL 191 Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 +D IK ++ Y+ ++ EKI++ ++ S F I+PI Y+I R Sbjct: 192 RRSIEDDRIKQMMRYVQAHFSEKISVSSIAASIPISERECYRLFQNSMGITPIEYLISVR 251 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 + A+ L NT S +I+ G+ + +F K+F H +P+ YR + Sbjct: 252 LQNAQSLLMNTNKSILDIALETGFGSSSYFGKIFRSHHRLTPAQYRNLSRQK 303 >UniRef50_C4IHE3 Msm operon regulatory protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IHE3_CLOBU Length = 285 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 7/260 (2%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 P G + D+ + Y+ +G F ++ LY H + +I + +D + P Sbjct: 31 TPSHSFGPAIRDHFL-IHYIIEGSGTFLVNGKLYKLHKNQGFIIFPDDITYYEADNHTPW 89 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 G + + + L + I + ++ F+ + + K + L Sbjct: 90 IYKWVGFKGIKAEYYLQCAGLTKEN--PIFEYSNDKFLEECFDNMIKA-SKLKYASELKL 146 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 + L+ L + ++ Y KDV IK L Y+ NY K+ + +++ + Sbjct: 147 QGLLSIFLSELIELSSIDSSSD---YYYKDVYIKKCLNYIEMNYSRKLLISEIAALLGLN 203 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 Y F + ++P Y+I R+ +A + N +LS +IS VGY++ F+K+F + Sbjct: 204 TKYFSLIFKESIGVTPQQYIISFRVNKACELMKNFKLSICDISRSVGYDDSLAFSKIFKK 263 Query: 270 HVGCSPSDYRRQFKNCFAEQ 289 G SP YR QF N ++ Sbjct: 264 QKGMSPKKYREQFINSNSKN 283 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 16/275 (5%) Query: 17 GKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERG 76 R+ F+ S D H+HD+ EL Y+ G + I Y A D+V ++R Sbjct: 19 EYDRRIGYFSMSAD-------HLHDH-YELYYLLSGERIYFIKDRSYRVRAGDLVFVDRN 70 Query: 77 RLHAVASDVNDPATTCTCALYGFQFQGA-----EENQLLQPHS--CPVIAAGQG-KEVIK 128 +H + F L +P P++ E ++ Sbjct: 71 AVHKTLDSGRPDHDRLVLYINPELFADLAVPPELAEGLKEPFGWDVPILRLPSPASEAVE 130 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 + ++ + + + L L Y RS + ++ Y Sbjct: 131 RMVGDMVNEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRY 190 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 LN+NYR+ +TL ++++ FR S Y+ F + + +Y+ R+ EA+ L ++ S Sbjct: 191 LNDNYRQALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSI 250 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +I+WR G+ N HF K+F R V SP YR+Q++ Sbjct: 251 TDIAWRSGFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_B1SDU2 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SDU2_9STRE Length = 288 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 113/279 (40%), Gaps = 11/279 (3%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 F+ + L V + + G V DN L ++ G +FTID Sbjct: 21 FNTNNFDLNVDHYGAEICA------KNYSFGPTVRDNYV-LHFIVDGKGKFTIDGITTQL 73 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 D+ ++ +G++ +D P T G + + L H + + Sbjct: 74 KTGDMFILPKGKVAFYQADGEHPWTYLWVGFSGSKAENILSKTQLLDHY--FCHSTLESK 131 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 V+ + L+ Q + T A Y L + F + S+ + ++ IK + Sbjct: 132 VLDQIVK-LTQFRDQKLDDVTELQLTAELYKLLAFLMKEFPSKAMSDSSILIQN-YIKQV 189 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 ++ Y + + +++KK + SY+ F +E S +Y+IQ RM ++ LT T Sbjct: 190 KKIIHTQYGNPLKISEIAKKLNLNRSYLYKIFKEETDYSLKDYLIQIRMEKSADLLTRTT 249 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 +EI+ VG+ + F+K F +H G SPS YR+ K Sbjct: 250 FHISEIANAVGFPDALAFSKAFKKHFGQSPSHYRKALKK 288 >UniRef50_Q2BQ54 Transcriptional regulator, AraC family protein n=2 Tax=Oceanospirillaceae RepID=Q2BQ54_9GAMM Length = 304 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 106/272 (38%), Gaps = 3/272 (1%) Query: 16 AGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 + L + + HD+ LIY G ID + DI++I + Sbjct: 32 SQGLYPLGMGYYRQASGHQMERQEHDDNL-LIYCLDGEGEAVIDGQKTRIRSGDILLIPK 90 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS 135 G H + P T +G + ++ LQ + L ++ Sbjct: 91 GVSHTYQARKRKPWTIYWVHFHGHHAEDFAQH--LQQRESNQRRYVMPIGIHSRLASDFE 148 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 +L +++ + + A L + ++Q + + I+ + + + E Sbjct: 149 ALLEARESTYNLNAYICAANQLRQILSHIALLQPLAKQKQSRGGLDIERVHSLMQTHIHE 208 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 ++ L+ L++ S + ++ + +PIN+ IQ ++ A L T E+++ V Sbjct: 209 QLDLDTLAESISLSKYHFVKKYKEVTGTTPINHFIQLKIERACHLLDTTNNGINEVAFAV 268 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 GYE+ +F+++F + +G SPS YR+ F Sbjct: 269 GYEDAYYFSRIFKKLMGVSPSQYRKMRTGAFP 300 >UniRef50_Q03WL4 Transcriptional regulator, AraC family n=2 Tax=Leuconostoc mesenteroides RepID=Q03WL4_LEUMM Length = 309 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 118/304 (38%), Gaps = 5/304 (1%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M + F+ +E + + S + + + L +V +G + + Sbjct: 1 MEKSLFNIVNEHTLES--SIFFDFSGVSKTFSGHASGPLKRSHYLLHFVLEGQGTYFTMN 58 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 Y A D +I +D+N+P ++ G + EN + + Sbjct: 59 HKYTLKAGDFFLIRPDETIFYQADLNNPWHYAWISIGGTETAQLIENFSPFRNHHDTFSC 118 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY-IKKD 179 + +K + L+ L + L + L +L EN N + Sbjct: 119 ATVENYLKLIVESLT--LTSHRPQTELRLNQIASEILLLLMKENTWNVVEHQNATIRPMS 176 Query: 180 VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 K L Y+NNN+ ++ ++ + + SY+ F ++ ISP ++++ R+ EA Sbjct: 177 EYTKLSLAYINNNFTYDTSITDIADAIKINRSYLSRLFRRDVGISPKKFLLRLRINEACQ 236 Query: 240 SLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPV 299 L T+LS +IS +VG+ N F F + +PS YR++ +++ E+ Q Sbjct: 237 LLQTTQLSINQISEKVGFSNPSVFGHSFTELIHETPSAYRKRRSFNNIQEQHSLEWQQIN 296 Query: 300 SLVG 303 ++G Sbjct: 297 DILG 300 >UniRef50_C7IIE8 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIE8_9CLOT Length = 290 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 102/281 (36%), Gaps = 14/281 (4%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWES-GHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 + + P D + H H+ E + V KG A F +D + Sbjct: 9 KVMHGDDNFPIGIHKTDIDKGRDNILYLHWHEGF-EYLTVTKGRAVFKVDDLEIEVSKGE 67 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAG-------- 121 + I LH+ S + + + + + Q P++ Sbjct: 68 GIFINSNVLHSAHSINEEECSFFAVVCHPAFLSSYINDCINQRFINPILNHSLYFPIHLK 127 Query: 122 ---QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 + I L ++ I + + L Y + +N K + K Sbjct: 128 KDVDWQRNILLLLTQVYDINKEKEFGYELLLKSKI-YEIWFECIKNAKKSINKGSNTSYK 186 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 +K +L Y++ NY KI + + + S + C F + ++YV + R+ + Sbjct: 187 TERMKVVLNYIHENYFNKIVVSEFASLVHMSDEHFCRFFKAMTHFTLVSYVNRYRIERSC 246 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 L+ T +EI+ VG+ ++ +F K+F + +GC+P DYR Sbjct: 247 VFLSQTNKKISEIAGDVGFGDISYFNKVFRKIMGCTPVDYR 287 >UniRef50_C7GHF4 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GHF4_9FIRM Length = 291 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 131/294 (44%), Gaps = 25/294 (8%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSS 61 ++ D + T K RL K E+ +H HD E+ ++ G ++ I Sbjct: 6 REQLLDQLNPTFLFTWKGTRL---------KDEARYHSHD-FIEMAFILSGHGKYKIADR 55 Query: 62 LYVAHADDIVVIERGRLHA-VASDVNDPATTCTCALYGFQFQGAEENQLLQPH------- 113 LY DI+++ G+ H + +D ++PAT L +F EN L Sbjct: 56 LYDVSEGDIIILNPGQKHQALCTDPSNPATEFFVGLCDVRFGDFPENYLPLHLKDLTSDP 115 Query: 114 --SCPVIA-AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYR 170 P++ +G+ ++ + + +SV ++ + L L +L E + Sbjct: 116 ATQSPILHTSGELRQKLFKICTAMSVENDVCRSGRYIMLKSYLMQMLILLLREQSEPVKI 175 Query: 171 SEQ---GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 + K ++ I+ Y ++Y EKI+L+Q+++ S YI F E +PI Sbjct: 176 NTGCSFESTSKKYVVDQIVNYFEDHYSEKISLDQIAENMYLSPFYISRIFKSETGDTPIR 235 Query: 228 YVIQRRMTEAKWSLTNT-ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ++I R+ +AK L N + S E++ +VGY++V HF+KLF + G PS RR Sbjct: 236 HLINIRLEKAKELLENGFDGSIQEVAAKVGYDDVYHFSKLFKKRFGMPPSKIRR 289 >UniRef50_B1QZ26 Putative transcription regulator, AraC family n=2 Tax=Clostridium butyricum RepID=B1QZ26_CLOBU Length = 344 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 91/281 (32%), Positives = 147/281 (52%), Gaps = 5/281 (1%) Query: 1 MYQRCFDNASETLFVAGKTPRLSR-FAFSDDPKWESGHHVHDNETELIYVKKGVARFTID 59 M+ F+ S+ +F P+L R F + P W +H+H N TE++Y+ G A +TID Sbjct: 1 MFSFSFNKKSQDIFKDKHYPKLRRIFHNYNTPDWTYNYHLHKNSTEIVYIANGKATYTID 60 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE-NQLLQPHSCPVI 118 ++ ++++E+G LH+++SD P T + + G E N+LL + +I Sbjct: 61 METFILEKGHLLIMEKGVLHSISSDTEKPVDAWTIIIDDYTINGFSESNRLLNSSTYAII 120 Query: 119 AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 G +IK++ E+ + + ++++Y + E+ KK Sbjct: 121 KTGIHDLLIKSIMEEIRTLCIDETLISQFTCNMLATSLVSLIYGLLPEENLSIEK---KK 177 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 ++DIL Y++ +Y E ITL++LS F S +I H FTKEY +SPINY I R+ EAK Sbjct: 178 SSFVRDILVYISEHYNEPITLKKLSDVFHVSAGHISHAFTKEYTVSPINYAIDLRICEAK 237 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 L NT+ S IS +VGY N+ HF+ +F V CSP ++R Sbjct: 238 LLLLNTDESLTSISNKVGYTNISHFSNIFTSRVNCSPLEFR 278 >UniRef50_A7B7P4 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7P4_RUMGN Length = 253 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 98/254 (38%), Gaps = 7/254 (2%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G V N L +G F Y +I G+L +D +P + Sbjct: 6 PSYSFGPAV-RNCYLLHLCLEGEGVFYSGEERYPIKQGQGFLIHPGKLTFYQADSVNPWS 64 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 + G + L P+ + Q + + + + + Sbjct: 65 YLWVGIGGHDAEKYLRLAGLS-ARNPIFSCTQIDTAKSYILDMMKH--HALSAANEIYIQ 121 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 LA+L V I + Y++ NY+ +T+++++ + Sbjct: 122 GILMQFLALLVE---DAGCTVSPQQNTSSVYINQAISYIHKNYQNPLTVQEIADYLSLNR 178 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 SY+ F K ++SP ++ + R+T+++ L ++ LS I++ GY + F+K F + Sbjct: 179 SYLTELFLKTVQLSPQQFLTRYRITKSEELLQSSSLSIQNIAYSCGYSSSFSFSKAFRKV 238 Query: 271 VGCSPSDYRRQFKN 284 G SPS+YR+Q + Sbjct: 239 NGLSPSEYRKQKRG 252 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 206 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 105/270 (38%), Gaps = 7/270 (2%) Query: 15 VAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 + + +++ + H HD EL Y+ +G I+ +Y A+D V+ Sbjct: 8 IISQGKKIAYAYAEGVNDNMTQSHFHD-FFELYYLLEGERMHMIEGEIYHLTANDFVLFP 66 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNEL 134 +H + + P QLL + G I +L L Sbjct: 67 PHIMHHSYGEKDMPFKRIVLYFSPDLIANDTICQLLSEKELLFVNEGYIPNQILSLLLSL 126 Query: 135 SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYR 194 + + + + + L + +F+ + K + Y++N+Y Sbjct: 127 THEIDVPGKYHDAYICNQLNGLLLNMLRLDFEAVKSIPKTRSAK------AVDYIHNHYM 180 Query: 195 EKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWR 254 E I++ QL++ S ++CHEF + I Y+ R+ A+ + T+ + +IS Sbjct: 181 EDISVNQLAEILYVSPYHLCHEFKNATGKTIIQYLNTTRILHAQRLMLETDYNITQISRE 240 Query: 255 VGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 VG+ N+ HF + F + G +P + ++ ++ Sbjct: 241 VGFSNLTHFNRTFKKITGVAPREKKKLYQK 270 >UniRef50_A8RTE5 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RTE5_9CLOT Length = 310 Score = 206 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 110/287 (38%), Gaps = 7/287 (2%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDI 70 ET+ P D + H H + EL V +G F I+S Y +D Sbjct: 6 ETVIPNDDLPFRMFIFEGRDGNYRVSKHWHQS-VELFLVLEGTLDFFINSRQYTLKPNDF 64 Query: 71 VVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL 130 V++ +H++ DP T + F+G ++ K + L Sbjct: 65 VIVNPNEIHSIECP--DPNITIVLQIPMKSFEGYMSDE---SRITFADKDESQKARLVAL 119 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD-VLIKDILFYL 189 + + + + F L ++ E + K+ + + Y+ Sbjct: 120 VTAMYRTYEKGEFGYRLKVKSQFMEFLYLIVTEFRIEQIDKVRVQQKRHLDKLSQVTQYM 179 Query: 190 NNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQA 249 NY ++++LE ++ +F + SY+ H F + + Y++ R+ A L N++ Sbjct: 180 KENYDKELSLEMVASRFGFTPSYLSHMFREYAQTGYRTYLMDLRVKYAMRELLNSDRYVG 239 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFP 296 +I+ G+ + FAK F + GC PS YR+Q Q+ +++ Sbjct: 240 DIALDHGFADARAFAKAFKKRYGCLPSQYRKQMNQKQVNQKQMNQKQ 286 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 206 bits (525), Expect = 7e-52, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 113/285 (39%), Gaps = 15/285 (5%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 S + F+ + RF D W + H+ E++Y+K+G A F I +D Sbjct: 18 SSSTFIPVIVKTIERFH---DTSWHMEPNKHECF-EMVYIKRGKAVFEIAGYPAEIGPND 73 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGF-QFQGAEENQLLQPH--------SCPVIAA 120 I++I+ + H + +F G + L+ + P I Sbjct: 74 IIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDGQYSDVSLENFLDFVSGKETGPFITL 133 Query: 121 G-QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD 179 K I L N + + ++ S + K Sbjct: 134 KVSQKNDIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKI 193 Query: 180 -VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 LI+ + Y+NNNY I+L+ +++ S SY F +E ISPINY+++ R+ AK Sbjct: 194 KELIQASVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAK 253 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 L +T+ ++I+ VG+ N F +F ++V +P YR+ + Sbjct: 254 ELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_C6D3A6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3A6_PAESJ Length = 291 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 13/257 (5%) Query: 36 GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTC 94 H H++ ELIYV+ G +TI + D++ + G LH+ AS + N+P T Sbjct: 32 PLHWHEHF-ELIYVESGEVLYTIGGQPFPTKPGDMLFVNSGELHSAASLNPNEPFTVYAL 90 Query: 95 ALYGFQFQGAEEN--QLLQPHSCPVIAAGQGKEVIKTLFNELSV-------ILPQSKNSQ 145 E + L+ P++ + E +L+ L Q Sbjct: 91 VFNPSILGLKEPHIVDLVAPYTNGMSMIASRIEQTDSLYPLLKQTTLRLAGEFEQKPRGY 150 Query: 146 TSSLWDAFAYTLAILYYEN--FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 ++ L E + + + + K++L L ++ E++T+EQ + Sbjct: 151 ELAVRSYCQLLFTWLSREFTVMQRSDTEMNAFRARTNRFKELLTRLESDVAERVTVEQAA 210 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 S + C F K + + Y+ R+ A++ L NT +S +I+ +G +++ F Sbjct: 211 SFVHMSPYHFCRMFKKITGQTFVQYMNLNRINRAEYLLKNTAMSVTDIAAEIGCSSINSF 270 Query: 264 AKLFLRHVGCSPSDYRR 280 +KLF + G SP D R+ Sbjct: 271 SKLFRQLRGVSPRDLRK 287 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 5/252 (1%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H H N E+ Y++ G + +Y ++++ +H + + P Sbjct: 40 MKSHYH-NYYEIYYLEDGERYHMMQDDMYDMKPGELILFSPYIMHRSYGENDMPFKRIVL 98 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFA 154 + E L ++ ++ + + EL + S Sbjct: 99 YFESSEVASKELLDALDENNGMYRPDAATRQKLHRMLEELIRQYENPSDFYKSYRRTLLN 158 Query: 155 YTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYIC 214 L + R E +++ I+ Y++++Y+E ITLEQL++KF S Y+C Sbjct: 159 MFLFTMLMH----TRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFYVSQFYLC 214 Query: 215 HEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCS 274 EF + + + YV R+ A+ L T+ + EIS G+ N+ HF ++F G + Sbjct: 215 REFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVFKSVTGTT 274 Query: 275 PSDYRRQFKNCF 286 PS YR+ +N Sbjct: 275 PSGYRKHHQNMQ 286 >UniRef50_P96660 Uncharacterized HTH-type transcriptional regulator ydeC n=3 Tax=Bacillus RepID=YDEC_BACSU Length = 291 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 116/293 (39%), Gaps = 14/293 (4%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFA---FSDDPKWESGHHVHDNETELIYVKKGVARFT 57 M D + L + + H HD E + + + KG+A F Sbjct: 1 MKNFVIDQNLKELTEHRTVELPVACYKTTINQNINGYIPLHWHD-EIQFVLILKGIALFQ 59 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYG-FQFQGAEENQLLQPH--- 113 I+ H D + I G LH T + F + +QP+ Sbjct: 60 INEEKIEVHEGDGLFINSGYLHMAEEKEGSDCTYICLNVSPHFVLSQELYSSYVQPYMFS 119 Query: 114 -SCPVIAAGQGKEVIKTLFN---ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAY 169 + P + ++ K + + +++ ++ Q + + L F+ Y Sbjct: 120 TNLPYLFLAGNQQWAKNILDAVKKINQLIQQKTSLYEIDITMQLTLMWKNLVVNGFQLEY 179 Query: 170 RSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYV 229 +Q + K +K +L +++ +Y EKITLE ++K + S S C F + +P+ YV Sbjct: 180 --DQSEMIKSHRMKQMLNWIHLHYVEKITLEDIAKAGQLSRSECCRYFKRMLNKTPLRYV 237 Query: 230 IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + R+ ++ L + E + E+S++VG+ + +F F + + +P Y++ Sbjct: 238 MDYRIQKSLLLLQHPESNVTEVSYQVGFNSTSYFISKFQQAMNMTPLSYKKMN 290 >UniRef50_B0A7K6 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K6_9CLOT Length = 297 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 115/290 (39%), Gaps = 15/290 (5%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGH---HVHDNETELIYVKKGVARFTIDSSL 62 ++ E + ++ +FS+ K G+ H HD E ++ V KG F + Sbjct: 8 LNDKLEDVSISKAYSFPFEVSFSEIRKLSKGYVKLHWHD-EIQISIVTKGSVEFIVGEKS 66 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ 122 Y+ + I R+H S ++ + + + Q + PVI + + Sbjct: 67 YILKNGQAIFINTQRIHMAKSVGDEDCIYHAIMFNAKLLKMFPGSIIEQKYIDPVITSNK 126 Query: 123 GK-----------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRS 171 + +++ + ++ +L + + Sbjct: 127 LNSIEIYGNNNWEQDALKYISDIINVDIIQDKGYELKIYIDLLNFWLLLVLNDKDIFNQK 186 Query: 172 EQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 + + IKD+L +++ NY KITL+ ++ S C F K ++SP +Y+I Sbjct: 187 MEPKPINEQRIKDVLSFIHQNYSNKITLQDIADAVFVSKGECCRFFKKSLKMSPYDYLIN 246 Query: 232 RRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 R+ E+ L N+ LS +IS VG+ NV H+ ++F + G +P +YR Sbjct: 247 YRINESMKLLKNSSLSILDISENVGFNNVSHYIQIFKKKTGQTPLEYRNS 296 >UniRef50_B8D1C2 Transcriptional regulator, AraC family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D1C2_HALOH Length = 276 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 55/253 (21%), Positives = 99/253 (39%), Gaps = 9/253 (3%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P G V D+ + ++ G F + + Y A +I + +D ++P Sbjct: 30 PGHSYGPAVRDHYL-IHFIYNGRGIFQVGENTYHLEAGQGFLICPDIVTYYQADRHNPWE 88 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 +G + + L + PV + G ++ +F E++ + S+ L Sbjct: 89 YAWIGFHGLKAKDYLNRANLS-LANPVFSDTDGSP-LRFIFEEMTAARKLKR-SREIKLI 145 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 L+ L N + K+ IK + Y+ NY I + ++ Sbjct: 146 GLIYVFLSHLIELNVSGSTPDNNS---KENYIKKAIEYIEKNYSRHIKVIDIANHVGLDR 202 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT--ELSQAEISWRVGYENVDHFAKLFL 268 SY+ F + SP Y+I R+ +A + N LS +IS VGY++ F+K F Sbjct: 203 SYLWSIFNEFLNTSPQQYLINYRINKACELMKNRNLNLSIGDISRSVGYKDPLTFSKTFK 262 Query: 269 RHVGCSPSDYRRQ 281 + G SP Y++Q Sbjct: 263 KTKGISPLHYQKQ 275 >UniRef50_Q9KAQ8 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KAQ8_BACHD Length = 287 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 3/278 (1%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 G+ L P + G VHD L V +G F Y A D Sbjct: 12 FSEHGENNVLFSGYSQTFPYHKVGPQVHD-YFLLHVVLRGKGSFHCAGKTYSLSAGDSFF 70 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN 132 I L SD DP A G F+ + +QP S P+++ G +IK LF Sbjct: 71 IYPKELVTYESDRTDPWYYTWVAFQGPFFEETLRSAGIQPES-PIVSLGGKGSMIKQLFY 129 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 +L + + K + + ++ + S++ + D I+D++ L+ Sbjct: 130 DLYSSMTELKVASSLKTNAYLRLIISEFIEQTTILDEHSQKEDHQLDQHIQDVIRLLSLR 189 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 Y E +++E ++ + + +Y +F + SP Y++ RM +A+ L + L+ E++ Sbjct: 190 YFEPLSIETIAASYGYNRTYFSKKFKEYTGYSPSKYLLNIRMKKAEALLQKS-LTIQEVA 248 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQE 290 VGY + +F+K F + G +PS +R+Q ++ Sbjct: 249 SSVGYRDPLYFSKQFKQWSGVAPSVFRQQHLKESEPKQ 286 >UniRef50_A8RST4 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RST4_9CLOT Length = 307 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 105/294 (35%), Gaps = 20/294 (6%) Query: 4 RCFDNASETLFVAGKTPRLSRFA---FSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 + L G ++D H H++ E+IYV+ G + + Sbjct: 8 LNLNRTGRELQPHGTPDFPCAGYSSVYTDSAGDVVPWHWHED-LEIIYVESGHLKLQVPG 66 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 + V+ LH A++ + + G +++ + + P++ Sbjct: 67 KTLHLKQGEGAVVNSNILHFAAAEP--LCELHSLVFHPLLVTGEKDSVFSRRYVAPLLQC 124 Query: 121 GQGK-------------EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKN 167 +F + + + LY Sbjct: 125 RSFDICPFDYLAGDLRAGNPAAVFTAAFDAFCGEPLGYEFVVREKLSCICCCLYMYYSHA 184 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 S+ ++ I+ ++ +++ +++E + L Q+++ F + + SP+ Sbjct: 185 MDSSKPMPDTDNIRIQKMISFIHEHFQENLDLAQIARAADIGERECLRCFKRAIQTSPLQ 244 Query: 228 YVIQRRMTE-AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 Y+++ R+T+ A L + S + I+ G+ + +F+++F+R C+P +YR+ Sbjct: 245 YLLKYRVTQGASMLLRSPHSSISSIAGMCGFNSPSNFSQMFVRFFKCTPREYRK 298 >UniRef50_C5EG17 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG17_9FIRM Length = 317 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 116/278 (41%), Gaps = 10/278 (3%) Query: 14 FVAGKTPRLSRFAF-SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 ++ + P R AF S + + H H++ E+IYV G ++ ++ + ++ +V Sbjct: 15 YMIPQYPVYIRSAFLSQYHNYTAVSHWHED-VEIIYVLSGTMQYDVNGENITLYENEGIV 73 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQG--AEENQLLQPHSC----PVIAAGQGKEV 126 + H SD + ++ G + ++P + P + K+ Sbjct: 74 VNSRNFHFGYSDKKEECGFICFIIHPSVLSGNPYIRERYVRPFTECQAIPFLHLRPDKKW 133 Query: 127 IKTLFNELSVILPQSKN--SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 L L + +++ +A +LY N + + + ++ Sbjct: 134 QNELLEVLWTVFHLNQDAPEFYLLCQEAVFRIFTLLYTNNMELLSEKSEKADISLIQLRK 193 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ Y+ +Y++ I L+ ++K + C+ F K SPI+YVI R+ ++ LT T Sbjct: 194 MVGYIQKHYQDSIMLDDIAKIGEMGKTACCNIFKKYMNTSPIDYVITYRLAQSTVLLTET 253 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L EI++ G+ N ++ K F + G +P R+++ Sbjct: 254 RLPITEIAYGSGFHNASYYTKSFRKQYGKTPGQMRKEY 291 >UniRef50_C4Z204 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=2 Tax=Clostridiales RepID=C4Z204_EUBE2 Length = 277 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 96/252 (38%), Gaps = 7/252 (2%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 G HVH E+ Y+ G ID ++Y