27 c2ja1A_ Probab=98.46   E-value=4.9e-07  Score=64.98  Aligned_columns=109  Identities=18%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             13846999758986088999999999998199658999737816653134467998999999999999999986295267
Q batch____       164 ESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFM  243 (354)
Q Consensus       164 ~s~~LV~i~GpAGTGKTlLAla~al~~L~~~~~~kIIItRPtV~agedLGfLPGdl~EKl~P~l~pi~D~L~~ll~~~~~  243 (354)
                      ++..|++++||+|||||......+-.+-..+  +++++..|..+.....+...-....                      
T Consensus         8 ~~G~i~li~Gp~gSGKTt~L~~~l~~~~~~~--~~v~~i~~~~~~r~~~~~i~~~~g~----------------------   63 (193)
T c2ja1A_           8 QNGWIEVICGSMFSGKSEELIRRVRRTQFAK--QHAIVFKPCIDNRYSEEDVVSHNGL----------------------   63 (193)
T ss_dssp             CCCEEEEEEESTTSSHHHHHHHHHHHHHHTT--CCEEEEEETTCCSSCSSEEECTTSC----------------------
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CEEEEECCCCCCHHHCCCEEHHCCC----------------------
T ss_conf             7973999976978978999999999733279--7699972863001101453022084----------------------


Q ss_pred             HHHHHHCCCCEEEEECHHHCCCCCCC-CEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             88864125858996312206887566-489996613299999999998488987899978
Q batch____       244 QYCLRPEIGKVEIAPFAYMRGRTFEN-AVVILDEAQNVTAAQMKMFLTRLGENVTVIVNG  302 (354)
Q Consensus       244 ~~~~~~~~g~IEi~playiRGRTL~n-~~IIIDEAQNlt~~emK~iLTRiGenSKIVl~G  302 (354)
                            ....+.+.....++-.-..+ ++|||||+|+++.+.+..+..-...+-.+++.|
T Consensus        64 ------~~~~~~~~~~~~l~~~l~~~~dvIiIDE~qfl~~~~~e~~~~l~~~g~~Vi~~g  117 (193)
T c2ja1A_          64 ------KVKAVPVSASKDIFEHITEELDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAG  117 (193)
T ss_dssp             ------EEECEEESSGGGGGGGCCSSCCEEEESSGGGSCTTHHHHHHHHHHTTCEEEEEE
T ss_pred             ------CCCCCCCCCHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             ------347764480799999974499899986854389889999999997798799994