BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (181 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms Re... 288 5e-77 UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=... 257 1e-67 UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms Rep... 253 1e-66 UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=... 242 3e-63 UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_B... 233 2e-60 UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenel... 230 1e-59 UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms Re... 228 6e-59 UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria R... 225 7e-58 UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8 214 1e-54 UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_X... 209 4e-53 UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (B... 207 2e-52 UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria R... 199 2e-50 UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD3... 189 4e-47 UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 ... 185 5e-46 UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Eutele... 184 2e-45 UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nucl... 183 2e-45 UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila Re... 183 2e-45 UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacteri... 181 1e-44 UniRef50_C7LYK0 Exonuclease RNase T and DNA polymerase III n=1 T... 179 3e-44 UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER 172 5e-42 UniRef50_A9F5N7 Oligoribonuclease n=2 Tax=Myxococcales RepID=A9F... 171 8e-42 UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID... 171 9e-42 UniRef50_Q17819 Probable oligoribonuclease n=3 Tax=Caenorhabditi... 167 1e-40 UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei Re... 166 5e-40 UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA 160 2e-38 UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_... 160 2e-38 UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=... 159 4e-38 UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=... 157 1e-37 UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribon... 156 3e-37 UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms Re... 156 3e-37 UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta R... 155 7e-37 UniRef50_C5KG86 Oligoribonuclease, putative n=2 Tax=Perkinsus ma... 154 1e-36 UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces ja... 152 4e-36 UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes... 148 7e-35 UniRef50_Q22ZB0 Exonuclease family protein n=2 Tax=Oligohymenoph... 147 2e-34 UniRef50_O94626 Probable oligoribonuclease n=1 Tax=Schizosacchar... 146 3e-34 UniRef50_A1A0K1 Oligoribonuclease n=8 Tax=Bifidobacterium RepID=... 141 1e-32 UniRef50_Q8G3N5 Oligoribonuclease n=10 Tax=Bifidobacteriaceae Re... 140 2e-32 UniRef50_Q1CWF9 Oligoribonuclease n=1 Tax=Myxococcus xanthus DK ... 139 5e-32 UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae... 139 6e-32 UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pedic... 139 6e-32 UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7... 137 1e-31 UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 ... 136 4e-31 UniRef50_Q6BKE6 DEHA2F22594p n=4 Tax=Saccharomycetales RepID=Q6B... 134 2e-30 UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorp... 132 4e-30 UniRef50_C5DNN6 KLTH0G18590p n=2 Tax=Saccharomycetaceae RepID=C5... 130 2e-29 UniRef50_A5E684 Oligoribonuclease, mitochondrial n=1 Tax=Loddero... 129 4e-29 UniRef50_A7BDJ9 Putative uncharacterized protein n=1 Tax=Actinom... 129 6e-29 UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae... 128 9e-29 UniRef50_C7YHK7 Predicted protein n=5 Tax=Sordariomycetes RepID=... 128 1e-28 UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturatio... 127 3e-28 UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus... 126 3e-28 UniRef50_A3D8L9 Exonuclease, RNase T and DNA polymerase III n=4 ... 125 7e-28 UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavisp... 123 2e-27 UniRef50_C9SMP6 Oligoribonuclease n=1 Tax=Verticillium albo-atru... 123 3e-27 UniRef50_Q6MNB4 Oligoribonuclease n=1 Tax=Bdellovibrio bacteriov... 123 3e-27 UniRef50_A0BKH9 Chromosome undetermined scaffold_112, whole geno... 122 5e-27 UniRef50_A6DMP4 Oligoribonuclease n=1 Tax=Lentisphaera araneosa ... 119 4e-26 UniRef50_C4YJB7 Oligoribonuclease, mitochondrial n=3 Tax=Sacchar... 118 1e-25 UniRef50_P54964 Oligoribonuclease, mitochondrial n=8 Tax=Sacchar... 114 2e-24 UniRef50_B6HCA9 Pc18g01380 protein n=1 Tax=Penicillium chrysogen... 113 4e-24 UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycot... 111 9e-24 UniRef50_Q4P645 Putative uncharacterized protein n=3 Tax=Ustilag... 109 5e-23 UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun seq... 103 2e-21 UniRef50_A4V739 Plant-inducible oligoribonuclease n=2 Tax=Pseudo... 101 1e-20 UniRef50_B8HIN1 Putative oligoribonuclease n=1 Tax=Arthrobacter ... 101 1e-20 UniRef50_Q2HAN9 Putative uncharacterized protein n=1 Tax=Chaetom... 95 1e-18 UniRef50_Q0UIM9 Putative uncharacterized protein n=1 Tax=Phaeosp... 94 3e-18 UniRef50_Q8QNE0 EsV-1-139 n=1 Tax=Ectocarpus siliculosus virus 1... 90 4e-17 UniRef50_C7TNW1 Putative uncharacterized protein (Fragment) n=1 ... 86 8e-16 UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1 ... 67 2e-10 UniRef50_UPI00005A0A92 PREDICTED: similar to small fragment nucl... 67 2e-10 UniRef50_A5B9I7 Putative uncharacterized protein n=1 Tax=Vitis v... 64 2e-09 UniRef50_B5LWG6 Putative oligoribonuclease n=1 Tax=Feldmannia sp... 64 2e-09 UniRef50_C7J1M8 Os04g0303950 protein (Fragment) n=4 Tax=Oryza sa... 61 2e-08 UniRef50_Q6XM84 FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus ... 57 3e-07 UniRef50_Q5KRE9 Probable oligoribonuclease n=2 Tax=Corynebacteri... 51 2e-05 UniRef50_Q3SMK3 Exonuclease n=1 Tax=Thiobacillus denitrificans A... 43 0.006 UniRef50_B7GTG1 Putative uncharacterized protein n=2 Tax=Bifidob... 42 0.007 UniRef50_C8SCL6 DNA polymerase III, epsilon subunit n=1 Tax=Ferr... 40 0.035 UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 T... 40 0.039 UniRef50_B3DTZ9 Oligoribonuclease n=2 Tax=Bifidobacterium RepID=... 39 0.081 >UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms RepID=ORN_HAEIG Length = 182 Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 133/181 (73%), Positives = 156/181 (86%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS ++ NLIWIDLEMTGLDPE++RIIEIAT+VTD NLNILAEGP +AVHQSDE L M+D Sbjct: 1 MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 W +TH+ +GL+ERVKAS + +R AEL TL+FLK+WVP G SPICGNSI QD+RFL KYM Sbjct: 61 WCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P+L YFHYR+LDVSTLKELA RWKPEIL+GF K+ TH A+DDIRES+ ELAYYREHF+K Sbjct: 121 PDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMK 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=ORN_PSEA7 Length = 180 Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 120/178 (67%), Positives = 142/178 (79%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 N NLIWIDLEMTGLDP+RD IIE+AT+VTD++LN LAEGP IA+HQ +E LA MD+WN Sbjct: 3 NPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVLAGMDEWNT 62 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 R H SGL +RV+ ST+ EAE TL FL+QWVP SPICGNSI QDRRFL+++MP L Sbjct: 63 RQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRL 122 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 E YFHYR LDVSTLKELA RW P++ + F K TH A+DDIRES+AEL +YR+HFIKL Sbjct: 123 EGYFHYRNLDVSTLKELAARWAPQVRESFKKGNTHLALDDIRESIAELRHYRDHFIKL 180 >UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms RepID=A3JF32_9ALTE Length = 180 Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 115/179 (64%), Positives = 143/179 (79%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A N L+WIDLEMTGLDPE++RIIE+ATL+TD+ LN++AEGP +AVHQSD + MD+W Sbjct: 2 AKGNRLVWIDLEMTGLDPEQERIIEMATLITDSELNLIAEGPVLAVHQSDTLMGAMDEWC 61 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 RTH SGL +RV S + + EAE TL FL++ + G SP+CGNSIGQDRRFL KYMP+ Sbjct: 62 TRTHGESGLTQRVTDSRISEAEAEQQTLAFLREHLEPGDSPLCGNSIGQDRRFLVKYMPQ 121 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 LE +FHYR LDVST+KELARRW+P++LDG KQG H A+DDIR+S+ EL +YREHF KL Sbjct: 122 LEEFFHYRNLDVSTIKELARRWRPDVLDGVKKQGNHLALDDIRDSINELRHYREHFFKL 180 >UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=ORN_AZOSE Length = 183 Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 110/181 (60%), Positives = 143/181 (79%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ ++N+LIW+D+EMTGL P+ DRIIEIA ++TD+ LN +AE P IAVHQ D L MD+ Sbjct: 1 MAQDQNHLIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVLDAMDE 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN TH SGL +RVKAS +G+ +AE L FL+Q VPA SP+CGNSI QDRRF+ +YM Sbjct: 61 WNRNTHGKSGLTDRVKASLIGEADAEAQMLAFLQQHVPAHTSPMCGNSICQDRRFMARYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P LEA+FHYR LDVSTLKELA+RW+PE+ G K+G H+A+ DIRES+AEL +YR++F++ Sbjct: 121 PHLEAWFHYRNLDVSTLKELAKRWRPEVYKGVEKKGKHEALADIRESIAELRHYRDNFLR 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_BURXL Length = 207 Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 105/173 (60%), Positives = 134/173 (77%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 NL+W+D+EMTGL+P+ DRIIEIA +VT++ L+ + EGP +A+HQSDE LA MD WN TH Sbjct: 19 NLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLAGMDQWNQNTH 78 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 SGL++RVKAST+ + +A +FL +VP GKSP+CGNSI QDRRF+ ++MPELE + Sbjct: 79 GRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNSICQDRRFMARWMPELERF 138 Query: 127 FHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 FHYR LDVSTLKEL RRW+P I GF K+ H A+ DI ES+ EL YYREHF+ Sbjct: 139 FHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESIDELKYYREHFL 191 >UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DYM7_EIKCO Length = 238 Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 103/178 (57%), Positives = 136/178 (76%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 N NL W+D+EMTGL+PE DRIIE A ++TDA+LNILA+ + A+HQSDE L MD WN Sbjct: 50 NPLNLCWLDMEMTGLNPEHDRIIEAAVVITDADLNILAQSESYAIHQSDELLEGMDAWNT 109 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 TH +GL +RVK ST+ + E E L+F+ QW+P G SP+CGN++ QDRRF+ +YMP+L Sbjct: 110 STHERTGLTQRVKDSTLSEAEVEQRLLDFIAQWIPQGTSPLCGNTVHQDRRFMQRYMPKL 169 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 EA+FHYR LDVSTLKELARRW P F+K+G+H+A+DDI ES+ E +YR+ F++L Sbjct: 170 EAWFHYRNLDVSTLKELARRWHPAAYKSFSKKGSHRALDDILESIEEFRHYRQTFLRL 227 >UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms RepID=ORN_COLP3 Length = 181 Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 103/181 (56%), Positives = 136/181 (75%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ N++NLIW+DLEMTGL+P D I+EIA ++TD+ LNILA+GP A+ Q+D+ L M+ Sbjct: 1 MAGNDSNLIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNP 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 W + H SGL +R + S + A +L F+++WVP GKSP+CGNSIGQDRRF+ KYM Sbjct: 61 WCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P+ E +FHYR LDVST+KELA+RWKPE+L+ K G H A+DDI+ES+AEL YRE F K Sbjct: 121 PDFEDHFHYRNLDVSTIKELAKRWKPEVLESVVKTGAHLALDDIKESIAELKVYRELFFK 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria RepID=ORN_THICR Length = 184 Score = 225 bits (573), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 106/176 (60%), Positives = 131/176 (74%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +ENNLIWIDLEMTGLD + D+IIEIAT+VTDA LN+LAEGP +A+ L MD W Sbjct: 3 SENNLIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAWCT 62 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +RV+ ST+ +AE T++FLK +VP GKSP+CGNSI QDRRFL + MPEL Sbjct: 63 THHGNSGLTKRVQESTITMAQAEQETIKFLKPYVPKGKSPMCGNSICQDRRFLIEQMPEL 122 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 E +FHYR LDVS+LKELARRW P + G+ K+G H A+DDI ES+ EL YYR++ Sbjct: 123 EQFFHYRNLDVSSLKELARRWAPTVYSGYKKKGAHLALDDIYESIEELKYYRQNLF 178 >UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8 Length = 194 Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 101/174 (58%), Positives = 124/174 (71%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A + LIWIDLEMTGLD +RD IIEIAT+VTDA LN+LAEGP +A+ S E L MD+WN Sbjct: 6 AGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDEWN 65 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 H SGL +RV S + +AE T+ FL +W+ AG SP+CGNSI QDRRFL + M Sbjct: 66 RNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLHRQMSR 125 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYRE 176 LE YFHYR LDVST+KELARRW P + GF K H A+ D+R+S+ EL +YR+ Sbjct: 126 LERYFHYRNLDVSTIKELARRWAPAVASGFAKSSAHTALSDVRDSIDELRHYRQ 179 >UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_XYLFT Length = 193 Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 102/173 (58%), Positives = 122/173 (70%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ LIWIDLEMTGLD RD IIEIAT+VTDA LN+LAEGP A+ L MD+WN Sbjct: 10 SDRRLIWIDLEMTGLDTHRDSIIEIATVVTDAQLNVLAEGPEFAISHPLNVLEAMDEWNR 69 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +RV S + +AE +T+ FL+QWV G SP+CGNSI QDRRFL + MP L Sbjct: 70 NQHRHSGLWQRVLNSEIQHAQAEASTIAFLQQWVKIGASPMCGNSICQDRRFLHRQMPCL 129 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYRE 176 E YFHYR LDVSTLKELA W P ILDG K +H A+ DI +S+AEL +YR+ Sbjct: 130 ERYFHYRNLDVSTLKELAGCWSPSILDGVVKTSSHTALSDIYDSIAELRHYRK 182 >UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=ORN_BUCBP Length = 160 Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 91/155 (58%), Positives = 117/155 (75%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ + NLIWIDLEMTGL+P +IIEIATL+TD NL IL+ GP IA++Q++ QL+ MD Sbjct: 1 MNTDIKNLIWIDLEMTGLNPNIHKIIEIATLITDKNLKILSYGPVIAIYQNNHQLSFMDP 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN + HT +GL+ R+K S + AE+ T+ FLK+WVP SP+CGNSI DR+FLFKYM Sbjct: 61 WNNKMHTKNGLITRIKNSLYTEHLAEIKTITFLKKWVPKNTSPMCGNSISTDRQFLFKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ 155 P LE YFHYR +DVST+KELA RWKP+I + K+ Sbjct: 121 PTLEKYFHYRQIDVSTIKELALRWKPKIYNKLKKK 155 >UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria RepID=ORN_FRAT1 Length = 178 Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 96/178 (53%), Positives = 129/178 (72%), Gaps = 6/178 (3%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +NLIWIDLEMTGLD + +I EIA ++TD +LNI+AE IA++Q DE LA M++W ++T Sbjct: 5 DNLIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKT 64 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 HT +GL +RVK S + AE LEF++++VP SP+CGNSI QDRRFL KYMP ++ Sbjct: 65 HTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDE 124 Query: 126 YFHYRYLDVSTLKELARRWKPEILDG--FTKQGTHQAMDDIRESVAELAYYREHFIKL 181 Y HYR LDV+TLK L + W DG F K+ TH+A+DDIRES+AEL +YR+ + + Sbjct: 125 YCHYRMLDVTTLKLLNQYWG----DGKSFEKKNTHKALDDIRESIAELKFYRQKLLSI 178 >UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD30_ANOGA Length = 228 Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 88/173 (50%), Positives = 119/173 (68%), Gaps = 1/173 (0%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 NL+WIDLEMTGLD E+DRI+EIA +VTD+ LNI+A+GP I +++ D LA M+ W H Sbjct: 45 NLVWIDLEMTGLDVEKDRILEIACIVTDSKLNIIAKGPNIIINEPDAVLAGMNSWCKDHH 104 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 + SGL+E VK ST +AE L+F+K++ P K P+ GNSI DR F+ KYMP L Y Sbjct: 105 SKSGLIEAVKKSTYSVDQAERDVLDFVKKYCPERKCPMAGNSIYMDRLFIMKYMPTLNEY 164 Query: 127 FHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHF 178 HYR +DVST+KEL +RW + + K+ H+A+DDI ES+ E+ YY+ F Sbjct: 165 LHYRVIDVSTVKELCKRWNQNVYNSSPPKKLAHRALDDIEESINEMKYYKSMF 217 >UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5BB5 Length = 188 Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 87/180 (48%), Positives = 125/180 (69%), Gaps = 3/180 (1%) Query: 1 MSANE--NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALM 58 MS N+ N ++WID+EMTGL E DRI+E+A L+TD NLNI+++ +HQSD++LA M Sbjct: 1 MSNNQRRNRIVWIDMEMTGLAVESDRILEVACLITDENLNIVSDEFHQVLHQSDDELARM 60 Query: 59 DDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 ++W HT SGLVE K S +R + + FL +++P G+ P+ GNS+ DR FL K Sbjct: 61 NEWCQEHHTKSGLVEASKKSQEDERSVDKSLYNFLNKYIPKGRCPMAGNSVYMDRLFLRK 120 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREH 177 YMP Y HYR +DVS++KE+ RRWKPE+ D K+ H+++DDIRES++EL +YR++ Sbjct: 121 YMPTSNEYMHYRIIDVSSIKEVVRRWKPEVHDAAPKKERNHRSLDDIRESISELDFYRKN 180 >UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Euteleostomi RepID=ORN_HUMAN Length = 237 Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 89/183 (48%), Positives = 124/183 (67%), Gaps = 4/183 (2%) Query: 1 MSANEN---NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL 57 M+A E+ ++W+DLEMTGLD E+D+IIE+A L+TD++LNILAEGP + + Q DE L Sbjct: 33 MAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDS 92 Query: 58 MDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 M DW H SGL + VK ST+ ++AE L F++Q P G P+ GNS+ +D++FL Sbjct: 93 MSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLD 152 Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYRE 176 KYMP+ + HYR +DVST+KEL RRW PE + K +H+A+DDI ES+ EL +YR Sbjct: 153 KYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRN 212 Query: 177 HFI 179 + Sbjct: 213 NIF 215 >UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nuclease n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792A17 Length = 188 Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 85/176 (48%), Positives = 119/176 (67%), Gaps = 1/176 (0%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 NE+N++W D EMTGLD +IE A ++TD NL +LAE P I +HQSD+ L M++W+ Sbjct: 11 NEHNIVWFDGEMTGLDCNHHTLIEAAIIITDKNLKVLAESPNIIIHQSDKVLENMEEWSK 70 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + H SGL E V+ S + +A+ EF+K + P G P+ GNSI DR F+ KYMP+L Sbjct: 71 KHHGISGLTENVRKSNISIEQADQMLYEFIKPFAPKGVCPLAGNSIHMDRTFIRKYMPKL 130 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHF 178 E++ YR +DVSTLKEL +RWKPE+ + K G H+A+DDI+ESV EL +Y+ + Sbjct: 131 ESHLSYRLIDVSTLKELLKRWKPELANEVPIKSGKHRALDDIKESVQELQFYKSYL 186 >UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila RepID=ORN_DROME Length = 211 Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +++W+DLEMTGLD E+D+I+E+A ++TD +LN+ +EGP A++ E M++W ++ Sbjct: 35 DTDIVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMK 94 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL++R K+S + EA L +L++ +P P+ GNS+ DR F+ K+MP ++ Sbjct: 95 HHYNSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVD 154 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFIK 180 AY HYR +DVST+KELA+RW P ILD K+ TH+++DDIRES+ ELAYY+ + K Sbjct: 155 AYLHYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIKELAYYKANLFK 211 >UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJX7_CORK4 Length = 222 Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 84/172 (48%), Positives = 123/172 (71%), Gaps = 2/172 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + ++WID EMTGLDP ++EIA +VTDANLNIL EG I +H +D++LA MDD+ + Sbjct: 23 DRIVWIDCEMTGLDPSTHVLVEIAAIVTDANLNILDEGLDIVIHATDDELAKMDDFVTQM 82 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS-PICGNSIGQDRRFLFKYMPELE 124 HT +GL + ++ ST+ EAE L+++K+WV A ++ P+ GNSI DR+F+ YMP+L+ Sbjct: 83 HTKNGLTDEIRKSTVSVGEAENEVLDYVKKWVNAPRTAPLAGNSIASDRKFIAAYMPKLD 142 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYR 175 + HYR +DVS++KELA RW P++ K+G H+A+ DI+ES+ EL YYR Sbjct: 143 EFLHYRMIDVSSIKELAHRWYPKVYQNQPKKGLAHRALADIKESIRELDYYR 194 >UniRef50_C7LYK0 Exonuclease RNase T and DNA polymerase III n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYK0_ACIFD Length = 188 Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 88/175 (50%), Positives = 125/175 (71%), Gaps = 2/175 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L W+DLEMTGLDPER I+EIA +VTD L +AE + +H +DE+LA+M+ V+ H+ Sbjct: 2 LAWMDLEMTGLDPERCVILEIAAIVTDDELETVAELGPLVLHATDEELAVMEPVVVQMHS 61 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEAY 126 A+ L+E V+ +++ EAE L FLK +P + P+CGNSIG DRRFL ++MP++EA Sbjct: 62 ANHLLEDVRRASLTIDEAESTVLAFLKAHLPDPHQVPLCGNSIGTDRRFLARHMPKVEAL 121 Query: 127 FHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIK 180 HYR +DVS+LKELARRW PE+++ K H+A+DD+R+S+AEL YYR ++ Sbjct: 122 LHYRSIDVSSLKELARRWYPEVIEHMPQKNPAHRALDDVRDSIAELRYYRSSMLR 176 >UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER Length = 184 Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 120/177 (67%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +++W+DLEMTGLD E+D+I+E++ ++TD +LN+ +E A++ E M+DW + Sbjct: 8 DTDIVWMDLEMTGLDIEKDKILEVSCIITDKDLNVKSEATCFAINHPQEVYDTMNDWCME 67 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGLV+R K+S + +A L +L++ VP P+ GNS+ DR F+ K MP ++ Sbjct: 68 QHYKSGLVDRCKSSDVKPEQASNLVLSYLERNVPKRACPLGGNSVYMDRLFIRKCMPLVD 127 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFIK 180 Y HYR +DVST+KEL RRW+PE+L K+ TH++MDDI ES+ EL YY+++F K Sbjct: 128 DYLHYRIVDVSTIKELVRRWRPELLSSAPKKTFTHRSMDDIMESINELNYYKKNFFK 184 >UniRef50_A9F5N7 Oligoribonuclease n=2 Tax=Myxococcales RepID=A9F5N7_SORC5 Length = 187 Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 84/180 (46%), Positives = 120/180 (66%), Gaps = 1/180 (0%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ ++W+DLEMTGLD I+EIAT+VT+ +L ++AEGP + +HQ + LA M D Sbjct: 1 MTDRSQRMVWVDLEMTGLDESSCAIVEIATIVTEPDLTVVAEGPCLVIHQPESVLAGMSD 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + H SGL+ER++AST+ +AE T FL+ G + +CGNS+ +DR FL +YM Sbjct: 61 FVRDLHERSGLLERIRASTLSVGDAESETRAFLEAHCDKGTAVLCGNSVWKDRAFLQRYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 PEL ++ HYR +DVSTLKEL RRW P + K+ H+A+DDIRES+ EL +YR + + Sbjct: 121 PELLSFLHYRIVDVSTLKELVRRWYP-LRAAPKKREIHRALDDIRESIEELRWYRANVFQ 