D+V++ G LH + Sbjct: 25 VGAHVHPFN-EIFYLSSGECTSFIDHNIYKFGKGDLVIVPSGCLHRTTYNGKGMHERIVI 83 Query: 95 ALYGF---QFQGAEENQLLQPHSCP--VIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 + Q +L++ P V + ++ + L ++L + + Sbjct: 84 SFRNEATEWIQNQTGKELMENCMKPGVVNIPEKRRDYVVALLDKLIFENDSPDELSPAFI 143 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 L + + + +I+++ Y+ +Y + ++LE ++ KF S Sbjct: 144 KVGLIELLLFIIR-CKNYEENVIKEIDVDNRIIQEVATYIYEHYADNLSLEYVADKFNLS 202 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 SY+ +F Y+I R+ A L T S +I++ G+ + ++F F + Sbjct: 203 RSYLSKKFKTATGFGFKEYIINVRIQNACNLLLETNKSITDIAFECGFNDSNYFGDAFRK 262 Query: 270 HVGCSPSDYRRQ 281 G SP YR+ Sbjct: 263 AKGISPHKYRKN 274 >UniRef50_C0CH60 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CH60_9FIRM Length = 278 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 8/265 (3%) Query: 18 KTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGR 77 T LS DD W S H H + TEL YV G +F + + D+V+I Sbjct: 17 NTRLLSISLVKDDKDWNSVFHTH-HFTELFYVVSGEGKFLFRNETHHIKTGDLVIIPPYL 75 Query: 78 LHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVI 137 H S + F +Q + + + +F ++ Sbjct: 76 EHTEQSVKGKSLEYYVIGIDKISFLAENGQTGIQAFCNF-----RDQSSVSDIFAQMLYE 130 Query: 138 LPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKI 197 + + IL + + I YL+ NY E+I Sbjct: 131 MRNDDYGSEIICQNLLEI--LILRIIRSQRLIPISINSERMTKECAQIKEYLDTNYTERI 188 Query: 198 TLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGY 257 TL+ L+ + Y+ H F K +SPI Y+ +RR+ A L +T+ S ++I+ G+ Sbjct: 189 TLDTLTSLTHMNKYYMAHSFAKYAGLSPIQYLNRRRLKIACTLLRDTDHSVSDIASSTGF 248 Query: 258 ENVDHFAKLFLRHVGCSPSDYRRQF 282 + +F + F ++ G +P YR+Q Sbjct: 249 SSQSYFTQSFRKYYGMTPLQYRQQN 273 >UniRef50_C2LSM7 Transcriptional regulator n=5 Tax=Streptococcus RepID=C2LSM7_STRSL Length = 313 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 13/266 (4%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H E E+ YV G AR+ ID + + A DI +I LH++ N P T T Sbjct: 50 FHWHP-ELEIQYVYGGTARYHIDYDYFDSQAGDIFLIRPNGLHSIHPVDNQPHHTDTLHF 108 Query: 97 YGFQFQGAEENQLLQPHSCPVIAA-----------GQGKEVIKTLFNELSVILPQSKNSQ 145 + + + L + P+ + +G IK L ++ ++ Q + Sbjct: 109 HLDMLGQSLVDPLSLRYLQPLQNSNFKFKQCLRPSDEGYTEIKDLLFKIFKMIRQKERHY 168 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 L + +LY+ S+ Y +K+ I++I+ Y+N +Y E +T+E+LS+ Sbjct: 169 ELLLKSKLEELIYLLYFYRLVERKTSDDHY-RKNEKIREIIDYINQHYAENLTIEKLSEL 227 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S ++ F + S ++IQ R+ A L N+ EI+ VG+ N+ +F + Sbjct: 228 MGYSKTHFMTIFKQHTGTSCTEFIIQARLNAACEELRNSVKPVLEIATTVGFNNLSNFNR 287 Query: 266 LFLRHVGCSPSDYRRQFKNCFAEQEI 291 F + +PS YR+ N ++ Sbjct: 288 QFKHYYDQTPSQYRKTHSNKKKTKKS 313 >UniRef50_B5CXD1 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CXD1_9BACE Length = 293 Score = 204 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 101/272 (37%), Gaps = 11/272 (4%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 L + S H+ LIY +G + I +D + Sbjct: 33 LHPTDVGYYPCAEGHYRERTEGSPQHI------LIYCHEGEGWYNIGKGKCTVKKNDFFI 86 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN 132 IE G H A+ + P + G + + + + + Sbjct: 87 IEAGTPHVYAASTSHPWSIYWIHF-----TGEQSHLFSELFNRTIYIDDSPTARFNDRIQ 141 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 + IL + + + L L E K I+ ++ Y+ N Sbjct: 142 LFNEILVNLEMGYSIENLEYITLCLWYLLGSFRYIPQFREINKPKTQDTIQKVINYMKAN 201 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 +++TLE +++ S +Y+ FT++ +SPINY Q ++ +A L T+ EI+ Sbjct: 202 LDKQLTLEDMAESVNYSPTYLSTLFTQKSGMSPINYFNQLKIQKACQLLDFTDKKAKEIA 261 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + + + + +F+K+F +++ SP +YR + K Sbjct: 262 FELAFSDPYYFSKVFTKYMHMSPKEYRMKKKG 293 >UniRef50_C5EQL5 Transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL5_9FIRM Length = 290 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 88/253 (34%), Gaps = 8/253 (3%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H + E+ Y+ G R ID +Y D V+I ++H + A Sbjct: 37 PHYH-SYYEIYYLLSGQCRMFIDQDIYYLKPGDAVIIPPLQIHRALYEEGLQAERYDMYF 95 Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKEV-----IKTLFNELSVILPQSKNSQTSSLWD 151 + + + + I+ L + LS Q Sbjct: 96 TKEEADAFHASCGREGFERVFLNPRIAIPQPLRPGIEGLLSHLSHENGQEDAYSHVQQQS 155 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 L ++ ++ + + + I Y+N YRE +TL+ ++ S + Sbjct: 156 LLFQILVLI--GRCQDTQQEKDSLNDSEAAIVKAARYINLQYREHLTLDAMAAMSNMSPT 213 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 Y +F YV R+ +A L NT+ + I+ G+ + ++F +F + Sbjct: 214 YFSRKFRASTGFCFKEYVNYIRVQKASDLLRNTDGTVTSIAIACGFSDGNYFGDVFKKLT 273 Query: 272 GCSPSDYRRQFKN 284 G SP +YR + Sbjct: 274 GLSPREYRNGIRG 286 >UniRef50_C9KND9 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KND9_9FIRM Length = 298 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 54/278 (19%), Positives = 99/278 (35%), Gaps = 8/278 (2%) Query: 21 RLSRFAFSDD-PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 L+ F S P G V + + ++ G F + Y HA +IE Sbjct: 18 FLTTFGHSVTGPGHRYGPAV-RSYHLIHFILAGKGTFQANQHTYCLHAGQGFLIEPDYQT 76 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 SD +P T A G + + L + + ++ Sbjct: 77 TYESDAKEPWTYIWVAFNGSRAAEIIASLRLSQADPIYTCTKEQGAKLAAYVQDMLAHNS 136 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 + + + L L + + A R + I + ++ + E T+ Sbjct: 137 FTLSGRYYRLG------LLMQFLSVLAEAQRDLLPPADNNAYISHMTNFIRTHLEEPFTV 190 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 ++L+ + SY+ F + SP Y+ R+T+A+ L T S I++ GY Sbjct: 191 QELADYMNLNRSYVTTLFKRYLHCSPHEYIQNCRLTKARHLLETTTFSVESIAYSCGYAK 250 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQ 297 D F + FLR G +P+ YRRQ ++ + + + Sbjct: 251 SDSFQRAFLRKAGMTPTAYRRQQQSSYLQATEPPSSAE 288 >UniRef50_C6D3K6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3K6_PAESJ Length = 277 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 2/263 (0%) Query: 23 SRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVA 82 S F + ++ H H+ +EL+ V++G F +D Y +++ RG H Sbjct: 17 SEFNCHEASPFQHPLHRHETFSELLLVEEGRGTFVVDGKPYEVGPGTVLLYHRGIWHEEW 76 Query: 83 SDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSK 142 S + P A Q +G +N L P PVI G+ + +L E L Sbjct: 77 S-THYPFRATYFAFKDLQVKGCPQNYFLGPDQAPVIELGEKTDETASLVRECLAELHSGL 135 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 ++ F LA L + + +IK Y+ NY++ ITLEQL Sbjct: 136 AESRAAANHLFGLLLARLARLVPGESTERRIVKPAEAAVIK-ARGYIEENYQQPITLEQL 194 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 +K S Y+ H F +E IS I ++IQ RM AK L T EI VGY++ Sbjct: 195 AKVTFVSKYYLSHLFQQEVGISVIQFLIQCRMEAAKRYLIMTGRPVKEIGELVGYQSEPT 254 Query: 263 FAKLFLRHVGCSPSDYRRQFKNC 285 F LF + G +P +R + Sbjct: 255 FHNLFKKVTGLTPGQFRESAREK 277 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 11/267 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H++ ++ Y G A+ + + A+D+V++ LH + S +D T Sbjct: 30 NFPRHWHEH-LQVYYFISGTAKLECGKNNFEVQANDLVIVNPNELHYLES-TSDNLVFYT 87 Query: 94 CALYGFQFQGAEENQLLQPHSCPV-------IAAGQGKEVIKTLFNELSVILPQSKNSQT 146 + L + P+ Q + L ++ + K Sbjct: 88 IRFEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYE 147 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI--KDILFYLNNNYREKITLEQLSK 204 ++ Y + L + ++ + K+ LI + + Y EKITL +L+ Sbjct: 148 LAIKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLAN 207 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 SV + C F + + +Y+ R+ ++ + L T+ + EI+ G+EN ++F+ Sbjct: 208 TVGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFS 267 Query: 265 KLFLRHVGCSPSDYRRQFKNCFAEQEI 291 ++F ++ SPS YR +KN + Sbjct: 268 RIFKKYHSTSPSQYRNLYKNLAVTPKE 294 >UniRef50_C3WEF1 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WEF1_FUSMR Length = 285 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 7/264 (2%) Query: 26 AFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV 85 + G L V +G F +D+ Y +IE + +D Sbjct: 19 YSECESLHSFGPASRPTYI-LHIVLEGKGIFVVDNKKYFLEKGQGFIIEPNIVTFYQADA 77 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 +P G + + H P+ + E+ L L ++ Sbjct: 78 KNPWKYFWIGFDGEGAEKYLRELGIIQH-KPIFRTDKLDELFSLLKEMLKR--KNLTLAE 134 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 L F +++ E N+ + + + + I+ Y+ NNY + I + + + Sbjct: 135 ELKLQGLFYEFFSLIVEE---NSIEEKDEKNELNPYVDKIITYIKNNYWDDINVNNIIEY 191 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 + SY+ F K I+ Y+ R++ A L T S ++ GY++ F K Sbjct: 192 VGLNRSYLSTLFKKNMGITIQEYLTVFRLSRANELLDITNESIENVANSCGYKDPLVFTK 251 Query: 266 LFLRHVGCSPSDYRRQFKNCFAEQ 289 + + G +P+ +R++ + E Sbjct: 252 AYKKKYGVTPTQHRKKDRKEAKEN 275 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 54/249 (21%), Positives = 103/249 (41%), Gaps = 7/249 (2%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 S H HD EL Y+++G I LY H + ++ +H N P Sbjct: 21 SKSHYHD-YFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPYVMHHSYGQENVPFKRLLV 79 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFA 154 + + ++L+ + + K+V+ + ++L + + Sbjct: 80 YFSKEEVDSVQLLKVLEKGTGVYKPDQREKQVVHRMLDDLLKEQDDPQAYHEDYIHTLLN 139 Query: 155 YTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYIC 214 L + +K I D++ Y++ NY+E I+++QL++ S Y+C Sbjct: 140 MALLTIARNI------QTPVKPEKRNRITDVISYIHQNYQEDISIDQLAQMSYVSPYYLC 193 Query: 215 HEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCS 274 EF + + I YV R+ A+ T + EIS G+ N+ HF ++F +G + Sbjct: 194 REFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDTGFSNITHFNRVFKSVMGMT 253 Query: 275 PSDYRRQFK 283 PS++R+ +K Sbjct: 254 PSNFRKMYK 262 >UniRef50_C8QEI2 Transcriptional regulator, AraC family n=1 Tax=Pantoea sp. At-9b RepID=C8QEI2_9ENTR Length = 289 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 66/283 (23%), Positives = 129/283 (45%), Gaps = 6/283 (2%) Query: 1 MYQRCFDN-ASETLFVAGKTPRLSRFAFSDDPKWESG--HHVHDNETELIYVKKGVARFT 57 M C + S F G PRL+ ++ + H HD+ EL++++ G + Sbjct: 1 MLTYCLNEHPSARGFENGHRPRLTFICKAEGIEAAIPRVMHKHDDRFELMFIRAGSGIYN 60 Query: 58 IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 ID Y D+++ LH +D +C + + +G +N L H V Sbjct: 61 IDGRGYQVQRGDLLLFNANVLHDENPAPSDDLLIFSCGVEQLKVEGLPQNVLTTRHQVAV 120 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 + +G+ + I LF+++ + + +S + D L +L + + +Q Sbjct: 121 MPSGEFYDEICQLFDQMWSHVSSKRL-FSSEVGDNLISILLLLCRNIWIENKQDQQNNHT 179 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 + I Y++++Y+++I L+ ++ + Y+ H F SP Y +RR+ EA Sbjct: 180 LLG--QRIKDYIDDHYKDEIALKSITAALNMNQFYLAHVFKAYSGYSPKQYQTRRRIGEA 237 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + L +T L E++ VGY+NV++F ++FL +G P+ Y++ Sbjct: 238 QSLLLSTNLGVTEVANAVGYDNVNNFHRIFLNLIGIPPARYKK 280 >UniRef50_C6JJY6 Transcription regulator n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJY6_FUSVA Length = 288 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 115/284 (40%), Gaps = 16/284 (5%) Query: 12 TLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 + + K P + S P++ H H E E+I + G ID+ Y DI+ Sbjct: 10 MVHGSTKFPFAYYYVNSYHPRYHMITHWH-KEYEIIRILSGTFNIKIDAVSYTVKTGDIL 68 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVI---- 127 + G +H+ T ++N L+ +I + +++ Sbjct: 69 FLNSGAIHSGIPV---DCTYECLVFDISSL--LQQNSLVNTELNALIHYKKKIQLLFDKK 123 Query: 128 ----KTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD-VLI 182 + N++ I+ KN ++ Y L ++ +N + KK I Sbjct: 124 LGAVYDILNQMFEIMKDKKNGYQLRIYGNLYYFLGLVEEKNLYIKEKEFSAINKKSLSRI 183 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 K +LF++ Y E I+LE ++K + + Y C F + + +P+ Y+ R+ A + Sbjct: 184 KKVLFFIETKYMENISLEDMAKTIKMNEKYFCKFFKEITKKTPMEYLNHYRIECACEKIK 243 Query: 243 NTELSQAEISWRVGYENVDHFAKLFLRHV-GCSPSDYRRQFKNC 285 + S ++++ G+ + +F K+F ++ G +P +Y + + Sbjct: 244 FFDSSITDVAYDCGFNDTSYFTKVFKKYNSGMTPREYSKLYLKK 287 >UniRef50_C9KMM6 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMM6_9FIRM Length = 241 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 7/246 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H HD+ EL+ V +G + ID Y A ++++ +H T A+ Sbjct: 1 MHEHDHLCELLLVSQGAGIYMIDGRRYTAQKGNLIIYNSRTVHDEFGGSGSNLVTYCIAI 60 Query: 97 YGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYT 156 G + G + LL CPV Q +++LF+ + +S + L A Sbjct: 61 GGLRIDGLPADHLLPDGYCPVQPLRQHFAEVQSLFDAIEKE-AKSHAEIANYLTMALITK 119 Query: 157 LAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHE 216 LA E + L +++ NY+E I L ++ + Y+ H Sbjct: 120 LAAFLREEGLQEEQQTPT------LAARARAFIDKNYKEAIRLGDIATATHTNAYYLSHL 173 Query: 217 FTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 F E +SP+ YVI RR+ EA+ L NT+++ +I+ +VGY N ++F +F + +P Sbjct: 174 FKAEIGLSPMKYVILRRIGEAQNLLINTDMTITQIAAQVGYNNSNYFQNVFKGALDMTPG 233 Query: 277 DYRRQF 282 +YRR++ Sbjct: 234 EYRRKW 239 >UniRef50_B0NUZ5 Putative uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NUZ5_BACSE Length = 305 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 56/287 (19%), Positives = 113/287 (39%), Gaps = 15/287 (5%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 +E L ++ P +R+ D ++ H H ++ E+IYVKK R + + D Sbjct: 22 NEQLQISESNPIKARYYDYD--RFTYPWHFH-SQYEIIYVKKSCGRCFVGDCIECFSEGD 78 Query: 70 IVVIERGRLHAVASDV----NDPATTC--TCALYGFQFQGAEENQLLQPHSCPVIAAGQG 123 +V+ H + SD ++P T + F + Q H V+ Sbjct: 79 VVLFGPSLPHYMRSDDAYHGDNPRLRVQGTIIQFEENFMQYSFDHYPQFHQIRVLLKEAR 138 Query: 124 KEVIK------TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 + V+ + + +S Q + L D + + E+ Sbjct: 139 RGVVFHTADAGAVRDMVSAFPELKGFGQITGLLDLLQALAVSVPRRMLASPCYYEKFPTA 198 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 + I I+ ++N+NY + L+++++ + S C F + + YV R+ A Sbjct: 199 GNKRIDKIISFINSNYTRSLKLDEIAEMANMNSSAFCRFFKDATGKTFLQYVADMRIGYA 258 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 LT ++ ++I+ G++++ HF + F + G +P+ YR Q Sbjct: 259 CKLLTIGDMEISQIAVECGFDSIPHFNRTFKQLTGLTPTQYRNQIMK 305 >UniRef50_C9KN97 Putative AraC-type DNA-binding domain-containing protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN97_9FIRM Length = 281 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 6/277 (2%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESG--HHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + +F + PRL ++ P H H + E I + +G ID Y Sbjct: 9 KPVFTSEAMPRLVTLYRAETPYTSMPRTMHRHGDVAEFILITEGSGIHIIDGQRYYTQKG 68 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIK 128 D+++I + +H +S N + + A+ G Q + L P PV+ Sbjct: 69 DLLLIGQDVVHDESSPANRNLSIYSGAIRGLQLPNLPAGKFLPPDVLPVLKTEGLFPDFC 128 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 L + S+ L ++ + RS ++ L+ + Sbjct: 129 HLLEFMYRGAQGKGCHPEESINHLLCALLLLVM----EVTSRSVVLPPEEHHLLAGVRSR 184 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 L+ Y E ITL L+++F S ++ H F Y +P+ Y+ +RR+ EA+ L +T L Sbjct: 185 LDAAYDETITLAGLAQEFHVSTFHLAHAFKAAYGYAPLQYITRRRIGEAQTLLIDTALPI 244 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 EI+ R GY + +F K F + G SP DYR+ ++ Sbjct: 245 TEIAIRTGYNSSSYFNKAFHKITGMSPRDYRKTYRKI 281 >UniRef50_A5ZP25 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZP25_9FIRM Length = 300 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 119/292 (40%), Gaps = 15/292 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTID 59 + D G R+ + + ++ H H +E E IY++ G F I Sbjct: 9 KTTTDANLMETVHHGSAEYPFRYYYENIALFDFKCIDWHWH-SELEFIYIESGNVVFDIG 67 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 + + + + ++I LH + S + L+ F +++ + + + PVI+ Sbjct: 68 TVHFELNEGNGIMINSKILHRLQSSSD---AIIPNFLFQPSFIAPQDSLIYKKYINPVIS 124 Query: 120 AGQGK-------EVIKTLFNELSVILP-QSKNSQTSSLWDAFAYTLAILYYENFKNAYRS 171 + K + I+ Q + L IL EN Sbjct: 125 SSLEYLVFQPDIPWQKKALEIIKTIIAVQETEFNREIIVSMSVQQLWILLLENLTFDQFE 184 Query: 172 EQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQ 231 G + ++ ++ Y++ +Y E ITLE +++ S S H F +++P+ Y+I Sbjct: 185 NMGAVISRTRLQLMMQYVHAHYSENITLEDIARTANISKSTALHLFQNNLKLTPVKYLIN 244 Query: 232 RRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 R+T+A L NTE A IS G+ NVDHF + F + +P+DYR Q + Sbjct: 245 YRLTQAALLLINTEEKIATISNNTGFNNVDHFCRTFKKTYKMTPTDYRNQER 296 >UniRef50_C1I9Z9 AraC family transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I9Z9_9CLOT Length = 284 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 5/277 (1%) Query: 9 ASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 A+ + + + + P E+ +H H++ EL ++ G + I+ Y Sbjct: 6 ANIDCYNPQILFVIDGWCSPEIPVPETNYHCHEDFIELSFITSGSVDYLIEGEKYTLKKG 65 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIK 128 +++ G H + N L + + + V+ + K+ I Sbjct: 66 QVLISNPGVYHQELFEANTNCRELHIGLTNLNLFSNVKKDYIDIGNKNVLTFTKYKDEIL 125 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG-----YIKKDVLIK 183 E+ + L L +LY E + + +K L++ Sbjct: 126 KSCLEIVEEQKTYNQTSPFMLKSLVMKLLVLLYREINEEDTTRDSKEFSFKSREKKALVE 185 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 I YL NY E I+L LSK S YI F + SPINY+IQ R+++AK L + Sbjct: 186 SITKYLTENYTEDISLYTLSKNMYLSPVYISKIFKELMGDSPINYLIQIRLSKAKELLDD 245 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ++LS I+ VGY + +F+KL+ ++ G SP+ R Sbjct: 246 SKLSIKSIAKMVGYSDPYYFSKLYKKYYGVSPNKSRN 282 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 107/274 (39%), Gaps = 11/274 (4%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P D + H H+ E E I + GV T+ + H + I G L Sbjct: 16 FPLQVYSHHDKDGFFSVSQHWHE-ELEWICAEHGVLNLTVRGRSFTLHPGEFCFINSGEL 74 Query: 79 HAVASDVNDPATTCTC--ALYGFQFQGAEENQLLQPHS--------CPVIAAGQGKEVIK 128 H + S + F ++ ++P + P + + + ++I Sbjct: 75 HEIKSGGPSLHHAIVFNPDILDFTLYDICQHSFIRPVTSGNLIFPTLPSVFSPEESQMIL 134 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 E+ + + + S+ L + + + +K ++ Y Sbjct: 135 FHMQEIIRLYHTLPSCASLSIKIHILQILELFFQADCFLENTISSKEKDSQNKLKKVIEY 194 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 ++ NY I+L L+K S +Y CH F +E PI ++ + R+ +A LT++EL Sbjct: 195 IHENYAGPISLPDLAKICFMSPNYFCHYFKQEIGKPPIAFINEYRIQKACQILTDSELPV 254 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++++ VG++N +F + F + +P++YR Sbjct: 255 SQVAISVGFDNFSYFIRKFREYKNVTPTEYRSHL 288 >UniRef50_C6CRK8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRK8_PAESJ Length = 284 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 3/250 (1%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 DP G + D + YV G +F + Y HA +I G L +D ++P Sbjct: 30 DPGHYWGPGLRDMYI-IHYVHSGTGQFRLGELSYELHAGQGFLIIPGSLVYYKADEDNPW 88 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 T L G + + L P + P+ A + K+ ++++ + L S Sbjct: 89 TYSWVGLKGLHAKSLLQRAGLSP-ANPIFDATEQKDFFESVYEQCHQALEDHPGSGDLFS 147 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 +A L K K+ I + ++ N+Y I+++ ++ Sbjct: 148 QSLLYQYMARLVA-CNKQPSAPAHAVNTKEAYINKAVAFIENSYSLPISVQDIANFVGLD 206 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 +Y+ F + +S ++++ RM A L + EL+ +I+ VGY + F+K+F R Sbjct: 207 RTYLSGLFKAQLGVSLQAFLLRFRMNRAVELLHHQELTIGDIARSVGYTDPFLFSKMFKR 266 Query: 270 HVGCSPSDYR 279 +G SP R Sbjct: 267 VIGSSPRTSR 276 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 104/253 (41%), Gaps = 8/253 (3%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P + G V + Y+ G F +D+ Y HA +I +D P + Sbjct: 29 PGHKYGPAVRP-YYLIHYILSGSGIFKVDNVTYHLHAGQGFLIVPNCRTTYIADKETPWS 87 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 G +Q+ PV + + E + NE+ + S + +L Sbjct: 88 YVWLGFTGKSAATWI-DQINISEIRPVFNSNKSYE-LANCVNEILALDNLSMENNLRALS 145 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 L Y +Q +K+ + + Y++++ K+T+E L+ + Sbjct: 146 C----FFRFLSYIATGTVINIQQANSEKNHYVTQAIQYISHHLS-KVTVESLAHAVNLNR 200 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 SY+ F + ++P Y+ R+T+A+ L ++++S +++ + GY+ + F ++F R Sbjct: 201 SYLTSLFKHDLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRT 260 Query: 271 VGCSPSDYRRQFK 283 G SP YR++ K Sbjct: 261 YGISPRQYRQETK 273 >UniRef50_UPI0001B9ED63 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001B9ED63 Length = 287 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 54/275 (19%), Positives = 109/275 (39%), Gaps = 7/275 (2%) Query: 12 TLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 T+ + +E +H H E+ Y+ G + I LY A D++ Sbjct: 9 TVSYGEEEGEFYYHRIHRTKPFERNNHYH-GTYEIYYLVSGERHYFIKEKLYSIRAGDLI 67 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQG---AEENQLLQPHSCP---VIAAGQGKE 125 +I + +H + + + LL + + + Sbjct: 68 LINKFDVHKTSGHGDPEHERIVINFSDSFLGKGHPLLASGLLGMFNQDRPLLRLTVPEQA 127 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 +I + N+++ + + S L L Y + + I D+ Sbjct: 128 IIMQILNKMADEIRERSASYEHMLQVLLTELLIKTYRLTHSASLPANVSMNPLHQKITDV 187 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 + +++ +Y +KITL+ LS+ F S Y+ F + + INY+ R+ EA+ LT+T+ Sbjct: 188 VKFIHVHYADKITLQGLSETFYISPFYLSRIFKEITGFTIINYLNLTRIREAQRLLTDTD 247 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L +I+ +G+E++ HF + F + + + S YR+ Sbjct: 248 LKIVDIAESIGFESLTHFDRTFKKIMNMTASQYRK 282 >UniRef50_C5RH22 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RH22_CLOCL Length = 278 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 58/277 (20%), Positives = 104/277 (37%), Gaps = 14/277 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 + + L V PK G + D+ + Y+ G +F + + Sbjct: 10 SESINKENRDLLVYHHGIEQC------IPKHCYGPAIRDHYL-IHYILAGKGKFHANGKI 62 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ 122 Y D +I + +D N+P T G + E+ L + + Sbjct: 63 YELVTGDGFLILPDMVTFYEADENEPWTYVWIGFRGIKAAAYLESANL-NMNNLIFNCT- 120 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI 182 E++K F ++ + L + L+ L +A D+ + Sbjct: 121 -SEILKEYFFKIMNA-NLYSSGYELRLQGYLSIILSEL---IDISAMDILDTNKHSDIYV 175 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 + L Y+ NY +++ ++K + +Y F K ISP Y+I+ ++ +A L Sbjct: 176 RKALQYIETNYSGSTSVDAVAKAIGLNRNYFSTIFKKHIGISPKEYIIRYKIGKACEFLK 235 Query: 243 NTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 N L+ +EIS