76 c1a1vA_ Probab=97.94   E-value=0.00013  Score=49.61  Aligned_columns=116  Identities=18%

Q ss_pred             HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-
Q ss_conf             1138469997589860889999999999981996589997378166531344679989999999999999999862952-
Q batch____       163 IESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGAS-  241 (354)
Q Consensus       163 i~s~~LV~i~GpAGTGKTlLAla~al~~L~~~~~~kIIItRPtV~agedLGfLPGdl~EKl~P~l~pi~D~L~~ll~~~-  241 (354)
                      ..+++.+++.+|+|+|||+-.....++     ...+++++-|+..+..++                  +..|...++.. 
T Consensus         5 ~~~~q~~il~apTGsGKT~~~~~~~~~-----~g~~vlvl~P~r~La~~~------------------~~~l~~~~g~~~   61 (429)
T c1a1vA_           5 PQSFQVAHLHAPTGSGKSTKVPAAYAA-----QGYKVLVLNPSVAATLGF------------------GAYMSKAHGVDP   61 (429)
T ss_dssp             CSSCEEEEEECCTTSCTTTHHHHHHHT-----TTCCEEEEESCHHHHHHH------------------HHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHH-----CCCEEEEECCHHHHHHHH------------------HHHHHHHHCCCH
T ss_conf             001976999858988788999999997-----797799984638998999------------------999997518450


Q ss_pred             --HHHHHHHHCCCCEEEEECH--HHCCCCCCC-CEEEEECCCCCCHHHHHHH-----HHHCCCCCEEEEE
Q ss_conf             --6788864125858996312--206887566-4899966132999999999-----9848898789997
Q batch____       242 --FMQYCLRPEIGKVEIAPFA--YMRGRTFEN-AVVILDEAQNVTAAQMKMF-----LTRLGENVTVIVN  301 (354)
Q Consensus       242 --~~~~~~~~~~g~IEi~pla--yiRGRTL~n-~~IIIDEAQNlt~~emK~i-----LTRiGenSKIVl~  301 (354)
                        ..........-.|.+....  ...+..+.+ ++||||||..++......+     +-+...+.++|++
T Consensus        62 ~~~~~~~~~~~~~~I~v~T~~~ll~~~~~l~~~~~VIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~~i~~  131 (429)
T c1a1vA_          62 NIRTGVRTITTGSPITYSTYGKFLADGGSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLA  131 (429)
T ss_dssp             EEECSSCEECCCCSEEEEEHHHHHHTTCCCCCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEE
T ss_pred             HHHCCCEEEECCCCEEEECCCHHHCCCCCCCCCCEEEECHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             1221647614798689997118743742026731798304520342221256888876311888379998