179 >UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID=ORN_CORGB Length = 219 Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 86/181 (47%), Positives = 122/181 (67%), Gaps = 2/181 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++A ++ L+W+DLEMTGLD +R I+E+A LVTDANLN+L EG + VH ++E+LA MDD Sbjct: 12 VAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVHATEEELAQMDD 71 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFL-KQWVPAGKSPICGNSIGQDRRFLFKY 119 + H +SGL E+++ S + +EAE A L + K PA +P+ GNSI DR F+ + Sbjct: 72 FVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNSIATDRAFIREQ 131 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHF 178 MP L+ HYR +DVS++KELARRW P + ++G H+A+ DI ES+ EL YYR F Sbjct: 132 MPRLDEALHYRMVDVSSVKELARRWYPRVYYKQPEKGLAHRALADIVESIRELDYYRRSF 191 Query: 179 I 179 Sbjct: 192 F 192 >UniRef50_Q17819 Probable oligoribonuclease n=3 Tax=Caenorhabditis RepID=ORN_CAEEL Length = 193 Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/177 (49%), Positives = 115/177 (64%), Gaps = 2/177 (1%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E +IWID EMTGLD E+ + EIA +VTD+ LN +A GP I +HQ E L M++W Sbjct: 12 EQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRN 71 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 T +GL+E++ AS +AE ++FLK GKSPI GNSI DR F+ KYMP+L+ Sbjct: 72 TFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLD 131 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREH-FIK 180 + HYR +DVST+K L +RW P+ KQ TH+A DDI ES+AEL YRE F+K Sbjct: 132 KFAHYRCIDVSTIKGLVQRWYPDYKHP-KKQCTHRAFDDIMESIAELKNYRESIFVK 187 >UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei RepID=ORN_TROWT Length = 184 Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 82/180 (45%), Positives = 120/180 (66%), Gaps = 3/180 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ ++L+W+D EMTGL+PERD ++E+A +VTD +L L EG + V S E L MD+ Sbjct: 3 VAPTPSHLVWVDCEMTGLNPERDELLEVAVVVTDKDLLPLDEGVNVVVSPSSEALGAMDN 62 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + R H SGL++ + ++ + EA+ E++ + V G + GNSI DR F+ +YM Sbjct: 63 YVARMHRVSGLLDEL-SNGVPVSEAQAMVKEYITKHVKTG-GIMSGNSIATDRLFITRYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFI 179 P++ A HYR +DVS++KELA RW PEI G K+G H+AM D+ ES+AELAYYREHF+ Sbjct: 121 PDVHAILHYRMIDVSSIKELAVRWAPEIYSGAPNKKGGHRAMADVLESIAELAYYREHFL 180 >UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA Length = 215 Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/170 (48%), Positives = 111/170 (65%), Gaps = 2/170 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L+WID EMTGLD D++IEIA LVTDA+LNIL +G + +H D L+ M D H+ Sbjct: 5 LVWIDCEMTGLDLGPDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVADMHS 64 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKS-PICGNSIGQDRRFLFKYMPELEAY 126 SGL E V+AST+ AE L+++ + V K+ P+ GNSI DR F+ + MP L+A+ Sbjct: 65 RSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAGNSIATDRSFIARDMPALDAF 124 Query: 127 FHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYR 175 HYR +DVS++KEL RRW P I G +G H+A+ DI ES+ EL YYR Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPPKGLAHRALADIHESIRELQYYR 174 >UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_ARATH Length = 222 Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 83/174 (47%), Positives = 112/174 (64%), Gaps = 1/174 (0%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L+WIDLEMTGL+ E DRI+EIA ++T+ +L EGP + V Q+ + L MDDW H Sbjct: 46 LVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKMDDWCQTHHG 105 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 ASGL ++V S + +REAE +EF+K+ V +G + GNS+ D FL KYMPEL A F Sbjct: 106 ASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLKKYMPELAALF 165 Query: 128 HYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 + +DVS++K L RW P E K+ H+AMDDIRES+ EL YY++ K Sbjct: 166 PHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYYKKTIFK 219 >UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=Q0RPW6_FRAAA Length = 256 Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 81/175 (46%), Positives = 112/175 (64%), Gaps = 2/175 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + L+WID EMTGLD D ++E+A LVTD+ LNIL EG + + DE L M Sbjct: 16 DRLVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIDLVISAPDEALEAMVPVVREM 75 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELE 124 H +SGL V+AST+ +A+ L++++ VP K+P+CGNSI DR FL +YMP L+ Sbjct: 76 HQSSGLTAAVRASTLTLADAQAQVLDYVRARVPEVRKAPLCGNSIATDRTFLARYMPALD 135 Query: 125 AYFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYREHF 178 A+ HYR +DVS++KELARRW K+G H+A+ DI+ES+ EL YYR+ Sbjct: 136 AHLHYRMIDVSSIKELARRWYVRTYYAAPVKRGGHRALADIQESIEELRYYRQAL 190 >UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=D1NUV9_9BIFI Length = 219 Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 119/180 (66%), Gaps = 3/180 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 SA ++ LIWID EMTGLD D + E++ + TD LN+L EG + S + + M+D+ Sbjct: 11 SAQQSRLIWIDCEMTGLDIFHDELCEVSVVPTDFELNVLDEGIDFVIKPSKDAVDHMNDF 70 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKYM 120 HT SGL+ + + M +EAELA ++++K++ P G P+ GNSIG D++FL +YM Sbjct: 71 VRAMHTRSGLITEWE-TGMDVKEAELAVIDYVKKFTPEGVKPLLAGNSIGSDKKFLDRYM 129 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 P L + HYR +DVSTLKELARRW P++ ++ K G H+A+ DI ES+ EL YYRE F+ Sbjct: 130 PGLMEHLHYRVVDVSTLKELARRWYPQVYMNRPAKNGGHRALADIIESLDELRYYREAFM 189 >UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribonuclease n=1 Tax=Apis mellifera RepID=UPI0000DB7BA5 Length = 212 Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 71/171 (41%), Positives = 108/171 (63%), Gaps = 1/171 (0%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++W+D+EM+GLD +I+EIA ++TD NL +++ I +HQSDE L M+DW + TH Sbjct: 31 IVWLDMEMSGLDINTSQILEIACVITDKNLKTVSKDLNIVIHQSDEILNNMNDWCLATHQ 90 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +GL+ + S + ++AE L++LK +V P+ G+S+ DR FL KYMP + Y Sbjct: 91 KTGLIHESRLSKITIQDAEQILLKYLKTYVKEATCPLAGSSVYIDRMFLHKYMPLVNNYL 150 Query: 128 HYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR +D ST+KEL +RW I K H+A+ DI+ES+ EL YY+ + Sbjct: 151 HYRIIDTSTIKELIKRWNINI-TILKKDHNHRALSDIKESIKELQYYKSNI 200 >UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms RepID=ORN_PROAC Length = 202 Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 83/172 (48%), Positives = 114/172 (66%), Gaps = 5/172 (2%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L+WID EMTGLD D +IE+A LVTD LN+ EG + + + L M+D+ HT Sbjct: 2 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 61 Query: 68 ASGLVERV-KASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEA 125 SGL+ + K TM +A+ L++++ +VP AGK+P+ GN+IG DR FL K MP+LE+ Sbjct: 62 TSGLLAELDKGLTMA--QAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLAKDMPKLES 119 Query: 126 YFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYRE 176 Y HYR +DVS++KELARRW P KQG H+A+ DI+ES+ EL Y+RE Sbjct: 120 YVHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWRE 171 >UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta RepID=Q7XVQ9_ORYSJ Length = 249 Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 1/174 (0%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L+WIDLEMTGLD +DRI+EIA ++TD L EGP + + QS E + M++W H+ Sbjct: 71 LVWIDLEMTGLDITKDRILEIACIITDGKLTKRIEGPDLVIRQSKECVNDMNEWCKVHHS 130 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 ASGL E+V S + + +AE L+F+++++ + I GNS+ D FL KYMP L A F Sbjct: 131 ASGLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAGNSVYMDLLFLKKYMPHLAAIF 190 Query: 128 HYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 + +DVS++ L RW P E K+ H+AMDDIRES+ EL YY+E+ K Sbjct: 191 SHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKENIFK 244 >UniRef50_C5KG86 Oligoribonuclease, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KG86_9ALVE Length = 204 Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/187 (42%), Positives = 117/187 (62%), Gaps = 14/187 (7%) Query: 4 NENNLIWIDLEMT------GLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL 57 N+ L+W+D EMT G+ E DR++E+A +VTD +LN+L EGP + +HQ E L Sbjct: 8 NDGVLLWVDCEMTNLGDAYGVLGETDRLLEVALIVTDKHLNVLHEGPDLVIHQPTEVLNG 67 Query: 58 MDDWNVRTH-------TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIG 110 M+DW + + L E V ST+ + EA+ E ++V G+ + GN++ Sbjct: 68 MNDWCRKQFGWKNGQPVPAMLAEEVLKSTISEGEADRQLAEVAAEFVKEGQGLLAGNTVH 127 Query: 111 QDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVA 169 D+RFL KYMP Y HYR LDVST+KELA+RW PE L+ FT K+ TH+A++DI++S+ Sbjct: 128 VDKRFLEKYMPRFSGYLHYRVLDVSTIKELAKRWDPETLEAFTGKRATHRALEDIQDSIN 187 Query: 170 ELAYYRE 176 EL +YR+ Sbjct: 188 ELKHYRD 194 >UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JVJ0_SCHJY Length = 187 Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 73/179 (40%), Positives = 115/179 (64%), Gaps = 2/179 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 +A + L+W+D EMTGL+ +D ++E+A ++TD +LN + E +H D++L M+DW Sbjct: 3 AALRSPLVWVDCEMTGLEVGKDVLMEVAAIITDGDLNPIEEKFEETIHVDDDKLRQMNDW 62 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSP-ICGNSIGQDRRFLFKYM 120 + H ASGL ER + + E L ++++++P + I GNS+ D RFL M Sbjct: 63 CIDHHGASGLTERCRQCKQSVNQVEQKLLNYIQKYIPRRREALIAGNSVHADVRFLTVEM 122 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 P++ + HYR +DVST+KEL RRW+P+I F K+ H+A+ DI ES+AEL YYR+H++ Sbjct: 123 PKVIEHLHYRIIDVSTIKELCRRWRPDI-PPFKKRLAHRALSDIEESIAELKYYRQHWL 180 >UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q099_IXOSC Length = 171 Score = 148 bits (374), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 71/137 (51%), Positives = 92/137 (67%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N L+WIDLE+TGL+ E +I+EIA LVTD LN+L+EG IA+HQ DE L M+DW Sbjct: 35 NGLVWIDLELTGLELETCKIMEIACLVTDGQLNLLSEGIDIAIHQPDEVLEGMNDWCKEH 94 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 H SGL + + S++ EAE L + Q VP GK + GN++ DR FL +YMPEL + Sbjct: 95 HGKSGLTQACRESSVTVEEAEQRVLSLVSQLVPPGKCHLAGNTVYMDRLFLARYMPELNS 154 Query: 126 YFHYRYLDVSTLKELAR 142 Y HYR +DVST+KEL R Sbjct: 155 YLHYRIVDVSTVKELCR 171 >UniRef50_Q22ZB0 Exonuclease family protein n=2 Tax=Oligohymenophorea RepID=Q22ZB0_TETTH Length = 190 Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 110/177 (62%), Gaps = 3/177 (1%) Query: 8 LIWIDLEMTGLD-PERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 L+W D EMTGL+ D+IIEIATL+TD L + +GP + + E L MD+W TH Sbjct: 14 LLWCDCEMTGLNFLNNDQIIEIATLLTDGELTQVIKGPELIIQAPKELLESMDEWCTNTH 73 Query: 67 TASGLVERVKASTMGDREAELATLEFLK-QWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 SGL ++V S + + AE ++FLK + ++ + GNSI D +F+ K MP L Sbjct: 74 KGSGLYDKVLKSEVTLQMAEEQVIKFLKDNGIEQKEALLAGNSIHADMKFIQKQMPNLYN 133 Query: 126 YFHYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 + HYR +DVST+KEL +RW PEIL K+G H+A+DDI ES+ EL +YR+ K+ Sbjct: 134 FLHYRLVDVSTVKELTKRWNPEILKKAPVKKGGHRALDDILESIEELKFYRKEVFKI 190 >UniRef50_O94626 Probable oligoribonuclease n=1 Tax=Schizosaccharomyces pombe RepID=ORN_SCHPO Length = 180 Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 114/180 (63%), Gaps = 2/180 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS + L+WID EMTGL+ + ++E+A ++TD NL + E + ++QL+ M+D Sbjct: 1 MSNLKQPLVWIDCEMTGLEVGKHVLMEVAAIITDGNLRPVEEKFDAVIKLDEKQLSEMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSP-ICGNSIGQDRRFLFKY 119 W + H SGL ER + S + ++ E L ++K+++P + I GNS+ D RFL Sbjct: 61 WCIEQHGKSGLTERCRQSNLTVKDVENQLLAYIKKYIPKKREALIAGNSVHADVRFLSVE 120 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 MP++ + HYR +DVST+KELA+RW P+I + K+G H+A+ DI ES+ EL +YR +++ Sbjct: 121 MPKIIEHLHYRIIDVSTIKELAKRWCPDI-PAYDKKGDHRALSDILESIGELQHYRSYWL 179 >UniRef50_A1A0K1 Oligoribonuclease n=8 Tax=Bifidobacterium RepID=A1A0K1_BIFAA Length = 217 Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/177 (44%), Positives = 112/177 (63%), Gaps = 4/177 (2%) Query: 6 NNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + LIWID EMTGLD D ++E++ + TD +LN+L EG + S + + M+D+ Sbjct: 15 SRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSQKAVDHMNDFVRA 74 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKYMPEL 123 HT SGL+ + D EA+ +E+++++ PAG P+ GN+IG D++FL YMPEL Sbjct: 75 MHTRSGLINEWEHGLSLD-EAQAKVIEYVRKFTPAGVKPLLAGNTIGSDKKFLDHYMPEL 133 Query: 124 EAYFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 HYR +DVST KELARRW P + L+ K G H+A+ DI ES+ EL YYR+ F+ Sbjct: 134 MENLHYRTIDVSTFKELARRWYPAVYLNRPPKNGGHRALADIIESLDELRYYRKAFM 190 >UniRef50_Q8G3N5 Oligoribonuclease n=10 Tax=Bifidobacteriaceae RepID=ORN_BIFLO Length = 216 Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 77/181 (42%), Positives = 115/181 (63%), Gaps = 4/181 (2%) Query: 2 SANENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 SA ++ LIWID EMTGLD D ++E++ + TD +LN+L EG + S++ + M+D Sbjct: 11 SAKDSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSEKAVNHMND 70 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKY 119 + + HT SGL+ + + + EAE E++ ++ P G P+ GN+IG D++FL Y Sbjct: 71 FVRQMHTRSGLINEWE-NGLSLAEAEQKVTEYVLRFTPEGVRPLLAGNTIGSDKKFLDHY 129 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHF 178 MP L ++ HYR +DVST KELARRW P + + K G H+A+ DI ES+ EL YYR+ F Sbjct: 130 MPNLMSHLHYRSVDVSTFKELARRWYPAVYENRPPKNGGHRALADIIESLDELRYYRKAF 189 Query: 179 I 179 + Sbjct: 190 M 190 >UniRef50_Q1CWF9 Oligoribonuclease n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CWF9_MYXXD Length = 183 Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 106/180 (58%), Gaps = 1/180 (0%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M ++E +W+DLEMTGLDPE IIE+ ++T +L +AE + + Q +E L M+ Sbjct: 1 MISSEQRFVWLDLEMTGLDPETCSIIEVGVIITGPDLRPIAEIERV-IWQPEEVLLRMEP 59 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 HT + L+E+V+AS R AE + + + G+ + GNSI DRRFL +YM Sbjct: 60 VVREMHTRNELLEKVRASNTSLRVAERDVMALVTEHCALGEGILAGNSIHTDRRFLIRYM 119 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P LE Y HYR +DV++LK L R W P +++ H A+ D+R S++EL YYR+ + Sbjct: 120 PLLERYLHYRMVDVTSLKVLTRAWYPNLVEPRKAPSGHTALADVRASISELQYYRDTLFR 179 >UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NXF4_HAEIN Length = 115 Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 66/94 (70%), Positives = 80/94 (85%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS ++ NLIWIDLEMTGLDPE++RIIEIAT+VTD NLNILAEGP +AVHQSDE L M+D Sbjct: 1 MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLK 94 W +TH+ +GL+ERVKAS + +R AEL TL+FLK Sbjct: 61 WCQKTHSENGLIERVKASKLTERAAELQTLDFLK 94 >UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E428 Length = 196 Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 100/168 (59%), Gaps = 1/168 (0%) Query: 9 IWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 IWIDLEMTGL+PE D I+E+A ++T+ +LN L EG +HQ+D L M++W + H Sbjct: 24 IWIDLEMTGLNPETDTILEVACIITEPDLNPLNEGMHFVIHQNDNVLKSMNEWCLVHHEK 83 Query: 69 SGLVERVKASTMGDREAELATLEFLK-QWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 SGL+ +AS ++ E ++K G + + GNS+ D FL KYMP + + Sbjct: 84 SGLISESRASPHSLKDVEEKLFNYIKSNTFIDGTNYLAGNSVYMDLLFLKKYMPSIPTFL 143 Query: 128 HYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYR 175 HYR +DVS+LK L W L K+ +H+A+DDI+ S+ EL Y+ Sbjct: 144 HYRLIDVSSLKVLCNHWYSYELKNCKKEVSHRALDDIKNSIQELKTYK 191 >UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7 RepID=A5KRR8_9BACT Length = 184 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/169 (44%), Positives = 106/169 (62%), Gaps = 5/169 (2%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 L+W+DLEMTGLDP+RDR++E+A + TD N +A ++ VHQS + L LMDDW H Sbjct: 12 KLLWLDLEMTGLDPQRDRVLEVAAIATDWNFEEMAVIESV-VHQSPKVLDLMDDWVRSQH 70 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKYMPELEA 125 +SGL ERV+AS + + +AE L+F+ G + GNSI QDRRF+ +Y L+A Sbjct: 71 ASSGLTERVRASDVSETDAEDILLQFIDSVYKDGDPVVLAGNSIHQDRRFIRQYWQRLDA 130 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYY 174 HYR LDVS K + ++ + F K H+A++DIR S+ EL YY Sbjct: 131 RLHYRMLDVSAWKVV---FEGKYQKRFPKPEDHRALEDIRGSIMELKYY 176 >UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia vitripennis RepID=UPI00015B53D6 Length = 185 Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 1/174 (0%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + +IWIDLEMTGL+ +D+I+E+A+++TD LNI+++ + +HQS++ M W Sbjct: 10 DRIIWIDLEMTGLNVMQDKILEVASIITDDQLNIVSDEFQMVIHQSEDVFETMIPWCQEQ 69 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 H +GL+E + S + AE + F +++VP P+ G+ + DR FL ++MP + Sbjct: 70 HNKTGLIEASRNSIFNEEMAEEELIRFFRKYVPHNTCPLAGSCLYMDRAFLQQHMPRVFE 129 Query: 126 YFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYREHF 178 Y +DVS++ ELA+RW +I K G H+A+ DI++S+ EL+YYR++ Sbjct: 130 YLGDEVIDVSSINELAKRWNKKIERKKQRKTGDHRALGDIKDSIEELSYYRKNI 183 >UniRef50_Q6BKE6 DEHA2F22594p n=4 Tax=Saccharomycetales RepID=Q6BKE6_DEBHA Length = 295 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 107/176 (60%), Gaps = 3/176 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTH 66 L+WID EMTGL+ +D IIEI ++TD NL I+ E G V+Q E L M++W V H Sbjct: 90 LVWIDCEMTGLNVFQDHIIEICCIITDGNLEIIDEKGFESTVYQPKEVLDGMNEWCVNQH 149 Query: 67 TASGLVERVKASTMGD-REAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 SGL ++ + + + E LE++KQ+V K + GNSI D+ F+ + P++ Sbjct: 150 GKSGLTAKILENPQCELSKIEDELLEYIKQYVQPNKGIMAGNSIHMDKFFMMREFPKIID 209 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180 Y HYR +DVS++ E+ R PE++ F KQG H A DI ES+ +L +Y+++++K Sbjct: 210 YLHYRLIDVSSIMEVGYRHNPELMKLFPKKQGNHTARSDILESINQLKWYKQNYLK 265 >UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorpha longicaudata entomopoxvirus RepID=Q8B5Y0_9POXV Length = 206 Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 3/178 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 NN+ W+DLEMTGLDPE D I+EI +T+ L I + + +H SD+ L MD W +T Sbjct: 29 NNIAWLDLEMTGLDPETDNILEIGCFITNDALEITSPIFHMIIHNSDDILKSMDKWCKKT 88 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKYMPELE 124 HT +GL+ V S AE ++F K + K+ I GNSI D+ FL ++MP L Sbjct: 89 HTKNGLITEVMNSKTSLEVAEKKLIQFFKAHASSDKAIILAGNSIYIDKGFLCEHMPRLY 148 Query: 125 AYFHYRYLDVSTLKELARRWKPE-ILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 HYR +DVS+ E+ +R P+ K+ H+A++DI++S+AE+ YY+ FI L Sbjct: 149 PMLHYRVIDVSSFAEIFKRVNPQKYAQRPKKRCIHRAVNDIKDSLAEMQYYKS-FISL 205 >UniRef50_C5DNN6 KLTH0G18590p n=2 Tax=Saccharomycetaceae RepID=C5DNN6_LACTC Length = 323 Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 109/176 (61%), Gaps = 3/176 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTH 66 ++W+D EMTGLD D IIEI ++TD +LNI+ E G +H + + M++W + H Sbjct: 76 IVWVDCEMTGLDHVNDHIIEICCIITDGDLNIIDEAGYESVIHCDKKIMDAMNEWCIDHH 135 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELEA 125 +SGL ++V ST + E L +L++++PA K + GNS+ DR F+ + P++ Sbjct: 136 GSSGLTQKVLDSTKTTGQVEEELLAYLRKYIPAERKGVLAGNSVHMDRVFMMREFPKVID 195 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIK 180 + YR +DVST+ E++ R P++ F K+G H A DI ES+A+L +Y++H++K Sbjct: 196 HLFYRIIDVSTIMEVSFRHNPDLASVFPRKKGAHTARADILESIAQLKWYQDHYLK 251 >UniRef50_A5E684 Oligoribonuclease, mitochondrial n=1 Tax=Lodderomyces elongisporus RepID=A5E684_LODEL Length = 269 Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 10/182 (5%) Query: 8 LIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTI--AVHQSDEQLALMDDWNVR 64 L+W+D EMTGLD DRIIEI +VTD NL +L G ++ E L MD+W Sbjct: 77 LVWVDCEMTGLDVLGEDRIIEICCIVTDENLEVLGNGDYYESTIYYPQETLDKMDEWCQT 136 Query: 65 THTASGLVERV---KASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKYM 120 TH GL++R+ T+ +AEL LEFLK+++ K I GNS+ D+ F+ K M Sbjct: 137 THGQLGLIQRILDNPDRTLEKVQAEL--LEFLKKYISGPKIGIMAGNSVHMDKFFMMKDM 194 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREHFI 179 PE+ + HYR LDVS++ E +R P+++D K +H A DI ES+A+L ++RE++ Sbjct: 195 PEIVEFLHYRLLDVSSIMEFGKRHAPKLMDLQPDKIQSHTAKSDILESIAQLKWFRENYF 254 Query: 180 KL 181 KL Sbjct: 255 KL 256 >UniRef50_A7BDJ9 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDJ9_9ACTO Length = 198 Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 103/163 (63%), Gaps = 2/163 (1%) Query: 15 MTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVER 74 MTGLD +RD +IE+A +VTD +L I+ G + + E L M+D+ HT+SGL++ Sbjct: 1 MTGLDVQRDALIEVAVVVTDGDLTIVDPGMDVLITPPAEALDNMNDFVRNMHTSSGLLDD 60 Query: 75 VKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLD 133 ++ S + EA L ++K++VP GK+ + GNS+G D+ FL MP + + HYR +D Sbjct: 61 LQTSGVSMEEATEQVLSYIKRFVPQQGKALLAGNSVGTDKMFLEANMPSVIDHLHYRLVD 120 Query: 134 VSTLKELARRW-KPEILDGFTKQGTHQAMDDIRESVAELAYYR 175 VS++KELA+RW + + K G H+A+ DI ES+ EL YYR Sbjct: 121 VSSIKELAKRWYRVAFAESPDKHGGHRALADILESIQELEYYR 163 >UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFP7_9BACT Length = 193 Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 75/171 (43%), Positives = 106/171 (61%), Gaps = 14/171 (8%) Query: 9 IWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 WIDLEMTGLDP DRI+E A ++T+ L + E + AV Q E L M+DW H Sbjct: 7 CWIDLEMTGLDPATDRIVEAAVIITNKQLEPVFEWES-AVRQPQEVLEGMNDWCKHHHAE 65 Query: 69 SGLVERVK----ASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 SGL++R++ + D+ AE+ TL++ K+ P I GNSI QDR+F+ +Y+P+ Sbjct: 66 SGLLDRIQDGITEEELDDKLAEI-TLKYFKKNNPCV---IAGNSIAQDRKFIDRYLPKFS 121 Query: 125 AYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYY 174 HYR LDVS+ K + R E+L F K+ +H+A+DDIRES+AEL +Y Sbjct: 122 ERIHYRMLDVSSFKIVFR----EMLGREFKKENSHRALDDIRESIAELKHY 168 >UniRef50_C7YHK7 Predicted protein n=5 Tax=Sordariomycetes RepID=C7YHK7_NECH7 Length = 216 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/180 (42%), Positives = 109/180 (60%), Gaps = 5/180 (2%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNIL-AEGPTIAVHQSDEQLALMDD 60 SA+++ L+WID EMTGLD + D I+EI ++T NL IL EG +H +L MDD Sbjct: 14 SASDDPLVWIDCEMTGLDQDNDEILEIYCIITTGNLEILDEEGFHAIIHWPQSRLDQMDD 73 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSP-ICGNSIGQDRRFLFKY 