VGY + F+K+F G SP YR Sbjct: 236 NNSLTISEISKSVGYNDPLSFSKVFKHIKGVSPKYYR 272 >UniRef50_A7VID9 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A7VID9_9CLOT Length = 289 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 10/279 (3%) Query: 17 GKTPRLSRFAFSDDPK-WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 K S + + + ++ H HD E E+IYVK G I Y+ D V+ Sbjct: 13 TKDDPFSTYHIENAGQSFQIPVHWHD-EFEIIYVKSGFLTVNISGENYIGKPGDAFVVSP 71 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV-----IAAGQGKEVIKTL 130 G LH + S T ++ L P+ + + K+ IK L Sbjct: 72 GNLHFMGSKTGT-VDYFTFLFPLKYISFYTDDILDDRLLEPLDSGRLMISPSVKDTIKEL 130 Query: 131 FNELSVILPQSKNSQTSSLWDAFA--YTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 +L I K+ + ++ L E ++ + E ++++ K+++ Y Sbjct: 131 CEQLIEIYEAKKSERELNITTQIKTKIILLQFILEMWEKGFIVENNTSGRNIVEKEMVSY 190 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 + N+ KI+L++ ++F S YI F + + I+ YV R+ AK L +T++S Sbjct: 191 IQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYVAYLRLEYAKQLLQDTDISV 250 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 E + R GY+N+ +F + F + G SP YR++ +C Sbjct: 251 TEAAMRSGYQNISYFIRSFKKTYGVSPLKYRKKQVDCMQ 289 >UniRef50_C9AXT8 Putative uncharacterized protein n=2 Tax=Enterococcus casseliflavus RepID=C9AXT8_ENTCA Length = 308 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 52/278 (18%), Positives = 97/278 (34%), Gaps = 14/278 (5%) Query: 16 AGKTPRLSRFA---FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 G + S ++ H H E E++ V +G ++ A+ IV+ Sbjct: 17 HGTEDFPLAYYPNLVSVWREFFFVPHWH-KEIEILCVHQGQLELVVNGFSRKIKANTIVL 75 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA---------AGQG 123 I LH + +++ P + Sbjct: 76 IPPNTLHTAYRIAQQSCRFSCIVFSEQLITSRQSDRIQSQQIDPFLIQEGVTSYVDFPDK 135 Query: 124 KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIK 183 + TLF + + L L+ L E + + ++ K Sbjct: 136 SQQSLTLFQLFDQCFMGKSSYRELRLKGIVIQLLSHLL-EVGTDQPAKKSSERLQEKREK 194 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 +L Y+++NY E I L+ L+ S F + +R SP+ Y+ R+ + L Sbjct: 195 IVLSYIHSNYHEMIQLQDLADSVSLSKEQFTRFFKQSFRTSPMAYLNHYRLIRSAELLRE 254 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 T+L+ I+ VG+ N +HF+ F + G +P+ YR+ Sbjct: 255 TDLTMVAIAQAVGFCNSNHFSVCFKKMFGETPTQYRKN 292 >UniRef50_A8SS52 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS52_9FIRM Length = 300 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 94/256 (36%), Gaps = 12/256 (4%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H HD E E+ + G + +A + I G LH + + Sbjct: 42 IPPHWHD-ELEVFVLLSGQVEVVTGDISCIVNAGEGCFINGGVLHTFRALSLGECRYHSF 100 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIAAGQG------KEVIKTLFNELSVILPQ---SKNSQ 145 GA + + P + G E ++ F E + Sbjct: 101 VFESSIVAGAPGSIFDTKYMKPFVEKGHSFVHMKRDEGMEPFFEEFDRCFDACAGEGYAY 160 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 + D+ + + NA +V IKD+L +++ N +++IT+ ++ Sbjct: 161 EFDIRDSLTRMILCIAQNM--NAPGDSDMPHLAEVRIKDMLGWIDRNLKDEITVSGIAGS 218 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 V F++ P+ YV +RR+T A L T +I+ G+ +V +F K Sbjct: 219 ANICVRECQRIFSQYVHYRPMEYVQRRRITLAAELLRTTHRQVTDIALECGFSSVSYFIK 278 Query: 266 LFLRHVGCSPSDYRRQ 281 F VGC+P+ YR++ Sbjct: 279 QFKNIVGCTPTGYRKK 294 >UniRef50_Q0TS97 Transcriptional regulator, AraC family n=6 Tax=Clostridium RepID=Q0TS97_CLOP1 Length = 285 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 95/282 (33%), Gaps = 13/282 (4%) Query: 11 ETLFVAGKTPRLSRFAFS--DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + G F + ++ +H H E E+I + +G ID +A + Sbjct: 7 KENKQHGTFDFPIEFYHVTPNHSRYNMPYHWH-TECEIIRILEGEFILFIDKEKILAKKN 65 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE------NQLLQPHSCPVIAAGQ 122 DI+ + G H + ++ + Sbjct: 66 DIIFVHSGIFHGGLP---NDCIYECIVFDMKLLLKDNNACTKQIYDIVNHNKVIAHKLPS 122 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL- 181 + + L + A Y + + K+ L Sbjct: 123 NVQALNNCCTSLFEAMRVKSTGYEFIAQGALYYLIGTILENQLYVKNNKYTKKTKERFLQ 182 Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K+++ + N Y+ +TLE LSK S Y C F + +PI Y+ R+ + L Sbjct: 183 LKNVITLIENEYQNPLTLEDLSKASGMSPKYFCRFFHEMINKTPIEYLNYYRIEISCEKL 242 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 TELS EI+ G+ +V +F K F +H G +P Y + K Sbjct: 243 LATELSITEIALNCGFNDVSYFIKTFKKHKGVTPKQYLKSLK 284 >UniRef50_A5ZUG1 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZUG1_9FIRM Length = 277 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 9/282 (3%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 F + S+ + + ++ + + W S H H TEL YV +G F I++ + Sbjct: 5 FFSFSDDTPFSTEAVLVNASSSHYEEDWPSIPHTH-AFTELFYVSEGSGEFLIENQHFSI 63 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 DD++++ H S P + T + G F ++ + + Q Sbjct: 64 KKDDLIIVNPHIQHTEISLSASPLSYYTVGVDGISFSFHDQKEF------QIFHYHQKHA 117 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 + F+ L L + + A ++ L + + K+ + + Sbjct: 118 DLLFYFHSLFQELDEKNDGYEEICKHTLAILISQLRRFAVSDFQLFPSFHPSKECAL--V 175 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 YL+++Y + I LEQL+ + Y+ HEFT+ Y ISPI+Y+ RR+ K L NT+ Sbjct: 176 KRYLDSHYSDDINLEQLASLSHLNKYYLSHEFTRYYGISPISYLTHRRIEVCKNLLENTD 235 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 ++I+ G+ + + A+ F ++ G + +YRR KN Sbjct: 236 HEISDIAHLAGFSSQSYLAQSFRKYCGMTAGEYRRSKKNQTI 277 >UniRef50_B7MQA3 Putative AraC-type DNA-binding domain-containing protein n=12 Tax=Enterobacteriaceae RepID=B7MQA3_ECO81 Length = 289 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 7/278 (2%) Query: 15 VAGKTPRLSRFAFSDDPKWES--GHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 P+L+ + + H+H ELI + +G + I +Y D+V+ Sbjct: 9 ERENKPQLAYVSQVSESNGPYVRFMHMHPQTVELILITEGDGEYFIGDRIYPVRKGDLVI 68 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN 132 +H + P T C + G EN L+ PVI ++ L + Sbjct: 69 YNSQVVHDEYLESGRPIGTICCGINNISCPGLRENALIPDDIVPVIPLYHHYATVEKLMS 128 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 + ++ Q + + + Y E + + L+ I Y++ N Sbjct: 129 SVFTVINQHAVEGPA--MAQLLTQVVLKYIEGNVLLRTGNDAIQRHENLLDSIKSYIDRN 186 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN---TELSQA 249 + E I L+ L+ KF S Y+ HEF + Y SP++Y+I+RR+ EA+ LT Sbjct: 187 FYEPIRLDTLATKFNVSPYYVSHEFKRRYGYSPMDYLIKRRLGEAQSLLTTDKGGREKIT 246 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 I++RVG+ N+ HF F VG +P YR+ ++ Sbjct: 247 SIAYRVGFSNLSHFQNYFKNKVGKTPGQYRKDYRKANY 284 >UniRef50_C4G7L2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G7L2_ABIDE Length = 272 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 10/268 (3%) Query: 16 AGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 K+ + + W S H H TEL V GV F +++++Y D +++ Sbjct: 15 TTKSNLIYITYTKYENDWPSFMHTHP-FTELFLVTGGVGEFYVENNIYPLKKGDFILVNP 73 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS 135 H SD +P A+ F + N L+ I + + Sbjct: 74 NASHTEKSDEKNPLEYIAVAVDNFSLNLTDTNHLM-------FNCISKNPNIIKYMDSML 126 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 +K + ++ + + + + Y+++NY Sbjct: 127 AEQEGNKAYSDHICQNILEI--ILIEILRITKSDIDTEPTVNASKECFKLKKYMDSNYAS 184 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 KIT++ L+K + Y+ H F K + SPINY+ R+ AK L N++ S ++IS Sbjct: 185 KITIDDLAKLSNLNKYYLIHSFNKYFGSSPINYLCGIRIRAAKELLENSDYSISQISQST 244 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRRQFK 283 G+ + +F + F++ G SP YR + K Sbjct: 245 GFSSQSYFTQCFIKSCGLSPKAYRNRTK 272 >UniRef50_A6M2W7 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2W7_CLOB8 Length = 283 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 27 FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD-- 84 F +D + HH H++ E+IY+ +G + I+ Y DI++I G +H + Sbjct: 19 FFNDGYSNTPHHWHED-IEIIYLVEGTLKACINRDTYDLTQGDILIIGGGEIHCFFKEKK 77 Query: 85 -VNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV---IKTLFNELSVILPQ 140 N ++Y G ++ ++++P I G E+ ++ NE+ + Sbjct: 78 FSNRAVIQFRTSIYDNFLSGTKDTKIIKPMWNQSIHLTMGNEIHALMERHINEIINEYSK 137 Query: 141 SKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL--IKDILFYLNNNYREKIT 198 ++ + IL K +Y SE +K+ L + + Y++ NY+E+I Sbjct: 138 AEEGYKLIIKARLYDLAGILIRYMPKQSYSSEDLSREKERLKKMDSVFQYVDTNYQERID 197 Query: 199 LEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE 258 L+ +SK S Y F + ++ ++Y+ R+ +A+W + + + AEI++ G+ Sbjct: 198 LDDISKSIGFSKYYFTKFFKENTGVTFLDYLNNYRIKKAEWRIIEEDETIAEIAYNCGFN 257 Query: 259 NVDHFAKLFLRHVGCSPSDYRRQFKN 284 ++ F +LF VGC+P YRR KN Sbjct: 258 SIKTFNRLFKNIVGCTPMKYRRDNKN 283 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 100/240 (41%), Gaps = 4/240 (1%) Query: 44 TELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQG 103 + Y+ G F I+ Y + +I G + +D DP T G + Sbjct: 43 FLIHYIFSGKGSFEINGYTYNLESGQGFLISPGDIATYKADDKDPWTYAWVEFNG-RLSE 101 Query: 104 AEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYE 163 +Q+ PV + + K++++ F + +S+N+ L + + I +E Sbjct: 102 KFLHQIGLSSKTPVFSCKK-KDLLEASFQYIFDACKKSRNNNLLILSSLYHFLAMI--HE 158 Query: 164 NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRI 223 + KD I + ++ NY + + +++K + +Y+ F + I Sbjct: 159 ASAPEQTEKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRNYMSTLFKESVGI 218 Query: 224 SPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 +P Y+I RM +AK + N+ L+ EIS VGY + F+++F + G P +YR Sbjct: 219 TPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLFGIPPKNYRNSIN 278 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 43/256 (16%), Positives = 104/256 (40%), Gaps = 8/256 (3%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSL--YVAHADDIVVIERGRLHAVASDVND 87 DP G + + Y+ G F + ++ + + +D +D Sbjct: 28 DPWHHYGPTL-THNYLFHYILSGRGSFLENERHEAIQLGPGQGFLMPPNTVCSYTADQDD 86 Query: 88 PATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTS 147 P T C G + L + +I +I ++ + L I+ ++ Sbjct: 87 PWTYCWIEFNGLKAANFMRQAGLN--ANNLIFTPHKPMIISSIKDTLETIIRNHSQHESF 144 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 + + L + + F ++ I++ + Y+ ++Y + +++QL+ Sbjct: 145 LIAQLY---LLVDHLIRFSKHSPQQRPNEIHSFYIREAIHYIQDHYMDNPSVDQLADICH 201 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 + +Y F +E ++P +++ R+ ++ L +T S +I+ ++GY N +F+ F Sbjct: 202 LNRNYFTRLFKQELHMTPSQFILTYRINQSCELLASTNRSIRDIADQIGYSNQFNFSSAF 261 Query: 268 LRHVGCSPSDYRRQFK 283 R G +P ++RR+++ Sbjct: 262 KRVKGMTPMEWRRRYR 277 >UniRef50_C4Z3B4 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3B4_EUBE2 Length = 291 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 96/258 (37%), Gaps = 12/258 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 E H H NE ELIY+KKG ++D V +A DIVV+ G +H++ + +D Sbjct: 35 EVPLHWH-NEMELIYIKKGCMIVSVDLEYSVVNAGDIVVVMPGHIHSIIQNESDSCEYEN 93 Query: 94 CALYGFQFQGAEENQ----------LLQPHSCPVIAAGQ-GKEVIKTLFNELSVILPQSK 142 + + + PVI+ + +E I Sbjct: 94 ILFNLDMLVSRQCDYDTVSFFNGIAGFNGYCPPVISKTAPHYSDLIHYIDEADNICKYFP 153 Query: 143 NSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 + + L + + K +K +L Y+ N+ I++E++ Sbjct: 154 DGYRLKIRACLFNFFFELNAHFYTHTDMPVHLSDDKMDKLKLVLNYIEKNFARAISIEEI 213 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 ++ S S+ F S I Y+ R+ A L T ++ G++N+ + Sbjct: 214 AQWCHFSQSHFMKFFKNCTGTSFITYLNDYRLIIAARILKTTTQPVIIVASDCGFDNISY 273 Query: 263 FAKLFLRHVGCSPSDYRR 280 F + F G SP ++R+ Sbjct: 274 FNRKFKEKYGVSPREFRK 291 >UniRef50_C4Z9T9 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z9T9_EUBR3 Length = 276 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 10/283 (3%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M R F+ +E LS A + W S H H + TE+ ++K G R I++ Sbjct: 1 MSNRKFNLDNEVQPEI-HFRLLSISASKFENDWTSFPHSH-HFTEIFFIKDGTGRMLIEN 58 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 ++ +VVI H SD +P + G + +E + + + A Sbjct: 59 ESLPVSSNSLVVIGAQVTHTEFSDPENPLDYYVLGVEGLKLNTDKEPEYIH------VPA 112 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 I+ F + + ++ + ++ + + ++ Sbjct: 113 SANSPFIRQCFENILREMHNKQDRYAEICQHYLDILILYFCRKDHVSYEVVDAQNSSRE- 171 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 + ++ +NY+ I+L+ L++ S Y+ H F + Y SPI Y+ + R+ A+ Sbjct: 172 -CHKVKRFIEHNYQSMISLDSLAENCSLSKYYLSHRFAELYGKSPIAYLNEVRLASARDL 230 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 L T S EI+ +G+ + +F++ F ++ SP +R+ + Sbjct: 231 LLTTNHSIEEIAGCIGFSSTSYFSQSFQKNFHESPQQFRKSHR 273 >UniRef50_C7G9X0 Transcriptional regulator, AraC family n=3 Tax=Lachnospiraceae RepID=C7G9X0_9FIRM Length = 303 Score = 201 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 119/293 (40%), Gaps = 17/293 (5%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTI 58 ++ D G + + K++ H H +E E +Y +G A I Sbjct: 9 FKITTDETLRETIQHGNNRYPFAYYPDNIWKFDFHRIDWHWH-HELEFLYTAEGTALCLI 67 Query: 59 DSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 +S H + I G LH + + T ++ E + + + + PVI Sbjct: 68 GTSKIELHKGCGIFINSGVLHRFEAQSS---TFAPNIVFSPTLLAPENSLIYEKYILPVI 124 Query: 119 AAGQGKE----------VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNA 168 ++ + + L +++ I +++ ++ F + ++ + Sbjct: 125 SSSVPYQVFSPSNTFGKQVLQLLSQICTIQETKPDNELCTIQLLFQLWNILQKNMDWTSD 184 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 S K ++ ++ Y++++Y E+ITLE ++ S S H F SP+ Y Sbjct: 185 SNSIHRLNHKQARLQAMMQYIHDHYMEEITLETIAASASISKSGALHIFQTGIHCSPVAY 244 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +IQ R+ +A L T+ S + I+ G+ + +F + F ++ SP++YR++ Sbjct: 245 LIQYRLAQAAEQLYITQKSVSSIAEETGFTSSGYFCRKFRQYYHMSPNEYRKR 297 >UniRef50_C6J998 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J998_9FIRM Length = 311 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 55/290 (18%), Positives = 117/290 (40%), Gaps = 17/290 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWES---GHHVHDNETELIYVKKGVARFTID 59 + D + G + ++ + + ++ H H E E +YV+ G I Sbjct: 9 KILTDEEFMEIKQHGSSDYPFQYYYDNLELFDFHCIEWHWHR-EFEFLYVESGEVTCGIG 67 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 + + + I LH + + +F E + + + + P+I+ Sbjct: 68 EKQIILSEGEAIFINSKILHRFYAPSGG---IIPNFVCMPEFIAPENSLIYKKYILPIIS 124 Query: 120 AGQGKEVIK-------TLFNELSVILPQSKNSQTSSLWDA-FAYTLAILYYENFKNAYRS 171 + + + + + I+ N + L L + +YEN K + + Sbjct: 125 SNIYFQRFQTDELWQTKIIQTMIKIMEIQGNEKIRELATLALMQDLWLTFYENVKLSDKG 184 Query: 172 EQGYIKK--DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYV 229 + + + ++ I+ Y++ NY ++L++++ S S + F + +P+NY+ Sbjct: 185 DVQTVDEVAQKRVQLIMQYIHENYNHNLSLDEIASHIGISKSTALNLFHRFLHTTPVNYL 244 Query: 230 IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 I R+ A W L NT I++ G+ NVD+F +LF + +PS+YR Sbjct: 245 IGYRLQAASWLLKNTNKKVKTIAYESGFHNVDYFCRLFKKRYHLTPSEYR 294 >UniRef50_Q65MB5 Probable transcriptional regulator n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MB5_BACLD Length = 281 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 55/281 (19%), Positives = 108/281 (38%), Gaps = 7/281 (2%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 F+A + + + + HVH+ EL Y+ G + I+ S+Y A Sbjct: 3 HPKYFIAEHSFSIQYMQRKGFTEMNAP-HVHEG-YELYYLLSGERTYFINQSVYTAEKGT 60 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCP-----VIAAGQGK 124 +++I LH +S + + + P + + + + Sbjct: 61 MIIINPHDLHRTSSTEVQEFERILINFSHDFIEPLLKCSHYRLLPFPENQNFIAFSLREQ 120 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 ++ + E+ K + L +Y + D I + Sbjct: 121 AAVEHMLMEMKKECKLKKEGHEDVVRALLFQLLFTIYRSLAGGGRNQTRPLHPMDEKISE 180 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 I Y+N +++E +TL+ L+ +F S SY+ F K Y+ R+ EAK L +T Sbjct: 181 IASYINCSFQETMTLDGLAGQFYISPSYLSRVFKKVTGFHLQEYIRHIRIREAKKRLRDT 240 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 + +I+ G++++ HF K+F VG P YR++ ++ Sbjct: 241 DEKILDIAADTGFKHISHFNKVFKEIVGIPPLQYRKKSRDI 281 >UniRef50_C9KIY1 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIY1_9FIRM Length = 298 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 111/290 (38%), Gaps = 13/290 (4%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 D + + G D + H HD E E I G + + Sbjct: 11 DKNQKEITRHGSVLFPVACYEDDMACTDVPIHWHD-EFEYILAFNGTIHLHVGTEPITLR 69 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV-------IA 119 ++I G LH+V+ + P+ + ++ G+ ++ Q P Sbjct: 70 QGAGILINAGLLHSVSHSLRKPSILRSLVVHPDLIAGSPQSCYWQKLVLPFYGRQNLPFL 129 Query: 120 AGQGKE----VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 +G E I L + Q + T A + L IL +N ++ + Sbjct: 130 LMEGNEPWHATIAHLMMHAWDAITQETEAYTIEARYALSKALHILC-QNLPSSPPTISRD 188 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 + +K +L Y+ +Y E I+ + L + S S + F K SP+NY+ R+ Sbjct: 189 VSLLERMKLLLQYIEQHYMETISNQTLMRLAACSESVLLRSFKKTVGTSPMNYLQNYRIQ 248 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 +A L +T+++ +EI+ G+ ++ +F K+F R G +P +R + Sbjct: 249 QASSLLLSTDMTSSEIAIATGFHDISYFTKIFHRTTGLAPQRFRAAHRTK 298 >UniRef50_B6FJS0 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FJS0_9CLOT Length = 313 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 102/280 (36%), Gaps = 15/280 (5%) Query: 15 VAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 ++++ + + H HD E + YV KG ++ YV + + I Sbjct: 34 FPVSMHTITKYDIFPNGRGFHDVHWHD-EIQFTYVSKGELTMQVEGREYVLKEGEALFIN 92 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAG-----------QG 123 G +H S D +++ Q + P + + Sbjct: 93 SGLIHVTTSISEDG-QYEGFMFPEKLLGFFPGSRMEQNYVLPYLKSNVLSVCVLYRESAE 151 Query: 124 KEVIKTLFNELSVILPQSKN--SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL 181 E I + L + +N + + + + Y+++ Sbjct: 152 DEKILSDIRNLRELFNNKENVTAFEYEVAVRMTAIWLQIVRNVSDTMQKMPACYLQRQER 211 Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 +K ++ Y+ +Y E ITL+++++ S+ F + +P++Y+ R+ L Sbjct: 212 MKKMMQYIVEHYHEAITLKEIAESASISIEECRRCFKDIIKETPMHYLSSYRVMVGMELL 271 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 T+L +I++RVG+ + +F + F + G +P YR Sbjct: 272 RTTDLDITDIAFRVGFNDSSYFIQAFKKKNGMTPKQYRNH 311 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 57/289 (19%), Positives = 124/289 (42%), Gaps = 15/289 (5%) Query: 18 KTPRLSRFAFSDDPKWE--SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 K RF ++ H H E E+ YV +G AR+ ID + + A DI++I Sbjct: 16 KHLLPYRFFHNEVKNGRPDILFHWHP-ELEVTYVCEGTARYHIDYDFFNSQAGDIILIRP 74 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQG-----------K 124 +H++ + T + + +Q+ + P+ + Sbjct: 75 NGMHSIHPIAKEKHITDNFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGY 134 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 + IK ++ + + L + +LY+ + ++ Y +K+ I+ Sbjct: 135 DDIKACLFDIFSLAKEESRHFEILLKSKLHEFIYLLYFHRYVVKKNTDDTY-RKNEKIRQ 193 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 ++ Y+NN+Y + +T++ LS+ S ++ F + S +VIQ R+++A L ++ Sbjct: 194 LIDYINNHYSDNLTIDFLSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHS 253 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILS 293 EI+ +G+ N+ +F + F R+ +PS YR+++ + +++ Sbjct: 254 TRPILEIANEIGFNNLSNFNRQFKRYYNLTPSQYRKKYTKPKESRTLIN 302 >UniRef50_A3CL13 AraC-type DNA-binding domain-containing protein, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CL13_STRSV Length = 282 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 49/263 (18%), Positives = 99/263 (37%), Gaps = 6/263 (2%) Query: 26 AFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV 85 + G V D + V +G +++ + Y V+ G+ +D Sbjct: 25 YSKTEAHHSFGPAVRDVYV-IHIVLEGRGTYSVGNQRYDLQEGQGFVVPPGQSVFYQADR 83 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 +P + L G ++ LQ +E +F L S + Sbjct: 84 EEPWSYVWMGLGGRLLPRYLQDLGLQS-GQWSFELTSLQEFKALVFESL--AYEGSGITA 140 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 +L L +L + + +E + + ++ +L L+++ E +++++L++K Sbjct: 141 ELALQRQVYRFLELLSQRLKQTSLITESRRV--NPYVQQVLELLSSHLPESLSVQELAQK 198 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 SY+ F E Y R+ A LT ++LS EI+ + G+ F+K Sbjct: 199 LALHPSYLSRLFKDEVGKGIKEYSNDLRLNMAADLLTGSQLSVEEIANKTGFAGTQSFSK 258 Query: 266 LFLRHVGCSPSDYRRQFKNCFAE 288 F + G SP ++R+ + E Sbjct: 259 AFKKARGQSPLNFRKASSHLGQE 281 >UniRef50_B0MHX9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MHX9_9FIRM Length = 306 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 105/304 (34%), Gaps = 21/304 (6%) Query: 4 RCFDNASETLFVAGKTPRLSRFAFSDDPK----WESGHHVHDNETELIYVKKGVARFTID 59 + N S+ P + + H H E EL Y++KG + Sbjct: 7 IQYKNNSKEELFPDFGPDFPYTCSYVEFDRCIGGQIPWHWH-KEIELFYIEKGTLEYDTP 65 Query: 60 SSLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 V ++ LH+ S D G + L Q + P Sbjct: 66 GGKIVFPEGSGGMVNSNILHSTKSLDPKKDTIQLDHIFDSSLISGQHGSLLDQKYILPFT 125 Query: 119 ------------AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 + K ++K L + L + L A + L + Sbjct: 126 GSPQAEILSFYPRTPKEKRLLKLLRDSFF--LSPHEFGYEILLRSALSKLW-CLMLSLSR 182 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 ++ D IK ++ Y+ ++Y EK+T+ +++ S F + I+P Sbjct: 183 PLLGQKKPQSGSDQKIKSMMEYIQDHYSEKLTVPRIALAAYISERECFRIFRQSLGITPS 242 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCF 286 YV R+ +A L++ LS + I G + +F K F +GC+P +YR +++N Sbjct: 243 EYVKNFRIRQACIMLSDPSLSVSYIGQSCGLGSSSYFGKTFREVMGCTPREYRCKWQNPD 302 Query: 287 AEQE 290 +Q Sbjct: 303 IKQR 306 >UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW55_9CLOT Length = 286 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 91/244 (37%), Gaps = 6/244 (2%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 + + +V +G +T++ + +I +D DP C G Sbjct: 41 RDFYLIHFVMEGGGVYTLNGRKHPVRKGQAFLIYPSMPIDYQADAADPWEFCWVGFNGND 100 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + P PVI E ++ L + + + A Y L Sbjct: 101 ARLLMNATGFTP-QNPVITLK-DPERMEELLMNIYRC--RGHHPHEFINMTAKLYELLAF 156 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 + + ++ + ++ ++ ++Y++ IT+ ++ S + F Sbjct: 157 LIQEASDPMPAQSRTGVEH--VQRACDFIASHYQDPITINDIAGHVGICRSRLYRVFKAH 214 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ISP+ Y+ + R+ EA + + + E+++ G+ + +F+ +F + +G SP +Y + Sbjct: 215 