12 c2pjrF_ Probab=99.23   E-value=6.9e-10  Score=83.08  Aligned_columns=184  Identities=17%

Q ss_pred             CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC--CCCEEEEECCCHHH------------------
Q ss_conf             6758999999999611384699975898608899999999999819--96589997378166------------------
Q batch____       149 ILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHK--DVDRIIVTRPVLQA------------------  208 (354)
Q Consensus       149 i~prn~~Q~~yl~Ai~s~~LV~i~GpAGTGKTlLAla~al~~L~~~--~~~kIIItRPtV~a------------------  208 (354)
                      +.-.|.+|..++.+...+  +.+.||||||||++.+..+..++.++  ...+|+++.+|..|                  
T Consensus         6 ~~~L~~~Q~~av~~~~~~--~lI~g~aGsGKT~~l~~~~~~ll~~~~~~~~~iL~~t~t~~A~~~l~~rl~~~l~~~~~~   83 (544)
T c2pjrF_           6 LAHLNKEQQEAVRTTEGP--LLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAED   83 (544)
T ss_dssp             TTTSCHHHHHHHHCCSSC--EEEEECTTSCHHHHHHHTHHHHTTTSCCCGGGEEEEESCHHHHTHHHHHHTTTSCTTSTT
T ss_pred             HHCCCHHHHHHHHCCCCC--EEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf             505588999999578998--899838998677999999999998289997777797569899999999999962000216


Q ss_pred             -----------------HHHCCCCCCC-----------------------------------------------------
Q ss_conf             -----------------5313446799-----------------------------------------------------
Q batch____       209 -----------------DEDLGFLPGD-----------------------------------------------------  218 (354)
Q Consensus       209 -----------------gedLGfLPGd-----------------------------------------------------  218 (354)
                                       +..+|+-|..                                                     
T Consensus        84 ~~i~T~h~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~k~~~~~~~~~~~~~~  163 (544)
T c2pjrF_          84 VWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRAS  163 (544)
T ss_dssp             SEEEEHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHTTSCCSSSSSCHHHHHHHHHHHHTTTCCHHHHHHSCC
T ss_pred             CEEEEHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             68975279999999984887498978806588899999999998629880217989999999999842689667555200


Q ss_pred             ------------------HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECHHHCCCCCCCCEEEEECCCCC
Q ss_conf             ------------------89999999999999999862952678886412585899631220688756648999661329
Q batch____       219 ------------------IAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNV  280 (354)
Q Consensus       219 ------------------l~EKl~P~l~pi~D~L~~ll~~~~~~~~~~~~~g~IEi~playiRGRTL~n~~IIIDEAQNl  280 (354)
                                        ..++..-+..-+..+...+...............                  +|+|||+|.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~------------------~v~iDe~qd~  225 (544)
T c2pjrF_         164 TYYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQ------------------YIHIDEYQDT  225 (544)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTTEECHHHHHHHHHHHHHHSHHHHHHHHHHCS------------------EEEESCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCC------------------EEEECCHHHC
T ss_conf             2233689999999999988768989689999999996049899997420398------------------8995355439


Q ss_pred             CHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHHH
Q ss_conf             9999999998488987899978815743867777708999999658995289980722011059999998850
Q batch____       281 TAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAY  353 (354)
Q Consensus       281 t~~emK~iLTRiGenSKIVl~GD~~QiDlp~~~~sGL~~aie~lk~~~~i~~V~l~~~DIVRs~Lv~~iv~ay  353 (354)
                      ++.+...+..-.+.+.+++++||+.| -.+.....-........+..+....+.|...=.....+++-.-+.|
T Consensus       226 ~~~q~~il~~L~~~~~~l~~vGD~~Q-~i~~~~g~~~~~~~~~~~~~~~~~~~~L~~~yRs~~~I~~~~n~~~  297 (544)
T c2pjrF_         226 NRAQYTLVKKLAERFQNICAVGDADQ-SIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVI  297 (544)
T ss_dssp             BHHHHHHHHHHTTTTCCEEEEECGGG-CCCTTTTBCTHHHHTHHHHCTTCEEEEECEESSSCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCCCEEEEEECCCC-CCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf             98999999997258984999814454-6422258998999999974589679982887688689999999996