119 W +TH SGL V AST EA A +++ +++P + + GNS+ DR FL + Sbjct: 74 WCTKTHADSGLTAAVLASTTTPEEAASALYDYVTRFIPDRRRGLLAGNSVHCDRAFLRRE 133 Query: 120 -MPELEAYFHYRYLDVSTLKELARRWKPE-ILDGF-TKQGTHQAMDDIRESVAELAYYRE 176 ++ + H+R LDVS++KE ARRW + I++ K+G H+A DDI ES+ E YYRE Sbjct: 134 PYRKVMKHLHHRILDVSSIKEAARRWCAKRIVNKVPNKKGRHKARDDILESIEEARYYRE 193 >UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturation n=5 Tax=Saccharomycetaceae RepID=C4R594_PICPG Length = 213 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/174 (34%), Positives = 101/174 (58%), Gaps = 1/174 (0%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++WID EMTGLD D I+EI ++TD NL ++ EG +H ++ ++ M++W + H Sbjct: 38 IVWIDCEMTGLDIYNDHIVEICCIITDQNLEVVDEGYESVIHYDNDVMSKMNEWCIEHHG 97 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 SGL ++V ST + E L ++ Q + + GNSI D+ F+++ P++ Y Sbjct: 98 TSGLTKKVLESTKTLPQVESELLSYISQHIEPNTGVMAGNSIHMDKFFMYREFPKVIDYL 157 Query: 128 HYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 YR +DVST+ E+ +R P +L K+ H A DI ES+ +L +++ H++K Sbjct: 158 FYRLIDVSTIYEVCKRHNPALLRTAPRKKAAHTAKADILESIQQLKWFQTHYLK 211 >UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus clemensi RepID=C1C170_9MAXI Length = 230 Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 103/178 (57%), Gaps = 3/178 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S N L+WID EMTGLD E+D ++E+A +VTD++L + G + +HQ D L M ++ Sbjct: 48 STNLRRLVWIDCEMTGLDIEKDVLMEVAVIVTDSSLREVTPGINLIIHQPDSILNAMTEF 107 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPA--GKSPICGNSIGQDRRFLFKY 119 +H +GL E +AS + R AE ++Q + G + GNS+G D +FL KY Sbjct: 108 PEESHALTGLTEACRASQIDLRNAEDQICRHIRQGLSGTTGTPLLAGNSVGHDLKFLQKY 167 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYRE 176 MP ++ HY+ LDVS++ + W +L K+ H+AM+DI+ES+ E+ ++ Sbjct: 168 MPAVKDLLHYKILDVSSINSCYQLWNKSVLHQCPKKKRLHRAMEDIKESIEEMKVLKD 225 >UniRef50_A3D8L9 Exonuclease, RNase T and DNA polymerase III n=4 Tax=Shewanella baltica RepID=A3D8L9_SHEB5 Length = 204 Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 104/190 (54%), Gaps = 18/190 (9%) Query: 5 ENNLIWIDLEMTGLDPERDR---------IIEIATLVTDANLNILAEGPTIAVHQSDEQL 55 E ++ DLE GL+ D I E+A +VTD+ LN + E + VHQ DE + Sbjct: 2 EQFFLFGDLETGGLNGRLDNGMLGMEYYPIFELAFIVTDSELNQVGEALHVVVHQDDEHI 61 Query: 56 ALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQW-VP----AGKSPI--CGNS 108 A +W + HT SGL+ V+AS++ +AE +E LK +P K+ + GNS Sbjct: 62 ARSHEWAIDVHTKSGLLAAVRASSVSLAQAEQMVIEHLKALGIPKHDRKAKTGVVFAGNS 121 Query: 109 IGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGF--TKQGTHQAMDDIRE 166 I DR F+ MPEL Y HYR LD+S L AR W PE+ KQ H+A+ DIRE Sbjct: 122 IMFDRSFIMCQMPELHEYMHYRQLDISALGLAARAWAPEVERNAIKAKQYQHEALADIRE 181 Query: 167 SVAELAYYRE 176 S+AEL YYR+ Sbjct: 182 SIAELKYYRD 191 >UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y8A3_CLAL4 Length = 283 Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/179 (37%), Positives = 110/179 (61%), Gaps = 8/179 (4%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTH 66 L+WID EMTGLD +D IIEI ++TD NLNI+ E G V+ + L M++W V H Sbjct: 35 LVWIDCEMTGLDIAKDHIIEICCIITDGNLNIIDEKGYESTVYVPKKVLDSMNEWCVNQH 94 Query: 67 TASGLVERVKAS---TMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKYMPE 122 SGL +V A+ T+ + EL L++++ ++P + S + GNS+ D+ F+ K P+ Sbjct: 95 GKSGLTAKVLANPQQTLAKVQQEL--LDYIQFYIPEPRTSLLAGNSVHMDKFFMMKEFPQ 152 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIK 180 + + HYR +DVS++ E+ R P ++ F K+G H A DI ES+ +L +Y++++++ Sbjct: 153 VIDHLHYRLVDVSSIMEVGFRHNPALMKCFPRKKGNHTAKSDILESINQLKWYQDNYLR 211 >UniRef50_C9SMP6 Oligoribonuclease n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SMP6_VERA1 Length = 212 Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/170 (42%), Positives = 105/170 (61%), Gaps = 9/170 (5%) Query: 14 EMTGLDPERDRIIEIATLVTDANLNILAEGPT--IAVHQSDEQLALMDDWNVRTHTASGL 71 +MTGLDP+ + I+EI ++T NL L +GP + VHQ +L M +W H +GL Sbjct: 15 DMTGLDPDTEEILEIHCIITTGNLEPL-DGPGWGVVVHQPASRLDQMGEWCTDMHAKTGL 73 Query: 72 VERVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFK--YMPELEAYFH 128 E V AST ++A L ++++VP K + GN++ DR FL K Y P +E + H Sbjct: 74 TEAVLASTTTPQQAAEGLLAHIRKYVPTPKVGLLAGNTVHADRGFLAKQPYTPIVE-HLH 132 Query: 129 YRYLDVSTLKELARRWKP-EILDGF-TKQGTHQAMDDIRESVAELAYYRE 176 +R +DVS+LKE A+RW P EI++G K GTH+ +DI+ES+AE YYRE Sbjct: 133 HRIVDVSSLKEAAKRWCPREIVEGAPVKTGTHRGREDIKESIAEARYYRE 182 >UniRef50_Q6MNB4 Oligoribonuclease n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNB4_BDEBA Length = 175 Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/183 (41%), Positives = 101/183 (55%), Gaps = 17/183 (9%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N L WID+EMTGLD E++ IIE+A +VTD N L T+ V Q + L MD WN Sbjct: 2 NKLFWIDMEMTGLDVEKEVIIEVAAIVTDLNFKELETFETV-VKQPQKYLDSMDAWNTEH 60 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWV--PAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +V + M + E ++ +K+ P K + GNSI QDR F+ KYMPE Sbjct: 61 HKKSGLTAKV-PNGMDPDQVEAKLVDMVKKHFPDPKDKPVLAGNSIMQDRLFINKYMPEF 119 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFT----KQGTHQAMDDIRESVAELAYY--REH 177 HYR +DVS+ WK I + F K H+A++DIRES+ EL +Y + H Sbjct: 120 AGRLHYRMVDVSS-------WKVIINNKFKYVYQKANKHRALEDIRESIQELRHYTDKMH 172 Query: 178 FIK 180 F K Sbjct: 173 FTK 175 >UniRef50_A0BKH9 Chromosome undetermined scaffold_112, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BKH9_PARTE Length = 174 Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 2/159 (1%) Query: 23 DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGD 82 DR+ + A ++TD L + +GP I +H + L MD+W TH ASGL + ST+ Sbjct: 11 DRVEQCACILTDYKLKTIIKGPHIVIHADKQVLDGMDEWCTTTHKASGLYQESLNSTVTV 70 Query: 83 REAELATLEFLKQ-WVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELA 141 +A+ L+FL Q +P P+ GNS+ DR F+ K+MP+L+ + HYR +DVS++K L Sbjct: 71 GQAQEQILQFLNQNNIPPKVLPLAGNSVYMDRLFVMKHMPQLDQFLHYRIVDVSSIKLLC 130 Query: 142 RRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFI 179 + P + K+ H+A+DDI ES+ EL YY+E F+ Sbjct: 131 QNLNPIVCSQQPQKKLNHRALDDILESIEELRYYQEKFM 169 >UniRef50_A6DMP4 Oligoribonuclease n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMP4_9BACT Length = 182 Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/171 (40%), Positives = 100/171 (58%), Gaps = 9/171 (5%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N L WID+EMTGLDP+ +RI+EIA L+TD L+I+ + + L MD+WN RT Sbjct: 2 NKLFWIDMEMTGLDPDENRILEIAILITDHKLDIIDRFHAV-IRTPKAILDGMDEWNTRT 60 Query: 66 HTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 HT++GLV E V + +E E+ L + + +CG+S+ DR F+ K+MP Sbjct: 61 HTSNGLVKEAVNGRFI--QEVEIDLLNLADKHFANKQIFLCGSSLSLDRMFIEKFMPSFA 118 Query: 125 AYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYY 174 HYR +DVS+ K + + + LD F KQ H+AM+DI ES+ EL Y Sbjct: 119 KKLHYRIVDVSSWKAIFQTF----LDLRFHKQDAHRAMNDIEESLRELKLY 165 >UniRef50_C4YJB7 Oligoribonuclease, mitochondrial n=3 Tax=Saccharomycetales RepID=C4YJB7_CANAL Length = 237 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 110/180 (61%), Gaps = 9/180 (5%) Query: 8 LIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRT 65 L+W+D EMTGLD D IIEI ++T+ +L+I+ E G ++ +L M++W + T Sbjct: 29 LVWVDCEMTGLDVFGDDNIIEICCIITNEDLDIVDENGYESTIYYPKSRLDKMNEWCIET 88 Query: 66 HTASGLVERVKASTMGDRE---AELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKYMP 121 H SGL +++ A+ DR+ E LE++K++VP ++ + GNS+ DR F+ K P Sbjct: 89 HGKSGLTDKILANP--DRKLSVVEDELLEYIKKYVPEVRTGLLAGNSVHMDRFFMMKEFP 146 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYREHFIK 180 ++ + HYR +DVS++ E R P+++ F K+ G H A DI ES+ +L +YR+++ K Sbjct: 147 KVIDHLHYRNVDVSSIMEFGYRHNPKLMKMFPKKTGAHTAKSDILESIEQLKWYRKYYFK 206 >UniRef50_P54964 Oligoribonuclease, mitochondrial n=8 Tax=Saccharomycetaceae RepID=ORN_YEAST Length = 269 Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 9/182 (4%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNIL--AEGP-----TIAVHQSDEQLALMDD 60 L+WID EMTGLD DRIIEI ++TD +L + A+G +H E + M++ Sbjct: 55 LVWIDCEMTGLDHVNDRIIEICCIITDGHLAPVKAADGQGDSHYESVIHYGPEVMNKMNE 114 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKY 119 W + H SGL +V AS + E LE++++++P + GNS+ DR F+ + Sbjct: 115 WCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDKNVGVLAGNSVHMDRLFMVRE 174 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYREHF 178 P++ + YR +DVS++ E+ARR P + K+ H A DI+ES+A+L +Y +++ Sbjct: 175 FPKVIDHLFYRIVDVSSIMEVARRHNPALQARNPKKEAAHTAYSDIKESIAQLQWYMDNY 234 Query: 179 IK 180 +K Sbjct: 235 LK 236 >UniRef50_B6HCA9 Pc18g01380 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HCA9_PENCW Length = 245 Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 99/169 (58%), Gaps = 7/169 (4%) Query: 14 EMTGLDPERDRIIEIATLVTDANLNIL-AEGPTIAVHQSDEQLALMDDWNVRTHTASGLV 72 +MTGL+PE D+I++I +TDA LN+L G +H D L M W + TH +GL Sbjct: 74 KMTGLNPETDKILQICCFITDAQLNLLEPTGFETVIHVPDSTLDAMSQWCIDTHGRTGLT 133 Query: 73 ERVKASTMGDREAELATLEFLKQWVPAGKSP-ICGNSIGQDRRFL--FKYMPELEAYFHY 129 V+AST A + L +++Q VP ++ + GNS+ D+ FL Y L+ + HY Sbjct: 134 AAVRASTTSPSTAADSLLAYIRQHVPTPRTALLAGNSVHADKAFLACAPYSQVLD-HLHY 192 Query: 130 RYLDVSTLKELARRW-KPEILDGFT-KQGTHQAMDDIRESVAELAYYRE 176 R LDVS+LKE ARRW ++L+ K+ H A DDI ES+ E+ +Y++ Sbjct: 193 RILDVSSLKEAARRWGSDQLLEQVPRKREVHLARDDILESIEEIRFYKD 241 >UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycotina RepID=Q5KPH7_CRYNE Length = 184 Score = 111 bits (278), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 1/146 (0%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ L+W+D EMTGLD DRIIEIA ++TD LN + G + + E L M DW Sbjct: 9 DDGPLVWVDCEMTGLDFLNDRIIEIAVIITDGRLNPVDGGISYIIKTPKEVLDNMGDWCR 68 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPE 122 H SGL++ S L+++++W+P G + G+S+ D RF+ MPE Sbjct: 69 EQHGKSGLIQACLDSPYSYDTVVEKVLDYIRRWIPERGAGLLAGSSVHADMRFMLMGMPE 128 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEI 148 + + YR LDVS++KE+ RRW P++ Sbjct: 129 VMKHLSYRILDVSSVKEICRRWYPKV 154 >UniRef50_Q4P645 Putative uncharacterized protein n=3 Tax=Ustilaginomycotina RepID=Q4P645_USTMA Length = 606 Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 13/187 (6%) Query: 1 MSANENNLIWIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 +SA++ L+WID EMTGL E DR++EIA ++TD LN + G + + L M+ Sbjct: 416 LSASDGPLVWIDCEMTGLSVENGDRLLEIACIITDGQLNPIDSGVSYVISTPQSVLDGMN 475 Query: 60 DWNVRTHTASGLVERVKASTMGDREAEL--ATLEFLKQWVPAGKSP-ICGNSIGQDRRFL 116 W V H SGL + A + A L +++ +P + + GN++ D+ FL Sbjct: 476 HWCVNQHALSGLTAECLDANRSYPHASVRTAILAYVRDRIPTPNTACLAGNTVHADKAFL 535 Query: 117 FKYMPELEAYFHYRYLDVSTLKELARR-------WKPEILDGFTKQGTHQAMDDIRESVA 169 MPEL + HYR +DVS++KEL +R W P + H+A++DI S+ Sbjct: 536 HAEMPELIHHLHYRIVDVSSIKELVKRWYGDNKLWNPS--EPPKHMPNHRALNDINASIQ 593 Query: 170 ELAYYRE 176 EL +YR Sbjct: 594 ELKWYRS 600 >UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SLB2_TETNG Length = 248 Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 47/102 (46%), Positives = 69/102 (67%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++W+DLEMTGLD E+D+IIE+A L+TD++LNILAEGP + ++Q DE L M +W H Sbjct: 6 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWCKEHHG 65 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI 109 SGL + V+ S + +AE L F++Q P G+ P+ G + Sbjct: 66 KSGLTQAVRNSKITLEQAEYEFLSFVRQHTPPGQCPLAGGQL 107 >UniRef50_A4V739 Plant-inducible oligoribonuclease n=2 Tax=Pseudomonas fluorescens RepID=A4V739_PSEFS Length = 195 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 9/182 (4%) Query: 1 MSANENNLIWIDLEMTGLDPERDR------IIEIATLVTDANLNILAEGPTIAVHQSDEQ 54 M+ ++ L W+DLE TG DR I+EI +VTD + +LA + Sbjct: 6 MTRSQRRLPWLDLETTGFTELFDRRVYEHRILEIGAVVTDEHFTVLASTSIVIQQPMVRV 65 Query: 55 LALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQ-WVPAGKSPICGNSIGQDR 113 L L D+ R HT +GL + V S + AE ++F +Q V P+CG+ I DR Sbjct: 66 LELSDEAVTRMHTNNGLFDEVVKSFTTLKAAEHQLIQFYRQNGVSKKVEPLCGSGIHFDR 125 Query: 114 RFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAY 173 F+ MPEL + +YR LD+S++KE + P +K+ H+A+ DI ESVAE Sbjct: 126 MFIEAQMPELHDFLYYRNLDISSVKEFLKTISPSFEP--SKRQQHRALPDILESVAEAKT 183 Query: 174 YR 175 YR Sbjct: 184 YR 185 >UniRef50_B8HIN1 Putative oligoribonuclease n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HIN1_ARTCA Length = 199 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 96/188 (51%), Gaps = 13/188 (6%) Query: 1 MSANENNLIWIDLEMTGLDPERDRI-IEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 ++AN +N++W+D E TGL + + +E A ++TD LN LA I +H ++E+LA M Sbjct: 3 ITANPDNILWVDYEATGLMSDPFTVPLEGAAIITDGQLNELAVLEGITIHATEEELAYMG 62 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSP-----------ICGNS 108 D+ HT +GL+++V+AST+ + + A F + P I GNS Sbjct: 63 DFVRDMHTKTGLLDKVRASTVTRDQFDNALASFAAPYFPTKGEELADGTKYRGMVIGGNS 122 Query: 109 IGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRES 167 + D K+ P+ YR +D+S L EL RRW + K H A+ DIR Sbjct: 123 VKFDFDVTEKFFPQTRKNMDYRVIDISGLGELVRRWSYDYWKAMPPKLSDHTALTDIRAG 182 Query: 168 VAELAYYR 175 V EL YYR Sbjct: 183 VNELRYYR 190 >UniRef50_Q2HAN9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HAN9_CHAGB Length = 228 Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 55/219 (25%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVR 64 + L+WID EMTGLDPE D IIEI ++TD L +L E G VHQ+ E++ +MD+W R Sbjct: 17 DPLVWIDCEMTGLDPETDAIIEIYCIITDGQLKLLDESGWGTVVHQTKEKMGMMDEWCTR 76 Query: 65 T------------------HTA------------------------SGLVERVKASTMGD 82 H A SGL V ST+ Sbjct: 77 VRMSRPMLLFVSGLDTSIFHPARGSSSSMGKNGWGTVAKQSVVDGESGLTAAVIQSTVTP 136 Query: 83 REAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELA 141 ++A L ++++++P G++ + GNS+ D+ FL K P L D + Sbjct: 137 QQAADGLLAYIQKYIPERGQALLSGNSVHADQAFLRKGPPGLVPTSMPTSSDPQVALTVP 196 Query: 142 RRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 R K+GTH+A DDI ES+ E YYR + Sbjct: 197 R-----------KKGTHKAKDDILESIEEAKYYRSAIFQ 224 >UniRef50_Q0UIM9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UIM9_PHANO Length = 473 Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 5/150 (3%) Query: 26 IEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDRE 84 + +A VTDA++N+L E G +H S EQL M +W H SGL + ST + Sbjct: 1 MSLAAFVTDADMNLLDESGYEAVIHHSREQLDRMGEWCTSHHGDSGLSQDCLDSTTTAEQ 60 Query: 85 AELATLEFLKQWVPAGKSP-ICGNSIGQDRRFLFKYMPELEA-YFHYRYLDVSTLKELAR 142 A LE++K++VP ++ + GNS+ D+ FL K ++ + HYR LDVS++KE AR Sbjct: 61 AAEGLLEYIKKYVPERRTGLLAGNSVHADKSFLVKQPYKVVTDHLHYRLLDVSSIKEAAR 120 Query: 143 RWKP-EILDGFT-KQGTHQAMDDIRESVAE 170 RW P ++L KQ H+A DI ES+ E Sbjct: 121 RWAPKDVLKKIPRKQMLHEARADILESIEE 150 >UniRef50_Q8QNE0 EsV-1-139 n=1 Tax=Ectocarpus siliculosus virus 1 RepID=Q8QNE0_ESV1 Length = 274 Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 95/226 (42%), Gaps = 53/226 (23%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 NE WID+E TGLD + + I+EI +VTD +LN + + H +A W Sbjct: 39 NEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSTWCR 98 Query: 64 -----RTHTASGLVERVKASTMGDREAELATLEFLKQWVP-------------------- 98 R +GL E S + EAE F + Sbjct: 99 KKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTSQITSSQPFFDR 158 Query: 99 ---------------------------AGKSPICGNSIGQDRRFLFKYMPELEAYFHYRY 131 K + G+++ DR FL KY P L+ +FHYR Sbjct: 159 TLGANGTFIGASDTSRYHHQHHPRRSNFKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRV 218 Query: 132 LDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYRE 176 +DVST E+ RRW+P++ ++ G+H+A DDI +S++ + +++E Sbjct: 219 VDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKE 264 >UniRef50_C7TNW1 Putative uncharacterized protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=C7TNW1_9BILA Length = 108 Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Query: 85 AELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRW 144 + + L FL++ P+ GNS+ RRF+ KYMP LE YR +D ST+KELA RW Sbjct: 7 SPVQILAFLEREAVGETCPLAGNSVHFHRRFIMKYMPRLEKRLRYRIVDASTIKELAARW 66 Query: 145 KP-EILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P E+ +K+G H A++DIR S+ EL YYR K Sbjct: 67 YPNELKLAPSKKGAHSALNDIRGSIGELRYYRSSIFK 103 >UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GR95_BIFLI Length = 185 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 11/182 (6%) Query: 1 MSANENN-----LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQL 55 MS ++N+ L+W+D E TGLDP +D I+EI + T +L + +G VH + Sbjct: 1 MSTHDNDDKPVRLLWVDTETTGLDPRKDPILEIGMIATGPDLKPVDDGFHTTVHWEGKPS 60 Query: 56 ALMDDWNVRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDR 113 + H +GL+ E S A L+ +++ + + G + G+++ DR Sbjct: 61 EFIQS----MHGPNGLLAECAHPSAPNMFAAALSARDYVVRHLGQGVRLLPAGSTVRFDR 116 Query: 114 RFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAY 173 L +MP + +R LD+S + E R W P L G H+ M + +++ Sbjct: 117 DMLDSWMPGVLDGCSHRSLDISAVCEAVRMWNPAALPGMEPSTDHRVMHCLADTLRYAHA 176 Query: 174 YR 175 YR Sbjct: 177 YR 178 >UniRef50_UPI00005A0A92 PREDICTED: similar to small fragment nuclease (predicted) n=1 Tax=Canis lupus familiaris RepID=UPI00005A0A92 Length = 161 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/55 (56%), Positives = 41/55 (74%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 +L+MTGLD E+D+IIE+A L+TD++LNILAEGP + + Q DE L M DW H Sbjct: 70 ELQMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHH 124 >UniRef50_A5B9I7 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5B9I7_VITVI Length = 1027 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYRE 176 KYMP+L + F + +DVS++K L RW P + +K+ H+AMDDIRES+ EL YYRE Sbjct: 958 KYMPDLASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAMDDIRESIRELKYYRE 1017 Query: 177 HFIK 180 + K Sbjct: 1018 NIFK 1021 >UniRef50_B5LWG6 Putative oligoribonuclease n=1 Tax=Feldmannia species virus RepID=B5LWG6_9PHYC Length = 250 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 49/218 (22%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN-- 62 N WID+E + LD ++EIA +VTD+ LN+ + H + + +W Sbjct: 20 NNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCKE 79 Query: 63 ---VRTHTASGLVERVKASTMGDREAELATLEFLKQWV--------PAGKSP-------- 103 R++ +GL + S +A L F + + PA KS Sbjct: 80 KFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYSTHEIGRGRPAHKSRTFFDRTSG 139 Query: 104 ---------------------------ICGNSIGQDRRFLFKYMPELEAYFHYRYLDVST 136 + G+++ DRR + K+ P L Y ++ +DV++ Sbjct: 140 ANGMKLSPYDISCQVQNFTGTRRSQGLLAGSTVYFDRRIIEKHFPVLRKYLSHKNVDVTS 199 Query: 137 LKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAY 173 L E A+R+ P++++ K H+AMDDI +S+ Y Sbjct: 200 LLETAKRFHPDLIENKPKPTMVHRAMDDILDSLTLYKY 237 >UniRef50_C7J1M8 Os04g0303950 protein (Fragment) n=4 Tax=Oryza sativa RepID=C7J1M8_ORYSJ Length = 69 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYRE 176 KYMP L A F + +DVS++ L RW P E K+ H+AMDDIRES+ EL YY+E Sbjct: 1 KYMPHLAAIFSHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKE 60 Query: 177 HFIK 180 + K Sbjct: 61 NIFK 64 >UniRef50_Q6XM84 FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a RepID=Q6XM84_9PHYC Length = 238 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/225 (21%), Positives = 92/225 (40%), Gaps = 57/225 (25%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR- 64 N WID+E + LD + ++E+A +VTD +LN+ + H + + +W + Sbjct: 10 NPWFWIDMETSSLDFSQSEVLEVALVVTDHHLNVWDSLHLVIHHPINILMLKSSNWCKQR 69 Query: 65 ----THTASGLVERVKASTMGDREAELATLEFLKQWV----------------------- 97 + +GL + S +A L+F + + Sbjct: 70 FCSLKYGGNGLFDECHYSETSIADATHKMLQFFEYYCTHDIGTGSRRPPPSERSFFDRTR 129 Query: 98 ------------------------PAG----KSPICGNSIGQDRRFLFKYMPELEAYFHY 129 P G ++ + G+++ DRR + + P L+ Y + Sbjct: 130 GTNGVLLSPLRCTHRDIPKQCTTTPGGSKKKQALLTGSTVYFDRRIIETHFPLLQKYLSH 189 Query: 130 RYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAY 173 + +DV+T+ E A+R++P+++ K H+AMDDI +S+A Y Sbjct: 190 KNIDVTTMLETAKRFRPDLMQYKPKPLMKHRAMDDIMDSLALYRY 234 >UniRef50_Q5KRE9 Probable oligoribonuclease n=2 Tax=Corynebacterium glutamicum RepID=Q5KRE9_CORGL Length = 219 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 I +DLE TGLD I+E+ ++ D +L +A + +++ + H Sbjct: 7 FIGLDLETTGLDAHSGVILEVGIIIFDDDLMPIAARSWLTNELVEKESIVSAPVVEVMHE 66 Query: 68 ASGLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 SGL E +K T R+ E ++ + A K P+ G+S+ DR +L +MP+L Sbjct: 67 ESGLWEDLKTGHTQPLRQVEAEASAWILE-AGANKLPMLGSSVTFDRTWLDHHMPQLHRM 125 Query: 127 FHYRYLDVSTL 137 FHYR +D +++ Sbjct: 126 FHYRSVDATSV 136 >UniRef50_Q3SMK3 Exonuclease n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMK3_THIDA Length = 233 Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 19/146 (13%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +E + +D+E +GLDP RDR+I I + L + I + Q + + N+ Sbjct: 38 DEGRCVVVDVETSGLDPRRDRLIAIGAVAVSRGKVQLGDSLEIVLQQD----TVSEKGNI 93 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H G +R +A LA LE+L GK P+ + D + + M Sbjct: 94 LIHGIGGTAQRAGVPPA---DALLAFLEYL------GKDPLVAFHVAFDAPMIRRAMKAF 144 Query: 124 ------EAYFHYRYLDVSTLKELARR 143 A+ Y+ + LARR Sbjct: 145 LGLDFSHAWADLAYVAPALYPRLARR 170 >UniRef50_B7GTG1 Putative uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GTG1_BIFLI Length = 189 Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 28/189 (14%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVT--DANLNILAEGPTI--AVHQSDEQLA 56 M+ L+W+D+E TG DP D ++EI T DA I V +D A Sbjct: 1 MTRKTEALLWVDIETTGTDPRHDLMLEIGLRCTSMDAKTEYARYESVIKPGVLPTDRSFA 60 Query: 57 LMDDWNVRTHTASGLVERVKAST---MGDREAELATLEFLKQWV------PAGKSPICGN 107 + R H +GL++ V ++ LA ++F + PAG N Sbjct: 61 ----YAHRMHEENGLIDEVIDASPELCSTARVALAVIDFTQSMAETHVLHPAGT-----N 111 Query: 108 SIGQDRRFLFKYMPELEAY--FH----YRYLDVSTLKELARRWKPEILDGFTKQGTHQAM 161 +G D FL Y+ + + FH YR LD++ ++ + + +T+ +H+ Sbjct: 112 MMGFDLPFLEHYLFTEDQWGRFHRLLSYRALDMTAIRLTQTALGADPYEHYTQTKSHRVT 171 Query: 162 DDIRESVAE 170 D + ++E Sbjct: 172 DCLDMDISE 180 >UniRef50_C8SCL6 DNA polymerase III, epsilon subunit n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SCL6_FERPL Length = 200 Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E +D+E TGL+ ++D II IA + D G I ++ ++ + + Sbjct: 3 EEKFAVVDVETTGLNVKKDEIISIAIIPMD--------GLKILFSEAYYRILKPRRFKID 54 Query: 65 THTASGLVERV--KASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 + G+ R+ +A T + + E+ LE L + + I G SI D FL K E Sbjct: 55 SVKYHGITPRMVEEAPTFCEVKEEI--LEKLNERI------IVGYSINLDIEFLKKSFKE 106 Query: 123 LEAYFHYRYLDVSTLKELARR 143 E F +Y+D++ +++L R Sbjct: 107 CEVVFECKYVDIADVEKLVGR 127 >UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 Tax=Haliangium ochraceum DSM 14365 RepID=D0LN23_HALO1 Length = 180 Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 15/111 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L++ID E TGLDPER I+EIA + + L E + + E+L +D + Sbjct: 4 LVFIDCETTGLDPERHEILEIAAIRV--HPQTLDEERELVLRVRPERL---EDADPEALE 58 Query: 68 ASGLVER--VKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL 116 +G R A ++GD AELA + L+ V + G+++ DRRFL Sbjct: 59 VNGYRRRAWADAVSLGDAMAELAPM--LEGAV------LAGHNVAFDRRFL 101 >UniRef50_B3DTZ9 Oligoribonuclease n=2 Tax=Bifidobacterium RepID=B3DTZ9_BIFLD Length = 214 Score = 38.9 bits (89), Expect = 0.081, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 23/188 (12%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSD-----EQLAL 57 A + L+WID E TGLDP + ++E+ VTD + VH + + Sbjct: 21 AKPHMLLWIDTETTGLDPNQCELLEVGMQVTDLKAETRGGSLHLIVHPDNVRNWANHPEM 80 Query: 58 MDDWNVRTHTASGL-VERVKASTMG--DREAELATLEFLKQWVPAGKSPICGNSIGQDRR 114 + + + H A+GL + +A G + L EFL + G ++ D R Sbjct: 81 LKAYEM--HLANGLMLACAEAPKTGYDYKHTALNIHEFLNDQLSQYTLHPAGTNVDFDLR 138 Query: 115 FLFKYMPE-----LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ---GTHQAMDDIRE 166 L ++ + H+R LD+++ R + + G Q GTH+ D IR Sbjct: 139 QLDVHLSRHLEHPITQGLHHRKLDLTSF-----RLADQAIGGNPYQNHAGTHRVQDCIRR 193 Query: 167 SVAELAYY 174 + + Y Sbjct: 194 DINDYTAY 201 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Eutele... 