LSISPLQYLTEFRLREACNLMNRQKATVKEVAYAAGFSDPLYFSTVFKKSLGQSPKEYMK 274 Query: 281 QFKN 284 K Sbjct: 275 SSKG 278 >UniRef50_UPI0001787F16 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001787F16 Length = 280 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 109/281 (38%), Gaps = 7/281 (2%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESG-HHVHDNETELIYVKKGVARFTIDSSLYV 64 D + S S + H H EL Y+ G + +D +++ Sbjct: 2 IDRLQPKYHIGDHN--FSIQYMSRNGSSSMPRPHEHP-YFELYYLLNGERVYFMDDNVFT 58 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALY--GFQFQGAEENQLLQPHSCPVIAAG- 121 D++++ LH+ AS + A LL + +I Sbjct: 59 VKKGDLMIVNPHDLHSTASSEKLLFERVLIGFSRTFIEQGDAGVANLLDHGTSRLIRIPL 118 Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL 181 + + I+ L + + + +S + L L+ ++ + Sbjct: 119 KHQPEIERLLHSMLAECQTEQTHYSSLVRSLMNELLIRLHRIETTLQSQTHEYEHPMHQK 178 Query: 182 IKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSL 241 I +I Y+ +N+ EK+TLEQ++K+F S SY+ FT+ YV R+ EA+ L Sbjct: 179 ISEIAQYIKSNFHEKLTLEQVAKQFYISPSYLSRVFTRLTGFHFREYVQVVRIREAQKML 238 Query: 242 TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++ S IS G+E++ HF K F + G +P YR++ Sbjct: 239 VSSRDSVQIISELAGFEHIAHFNKTFKKIAGTTPLQYRKRH 279 >UniRef50_B1BNT9 Transcriptional regulator, AraC family n=4 Tax=Clostridium perfringens RepID=B1BNT9_CLOPE Length = 285 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 59/290 (20%), Positives = 115/290 (39%), Gaps = 14/290 (4%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFT--- 57 M + + ++ K + + DP G V N YV G +F Sbjct: 1 MSKFETYVFNNENYIDLK--PIQFGSEKCDPLHSVGPTV-KNNYLFHYVISGKGKFFSVD 57 Query: 58 ---IDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHS 114 + Y + +I + + SD NDP G + + E L P + Sbjct: 58 PKTFEKKYYEVSPGEGFLICPNEICSYQSDENDPWHYMWIEFNGIKAKLYMEEAGLTP-A 116 Query: 115 CPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 P+ + +K + E+ I+ +K + + + + + +++ F + Sbjct: 117 NPIFKLKESINSLK-IIEEMKSIISNNKKNPSFLIGHLYLFINSLI---EFSLNSTLNEL 172 Query: 175 YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 ++ I++ L ++ NY I++E +S + S SY F K +P ++IQ +M Sbjct: 173 DTLNELYIREALNFIEENYNRNISVEDVSNRCNLSKSYFTRIFKKHMNTTPQEFLIQYKM 232 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 +A L + LS ++++ +GY N +F+ F + SPS +R F N Sbjct: 233 LQACNLLKDKSLSISQVAELLGYSNQFNFSVAFKKKFNLSPSKWRTTFIN 282 >UniRef50_C2KWQ1 AraC family transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KWQ1_9FIRM Length = 311 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 89/252 (35%), Gaps = 6/252 (2%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 N L V GV ++ Y + ++ +D+ +P + + G Sbjct: 57 RNLYLLHVVYSGVGTLFVNGEYYHLSKGNAFLLYPHVEAWYEADLTEPWSYFWIGVRGVD 116 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL-WDAFAYTLAI 159 + L ++ IL + + L A+ + Sbjct: 117 ADSFFTEVGFSKE-----KPVGIVHQMDNLLLYINKILQKQDYTIEEQLSRSAYMHLFFA 171 Query: 160 LYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTK 219 + + YL+ +Y E I++ L+K+ +++ + F K Sbjct: 172 NLLRGKQEEAHWGGPLKDLGSHSARVRAYLDEHYHEDISISALAKEMGIHRAHLFNSFKK 231 Query: 220 EYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 + SP Y++ RM AK L T S AEI++ VGY + F+K+F + +G SP YR Sbjct: 232 DTGYSPKEYLLYIRMQNAKAMLRRTGKSIAEIAYMVGYHDPLSFSKIFRQKIGVSPLQYR 291 Query: 280 RQFKNCFAEQEI 291 + +E Sbjct: 292 NMKEEMLYNRET 303 >UniRef50_B9IXY7 Transcriptional regulator, AraC/XylS family n=7 Tax=Bacillus cereus RepID=B9IXY7_BACCQ Length = 286 Score = 199 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 104/269 (38%), Gaps = 8/269 (2%) Query: 20 PRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 L D W S H H + TEL+Y+ KG F +++++ H Sbjct: 19 KLLYITKSKYDKDWHSTIHAH-HFTELLYITKGKGTFIFYKEEIPVQEHNLIIVNPNIEH 77 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILP 139 SD N P + G F E P + Q ++ +L + Sbjct: 78 TEKSDTNHPLEYIALGIQGLSFSSIE-----NPSPVTIHNYKQDQKNFLFYLQQLVEEVE 132 Query: 140 QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 + + + L + + N ++ I KD I+ I Y+ ++ E I+L Sbjct: 133 NHQEDYDLIIQNILEILLLKMMRKKSFNVEKTSTQKINKD--IEFIKNYIKQHFHENISL 190 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 + L+ + Y+ H F K +SPI Y+IQ R+ E+K L T S + IS G+ + Sbjct: 191 DTLASISHINKYYLSHSFRKFVGVSPIEYLIQTRIRESKILLETTNYSISNISTITGFSS 250 Query: 260 VDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 FA+ F R SPS YR + + Sbjct: 251 QSFFAQSFKRETNLSPSQYRNAINSSKNK 279 >UniRef50_A9KLS8 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KLS8_CLOPH Length = 277 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 102/268 (38%), Gaps = 9/268 (3%) Query: 22 LSRFAFSDDPKWESGH-HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHA 80 L DP + H+H N E+ Y+ G RF ++ +LY ++++IE G LH Sbjct: 7 LKITRIKRDPYFSMKDAHLH-NFYEMYYLLSGTRRFFVNDTLYNVSKGELILIEEGALHR 65 Query: 81 VASDVNDPATTCTCALY----GFQFQGAEENQLLQPHSCPVIAAGQGK-EVIKTLFNELS 135 FQ E +L+ S P + Q + E + L ++ Sbjct: 66 TTYISGGSHERICITFSKSFLQPLFQEFGEEAVLKCFSQPYVRIPQSRREYFEDLISKAH 125 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY--IKKDVLIKDILFYLNNNY 193 + + + N + Y D +++ Y+ +NY Sbjct: 126 REMMYQDTYSLYLASSHVYELILFILRLNSISKQDDITPYDASPDDQIMEKAAKYICSNY 185 Query: 194 REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISW 253 + +TLE+ + S +Y +F Y+I R+ EA L +T+L EI+ Sbjct: 186 QSPVTLEETAAYCNMSTTYFSKKFKAVTGFGFKEYLISIRIREASRLLLHTKLPITEIAL 245 Query: 254 RVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 G+ + ++F +F R G SP YR+ Sbjct: 246 LSGFNDSNYFGDVFKRMKGISPCKYRKN 273 >UniRef50_C8P2X0 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2X0_ERYRH Length = 273 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 11/267 (4%) Query: 20 PRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSS-LYVAHADDIVVIERGRL 78 L + D W S H H EL+YV +G F + ADD+++I L Sbjct: 15 KLLYIDSSRFDSDWHSTLHSHP-FAELMYVVRGSGYFRFADNLKLPIQADDLIIINPNVL 73 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVIL 138 H SD + G +F + ++ P ++ ++ + + IL Sbjct: 74 HTECSDAEGGLEYIVLGIDGVEF-------YTEQNAHPGVSIHNYEDYKHEILFYIKAIL 126 Query: 139 P--QSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREK 196 ++ + + + + L + + E + + YLN +YRE Sbjct: 127 EAGKTHDEMSELIVENLLRVLVLNTMRRTTSLLDVETSTGGDNKDCIFLEHYLNLHYREN 186 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 ITL+ L+ + Y+ H F ++ +SPI+Y++++RM EAK L NT+LS +IS VG Sbjct: 187 ITLDHLASLTFLNKFYLSHIFKEQTGLSPIDYLLRKRMIEAKKLLINTDLSITQISDIVG 246 Query: 257 YENVDHFAKLFLRHVGCSPSDYRRQFK 283 + + +F++ F SPS +R + K Sbjct: 247 FRSPSYFSQFFKNMECMSPSSFRNKHK 273 >UniRef50_A9KK32 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=A9KK32_CLOPH Length = 295 Score = 199 bits (507), Expect = 9e-50, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 114/294 (38%), Gaps = 16/294 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTID 59 Q + + + G ++ K+ESG H H E EL + KG +T++ Sbjct: 2 QIITNKFHKEMKEHGNDQFPFLISYERLSKYESGSFLWHWHP-EIELTLIVKGDMIYTVN 60 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 H + + H N + G E + + + P+ Sbjct: 61 DHPLHLHEGEALFGNVSSFHTGTKFENKDCEYISITFDPKLIYGYENSITYRKYVEPITQ 120 Query: 120 AGQGKEVIKTLFNE-----------LSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNA 168 + E + I + S + ILY N +A Sbjct: 121 NFSLSAIQLDYSEEWHNNIIEIIKEIIAIGQNKEASYELDILMRLQQLWKILYLHN-NSA 179 Query: 169 YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 + I+ IL Y++NNY K+TLE++++ S C F + ++S + Sbjct: 180 PAMTPYDKRNYDRIRSILSYVDNNYAMKLTLEEIAEHIHLCKSECCRLFKRYMKVSLFEF 239 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++Q R+ ++ L +++ S EI+ VG+ + ++++K+F + GCSP+ YR++ Sbjct: 240 ILQYRIEKSLNYLADSQYSIIEIANFVGFNDSNYYSKVFTKIKGCSPTKYRKKN 293 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 90/254 (35%), Gaps = 8/254 (3%) Query: 33 WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTC 92 + H H + E Y+ G + I+ +LY DI+ ++ G +H + Sbjct: 15 HMAESHWHTH-YEFYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPVNERV 73 Query: 93 TCALYGFQFQGAEENQLLQPHSCPVIAAG-----QGKEVIKTLFNELSVILPQSKNSQTS 147 T + G +E + + + ++ L + Sbjct: 74 TISFDGEYLDSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETGQDGFSPL 133 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFR 207 F L L + A + I+ Y+ ++Y+ ITLE++++ Sbjct: 134 MKKGCFYELLVSLSR--CQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLEEVAELSH 191 Query: 208 ASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLF 267 S +Y +F Y+ R+ EA L ++ S EI+ R G+ + ++F F Sbjct: 192 MSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDGNYFGDAF 251 Query: 268 LRHVGCSPSDYRRQ 281 + G SP +R+ Sbjct: 252 RKAKGVSPRAFRKM 265 >UniRef50_C9LQ90 Putative transcriptional regulator n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ90_9FIRM Length = 295 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 102/272 (37%), Gaps = 14/272 (5%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 ++ S + H HD E E IY+ G F I+ + A D + I + Sbjct: 26 ITTSTISSQAHLQMISHWHD-ELEFIYILDGKMDFHIEEKILTASRGDFLAIHASAMRRS 84 Query: 82 ASDVNDPATTCTCALYGFQFQGAEE--NQLLQP---------HSCPVIAAGQGKEVIKTL 130 A + ++ + N+LL P P + + L Sbjct: 85 APHNGEDCRFIRALIHPSLLTENQSVRNRLLSPLLGNTSRRCFLVPSASPDAPRR--GEL 142 Query: 131 FNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 E++ I + LA LY E + ++ Y++ Sbjct: 143 LREINRINEKHLPGFELESIGLLHILLARLYALFPPEKQTQEDMPGTDISAQRRMVAYIS 202 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 ++Y EKI+L ++ S S C F K + SPI+++ + R+ ++ L +TE S E Sbjct: 203 HHYPEKISLAGIAAAGSVSRSKCCQLFKKYMQQSPIDFLNRYRLEISRNLLDSTENSILE 262 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 I+ G+ + ++ K+F C+P+ YR + Sbjct: 263 IANACGFSSQSYYTKMFSEKFNCTPTQYRSRL 294 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 99/281 (35%), Gaps = 16/281 (5%) Query: 12 TLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 +F + S + D+ + H H + EL Y +G ++ Y D V Sbjct: 6 KMFQEDRNLPFSVYIAQDE---KFSWHCHKH-MELDYCSEGHCTIKVNGESYDCQPGDFV 61 Query: 72 VIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV----- 126 +I H + N + A + P I + Sbjct: 62 IIHTMEDHTLI--RNSDCKLLGVQMDLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVP 119 Query: 127 ----IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI 182 ++++ +E+ V + + + + L + + I Sbjct: 120 KGSLLESILSEILVEYQKKQPGYEMYIKGDILRLFSCLVRTKVIEIGERNVNF-QDLERI 178 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 K ++ Y+ + ++++ +K S + C F K + + Y R+ A+ L Sbjct: 179 KPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLI 238 Query: 243 NTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 T+ + I++ G+ +V +F ++F + G +P++YR++ + Sbjct: 239 TTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKKMR 279 >UniRef50_C1I2I2 Transcriptional regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I2I2_9CLOT Length = 295 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 103/261 (39%), Gaps = 14/261 (5%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H HD E E IY+ G A ID ++ D ++I G +H + N + Sbjct: 35 FYSHWHD-EMEFIYILNGSAEICIDFKIFSVTTGDFIIIPNGSIHYMIGKENSKISYVAL 93 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIA-----------AGQGKEVIKTLFNELSVILPQSKN 143 +G + P++ + G I FN + Sbjct: 94 VFNLSLIEGNTLDYSQINFVNPIMKNKLFFKNIIRTSNVGHAKIVNSFNNIIESYNNKSY 153 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK--KDVLIKDILFYLNNNYREKITLEQ 201 + + + ++ E + + + + Y K +K+++ Y+ NY+ I++++ Sbjct: 154 GFQLEIKGSLFSIFSTIFKEGYISLNLNSENYSDLIKVENLKEVIKYIQTNYKNPISIKE 213 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 L+ + S + F + + Y+ R+ +A L +T LS EI++ VG+ +V Sbjct: 214 LADIAQYSEYHFLRFFKAQTGKTCTQYINYFRIQKATLLLFDTNLSITEIAYEVGFGDVS 273 Query: 262 HFAKLFLRHVGCSPSDYRRQF 282 +F K F + + SP+ YR+ Sbjct: 274 YFIKTFKKFLSISPTKYRKSN 294 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 56/260 (21%), Positives = 99/260 (38%), Gaps = 9/260 (3%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS-----DVN 86 E+ H HD EL YV G +L A D+V+I +H D Sbjct: 28 NLEAKLHQHDA-WELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEE 86 Query: 87 DPATTCTCALYGFQFQGAEE--NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNS 144 A + E +L S K +++ + IL + Sbjct: 87 GHVRYLMVAFSHSLLERCIEVFPELRNRLSGVQFPTDALKFGLESS-RIIRRILSEINEM 145 Query: 145 QTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 A L +++ + + ++ I Y+ +Y I L+ +++ Sbjct: 146 DELERLSAMFRLLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAE 205 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + + S C F + ++ +V Q R+ A L NT+ AEI + VG+ ++ HF Sbjct: 206 EVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFV 265 Query: 265 KLFLRHVGCSPSDYRRQFKN 284 ++F +G SP+ YR+Q+KN Sbjct: 266 RVFTNTMGMSPTKYRKQYKN 285 >UniRef50_C6IVE8 AraC family transcriptional regulator n=2 Tax=Bacillales RepID=C6IVE8_9BACL Length = 289 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 11/255 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 P G VHD L V +G +T Y D VI L +D DP Sbjct: 32 HPNHRIGPSVHD-YFLLHTVFEGKGTYTWGGQEYSCRTGDTFVIFPEGLFTYEADSLDPW 90 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 AL G + + P PV+++G+ E ++ L+ L QS + SL Sbjct: 91 HYAWVALRGSGVLRQLADVGITPD-KPVVSSGE-PEELRELYARLRSSFRQSDHPHLESL 148 Query: 150 WD-----AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSK 204 + + E+ + E I D ++ + + Y ++I +E+L++ Sbjct: 149 EAAGWVTLLLHHFGVANREHLPRSAAKEPAMI--DRQVEQAIRWFQLQYPQQIGIEELAR 206 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 +++ F +SP Y+ + R+ +AK L L+ +I+ VG+ + +F+ Sbjct: 207 NLGYHRAHLFSAFKARTGLSPKQYLTKVRIEKAKELLA-GPLTIDQIASSVGFNDALYFS 265 Query: 265 KLFLRHVGCSPSDYR 279 + F + G SPS+YR Sbjct: 266 RQFKKSTGKSPSEYR 280 >UniRef50_A9KRL7 Transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KRL7_CLOPH Length = 283 Score = 198 bits (505), Expect = 1e-49, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 111/269 (41%), Gaps = 5/269 (1%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P + P++E H H E E+I + G R ++ + Y+ DD+ I+ G+L Sbjct: 17 FPIEYHYVDHTHPQYEMPFHWH-IEYEIIRILDGEFRLFLEGTEYLLKKDDVAFIKDGKL 75 Query: 79 HAVASDVNDPATTCTCALYGFQFQGAEENQLLQP--HSCPVIAAGQGKEVIKTLFNELSV 136 H S + + + + L+ H I K I + + Sbjct: 76 HGG-SPKDCTYECIVFDFNILRQRSFLTDTFLRKIAHQKISIYPVHNKTCITSPLITMFD 134 Query: 137 ILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK-DVLIKDILFYLNNNYRE 195 + + S+ + A L + + +K +K L + +Y + Sbjct: 135 AIRSEEEGYELSILGSLLLFFAALQKNEYYSKEEEYDLKSQKAIEQLKASLELIVTDYAK 194 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 +TL++LS++ S Y C F + +PI+Y+ R+ +A + ++ +E + +I++R Sbjct: 195 PLTLQELSRECGLSPKYFCRFFQEYTNRTPIDYLNYYRIEQACYQISQSEDTLTDIAFRC 254 Query: 256 GYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 G+ + +F K F ++ G +P Y+ +K Sbjct: 255 GFNDFSYFIKTFKKYKGITPKKYQMMWKE 283 >UniRef50_B8I1I4 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1I4_CLOCE Length = 285 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 14/279 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 + C +N + TL + + + H HD TE+ V G ++ ID L Sbjct: 5 EICAENFNPTLLY--------AYINMVNSESHVTLHTHD-YTEVKIVLSGYFKYIIDDKL 55 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ 122 Y +I++I G H L F+ EN L++P S PV Sbjct: 56 YEVAKGNIIIINPGVQHEKIIPSGVKVEEFNYGLTNIHFKELPENFLIEPSSLPVFTLPL 115 Query: 123 GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG-----YIK 177 + I NE +++ + + A+L+ N R+E+ + Sbjct: 116 YQPEIIKCINETINEQEKNEPYCDLFIKSSIMKLTALLHRGMTANKERTEKTRLDIQTSE 175 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 K ++ DIL YL+ NY E+I+L +++ S YI F +E SPIN++I+ R+T+A Sbjct: 176 KTNIVNDILEYLSTNYMEQISLYRIAHNMYLSPVYISKIFKEETGESPINHLIRIRLTKA 235 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 + L + + ++ VGYE+ +F+KL+ ++ G PS Sbjct: 236 RELLMSGNMPIKTVARSVGYEDAFYFSKLYKKYYGIPPS 274 >UniRef50_A7VVL0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVL0_9CLOT Length = 282 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 99/256 (38%), Gaps = 8/256 (3%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 P G V D+ + Y+ G + S Y A D ++ RL +D +DP Sbjct: 35 PGHTWGPAVRDHFL-IHYITSGKGVYDSGSGKYSLSAGDGFLVVPNRLITYWADQSDPWE 93 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 G + L P+ + + L N L ++ S + + Sbjct: 94 YYWVGFNGTDAERLVCEAGLSAEQ-PIFHYDKDSLYREKLLNIYR--LNGNRPSDQARMQ 150 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 +A + + + GY +K L +++ NY I ++ ++ S Sbjct: 151 AGLLSFMAAMMDRRPLDIQEKKSGY----EYVKKSLQFIDYNYSRSIDVDDIAANVGISR 206 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 S++ F K + P Y+ + R+ +A L ++ LS E ++ G+ + +F+++F ++ Sbjct: 207 SHLYRLFMKHISVPPNEYLTRYRIQKASLLLESSNLSVGEAAYSTGFSDQLYFSRVFKKY 266 Query: 271 VGCSPSDYRRQFKNCF 286 G SPS Y ++ Sbjct: 267 KGLSPSQYSKRSHEKK 282 >UniRef50_B1HRT8 Hypothetical transcriptional regulator (AraC/XylS family) n=2 Tax=Bacillaceae RepID=B1HRT8_LYSSC Length = 294 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 112/288 (38%), Gaps = 9/288 (3%) Query: 3 QRCFDNASETLFVAGKTPRLSRFA---FSDDPKWESGHHVHDNETELIYVKKGVARFTID 59 + L + G + D H H E + +Y+K G A++ + Sbjct: 7 HIKIAKDLQELTLHGSKEFPVALYETTMNMDSMDFLPLHWH-KEIQFVYLKSGCAKYRVG 65 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 +++ V + + I LH + A + G + + + + P + Sbjct: 66 ANVLVLEEGEGLFINTSELHEAKPFQMEHAIVYCINVDPIIIGGHDGSIFMTNYVQPYLT 125 Query: 120 AGQG-----KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 + + + ++ IL + + +W Y ++ ++ + Sbjct: 126 THRQPYLKLTKELTQKVACMADILQKQEAFYQLKVWRELLYIWEVMLTQSLLTEEIVDPS 185 Query: 175 YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 I + K +L +L+ +Y++KITLE L+K S + F K ++P Y++Q R+ Sbjct: 186 IIVQQERAKAMLNFLHTHYQQKITLEDLAKHVYLSRAECSRYFKKVIGLTPFTYLLQYRL 245 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++ L + E + I+ G+ V ++ + F + G SP YR++F Sbjct: 246 RKSIELLRDDEQNVTIIAANTGFSTVSYYIEKFKEYTGYSPHVYRKKF 293 >UniRef50_C6D5P5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D5P5_PAESJ Length = 276 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 98/272 (36%), Gaps = 6/272 (2%) Query: 14 FVAGKTPRLSRFAFSDDPKWESGH-HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 F ++ H H + E+ + G F I V H DIV+ Sbjct: 4 FQYDNGEGTFSVSYRKARSHNMPVSHFH-STYEIFCLMSGKREFFIKDRTLVIHEGDIVI 62 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAG----QGKEVIK 128 I LH + ++ +L P S Q + I+ Sbjct: 63 ISPNILHRTTNTETPEHERLIVNIHEKHMAAGSYVDVLHPLSEREYLIVKCTLQDRLAIE 122 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 T+ + + + K L I ++ + + I +++ Y Sbjct: 123 TMLQTMIAEMSEKKPGFELYALTLALQLLLICCRHAKSSSMETLESPSPMHERISEVVRY 182 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 +N++Y +++L L++KF S Y+ F + + + Y+ R+ EAK L + + Sbjct: 183 MNSHYMNELSLHLLAEKFYVSPYYLSRFFKEATGFTFVEYLNSVRIKEAKKLLEQSSMKV 242 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 I+ RVG+ +V HF ++F G P YR+ Sbjct: 243 NLIAKRVGFGSVTHFGRVFKSVTGYVPLHYRK 274 >UniRef50_A6BDP1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A6BDP1_9FIRM Length = 321 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 100/312 (32%), Gaps = 36/312 (11%) Query: 3 QRCFDNASETLFVAGKTPRLSRFA---FSDDPKWESGHHVHDNETELIYVKKGVARFTID 59 Q + + + G + + + H H E EL + G + ++ Sbjct: 5 QILTEKNKKEVKEHGSYTFPVQVSPEAIQSYEQHSFMWHWHP-EIELTWFVSGQMEYVVN 63 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 Y+ + + LHA + + + G E + L + + + Sbjct: 64 DQRYIISEGEGIFCNSNALHAGYMIDDQDCNYISVTFHPKFIYGYENSILQTKYVDFITS 123 Query: 120 --------AGQGKEVIKTLFNELSVILPQ----------------------SKNSQTSSL 149 + + I + Sbjct: 124 NEFWSSLVLKPEIPWQNEIIEYIKEIYTLTCQVQSSSDAFIPGYEGIAEQPELPDYEFRI 183 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 LY ++ + K +KDIL YL + E+++LE ++ Sbjct: 184 HLLLCEIWHRLYL-HYVQIAQDTPHPQKHLQRLKDILSYLQEHASEELSLEDIAAHAGLC 242 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 S C F K R++ +Y++ R+ + L + E + I+ VG+ + ++ ++F R Sbjct: 243 KSECCRFFKKYMRMTIFDYLLSTRIQNSIPLLMDGE-NITTIAGLVGFSSPAYYGQIFKR 301 Query: 270 HVGCSPSDYRRQ 281 ++G SPS Y++ Sbjct: 302 YIGMSPSQYKKN 313 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 114/291 (39%), Gaps = 19/291 (6%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDD---PKWESGHHVHDNETELIYVKKGVARFT 57 M F +F + L + + + P G + N YV G Sbjct: 1 MSNVLFS-----IFPNERFVDLGLYQYGWEQCEPLHSYGPYA-RNHYLFHYVISGAGTLM 54 Query: 58 -IDSS----LYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQP 112 DS Y + + +I +++ ++D + P G + + A E L Sbjct: 55 STDSKGMTNTYHIKSGEGFLIHPKQVNTYSADRDHPWEYTWLEFDGLRVKEALELAGLT- 113 Query: 113 HSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSE 172 PV + +++ L NE+ I S S + + + Y ++ R Sbjct: 114 MDNPVYHSNA-RDLSLELKNEMLYIANHSDQSPFHLIGHLYLFL---DYLTRSSSSRRMM 169 Query: 173 QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR 232 +G +D I++ ++ N++ I++E ++ + SY F SP ++I Sbjct: 170 RGGKLQDFYIREATSFIEQNFQNDISVEDIAAFCNLNRSYFGKIFRDAVGKSPQEFLISY 229 Query: 233 RMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 RMT+A L TEL+ +I VGY + HF++ F + G SP ++R + K Sbjct: 230 RMTKAAELLKLTELTIKDIGNAVGYPSQLHFSRAFKKTYGISPREWRSENK 280 >UniRef50_B0A839 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A839_9CLOT Length = 303 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 100/274 (36%), Gaps = 15/274 (5%) Query: 17 GKTPRLSRFAFSDDPKWESG---HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVI 73 G F ++ +E G +H H E + +G + ++ +Y D + I Sbjct: 18 GDYTFPIDFDYNTLFAYEYGFLDYHWH-YEMTFSVILEGSMEYRVNDKIYEMKKGDGLFI 76 Query: 74 ERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHS--------CPVIAAGQGK- 124 LH N G EE+ + + CP Sbjct: 77 NSHTLHTAKGYNNKDCAFLALMFRPNFIFGHEESIIKTKYIDIIENGGQCPSFFFNSNNK 136 Query: 125 --EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLI 182 + I +L E + I + ++ + E V + Sbjct: 137 THQKIMSLVLEANDIFQNKGPCYELLVKSKVCEIWSLFFNEVSFILQEDNVSNSNDVVRL 196 Query: 183 KDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLT 242 IL ++++NY+ KITL+ +S+ S S C F K R +P Y++ R+ ++ L Sbjct: 197 SKILNFIHSNYKNKITLDDISECCNISKSECCRFFKKATRQTPFEYLLNYRIKKSIPLLL 256 Query: 243 NTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS 276 + + + EIS VG+ N ++ ++F R + SP+ Sbjct: 257 SDQYNITEISESVGFSNASYYTEIFKRVMDLSPT 290 >UniRef50_D1PQZ7 Transcriptional regulator, AraC family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQZ7_9FIRM Length = 296 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 46/293 (15%), Positives = 100/293 (34%), Gaps = 16/293 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFS---DDPKWESGHHVHDNETELIYVKKGVARFTID 59 D+ F D P H H E+ + GV + + Sbjct: 2 SIVLDHQLREQIPPDILDFPVAFYSDELADLPDRAGPVHWHP-YFEIATAQSGVLDYQVG 60 Query: 60 SSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA 119 + D + + + LH + ++ E + + + + PV+ Sbjct: 61 QTHIRLEPGDSIFVNQNMLHGIRQLSGAAPDPLPILVFSGTVVAPEHSAVYRKYIQPVLG 120 Query: 120 AG--------QGKEVIKTLFNELSVILP---QSKNSQTSSLWDAFAYTLAILYYEN-FKN 167 ++ + + ++ + ++ + L ++ Sbjct: 121 CSTLPFVVFRHDSDLWQAVRQQIHRACDAMRERPACYELTVQRSLCSVLEAIFRHLDSLP 180 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 S + + + ++ +L YL +Y + +TL ++ S S F SP+ Sbjct: 181 PLPSSRVQLTAQIRLQKMLSYLYEHYAQPVTLADIAAAAHISRSEAGRCFQAYLGCSPVE 240 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +IQ R+ A L T+++Q EIS G+ +V +F + F + GC+P + R+ Sbjct: 241 ALIQYRLQRAWRMLQETDMTQQEISLACGFHSVQYFRRQFRKRYGCAPGEKRK 293 >UniRef50_C7G755 Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G755_9FIRM Length = 302 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 9/275 (3%) Query: 14 FVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVI 73 P + ++ H HD E E+IYVK G+ +I Y+ A D V+ Sbjct: 24 HGTKDNPFSIYHIENAGRSFQIPVHWHD-EFEIIYVKSGLLTVSISGESYIGKAGDAFVV 82 Query: 74 ERGRLHAVASDVNDPATTCTCAL----YGFQFQGAEENQLLQPHSC-PVIAAGQGKEVIK 128 G LH + S T F+ +++LL+P + ++ + K+ K Sbjct: 83 SPGNLHLMGSQTGT-VDYFTFLFPLKYISFRTDDMLDDKLLEPLNSGHLMINPRVKDSAK 141 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFA--YTLAILYYENFKNAYRSEQGYIKKDVLIKDIL 186 L +L I + S + L E +K + E ++++ K+++ Sbjct: 142 ELCEQLIDIYMAENDETESKITAQIKTKIILLQFILEMWKKGFVIENDTSGRNIVEKEMV 201 Query: 187 FYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTEL 246 Y+ N+ KI+L++ ++F S YI F + + I+ Y+ R+ AK L +T+L Sbjct: 202 SYIQQNFTGKISLKEFGEQFHLSEKYISRYFKEHFHITLSQYITYLRLENAKQLLQDTDL 261 Query: 247 SQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 S E + + GY+NV +F + F + G SP YR Sbjct: 262 SVTETAMQSGYQNVSYFIRSFKKAYGISPLKYRNS 296 >UniRef50_Q5WCU1 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WCU1_BACSK Length = 308 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 17/307 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAF--SDDPKWESGHHVHDNETELIYVKKGVARFTI 58 M+ + D E L S+ + + H HD EL+Y G AR + Sbjct: 1 MFTQL-DAYKEQLPSGNDIREPIHCHMQTSEPNRRIASPHFHDA-IELLYSFSGRARVFV 58 Query: 59 DSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 ++ D+V+I +HA+ + + L + + P Sbjct: 59 SGQPFLMEKGDLVIINSNEVHAIWGESGEKVEYLVIKLDPEVLYSTSRSIFESKYVFPFT 118 Query: 119 AAGQGKE-----------VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKN 167 + + VI +++ ++ + ++ Sbjct: 119 MSKSSPQTLLKSGEMASTVIPATIAKINDEFSHKDYGYDFAIRIHICTIFLAVLRHWRQS 178 Query: 168 AYR--SEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISP 225 +E L++ + L ++Y +T +Q + S SY + S Sbjct: 179 GISVGTESINDSDFQLMRQVFQLLESHYATALTAKQAAATCNLSYSYFSRKIKSITGRSF 238 Query: 226 INYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 + R+TEA+ LT T+LS E++ VGY + +F + F + SP ++++ + Sbjct: 239 TELLNYIRITEAEKLLTTTDLSITEVAVSVGYSSTSYFIQHFKQAKHLSPLRFKKRLQQS 298 Query: 286 FAEQEIL 292 ++ Sbjct: 299 VFDKNET 305 >UniRef50_UPI000178AA6A transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA6A Length = 285 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 102/265 (38%), Gaps = 8/265 (3%) Query: 24 RFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS 83 R F + HH H++ E++Y G A S+ + A D++VI R LH S Sbjct: 22 RCEFDGRGQVLFNHHWHEH-LEILYFVSGEATLECGSTTFTAKEGDMIVINRNELHYGLS 80 Query: 84 DVNDPATTCTC---ALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTL--FNELSVIL 138 + +L A E + + P + + L + L Sbjct: 81 QSDHLFYYALIADFSLLQSHSLDAPEMKFITPITQNRLIFENRISGADALAPMLSIIKEL 140 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ--GYIKKDVLIKDILFYLNNNYREK 196 + + ++ L +L ++ +K I Y+ +YRE Sbjct: 141 ERQEFGYELAIKSELYRLLTLLLRGYVATVLTQDEYVERMKNVERFAPIFKYIEEHYRED 200 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 +++EQLS S + F + + YV + R+ A + L + L+ +EI+ G Sbjct: 201 LSVEQLSGMAGLSRFHFSRLFKEISGRTVTEYVNETRLNRADYLLRESPLTVSEIAAATG 260 Query: 257 YENVDHFAKLFLRHVGCSPSDYRRQ 281 + ++ +F++ F ++ +PS R++ Sbjct: 261 FNDIYYFSRTFKKYKRMAPSALRKK 285 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 53/255 (20%), Positives = 101/255 (39%), Gaps = 8/255 (3%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFT--IDSSLYVAHADDIVVIERGRLHAVASDVNDP 88 P G + + Y+ G F D Y A +I + + +D DP Sbjct: 30 PLHSFGPTMKQHYL-FHYIISGSGTFYDTSDQREYHLTAGQGFLISPDAICSYEADEKDP 88 Query: 89 ATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSS 148 T G + + L I + + +++E+ IL Sbjct: 89 WTYIWLEFDGLKTEHFLRQAGLSKEQ--PIFSQREMPTSSPVYHEMKQILALHHQKSALV 146 Query: 149 LWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRA 208 L + + ++ + S + K+ I++ + ++ NY + I+++ L++ Sbjct: 147 LGHLYLFISCLI---DCSLTKTSSKHDENKEFYIREAINFVERNYEKAISVDDLAQVCNL 203 Query: 209 SVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFL 268 + Y F ++ ISP ++IQ R++EA L NT + EI+ +GY N +F+ F Sbjct: 204 NRHYFSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAFK 263 Query: 269 RHVGCSPSDYRRQFK 283 RH SP+ +R+ K Sbjct: 264 RHYQISPNRWRKIHK 278 >UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8 Length = 286 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 111/289 (38%), Gaps = 15/289 (5%) Query: 8 NASETLFVAGKTPRLSRFAFSD---DPKWESGHHVHDNETELIYVKKGVARFTI------ 58 + +F + + F DP G V N YV G R Sbjct: 3 DFKSYIFNNINYVDIILYQFGSERCDPLHSFGPTV-KNHFLFHYVLSGKGRLYSFNKGTQ 61 Query: 59 -DSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV 117 DSS+Y A + ++ ++ +D +DP G + Q E L + + Sbjct: 62 NDSSIYTIKAGEGFLLTPNIINTYEADKDDPWNYVWVEFEGLKAQRYLEEIGLSSKNL-I 120 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 + ++ + L +L ++ L + + A+L +F N ++ Sbjct: 121 FTPKEYNNDDNSIKDNLMFLLNNPSAPDSAILGHLYLFFYALLENSSFNN---TKSASNL 177 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 ++ +++ + Y+ NY I++E ++K SY F + +P ++I+ R+++A Sbjct: 178 QEFYVREAINYIEKNYNNNISVENIAKWCNLDRSYFGKIFKNSMKTTPQEFLIKYRLSKA 237 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCF 286 L + +S EIS GY N HF++ F SP +R Q K Sbjct: 238 CEMLKDNNISIREISELTGYPNQFHFSRSFKEVYNMSPRQWRNQNKTKL 286 >UniRef50_Q0SVP8 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=Q0SVP8_CLOPS Length = 284 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 106/289 (36%), Gaps = 14/289 (4%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSD------DPKWESGHHVHDNETELIYVKKGVA 54 M ++ +++ ++ K P G V N + Y+ G Sbjct: 1 MKTLEYNESNKHKYLELKEKNSLDLYLGYCGMEKCLPSHSYGPAV-RNNYLIHYIIDGEG 59 Query: 55 RFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHS 114 + ++ Y + +I L + ++P T A G + + L + Sbjct: 60 TYYVNGQSYRLRKNQGFLICPNTLTYYKASKDNPWTYMWIAFNGIKAKKYLNYANLNEDN 119 Query: 115 CPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQG 174 +I + ++ N + L + S + L+ L S + Sbjct: 120 --LIFEYTEDDSLEIYINRMF-ELNRMNYSNELEIQGLLYLFLSKL---AMSKNENSLKS 173 Query: 175 YIKKDVLIKDILFYLNNNYREK-ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 D ++ + ++ NNY + + ++ + SY+ H F K ++SP +++ R Sbjct: 174 NNISDFYVEKAIEFMQNNYLNPDLKITDVANFVGLNRSYLTHLFKKSLKLSPQEFLLNYR 233 Query: 234 MTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 + EA L NT LS IS +GY + F+K+F + G SP YR F Sbjct: 234 INEATSLLKNTNLSVGTISKSIGYNDQLTFSKVFKKVKGISPKTYRDNF 282 >UniRef50_C6JEQ5 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ5_9FIRM Length = 301 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 12/257 (4%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 +E + +V G ++ + + VI +D +P T G + Sbjct: 45 RDEFIIHFVLDGTGFYSAGGQTWSLTPGQMFVIYPNEPVTYGADETNPWTYAWIGFRGIR 104 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + + + A Q K + + +L + S+ + L L + Sbjct: 105 AHSMVKECGFSKNQLVLPAPDQ-----KIILKHIDYMLNHKQLSKANDLRRQAYLILLLA 159 Query: 161 YYENFKNAYRSEQGYIKKDVL-----IKDILFYLNNNYREKITLEQLSKKFRASVSYICH 215 F ++ K ++ + Y+ + Y++ I + ++ S +Y+ Sbjct: 160 ELAGFHEKQSAQNKKNAKYAYSTSVYVELAIEYIKDMYQKGIGISDIADNIGISRAYLNS 219 Query: 216 EFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSP 275 F KE +S ++I +M +A L +T LS EI+ VGYE+ F+K F + G SP Sbjct: 220 SFQKELGMSAQTFLIDYKMHKAASLLVSTSLSVKEIANNVGYEDQLVFSKAFKKKFGMSP 279 Query: 276 SDYR--RQFKNCFAEQE 290 +Y+ ++ + F E++ Sbjct: 280 KNYKTHKEMMDKFNEKQ 296 >UniRef50_C6D3L6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3L6_PAESJ Length = 305 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 105/304 (34%), Gaps = 23/304 (7%) Query: 10 SETLFVAGKTPRLSRFAFSDDPK-----WESGHHVHDNETELIYVKKGVARFTIDSSLYV 64 + + + F F +P H H+ EL+++K+G + + + Sbjct: 1 MSDVLKSDQHLESEHFLFHIEPYELKQGTMIPLHRHE-FVELVFIKQGSGLHEYEGNTFP 59 Query: 65 AHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE------NQLLQPHSCPVI 118 A D+ +IE G HA + ++ + + + + P + Sbjct: 60 ITAGDVFIIEPGMDHAYTVEQSEGMEVVNVLFVPALLERELAVLSGVTSFIDFYYMEPFL 119 Query: 119 AAGQGKE-----------VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKN 167 + + I+ + +L ++ + IL N Sbjct: 120 RSDVSFQAKLTLSPRQMMDIRGILEQLMKEYGNKESGYQFLIKSKLIELFIILSRIYANN 179 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 S +I I ++ + ++LEQ+S+ S S F + +S + Sbjct: 180 RNHSLPSIQNDGEMIARICEFIKRHQAHPLSLEQISQMAGMSQSKFTLLFRQMTGMSFVE 239 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 + +R+ AK L + A I+ GYE++ HF +F + G +PS YR++ K Sbjct: 240 FRNDQRIQLAKQLLAASSDKIARIALDTGYEDLSHFNHVFKKLTGETPSLYRKRMKGRSE 299 Query: 288 EQEI 291 E Sbjct: 300 SGEP 303 >UniRef50_Q5WL10 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WL10_BACSK Length = 298 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 108/302 (35%), Gaps = 21/302 (6%) Query: 9 ASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 L P + + + + ++E H H+ E ++V G + D Y Sbjct: 4 FDPKLQKEPYYPVVKFYYYKEWRQFEMKFHSHEAA-ECMHVLSGSCKVETDEGSYQLKKG 62 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCAL--------YGFQFQGAEENQLLQPHSCPVIA- 119 I+ ++ G H + ++ + F+ +EN+ L + Sbjct: 63 QIIFLDAGTRHRLIV--SERCRMFNVEFSFEQGCTAFPPFFKLCKENRALGNMVNKQASQ 120 Query: 120 -AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 + L + + + + L Y ++ + Sbjct: 121 LLLHDTDDTYQCLRRLILEVDKKSEQTDFMV-----QLLLSEYLIRIAELAEAKVAEPDQ 175 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 +K L Y++ NY ++++ ++ Y+ F S ++I R+ +AK Sbjct: 176 QAYVKRALAYIHQNYDREVSVADIANSVHLHPGYLQRVFKAFTGKSIHEFLISYRINKAK 235 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK---NCFAEQEILSEF 295 L T++S +I +G + +F+ F +HV C+PS+YR++ + N + E + + Sbjct: 236 AMLKQTDISITDIPHYIGMNSQQYFSTTFKKHVKCTPSEYRKRHQYNDNLRRKSEDIIQS 295 Query: 296 PQ 297 + Sbjct: 296 AE 297 >UniRef50_B7CB27 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB27_9FIRM Length = 291 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 14/280 (5%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 F+ A L ++ D +W S H H TE+ YV KG ++D+ Y Sbjct: 26 FNKARPKLLYITESKF--------DHEWNSTLHTH-LYTEIFYVTKGHGLLSLDNKNYPV 76 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 DD+V++ H N + G + EE++ C + + K Sbjct: 77 KEDDLVIVNPLISHTERGIENVNFEYIVMGIEGVTYFSKEEDE---EQGCSIANYYEYKH 133 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 + + + S + L L N S KD ++ I Sbjct: 134 EVLFYLKTILFEVKTKDTEYQSLCQNLLEVLLINLMRRANINLKSSPINKANKDCVL--I 191 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 Y++ +++E ITL+ LS+ + +I H F + ISPINY+IQ+R+ EAK L+ T Sbjct: 192 EKYIDAHFKEDITLDTLSELTFLNKYHIVHAFKQYKGISPINYMIQKRLEEAKLLLSTTN 251 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 L +EI++ VG+ + +FA+ F + SP YR+ + Sbjct: 252 LQISEIAYIVGFTSQSYFAQAFKKATLTSPLQYRKDNSHS 291 >UniRef50_UPI00019737F8 L-rhamnose operon transcriptional activator n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019737F8 Length = 305 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 50/272 (18%), Positives = 100/272 (36%), Gaps = 12/272 (4%) Query: 28 SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVND 87 + H H EL Y++ G ++ V A ++ LH + Sbjct: 35 DYYRERFVPWHWHRA-IELFYIESGEIQYCTPHKTAVFPAGTAGMVNSNVLHMTKIRSHR 93 Query: 88 PATTCTCA-LYGFQFQGAEENQLLQPHSCPVIAAGQ--------GKEVIKTLFNELS--V 136 G + + + Q + P+I A Q + L + + Sbjct: 94 EKNIQLIHIFDPKLLAGGQGSLIEQKYITPLITAPQIEILALYPDQPEQSALIDSIRGAF 153 Query: 137 ILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREK 196 +L + ++ +A + L +F + Q + +K ++ Y++ +Y EK Sbjct: 154 LLAERDFGYEINIREALSKIWVQLCKISFALLQDNPQRENRTADKVKQMMVYVHEHYTEK 213 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 I++ +L+ S F ++P Y+ R+ A L ++++ E + G Sbjct: 214 ISIPELAGCVFLSERECYRAFQNCLHMTPAEYIKSYRLQMACQILADSQMPITEAGYACG 273 Query: 257 YENVDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 N +F K+F GC+P YRR+++NC Sbjct: 274 LGNASYFGKVFREFAGCTPLQYRRRWQNCDKT 305 >UniRef50_A8RIS8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RIS8_9CLOT Length = 285 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 113/284 (39%), Gaps = 12/284 (4%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGH-HVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 E + A KT ++ + + H+H NE E+ Y+ +G + ID Y Sbjct: 1 MEQILYAEKTDGIAIDRIRREAAFTMPCKHLH-NEYEIYYLLEGQRYYFIDRRTYHVTGG 59 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE-------NQLLQPHSCPVIAAG 121 +V I+R ++H + +L F + +S + Sbjct: 60 SLVFIDRNQIHQTSQAGPGSHERILISLDQNPFSDFLAFTGEMSLEGFFRRNSGILNLDK 119 Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ---GYIKK 178 +G+ + + L + + L + K + + + S K Sbjct: 120 EGQNLAEYLLDGAAKELHEKKPGFRHITMSKLSQLFILAQRHMSGPSSLSADLPLSTQPK 179 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 + ++ Y+ ++Y + ++LE ++ F + Y+ F + + Y+ R+ A+ Sbjct: 180 HRKVDEVASYIIDHYDKALSLEIIAAHFYVNKCYLSRIFKEASGFTVNEYINMIRIRRAR 239 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 L+NT +S E+S VGYE + +F ++F ++ SPS YR+Q+ Sbjct: 240 ELLSNTSMSITEVSESVGYETITYFERVFHQYTQTSPSGYRKQY 283 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 196 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 56/296 (18%), Positives = 104/296 (35%), Gaps = 15/296 (5%) Query: 7 DNASETLFVAGKTPRLSRFAFSDD---PKWESGHHVHDNETELIYVKKGVARFTIDSSLY 63 + E + G + P H H E E +YV +G F S Y Sbjct: 9 NGNLEEITCHGSPAFPMEVYLDNLDLYPNRFIPWHWH-KELEFVYVLEGTIEFQTGVSTY 67 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTC---------ALYGFQFQGAEENQLLQPHS 114 V + ++ LH V+ + L G + + L +P + Sbjct: 68 VIGSGQGGLVPSNMLHMVSPYHRQHGSIYCAVLADSYLLHGLSGGLIEEQYISALFRPET 127 Query: 115 CPVIAAGQG--KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSE 172 G + +E+ L IL+ Sbjct: 128 DFFFLDGTSPWHAGVLACIHEMYQCDCSRPRGYLWKLQILVQQAGLILFENLDMKQEPCP 187 Query: 173 QGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR 232 + + ++ L Y++ Y ++ LE +++ SVS C +F + SP++Y+I Sbjct: 188 SVHDSRYQRVRCCLEYIHKEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISY 247 Query: 233 RMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAE 288 R+ ++ L +++ S EI+ VG+ HF+ F R++GC+P YR+ + Sbjct: 248 RVRMGEYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTPLYYRKHLMEDRED 303 >UniRef50_B0P929 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P929_9FIRM Length = 279 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 49/255 (19%), Positives = 101/255 (39%), Gaps = 10/255 (3%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 +P + G + D+ + +V G +T D + A D +I + ++D DP Sbjct: 31 EPLYAWGPGLRDHFL-VHHVIVGRGVYTADGVTHDVKAGDTFIIYPSVVVTYSADAADPW 89 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 C G + + PV+ Q E + ++ I S +++S L Sbjct: 90 EYCWVGFNGAEARLMIAQTPFTR-QRPVVRFEQPDE----IREAIADIYRASGTTRSSEL 144 Query: 150 WDA-FAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRA 208 Y L E + ++ + ++ +NY I +E ++ Sbjct: 145 RAIGMLYIFLALLIEQAGAPAPA---AGLSLEYVESAIRFIAHNYSGHIDIEAVAASVGI 201 Query: 209 SVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFL 268 S S++ F + P Y+ + R+++A L ++ L + ++ VGY++ +F+++F Sbjct: 202 SRSHLYRVFMQHISTPPNEYLAKFRISQACELLGHSSLPVSAVAASVGYDDPLYFSRVFK 261 Query: 269 RHVGCSPSDYRRQFK 283 R G PS Y + + Sbjct: 262 RITGMPPSAYIKAHQ 276 >UniRef50_B1QXT7 Transcriptional regulator, AraC family n=3 Tax=Clostridium RepID=B1QXT7_CLOBU Length = 289 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 112/282 (39%), Gaps = 15/282 (5%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 + F + + L K+ + W S H+H E+ ++ +G F ++ S Sbjct: 10 DKNFSDFNFELLYITKSKF--------ENDWHSTAHIHP-FMEIFFITEGNGSFQLEDST 60 Query: 63 YVAHADDIVVIERGRLHAVASDVN-DPATTCTCALYGFQ--FQGAEENQLLQPH--SCPV 117 D+++I LH S++N P + F F + Q + V Sbjct: 61 VNVKEYDLIIINPNCLHTEKSNLNTSPLEYIVLGIDNFSINFFNLNNEKFSQSDSKNYHV 120 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 I + +I N + + + + + + + + Sbjct: 121 INLKKNSSIILNQLNLIIDEIKLKNYKYEVACKSMLSLFILNILRTIPSMSILQNEKKNL 180 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 I YL+++Y E ITLE LS + + H FTK+ +SPI+Y+I++R+TEA Sbjct: 181 NLE-CAKIKNYLDSHYSENITLETLSNLSYMNKFSLVHAFTKQIGMSPISYLIEKRITEA 239 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 K L T S +I VG+ N +F+++F + SP Y+ Sbjct: 240 KSLLETTNYSIKDIGSIVGFSNSSYFSQMFKKQTNLSPKQYK 281 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 6/241 (2%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 + +LIY+ G RF + + +VV G+ + D G+ Sbjct: 66 DFQLIYITGGKGRFRFHNETIEVPSGSLVVYTPGQPQHYSYQAEDGTEVYWIHFTGYSAY 125 Query: 103 GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY 162 + L + PV G + + LF ++ L + + + L +L Sbjct: 126 DYLQQFGL--LTQPVHTVGIIDD-VTALFKKIIQELNSHRPLGSHMVNAYLLEMLTLLGR 182 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 E G + I ++ +++ Y E +++ L+ + SV H+F + Sbjct: 183 RL---QTAEEPGAQGRHPDINQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKEVTG 239 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQF 282 ++P+ Y+ + R+ EAK L+ + L E++ VGY+N +F+++F VG PS+Y++QF Sbjct: 240 MTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYKKQF 299 Query: 283 K 283 + Sbjct: 300 Q 300 >UniRef50_UPI0001C36471 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36471 Length = 287 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 11/250 (4%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPAT 90 G + ++ KG F D Y+ D+ +I G +D DP Sbjct: 32 GSHSFGPA-RRAHYLIHFIIKGKGVFFADDKKYILKQRDMFLIRPGETTFYYADEVDPWE 90 Query: 91 TCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW 150 A G E+ PV E+I+++ + + + +N Sbjct: 91 YAWVAFVGSDAAQITESCGF--AYSPVATYPDSPELIESIDDIIHHMQTGDENDY----- 143 Query: 151 DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASV 210 L ++Y K ++ Y K+ +++ + + ++Y EK+T++ L+ + R Sbjct: 144 -YLLSRLYNIFYYLSKPVINTQNTY--KNEIVRRTVNLIRSSYFEKLTIQWLADQVRVDR 200 Query: 211 SYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRH 270 +Y+ F +E I P Y+ Q R+ A L+ T S EIS+ G+ + F+ F ++ Sbjct: 201 TYLYRLFKEEVGICPKEYLTQYRIRMATVMLSTTNQSIKEISYACGFTDTSLFSICFKKY 260 Query: 271 VGCSPSDYRR 280 +G +P +R+ Sbjct: 261 LGFTPQQFRK 270 >UniRef50_C6LM61 Putative raffinose operon transcriptional regulatory protein RafR n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM61_9FIRM Length = 252 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 94/245 (38%), Gaps = 3/245 (1%) Query: 49 VKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQ 108 V++G + + Y D+ +I G +D P + G + E+ Sbjct: 2 VQEGRGYLEMGEAHYTLEKGDVFLIPEGVEAWYEADKETPWSYRWIGFEGVSARECLESA 61 Query: 109 LLQPH--SCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFK 166 P V + I + + +++ + + L FA + Sbjct: 62 GFTPQKPVRKVRCLDKVGGYIDQMLK-CHQLYYENELKRNALLMLVFAELITDNRKNLAG 120 Query: 167 NAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPI 226 + V ++ + Y+N NY +++ + +L+ + SY+ F + SP Sbjct: 121 MGKYPSEHRYPSSVYVEHAIEYINENYSKRLRINELADYIGVNRSYLTSSFQENIGCSPR 180 Query: 227 NYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCF 286 Y+++ RM +AK L N ++ E++ VGY + F+K+F G SP +Y+ + Sbjct: 181 EYLMKLRMEKAKTLLKNPDIQVNEVAAMVGYTDPLAFSKIFKSRTGRSPKEYKEEKSRLV 240 Query: 287 AEQEI 291 ++ Sbjct: 241 VGKKK 245 >UniRef50_B2TRB4 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=B2TRB4_CLOBB Length = 305 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 74/303 (24%), Positives = 118/303 (38%), Gaps = 30/303 (9%) Query: 11 ETLFVAGKTPRLSRFAF--SDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + + G F + SD HH HD + ELI++KKG + ID +V H + Sbjct: 7 KEIKKHGTAYFPCAFYYTESDSENLIVKHHWHD-QLELIHMKKGEFQVEIDMDKHVVHEE 65 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA--------A 120 I I LH + S N P + + P++ Sbjct: 66 TICFINSEELHFIKS--NHPCKESAIVFDLKMLSFDMFDSIQGSLIQPLLNGELKMPHFI 123 Query: 121 GQGKEVIKTLFNELSVILP----------------QSKNSQTSSLWDAFAYTLAILYYEN 164 + + + + E S IL K S + + LAILY N Sbjct: 124 FKKDKHGEEILKEYSEILEAYKISGQISQNPEGNITEKLSSQIKIKASLLKILAILYENN 183 Query: 165 FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 ++ + IK + Y+ NNY EKI ++ LSK+ + Y C F + + Sbjct: 184 LLIKENNKNKDY-RVEYIKTAISYIQNNYSEKIHIKDLSKQINMNEQYFCRFFKRMIGKT 242 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 