121 c3civA_ Probab=25.15   E-value=41  Score=13.33  Aligned_columns=134  Identities=11%

Q ss_pred             HHHHHHHHCCCCEEEEEEEEECCCCCC-EEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEE-----------CCCCCCHH
Q ss_conf             056777642884699999960588741-373067667760136899999987598199982-----------16677106
Q batch____       602 DLAALAKNHNVNHFTLAFVVSKDANTC-LPTWGTAYGMQNYAQYSKIKALREAGGDVMLSI-----------GGANNAPL  669 (897)
Q Consensus       602 ~l~~~a~~~g~k~ftLAFi~a~~~~~c-~p~Wgg~~~l~~~~~~~~I~~Lr~~GgdV~vSF-----------GGa~g~~l  669 (897)
                      ...+.++..|+..+.|..-.-.....+ ...+++........+..-|+..++.|-.|+|-|           ...-...-
T Consensus        30 ~~l~~l~~~G~N~vRi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~A~~~Gl~Vil~~h~~~~~~~w~~~~~~~~~~  109 (316)
T c3civA_          30 ASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEKEH  109 (316)
T ss_dssp             HHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSBSC
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf             99999998399899982324777767765444767767978999999999868987999723588887655566767860


Q ss_pred             HHHHCCHHHHHHHHHHHHHHHCCCCEEEECC-CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             5670899999999999999718870445421-76555310357899999999986420589659999
Q batch____       670 AASCKNVDDLMQHYYDIVDNLNLKVLDFDIE-GTWVADQASIERRNLAVKKVQDKWKSEGKDIAIWY  735 (897)
Q Consensus       670 a~~c~~v~~LaaaY~~VId~Yg~~~lDfDiE-g~~~~d~~~~~rr~~Al~~lq~~~~a~~p~l~vs~  735 (897)
                      .........+...|++.++.|..-..+.-.| -..-.+......+...++.+.+.-++.+|+..+..
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~nE~~~~gne~~~~~~~~~~~~~~~~~ir~~dp~~~~~~  176 (316)
T c3civA_         110 GPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEAMWRETIARVRTEYDGLVTYN  176 (316)
T ss_dssp             CTTSSBHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTTTCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             1255769999999999998799998741998585067777600146789999999997469977994