288 6e-77 UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=... 288 7e-77 UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms Re... 287 1e-76 UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD3... 283 1e-75 UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms Rep... 283 2e-75 UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms Re... 282 3e-75 UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=... 282 3e-75 UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenel... 282 3e-75 UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria R... 278 7e-74 UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_B... 270 2e-71 UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=... 266 2e-70 UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila Re... 265 6e-70 UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacteri... 262 3e-69 UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_... 261 7e-69 UniRef50_A9F5N7 Oligoribonuclease n=2 Tax=Myxococcales RepID=A9F... 260 1e-68 UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 ... 260 1e-68 UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER 260 2e-68 UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8 258 9e-68 UniRef50_C5DNN6 KLTH0G18590p n=2 Tax=Saccharomycetaceae RepID=C5... 256 2e-67 UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria R... 255 5e-67 UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID... 255 6e-67 UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_X... 254 9e-67 UniRef50_O94626 Probable oligoribonuclease n=1 Tax=Schizosacchar... 253 2e-66 UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces ja... 253 2e-66 UniRef50_Q17819 Probable oligoribonuclease n=3 Tax=Caenorhabditi... 253 3e-66 UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturatio... 252 4e-66 UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta R... 251 6e-66 UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nucl... 251 8e-66 UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavisp... 250 1e-65 UniRef50_C7YHK7 Predicted protein n=5 Tax=Sordariomycetes RepID=... 249 3e-65 UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA 249 4e-65 UniRef50_Q6BKE6 DEHA2F22594p n=4 Tax=Saccharomycetales RepID=Q6B... 248 6e-65 UniRef50_Q22ZB0 Exonuclease family protein n=2 Tax=Oligohymenoph... 246 4e-64 UniRef50_P54964 Oligoribonuclease, mitochondrial n=8 Tax=Sacchar... 245 8e-64 UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=... 243 2e-63 UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms Re... 241 6e-63 UniRef50_Q8G3N5 Oligoribonuclease n=10 Tax=Bifidobacteriaceae Re... 241 8e-63 UniRef50_C5KG86 Oligoribonuclease, putative n=2 Tax=Perkinsus ma... 241 1e-62 UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 ... 240 2e-62 UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribon... 239 3e-62 UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pedic... 238 6e-62 UniRef50_A1A0K1 Oligoribonuclease n=8 Tax=Bifidobacterium RepID=... 236 2e-61 UniRef50_Q1CWF9 Oligoribonuclease n=1 Tax=Myxococcus xanthus DK ... 236 2e-61 UniRef50_C4YJB7 Oligoribonuclease, mitochondrial n=3 Tax=Sacchar... 236 3e-61 UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei Re... 234 8e-61 UniRef50_Q4P645 Putative uncharacterized protein n=3 Tax=Ustilag... 233 2e-60 UniRef50_C7LYK0 Exonuclease RNase T and DNA polymerase III n=1 T... 232 4e-60 UniRef50_A7BDJ9 Putative uncharacterized protein n=1 Tax=Actinom... 229 4e-59 UniRef50_A5E684 Oligoribonuclease, mitochondrial n=1 Tax=Loddero... 226 2e-58 UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorp... 224 1e-57 UniRef50_C9SMP6 Oligoribonuclease n=1 Tax=Verticillium albo-atru... 224 1e-57 UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes... 224 1e-57 UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus... 222 6e-57 UniRef50_A0BKH9 Chromosome undetermined scaffold_112, whole geno... 219 4e-56 UniRef50_B6HCA9 Pc18g01380 protein n=1 Tax=Penicillium chrysogen... 216 2e-55 UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (B... 214 9e-55 UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycot... 213 2e-54 UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7... 207 1e-52 UniRef50_Q2HAN9 Putative uncharacterized protein n=1 Tax=Chaetom... 206 3e-52 UniRef50_Q6MNB4 Oligoribonuclease n=1 Tax=Bdellovibrio bacteriov... 205 5e-52 UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae... 200 1e-50 UniRef50_A3D8L9 Exonuclease, RNase T and DNA polymerase III n=4 ... 195 4e-49 UniRef50_Q8QNE0 EsV-1-139 n=1 Tax=Ectocarpus siliculosus virus 1... 195 5e-49 UniRef50_A4V739 Plant-inducible oligoribonuclease n=2 Tax=Pseudo... 193 2e-48 UniRef50_B8HIN1 Putative oligoribonuclease n=1 Tax=Arthrobacter ... 193 2e-48 UniRef50_A6DMP4 Oligoribonuclease n=1 Tax=Lentisphaera araneosa ... 189 3e-47 UniRef50_Q0UIM9 Putative uncharacterized protein n=1 Tax=Phaeosp... 188 7e-47 UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun seq... 177 2e-43 UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1 ... 175 5e-43 UniRef50_B5LWG6 Putative oligoribonuclease n=1 Tax=Feldmannia sp... 172 3e-42 UniRef50_Q6XM84 FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus ... 169 5e-41 UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae... 150 2e-35 UniRef50_C7TNW1 Putative uncharacterized protein (Fragment) n=1 ... 140 2e-32 UniRef50_Q5KRE9 Probable oligoribonuclease n=2 Tax=Corynebacteri... 127 2e-28 UniRef50_A5B9I7 Putative uncharacterized protein n=1 Tax=Vitis v... 101 9e-21 UniRef50_UPI00005A0A92 PREDICTED: similar to small fragment nucl... 98 1e-19 UniRef50_C7J1M8 Os04g0303950 protein (Fragment) n=4 Tax=Oryza sa... 92 5e-18 Sequences not found previously or not previously below threshold: UniRef50_B3DTZ9 Oligoribonuclease n=2 Tax=Bifidobacterium RepID=... 81 2e-14 UniRef50_B7GTG1 Putative uncharacterized protein n=2 Tax=Bifidob... 80 3e-14 UniRef50_B6XUS8 Putative uncharacterized protein n=2 Tax=Bifidob... 71 2e-11 UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 T... 67 3e-10 UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogac... 61 2e-08 UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlam... 60 3e-08 UniRef50_C7G8J4 Putative DNA polymerase III, alpha chain n=1 Tax... 59 1e-07 UniRef50_B1I276 DNA polymerase III, epsilon subunit n=3 Tax=Bact... 57 3e-07 UniRef50_A5UUI5 DNA polymerase III, epsilon subunit n=6 Tax=Chlo... 55 8e-07 UniRef50_C2BET5 3'-5' exonuclease and CRISPR-associated Cas2 fam... 55 8e-07 UniRef50_A5D2F3 Putative uncharacterized protein n=1 Tax=Pelotom... 55 1e-06 UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamyd... 55 1e-06 UniRef50_C0FUI4 Putative uncharacterized protein n=1 Tax=Rosebur... 54 2e-06 UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales... 54 2e-06 UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas ... 54 3e-06 UniRef50_C4ZI99 DNA polymerase III, epsilon subunit n=1 Tax=Euba... 53 4e-06 UniRef50_B0P1Y1 Putative uncharacterized protein n=2 Tax=Clostri... 52 6e-06 UniRef50_A6LV05 Exonuclease, RNase T and DNA polymerase III n=6 ... 52 8e-06 UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC21... 52 1e-05 UniRef50_C8WA42 DNA polymerase III, epsilon subunit n=1 Tax=Atop... 51 2e-05 UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepI... 51 2e-05 UniRef50_B7V8D9 Probable nuclease n=6 Tax=Pseudomonas aeruginosa... 50 2e-05 UniRef50_Q3K0L7 Exonuclease, DNA polymerase III, epsilon subunit... 50 3e-05 UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinel... 50 3e-05 UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group... 50 3e-05 UniRef50_B1VHF1 Putative exonuclease n=1 Tax=Corynebacterium ure... 50 3e-05 UniRef50_C8SCL6 DNA polymerase III, epsilon subunit n=1 Tax=Ferr... 50 3e-05 UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae... 50 4e-05 UniRef50_D2RB05 CRISPR-associated endoribonuclease Cas2 n=2 Tax=... 50 4e-05 UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cell... 49 5e-05 UniRef50_D0WQJ6 Exonuclease, DNA polymerase III, epsilon subunit... 49 5e-05 UniRef50_A9KR66 DNA polymerase III, epsilon subunit n=1 Tax=Clos... 49 6e-05 UniRef50_A6GP03 Exonuclease n=1 Tax=Limnobacter sp. MED105 RepID... 49 6e-05 UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteo... 49 6e-05 UniRef50_C8WX41 Exonuclease RNase T and DNA polymerase III n=3 T... 49 7e-05 UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate divisio... 49 8e-05 UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Para... 49 8e-05 UniRef50_Q3AAH9 Putative DNA polymerase III, epsilon subunit n=1... 49 9e-05 UniRef50_A7HNS3 DNA polymerase III, alpha subunit n=2 Tax=Thermo... 49 9e-05 UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG en... 49 9e-05 UniRef50_C4Z427 DNA polymerase n=2 Tax=Bacteria RepID=C4Z427_EUBE2 49 9e-05 UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natr... 48 1e-04 UniRef50_C0ECE2 Putative uncharacterized protein n=1 Tax=Clostri... 48 1e-04 UniRef50_Q2RJC1 DNA polymerase III, epsilon subunit n=1 Tax=Moor... 48 1e-04 UniRef50_B0MME8 Putative uncharacterized protein n=3 Tax=Clostri... 48 2e-04 UniRef50_A9BIM3 DNA polymerase III, alpha subunit n=1 Tax=Petrot... 48 2e-04 UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xa... 48 2e-04 UniRef50_A9VVI2 Exonuclease RNase T and DNA polymerase III n=1 T... 48 2e-04 UniRef50_Q89MS5 Blr4117 protein n=1 Tax=Bradyrhizobium japonicum... 48 2e-04 UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Dein... 48 2e-04 UniRef50_B6FWT9 Putative uncharacterized protein n=1 Tax=Clostri... 48 2e-04 UniRef50_O67074 DNA polymerase III subunit epsilon n=3 Tax=Aquif... 47 2e-04 UniRef50_Q482N7 DNA polymerase III, epsilon subunit n=1 Tax=Colw... 47 2e-04 UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacter... 47 2e-04 UniRef50_Q0FXM2 Exonuclease, DNA polymerase III, epsilon subunit... 47 3e-04 UniRef50_C9RRP7 DNA polymerase III, epsilon subunit n=1 Tax=Fibr... 47 3e-04 UniRef50_C1AA06 Exonuclease n=1 Tax=Gemmatimonas aurantiaca T-27... 47 3e-04 UniRef50_A8ES54 DNA polymerase III, epsilon subunit n=4 Tax=Epsi... 47 3e-04 UniRef50_UPI000185C08E DNA polymerase III epsilon subunit n=1 Ta... 47 3e-04 UniRef50_B9KXZ3 Exonuclease family n=2 Tax=Thermomicrobia (class... 47 4e-04 UniRef50_C1CX37 Putative DNA-directed DNA polymerase (DNA polyme... 47 4e-04 UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 2313... 46 4e-04 UniRef50_UPI000185C525 DNA polymerase III, epsilon subunit n=1 T... 46 5e-04 UniRef50_B4WXR6 Exonuclease superfamily n=1 Tax=Alcanivorax sp. ... 46 5e-04 UniRef50_A9F4T5 DNA polymerase III, epsilon subunit n=1 Tax=Sora... 46 5e-04 UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus cap... 46 6e-04 UniRef50_Q03C57 3'-5' exonuclease and CRISPR-associated protein ... 46 6e-04 UniRef50_C2D7T6 3'-5' exonuclease and CRISPR-associated Cas2 fam... 46 6e-04 UniRef50_A6P0N2 Putative uncharacterized protein n=1 Tax=Bactero... 46 6e-04 UniRef50_P96171 DNA for Na+/glucose symporter, n=1 Tax=Vibrio pa... 46 6e-04 UniRef50_A1VJH5 Exonuclease, RNase T and DNA polymerase III n=8 ... 46 6e-04 UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha ... 46 7e-04 UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter... 45 7e-04 UniRef50_Q9ZX22 Gp57 n=2 Tax=unclassified Siphoviridae RepID=Q9Z... 45 7e-04 UniRef50_Q0RM97 Putative DNA-directed DNA polymerase n=1 Tax=Fra... 45 8e-04 UniRef50_A7HHL1 Exonuclease RNase T and DNA polymerase III n=1 T... 45 8e-04 UniRef50_B0UN90 Exonuclease RNase T and DNA polymerase III n=3 T... 45 0.001 UniRef50_C2CW51 DNA polymerase III n=2 Tax=Bacteria RepID=C2CW51... 45 0.001 UniRef50_C0EF57 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.001 UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium... 45 0.001 UniRef50_Q7NC15 PolC n=1 Tax=Mycoplasma gallisepticum RepID=Q7NC... 45 0.001 UniRef50_D2RJV7 DNA polymerase III, epsilon subunit n=1 Tax=Acid... 45 0.001 UniRef50_C5B5Z3 Protein with DNA-directed DNA polymerase-like do... 45 0.001 UniRef50_B4AHF2 DNA polymerase III PolC-type (PolIII) n=1 Tax=Ba... 44 0.002 UniRef50_C7IIY1 DNA polymerase III, epsilon subunit n=1 Tax=Clos... 44 0.002 UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL... 44 0.002 UniRef50_C8RRD8 Exonuclease n=2 Tax=Corynebacterium jeikeium Rep... 44 0.002 UniRef50_UPI0000D530A7 DNA polymerase III subunit epsilon n=1 Ta... 44 0.002 UniRef50_B4S7Q3 Exonuclease RNase T and DNA polymerase III n=1 T... 44 0.002 UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammapr... 44 0.002 UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW 44 0.002 UniRef50_A5APD5 Putative uncharacterized protein n=1 Tax=Vitis v... 44 0.003 UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2... 44 0.003 UniRef50_Q3SMK3 Exonuclease n=1 Tax=Thiobacillus denitrificans A... 44 0.003 UniRef50_C2BLZ4 DNA polymerase III subunit epsilon n=6 Tax=Coryn... 44 0.003 UniRef50_A9FIM8 Exonuclease n=1 Tax=Sorangium cellulosum 'So ce ... 44 0.003 UniRef50_C0DA77 Putative uncharacterized protein n=4 Tax=Clostri... 44 0.003 UniRef50_B8EEZ7 DNA polymerase III, epsilon subunit n=2 Tax=Shew... 44 0.003 UniRef50_Q07NS2 Exodeoxyribonuclease I subunit C n=5 Tax=Alphapr... 44 0.003 UniRef50_UPI0001693F5B Exonuclease RNase T and DNA polymerase II... 43 0.004 UniRef50_C1DWW1 DNA polymerase III PolC-type (PolIII) n=4 Tax=Hy... 43 0.004 UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae ... 43 0.004 UniRef50_B8FZZ1 DnaQ family exonuclease/DinG family helicase n=2... 43 0.004 UniRef50_B1GYV2 DNA polymerase III epsilon subunit n=1 Tax=uncul... 43 0.004 UniRef50_Q049V0 DNA polymerase III, alpha subunit (Gram-positive... 43 0.004 UniRef50_B3DQ35 DNA polymerase III alpha subunit n=6 Tax=Bifidob... 43 0.005 UniRef50_Q96IC2 Putative RNA exonuclease NEF-sp n=26 Tax=Eutheri... 43 0.005 UniRef50_Q1QDN3 Exonuclease n=3 Tax=Psychrobacter RepID=Q1QDN3_P... 43 0.005 UniRef50_Q315G7 DNA polymerase III, epsilon subunit n=1 Tax=Desu... 43 0.005 UniRef50_Q1QZ77 Exonuclease n=1 Tax=Chromohalobacter salexigens ... 43 0.005 UniRef50_Q2W5J8 DNA polymerase III epsilon subunit and related 3... 43 0.006 UniRef50_B5ZV55 DNA polymerase III, epsilon subunit n=23 Tax=Alp... 43 0.006 UniRef50_C5BKW5 Putative exonuclease n=1 Tax=Teredinibacter turn... 42 0.006 UniRef50_C5EVY5 DNA polymerase III subunit epsilon n=2 Tax=Clost... 42 0.007 UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacte... 42 0.007 UniRef50_A2BVT4 Possible DNA polymerase III, epsilon subunit n=8... 42 0.007 UniRef50_D1VSB7 DNA polymerase III, alpha subunit, Gram-positive... 42 0.007 UniRef50_B4W5N5 DNA polymerase III, epsilon subunit n=2 Tax=Caul... 42 0.007 UniRef50_A7A526 Putative uncharacterized protein n=1 Tax=Bifidob... 42 0.008 UniRef50_B7CAB9 Putative uncharacterized protein n=1 Tax=Eubacte... 42 0.008 UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacte... 42 0.008 UniRef50_Q31GK8 Exonuclease n=8 Tax=Bacteria RepID=Q31GK8_THICR 42 0.008 UniRef50_A7B5W2 Putative uncharacterized protein n=1 Tax=Ruminoc... 42 0.009 UniRef50_C0QPN1 DNA polymerase III subunit epsilon n=1 Tax=Perse... 42 0.009 UniRef50_C5CIX0 DNA polymerase III, epsilon subunit n=1 Tax=Kosm... 42 0.009 UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter... 42 0.010 UniRef50_Q2NJG3 DNA polymerase III alpha subunit n=3 Tax=Candida... 42 0.010 UniRef50_Q1D091 Exonuclease n=2 Tax=Cystobacterineae RepID=Q1D09... 42 0.010 UniRef50_Q2RWQ8 Exonuclease n=1 Tax=Rhodospirillum rubrum ATCC 1... 42 0.010 UniRef50_D1NVL2 Exonuclease family protein n=1 Tax=Bifidobacteri... 42 0.011 UniRef50_C8PWB9 DNA polymerase III subunit epsilon n=1 Tax=Enhyd... 42 0.011 UniRef50_A1TZ29 DNA polymerase III, epsilon subunit n=3 Tax=Mari... 42 0.011 UniRef50_C7H779 DNA polymerase III, alpha subunit n=5 Tax=Clostr... 42 0.011 UniRef50_A0R7K3 Exonuclease, RNase T and DNA polymerase III n=1 ... 42 0.011 UniRef50_A9AEP6 DNA polymerase III, epsilon subunit n=55 Tax=Bur... 42 0.012 UniRef50_A5KMD9 Putative uncharacterized protein n=5 Tax=Clostri... 42 0.012 UniRef50_C6XW17 Exonuclease RNase T and DNA polymerase III n=74 ... 42 0.013 UniRef50_C9LHX7 Exonuclease n=1 Tax=Prevotella tannerae ATCC 512... 42 0.013 UniRef50_B8FYI4 DNA polymerase III, alpha subunit n=10 Tax=Clost... 42 0.013 UniRef50_Q1DB51 Exonuclease n=3 Tax=Cystobacterineae RepID=Q1DB5... 42 0.013 UniRef50_C7GFC6 DNA polymerase III, alpha chain n=1 Tax=Roseburi... 42 0.013 UniRef50_A1S5S6 DNA polymerase III epsilon subunit-related 3'-5'... 42 0.013 UniRef50_C0W5G3 Possible DNA polymerase III subunit epsilon (Fra... 42 0.013 UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus ... 42 0.014 UniRef50_A6DK72 DNA polymerase III n=1 Tax=Lentisphaera araneosa... 41 0.016 UniRef50_B8GAH5 DNA polymerase III, epsilon subunit n=1 Tax=Chlo... 41 0.016 UniRef50_D0I9Y6 DNA polymerase III epsilon subunit n=1 Tax=Grimo... 41 0.017 UniRef50_Q895Z5 DNA polymerase III alpha subunit n=1 Tax=Clostri... 41 0.018 UniRef50_B2Q2X9 Putative uncharacterized protein n=1 Tax=Provide... 41 0.019 UniRef50_B7A7U0 Putative PAS/PAC sensor protein n=1 Tax=Thermus ... 41 0.019 UniRef50_C8NBG4 1-phosphofructokinase n=1 Tax=Cardiobacterium ho... 41 0.019 UniRef50_A8V2X6 DNA polymerase III, alpha subunit n=1 Tax=Hydrog... 41 0.020 UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitroso... 41 0.020 UniRef50_D0XIW2 DNA polymerase III, epsilon subunit n=1 Tax=Brev... 41 0.020 UniRef50_B5YGV6 DNA polymerase III alpha subunit n=1 Tax=Thermod... 41 0.022 UniRef50_C7G6P2 DNA polymerase III PolC-type n=1 Tax=Roseburia i... 41 0.022 UniRef50_C1SK59 Exonuclease, DNA polymerase III, epsilon subunit... 41 0.022 UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma... 41 0.022 UniRef50_A8UVH7 Putative uncharacterized protein n=1 Tax=Hydroge... 41 0.023 UniRef50_A6D4K1 DNA polymerase III subunit epsilon n=1 Tax=Vibri... 40 0.023 UniRef50_C6LDW1 Helicase, RecD/TraA family n=4 Tax=Clostridia Re... 40 0.025 UniRef50_A4HVE4 Mitochondrial DNA polymerase I protein B, putati... 40 0.026 UniRef50_A6VF58 Exonuclease RNase T and DNA polymerase III n=2 T... 40 0.026 UniRef50_A2CAY4 Possible DNA polymerase III, epsilon subunit n=1... 40 0.026 UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3X... 40 0.029 UniRef50_A4CKG8 DNA polymerase III, epsilon subunit n=1 Tax=Robi... 40 0.031 UniRef50_C6SPJ4 DNA polymerase III alpha subunit n=1 Tax=Strepto... 40 0.032 UniRef50_Q084B5 Exonuclease, RNase T and DNA polymerase III n=8 ... 40 0.032 UniRef50_Q3B459 DNA polymerase III, epsilon subunit n=8 Tax=Chlo... 40 0.033 UniRef50_Q38W73 DNA polymerase III polC-type n=246 Tax=Bacilli R... 40 0.034 UniRef50_B3RU88 Putative uncharacterized protein n=1 Tax=Trichop... 40 0.036 UniRef50_Q0SVV0 Helicase/exonuclease n=12 Tax=Clostridium RepID=... 