P+ YV + R+ +AK L T +I G+ N+ +F K+F +H G +P YR+ F N Sbjct: 243 PMEYVNEYRIKKAKELLRETNRQVMDICLECGFHNMGNFIKVFKKHTGINPMKYRKNFIN 302 Query: 285 CFA 287 + Sbjct: 303 KKS 305 >UniRef50_C6LH72 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LH72_9FIRM Length = 294 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 109/280 (38%), Gaps = 8/280 (2%) Query: 8 NASETLFVA-GKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 + SE L P + +E+ H H + E IY+ G + I+ + Sbjct: 10 DFSERLHYNLAGFPLYIKKDKLSRYGYEALCHWHPD-LEFIYIIDGAMDYFINGNRIPIR 68 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE------NQLLQPHSCPVIAA 120 ++ + RLH S + T ++ F + + Q + I Sbjct: 69 QGQVIFVNSRRLHYGFSRQKEECTFIALVVHPSLFTNSFDKAWIFAEQKFGFANVDYILL 128 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV 180 K + + I + + + L S + + Sbjct: 129 DSHISWQKKMIEGIDRIYREINAASFNPLRLLAEAISICADAGEHIETMESSGKHNVTQM 188 Query: 181 LIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWS 240 ++ Y+ NNYREK+TL++++ S C F + R+SP+ Y+ + R++++ Sbjct: 189 AFLNMTEYIQNNYREKLTLDKIAGAGAVCRSKSCQLFRQYVRMSPVAYLTKYRLSKSAEL 248 Query: 241 LTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 L +TELS +EI+ G+++ ++ LF + G +P +YR+ Sbjct: 249 LRDTELSVSEIASLCGFQSPSYYINLFKKETGQTPLNYRK 288 >UniRef50_A6TKQ3 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TKQ3_ALKMQ Length = 282 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 48/283 (16%), Positives = 100/283 (35%), Gaps = 14/283 (4%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSL 62 FD + + + + + H HD + E+ Y+ G + I + Sbjct: 5 NIDFDYPDRSFHFSAR-EVFGHYTMLSN-------HFHD-QYEIYYLLSGERHYFIKDRI 55 Query: 63 YVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA-----EENQLLQPHSCPV 117 + + +V+I R +H + + L ++ + Sbjct: 56 FHVKSGTLVLINRQDVHRTTDADTQDHVRVLLNFSKDYLLSSPYVIALLDGLFMNNNYVI 115 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 ++ ++ L +++ + +L L N + + Sbjct: 116 PFLSAEQQYVEVLLDKMIHEIEHQSTGFQVALQALLMDLLVYTSRYIESNRHDVLAPPSQ 175 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 I I+ Y+N NY+ +TL +++ F S Y+ F + + + Y+ R+ EA Sbjct: 176 VHEKISQIVQYINTNYQTPLTLSSVAQNFFVSQYYLSRTFKQATGFTFVEYINNIRIREA 235 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + L T +IS VG+ ++ HF ++F SP +YRR Sbjct: 236 QRLLRETNHKVIDISEAVGFGSISHFGRVFKEVTRFSPLNYRR 278 >UniRef50_B7AP83 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AP83_9BACE Length = 278 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 105/285 (36%), Gaps = 22/285 (7%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 + F K R + F + H HD EL+Y+ G + ++Y Sbjct: 2 NGTMSEYFNINKLIREAAFRMDET-------HSHDC-YELVYLFSGECNILVSHTIYRMV 53 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA------- 119 +V+I G +H + ND +F + + L + Sbjct: 54 PGTLVIIPPGEIHKTSYGSNDKVRQQR---TALRFSIKDTDWLCSALGKDFVKDNLTAGI 110 Query: 120 ---AGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYI 176 + KE I+ L + Q + + + I S Sbjct: 111 IEVPDKRKEYIENLITRMIYE-NQMPDELSMGMVKTLFQEFMIFVLRCKLYGDTSAHEID 169 Query: 177 KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTE 236 ++ I+D+ Y+ NNY ++I L+ ++K+F S SY+ +F + Y++ R+ E Sbjct: 170 AQNSTIQDVATYVYNNYDKQIYLDDVAKQFSISRSYLSKKFKQTTGFGFKEYLLNVRIKE 229 Query: 237 AKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 A L T S +I++ G+ + ++F F R G SP+ YR Sbjct: 230 ACRLLLETNHSITDIAFACGFNDSNYFGDAFRRIKGISPNKYRHN 274 >UniRef50_C9LCE8 Transcriptional regulator, AraC family n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LCE8_RUMHA Length = 287 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 19/289 (6%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 MY + + S + E +H HD E + G +F ID Sbjct: 5 MYDITEGDLNPEFLFT---------CVSTRTEEEQNYHAHD-FIEFAVIMGGKGKFYIDG 54 Query: 61 SLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTCALYGFQFQGAEENQL--LQPHSCPV 117 Y D +++ G H + + C A G F+G + + + + Sbjct: 55 KDYEVEEGDFILLNPGTYHRSKAGYSKEGLKECYIAFSGVSFKGCKSGYFPSFKGNGKII 114 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ---- 173 A + K+ I + ++ + + L L ++ E + E Sbjct: 115 KMADRMKKNIFQICTVMNKEARECSAGRYFMLKAYLIQILCLVVREQKEEKQEGEGKGYI 174 Query: 174 -GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR 232 K +++ I+ Y+ NYREKI+LEQ++ S YI F E +PINY+I+ Sbjct: 175 FQSTGKKYVVQQIMKYMEENYREKISLEQIAANMYLSSFYIAKIFKSETGDTPINYLIRL 234 Query: 233 RMTEAKWSL-TNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 RM +AK L + E E++ VGY + HF+KLF +H G SP Y++ Sbjct: 235 RMEKAKEILEISPEEPIKEVAAAVGYSDAYHFSKLFKKHYGISPLYYKK 283 >UniRef50_B6VVW1 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B6VVW1_9BACE Length = 288 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 55/279 (19%), Positives = 101/279 (36%), Gaps = 10/279 (3%) Query: 12 TLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIV 71 L A +P E+ H HD EL YV G +L A D+ Sbjct: 9 ELPEAENHSFFFI-DQRTEPSLEAKLHRHDA-WELYYVVHGQGNRMAGDTLQHFEAGDVA 66 Query: 72 VIERGRLHAVA-----SDVNDPATTCTCALYGFQFQGAEE--NQLLQPHSCPVIAAGQGK 124 +I LH +D + A + + E +L + + K Sbjct: 67 LIPPSMLHRWEYAADSADEDGCVRYLMVAFKHSLVERSMEVFPELRNRLADVMFPTDALK 126 Query: 125 EVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD 184 ++ + L + A L +++ + K ++ Sbjct: 127 FGPES-VRVIRKTLSEMNGMDELGRLSAMFRLLPVIFTSSDHIFAGKPMRIEKNVRRMQQ 185 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 I Y+ +Y I L+ ++ + + S C F + ++ +V Q R+ A L ++ Sbjct: 186 ICAYVMKHYVHSIALDDIAAEVGMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACDLLKHS 245 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFK 283 + +EI + VG+ ++ HF ++F +G PS YR+QFK Sbjct: 246 QKGVSEICYLVGFNDLPHFVRVFTSTMGMPPSKYRKQFK 284 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 55/286 (19%), Positives = 114/286 (39%), Gaps = 17/286 (5%) Query: 7 DNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAH 66 D++ L G + F D K + H HD E E+I + +G I +S +V + Sbjct: 11 DSSGRELLTYGTSDFPIAFFDDDLTKVKVPWHWHD-ELEIIIITEGSVSVQIANSSFVLN 69 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAG----- 121 + + G LH+ ++ + E+ + + + P+ Sbjct: 70 KGEGYFLNSGILHSAKLLSPKGHQRA--LIFSPEIAAHNEDIVWKTYIKPIFKKQALPFI 127 Query: 122 ------QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN--FKNAYRSEQ 173 + I L N++ + K ++ +++ +N Sbjct: 128 KLSPGISWQNSILRLSNDVWLTGAYEKTDYPITVRHNLTKVFSLIKSNIDLIENETEFTH 187 Query: 174 GYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRR 233 + ++ IK ILF++ NNY IT+ ++K S+S F + + +PI Y+I+ R Sbjct: 188 KTKQDELRIKKILFFIENNYSTTITIADIAKSGDISISSCLRLFKQILKTTPIQYLIKYR 247 Query: 234 MTEAKWSLTN-TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + +A + S +I++ G+ + +F + F + GC+P++Y Sbjct: 248 LQKAVEEFDSLEGRSIGDIAYSCGFSDATYFNRCFKKEFGCTPTEY 293 >UniRef50_UPI0001789C33 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C33 Length = 293 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 51/274 (18%), Positives = 101/274 (36%), Gaps = 17/274 (6%) Query: 19 TPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRL 78 P F + + H HD E+ YV++G ++ L D+ VI G Sbjct: 15 NPDFDIFINREVEGFCLSQHTHD-FIEISYVEEGSGYHYVEDQLIPIKRGDLFVIPIGTS 73 Query: 79 HAVASDVNDP------ATTCTCALYGFQFQGAEENQLLQPHSCPV-----IAAGQGKEVI 127 H D TC L + E +L + + Sbjct: 74 HVFRPSSQDNQLVIYNCIFRTCLLEQLKSVICESTKLHSLLYGSSPSAKWLQYQDKFDKF 133 Query: 128 KTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILF 187 ++ + + + + LA+L + S + D + Sbjct: 134 LSIMHGMFREYLKKGPRYEFLMMGQLIQVLAMLQRYECDGSMVSTPTNN-----MDDAIQ 188 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+N+++ +T++Q++++ S S+ F K ++ + ++ R+ L +TE+S Sbjct: 189 YINDHFATNLTVQQVAERSFMSPSHFQRLFKKTTGVTFMQFLQNIRVQRCCELLKSTEIS 248 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 E + +VGY+++ F LF + G +P +YRR Sbjct: 249 IQEAANQVGYQDMKFFHSLFRKKTGVTPREYRRS 282 >UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450D3 Length = 285 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 6/245 (2%) Query: 45 ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGA 104 EL+Y +G + ++ A + + H +D P + G Sbjct: 46 ELVYCLRGSGTVRVAGRVHRVKARGLYWVSCWHPHQYQADPIQPWELYWVRIEGPGLDAL 105 Query: 105 EENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN 164 LL+ PV K F + IL + +S+ A A L++LY Sbjct: 106 A--SLLRIRETPVFPL-LDDAATKACFMDAFNILESPSPNAPASMHVAVARLLSLLYENR 162 Query: 165 FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 FK+ + + ++ L + +Y + + L L+ SVS+ F + S Sbjct: 163 FKDGGQDTEPVPST---LERPLIRMRQHYADALRLSDLAHLAGMSVSHFIRTFKRTMGTS 219 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 PI+++ + RM +AK L +T+ EI+ + GY + F+K F + G P+DYR Q + Sbjct: 220 PIDWLRRERMNQAKHRLIDTDEPIKEIARQCGYRDPYFFSKDFKKLTGLPPTDYRVQERG 279 Query: 285 CFAEQ 289 E Sbjct: 280 RAHET 284 >UniRef50_C6L914 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6L914_9FIRM Length = 306 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 106/293 (36%), Gaps = 31/293 (10%) Query: 16 AGKTPRLSRFAFSDDP------KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 G +D + + HH H+ E E+IY ++G I+ Y + Sbjct: 15 HGTAAFPCACYQADSAASPAGTPFLAKHHWHE-ELEIIYFEQGCFHLEINMEKYEIEEEC 73 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGF--QFQGAEENQLLQPHSCPVIAAGQGKEVI 127 +I+ G LH + S+ + +L + +L+QP + ++ Sbjct: 74 FCLIKSGDLHYIYSEKDYREMAFVFSLSMLRAFAADPVQEKLVQPLAEGSLSLPGLIYRQ 133 Query: 128 KTLFNELSVILPQ--------------------SKNSQTSSLWDAFAYTLAILYYENFKN 167 F L Q S Q + A +N Sbjct: 134 NPCFVILKREFLQIADAAGLPSGASNLRSQYRVSSLPQYMRAKASLLNIFAAFSEQNL-- 191 Query: 168 AYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPIN 227 S+ ++ +K L Y+ + EK+T+++L+ + + Y C F K PI Sbjct: 192 LAVSQMPADRRVDTVKKTLSYMQEHMTEKVTMQELAAQANMNEQYFCRFFKKIIGRPPIT 251 Query: 228 YVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 Y+ + R+ A L T+ S EI+ G+ N+ +F + F GC+P YR+ Sbjct: 252 YLNEMRIRYACRLLKETDHSVTEIALESGFNNLGNFMRTFRLVCGCTPLQYRK 304 >UniRef50_C6CX81 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX81_PAESJ Length = 272 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 103/264 (39%), Gaps = 9/264 (3%) Query: 19 TPRLSRFAFSDD---PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIER 75 P + + P G + D+ ++ +V +G I SS + + + Sbjct: 15 NPDFYLSYWGKEDCSPNHAFGPGIRDH-YKVHFVHRGTGTVQIGSSTFKLTSGQAFLAYP 73 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS 135 G++ + +D DP + G Q E L K+ + L+ L Sbjct: 74 GKVISYQADAFDPWSYSWIGFRGEQVGEVLERTKLTSEESVF---PMDKQFMPNLYELLL 130 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 KN L L +L ++ ++ + K+D I L ++++++ E Sbjct: 131 ESADHPKN-HDLRLTSLLIEFLTVLI-DSLPSSADAGVQPRKQDTYIHRSLDFIHSHFSE 188 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 IT++Q++ Y+ + F + + P Y++ RM A L E S E++ V Sbjct: 189 PITVQQMAASLGLDRKYLSYLFKEAMGLPPQQYLLNYRMDRAGELLRKGEYSIGEVARSV 248 Query: 256 GYENVDHFAKLFLRHVGCSPSDYR 279 GY++ F+K+F + G P Y+ Sbjct: 249 GYQDALLFSKMFKKLKGVPPKLYK 272 >UniRef50_C7H3E2 Transcriptional regulator, AraC family n=4 Tax=Clostridiales RepID=C7H3E2_9FIRM Length = 306 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 6/265 (2%) Query: 24 RFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS 83 + PK + + +++YV G A F D V + +V+ + + Sbjct: 48 TYRLKKRPKLPTFWAKGRRDYQILYVASGKAHFWFDGVEEVVTSGHMVLYQPKEIQKYVY 107 Query: 84 DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKN 143 V D G+ + + P V +G + K LF ++ L Q + Sbjct: 108 YVEDHPEVFWIHFTGYDVKNILNYHGI-PLDKHVFYSGTLPDY-KMLFRKIIRELQQCEY 165 Query: 144 SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLS 203 + F L ++ + SE+ I+ + Y N NY K++++ + Sbjct: 166 GYEDYIASLFNIILFLVSRQQ----QESEKTTTSIPEEIEAAVAYFNENYNTKVSVDDYA 221 Query: 204 KKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHF 263 + S ++ F + +ISP Y++ RM A+ L NTE + EI+ VGY+N +F Sbjct: 222 ESLHISTNWFIRNFKQYMKISPAQYILSLRMVNAQSLLENTEYNIGEIAEIVGYDNPLYF 281 Query: 264 AKLFLRHVGCSPSDYRRQFKNCFAE 288 +++F + G SP+ YR+ + + Sbjct: 282 SRVFKKEYGVSPAQYRKNLEESTEK 306 >UniRef50_A8SUZ2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SUZ2_9FIRM Length = 298 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 53/296 (17%), Positives = 105/296 (35%), Gaps = 21/296 (7%) Query: 2 YQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSS 61 Y C D ++ F + H H E++Y+ +G A Sbjct: 4 YFECLDKLNKP-------YEAFLFDAQTSEMFPILPHWH-YFVEILYMVEGKAYVEAGEE 55 Query: 62 LYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQF--QGAEENQLL--------- 110 YV D++V HA+ S P G+ + Sbjct: 56 NYVLEPGDLIVFYPQMAHAIYSTGQLPIRYYVLKFDPAHLNISGSALPSISSLIAMAAVE 115 Query: 111 QPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYR 170 Q S +E +K L L + + + + +A + + ++ Sbjct: 116 QKLSVYFSKEKFNQEKMKQLIQGSVKALEEKQFGYDIIMHSNYCLLMAEILRIWKQEGFQ 175 Query: 171 SEQGYIKK--DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINY 228 ++ + ++ Y++ +Y+E +++ +L++KF S SY F + Y + Sbjct: 176 IKKRKKETVLSEKFTEVSEYISQHYQEDLSVAELAEKFHMSYSYFAAIFKEYYGQTCKEM 235 Query: 229 VIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 ++ R+ +A+ L T+ IS G+ + HF K F + G +P YR + K+ Sbjct: 236 ILTVRLQKAEDLLQFTDFDLTYISQETGFCDCSHFIKAFKQKYGVTPRKYRMKEKS 291 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 104/283 (36%), Gaps = 10/283 (3%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESG-HHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 E + ++ K D + H H E+ ++ G I+ S+Y Sbjct: 1 MEEILLSDKIKDYKIDFAERDADFHMDRFHYHP-YYEIYFLLSGNCSALINHSIYHLVPG 59 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYG----FQFQGAEENQLLQPHSCPVIAAGQG- 123 D V+I + +H D N F ++ L PV+ Sbjct: 60 DFVLIPQSAMHRFVYDCNSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYPVLHLTSLL 119 Query: 124 KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIK 183 + LF+ L + + + + L++L + I+ Sbjct: 120 QGNATRLFDTLYQETVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDLDSAENA---IQ 176 Query: 184 DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTN 243 Y++ +++E ++L ++ S +Y +F + + Y+ + R+ EA LT+ Sbjct: 177 ASARYISTHFQEPVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTH 236 Query: 244 TELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCF 286 T L+ EI+ R G+ + ++F F + G SP YR++ KN Sbjct: 237 TSLNVTEIAIRCGFNDGNYFGDAFRKEFGLSPLQYRKRQKNLL 279 >UniRef50_B8DFE8 Transcriptional regulator, AraC family n=18 Tax=Firmicutes RepID=B8DFE8_LISMH Length = 292 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 106/286 (37%), Gaps = 16/286 (5%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 SE L + +F ++ + H H E E+IY KG ++ + Sbjct: 2 SEYLEIPELNKAFPFRSFVNEGEVLVYPHWH-KEIEIIYALKGSLNLGVNDMPIQLKEGE 60 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV--- 126 I VI G +H + + L FQ + ++Q+ A +E Sbjct: 61 IQVINGGDVHYFLASPSSERVVIQFDLSLFQEEMQMDDQMQTLREMLTEMAHLSREWPEE 120 Query: 127 ----IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ--------G 174 +++L + K + L + ++Y E + + + Sbjct: 121 TVAKMQSLIMNIHEESSGEKPGKHYILKADLLAIIGLIYREIPQIKTQPDSVISEEAVLK 180 Query: 175 YIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 + + I Y+ +Y+E ++L++++ S Y F + ++ + ++ R+ Sbjct: 181 SQETLHKLDQIFSYVEKHYQEPVSLQEVANYTGFSTYYFTKFFKRNTGMTFVTFLNDYRL 240 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 +AKW L N E++ G+ +V F F R +G +P YR+ Sbjct: 241 NKAKWMLLNEAFPVTEVAELAGFSSVKTFHHAFKRAMGVAPLKYRK 286 >UniRef50_A9KTC0 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A9KTC0_CLOPH Length = 298 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 114/300 (38%), Gaps = 13/300 (4%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESG-HHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + ++ D ++ H HD E E+ Y+ +G + I+ Y+ Sbjct: 1 MRQIVFEESLNGITIDRIIRDYEYNMPTKHFHD-EYEVYYLLEGERYYFIEHQTYLVKKG 59 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCAL-------YGFQFQGAEENQLLQPHSCPVIAAG 121 +V + RG++H L + F H + Sbjct: 60 SLVFVNRGQIHKTGLAGTSYHDRILIELKEEPFASFFSFFGDLSLKDFFSKHYGVLELEE 119 Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYE--NFKNAYRSEQGYIKKD 179 + + I+ L +S + S+ A L + + K Sbjct: 120 KDQRRIERLLTSISTEIQNKSIGFEISVMMKLAKLLIFSMRCKADTNTFIPATTATTAKH 179 Query: 180 VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 + ++ Y+ NN I+L+ LSK F S Y+ F + + Y+ R+ +A++ Sbjct: 180 RKVDEVASYIVNNCTNPISLDALSKHFFVSKCYLSRIFKEVTGFTVNEYINIHRVQKAQY 239 Query: 240 SLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPV 299 L +E + +EIS ++G+E++ +F ++F ++ SP YR+Q + Q I ++ +PV Sbjct: 240 LLLYSESNISEISAQLGFESITYFERVFKKYTESSPLKYRKQNRK--EIQPIRTKKAEPV 297 >UniRef50_C4IBD9 Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IBD9_CLOBU Length = 302 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 104/297 (35%), Gaps = 19/297 (6%) Query: 3 QRCFDNASETLFVAGKTPRLSRFAFSDDPKWE---SGHHVHDNETELIYVKKGVARFTID 59 + D G D K+ H H E E + + KG ++ + Sbjct: 5 KVTVDANLLETTSHGNREFPMDVYRDDFSKYYTNIINWHWHP-EIEFVMITKGKIEYSTE 63 Query: 60 SSLYVAHADDIVVIERGRLHAVAS-DVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI 118 + D + I LH S D + + + E+ + + + P++ Sbjct: 64 EETLILREGDGIFINSNTLHMAKSIDGYQDSLMFSVVVSPKLIYNDTESIIYKKYVKPIV 123 Query: 119 AAGQG-----------KEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYY---EN 164 + ++ I + + + ++ + + + ++ Sbjct: 124 ECSKLSYLKLDKYNTWQKQILSHLLYIDALKFNEEHGFEFIIKNQISLIWQLIALNTSHL 183 Query: 165 FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 + + + +K +L +++ NY IT++ ++K S S F K Sbjct: 184 YLHNNCLINSHSLSQERLKQMLRFIHKNYFNNITIDDIAKSANISRSECFRCFKKMINTK 243 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 P +Y+ R+ ++ L T++ ++I + G+ + ++ KLF G SPS YR+ Sbjct: 244 PFSYLTDFRLEKSLQLLLETDIPVSDICYSCGFNHSSYYGKLFREKFGISPSSYRKS 300 >UniRef50_B2TM72 AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=B2TM72_CLOBB Length = 291 Score = 194 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 13/257 (5%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H H NE ELI V G I++ Y DI++I G LH ++ N+ +T + Sbjct: 36 HWH-NEIELILVLSGEFNLKINTDSYTCKDGDIILINSGSLHYFSTKENESSTWNSIVFN 94 Query: 98 GFQFQGAEENQLLQPHSCPVIAAGQG-----------KEVIKTLFNELSVILPQSKNSQT 146 Q + P+I +K + + Sbjct: 95 MDQLNSNILDNCSVNFITPIINNEFKLPVIIHKDSLINNELKCIILNIIDTYNSKYYGFE 154 Query: 147 SSLWDAFAYTLAILY-YENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 + ++L+ + K + +K IK +L Y+ NY ++I + +LS Sbjct: 155 LEIKSLIFKYFSLLFKFNLVKKKTNNTCLNEEKIEKIKIVLEYIQENYNKEIDINRLSAI 214 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 + S+ F K + I ++ R+ +A ++NT+LS EIS VG+ N+ +F + Sbjct: 215 CHYNQSHFMRFFKKHTGKTCIQFIKNYRLEKAASLISNTDLSITEISLEVGFTNISYFIR 274 Query: 266 LFLRHVGCSPSDYRRQF 282 F +P ++ + Sbjct: 275 SFKEKYNTTPKGFKTRL 291 >UniRef50_A0AET6 Complete genome n=16 Tax=Listeria RepID=A0AET6_LISW6 Length = 277 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 103/287 (35%), Gaps = 17/287 (5%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 M + + + H + E+ + G + I+ Sbjct: 1 MLKINTTTFNPQILYVAN----CYTNEVRIGDNH-----HHDFLEISIIYDGKVIYDIEG 51 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA 120 D+++ G H ++ F +G N P + Sbjct: 52 ERVELEKGDMLIFNPGVKHYDITEPGMTNAQLHIGFRNFTLEGYSRNTF--PFKKAFLRK 109 Query: 121 GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRS-----EQGY 175 + I ++ ++ K L + + E + Sbjct: 110 KEEDSAILSISKQIIEEKDAEKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDE 169 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 +K +L+ +I+ Y+ ++ E ++L LS+ S +YI F +E SPINY+I+ R++ Sbjct: 170 QQKQLLVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLS 229 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSD-YRRQ 281 A+ L N ++ + + VGY + +F+KLF ++ G PS+ +R+ Sbjct: 230 RAEELLKNKNITVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKS 276 >UniRef50_C6CVW1 Transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=C6CVW1_PAESJ Length = 294 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 108/283 (38%), Gaps = 17/283 (6%) Query: 14 FVAGKTPRLSRFAFSD----DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADD 69 F P + + + + H H+ E ++ KG I+ Y H Sbjct: 11 FPDETFPYIMYTHTIHRSIPEGRGFNDLHWHE-ELQITLATKGNLTIQINGIDYRLHTGQ 69 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPV-------IAAGQ 122 + I + LH + +D+ + ++ + + + P Sbjct: 70 AIFINKSVLH-IVTDLTAEGEYVSFNFPEKLLAFYSDSAMEKNYVLPFTNSYLLSFEIKG 128 Query: 123 GKEVIKTLFNELSVILPQSKN----SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK 178 E K + N L + + + + IL + S + K Sbjct: 129 DTEWQKQILNILWSMKKEFEIKKSWGWQYEISIKTVQLWLILISNISLPSEESSKHNRLK 188 Query: 179 DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAK 238 ++ +L +++ NY ITL++++ SVS F R++P +Y+++ R+ ++ Sbjct: 189 QERLQLMLSFIHQNYSNPITLKEIADAAHLSVSECTRSFKTSIRMTPYSYLVKYRINKSC 248 Query: 239 WSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 L +TE + EI+ RVG+ V+HF + F + + +P ++R+ Sbjct: 249 ELLQSTEYTITEIASRVGFNQVNHFIQAFKKDLKLTPKEFRKN 291 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 103/262 (39%), Gaps = 19/262 (7%) Query: 38 HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALY 97 H HD ++ YV KG T+ +Y DI VI LH+V+ ++ C Sbjct: 47 HCHD-YFQIWYVAKGAFLHTVQQQVYEIRKGDIFVIPPFTLHSVSISPDEDIEIYGCEFM 105 Query: 98 GFQFQGAEENQ----------LLQPHSCPVIAAGQGKEV-------IKTLFNELSVILPQ 140 + Q L+ + A + ++ + ++ + + Sbjct: 106 PSFVNERFQEQPTDHAFFDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYER 165 Query: 141 SKNSQTSSLWDAFAYTLAILYYE-NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITL 199 SL L+IL + N + + K ++ ++ +++N+Y+E + L Sbjct: 166 RTPFFQISLKAKLLVLLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNL 225 Query: 200 EQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYEN 259 L S S C F + + Y+ R+ +A L ELS ++ + G+ Sbjct: 226 NDLCSLSNLSRSTFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNE 285 Query: 260 VDHFAKLFLRHVGCSPSDYRRQ 