34 d1gkub1 Probab=98.36   E-value=6.1e-06  Score=58.02  Aligned_columns=121  Identities=17%

Q ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999999961138469997589860889999999999981996589997378166531344679989999999999999
Q batch____       153 NEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYD  232 (354)
Q Consensus       153 n~~Q~~yl~Ai~s~~LV~i~GpAGTGKTlLAla~al~~L~~~~~~kIIItRPtV~agedLGfLPGdl~EKl~P~l~pi~D  232 (354)
                      +.-|...++.+-..+-+++.+|+|+|||+.++..++....++  .|+++.-|+.....++                  ++
T Consensus        45 ~~~Q~~~~~~~l~g~~~~i~apTG~GKT~~~~~~~~~~~~~~--~~~lii~Pt~aL~~q~------------------~~  104 (237)
T d1gkub1          45 RAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALKG--KRCYVIFPTSLLVIQA------------------AE  104 (237)
T ss_dssp             CHHHHHHHHHHHTTCCEECCCCTTSCSHHHHHHHHHHHHTTS--CCEEEEESCHHHHHHH------------------HH
T ss_pred             CHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC--CCEEEEECHHHHHHHH------------------HH
T ss_conf             889999999996799789992599886799999999999626--9869993218999999------------------99


Q ss_pred             HHHHHCCCC--------------------HHHHHHHHCCCCEEEEECHHHCCCCCCC--CEEEEECCCCC--CHHHHHHH
Q ss_conf             999862952--------------------6788864125858996312206887566--48999661329--99999999
Q batch____       233 VLVRRLGAS--------------------FMQYCLRPEIGKVEIAPFAYMRGRTFEN--AVVILDEAQNV--TAAQMKMF  288 (354)
Q Consensus       233 ~L~~ll~~~--------------------~~~~~~~~~~g~IEi~playiRGRTL~n--~~IIIDEAQNl--t~~emK~i  288 (354)
                      .|..+....                    ............+...+....+......  .+|||||+..+  +......+
T Consensus       105 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~viiDE~h~l~~~~~~~~~~  184 (237)
T d1gkub1         105 TIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYRELGHFDFIFVDDVDAILKASKNVDKL  184 (237)
T ss_dssp             HHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHCSTTSCCCSEEEESCHHHHHTSTHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCHHHH
T ss_conf             99999876698402322222047851356765301465420022188866544320476779944655750111214789


Q ss_pred             HHHCC
Q ss_conf             98488
Q batch____       289 LTRLG  293 (354)
Q Consensus       289 LTRiG  293 (354)
                      +..+|
T Consensus       185 l~~lg  189 (237)
T d1gkub1         185 LHLLG  189 (237)
T ss_dssp             HHHTT
T ss_pred             HHHHC
T ss_conf             98716