40 0.036 UniRef50_B9ZJP8 Exonuclease RNase T and DNA polymerase III n=1 T... 40 0.036 >UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Euteleostomi RepID=ORN_HUMAN Length = 237 Score = 288 bits (738), Expect = 6e-77, Method: Composition-based stats. Identities = 89/183 (48%), Positives = 123/183 (67%), Gaps = 4/183 (2%) Query: 1 MSANE---NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL 57 M+A E ++W+DLEMTGLD E+D+IIE+A L+TD++LNILAEGP + + Q DE L Sbjct: 33 MAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDS 92 Query: 58 MDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 M DW H SGL + VK ST+ ++AE L F++Q P G P+ GNS+ +D++FL Sbjct: 93 MSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLD 152 Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYRE 176 KYMP+ + HYR +DVST+KEL RRW PE + K +H+A+DDI ES+ EL +YR Sbjct: 153 KYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRN 212 Query: 177 HFI 179 + Sbjct: 213 NIF 215 >UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=ORN_PSEA7 Length = 180 Score = 288 bits (737), Expect = 7e-77, Method: Composition-based stats. Identities = 120/178 (67%), Positives = 142/178 (79%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 N NLIWIDLEMTGLDP+RD IIE+AT+VTD++LN LAEGP IA+HQ +E LA MD+WN Sbjct: 3 NPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVLAGMDEWNT 62 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 R H SGL +RV+ ST+ EAE TL FL+QWVP SPICGNSI QDRRFL+++MP L Sbjct: 63 RQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRL 122 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 E YFHYR LDVSTLKELA RW P++ + F K TH A+DDIRES+AEL +YR+HFIKL Sbjct: 123 EGYFHYRNLDVSTLKELAARWAPQVRESFKKGNTHLALDDIRESIAELRHYRDHFIKL 180 >UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms RepID=ORN_HAEIG Length = 182 Score = 287 bits (735), Expect = 1e-76, Method: Composition-based stats. Identities = 133/181 (73%), Positives = 156/181 (86%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS ++ NLIWIDLEMTGLDPE++RIIEIAT+VTD NLNILAEGP +AVHQSDE L M+D Sbjct: 1 MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 W +TH+ +GL+ERVKAS + +R AEL TL+FLK+WVP G SPICGNSI QD+RFL KYM Sbjct: 61 WCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P+L YFHYR+LDVSTLKELA RWKPEIL+GF K+ TH A+DDIRES+ ELAYYREHF+K Sbjct: 121 PDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMK 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD30_ANOGA Length = 228 Score = 283 bits (726), Expect = 1e-75, Method: Composition-based stats. Identities = 88/178 (49%), Positives = 120/178 (67%), Gaps = 1/178 (0%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + NL+WIDLEMTGLD E+DRI+EIA +VTD+ LNI+A+GP I +++ D LA M+ W Sbjct: 41 TSVQNLVWIDLEMTGLDVEKDRILEIACIVTDSKLNIIAKGPNIIINEPDAVLAGMNSWC 100 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 H+ SGL+E VK ST +AE L+F+K++ P K P+ GNSI DR F+ KYMP Sbjct: 101 KDHHSKSGLIEAVKKSTYSVDQAERDVLDFVKKYCPERKCPMAGNSIYMDRLFIMKYMPT 160 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREHFI 179 L Y HYR +DVST+KEL +RW + + K+ H+A+DDI ES+ E+ YY+ F Sbjct: 161 LNEYLHYRVIDVSTVKELCKRWNQNVYNSSPPKKLAHRALDDIEESINEMKYYKSMFF 218 >UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms RepID=A3JF32_9ALTE Length = 180 Score = 283 bits (724), Expect = 2e-75, Method: Composition-based stats. Identities = 115/179 (64%), Positives = 143/179 (79%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A N L+WIDLEMTGLDPE++RIIE+ATL+TD+ LN++AEGP +AVHQSD + MD+W Sbjct: 2 AKGNRLVWIDLEMTGLDPEQERIIEMATLITDSELNLIAEGPVLAVHQSDTLMGAMDEWC 61 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 RTH SGL +RV S + + EAE TL FL++ + G SP+CGNSIGQDRRFL KYMP+ Sbjct: 62 TRTHGESGLTQRVTDSRISEAEAEQQTLAFLREHLEPGDSPLCGNSIGQDRRFLVKYMPQ 121 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 LE +FHYR LDVST+KELARRW+P++LDG KQG H A+DDIR+S+ EL +YREHF KL Sbjct: 122 LEEFFHYRNLDVSTIKELARRWRPDVLDGVKKQGNHLALDDIRDSINELRHYREHFFKL 180 >UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms RepID=ORN_COLP3 Length = 181 Score = 282 bits (723), Expect = 3e-75, Method: Composition-based stats. Identities = 103/181 (56%), Positives = 136/181 (75%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ N++NLIW+DLEMTGL+P D I+EIA ++TD+ LNILA+GP A+ Q+D+ L M+ Sbjct: 1 MAGNDSNLIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNP 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 W + H SGL +R + S + A +L F+++WVP GKSP+CGNSIGQDRRF+ KYM Sbjct: 61 WCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P+ E +FHYR LDVST+KELA+RWKPE+L+ K G H A+DDI+ES+AEL YRE F K Sbjct: 121 PDFEDHFHYRNLDVSTIKELAKRWKPEVLESVVKTGAHLALDDIKESIAELKVYRELFFK 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=ORN_AZOSE Length = 183 Score = 282 bits (723), Expect = 3e-75, Method: Composition-based stats. Identities = 110/181 (60%), Positives = 143/181 (79%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ ++N+LIW+D+EMTGL P+ DRIIEIA ++TD+ LN +AE P IAVHQ D L MD+ Sbjct: 1 MAQDQNHLIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVLDAMDE 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN TH SGL +RVKAS +G+ +AE L FL+Q VPA SP+CGNSI QDRRF+ +YM Sbjct: 61 WNRNTHGKSGLTDRVKASLIGEADAEAQMLAFLQQHVPAHTSPMCGNSICQDRRFMARYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P LEA+FHYR LDVSTLKELA+RW+PE+ G K+G H+A+ DIRES+AEL +YR++F++ Sbjct: 121 PHLEAWFHYRNLDVSTLKELAKRWRPEVYKGVEKKGKHEALADIRESIAELRHYRDNFLR 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DYM7_EIKCO Length = 238 Score = 282 bits (723), Expect = 3e-75, Method: Composition-based stats. Identities = 103/179 (57%), Positives = 136/179 (75%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 N NL W+D+EMTGL+PE DRIIE A ++TDA+LNILA+ + A+HQSDE L MD WN Sbjct: 49 PNPLNLCWLDMEMTGLNPEHDRIIEAAVVITDADLNILAQSESYAIHQSDELLEGMDAWN 108 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 TH +GL +RVK ST+ + E E L+F+ QW+P G SP+CGN++ QDRRF+ +YMP+ Sbjct: 109 TSTHERTGLTQRVKDSTLSEAEVEQRLLDFIAQWIPQGTSPLCGNTVHQDRRFMQRYMPK 168 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 LEA+FHYR LDVSTLKELARRW P F+K+G+H+A+DDI ES+ E +YR+ F++L Sbjct: 169 LEAWFHYRNLDVSTLKELARRWHPAAYKSFSKKGSHRALDDILESIEEFRHYRQTFLRL 227 >UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria RepID=ORN_THICR Length = 184 Score = 278 bits (711), Expect = 7e-74, Method: Composition-based stats. Identities = 106/176 (60%), Positives = 131/176 (74%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +ENNLIWIDLEMTGLD + D+IIEIAT+VTDA LN+LAEGP +A+ L MD W Sbjct: 3 SENNLIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAWCT 62 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +RV+ ST+ +AE T++FLK +VP GKSP+CGNSI QDRRFL + MPEL Sbjct: 63 THHGNSGLTKRVQESTITMAQAEQETIKFLKPYVPKGKSPMCGNSICQDRRFLIEQMPEL 122 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 E +FHYR LDVS+LKELARRW P + G+ K+G H A+DDI ES+ EL YYR++ Sbjct: 123 EQFFHYRNLDVSSLKELARRWAPTVYSGYKKKGAHLALDDIYESIEELKYYRQNLF 178 >UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_BURXL Length = 207 Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats. Identities = 105/179 (58%), Positives = 137/179 (76%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 + ++ NL+W+D+EMTGL+P+ DRIIEIA +VT++ L+ + EGP +A+HQSDE LA MD Sbjct: 13 LVRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLAGMDQ 72 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN TH SGL++RVKAST+ + +A +FL +VP GKSP+CGNSI QDRRF+ ++M Sbjct: 73 WNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNSICQDRRFMARWM 132 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 PELE +FHYR LDVSTLKEL RRW+P I GF K+ H A+ DI ES+ EL YYREHF+ Sbjct: 133 PELERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESIDELKYYREHFL 191 >UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=Q0RPW6_FRAAA Length = 256 Score = 266 bits (681), Expect = 2e-70, Method: Composition-based stats. Identities = 81/176 (46%), Positives = 112/176 (63%), Gaps = 2/176 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + L+WID EMTGLD D ++E+A LVTD+ LNIL EG + + DE L M Sbjct: 16 DRLVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIDLVISAPDEALEAMVPVVREM 75 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELE 124 H +SGL V+AST+ +A+ L++++ VP K+P+CGNSI DR FL +YMP L+ Sbjct: 76 HQSSGLTAAVRASTLTLADAQAQVLDYVRARVPEVRKAPLCGNSIATDRTFLARYMPALD 135 Query: 125 AYFHYRYLDVSTLKELARRWKPE-ILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 A+ HYR +DVS++KELARRW K+G H+A+ DI+ES+ EL YYR+ Sbjct: 136 AHLHYRMIDVSSIKELARRWYVRTYYAAPVKRGGHRALADIQESIEELRYYRQALF 191 >UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila RepID=ORN_DROME Length = 211 Score = 265 bits (678), Expect = 6e-70, Method: Composition-based stats. Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +++W+DLEMTGLD E+D+I+E+A ++TD +LN+ +EGP A++ E M++W ++ Sbjct: 35 DTDIVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMK 94 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL++R K+S + EA L +L++ +P P+ GNS+ DR F+ K+MP ++ Sbjct: 95 HHYNSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVD 154 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFIK 180 AY HYR +DVST+KELA+RW P ILD K+ TH+++DDIRES+ ELAYY+ + K Sbjct: 155 AYLHYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIKELAYYKANLFK 211 >UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJX7_CORK4 Length = 222 Score = 262 bits (671), Expect = 3e-69, Method: Composition-based stats. Identities = 83/176 (47%), Positives = 121/176 (68%), Gaps = 2/176 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + ++WID EMTGLDP ++EIA +VTDANLNIL EG I +H +D++LA MDD+ + Sbjct: 23 DRIVWIDCEMTGLDPSTHVLVEIAAIVTDANLNILDEGLDIVIHATDDELAKMDDFVTQM 82 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWV-PAGKSPICGNSIGQDRRFLFKYMPELE 124 HT +GL + ++ ST+ EAE L+++K+WV +P+ GNSI DR+F+ YMP+L+ Sbjct: 83 HTKNGLTDEIRKSTVSVGEAENEVLDYVKKWVNAPRTAPLAGNSIASDRKFIAAYMPKLD 142 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFI 179 + HYR +DVS++KELA RW P++ K+G H+A+ DI+ES+ EL YYR Sbjct: 143 EFLHYRMIDVSSIKELAHRWYPKVYQNQPKKGLAHRALADIKESIRELDYYRRAVF 198 >UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_ARATH Length = 222 Score = 261 bits (668), Expect = 7e-69, Method: Composition-based stats. Identities = 83/177 (46%), Positives = 113/177 (63%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + L+WIDLEMTGL+ E DRI+EIA ++T+ +L EGP + V Q+ + L MDDW Sbjct: 43 KQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKMDDWCQT 102 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H ASGL ++V S + +REAE +EF+K+ V +G + GNS+ D FL KYMPEL Sbjct: 103 HHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLKKYMPELA 162 Query: 125 AYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 A F + +DVS++K L RW P E K+ H+AMDDIRES+ EL YY++ K Sbjct: 163 ALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYYKKTIFK 219 >UniRef50_A9F5N7 Oligoribonuclease n=2 Tax=Myxococcales RepID=A9F5N7_SORC5 Length = 187 Score = 260 bits (666), Expect = 1e-68, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 120/180 (66%), Gaps = 1/180 (0%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ ++W+DLEMTGLD I+EIAT+VT+ +L ++AEGP + +HQ + LA M D Sbjct: 1 MTDRSQRMVWVDLEMTGLDESSCAIVEIATIVTEPDLTVVAEGPCLVIHQPESVLAGMSD 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + H SGL+ER++AST+ +AE T FL+ G + +CGNS+ +DR FL +YM Sbjct: 61 FVRDLHERSGLLERIRASTLSVGDAESETRAFLEAHCDKGTAVLCGNSVWKDRAFLQRYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 PEL ++ HYR +DVSTLKEL RRW P + K+ H+A+DDIRES+ EL +YR + + Sbjct: 121 PELLSFLHYRIVDVSTLKELVRRWYP-LRAAPKKREIHRALDDIRESIEELRWYRANVFQ 179 >UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5BB5 Length = 188 Score = 260 bits (666), Expect = 1e-68, Method: Composition-based stats. Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 3/182 (1%) Query: 1 MSANE--NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALM 58 MS N+ N ++WID+EMTGL E DRI+E+A L+TD NLNI+++ +HQSD++LA M Sbjct: 1 MSNNQRRNRIVWIDMEMTGLAVESDRILEVACLITDENLNIVSDEFHQVLHQSDDELARM 60 Query: 59 DDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 ++W HT SGLVE K S +R + + FL +++P G+ P+ GNS+ DR FL K Sbjct: 61 NEWCQEHHTKSGLVEASKKSQEDERSVDKSLYNFLNKYIPKGRCPMAGNSVYMDRLFLRK 120 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREH 177 YMP Y HYR +DVS++KE+ RRWKPE+ D K+ H+++DDIRES++EL +YR++ Sbjct: 121 YMPTSNEYMHYRIIDVSSIKEVVRRWKPEVHDAAPKKERNHRSLDDIRESISELDFYRKN 180 Query: 178 FI 179 Sbjct: 181 VF 182 >UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER Length = 184 Score = 260 bits (664), Expect = 2e-68, Method: Composition-based stats. Identities = 78/177 (44%), Positives = 120/177 (67%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +++W+DLEMTGLD E+D+I+E++ ++TD +LN+ +E A++ E M+DW + Sbjct: 8 DTDIVWMDLEMTGLDIEKDKILEVSCIITDKDLNVKSEATCFAINHPQEVYDTMNDWCME 67 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGLV+R K+S + +A L +L++ VP P+ GNS+ DR F+ K MP ++ Sbjct: 68 QHYKSGLVDRCKSSDVKPEQASNLVLSYLERNVPKRACPLGGNSVYMDRLFIRKCMPLVD 127 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFIK 180 Y HYR +DVST+KEL RRW+PE+L K+ TH++MDDI ES+ EL YY+++F K Sbjct: 128 DYLHYRIVDVSTIKELVRRWRPELLSSAPKKTFTHRSMDDIMESINELNYYKKNFFK 184 >UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8 Length = 194 Score = 258 bits (659), Expect = 9e-68, Method: Composition-based stats. Identities = 101/174 (58%), Positives = 124/174 (71%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A + LIWIDLEMTGLD +RD IIEIAT+VTDA LN+LAEGP +A+ S E L MD+WN Sbjct: 6 AGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDEWN 65 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 H SGL +RV S + +AE T+ FL +W+ AG SP+CGNSI QDRRFL + M Sbjct: 66 RNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLHRQMSR 125 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYRE 176 LE YFHYR LDVST+KELARRW P + GF K H A+ D+R+S+ EL +YR+ Sbjct: 126 LERYFHYRNLDVSTIKELARRWAPAVASGFAKSSAHTALSDVRDSIDELRHYRQ 179 >UniRef50_C5DNN6 KLTH0G18590p n=2 Tax=Saccharomycetaceae RepID=C5DNN6_LACTC Length = 323 Score = 256 bits (656), Expect = 2e-67, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVR 64 ++W+D EMTGLD D IIEI ++TD +LNI+ E G +H + + M++W + Sbjct: 74 RPIVWVDCEMTGLDHVNDHIIEICCIITDGDLNIIDEAGYESVIHCDKKIMDAMNEWCID 133 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPEL 123 H +SGL ++V ST + E L +L++++P K + GNS+ DR F+ + P++ Sbjct: 134 HHGSSGLTQKVLDSTKTTGQVEEELLAYLRKYIPAERKGVLAGNSVHMDRVFMMREFPKV 193 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIK 180 + YR +DVST+ E++ R P++ F K+G H A DI ES+A+L +Y++H++K Sbjct: 194 IDHLFYRIIDVSTIMEVSFRHNPDLASVFPRKKGAHTARADILESIAQLKWYQDHYLK 251 >UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria RepID=ORN_FRAT1 Length = 178 Score = 255 bits (652), Expect = 5e-67, Method: Composition-based stats. Identities = 94/176 (53%), Positives = 127/176 (72%), Gaps = 2/176 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +NLIWIDLEMTGLD + +I EIA ++TD +LNI+AE IA++Q DE LA M++W ++T Sbjct: 5 DNLIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKT 64 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 HT +GL +RVK S + AE LEF++++VP SP+CGNSI QDRRFL KYMP ++ Sbjct: 65 HTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDE 124 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 Y HYR LDV+TLK L + W F K+ TH+A+DDIRES+AEL +YR+ + + Sbjct: 125 YCHYRMLDVTTLKLLNQYWGDG--KSFEKKNTHKALDDIRESIAELKFYRQKLLSI 178 >UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID=ORN_CORGB Length = 219 Score = 255 bits (651), Expect = 6e-67, Method: Composition-based stats. Identities = 85/181 (46%), Positives = 123/181 (67%), Gaps = 2/181 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++A ++ L+W+DLEMTGLD +R I+E+A LVTDANLN+L EG + VH ++E+LA MDD Sbjct: 12 VAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVHATEEELAQMDD 71 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWV-PAGKSPICGNSIGQDRRFLFKY 119 + H +SGL E+++ S + +EAE A L +++ PA +P+ GNSI DR F+ + Sbjct: 72 FVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNSIATDRAFIREQ 131 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHF 178 MP L+ HYR +DVS++KELARRW P + ++G H+A+ DI ES+ EL YYR F Sbjct: 132 MPRLDEALHYRMVDVSSVKELARRWYPRVYYKQPEKGLAHRALADIVESIRELDYYRRSF 191 Query: 179 I 179 Sbjct: 192 F 192 >UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_XYLFT Length = 193 Score = 254 bits (650), Expect = 9e-67, Method: Composition-based stats. Identities = 102/175 (58%), Positives = 122/175 (69%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ LIWIDLEMTGLD RD IIEIAT+VTDA LN+LAEGP A+ L MD+WN Sbjct: 10 SDRRLIWIDLEMTGLDTHRDSIIEIATVVTDAQLNVLAEGPEFAISHPLNVLEAMDEWNR 69 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +RV S + +AE +T+ FL+QWV G SP+CGNSI QDRRFL + MP L Sbjct: 70 NQHRHSGLWQRVLNSEIQHAQAEASTIAFLQQWVKIGASPMCGNSICQDRRFLHRQMPCL 129 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 E YFHYR LDVSTLKELA W P ILDG K +H A+ DI +S+AEL +YR+ Sbjct: 130 ERYFHYRNLDVSTLKELAGCWSPSILDGVVKTSSHTALSDIYDSIAELRHYRKSM 184 >UniRef50_O94626 Probable oligoribonuclease n=1 Tax=Schizosaccharomyces pombe RepID=ORN_SCHPO Length = 180 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 71/181 (39%), Positives = 115/181 (63%), Gaps = 2/181 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS + L+WID EMTGL+ + ++E+A ++TD NL + E + ++QL+ M+D Sbjct: 1 MSNLKQPLVWIDCEMTGLEVGKHVLMEVAAIITDGNLRPVEEKFDAVIKLDEKQLSEMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKY 119 W + H SGL ER + S + ++ E L ++K+++P + + I GNS+ D RFL Sbjct: 61 WCIEQHGKSGLTERCRQSNLTVKDVENQLLAYIKKYIPKKREALIAGNSVHADVRFLSVE 120 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 MP++ + HYR +DVST+KELA+RW P+I + K+G H+A+ DI ES+ EL +YR +++ Sbjct: 121 MPKIIEHLHYRIIDVSTIKELAKRWCPDI-PAYDKKGDHRALSDILESIGELQHYRSYWL 179 Query: 180 K 180 Sbjct: 180 S 180 >UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JVJ0_SCHJY Length = 187 Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats. Identities = 73/179 (40%), Positives = 116/179 (64%), Gaps = 2/179 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 +A + L+W+D EMTGL+ +D ++E+A ++TD +LN + E +H D++L M+DW Sbjct: 3 AALRSPLVWVDCEMTGLEVGKDVLMEVAAIITDGDLNPIEEKFEETIHVDDDKLRQMNDW 62 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKYM 120 + H ASGL ER + + E L ++++++P + + I GNS+ D RFL M Sbjct: 63 CIDHHGASGLTERCRQCKQSVNQVEQKLLNYIQKYIPRRREALIAGNSVHADVRFLTVEM 122 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 P++ + HYR +DVST+KEL RRW+P+I F K+ H+A+ DI ES+AEL YYR+H++ Sbjct: 123 PKVIEHLHYRIIDVSTIKELCRRWRPDI-PPFKKRLAHRALSDIEESIAELKYYRQHWL 180 >UniRef50_Q17819 Probable oligoribonuclease n=3 Tax=Caenorhabditis RepID=ORN_CAEEL Length = 193 Score = 253 bits (646), Expect = 3e-66, Method: Composition-based stats. Identities = 86/175 (49%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E +IWID EMTGLD E+ + EIA +VTD+ LN +A GP I +HQ E L M++W Sbjct: 12 EQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRN 71 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 T +GL+E++ AS +AE ++FLK GKSPI GNSI DR F+ KYMP+L+ Sbjct: 72 TFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLD 131 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 + HYR +DVST+K L +RW P+ KQ TH+A DDI ES+AEL YRE Sbjct: 132 KFAHYRCIDVSTIKGLVQRWYPDYKH-PKKQCTHRAFDDIMESIAELKNYRESIF 185 >UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturation n=5 Tax=Saccharomycetaceae RepID=C4R594_PICPG Length = 213 Score = 252 bits (645), Expect = 4e-66, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S + ++WID EMTGLD D I+EI ++TD NL ++ EG +H ++ ++ M++W Sbjct: 32 SPLQQPIVWIDCEMTGLDIYNDHIVEICCIITDQNLEVVDEGYESVIHYDNDVMSKMNEW 91 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 + H SGL ++V ST + E L ++ Q + + GNSI D+ F+++ P Sbjct: 92 CIEHHGTSGLTKKVLESTKTLPQVESELLSYISQHIEPNTGVMAGNSIHMDKFFMYREFP 151 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREHFIK 180 ++ Y YR +DVST+ E+ +R P +L K+ H A DI ES+ +L +++ H++K Sbjct: 152 KVIDYLFYRLIDVSTIYEVCKRHNPALLRTAPRKKAAHTAKADILESIQQLKWFQTHYLK 211 >UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta RepID=Q7XVQ9_ORYSJ Length = 249 Score = 251 bits (643), Expect = 6e-66, Method: Composition-based stats. Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S + L+WIDLEMTGLD +DRI+EIA ++TD L EGP + + QS E + M++W Sbjct: 65 SDYDKPLVWIDLEMTGLDITKDRILEIACIITDGKLTKRIEGPDLVIRQSKECVNDMNEW 124 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 H+ASGL E+V S + + +AE L+F+++++ + I GNS+ D FL KYMP Sbjct: 125 CKVHHSASGLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAGNSVYMDLLFLKKYMP 184 Query: 122 ELEAYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 L A F + +DVS++ L RW P E K+ H+AMDDIRES+ EL YY+E+ K Sbjct: 185 HLAAIFSHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKENIFK 244 >UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nuclease n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792A17 Length = 188 Score = 251 bits (642), Expect = 8e-66, Method: Composition-based stats. Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 1/177 (0%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 NE+N++W D EMTGLD +IE A ++TD NL +LAE P I +HQSD+ L M++W+ Sbjct: 10 NNEHNIVWFDGEMTGLDCNHHTLIEAAIIITDKNLKVLAESPNIIIHQSDKVLENMEEWS 69 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 + H SGL E V+ S + +A+ EF+K + P G P+ GNSI DR F+ KYMP+ Sbjct: 70 KKHHGISGLTENVRKSNISIEQADQMLYEFIKPFAPKGVCPLAGNSIHMDRTFIRKYMPK 129 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHF 178 LE++ YR +DVSTLKEL +RWKPE+ + K G H+A+DDI+ESV EL +Y+ + Sbjct: 130 LESHLSYRLIDVSTLKELLKRWKPELANEVPIKSGKHRALDDIKESVQELQFYKSYL 186 >UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y8A3_CLAL4 Length = 283 Score = 250 bits (640), Expect = 1e-65, Method: Composition-based stats. Identities = 65/183 (35%), Positives = 108/183 (59%), Gaps = 4/183 (2%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDD 60 +A L+WID EMTGLD +D IIEI ++TD NLNI+ E G V+ + L M++ Sbjct: 29 TALYKPLVWIDCEMTGLDIAKDHIIEICCIITDGNLNIIDEKGYESTVYVPKKVLDSMNE 88 Query: 61 WNVRTHTASGLVERVKASTM-GDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFK 118 W V H SGL +V A+ + + L++++ ++P S + GNS+ D+ F+ K Sbjct: 89 WCVNQHGKSGLTAKVLANPQQTLAKVQQELLDYIQFYIPEPRTSLLAGNSVHMDKFFMMK 148 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREH 177 P++ + HYR +DVS++ E+ R P ++ F K+G H A DI ES+ +L +Y+++ Sbjct: 149 EFPQVIDHLHYRLVDVSSIMEVGFRHNPALMKCFPRKKGNHTAKSDILESINQLKWYQDN 208 Query: 178 FIK 180 +++ Sbjct: 209 YLR 211 >UniRef50_C7YHK7 Predicted protein n=5 Tax=Sordariomycetes RepID=C7YHK7_NECH7 Length = 216 Score = 249 bits (637), Expect = 3e-65, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 108/184 (58%), Gaps = 5/184 (2%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDD 60 SA+++ L+WID EMTGLD + D I+EI ++T NL IL E G +H +L MDD Sbjct: 14 SASDDPLVWIDCEMTGLDQDNDEILEIYCIITTGNLEILDEEGFHAIIHWPQSRLDQMDD 73 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKY 119 W +TH SGL V AST EA A +++ +++P + + GNS+ DR FL + Sbjct: 74 WCTKTHADSGLTAAVLASTTTPEEAASALYDYVTRFIPDRRRGLLAGNSVHCDRAFLRRE 133 Query: 120 MP-ELEAYFHYRYLDVSTLKELARRWKPE--ILDGFTKQGTHQAMDDIRESVAELAYYRE 176 ++ + H+R LDVS++KE ARRW + + K+G H+A DDI ES+ E YYRE Sbjct: 134 PYRKVMKHLHHRILDVSSIKEAARRWCAKRIVNKVPNKKGRHKARDDILESIEEARYYRE 193 Query: 177 HFIK 180 + Sbjct: 194 VIFR 197 >UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA Length = 215 Score = 249 bits (636), Expect = 4e-65, Method: Composition-based stats. Identities = 82/174 (47%), Positives = 110/174 (63%), Gaps = 2/174 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L+WID EMTGLD D++IEIA LVTDA+LNIL +G + +H D L+ M D H+ Sbjct: 5 LVWIDCEMTGLDLGPDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVADMHS 64 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEAY 126 SGL E V+AST+ AE L+++ + V +P+ GNSI DR F+ + MP L+A+ Sbjct: 65 RSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAGNSIATDRSFIARDMPALDAF 124 Query: 127 FHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFI 179 HYR +DVS++KEL RRW P I G +G H+A+ DI ES+ EL YYR Sbjct: 125 LHYRMIDVSSIKELCRRWYPRIYFGQPPKGLAHRALADIHESIRELQYYRRTAF 178 >UniRef50_Q6BKE6 DEHA2F22594p n=4 Tax=Saccharomycetales RepID=Q6BKE6_DEBHA Length = 295 Score = 248 bits (634), Expect = 6e-65, Method: Composition-based stats. Identities = 69/177 (38%), Positives = 106/177 (59%), Gaps = 3/177 (1%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRT 65 L+WID EMTGL+ +D IIEI ++TD NL I+ E G V+Q E L M++W V Sbjct: 89 PLVWIDCEMTGLNVFQDHIIEICCIITDGNLEIIDEKGFESTVYQPKEVLDGMNEWCVNQ 148 Query: 66 HTASGLVERVKASTMG-DREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL ++ + + E LE++KQ+V K + GNSI D+ F+ + P++ Sbjct: 149 HGKSGLTAKILENPQCELSKIEDELLEYIKQYVQPNKGIMAGNSIHMDKFFMMREFPKII 208 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYREHFIK 180 Y HYR +DVS++ E+ R PE++ F K+ G H A DI ES+ +L +Y+++++K Sbjct: 209 DYLHYRLIDVSSIMEVGYRHNPELMKLFPKKQGNHTARSDILESINQLKWYKQNYLK 265 >UniRef50_Q22ZB0 Exonuclease family protein n=2 Tax=Oligohymenophorea RepID=Q22ZB0_TETTH Length = 190 Score = 246 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 3/180 (1%) Query: 5 ENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ L+W D EMTGL+ D+IIEIATL+TD L + +GP + + E L MD+W Sbjct: 11 KDPLLWCDCEMTGLNFLNNDQIIEIATLLTDGELTQVIKGPELIIQAPKELLESMDEWCT 70 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQW-VPAGKSPICGNSIGQDRRFLFKYMPE 122 TH SGL ++V S + + AE ++FLK + ++ + GNSI D +F+ K MP Sbjct: 71 NTHKGSGLYDKVLKSEVTLQMAEEQVIKFLKDNGIEQKEALLAGNSIHADMKFIQKQMPN 130 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIKL 181 L + HYR +DVST+KEL +RW PEIL K+G H+A+DDI ES+ EL +YR+ K+ Sbjct: 131 LYNFLHYRLVDVSTVKELTKRWNPEILKKAPVKKGGHRALDDILESIEELKFYRKEVFKI 190 >UniRef50_P54964 Oligoribonuclease, mitochondrial n=8 Tax=Saccharomycetaceae RepID=ORN_YEAST Length = 269 Score = 245 bits (625), Expect = 8e-64, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 101/183 (55%), Gaps = 9/183 (4%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNIL-------AEGPTIAVHQSDEQLALMD 59 L+WID EMTGLD DRIIEI ++TD +L + +H E + M+ Sbjct: 54 PLVWIDCEMTGLDHVNDRIIEICCIITDGHLAPVKAADGQGDSHYESVIHYGPEVMNKMN 113 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFK 118 +W + H SGL +V AS + E LE++++++P + GNS+ DR F+ + Sbjct: 114 EWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDKNVGVLAGNSVHMDRLFMVR 173 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYREH 177 P++ + YR +DVS++ E+ARR P + K+ H A DI+ES+A+L +Y ++ Sbjct: 174 EFPKVIDHLFYRIVDVSSIMEVARRHNPALQARNPKKEAAHTAYSDIKESIAQLQWYMDN 233 Query: 178 FIK 180 ++K Sbjct: 234 YLK 236 >UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=D1NUV9_9BIFI Length = 219 Score = 243 bits (621), Expect = 2e-63, Method: Composition-based stats. Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 3/180 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 SA ++ LIWID EMTGLD D + E++ + TD LN+L EG + S + + M+D+ Sbjct: 11 SAQQSRLIWIDCEMTGLDIFHDELCEVSVVPTDFELNVLDEGIDFVIKPSKDAVDHMNDF 70 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAG-KSPICGNSIGQDRRFLFKYM 120 HT SGL+ + M +EAELA ++++K++ P G K + GNSIG D++FL +YM Sbjct: 71 VRAMHTRSGLITEW-ETGMDVKEAELAVIDYVKKFTPEGVKPLLAGNSIGSDKKFLDRYM 129 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHFI 179 P L + HYR +DVSTLKELARRW P++ + K G H+A+ DI ES+ EL YYRE F+ Sbjct: 130 PGLMEHLHYRVVDVSTLKELARRWYPQVYMNRPAKNGGHRALADIIESLDELRYYREAFM 189 >UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms RepID=ORN_PROAC Length = 202 Score = 241 bits (617), Expect = 6e-63, Method: Composition-based stats. Identities = 79/174 (45%), Positives = 111/174 (63%), Gaps = 3/174 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L+WID EMTGLD D +IE+A LVTD LN+ EG + + + L M+D+ HT Sbjct: 2 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 61 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELEAY 126 SGL+ + +A+ L++++ +VP GK+P+ GN+IG DR FL K MP+LE+Y Sbjct: 62 TSGLLAE-LDKGLTMAQAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLAKDMPKLESY 120 Query: 127 FHYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHFI 179 HYR +DVS++KELARRW P KQG H+A+ DI+ES+ EL Y+RE + Sbjct: 121 VHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWREVLM 174 >UniRef50_Q8G3N5 Oligoribonuclease n=10 Tax=Bifidobacteriaceae RepID=ORN_BIFLO Length = 216 Score = 241 bits (616), Expect = 8e-63, Method: Composition-based stats. Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 4/181 (2%) Query: 2 SANENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 SA ++ LIWID EMTGLD D ++E++ + TD +LN+L EG + S++ + M+D Sbjct: 11 SAKDSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSEKAVNHMND 70 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKY 119 + + HT SGL+ + + EAE E++ ++ P G P+ GN+IG D++FL Y Sbjct: 71 FVRQMHTRSGLINEW-ENGLSLAEAEQKVTEYVLRFTPEGVRPLLAGNTIGSDKKFLDHY 129 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREHF 178 MP L ++ HYR +DVST KELARRW P + + K G H+A+ DI ES+ EL YYR+ F Sbjct: 130 MPNLMSHLHYRSVDVSTFKELARRWYPAVYENRPPKNGGHRALADIIESLDELRYYRKAF 189 Query: 179 I 179 + Sbjct: 190 M 190 >UniRef50_C5KG86 Oligoribonuclease, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KG86_9ALVE Length = 204 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 81/188 (43%), Positives = 118/188 (62%), Gaps = 14/188 (7%) Query: 3 ANENNLIWIDLEMT------GLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLA 56 N+ L+W+D EMT G+ E DR++E+A +VTD +LN+L EGP + +HQ E L Sbjct: 7 TNDGVLLWVDCEMTNLGDAYGVLGETDRLLEVALIVTDKHLNVLHEGPDLVIHQPTEVLN 66 Query: 57 LMDDWNVRTHT-ASG------LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI 109 M+DW + +G L E V ST+ + EA+ E ++V G+ + GN++ Sbjct: 67 GMNDWCRKQFGWKNGQPVPAMLAEEVLKSTISEGEADRQLAEVAAEFVKEGQGLLAGNTV 126 Query: 110 GQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESV 168 D+RFL KYMP Y HYR LDVST+KELA+RW PE L+ FT K+ TH+A++DI++S+ Sbjct: 127 HVDKRFLEKYMPRFSGYLHYRVLDVSTIKELAKRWDPETLEAFTGKRATHRALEDIQDSI 186 Query: 169 AELAYYRE 176 EL +YR+ Sbjct: 187 NELKHYRD 194 >UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia vitripennis RepID=UPI00015B53D6 Length = 185 Score = 240 bits (612), Expect = 2e-62, Method: Composition-based stats. Identities = 64/175 (36%), Positives = 108/175 (61%), Gaps = 1/175 (0%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + +IWIDLEMTGL+ +D+I+E+A+++TD LNI+++ + +HQS++ M W Sbjct: 10 DRIIWIDLEMTGLNVMQDKILEVASIITDDQLNIVSDEFQMVIHQSEDVFETMIPWCQEQ 69 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 H +GL+E + S + AE + F +++VP P+ G+ + DR FL ++MP + Sbjct: 70 HNKTGLIEASRNSIFNEEMAEEELIRFFRKYVPHNTCPLAGSCLYMDRAFLQQHMPRVFE 129 Query: 126 YFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 Y +DVS++ ELA+RW +I K G H+A+ DI++S+ EL+YYR++ Sbjct: 130 YLGDEVIDVSSINELAKRWNKKIERKKQRKTGDHRALGDIKDSIEELSYYRKNIF 184 >UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribonuclease n=1 Tax=Apis mellifera RepID=UPI0000DB7BA5 Length = 212 Score = 239 bits (611), Expect = 3e-62, Method: Composition-based stats. Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 1/176 (0%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + ++W+D+EM+GLD +I+EIA ++TD NL +++ I +HQSDE L M+DW + Sbjct: 27 KNDYIVWLDMEMSGLDINTSQILEIACVITDKNLKTVSKDLNIVIHQSDEILNNMNDWCL 86 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 TH +GL+ + S + ++AE L++LK +V P+ G+S+ DR FL KYMP + Sbjct: 87 ATHQKTGLIHESRLSKITIQDAEQILLKYLKTYVKEATCPLAGSSVYIDRMFLHKYMPLV 146 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 Y HYR +D ST+KEL +RW I K H+A+ DI+ES+ EL YY+ + Sbjct: 147 NNYLHYRIIDTSTIKELIKRWNINI-TILKKDHNHRALSDIKESIKELQYYKSNIF 201 >UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E428 Length = 196 Score = 238 bits (608), Expect = 6e-62, Method: Composition-based stats. Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 1/176 (0%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + IWIDLEMTGL+PE D I+E+A ++T+ +LN L EG +HQ+D L M++W + Sbjct: 21 DRYIWIDLEMTGLNPETDTILEVACIITEPDLNPLNEGMHFVIHQNDNVLKSMNEWCLVH 80 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQW-VPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL+ +AS ++ E ++K G + + GNS+ D FL KYMP + Sbjct: 81 HEKSGLISESRASPHSLKDVEEKLFNYIKSNTFIDGTNYLAGNSVYMDLLFLKKYMPSIP 140 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 + HYR +DVS+LK L W L K+ +H+A+DDI+ S+ EL Y+ K Sbjct: 141 TFLHYRLIDVSSLKVLCNHWYSYELKNCKKEVSHRALDDIKNSIQELKTYKNIAFK 196 >UniRef50_A1A0K1 Oligoribonuclease n=8 Tax=Bifidobacterium RepID=A1A0K1_BIFAA Length = 217 Score = 236 bits (604), Expect = 2e-61, Method: Composition-based stats. Identities = 76/181 (41%), Positives = 113/181 (62%), Gaps = 4/181 (2%) Query: 2 SANENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ + LIWID EMTGLD D ++E++ + TD +LN+L EG + S + + M+D Sbjct: 11 TSEGSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSQKAVDHMND 70 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAG-KSPICGNSIGQDRRFLFKY 119 + HT SGL+ + + EA+ +E+++++ PAG K + GN+IG D++FL Y Sbjct: 71 FVRAMHTRSGLINEWEH-GLSLDEAQAKVIEYVRKFTPAGVKPLLAGNTIGSDKKFLDHY 129 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHF 178 MPEL HYR +DVST KELARRW P + + K G H+A+ DI ES+ EL YYR+ F Sbjct: 130 MPELMENLHYRTIDVSTFKELARRWYPAVYLNRPPKNGGHRALADIIESLDELRYYRKAF 189 Query: 179 I 179 + Sbjct: 190 M 190 >UniRef50_Q1CWF9 Oligoribonuclease n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CWF9_MYXXD Length = 183 Score = 236 bits (604), Expect = 2e-61, Method: Composition-based stats. Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 1/180 (0%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M ++E +W+DLEMTGLDPE IIE+ ++T +L +AE + Q +E L M+ Sbjct: 1 MISSEQRFVWLDLEMTGLDPETCSIIEVGVIITGPDLRPIAEIER-VIWQPEEVLLRMEP 59 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 HT + L+E+V+AS R AE + + + G+ + GNSI DRRFL +YM Sbjct: 60 VVREMHTRNELLEKVRASNTSLRVAERDVMALVTEHCALGEGILAGNSIHTDRRFLIRYM 119 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P LE Y HYR +DV++LK L R W P +++ H A+ D+R S++EL YYR+ + Sbjct: 120 PLLERYLHYRMVDVTSLKVLTRAWYPNLVEPRKAPSGHTALADVRASISELQYYRDTLFR 179 >UniRef50_C4YJB7 Oligoribonuclease, mitochondrial n=3 Tax=Saccharomycetales RepID=C4YJB7_CANAL Length = 237 Score = 236 bits (602), Expect = 3e-61, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 106/181 (58%), Gaps = 5/181 (2%) Query: 5 ENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWN 62 + L+W+D EMTGLD D IIEI ++T+ +L+I+ E G ++ +L M++W Sbjct: 26 KKPLVWVDCEMTGLDVFGDDNIIEICCIITNEDLDIVDENGYESTIYYPKSRLDKMNEWC 85 Query: 63 VRTHTASGLVERVKAST-MGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYM 120 + TH SGL +++ A+ E LE++K++VP + GNS+ DR F+ K Sbjct: 86 IETHGKSGLTDKILANPDRKLSVVEDELLEYIKKYVPEVRTGLLAGNSVHMDRFFMMKEF 145 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYREHFI 179 P++ + HYR +DVS++ E R P+++ F K+ G H A DI ES+ +L +YR+++ Sbjct: 146 PKVIDHLHYRNVDVSSIMEFGYRHNPKLMKMFPKKTGAHTAKSDILESIEQLKWYRKYYF 205 Query: 180 K 180 K Sbjct: 206 K 206 >UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei RepID=ORN_TROWT Length = 184 Score = 234 bits (599), Expect = 8e-61, Method: Composition-based stats. Identities = 82/180 (45%), Positives = 119/180 (66%), Gaps = 3/180 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ ++L+W+D EMTGL+PERD ++E+A +VTD +L L EG + V S E L MD+ Sbjct: 3 VAPTPSHLVWVDCEMTGLNPERDELLEVAVVVTDKDLLPLDEGVNVVVSPSSEALGAMDN 62 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + R H SGL++ ++ + EA+ E++ + V G + GNSI DR F+ +YM Sbjct: 63 YVARMHRVSGLLDE-LSNGVPVSEAQAMVKEYITKHVKTG-GIMSGNSIATDRLFITRYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFI 179 P++ A HYR +DVS++KELA RW PEI G K+G H+AM D+ ES+AELAYYREHF+ Sbjct: 121 PDVHAILHYRMIDVSSIKELAVRWAPEIYSGAPNKKGGHRAMADVLESIAELAYYREHFL 180 >UniRef50_Q4P645 Putative uncharacterized protein n=3 Tax=Ustilaginomycotina RepID=Q4P645_USTMA Length = 606 Score = 233 bits (594), Expect = 2e-60, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 9/189 (4%) Query: 1 MSANENNLIWIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 +SA++ L+WID EMTGL E DR++EIA ++TD LN + G + + L M+ Sbjct: 416 LSASDGPLVWIDCEMTGLSVENGDRLLEIACIITDGQLNPIDSGVSYVISTPQSVLDGMN 475 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELA--TLEFLKQWVP-AGKSPICGNSIGQDRRFL 116 W V H SGL + A + L +++ +P + + GN++ D+ FL Sbjct: 476 HWCVNQHALSGLTAECLDANRSYPHASVRTAILAYVRDRIPTPNTACLAGNTVHADKAFL 535 Query: 117 FKYMPELEAYFHYRYLDVSTLKELARRWKPEIL-----DGFTKQGTHQAMDDIRESVAEL 171 MPEL + HYR +DVS++KEL +RW + + H+A++DI S+ EL Sbjct: 536 HAEMPELIHHLHYRIVDVSSIKELVKRWYGDNKLWNPSEPPKHMPNHRALNDINASIQEL 595 Query: 172 AYYREHFIK 180 +YR + Sbjct: 596 KWYRSEVFQ 604 >UniRef50_C7LYK0 Exonuclease RNase T and DNA polymerase III n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYK0_ACIFD Length = 188 Score = 232 bits (593), Expect = 4e-60, Method: Composition-based stats. Identities = 88/175 (50%), Positives = 125/175 (71%), Gaps = 2/175 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L W+DLEMTGLDPER I+EIA +VTD L +AE + +H +DE+LA+M+ V+ H+ Sbjct: 2 LAWMDLEMTGLDPERCVILEIAAIVTDDELETVAELGPLVLHATDEELAVMEPVVVQMHS 61 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEAY 126 A+ L+E V+ +++ EAE L FLK +P + P+CGNSIG DRRFL ++MP++EA Sbjct: 62 ANHLLEDVRRASLTIDEAESTVLAFLKAHLPDPHQVPLCGNSIGTDRRFLARHMPKVEAL 121 Query: 127 FHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIK 180 HYR +DVS+LKELARRW PE+++ K H+A+DD+R+S+AEL YYR ++ Sbjct: 122 LHYRSIDVSSLKELARRWYPEVIEHMPQKNPAHRALDDVRDSIAELRYYRSSMLR 176 >UniRef50_A7BDJ9 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDJ9_9ACTO Length = 198 Score = 229 bits (584), Expect = 4e-59, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 2/167 (1%) Query: 15 MTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVER 74 MTGLD +RD +IE+A +VTD +L I+ G + + E L M+D+ HT+SGL++ Sbjct: 1 MTGLDVQRDALIEVAVVVTDGDLTIVDPGMDVLITPPAEALDNMNDFVRNMHTSSGLLDD 60 Query: 75 VKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLD 133 ++ S + EA L ++K++VP GK+ + GNS+G D+ FL MP + + HYR +D Sbjct: 61 LQTSGVSMEEATEQVLSYIKRFVPQQGKALLAGNSVGTDKMFLEANMPSVIDHLHYRLVD 120 Query: 134 VSTLKELARRWK-PEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 VS++KELA+RW + K G H+A+ DI ES+ EL YYR Sbjct: 121 VSSIKELAKRWYRVAFAESPDKHGGHRALADILESIQELEYYRRVLF 167 >UniRef50_A5E684 Oligoribonuclease, mitochondrial n=1 Tax=Lodderomyces elongisporus RepID=A5E684_LODEL Length = 269 Score = 226 bits (578), Expect = 2e-58, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 107/183 (58%), Gaps = 6/183 (3%) Query: 5 ENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEG--PTIAVHQSDEQLALMDDW 61 + L+W+D EMTGLD DRIIEI +VTD NL +L G ++ E L MD+W Sbjct: 74 KRPLVWVDCEMTGLDVLGEDRIIEICCIVTDENLEVLGNGDYYESTIYYPQETLDKMDEW 133 Query: 62 NVRTHTASGLVERVKAST-MGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKY 119 TH GL++R+ + + + LEFLK+++ K + GNS+ D+ F+ K Sbjct: 134 CQTTHGQLGLIQRILDNPDRTLEKVQAELLEFLKKYISGPKIGIMAGNSVHMDKFFMMKD 193 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREHF 178 MPE+ + HYR LDVS++ E +R P+++D K +H A DI ES+A+L ++RE++ Sbjct: 194 MPEIVEFLHYRLLDVSSIMEFGKRHAPKLMDLQPDKIQSHTAKSDILESIAQLKWFRENY 253 Query: 179 IKL 181 KL Sbjct: 254 FKL 256 >UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorpha longicaudata entomopoxvirus RepID=Q8B5Y0_9POXV Length = 206 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 2/175 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 NN+ W+DLEMTGLDPE D I+EI +T+ L I + + +H SD+ L MD W +T Sbjct: 29 NNIAWLDLEMTGLDPETDNILEIGCFITNDALEITSPIFHMIIHNSDDILKSMDKWCKKT 88 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS-PICGNSIGQDRRFLFKYMPELE 124 HT +GL+ V S AE ++F K + K+ + GNSI D+ FL ++MP L Sbjct: 89 HTKNGLITEVMNSKTSLEVAEKKLIQFFKAHASSDKAIILAGNSIYIDKGFLCEHMPRLY 148 Query: 125 AYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR +DVS+ E+ +R P + K+ H+A++DI++S+AE+ YY+ Sbjct: 149 PMLHYRVIDVSSFAEIFKRVNPQKYAQRPKKRCIHRAVNDIKDSLAEMQYYKSFI 203 >UniRef50_C9SMP6 Oligoribonuclease n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SMP6_VERA1 Length = 212 Score = 224 bits (571), Expect = 1e-57, Method: Composition-based stats. Identities = 66/170 (38%), Positives = 95/170 (55%), Gaps = 5/170 (2%) Query: 15 MTGLDPERDRIIEIATLVTDANLNILA-EGPTIAVHQSDEQLALMDDWNVRTHTASGLVE 73 MTGLDP+ + I+EI ++T NL L G + VHQ +L M +W H +GL E Sbjct: 16 MTGLDPDTEEILEIHCIITTGNLEPLDGPGWGVVVHQPASRLDQMGEWCTDMHAKTGLTE 75 Query: 74 RVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKYMPE-LEAYFHYRY 131 V AST ++A L ++++VP K + GN++ DR FL K + + H+R Sbjct: 76 AVLASTTTPQQAAEGLLAHIRKYVPTPKVGLLAGNTVHADRGFLAKQPYTPIVEHLHHRI 135 Query: 132 LDVSTLKELARRWKPE--ILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 +DVS+LKE A+RW P + K GTH+ +DI+ES+AE YYRE Sbjct: 136 VDVSSLKEAAKRWCPREIVEGAPVKTGTHRGREDIKESIAEARYYREVIF 185 >UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q099_IXOSC Length = 171 Score = 224 bits (571), Expect = 1e-57, Method: Composition-based stats. Identities = 71/138 (51%), Positives = 92/138 (66%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N L+WIDLE+TGL+ E +I+EIA LVTD LN+L+EG IA+HQ DE L M+DW Sbjct: 34 NNGLVWIDLELTGLELETCKIMEIACLVTDGQLNLLSEGIDIAIHQPDEVLEGMNDWCKE 93 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL + + S++ EAE L + Q VP GK + GN++ DR FL +YMPEL Sbjct: 94 HHGKSGLTQACRESSVTVEEAEQRVLSLVSQLVPPGKCHLAGNTVYMDRLFLARYMPELN 153 Query: 125 AYFHYRYLDVSTLKELAR 142 +Y HYR +DVST+KEL R Sbjct: 154 SYLHYRIVDVSTVKELCR 171 >UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus clemensi RepID=C1C170_9MAXI Length = 230 Score = 222 bits (566), Expect = 6e-57, Method: Composition-based stats. Identities = 65/181 (35%), Positives = 103/181 (56%), Gaps = 3/181 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S N L+WID EMTGLD E+D ++E+A +VTD++L + G + +HQ D L M ++ Sbjct: 48 STNLRRLVWIDCEMTGLDIEKDVLMEVAVIVTDSSLREVTPGINLIIHQPDSILNAMTEF 107 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVP--AGKSPICGNSIGQDRRFLFKY 119 +H +GL E +AS + R AE ++Q + G + GNS+G D +FL KY Sbjct: 108 PEESHALTGLTEACRASQIDLRNAEDQICRHIRQGLSGTTGTPLLAGNSVGHDLKFLQKY 167 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGT-HQAMDDIRESVAELAYYREHF 178 MP ++ HY+ LDVS++ + W +L K+ H+AM+DI+ES+ E+ ++ Sbjct: 168 MPAVKDLLHYKILDVSSINSCYQLWNKSVLHQCPKKKRLHRAMEDIKESIEEMKVLKDIM 227 Query: 179 I 179 Sbjct: 228 F 228 >UniRef50_A0BKH9 Chromosome undetermined scaffold_112, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BKH9_PARTE Length = 174 Score = 219 bits (558), Expect = 4e-56, Method: Composition-based stats. Identities = 62/161 (38%), Positives = 95/161 (59%), Gaps = 2/161 (1%) Query: 21 ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTM 80 DR+ + A ++TD L + +GP I +H + L MD+W TH ASGL + ST+ Sbjct: 9 GNDRVEQCACILTDYKLKTIIKGPHIVIHADKQVLDGMDEWCTTTHKASGLYQESLNSTV 68 Query: 81 GDREAELATLEFLKQ-WVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKE 139 +A+ L+FL Q +P P+ GNS+ DR F+ K+MP+L+ + HYR +DVS++K Sbjct: 69 TVGQAQEQILQFLNQNNIPPKVLPLAGNSVYMDRLFVMKHMPQLDQFLHYRIVDVSSIKL 128 Query: 140 LARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFI 179 L + P + K+ H+A+DDI ES+ EL YY+E F+ Sbjct: 129 LCQNLNPIVCSQQPQKKLNHRALDDILESIEELRYYQEKFM 169 >UniRef50_B6HCA9 Pc18g01380 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HCA9_PENCW Length = 245 Score = 216 bits (552), Expect = 2e-55, Method: Composition-based stats. Identities = 64/170 (37%), Positives = 94/170 (55%), Gaps = 5/170 (2%) Query: 15 MTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTHTASGLVE 73 MTGL+PE D+I++I +TDA LN+L G +H D L M W + TH +GL Sbjct: 75 MTGLNPETDKILQICCFITDAQLNLLEPTGFETVIHVPDSTLDAMSQWCIDTHGRTGLTA 134 Query: 74 RVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMP-ELEAYFHYRY 131 V+AST A + L +++Q VP + + GNS+ D+ FL ++ + HYR Sbjct: 135 AVRASTTSPSTAADSLLAYIRQHVPTPRTALLAGNSVHADKAFLACAPYSQVLDHLHYRI 194 Query: 132 LDVSTLKELARRWKPE--ILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 LDVS+LKE ARRW + + K+ H A DDI ES+ E+ +Y++ Sbjct: 195 LDVSSLKEAARRWGSDQLLEQVPRKREVHLARDDILESIEEIRFYKDKLF 244 >UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=ORN_BUCBP Length = 160 Score = 214 bits (546), Expect = 9e-55, Method: Composition-based stats. Identities = 91/156 (58%), Positives = 117/156 (75%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ + NLIWIDLEMTGL+P +IIEIATL+TD NL IL+ GP IA++Q++ QL+ MD Sbjct: 1 MNTDIKNLIWIDLEMTGLNPNIHKIIEIATLITDKNLKILSYGPVIAIYQNNHQLSFMDP 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN + HT +GL+ R+K S + AE+ T+ FLK+WVP SP+CGNSI DR+FLFKYM Sbjct: 61 WNNKMHTKNGLITRIKNSLYTEHLAEIKTITFLKKWVPKNTSPMCGNSISTDRQFLFKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG 156 P LE YFHYR +DVST+KELA RWKP+I + K+ Sbjct: 121 PTLEKYFHYRQIDVSTIKELALRWKPKIYNKLKKKT 156 >UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycotina RepID=Q5KPH7_CRYNE Length = 184 Score = 213 bits (543), Expect = 2e-54, Method: Composition-based stats. Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 5/161 (3%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ L+W+D EMTGLD DRIIEIA ++TD LN + G + + E L M DW Sbjct: 9 DDGPLVWVDCEMTGLDFLNDRIIEIAVIITDGRLNPVDGGISYIIKTPKEVLDNMGDWCR 68 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPE 122 H SGL++ S L+++++W+P G + G+S+ D RF+ MPE Sbjct: 69 EQHGKSGLIQACLDSPYSYDTVVEKVLDYIRRWIPERGAGLLAGSSVHADMRFMLMGMPE 128 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTK----QGTHQ 159 + + YR LDVS++KE+ RRW P++ + + +H+ Sbjct: 129 VMKHLSYRILDVSSVKEICRRWYPKVRAQEQESRTTECSHR 169 >UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7 RepID=A5KRR8_9BACT Length = 184 Score = 207 bits (528), Expect = 1e-52, Method: Composition-based stats. Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 5/169 (2%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 L+W+DLEMTGLDP+RDR++E+A + TD N +A VHQS + L LMDDW H Sbjct: 12 KLLWLDLEMTGLDPQRDRVLEVAAIATDWNFEEMAV-IESVVHQSPKVLDLMDDWVRSQH 70 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKS-PICGNSIGQDRRFLFKYMPELEA 125 +SGL ERV+AS + + +AE L+F+ G + GNSI QDRRF+ +Y L+A Sbjct: 71 ASSGLTERVRASDVSETDAEDILLQFIDSVYKDGDPVVLAGNSIHQDRRFIRQYWQRLDA 130 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYY 174 HYR LDVS K + ++ + F K H+A++DIR S+ EL YY Sbjct: 131 RLHYRMLDVSAWKVV---FEGKYQKRFPKPEDHRALEDIRGSIMELKYY 176 >UniRef50_Q2HAN9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HAN9_CHAGB Length = 228 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 96/219 (43%), Gaps = 55/219 (25%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVR 64 + L+WID EMTGLDPE D IIEI ++TD L +L E G VHQ+ E++ +MD+W R Sbjct: 17 DPLVWIDCEMTGLDPETDAIIEIYCIITDGQLKLLDESGWGTVVHQTKEKMGMMDEWCTR 76 Query: 65 T------------------H------------------------TASGLVERVKASTMGD 82 H SGL V ST+ Sbjct: 77 VRMSRPMLLFVSGLDTSIFHPARGSSSSMGKNGWGTVAKQSVVDGESGLTAAVIQSTVTP 136 Query: 83 REAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELA 141 ++A L ++++++P G++ + GNS+ D+ FL K P L D + Sbjct: 137 QQAADGLLAYIQKYIPERGQALLSGNSVHADQAFLRKGPPGLVPTSMPTSSDPQVALTVP 196 Query: 142 RRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 R K+GTH+A DDI ES+ E YYR + Sbjct: 197 R-----------KKGTHKAKDDILESIEEAKYYRSAIFQ 224 >UniRef50_Q6MNB4 Oligoribonuclease n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNB4_BDEBA Length = 175 Score = 205 bits (523), Expect = 5e-52, Method: Composition-based stats. Identities = 73/179 (40%), Positives = 99/179 (55%), Gaps = 9/179 (5%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N L WID+EMTGLD E++ IIE+A +VTD N L E V Q + L MD WN Sbjct: 2 NKLFWIDMEMTGLDVEKEVIIEVAAIVTDLNFKEL-ETFETVVKQPQKYLDSMDAWNTEH 60 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGK--SPICGNSIGQDRRFLFKYMPEL 123 H SGL +V + M + E ++ +K+ P K + GNSI QDR F+ KYMPE Sbjct: 61 HKKSGLTAKV-PNGMDPDQVEAKLVDMVKKHFPDPKDKPVLAGNSIMQDRLFINKYMPEF 119 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYY--REHFIK 180 HYR +DVS+ K + + + K H+A++DIRES+ EL +Y + HF K Sbjct: 120 AGRLHYRMVDVSSWKVII---NNKFKYVYQKANKHRALEDIRESIQELRHYTDKMHFTK 175 >UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFP7_9BACT Length = 193 Score = 200 bits (510), Expect = 1e-50, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 99/176 (56%), Gaps = 6/176 (3%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ WIDLEMTGLDP DRI+E A ++T+ L + E AV Q E L M+DW Sbjct: 2 SKRRYCWIDLEMTGLDPATDRIVEAAVIITNKQLEPVFE-WESAVRQPQEVLEGMNDWCK 60 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKYMPE 122 H SGL++R++ + + E + E ++ I GNSI QDR+F+ +Y+P+ Sbjct: 61 HHHAESGLLDRIQD-GITEEELDDKLAEITLKYFKKNNPCVIAGNSIAQDRKFIDRYLPK 119 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR LDVS+ K + R + F K+ +H+A+DDIRES+AEL +Y Sbjct: 120 FSERIHYRMLDVSSFKIVFRE---MLGREFKKENSHRALDDIRESIAELKHYMTAI 172 >UniRef50_A3D8L9 Exonuclease, RNase T and DNA polymerase III n=4 Tax=Shewanella baltica RepID=A3D8L9_SHEB5 Length = 204 Score = 195 bits (497), Expect = 4e-49, Method: Composition-based stats. Identities = 76/193 (39%), Positives = 101/193 (52%), Gaps = 18/193 (9%) Query: 5 ENNLIWIDLEMTGLDPERDR---------IIEIATLVTDANLNILAEGPTIAVHQSDEQL 55 E ++ DLE GL+ D I E+A +VTD+ LN + E + VHQ DE + Sbjct: 2 EQFFLFGDLETGGLNGRLDNGMLGMEYYPIFELAFIVTDSELNQVGEALHVVVHQDDEHI 61 Query: 56 ALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQ-WVPAGKS------PICGNS 108 A +W + HT SGL+ V+AS++ +AE +E LK +P GNS Sbjct: 62 ARSHEWAIDVHTKSGLLAAVRASSVSLAQAEQMVIEHLKALGIPKHDRKAKTGVVFAGNS 121 Query: 109 IGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGF--TKQGTHQAMDDIRE 166 I DR F+ MPEL Y HYR LD+S L AR W PE+ KQ H+A+ DIRE Sbjct: 122 IMFDRSFIMCQMPELHEYMHYRQLDISALGLAARAWAPEVERNAIKAKQYQHEALADIRE 181 Query: 167 SVAELAYYREHFI 179 S+AEL YYR+ Sbjct: 182 SIAELKYYRDELF 194 >UniRef50_Q8QNE0 EsV-1-139 n=1 Tax=Ectocarpus siliculosus virus 1 RepID=Q8QNE0_ESV1 Length = 274 Score = 195 bits (497), Expect = 5e-49, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 53/230 (23%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 NE WID+E TGLD + + I+EI +VTD +LN + + H +A W Sbjct: 39 NEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSTWCR 98 Query: 64 -----RTHTASGLVERVKASTMGDREAELATLEFLKQWVPA------------------- 99 R +GL E S + EAE F + Sbjct: 99 KKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTSQITSSQPFFDR 158 Query: 100 ----------------------------GKSPICGNSIGQDRRFLFKYMPELEAYFHYRY 131 K + G+++ DR FL KY P L+ +FHYR Sbjct: 159 TLGANGTFIGASDTSRYHHQHHPRRSNFKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRV 218 Query: 132 LDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYREHFIK 180 +DVST E+ RRW+P++ ++ G+H+A DDI +S++ + +++E ++ Sbjct: 219 VDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKETLLQ 268 >UniRef50_A4V739 Plant-inducible oligoribonuclease n=2 Tax=Pseudomonas fluorescens RepID=A4V739_PSEFS Length = 195 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 9/182 (4%) Query: 1 MSANENNLIWIDLEMTGLDPERDR------IIEIATLVTDANLNILAEGPTIAVHQSDEQ 54 M+ ++ L W+DLE TG DR I+EI +VTD + +LA + Sbjct: 6 MTRSQRRLPWLDLETTGFTELFDRRVYEHRILEIGAVVTDEHFTVLASTSIVIQQPMVRV 65 Query: 55 LALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQW-VPAGKSPICGNSIGQDR 113 L L D+ R HT +GL + V S + AE ++F +Q V P+CG+ I DR Sbjct: 66 LELSDEAVTRMHTNNGLFDEVVKSFTTLKAAEHQLIQFYRQNGVSKKVEPLCGSGIHFDR 125 Query: 114 RFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAY 173 F+ MPEL + +YR LD+S++KE + P +K+ H+A+ DI ESVAE Sbjct: 126 MFIEAQMPELHDFLYYRNLDISSVKEFLKTISPSF--EPSKRQQHRALPDILESVAEAKT 183 Query: 174 YR 175 YR Sbjct: 184 YR 185 >UniRef50_B8HIN1 Putative oligoribonuclease n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HIN1_ARTCA Length = 199 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 13/188 (6%) Query: 1 MSANENNLIWIDLEMTGLDPERDRI-IEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 ++AN +N++W+D E TGL + + +E A ++TD LN LA I +H ++E+LA M Sbjct: 3 ITANPDNILWVDYEATGLMSDPFTVPLEGAAIITDGQLNELAVLEGITIHATEEELAYMG 62 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC-----------GNS 108 D+ HT +GL+++V+AST+ + + A F + P + GNS Sbjct: 63 DFVRDMHTKTGLLDKVRASTVTRDQFDNALASFAAPYFPTKGEELADGTKYRGMVIGGNS 122 Query: 109 IGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDG-FTKQGTHQAMDDIRES 167 + D K+ P+ YR +D+S L EL RRW + K H A+ DIR Sbjct: 123 VKFDFDVTEKFFPQTRKNMDYRVIDISGLGELVRRWSYDYWKAMPPKLSDHTALTDIRAG 182 Query: 168 VAELAYYR 175 V EL YYR Sbjct: 183 VNELRYYR 190 >UniRef50_A6DMP4 Oligoribonuclease n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMP4_9BACT Length = 182 Score = 189 bits (481), Expect = 3e-47, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 5/173 (2%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N L WID+EMTGLDP+ +RI+EIA L+TD L+I+ + L MD+WN RT Sbjct: 2 NKLFWIDMEMTGLDPDENRILEIAILITDHKLDIID-RFHAVIRTPKAILDGMDEWNTRT 60 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 HT++GLV+ +E E+ L + + +CG+S+ DR F+ K+MP Sbjct: 61 HTSNGLVKEAVNGRF-IQEVEIDLLNLADKHFANKQIFLCGSSLSLDRMFIEKFMPSFAK 119 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR +DVS+ K + + + + F KQ H+AM+DI ES+ EL Y + Sbjct: 120 KLHYRIVDVSSWKAIFQTF---LDLRFHKQDAHRAMNDIEESLRELKLYLSYI 169 >UniRef50_Q0UIM9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UIM9_PHANO Length = 473 Score = 188 bits (478), Expect = 7e-47, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 5/150 (3%) Query: 26 IEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDRE 84 + +A VTDA++N+L E G +H S EQL M +W H SGL + ST + Sbjct: 1 MSLAAFVTDADMNLLDESGYEAVIHHSREQLDRMGEWCTSHHGDSGLSQDCLDSTTTAEQ 60 Query: 85 AELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELE-AYFHYRYLDVSTLKELAR 142 A LE++K++VP + GNS+ D+ FL K ++ + HYR LDVS++KE AR Sbjct: 61 AAEGLLEYIKKYVPERRTGLLAGNSVHADKSFLVKQPYKVVTDHLHYRLLDVSSIKEAAR 120 Query: 143 RWKPE--ILDGFTKQGTHQAMDDIRESVAE 170 RW P+ + KQ H+A DI ES+ E Sbjct: 121 RWAPKDVLKKIPRKQMLHEARADILESIEE 150 >UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SLB2_TETNG Length = 248 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 69/106 (65%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++W+DLEMTGLD E+D+IIE+A L+TD++LNILAEGP + ++Q DE L M +W Sbjct: 4 QRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWCKEH 63 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQ 111 H SGL + V+ S + +AE L F++Q P G+ P+ G + Sbjct: 64 HGKSGLTQAVRNSKITLEQAEYEFLSFVRQHTPPGQCPLAGGQLCA 109 Score = 68.6 bits (167), Expect = 9e-11, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 140 LARRWKPEILDG-FTKQGTHQAMDDIRESVAELAYYREHFIKL 181 RRW PE K+ TH+A+ DI ES+ EL +YR ++ Sbjct: 192 ACRRWFPEEYKQVPPKKATHRALSDIYESIKELQFYRSSIFRV 234 >UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GR95_BIFLI Length = 185 Score = 175 bits (445), Expect = 5e-43, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 11/182 (6%) Query: 1 MSANEN-----NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQL 55 MS ++N L+W+D E TGLDP +D I+EI + T +L + +G VH + Sbjct: 1 MSTHDNDDKPVRLLWVDTETTGLDPRKDPILEIGMIATGPDLKPVDDGFHTTVHWEGKP- 59 Query: 56 ALMDDWNVRTHTASGLVERV-KASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDR 113 ++ H +GL+ S A L+ +++ + + G + G+++ DR Sbjct: 60 ---SEFIQSMHGPNGLLAECAHPSAPNMFAAALSARDYVVRHLGQGVRLLPAGSTVRFDR 116 Query: 114 RFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAY 173 L +MP + +R LD+S + E R W P L G H+ M + +++ Sbjct: 117 DMLDSWMPGVLDGCSHRSLDISAVCEAVRMWNPAALPGMEPSTDHRVMHCLADTLRYAHA 176 Query: 174 YR 175 YR Sbjct: 177 YR 178 >UniRef50_B5LWG6 Putative oligoribonuclease n=1 Tax=Feldmannia species virus RepID=B5LWG6_9PHYC Length = 250 Score = 172 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 49/219 (22%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 N WID+E + LD ++EIA +VTD+ LN+ + H + + +W Sbjct: 19 RNNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCK 78 Query: 64 R-----THTASGLVERVKASTMGDREAELATLEFLKQWV--------PAGKS-------- 102 ++ +GL + S +A L F + + PA KS Sbjct: 79 EKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYSTHEIGRGRPAHKSRTFFDRTS 138 Query: 103 ---------------------------PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVS 135 + G+++ DRR + K+ P L Y ++ +DV+ Sbjct: 139 GANGMKLSPYDISCQVQNFTGTRRSQGLLAGSTVYFDRRIIEKHFPVLRKYLSHKNVDVT 198 Query: 136 TLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAY 173 +L E A+R+ P++++ K H+AMDDI +S+ Y Sbjct: 199 SLLETAKRFHPDLIENKPKPTMVHRAMDDILDSLTLYKY 237 >UniRef50_Q6XM84 FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a RepID=Q6XM84_9PHYC Length = 238 Score = 169 bits (428), Expect = 5e-41, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 90/225 (40%), Gaps = 57/225 (25%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N WID+E + LD + ++E+A +VTD +LN+ + H + + +W + Sbjct: 10 NPWFWIDMETSSLDFSQSEVLEVALVVTDHHLNVWDSLHLVIHHPINILMLKSSNWCKQR 69 Query: 66 -----HTASGLVERVKASTMGDREAELATLEFLKQWV----------------------- 97 + +GL + S +A L+F + + Sbjct: 70 FCSLKYGGNGLFDECHYSETSIADATHKMLQFFEYYCTHDIGTGSRRPPPSERSFFDRTR 129 Query: 98 ----------------------------PAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 ++ + G+++ DRR + + P L+ Y + Sbjct: 130 GTNGVLLSPLRCTHRDIPKQCTTTPGGSKKKQALLTGSTVYFDRRIIETHFPLLQKYLSH 189 Query: 130 RYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAY 173 + +DV+T+ E A+R++P+++ K H+AMDDI +S+A Y Sbjct: 190 KNIDVTTMLETAKRFRPDLMQYKPKPLMKHRAMDDIMDSLALYRY 234 >UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NXF4_HAEIN Length = 115 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 66/99 (66%), Positives = 80/99 (80%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS ++ NLIWIDLEMTGLDPE++RIIEIAT+VTD NLNILAEGP +AVHQSDE L M+D Sbjct: 1 MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPA 99 W +TH+ +GL+ERVKAS + +R AEL TL+FLK Sbjct: 61 WCQKTHSENGLIERVKASKLTERAAELQTLDFLKNGCQK 99 >UniRef50_C7TNW1 Putative uncharacterized protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=C7TNW1_9BILA Length = 108 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 88 ATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPE 147 L FL++ P+ GNS+ RRF+ KYMP LE YR +D ST+KELA RW P Sbjct: 10 QILAFLEREAVGETCPLAGNSVHFHRRFIMKYMPRLEKRLRYRIVDASTIKELAARWYPN 69 Query: 148 ILD-GFTKQGTHQAMDDIRESVAELAYYREHFIK 180 L +K+G H A++DIR S+ EL YYR K Sbjct: 70 ELKLAPSKKGAHSALNDIRGSIGELRYYRSSIFK 103 >UniRef50_Q5KRE9 Probable oligoribonuclease n=2 Tax=Corynebacterium glutamicum RepID=Q5KRE9_CORGL Length = 219 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 I +DLE TGLD I+E+ ++ D +L +A + +++ + H Sbjct: 7 FIGLDLETTGLDAHSGVILEVGIIIFDDDLMPIAARSWLTNELVEKESIVSAPVVEVMHE 66 Query: 68 ASGLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 SGL E +K T R+ E ++ + A K P+ G+S+ DR +L +MP+L Sbjct: 67 ESGLWEDLKTGHTQPLRQVEAEASAWILE-AGANKLPMLGSSVTFDRTWLDHHMPQLHRM 125 Query: 127 FHYRYLDVSTLK 138 FHYR +D +++ Sbjct: 126 FHYRSVDATSVL 137 >UniRef50_A5B9I7 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5B9I7_VITVI Length = 1027 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Query: 117 FKYMPELEAYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYR 175 KYMP+L + F + +DVS++K L RW P + +K+ H+AMDDIRES+ EL YYR Sbjct: 957 AKYMPDLASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAMDDIRESIRELKYYR 1016 Query: 176 EHFIK 180 E+ K Sbjct: 1017 ENIFK 1021 >UniRef50_UPI00005A0A92 PREDICTED: similar to small fragment nuclease (predicted) n=1 Tax=Canis lupus familiaris RepID=UPI00005A0A92 Length = 161 Score = 97.9 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 31/56 (55%), Positives = 40/56 (71%) Query: 13 LEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 L+MTGLD E+D+IIE+A L+TD++LNILAEGP + + Q DE L M DW H Sbjct: 71 LQMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGK 126 >UniRef50_C7J1M8 Os04g0303950 protein (Fragment) n=4 Tax=Oryza sativa RepID=C7J1M8_ORYSJ Length = 69 Score = 92.5 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYRE 176 KYMP L A F + +DVS++ L RW P E K+ H+AMDDIRES+ EL YY+E Sbjct: 1 KYMPHLAAIFSHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKE 60 Query: 177 HFIK 180 + K Sbjct: 61 NIFK 64 >UniRef50_B3DTZ9 Oligoribonuclease n=2 Tax=Bifidobacterium RepID=B3DTZ9_BIFLD Length = 214 Score = 80.9 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 23/188 (12%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A + L+WID E TGLDP + ++E+ VTD + VH + +W Sbjct: 21 AKPHMLLWIDTETTGLDPNQCELLEVGMQVTDLKAETRGGSLHLIVHP-----DNVRNWA 75 Query: 63 V--------RTHTASGLVERVKASTMGDREAELATL---EFLKQWVPAGKSPICGNSIGQ 111 H A+GL+ + + + L EFL + G ++ Sbjct: 76 NHPEMLKAYEMHLANGLMLACAEAPKTGYDYKHTALNIHEFLNDQLSQYTLHPAGTNVDF 135 Query: 112 DRRFLFKYMPELEAY-----FHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRE 166 D R L ++ + H+R LD+++ + + GTH+ D IR Sbjct: 136 DLRQLDVHLSRHLEHPITQGLHHRKLDLTSFRLADQAIGGNPYQN--HAGTHRVQDCIRR 193 Query: 167 SVAELAYY 174 + + Y Sbjct: 194 DINDYTAY 201 >UniRef50_B7GTG1 Putative uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GTG1_BIFLI Length = 189 Score = 80.1 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 14/185 (7%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ L+W+D+E TG DP D ++EI T + + Sbjct: 1 MTRKTEALLWVDIETTGTDPRHDLMLEIGLRCTSMDAKTEYARYESVIKPGVLPTDRSFA 60 Query: 61 WNVRTHTASGLVERVKASTM---GDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFL 116 + R H +GL++ V ++ LA ++F + G N +G D FL Sbjct: 61 YAHRMHEENGLIDEVIDASPELCSTARVALAVIDFTQSMAETHVLHPAGTNMMGFDLPFL 120 Query: 117 FKY------MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMD----DIRE 166 Y YR LD++ ++ + + +T+ +H+ D DI E Sbjct: 121 EHYLFTEDQWGRFHRLLSYRALDMTAIRLTQTALGADPYEHYTQTKSHRVTDCLDMDISE 180 Query: 167 SVAEL 171 + L Sbjct: 181 YIEWL 185 >UniRef50_B6XUS8 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XUS8_9BIFI Length = 192 Score = 70.9 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 11/176 (6%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE----GPTIAVHQSDEQLALMDDWNV 63 L+W+D E TG D +E+ TD +L E + L M Sbjct: 15 LLWLDFETTGTDRNDSLPLEVGMECTD----VLGEHSYGSLHRIIRPDYLDLLDMSPMAF 70 Query: 64 RTHTASGLVERVKAS---TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 HT +GL+ + A E+L+ G ++ D FL + Sbjct: 71 SMHTDNGLLFELLNGSDRNDCVEAVVNAVEEYLESLSQRFTLVPAGTNVDFDLDFLKRLD 130 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYRE 176 + + YR D++TL+ R +GTH+ D IR + + YR+ Sbjct: 131 LNPDRWLSYRKFDLTTLRRYLRFIDCPEDPYEGHRGTHRVRDCIRRDINDYIRYRK 186 >UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 Tax=Haliangium ochraceum DSM 14365 RepID=D0LN23_HALO1 Length = 180 Score = 66.7 bits (162), Expect = 3e-10, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 11/112 (9%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 L++ID E TGLDPER I+EIA + L E + + E+L D + Sbjct: 2 QPLVFIDCETTGLDPERHEILEIAAIRVHPQ--TLDEERELVLRVRPERLEDADPEALEV 59 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 +G R A + +A L+ + + G+++ DRRFL Sbjct: 60 ---NGYRRRAWADAVSLGDAMAELAPMLE------GAVLAGHNVAFDRRFLE 102 >UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogaceae RepID=DPO3_THEP1 Length = 1367 Score = 60.9 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 24/172 (13%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDD 60 S + +D E TGLDP+ D IIEI + + D I+ E + S E + Sbjct: 352 SFENATFVVLDFETTGLDPQVDEIIEIGAVKIQDGQ--IVDE-YHTLIKPSREISRRSSE 408 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 +G+ + + + E L FL+ + N+ D RFL ++ Sbjct: 409 -------ITGITQEMLENKRSIEEVLPEFLGFLE-----NSIIVAHNA-NFDYRFLRLWI 455 Query: 121 PELEAYFHYR-YLDVSTL-KELARRWKPEILDGFTKQGT-----HQAMDDIR 165 ++ R Y+D L K L + + K G H+A+DD R Sbjct: 456 KKVMGLDWERPYIDTLALAKSLLKMRSYSLDSVVEKLGLGPFRHHRALDDAR 507 >UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlamydiales RepID=C4PPS2_CHLTJ Length = 250 Score = 60.1 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 35/186 (18%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +D E TGLD ++DR+IE A + + + + +H A + H Sbjct: 9 FVCLDCETTGLDVKKDRVIEFAAIRFTFD--EIIDSVEFLIHPERAVSAES----QKIHK 62 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 S + + E F K+ + I G+ +G D + L + L Sbjct: 63 IS---DAMLRDKPKFGEVFSRIKGFFKE-----RDHIVGHHVGFDLQVLSQESERLGETL 114 Query: 128 ---HYRYLDV------------STLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELA 172 H+ +D ++L+ LAR + QG H+AM D+ +V Sbjct: 115 LPKHHYVIDTLRLAKEYGDSPNNSLEALARHFN------VPHQGNHRAMKDVEMNVKVFK 168 Query: 173 YYREHF 178 + + F Sbjct: 169 HLTKRF 174 >UniRef50_C7G8J4 Putative DNA polymerase III, alpha chain n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8J4_9FIRM Length = 235 Score = 58.6 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 36/177 (20%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 IDLEMTGL+ + D I+E+ + V + + + Q+ + + + + Sbjct: 7 IDLEMTGLNAKTDHILEVGAVRVRNHQ---AVDKFGAILCQNVKIPEKVTE-------LT 56 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 G+ E + M EA EF+ G+ I G ++ D FL ++ + Sbjct: 57 GITEAMVQGGMEKEEAMRQFFEFI------GEDIIVGQNVIFDYGFLKQW--AVNHNMPL 108 Query: 130 RYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD------IRESVAE 170 V TLK LAR++ P+ G ++ H+A DD I E++ E Sbjct: 109 ERSAVDTLK-LARKFLPKEQKKDLESLCAYFGVKRENAHRAFDDAYETWQIYEALRE 164 >UniRef50_B1I276 DNA polymerase III, epsilon subunit n=3 Tax=Bacteria RepID=B1I276_DESAP Length = 921 Score = 57.0 bits (137), Expect = 3e-07, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 61/168 (36%), Gaps = 32/168 (19%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TGLDP+ D I+E+ + + P H + R + Sbjct: 5 FVVLDLETTGLDPQADEIVEVGLV------RVEDGKPGAVFHA---LVRPSRPLPARIKS 55 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +GL + A E A FL G P+ G+ + D FL ++ A Sbjct: 56 LTGLDDADLAERPDWSEVRPAVTAFL------GNEPVVGHHVHFDLAFLERHA-GYRATQ 108 Query: 128 HYRYLDVSTLKELARRWKPEILDG----------FTKQGTHQAMDDIR 165 Y +D LAR P + ++ H+AM+D R Sbjct: 109 AYDTVD------LARLVLPGLPSYRLELLCAHLDLPERPGHRAMEDAR 150 >UniRef50_A5UUI5 DNA polymerase III, epsilon subunit n=6 Tax=Chloroflexi (class) RepID=A5UUI5_ROSS1 Length = 956 Score = 55.5 bits (133), Expect = 8e-07, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 54/163 (33%), Gaps = 32/163 (19%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 ID+E TGL+ D IIEIA + +A+ + E + V +G Sbjct: 8 IDVETTGLEAGVDEIIEIAAVKFNAD--EVLETFSTLVQPVHSLPLNSS-------RLTG 58 