281 + +F ++F ++ G SP+D+R+Q Sbjct: 286 LSYFCRIFKKYTGISPTDFRKQ 307 >UniRef50_UPI0001788B1F transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788B1F Length = 292 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 91/263 (34%), Gaps = 4/263 (1%) Query: 20 PRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 PR F H H+ EL YV G ++ S Y + + ++ H Sbjct: 18 PRAPVQVFHGIHPGTIPLHWHE-FYELSYVVGGEGEHRLNGSAYPLSSGTLFLLTPADFH 76 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQLLQ-PHSCPVIAAGQGKEVIKTLFNELSVIL 138 + S + P + L I + + Sbjct: 77 ELVSVEDKPLEIYNVIFTEAMMDDNLYHWLFGGKLVLHAQLEEMQHRQIFADYERMREET 136 Query: 139 PQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK--DVLIKDILFYLNNNYREK 196 S+ ++ L L + N G + +V ++ L Y+++++RE Sbjct: 137 GASREGSEIAIRATLQRLLVDLNRGSTANCALPTNGTGNRQLNVNLQRALIYIHHHFRED 196 Query: 197 ITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVG 256 + LE + + + S +Y F+K S Y+ RM A+ L + L EI + G Sbjct: 197 LRLEDAAAQAQYSATYFSECFSKSVGQSFQRYLQNVRMQFAESLLRVSSLPVTEICYASG 256 Query: 257 YENVDHFAKLFLRHVGCSPSDYR 279 + + HF ++F + G SP YR Sbjct: 257 FNTLGHFERVFRQRKGMSPRQYR 279 >UniRef50_C3X9W6 Helix-turn-helix domain-containing protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X9W6_OXAFO Length = 293 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 6/252 (2%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H++ + IYV +G A V I + +H+V + + Sbjct: 43 MHWHED-LQFIYVLEGEIEVRTLDEELKLAAGHGVFINKNVVHSVNQSGDCHYKSFIFPD 101 Query: 97 YGFQFQ-----GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWD 151 Y +F + L++ P+ G T+ + L + KN +++ Sbjct: 102 YFLRFYFGSPAEHLVDSLVENMDVPLCRFIPGIGWCDTVLSILRKLSFLEKNGNEFYVYE 161 Query: 152 AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVS 211 + ++ + S + ++ L Y+ +Y E I+L+ L+ S S Sbjct: 162 VLVFLTSLWLEIRKNVSLPSGKKEKPVSRRMQRFLAYIEKHYAEAISLDDLAGSGNVSKS 221 Query: 212 YICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHV 271 F + +P Y+++ R+++A L T+ EI+ G+ +F K F Sbjct: 222 ECLRCFRVSMQTTPYKYLVEYRLSKAAILLQETDKPVGEIASCTGFHQASYFGKCFREKT 281 Query: 272 GCSPSDYRRQFK 283 G SP DYR + + Sbjct: 282 GFSPRDYRGKNQ 293 >UniRef50_A6BIB0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB0_9FIRM Length = 285 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 51/256 (19%), Positives = 107/256 (41%), Gaps = 7/256 (2%) Query: 32 KWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATT 91 H H+ E+++ G R I+ + ++V + +H++ SD Sbjct: 26 NTHIPAHWHEA-MEILFCLNGSVRIHIEHEHLTLQRNQLIVFDSKEVHSIHSDSK-LYMF 83 Query: 92 CTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS--KNSQTSSL 149 + Q + L C ++ K +L+ L ++ +N TS++ Sbjct: 84 LCIHVDKKQLSVYCPDLELYHIKCRPVSLDDSKSTPYIHLCQLAHDLTRTNVENKNTSAM 143 Query: 150 WD---AFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKF 206 A ++ Y + + + G + + +++ I+ Y+N +Y EK++LE+++ + Sbjct: 144 RSDGTALLMLADLIRYFSVYSLPGTTTGTGQSNDILRKIISYVNEHYTEKLSLEEVANQV 203 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S Y C F + I+ + Y+ + R++ A L NT+ S +E+ G+ N F +L Sbjct: 204 GFSREYFCRFFKQHMGITFLRYLNEVRISHAGRILMNTDKSISEVMQESGFTNQTIFNRL 263 Query: 267 FLRHVGCSPSDYRRQF 282 F G +P R + Sbjct: 264 FKEIYGMTPRQARNSY 279 >UniRef50_Q03FA9 Transcriptional regulator, AraC family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03FA9_PEDPA Length = 298 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 113/274 (41%), Gaps = 7/274 (2%) Query: 19 TPRLSRFAFSDDPKW-ESGHHV-HDN----ETELIYVKKGVARFTIDSSLYVAHADDIVV 72 + + +D + ++ +H H + E LI+ G + ++ + IV+ Sbjct: 26 SKVIKLLYITDLGFYPKARYHFVHRDRGTEEWILIFCTHGKGVVKSATEEWLIESGSIVL 85 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN 132 + G+ H + +DP G + LQ + VI E ++ L + Sbjct: 86 LPPGKEHTYYAFDDDPWDIFWAHFNGDSVNEYIPQEALQGNGFLVIN-KTSTEDMQMLMS 144 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 + ++ + + L + Y + I + Y+ ++ Sbjct: 145 QFWQMIQALSAGFSYQSVFYSSQVLGATLAYVSLQSVLPHDSYTMGNEYITKAVKYIYDH 204 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 + EK++L L++ S SY+ F + S +++ +M +A + L +T L+ +I+ Sbjct: 205 FEEKVSLSTLTEVLDVSKSYLSRIFRQTVGTSVNQFILDIKMKQACYYLKDTNLAVHQIA 264 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCF 286 R+GY++ +F+++F + VG SP +R+Q KN Sbjct: 265 SRLGYDDPYYFSRIFKKVVGSSPRVFRKQEKNRL 298 >UniRef50_C9A3T9 Transcriptional regulator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A3T9_ENTGA Length = 296 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 53/294 (18%), Positives = 109/294 (37%), Gaps = 12/294 (4%) Query: 8 NASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHA 67 + +T+ +G L+ D + H H +E E+ Y +G F I Y Sbjct: 2 ESMKTIVYSGMMNGLTIDRSRRDSIYNMVKHWH-SECEIQYFIEGNRYFLIGEKTYKIQP 60 Query: 68 DDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ------GAEENQLLQPHSCPVIAAG 121 +V+I +H S +F G + H + Sbjct: 61 GTLVMIHPDCVHNTFSGKYIYHDRVLVLYEASKFPRIAQSMGIDLETFFLKHHGIIQIPP 120 Query: 122 QGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYI--KKD 179 + ++TL +++ + + + + + E K+ Sbjct: 121 ADRSYVQTLLAKIADEVIHKEYNYQVMVETKLIELFIFIQRIKNFRGLSDEPAESLGKQS 180 Query: 180 VLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKW 239 L+ I ++ NY +LEQ++ F SY+C F + + Y +R+ +++ Sbjct: 181 ELVNQIAAFIRRNYASIHSLEQIASSFYLDKSYLCRIFKRATGYTITEYTNIQRIRQSQR 240 Query: 240 SLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ---FKNCFAEQE 290 L +T+ AEI+ + GY N+ ++ ++F ++ SP YR++ +K E+ Sbjct: 241 LLEDTDWDIAEIARKSGYSNITYYNRVFKKYTETSPLQYRKKQIAYKESLREKN 294 >UniRef50_A6NSG8 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSG8_9BACE Length = 281 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 104/270 (38%), Gaps = 11/270 (4%) Query: 15 VAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIE 74 + L + W S H H E+ Y+ G F +D D ++I Sbjct: 14 FPPQGRLLYLSTSVYEEDWASVVHSHPIA-EIFYIINGRGVFMVDGVHRSVKQYDCLIIA 72 Query: 75 RGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNEL 134 H + P + G L + + + N + Sbjct: 73 PNTPHTEKAFPGQPMEYVVLGVDGLTLSDEHGKYFLDTF-------EEYNDELLNYLNLM 125 Query: 135 SVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVL---IKDILFYLNN 191 + T+ + L +++ ++ + Q K + + Y++ Sbjct: 126 LKESQHEQFGSTAICQHLLSVLLLLVHRKSGLHLVADIQPTSKAQEVPPECGRVKNYIDY 185 Query: 192 NYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEI 251 Y + ITL L++ Y+ H FTK Y +SP+NY+I++R+ AK L N++ + AEI Sbjct: 186 YYSDNITLALLARIAGWDRFYLSHAFTKAYGLSPMNYLIKKRLDCAKELLKNSDHTIAEI 245 Query: 252 SWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 S +G+ + ++F + F R VG + ++YR+ Sbjct: 246 SQMLGFSSQNYFTQTFKRKVGITATEYRKS 275 >UniRef50_C6JD68 Transcriptional regulator n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD68_9FIRM Length = 311 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 107/299 (35%), Gaps = 31/299 (10%) Query: 11 ETLFVAGKTPRLSRFAFS--DDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHAD 68 + + V G F + HH H+ E EL+Y G ++ + + Sbjct: 10 KEIRVHGTQDFPCAFYQTGTRIKGNMVKHHWHE-EVELLYFSGGEFCLEVNMERFNISEE 68 Query: 69 DIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE-NQLLQPHSCPVIA-------- 119 I G LH+++ + N + A +Q+ PV Sbjct: 69 CFYFINPGELHSISVEKNGGCVENAVVFHMDMLNSAYALDQIQTNLIQPVQNGSIQFPRC 128 Query: 120 ----------AGQGKEVIKTLF-------NELSVILPQSKNSQTSSLWDAFAYTLAILYY 162 + E I+ +F N ++ + A LA+L Sbjct: 129 LRKNEPAFEPVRKSYEEIRNVFGGDSFRENYYDGEAVTDDITRQLFIKSALLRILAVLSA 188 Query: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222 N +E+ + + IK L Y+ NY+EKI + L+ + Y C F K Sbjct: 189 NNLFEV--TEKNHDHRIETIKTTLTYIQENYKEKIYIRDLAGLIGMNEQYFCRFFKKVIG 246 Query: 223 ISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 SP+ YV + R+ A L ++L+ EI GY N+ +F + F ++ +P YRR Sbjct: 247 RSPMEYVNEYRIKRAIHYLKESDLTVTEICLECGYNNLGNFLREFRKYTSTTPLQYRRH 305 >UniRef50_A6LR84 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=A6LR84_CLOB8 Length = 285 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 95/253 (37%), Gaps = 9/253 (3%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H++ ++ Y G ++ + D+++I LH + S ND Sbjct: 32 NFKEHWHEH-LQVFYFINGKGFLRCNTKSFNIIQGDVIIINSRDLHYLESLNNDLRFYLI 90 Query: 94 CALYGFQFQG---AEENQLLQPHSCPVIAAGQ---GKEVIKTLFNELSVILPQSKNSQTS 147 F F + + L P S +I + I + + + Sbjct: 91 RIDLPFLFSDQVDLCQTKYLSPLSENLILFKNLIRNDDEIVRCIKTIIKEYNKKEIGYEL 150 Query: 148 SLWDAFAYTLAILYYENFKNAYRSEQ--GYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 ++ + +L Q I D + ++++N+ +KI+ LS Sbjct: 151 AVKANLYNLVVLLIRNYIDKFVTKRQLAFKINNDERFYKVFEFVHSNFNKKISTLNLSNI 210 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 S Y C F + + Y+ + R+ ++ L N+ ++ E++ G+ +V++F++ Sbjct: 211 AHVSPYYFCRIFKQITGKTTTEYINEVRLKKSIELLKNSNMNITEVAINCGFNDVNYFSR 270 Query: 266 LFLRHVGCSPSDY 278 LF + G SP+ + Sbjct: 271 LFKKKYGVSPTKF 283 >UniRef50_A8SHV0 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHV0_9FIRM Length = 309 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 112/283 (39%), Gaps = 16/283 (5%) Query: 26 AFSDDPKWESGH-HVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVAS- 83 ++ + H H E E+ + +G + ++ Y A A ++++++ G++H S Sbjct: 28 HMVRPANFDMRYNHFHQ-EYEIYLLLRGRRQMFFENRAYEAQAGNLILVDSGQIHMSHSI 86 Query: 84 --DVNDPATTCTCALY-------GFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNEL 134 D + F + H + + LF ++ Sbjct: 87 VGDPETEYERVILYVDRDIVEKVDKMFPELKIGAFFHKHYGIYELTPKQTANTRRLFLQI 146 Query: 135 SVILPQSKNSQTSSLWDAFAYTLAILYYEN----FKNAYRSEQGYIKKDVLIKDILFYLN 190 L +++ +++ N N + + K + I Y++ Sbjct: 147 MEELDKAEPMSQTAILSELILGFIYFRRSNQQVACLNDVQEGKASGGKFDAVYQISDYIS 206 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 ++++E+++L+ L+++F S Y+ F + Y+ R+ +A+ L T LS +E Sbjct: 207 DHFQERLSLDSLAEQFYISKYYLSRSFHEVTGFGINEYINILRVKKAQSLLETTTLSVSE 266 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILS 293 I+ R G+E++ + ++F ++ +P+ YR+ + + + Sbjct: 267 IASRTGFESITYLGRVFKKYQHVTPAQYRKSLTSTAEKNNTNT 309 >UniRef50_C9KN80 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN80_9FIRM Length = 285 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 97/242 (40%), Gaps = 8/242 (3%) Query: 41 DNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 + L Y+ KG +F ++ Y A I +D ++P G + Sbjct: 38 RSYCLLHYITKGKCKFQVNGMTYHLQAGQGFFIAPDFETRYETDGDEPWNYIWVGAAGEE 97 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + L + P+ + QG ++ + + L + +AIL Sbjct: 98 MKHLMHVLGLSQ-ANPIFSCHQGDRLVHCVRDMLQHRQMTMTDHYFR--MSTLYRFIAIL 154 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 E N + + I +++ Y+ ++ E ++ +++ + SY+ F + Sbjct: 155 SEERQVNQPLASV-----NSYIANVMTYVRHHLHEHMSTAEIAATMNLNRSYLSSLFRSQ 209 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 ++ +Y+ RMT AK+ L +T LS A I+ GYE D + F + G SP+DYR+ Sbjct: 210 TGMTLRSYIQLCRMTRAKYLLESTHLSIASIAESCGYEKSDSLNRTFRKTYGISPADYRK 269 Query: 281 QF 282 F Sbjct: 270 SF 271 >UniRef50_Q00753 Msm operon regulatory protein n=8 Tax=Streptococcus RepID=MSMR_STRMU Length = 278 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 108/279 (38%), Gaps = 11/279 (3%) Query: 6 FDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVA 65 FD + L V D + G + DN + ++ +G + TI+ Sbjct: 10 FDINNFDLSVDHYGSEKC------DRGYSFGPTIRDNYV-IHFILEGKGKLTINQHTLDL 62 Query: 66 HADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKE 125 A DI ++ + +D+ P + G + + + L +G+ + Sbjct: 63 AAGDIFLLPKDISTFYQADLQMPWSYIWIGFSGSKAENILKQSSL--FKRFYCHSGRSSK 120 Query: 126 VIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDI 185 + + + + + LA L E + K + + Sbjct: 121 LFSQMMTIIQFANTPLTSVNELLMVGELYKLLAALIEEFPLSHLEESNSSTK--AYVNQV 178 Query: 186 LFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTE 245 +++ Y + + ++KK S SY+ F K +S Y++Q RM +++ L N + Sbjct: 179 KKIIHSQYGSSLRVNDIAKKLNLSRSYLYKIFRKSTNLSIKEYILQVRMKRSQYLLENPK 238 Query: 246 LSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 LS AEIS VG+ + F+K F + G SPS +R++ +N Sbjct: 239 LSIAEISNSVGFSDSLAFSKAFKNYFGKSPSKFRKEIQN 277 >UniRef50_C6D8J8 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8J8_PAESJ Length = 294 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 56/251 (22%), Positives = 101/251 (40%), Gaps = 6/251 (2%) Query: 42 NETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQF 101 N T + + G F Y DI VI G L +D +P + AL G Sbjct: 45 NYTLIHSIDHGFGTFEWQRKKYHLGKGDIFVIFPGVLFNYEADKAEPWSYRWVALQGRNV 104 Query: 102 QGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW-DAFAYTLAIL 160 EN + + P++ G + ++F + L +SL D + L Sbjct: 105 TEMLENVGVT-ITNPIVR-GADSANLASIFETIEQELELKSGETITSLATDGWFRLLLAE 162 Query: 161 YYENFKNA--YRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 + N Y S + + L++ + + Y I++E+L+ ++ F Sbjct: 163 FARLNTNKLHYSSTKVLTDSERLVEQAIRWFQTQYMLPISIEKLATSLGYHRTHFTKVFK 222 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + +SP Y+ Q RM A+ L NT +S ++ G+ + +F+K F + G SP+ Y Sbjct: 223 QLTSLSPKQYINQVRMERARELL-NTNISIEQVGNSCGFTDPLYFSKQFKKWTGTSPTQY 281 Query: 279 RRQFKNCFAEQ 289 R + K + ++ Sbjct: 282 REELKRLYRDR 292 >UniRef50_C5RGS5 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGS5_CLOCL Length = 293 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 51/286 (17%), Positives = 106/286 (37%), Gaps = 21/286 (7%) Query: 10 SETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTI---DSSLYVAH 66 + L P ++ + F ++ +H HD E++YV G + + + Sbjct: 8 NPKLLNKDYRPIINTYYFRQWINYKMDYHTHDR-VEIMYVIDGQCEIDVATDNVNNLKLK 66 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEEN-----------QLLQPHSC 115 D ++++ G +H + + + LL C Sbjct: 67 KGDFILLDAGTVHRLIVLGEKSCRMLNIEFSFIEDSDILTSIRLLIEKVKSIALLFEMRC 126 Query: 116 PVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGY 175 P + ++ +L N + + +S+ +Q S L S + Sbjct: 127 PFLLLKDNNDIYHSLKNIVIQLGMESEENQFS------IQLLFYELLLKISKVAMSNENT 180 Query: 176 IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMT 235 ++ I +++ NY + IT++ +S + Y+ F K + YV R+ Sbjct: 181 STSNIYINKAKHFISMNYDKDITIKDISSYVNINEDYLNRIFKKHTGHTITEYVTLFRIE 240 Query: 236 EAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 +AK L+NT++ +I VG + +F+++F + G SP YR+ Sbjct: 241 KAKMLLSNTDIPIIDICSYVGINSRQYFSQVFKKCTGISPYKYRKS 286 >UniRef50_Q64XT7 Transcriptional regulator n=13 Tax=Bacteroidales RepID=Q64XT7_BACFR Length = 318 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 54/274 (19%), Positives = 108/274 (39%), Gaps = 10/274 (3%) Query: 13 LFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVV 72 L++ + + ++ IY +G F++D + + + Sbjct: 53 LYITDIGYYPKAYNHFRERDTPI------DQYVFIYCTEGRGWFSLDGQKHPVVPNQYFI 106 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQP-HSCPVIAAGQGKEVIKTLF 131 + G HA +D +P T G ++ + P + + LF Sbjct: 107 LPAGLPHAYGADEKEPWTIYWIHFGGTLAPLYCTHRTCRLTDIKPGMHSRISYRT--ELF 164 Query: 132 NELSVILPQSKN-SQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLN 190 E+ +L + S F + L L Y SE ++ + + Y+ Sbjct: 165 EEIFRVLKMGYSLENLSYASSVFHHYLGSLRYLREYREAFSEHRPAGEEDPVNAAIHYMK 224 Query: 191 NNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE 250 N +K+TL +L+ S SY + F K +P++Y Q ++ +A L T++ + Sbjct: 225 ENLGKKLTLAELADYTGYSSSYFSNLFLKRTGYAPLSYFNQIKIQKACQFLDFTDMKVNQ 284 Query: 251 ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 + +RVG E+ +F++LF + +G SP +Y++ K Sbjct: 285 VCYRVGIEDAYYFSRLFSQIMGMSPREYKKVKKG 318 >UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C27 Length = 262 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 86/275 (31%), Gaps = 44/275 (16%) Query: 35 SGHHVHD----------------------NETELIYVKKGVARFTIDSSLYVAHADDIVV 72 H HD L YV +G FT + A + V Sbjct: 8 VNRHWHDINPVDCGWEACAPGHSFGPAARFYWLLHYVIQGRGAFTAEGKESPVRAGQMFV 67 Query: 73 IERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFN 132 I + +D +P LLQ G ++F+ Sbjct: 68 IRPFEVTYYEADRREPWEYIWIGFT---CGIPLPECLLQEAVVNASRCG-------SIFS 117 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 + + + L LA L E+ + ++ YL N Sbjct: 118 SML-EAENQTDGRELFLCGKAFQLLAAL-----------EEKPAGGEDYVEQARTYLEAN 165 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 Y +++ +L+ K + SY F K+ SP Y+ RM A +T S + + Sbjct: 166 YMRDVSIGELAGKLNLNRSYFSTLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSPGKAA 225 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 GY ++ F+++F +H G P +Y R+ Sbjct: 226 LSTGYPDIFSFSRMFKKHFGVFPREYSRRQTEKEE 260 >UniRef50_C6D8E9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8E9_PAESJ Length = 294 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 108/290 (37%), Gaps = 14/290 (4%) Query: 4 RCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLY 63 ++ + L++ T K+ + H H + E I V G F ++ Sbjct: 13 LNYNLKNFQLYIKKGTLMPFD-------KYAAACHWHPD-LEFILVLDGYMNFFVNGETV 64 Query: 64 VAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEE------NQLLQPHSCPV 117 + + + RLH S + ++ + + P++ Sbjct: 65 LLEKGTGIFVSSKRLHYGYSPDKIDCSYIVVCIHPSLLGNEQWIGKEYWEEKFGPNTEDF 124 Query: 118 IAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIK 177 I + + K L+ + + ++ + + + + Sbjct: 125 IVLTEHESWHKDALVSLNQLYEEMHATKRNPIRLLSIAMSLTANIGDRIGEKKEPTAIDP 184 Query: 178 KDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEA 237 + + +++ ++ KITL+ ++ S S C F K SP Y+++ R+ ++ Sbjct: 185 SWFYVWKMTAFIHGHFEHKITLDDIAAAGSVSRSQCCILFGKYVEQSPNTYLMKYRIKKS 244 Query: 238 KWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 L+ T+ S +EI+ G+++ ++ +F + +G P++YRRQ+++ Sbjct: 245 CELLSETDRSISEIAISCGFQSSSYYTFVFRKELGIVPNEYRRQYRDAHQ 294 >UniRef50_B8I1T1 Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=B8I1T1_CLOCE Length = 265 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 12/251 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 D G + + YV G F Y D + +I L +D +P Sbjct: 25 DKGHFFGPASRE-YYLIHYVVSGSGVFERAGKRYPLSKDCLFLIRPYELTFYKADKENPW 83 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 G +N C + + + ++S L Sbjct: 84 EYIWIGFDGSLVPDLLKNSGFSDDICTMHIPSLSTTFLS------MKEVENLQHSSEIFL 137 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 + L + V K Y+ +NY I++E ++ Sbjct: 138 CGKIFEMFSYL-----SEEFSPTPKGSTTSVYCKRAKDYIMSNYANHISVESIANMLGID 192 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 Y+C F K +P N+++ R+ +A + L+ + AE GY+++ +F+K+F + Sbjct: 193 RRYLCRIFYKYTGSTPQNFIVNYRLEKAAFLLSKHGYTVAEAGRSTGYDDIYNFSKMFKK 252 Query: 270 HVGCSPSDYRR 280 G PS Y+ Sbjct: 253 KYGVPPSRYKN 263 >UniRef50_C9L4N0 Putative transcriptional regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4N0_RUMHA Length = 275 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 107/268 (39%), Gaps = 9/268 (3%) Query: 16 AGKTPRLSRFAFS-DDPKWE-SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVI 73 G + ++ W HH HD E E++Y KG ++ + I Sbjct: 14 HGTSLFPCALYEVCEEKNWSGVPHHWHD-EMEILYFSKGSYTLFVNMEQFQIEEKCFYFI 72 Query: 74 ERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNE 133 G LHA+ + + F+ Q L+P + + + +F++ Sbjct: 73 YPGELHAIVPHSDSTESALVFHPSLLGFEYKLFPQCLKPSNPAFSPFEKEYRKVFHIFHQ 132 Query: 134 LSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNY 193 P+ S + IL F + ++E+ + IK L +L+++Y Sbjct: 133 ----FPEDSLSARLFIQSGIFKMAGILST--FPSLLQTERKTDMRIETIKTALDFLHSHY 186 Query: 194 REKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISW 253 +EK+ + L+ + + Y C F K SPI Y+ + R+ +A L T+L E+ Sbjct: 187 QEKLYIRDLALQVNMNEQYFCRFFKKVLGKSPITYLNEYRIKQACILLQTTDLPIMEVGM 246 Query: 254 RVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 G+ ++ +F K F ++ +P YR++ Sbjct: 247 DCGFFHLGNFMKEFKKYTETTPLQYRKK 274 >UniRef50_C6D019 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D019_PAESJ Length = 289 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 111/295 (37%), Gaps = 19/295 (6%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS 60 + F SE LF R F S + H+H + EL Y+ G ++ I Sbjct: 3 LSNELFYGDSEDLFFLEYNKRKGHFTMSVE-------HIH-GQYELYYLFSGERQYFIKD 54 Query: 61 SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVI-- 118 Y A D+V+I LH SD P Y ++ + + P + Sbjct: 55 RKYPIAAGDLVLIPANELHKT-SDTGVPNHARIVLYYNEKYFEQYGKEESELLLSPFLGS 113 Query: 119 -----AAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQ 173 A Q + + L L + + + A A L N Sbjct: 114 RRVFRLAHQERLRFEQLLYGLLQEVQERPPGHEMPIRHAVAEALLFAARHAIHNKPDPSD 173 Query: 174 GYIKKDVLIKDILF---YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVI 230 G + + Y+ +++RE +TL+ LS++F S SY+ F K Y+ Sbjct: 174 GSVPPSPAAAKAMEIASYVADHFREPLTLDSLSRQFHLSTSYLSRTFKKYTGFGLTEYIG 233 Query: 231 QRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNC 285 R+ EA+ L T+ EI+ VG+E++ F ++F H+ SP DYR Q+ Sbjct: 234 ITRVKEAQHQLRETDERITEIAAEVGFESLSQFERVFKTHIRLSPRDYRNQYGQK 288 >UniRef50_C6D8V3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V3_PAESJ Length = 309 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 93/283 (32%), Gaps = 13/283 (4%) Query: 17 GKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERG 76 P++ + + + G H HD TE +YV G + + D+++++ G Sbjct: 16 DFRPKIMAYYYKQWEDFHMGFHQHDW-TEFMYVISGNCTVETNKDVIAMRKGDLIMLDAG 74 Query: 77 RLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIA----------AGQGKEV 126 H + + P G + + P+ + + E Sbjct: 75 VPHRLIVESGSPCRMLNVEFGFQPCDGIYPSMNQLANHNPMFSKLLEQRLDTIVLRDYED 134 Query: 127 IKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYE--NFKNAYRSEQGYIKKDVLIKD 184 I+ L L + ++ L + ++ Sbjct: 135 IQVNLRNLVFELDLGGEGKEQGREMMTNLLMSQLLVRVGRLVAVEAKNSTERQIHHYVRQ 194 Query: 185 ILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNT 244 Y++ Y I + ++ Y+ F + Y++ RM +AK L T Sbjct: 195 ATEYIHQYYDTAIQAKDIAAAVNLHPVYLQRIFKSNMNKTINEYLVDLRMDKAKMLLART 254 Query: 245 ELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFA 287 ++ E++ +G + +F+ LF + G SP++YR+ + Sbjct: 255 DVPIIEVADHIGLNSRQYFSMLFKKMTGISPAEYRKSKNTISS 297 >UniRef50_A8SQD4 Putative uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD4_9FIRM Length = 300 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 11/268 (4%) Query: 21 RLSRFAFSDDPK-WESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 + P ++ H HD E E+IYV+KG ID + + + G LH Sbjct: 17 PFCEYHMRYFPHAFQIPVHWHD-EMEIIYVRKGPLTVEIDGQKFTGEDGSVFIASPGVLH 75 Query: 80 AVASDVNDPATTCTCALYGFQFQGAEENQL-------LQPHSCPVIAAGQGKEVIKTLFN 132 +++ + P T ++ L L+ H+ ++++ L Sbjct: 76 MMSA-PDTPVDYFTFIFPLEFISFQTKDALEDEVFFPLRNHTRGFRPEVADRKLLGKLIP 134 Query: 133 ELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNN 192 L ++ ++ T L + + + E L K+IL Y+ +N Sbjct: 135 ILDELVEENGKMGTHRQIQVRIRLLQM-MDLLVEYSQLEELTRNASGELEKEILLYIQDN 193 Query: 193 YREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEIS 252 Y + I L +LS+ F S Y+ F++ + ++ YV R+ A+ L +T+LS EI+ Sbjct: 194 YHDNIGLAELSEHFHLSEKYMSRLFSERFHMTLTQYVNYVRLRYARHLLESTDLSVTEIA 253 Query: 253 WRVGYENVDHFAKLFLRHVGCSPSDYRR 280 + GY+NV +F + F +G SP YR Sbjct: 254 MKSGYQNVSYFIRRFSSAMGESPLRYRN 281 >UniRef50_Q187Y6 AraC-family transcriptional regulator n=7 Tax=Clostridium RepID=Q187Y6_CLOD6 Length = 298 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 103/260 (39%), Gaps = 11/260 (4%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H H++ ++ Y G+A + +IV+ LH + S ++ + Sbjct: 30 NFKRHWHEH-LQIYYFIDGIAYLECGLDNFKVVPGNIVIANSNELHYLESLSDN-LKFYS 87 Query: 94 CALYGFQFQGAEENQLLQPHSCP-------VIAAGQGKEVIKTLFNELSVILPQSKNSQT 146 + + + L + P Q +I + + Sbjct: 88 IRIEPTFLFSNQVDLLQTKYLAPLALNHIVFNNLIQNDSLILKCITTILDEYHNKEVGYE 147 Query: 147 SSLWDAFAYTLAILYYENFKNAYRSEQGYIKKD--VLIKDILFYLNNNYREKITLEQLSK 204 S+ + +L + Y ++ +K + I + Y +KITL++L+ Sbjct: 148 LSIKANIYQLIVLLLRSHIDKIYSEDEFIKRKYSLEKFECIFDLIEEKYMDKITLKELAS 207 Query: 205 KFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFA 264 + S + C F + + I+++ R+ +A + L T+L+ EI+ R G++++++F+ Sbjct: 208 RVNLSAHHFCRTFKQITGKTTIDFINGIRLDKAIYYLKETDLNMTEIAMRCGFDSINYFS 267 Query: 265 KLFLRHVGCSPSDYRRQFKN 284 +LF R+ SP+ YR + + Sbjct: 268 RLFKRNYNISPTKYRNEHRE 287 >UniRef50_UPI0001C36461 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36461 Length = 276 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 12/268 (4%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 + G V ++ + +V KG + Y + +I G + +D +P Sbjct: 12 EKGHFFGPAVRSHQL-IHFVLKGKGIYRTGYGQYEIKEGEAFLIRPGEVTYYQADFEEPW 70 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 + A G + E HS PV A G+ V F L ++ ++ + Sbjct: 71 SYAWIAFDGDGAEALLER-YYPDHSFPVCAMGEITAVSGW-FEGLLGAFGSAEENRE-RV 127 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 F +A L E+G K + ++ +NY I + +++ Sbjct: 128 LGYFYLIMACLLRSGKGGVPVDEEG------YFKRAVAFIRHNYSYPIQISEIAGYVGID 181 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 +Y+ F + +SP Y+ + R+ EAK L TE EI++ GY + F + F + Sbjct: 182 RTYLYRIFMHQAGVSPKQYLSRYRLEEAKEMLVQTEYRITEIAYSCGYHDSSSFCRHFQK 241 Query: 270 HVGCSPSDYR--RQFKNCFAEQEILSEF 295 G +P+ YR ++ K +E + + Sbjct: 242 ATGNAPARYRSMKKIKPGRESEEKIIDN 269 >UniRef50_C7X929 Transcriptional regulator n=6 Tax=Bacteroidales RepID=C7X929_9PORP Length = 296 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 7/238 (2%) Query: 46 LIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAE 105 LIY +G + I Y ++I G ++ +D DP T QG Sbjct: 60 LIYCTEGKGWYRILGKQYTVEKYQYIIIPPGIPYSFGADEGDPWTIYWLHF-----QGKL 114 Query: 106 ENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ--TSSLWDAFAYTLAILYYE 163 +Q L H PV + ++ I ++ + + + Sbjct: 115 CDQFLPSHPVPVTISPNEYSRLQDRLRLFEEIYSSFSMGYIKEYMIYSSMCLYNFLASFI 174 Query: 164 NFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRI 223 + K+ ++ Y+ N ++ +TL++L+ F+ S S+ F E + Sbjct: 175 YLEQFRHIMIPSQKEYPFTARVIHYMRENIQQNLTLKELASYFKYSPSHFSALFFGETGV 234 Query: 224 SPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 SP+NY I+ ++ +A + T + EI+ +G+E+ +F++ F + +GCSPS YR++ Sbjct: 235 SPMNYFIRLKIQKACEYIELTNMKLNEIATHLGFEDAAYFSRTFTKVMGCSPSVYRKK 292 >UniRef50_UPI0001969580 hypothetical protein BACCELL_01380 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001969580 Length = 304 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 100/250 (40%), Gaps = 7/250 (2%) Query: 42 NETELIYVKKGVARF-TIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ 100 NE +LIY+ G F +++ H+ ++++ G H+ D G Sbjct: 57 NEYQLIYILDGKGTFVSMNKKKMQIHSGHMILLFPGEWHSYKPDKETGWYEYWIGFNGQD 116 Query: 101 FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL 160 + E + P+ G + VI L+ + + + + L L Sbjct: 117 IEKLVEVDFFRKD-NPIFNIGLNENVI-QLYKQAANVAQEQTTGFQQILAGIVHLLLGYT 174 Query: 161 YYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE 220 Y E+ +N++ + + I + NY+ +IT + ++ K S S F + Sbjct: 175 YSEHKQNSFINMNVLDQ----INTAKHLIAENYKTEITPKDIATKINMSYSCFRKVFKQY 230 Query: 221 YRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRR 280 SP Y + R+ +K L NT ++ EI++ VG++ +F LF + G SP +YR Sbjct: 231 TGFSPSRYKEELRLQTSKELLANTTMTSQEIAFEVGFDTPYYFCILFKKRTGYSPLEYRN 290 Query: 281 QFKNCFAEQE 290 + + + Sbjct: 291 LAQGKYISND 300 >UniRef50_A6LBM0 Transcriptional regulator n=8 Tax=Bacteroidales RepID=A6LBM0_PARD8 Length = 295 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 10/264 (3%) Query: 20 PRLSRFAFSDDP-KWESGHHVHD--NETELIYVKKGVARFTIDS-SLYVAHADDIVVIER 75 P + S P K+ NE +L+Y+ KG F+ S +A ++++ Sbjct: 34 PPGCAYPLSRHPEKYNFKPQTGRILNEYQLVYITKGSGYFSSQSCKSQKINAGTMILLFP 93 Query: 76 GRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELS 135 G H+ D G E + P+ G I L+ ++ Sbjct: 94 GEWHSYYPDRETGWDEYWVGFRGIHIDKRVEKKFFTKE-EPLHRIG-LSATIVGLYEDIL 151 Query: 136 VILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYRE 195 + K+ + + L +YY+ N++ + K I + + N + Sbjct: 152 KFASEEKSGYQQMISSIVLHILGSVYYKEKNNSFTNTYVVDK----INEARILMKENIED 207 Query: 196 KITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRV 255 ++ E+++ + S+ F + +SP Y +Q+++ AK LT+T L+ +EI++ + Sbjct: 208 PLSPEEIAARLGLGYSWFRRMFKEYTGVSPAQYQLQQKLLRAKELLTSTPLTISEIAYSL 267 Query: 256 GYENVDHFAKLFLRHVGCSPSDYR 279 +EN F+ F + G +PS++R Sbjct: 268 HFENAGQFSTFFKKKEGVTPSEFR 291 >UniRef50_C6IZJ5 Predicted protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZJ5_9BACL Length = 310 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 7/257 (2%) Query: 27 FSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV- 85 H H E E IYV G R ++ + + D+V+ +H S Sbjct: 54 IYQSTNITFYPHFH-AEIEFIYVLSGTIRIGVNEEIRLLRQGDMVICGSNDIHYFDSREL 112 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQ-GKEVIKTLFNELSVILPQSKNS 144 C + + + P I AG G E +KT+ +EL + K Sbjct: 113 ESEIIILICKPEWITMTKSWPSDF--RFASPYIPAGTPGLETVKTILDELIREKDEKKPG 170 Query: 145 QTSSLWDAFAYTLAILYY--ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQL 202 L L + +++ Y + ++ IL Y+ ++YRE++ ++ + Sbjct: 171 YPLLLKAGILKLCGSLQRAVDTLPMDRTTKEKYESRRARMQQILSYIEDHYREELNVKVM 230 Query: 203 SKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDH 262 +K+F S+ F ++ Y+ R+ A+ L ++LS EI+ G+ ++ Sbjct: 231 AKRFSMEPSHFSRSFKAAIGMNFKTYLNTVRVLSAEHQLLTSDLSIMEIALECGFSSIRT 290 Query: 263 FAKLFLRHVGCSPSDYR 279 F ++F G PS R Sbjct: 291 FNRVFKELRGTVPSSLR 307 >UniRef50_A8MEF5 Transcriptional regulator, AraC family n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEF5_ALKOO Length = 854 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 101/282 (35%), Gaps = 10/282 (3%) Query: 14 FVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVI 73 + + R + ++ H H + E++ V +G + Y+ +D+++I Sbjct: 7 LMNWQEDFPIRGSIYSIEGFKV--HWH-SAVEILLVLQGNVSLGVGDHKYLLKENDLILI 63 Query: 74 ERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSC-PVIAAGQGKEVI---KT 129 ++++ D + + + N C + +E + Sbjct: 64 NYNEIYSITRGKEDNL-LLSLQIDPVTLSQYDPNFSRLVFDCKSFMYCKDNQEKFDVVRY 122 Query: 130 LFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDV--LIKDILF 187 ++ + K + A L + IK +K IL Sbjct: 123 YMAKVVWEYSKKKPGYQLRIASNIHLLAAHLVNNLTNENLNQLKSEIKDKDLARLKRILS 182 Query: 188 YLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELS 247 Y+N N +KI+L+ ++K S Y+ ++ Y+ R+ +A L ++ + Sbjct: 183 YINENIDKKISLKTIAKNEHISYFYLSRFIKDNLGVTFQEYINTLRLDKAVNLLLSSNKT 242 Query: 248 QAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQ 289 E+S+ G+ N+ F KLF G SP Y++ K ++ Sbjct: 243 ITEVSYESGFANIKLFNKLFKETFGASPLQYKKIHKESSEQK 284 >UniRef50_C0D4Y3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4Y3_9CLOT Length = 291 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 101/287 (35%), Gaps = 16/287 (5%) Query: 9 ASETLFVAGKTPRLSRFAFSDDPKWESGH--HVHDNETELIYVKKGVARFTIDSSLYVAH 66 S+ + A ++ L F S P + + H H E+ + G + ++LY H Sbjct: 4 DSQVILSATQSIPLLHFYHSVLPPLKRAYSEHKHTAF-EISCILSGSGLYKTQNALYHFH 62 Query: 67 ADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAA------ 120 A DI + +H + ++ + + Sbjct: 63 AGDIFLYSTNEIHYIIEIFDN-CDILNLHFEPRFIWSPGNDLFDSKYLNIFFNHGDSFEN 121 Query: 121 ----GQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYI 176 + I+ L E+ + + L L + + Sbjct: 122 CLEQDEDTARIRQLLLEIEKEFNEKLPDYELMVKVKVLTILVTLGRNFNFSIPQKALSQS 181 Query: 177 KKDVLIK--DILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRM 234 + L++ L Y+++N I L ++K S SY F + ++P Y+I +R+ Sbjct: 182 RSQHLLQLDKALAYIDDNISSDIDLNTIAKTAHMSRSYFSTIFKEMNGLTPWEYIINKRV 241 Query: 235 TEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQ 281 A LT+T+ S +I+ + G+ N +F F + SPSD+R+ Sbjct: 242 ELAAHYLTSTDFSILDIACKCGFNNTANFNHAFKKVTRKSPSDFRKS 288 >UniRef50_C4ZHR1 Xylan 1,4-beta-xylosidase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZHR1_EUBR3 Length = 276 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 98/263 (37%), Gaps = 2/263 (0%) Query: 22 LSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAV 81 +D + S H HD+ E+IYV G + + Y ++ VI ++H Sbjct: 16 PIYCDRYEDYRQFSPRHWHDH-IEIIYVVSGSLQVVCGENEYTLKENEFFVINSNKIHGT 74 Query: 82 ASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 S + Q+ + E +K+L ++ I + Sbjct: 75 QSYERVRVLLVQIPYAYLDSYIDDYGQIRFRECYETENGSRKYEQMKSLLKSIAHIYRKK 134 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 L L IL+ + + ++ +KD+L Y+ NY+E I L++ Sbjct: 135 GKGYELRLMAKVNEFLYILFTNYSYKEMNAGKE-SRQIARLKDVLRYVAKNYQEPIALKE 193 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 + + Y C F K ++ + YV Q R+ L TE S +I G+ N Sbjct: 194 AADIASLNQDYFCRMFKKCMGVTFLEYVNQVRINHIHEELLATEDSITDILEHNGFTNYK 253 Query: 262 HFAKLFLRHVGCSPSDYRRQFKN 284 F+++F G +P + R+ +N Sbjct: 254 VFSRMFKAQFGMTPRELRKLQEN 276 >UniRef50_C4Z7H0 AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR n=8 Tax=Bacteria RepID=C4Z7H0_EUBE2 Length = 303 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 106/301 (35%), Gaps = 19/301 (6%) Query: 1 MYQRCFDNASETLFVAGKTPRLSRFAFSDDPK----WESGHHVHDNETELIYVKKGVARF 56 ++ F S + G A + H H EL Y++ G + Sbjct: 4 IHSIEFYTGSREELLPGFEKDFPYIATRAELDKYIGGYVPWHWHRT-VELFYMESGSIEY 62 Query: 57 TIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCA-LYGFQFQGAEENQLLQPHSC 115 + A +I LH + G + +++ Q + Sbjct: 63 DTSGGKILFPAGSGGMINSNVLHMTKAISQKEKNIQLLHIFDVSLLAGEQGSRIEQKYIT 122 Query: 116 PVIAAGQ-----------GKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYEN 164 P+I Q +E I L I + L +A +L+ E Sbjct: 123 PIITVPQIEVIPLFPGNAEEERILKLLAASFRI-SSDEFGYEIKLREALTEIWLMLF-EL 180 Query: 165 FKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRIS 224 ++ + + K + IK ++ Y++ +YREK+++ +L+ S F ++ Sbjct: 181 SRSMREKKGEHNKSNDKIKLMMIYIHEHYREKLSISELAAAAYLSERECYRVFHDCLHMT 240 Query: 225 PINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 P+ Y+ R+ A L + IS G + +F K+F + CSP +YR++++N Sbjct: 241 PVEYITTYRLQIACQMLAKGQEPVTVISHECGLGSSSYFGKVFREYAHCSPIEYRKKWQN 300 Query: 285 C 285 Sbjct: 301 S 301 >UniRef50_UPI000178921D transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178921D Length = 318 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 54/247 (21%), Positives = 88/247 (35%), Gaps = 3/247 (1%) Query: 37 HHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCAL 96 H H + EL Y++ G I+ DI+ I LH N Sbjct: 56 LHWH-HALELNYIQGGTGFILINGMKLPFRQGDIIFINSNDLHRAYETENLVMDVIMFEP 114 Query: 97 YGFQFQGAEENQLLQPH--SCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFA 154 + L+ P V + + L + S S + Sbjct: 115 SLLSIDLKFDPDLMAPFRSLGNVDRQSPVHDELARLLRRMMEEYKARGTSYMSLIRSDLI 174 Query: 155 YTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYIC 214 L++ A + +K++L + + TL++LS S S Sbjct: 175 RFLSLANRHLSSPAQEHRPIKGRGMHALKEVLRTMELHLDYGWTLQELSDLTHLSPSRFS 234 Query: 215 HEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCS 274 F + SP +Y+IQ R+T A L T+ EI+ G+ N+ +F +LF +HVG S Sbjct: 235 ALFQQAVGTSPHHYLIQLRLTHAVHLLETTDQKIIEIAETCGFRNLSNFNRLFKQHVGAS 294 Query: 275 PSDYRRQ 281 PS+ R + Sbjct: 295 PSEIRER 301 >UniRef50_B9XJ41 Transcriptional regulator, AraC family n=1 Tax=bacterium Ellin514 RepID=B9XJ41_9BACT Length = 295 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 13/244 (5%) Query: 43 ETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ 102 E IY KG I + + ++VI H +D N P T ++ F Sbjct: 59 EVIFIYCAKGNGWCEIAGRKHQISKNQLLVINAFTPHVYGADKNSPWT-----IHWFHAV 113 Query: 103 GAEENQLLQPHSC----PVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLA 158 G+ + L PV+ G LF+ +L ++ T + A++L Sbjct: 114 GSNVSVYLDKLGVTEEKPVVPLGGD----VQLFSLFEEVLESLEHGFTPTHLIYAAHSLT 169 Query: 159 ILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT 218 L ++ G + + + ++ + RE + + L+ S S+ F Sbjct: 170 HLMGLILRHKDEFGYGETSVRERMANSIEFMKGHLREPLNIVTLAALVNLSRSHYSTSFR 229 Query: 219 KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278 + +P++Y+ RM A L TELS EI ++G+ + +F++ F + SPS++ Sbjct: 230 RVTGYAPLSYLNHLRMQRAVQLLNATELSIKEIGDQLGFSDQFYFSRAFRKVHNHSPSEH 289 Query: 279 RRQF 282 RR++ Sbjct: 290 RRRY 293 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 13/266 (4%) Query: 31 PKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD-----V 85 P H H E EL+YV G + I S + D+++I H +D Sbjct: 31 PNKNLVWHYHP-EIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNT 89 Query: 86 NDPATTCTCALYGFQFQGAEE----NQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQS 141 ++ G F E QL + + G K+ I ++ ++ +S Sbjct: 90 SESVVQMKTDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAKKKIG---EKIEILEYKS 146 Query: 142 KNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQ 201 + ++ + + Y+ + S + K++ I I ++ NYRE I+LE+ Sbjct: 147 DFQRLLAILNILNELGSTSEYQILNAEHLSVETQSKENERINSIFNFVKENYREPISLEE 206 Query: 202 LSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVD 261 ++ +V C F K + + +V + RM A L+ E+S EI + G+ N Sbjct: 207 MADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNNFS 266 Query: 262 HFAKLFLRHVGCSPSDYRRQFKNCFA 287 HF K F G SPS+YR Q K+ Sbjct: 267 HFNKSFKAFTGMSPSEYRNQLKSVMR 292 >UniRef50_UPI0001788616 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788616 Length = 297 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 101/275 (36%), Gaps = 11/275 (4%) Query: 11 ETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS-SLYVAHADD 69 E L V + SG LIY +G + ++ Y Sbjct: 33 EPLHVTDVGYFPRALHHYRERPEGSG------AYILIYCAEGEGWYRLNGGKTYSLLKGQ 86 Query: 70 IVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKT 129 VVI H AS P + + G E + P I I Sbjct: 87 AVVIPPDTPHEYASSEFHPWSIYWWHMKGTHAGLLFE--GFTGAAEPAIVPVDQSRSIVE 144 Query: 130 LFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYL 189 LF E +L + A LA + R + + K D ++ L ++ Sbjct: 145 LFQESYELLQKGYTLNHIIHVSQLAGHLAAIIRLARLQPQRGQHQHNKHD--MEQTLRFM 202 Query: 190 NNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQA 249 + ++L++L+ S+ + F + SPI+Y ++ ++ A L T S Sbjct: 203 TEHLEGHVSLKELAAYANLSIPHFTFRFKEATGYSPIDYYLRLKIQRACQHLDLTGESVK 262 Query: 250 EISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKN 284 EIS R+G+++ +F++LF + +G SPS+YR K Sbjct: 263 EISHRLGFQDPYYFSRLFKKIMGKSPSEYRDTRKG 297 >UniRef50_C6D083 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D083_PAESJ Length = 291 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 50/271 (18%), Positives = 90/271 (33%), Gaps = 14/271 (5%) Query: 20 PRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLH 79 P + + ++ G H H+ E+ YV +G I + I G+ H Sbjct: 18 PGVPLYVNRAYESFDMGEHSHE-FVEITYVSEGAGIHYIAGEAVPVEHGTLFFIPVGQSH 76 Query: 80 AVASD---VNDPATTCTCALYGFQFQGAEEN--------QLLQPHSCPVIAAGQGKEVIK 128 + P C L + + Sbjct: 77 VFRPKTPKKDRPLIVYNCLLPASYLSELRDGFPYATEILDCFADEGLSWFSVKDSTGEYH 136 Query: 129 TLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFY 188 +F EL + + L L LY + + G + + + + + + Sbjct: 137 AMFRELYQEFAAKPPAYMAVLASLVMRILTGLYRHKLQIIAPA--GDRPQWLSVDEAIAF 194 Query: 189 LNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQ 248 ++ NY ++ L +L+ + + S F + +S I YV RM A LT S Sbjct: 195 IDRNYASELKLGELAAQAKLSERQFSRLFRRHTGMSLIEYVQSIRMDAACRLLTTRHSSV 254 Query: 249 AEISWRVGYENVDHFAKLFLRHVGCSPSDYR 279 +I+ VGY ++ F +LF + G +P YR Sbjct: 255 EDIAGAVGYADMKFFYRLFKKKTGVTPRQYR 285 >UniRef50_C7NB33 Transcriptional regulator, AraC family n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7NB33_LEPBD Length = 283 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 108/269 (40%), Gaps = 7/269 (2%) Query: 26 AFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDV 85 P + G L Y+K G F + A + IE + +D Sbjct: 22 YEETKPLHKYGPTTRSGYM-LHYIKSGKGTFYSRGKTFHLKAGEFFFIEPEEIIWYEADE 80 Query: 86 NDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQ 145 +P G + + P+ +A +G ++I+ E+ I S+++ Sbjct: 81 YEPWAYYWIGFRGNMVSEYLRRTSVNK-NKPIFSAQKGGDIIRDKIVEIFEISVISEDN- 138 Query: 146 TSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKK 205 L +A + E F Y + K+ ++ L + NN+ + + +++K Sbjct: 139 -DLLLNARLLEILYYLSECFPLTYAKKDS---KNTILAKALQIMRNNFDTSVHISEIAKA 194 Query: 206 FRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAK 265 +Y+ F ++ +I+P +Y+ R+ +AK LT T+ I+ VG E+ +F+K Sbjct: 195 LYIDRTYLHRIFKEKMKIAPKDYLTNLRIAKAKELLTQTDYPVNIIAQSVGIEDAQNFSK 254 Query: 266 LFLRHVGCSPSDYRRQFKNCFAEQEILSE 294 LF SP +YR+ +KN F Q E Sbjct: 255 LFKNKENISPINYRKSYKNSFENQNKKIE 283 >UniRef50_C5RE27 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RE27_CLOCL Length = 820 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 51/268 (19%), Positives = 98/268 (36%), Gaps = 9/268 (3%) Query: 34 ESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCT 93 H HD E E++ V +G + +I S+ ++ +I+ +H + S N+ Sbjct: 23 NYPPHWHD-EIEIVKVLEGKIKVSISESVCFLEKGEMAIIKHKEIHQIQSLENESLLQI- 80 Query: 94 CALYGFQFQGAEENQLLQPHSCPVIAAGQGKEV-----IKTLFNELSVILPQSKNSQTSS 148 + + + ++ + + +K L NE+ L Sbjct: 81 IQINYKFMETHFPHLSRISFENNLLNISKDINLNVASNLKQLINEMINYLSVRNQGYEFH 140 Query: 149 LWDAFAYTLAILYYENFKNAYRSEQGYIKKD--VLIKDILFYLNNNYREKITLEQLSKKF 206 + A + ++ +K I+ Y+ NY +I + L++ Sbjct: 141 VISAIYKVFGSIISNVPYTISTEDELEKNNITFNRMKKIIEYIEQNYMNEININTLAEIL 200 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 + YI H F K +S Y+ RM +A L E S I G++N+ +F K+ Sbjct: 201 HLNKYYIAHFFKKHTGLSLGQYITNLRMNKATELLIKNEDSITNIILSCGFKNIKYFYKV 260 Query: 267 FLRHVGCSPSDYRRQFKNCFAEQEILSE 294 F CSP +Y+ + ++ SE Sbjct: 261 FREVYKCSPLEYKNNRQERSNKKVHESE 288 >UniRef50_C4ZGK8 Two-component response regulator n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZGK8_EUBR3 Length = 285 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 97/256 (37%), Gaps = 11/256 (4%) Query: 35 SGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTC 94 H H E+I +G I L + +DI+ I G H + + Sbjct: 31 YPIHWHTP-MEIIMPLEGGYTVQIGDDLVHLNENDIIFIASGVKHRLIAPDTG--KRLIL 87 Query: 95 ALYGFQFQGAEENQLLQPHSCPVIA-----AGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 + +E + P I +G I+ L ++S + + Sbjct: 88 QIEWSAVSKIKELNSILTLIAPAITLTPETSGDIHSNIRKLLLDISNEYQTDSFLSEAVI 147 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKD---ILFYLNNNYREKITLEQLSKKF 206 + L ++ + ++ G K+ ++ I Y++ + E ITL++++K Sbjct: 148 YSKILEVLVLIGRHHTASSCHFNVGRHKQQEYLERFLSICEYIDTHCTEDITLDEIAKIA 207 Query: 207 RASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKL 266 S + F + + Y+ Q+R+ A L + +S E + + G+ N F ++ Sbjct: 208 GFSKYHFTRLFKQFTNNTFYKYLNQKRIELALTLLADPNISVTETAMQSGFANPSTFIRV 267 Query: 267 FLRHVGCSPSDYRRQF 282 F GC+P+++R+ F Sbjct: 268 FKTEKGCTPTEFRKMF 283 >UniRef50_B0MEA0 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MEA0_9FIRM Length = 292 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 93/242 (38%), Gaps = 7/242 (2%) Query: 30 DPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPA 89 P + G V + L Y G + Y D +I + +D DP Sbjct: 26 TPLYSFGPAVRSHHL-LHYCVSGKGYYYAGDKQYTIEPGDAFLILPDEVTFYQADEQDPW 84 Query: 90 TTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSL 149 T G Q + L S +I + KE++ + ++ S S + Sbjct: 85 TYLWVGFSGNQVNDYLQRCGLD--SEHLICHCEEKELLVSYIEDILRHNTLS-YSNEIYI 141 Query: 150 WDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRAS 209 A + + + +++ I + ++ NY+ IT+ ++ + Sbjct: 142 QGILFLIFASFSR---SADIKYKSDFTSENIHISKAIEFIQKNYQNVITVRDIADYVSLN 198 Query: 210 VSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLR 269 SY+C F + +SP ++++ R+T+A L++T+L IS+ GY N F+K F + Sbjct: 199 RSYLCSMFQENLHMSPQQFLLRFRVTKATELLSDTDLPVKNISYSCGYANQLAFSKAFKK 258 Query: 270 HV 271 + Sbjct: 259 NY 260 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.171 0.526 Lambda K H 0.267 0.0524 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,225,317,040 Number of Sequences: 3077464 Number of extensions: 134512571 Number of successful extensions: 440392 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 20198 Number of HSP's successfully gapped in prelim test: 2695 Number of HSP's that attempted gapping in prelim test: 382126 Number of HSP's gapped (non-prelim): 29746 length of query: 303 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 175 effective length of database: 646,480,964 effective search space: 113134168700 effective search space used: 113134168700 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 93 (40.1 bits)