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY---MP------ 121 + + AS E FLK + P+ G+++ D R L +P Sbjct: 59 ITADMLASAPRFAEVAPRFAAFLKNY------PLVGHNVEFDLRMLRAQGMRLPQPAFDT 112 Query: 122 -ELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDD 163 EL R R G H+A+ D Sbjct: 113 FELATLLMPRT-------PAYRLSALAATLGIHHDEAHRALSD 148 >UniRef50_C2BET5 3'-5' exonuclease and CRISPR-associated Cas2 family protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BET5_9FIRM Length = 295 Score = 55.5 bits (133), Expect = 8e-07, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 25/163 (15%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 IDLE TGLDP DRIIEI + + + + Q + + + +G Sbjct: 132 IDLETTGLDPINDRIIEIGAIKIGKE----NKEYSSIIWQDIKLSEKISN-------ITG 180 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL-----FKYMPELEA 125 + + ++ A ++F+ G+ + G +I D +F+ + P+++ Sbjct: 181 ISDEDIKKGKDEKNAINEFIDFI------GEDTLVGYNINFDIKFINESLKRQEKPKIKN 234 Query: 126 YFHYRYLDVSTLKELARRWKPEIL---DGFTKQGTHQAMDDIR 165 + V K + +K E + G K H+A++D++ Sbjct: 235 MTYDVMQYVKNDKLFLKNYKLETVIKEYGINKNVPHRALEDVK 277 >UniRef50_A5D2F3 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2F3_PELTS Length = 937 Score = 55.1 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 15/110 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++ DLE TGLDP DRIIEI LV +L I+ V+ + + Sbjct: 5 IVVCDLETTGLDPLSDRIIEIG-LVRLKDLKIVD-IYHTMVNPGRPLPLKIKN------- 55 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 +GL + AS L F+ G +PI G++I D FL Sbjct: 56 LTGLDDSDLASAPAFSGVREKVLGFI------GDAPIAGHNIRFDMGFLA 99 >UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamydiales RepID=Q252U5_CHLFF Length = 249 Score = 55.1 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 70/189 (37%), Gaps = 34/189 (17%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + + +D EMTGLD ++DRIIE A + N++ ++ A Sbjct: 5 KDTIFVCLDCEMTGLDVKKDRIIEFAAKRFTFD-NVIDSM-ETLINPDRVISAES----Q 58 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 R H S + + E FLK+ I G+S+G D + L + + Sbjct: 59 RIHRIS---DAMLKDQPRISEVFPKIQAFLKEG-----DYIVGHSVGFDLQVLTQEAERI 110 Query: 124 EAYF--HYRYLDV------------STLKELARRWKPEILDGFTKQGTHQAMDDIRESVA 169 F Y +D ++L+ LA + G H+AM D+ ++ Sbjct: 111 GETFLSKYCIIDTLRLAKEYGDSPNNSLEALAVHFN------VPYDGNHRAMKDVEININ 164 Query: 170 ELAYYREHF 178 ++ + F Sbjct: 165 IFKHFCKRF 173 >UniRef50_C0FUI4 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUI4_9FIRM Length = 241 Score = 54.3 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 28/167 (16%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 IDLEMTGL+ + DRI+E N++ + ++ + + + +G Sbjct: 8 IDLEMTGLNAKTDRILEAGAARVRG--NVVTATFSEIINPKRKLPEKVV-------SLTG 58 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + A A +F+ G+ + G ++ D FL ++ + F Sbjct: 59 ITNEMAAQGKETDATLAAFFDFI------GEDILVGQNVIFDYSFLKQWAVNHKRTFERN 112 Query: 131 YLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRES 167 +D TLK LAR++ P+ G + H+A+DD+ E+ Sbjct: 113 AVD--TLK-LARKFLPQEQKKDLASLCSYFGIERVHAHRALDDVMET 156 >UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales RepID=A6VXX3_MARMS Length = 484 Score = 54.0 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 71/219 (32%), Gaps = 58/219 (26%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S+ + W D E TG DP RDR ++ A + TD + N + E +++ L Sbjct: 3 SSGPTSFFWFDFETTGTDPARDRPMQFAGIRTDLDFNPIGEPIMFYCRLAEDVLPQ---- 58 Query: 62 NVRTHTASGLVERVKASTMGDREA------ELATLEFLKQWVP-AGKSPICGNSIGQD-- 112 E + + ++A E ++ ++ + G + N+I D Sbjct: 59 ----------PEACLLTGISPQDANREGLCEAEFMQAVEAELSQPGTCALGYNTIRFDDE 108 Query: 113 -------RRFLFKYMPELEAYFH-YRYLD----------------------VSTLKELAR 142 R F+ Y E + + +D VS E Sbjct: 109 VVRYGFYRNFIDPYTREWQNNCSRWDMIDLVRMTYAMRPEGIVWPKNEDGQVSMKLEALT 168 Query: 143 RWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 + +G + H A+ D+ ++ R KL Sbjct: 169 K-----ANGIAHEQAHDALSDVYGTIEIAKLIRSKQPKL 202 >UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas RepID=B4SPA5_STRM5 Length = 479 Score = 53.6 bits (128), Expect = 3e-06, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 44/204 (21%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL-MDDWNVR 64 ++ ++ DLE G DP R RI + A + TDA+LN + + V +D+ L M Sbjct: 3 DSFLFYDLETFGQDPRRTRISQYAAIRTDADLNEIDTPVSFFVRPADDLLPSPMATLVT- 61 Query: 65 THTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 G+ ++ A + + EA E L + G + N++ D F+ L Sbjct: 62 -----GITPQQALAEGISEAEAFDRINEQLSR---PGTCALGYNTLRFDDEFVR---YGL 110 Query: 124 EAYFH------YRY----LDVSTLKELARRWKPE--------------------ILDGFT 153 FH +R D+ + L R +PE + Sbjct: 111 FRNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPEGIQWPLREDGATSFKLEHLAEANNVR 170 Query: 154 KQGTHQAMDDIRESVAELAYYREH 177 + H+A+ D+R ++ +++ Sbjct: 171 EGDAHEALSDVRATIGMARLFKQS 194 >UniRef50_C4ZI99 DNA polymerase III, epsilon subunit n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZI99_EUBR3 Length = 245 Score = 53.2 bits (127), Expect = 4e-06, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 30/168 (17%) Query: 11 IDLEMTGLDPERDRIIEI-ATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 IDLEMTGL + D+IIEI A V + + + V+ R + Sbjct: 13 IDLEMTGLSAKNDKIIEIGAARVRGGE---IVDTISTLVNPKQHI-------PQRVQELT 62 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 G+ + + EA L F+ G I G ++ D FL ++ + Sbjct: 63 GITDSDVENAADMDEAVDNLLNFI------GDDIILGQNVTFDYSFLKQWAVNHKRTLSL 116 Query: 130 RYLDVSTLKELARRWKPE----------ILDGFTKQGTHQAMDDIRES 167 D TLK +AR+ P G +++ H+A+DD E+ Sbjct: 117 NAYD--TLK-IARKCLPAEQSKKLEDLCEYFGVSRKNAHRALDDAIET 161 >UniRef50_B0P1Y1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P1Y1_9CLOT Length = 235 Score = 52.4 bits (125), Expect = 6e-06, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 17/107 (15%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 DLE TGL P+ D+IIEI + + D ++ +H E + + +G Sbjct: 8 DLETTGLSPDSDQIIEIGAVKIRDGK---ISGKYNCIIHPEIEVSDFIIN-------LTG 57 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 + + + +E LEF +G PI G+++ D +F+ Sbjct: 58 ISRDMLRKGIPLKEGVEEFLEF------SGDLPILGHNVMFDYKFMK 98 >UniRef50_A6LV05 Exonuclease, RNase T and DNA polymerase III n=6 Tax=Clostridium RepID=A6LV05_CLOB8 Length = 976 Score = 52.0 bits (124), Expect = 8e-06, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 63/177 (35%), Gaps = 34/177 (19%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +N+I++D+E TGLD IIEI + N + + + Sbjct: 10 DNVIYLDIETTGLDETCSEIIEIGAV---KVKNGVITTYNTLIRPRGRVPISIYSLC--- 63 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC--GNSIGQDRRFLFKYMPEL 123 S L E S + LEFL+ IC GN +R+FL Y+PE+ Sbjct: 64 ---SDLKEADLLSARSLNSIKQEVLEFLEDL-----PLICHNGN---FERKFLSFYIPEI 112 Query: 124 EAYFHYRYLDVSTLKELARRWKPEI--------LDGFTKQGTHQAMDDIRESVAELA 172 + +D L + W+ E + K H+ + D S+ L Sbjct: 113 KN----TIMDSMELAIILEPWRKEYNLNSLIKEITNLNKDELHRGLSD---SIDTLK 162 >UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIP6_9BACT Length = 261 Score = 51.6 bits (123), Expect = 1e-05, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 31/179 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIA----VHQSDEQLALMDD 60 + +++ DLE TGL+P DRIIEI + + +G V+ + + Sbjct: 6 QRPIVFFDLETTGLNPTEDRIIEICCI------KVHPDGKRDIKTRRVNPEKPISSEASE 59 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFKY 119 +G+ + ++ +F + I G N + D R L + Sbjct: 60 -------ITGITDEDVKDEPTFKQMAKGIYKFFE------GCDISGYNIMRFDLRVLTEE 106 Query: 120 MPEL---EAYFHYRYLDVSTL--KELARRWKPEILDGFTK--QGTHQAMDDIRESVAEL 171 + +DV + K+ R + + K +G H A +D+ ++ L Sbjct: 107 FKRAGISFDASAHDLVDVQRIFHKKEPRTLEAALRFYCKKDLEGAHAAENDVIATIDVL 165 >UniRef50_C8WA42 DNA polymerase III, epsilon subunit n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8WA42_ATOPD Length = 342 Score = 50.9 bits (121), Expect = 2e-05, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 34/177 (19%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +DLE TGLD IIEIA L V D + E + +H E + + Sbjct: 81 VDLETTGLDVHYCEIIEIAALKVVDGK---ITEEFSSLIHPPREIPSGAT-------AIN 130 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFKYMPELEAYFH 128 + + + + F+K + P+ G NS+ D L + + Sbjct: 131 HITNHMVKNAPTLDKVIPQFDTFVKGF------PLIGHNSLRYDAIVLEENFFRRDFLCD 184 Query: 129 YRYLDVSTLKELARRWKP--------EILDGFTKQGTHQAMDD------IRESVAEL 171 Y + D T K + +P + L+ H+A+ D I E + E+ Sbjct: 185 YVWYD--TYKLARQILEPPYKLINIAKRLNVKQHGKAHRALADCYMTYGIYEKMREI 239 >UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepID=Q4K7B4_PSEF5 Length = 497 Score = 50.9 bits (121), Expect = 2e-05, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 41/200 (20%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL-MDDWNVRTH 66 L W D E TG++P DR +++A + TD LN + E + SD+ L M + T Sbjct: 26 LFWYDYETTGINPRCDRPLQVAGIRTDLALNEIDEPVNLYCQPSDDILPHPMA--CMITG 83 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD---------RRFLF 117 G + + G EA+ T +Q G + N++ D R F Sbjct: 84 ITPG-----RLAEQGLGEADFMTRVH-EQLARPGTCGVGYNTLRFDDEMTRYSLYRNFFD 137 Query: 118 KYMPELE-AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-------------------T 157 Y E + + +DV A +P+ + +QG Sbjct: 138 PYAREWQGGNSRWDLIDV---VRTAYALRPQGIVWPEEQGQVSLKLERLTAANGIDHGQA 194 Query: 158 HQAMDDIRESVAELAYYREH 177 H A+ D+R ++A R+ Sbjct: 195 HDALSDVRATIALARLVRDK 214 >UniRef50_B7V8D9 Probable nuclease n=6 Tax=Pseudomonas aeruginosa RepID=B7V8D9_PSEA8 Length = 208 Score = 50.5 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 26/166 (15%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +DLE T LDP R I+ I ++ ++ E + V A +R H Sbjct: 35 LDLETTSLDPRRADILSIGAVLVRRGKLVMGERLELYVEPPPSLDAES----IRIHK--- 87 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY-FHY 129 L + +A L F+ G P+ G + D L +++ +L H Sbjct: 88 LRRADLEGQLQLEQALRQVLAFI------GDRPLLGYYLSFDVAVLNRHLRQLLDRQLHN 141 Query: 130 RYLDVSTLK-ELARRWKPEI-----------LDGFTKQGTHQAMDD 163 +++S+L R P+ G H A+ D Sbjct: 142 PSIEISSLYHRKVSRHFPDAHIDLRFDTLARALDVPVSGRHTALGD 187 >UniRef50_Q3K0L7 Exonuclease, DNA polymerase III, epsilon subunit family n=8 Tax=Firmicutes RepID=Q3K0L7_STRA1 Length = 604 Score = 50.5 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 67/166 (40%), Gaps = 17/166 (10%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 +N I D+E TGL+ ++DRI+E+ ++ N ++ ++ + ++ + D Sbjct: 50 KNRFIAFDIETTGLNSQQDRIVEVGAVLF-ENGKVVDSYESLV----NAKVNISADVTR- 103 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL- 123 + + R+ + + + + FL + GK+P+C ++ D FL + L Sbjct: 104 ---INNITNRMIKNAPSENQVYYELVNFLGDAL-NGKTPVCAHNAKFDMGFLCNTLSRLG 159 Query: 124 ----EAYFHYRYLDVSTLKEL--ARRWKPEILDGFTKQGTHQAMDD 163 Y L +K L ++ + +H+A D Sbjct: 160 YNGEIKYLDTLSLSRKNVKGLRNYKQNTVAEYFNLQNKNSHRAKSD 205 >UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSN1_AZOVD Length = 476 Score = 50.5 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 73/206 (35%), Gaps = 45/206 (21%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + W D E TG++P DR +++A + TD LN + + +D+ L + T Sbjct: 5 IFWYDYETTGINPRCDRPLQVAGIRTDEALNEIGAPLNLYCRPADDILPH-PAACLVTGI 63 Query: 68 ASGLVER---VKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD---------RRF 115 L+ +A + AELA G NS+ D R F Sbjct: 64 TPRLLAERGLCEAEFVTRLHAELAL---------PGTCTAGYNSLRFDDEISRHALYRNF 114 Query: 116 LFKYMPELEA-YFHYRYLDVSTLKELARRWKPEILDGFTKQG------------------ 156 Y E +A + +D L A +PE + ++G Sbjct: 115 FDPYAREWQAGNSRWDLID---LLRTAYALRPEGIHWPQEEGRVSLRLERLTAANGIEHG 171 Query: 157 -THQAMDDIRESVAELAYYREHFIKL 181 H A+ D+R ++A RE KL Sbjct: 172 QAHDALADVRATIALARLLRERQPKL 197 >UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group RepID=Q3B5G9_PELLD Length = 197 Score = 50.1 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 69/193 (35%), Gaps = 29/193 (15%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLN-ILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++W DLE TG+DP+R II+ A L A + ++AE I + + + Sbjct: 3 KVLWFDLETTGIDPDRHGIIQFAGL---AEIEGVVAESFEIKMQPHEGAMIE-----DEA 54 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVP----AGKSPICGNSIGQDRRFLFKYMP 121 SG AS EA A FL + V K G ++ D FL + Sbjct: 55 LAVSGFSREQIASFTPHAEAYKAIDGFLARHVSRFERNDKFYPAGYNVRFDLDFLSRMFR 114 Query: 122 ELEAY-----FHYRYLDVS---TLKELARRWKPEILD--------GFTKQGTHQAMDDIR 165 + Y ++R LD + E R G + H A+ DI+ Sbjct: 115 RYDQYGLGSFINWRSLDPQPILNIMEYMGRLSLPNHKLQTVCEHLGVRLENAHDALSDIK 174 Query: 166 ESVAELAYYREHF 178 + + EH Sbjct: 175 ATRELMELLMEHV 187 >UniRef50_B1VHF1 Putative exonuclease n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VHF1_CORU7 Length = 270 Score = 50.1 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +DLE TGL+P DR+IEIA ++T + +I+ + + + +G Sbjct: 94 VDLETTGLEPATDRVIEIA-VLTVEHGSIVGSFHCLLNPECSIPGESSN--------ING 144 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 L + A++ E L + + G+++ D FL L Sbjct: 145 LRDDDVANSPTFAEVAQELLPHVLNRT------LVGHNVKFDVGFLAAEYARL 191 >UniRef50_C8SCL6 DNA polymerase III, epsilon subunit n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SCL6_FERPL Length = 200 Score = 50.1 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 29/179 (16%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNIL-AEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D+E TGL+ ++D II IA + D L IL +E + ++ V+ H Sbjct: 9 VDVETTGLNVKKDEIISIAIIPMDG-LKILFSEAYYRILKPRRFKIDS-----VKYH--- 59 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 G+ R+ E + LE L + + I G SI D FL K E E F Sbjct: 60 GITPRMVEEAPTFCEVKEEILEKLNERI------IVGYSINLDIEFLKKSFKECEVVFEC 113 Query: 130 RYLDVSTLKELARRWKPEILDGF------TKQG-----THQAMDD--IRESVAELAYYR 175 +Y+D++ +++L R + + K G H A+ D I + ++ R Sbjct: 114 KYVDIADVEKLVGRLFGDYMKDVTLEDLAKKYGVDVAYRHSALSDAYITAQIFQMQLLR 172 >UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae RepID=Q2P315_XANOM Length = 481 Score = 50.1 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 15/119 (12%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQL----ALMDD 60 ++ ++ DLE G DP R RI + A + TDA L ++ E + V +D+ L A M Sbjct: 2 PDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMVT 61 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 H + + EA E + + + NSI D F+ Sbjct: 62 AITPQHA--------LREGVTEAEAFARIAEQMSR---PQTCTLGYNSIRFDDEFVRCG 109 >UniRef50_D2RB05 CRISPR-associated endoribonuclease Cas2 n=2 Tax=Gardnerella vaginalis RepID=D2RB05_GARVA Length = 359 Score = 50.1 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 64/180 (35%), Gaps = 31/180 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + N + ID E TGL+ + D+IIEI + + + + ++N Sbjct: 175 DKNFVVIDCETTGLNSKVDKIIEIGAV------KFIDGKIEEFQKLININCDSVSNFNKN 228 Query: 65 THTAS------GLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 + G+ + S + A + F+++ P+ G ++ D FL Sbjct: 229 NFIPNEIIELTGITSNMLESYGVRLDLALKEFINFVER------LPVLGYNVQFDMSFLN 282 Query: 118 KYMPELEAYFHY-----RYLDVSTLKELARRWKPEIL-------DGFTKQGTHQAMDDIR 165 + L+ F + + D+S + +++ + H+A+ D R Sbjct: 283 SALSSLDERFDHSLSINKIFDISRFVKKEKKFLKNYQLKTVLHEYNIAESVPHRALLDAR 342 >UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cellular organisms RepID=Q1LGD6_RALME Length = 530 Score = 49.3 bits (117), Expect = 5e-05, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 33/170 (19%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSD--EQLALMDDWNV 63 ++++DLE TG D +RDRI EI ++ GP + L + + Sbjct: 33 RPIVFVDLETTGADAQRDRITEIG---------VVEVGPDGIQEWDTLVDPLTSIPPFVQ 83 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ + + A E L+ G+ + N+ D FL Sbjct: 84 ---GLTGITDEMVRGQPTFALIAEALAEKLQ-----GRLFVAHNA-RFDYGFLKNEFRRA 134 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD 163 F DV L+R P + G T +G H+A+ D Sbjct: 135 GVTFR---ADVLCTLRLSRSLFPSVERHGLDALIARFGLTPKGRHRALAD 181 >UniRef50_D0WQJ6 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQJ6_9ACTO Length = 206 Score = 49.3 bits (117), Expect = 5e-05, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 59/174 (33%), Gaps = 27/174 (15%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +D+E TGL P RDRI+EI ++ D + E ++ L M V G Sbjct: 6 VDVETTGLSPVRDRIVEIGVVLLDESGEPEGEWQSLV-----NPLRGMGAVFVH-----G 55 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFH-Y 129 L + A + G++ + N+ D FL H Sbjct: 56 LTDADVADAPTLADLLPQIRGLFS-----GRALVAHNA-TFDVGFLNASFARAGYGMHVP 109 Query: 130 RYLDVSTLKELARRWKPEILDGFTKQGT---------HQAMDDIRESVAELAYY 174 R V T EL++ + P G H+A+ D + L +Y Sbjct: 110 REATVCT-MELSKIYLPPGRHGLAAAAERAGVATAKRHRALADAHTAAGLLRHY 162 >UniRef50_A9KR66 DNA polymerase III, epsilon subunit n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KR66_CLOPH Length = 235 Score = 49.3 bits (117), Expect = 6e-05, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 33/183 (18%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N + ID+E TGL PE+DRIIEIA + D E ++ + + Sbjct: 2 NFLAIDIESTGLSPEKDRIIEIAAIRYIDGKPK---ERFEKLINPGCPLPERITE----- 53 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ E + A M +RE L F AG+ + G+++ D F+ L+ Sbjct: 54 --LTGITEDMLAGAMTEREVIKEFLTF------AGEDVLLGHNVSVDFSFIKTAADRLKI 105 Query: 126 YFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVAELAYYR 175 + + +D L+R K ++ G ++ +H+A++D ++A Y+ Sbjct: 106 GYERQGIDT---LYLSRTLKSDLEKKNLESMCEHYGIIRECSHRALED---AIAAATLYQ 159 Query: 176 EHF 178 + + Sbjct: 160 KLY 162 >UniRef50_A6GP03 Exonuclease n=1 Tax=Limnobacter sp. MED105 RepID=A6GP03_9BURK Length = 244 Score = 49.3 bits (117), Expect = 6e-05, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIA--TLVTDANLNI---LAEGPTIAVHQSDEQLA 56 S N + + +D+E +GL+P++DR+I +A +V DA L + + + Q E + Sbjct: 31 SPNPDRWVVLDVESSGLNPKKDRLISVAATAIVFDAQRRPRISLTDTFEVVIKQPPEIVD 90 Query: 57 LMDDW 61 M ++ Sbjct: 91 -MIEF 94 >UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteobacteria RepID=Q1QT40_CHRSD Length = 495 Score = 49.3 bits (117), Expect = 6e-05, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 64/207 (30%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 +W D E G DP RDR + A + TD++ N + E T +D+ L H Sbjct: 10 FLWHDYETFGADPRRDRPAQFAAIRTDSDFNPVGEPMTFYCKPADDFLP---------HP 60 Query: 68 ASGLVERVKASTMGDREAELATLEFLK-------QWVPAGKSPICGNSIGQDRRFLFKYM 120 + + + + A L ++ + G + N++ D Sbjct: 61 -----QACLITGITPQAARRRGLAEIEFAARIHAEMSVPGTCSLGYNTLRFDD------- 108 Query: 121 PELEAYFHYRY-LDVST--LKELARRW------------KPEILDGFTKQ---------- 155 E+ + YR +D + + RW +P+ ++ T++ Sbjct: 109 -EVSRHLFYRNFIDPYSREWQNGNSRWDLIDVVRTYHALRPDGIEWPTREDGAPSFRLED 167 Query: 156 ----------GTHQAMDDIRESVAELA 172 G H A+ D+R ++ Sbjct: 168 LTAANGIEHAGAHDALADVRATIELAR 194 >UniRef50_C8WX41 Exonuclease RNase T and DNA polymerase III n=3 Tax=Bacteria RepID=C8WX41_ALIAD Length = 952 Score = 48.9 bits (116), Expect = 7e-05, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 63/175 (36%), Gaps = 41/175 (23%) Query: 8 LIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 I +DLE TGLDPER I+EI L V + + V + Sbjct: 3 WIIVDLETTGLDPERAEILEIGALRVRGGE---IVDTFHTLVRPERPIPDEIT------- 52 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK-----YMP 121 +GL + A +REA + F AG +P+ G+ +R FL +P Sbjct: 53 RLTGLSDADVAGAPSEREALMRFAGF------AGHTPMAGHHWVFERSFLLHRVARYGLP 106 Query: 122 ----------ELEAYFHYRYLDVSTLKE-LARRWKPEILDGFTKQGTHQAMDDIR 165 L R + S E LARR + +H+A+ D R Sbjct: 107 LQPGDGLCTLSLARILAPRLM--SHRLEYLARRL------RLRAEVSHRALADAR 153 >UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate division TM7 RepID=A5KSP8_9BACT Length = 476 Score = 48.9 bits (116), Expect = 8e-05, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 9/111 (8%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + DLE +GLDP RDRI++ A T +L+ + E I V +D+ L D V Sbjct: 9 FFFYDLETSGLDPRRDRIMQFAGQRTTMDLDPIGEPFNILVRLNDDVLPSPDAVMV---- 64 Query: 68 ASGLVERVKASTMGDREAELATLE-FLKQWVPAGKSPICGNSIGQDRRFLF 117 +G+ T + AE ++ F Q G + N+I D F+ Sbjct: 65 -TGIT---PQKTHEEGIAEAEFIKLFHNQVCTPGTVTVGFNNIRFDDEFIR 111 >UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAS5_PARDP Length = 659 Score = 48.9 bits (116), Expect = 8e-05, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 57/168 (33%), Gaps = 29/168 (17%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 D E TGLDP DRI++IA L + L E V H G Sbjct: 457 DTETTGLDPVADRIVQIAGLRIARGRLT--GERFDTLVDPGRPIPPAS----TAVH---G 507 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + + A A F + N+ D FL + +PE A+F + Sbjct: 508 ITDAMVAGAPDMTAA---LTAF--HHFAEDTVLVAHNA-PFDMGFLRRAVPETGAHFDNQ 561 Query: 131 YLDVSTLKELARRW---KPEILDGF--------TKQGTHQAMDDIRES 167 LD T+ A W P LD + H AM D R + Sbjct: 562 VLD--TVLLSAMLWGQSAPHSLDALTERLGIVIPPEARHTAMGDARAT 607 >UniRef50_Q3AAH9 Putative DNA polymerase III, epsilon subunit n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AAH9_CARHZ Length = 222 Score = 48.6 bits (115), Expect = 9e-05, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 59/163 (36%), Gaps = 25/163 (15%) Query: 11 IDLEMTGLDPER-DRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 IDLE TGL P + D II I + + + NI V+ E + R Sbjct: 41 IDLETTGLKPFQGDEIIAIGAVKIING--NITRPAFHAYVNPQREI----PEVVQRL--- 91 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE-AYF 127 +G+ + + L+F + S I G+S+ D FL K++ L Sbjct: 92 TGISPKTVQNAPPLTNTLTTLLDFARN------SVIVGHSVNFDLAFLNKHLSSLTGKKL 145 Query: 128 HYRYLDVS--TLKELARRWKPEILDGFTK-----QGTHQAMDD 163 R LD + R + + K QG H A+ D Sbjct: 146 TPRLLDTVDLGIYLFPREPNYSLENFAQKFAISLQGRHTALGD 188 >UniRef50_A7HNS3 DNA polymerase III, alpha subunit n=2 Tax=Thermotogaceae RepID=A7HNS3_FERNB Length = 1390 Score = 48.6 bits (115), Expect = 9e-05, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 26/164 (15%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +DLE TGL+P D I+EI + T + ++ E T + N ++ +G Sbjct: 386 LDLETTGLNPRSDEIMEIGAVKT-RDGKVIDEFHTFV---------RPNKLNKKSLNITG 435 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + E + + LEF+K + + N+ D FL + + F+ Sbjct: 436 ITEDMLKDAPDIMQVLPKLLEFIKDSI-----LVAHNA-DFDMTFLKNILSKSGIEFNPP 489 Query: 131 YLDVSTLKELARRWKPEILDGFTKQGT---------HQAMDDIR 165 Y+D L + R K H+A+DD R Sbjct: 490 YIDTLRLSQALLR-NKIKSFSLDKLVDHFGLGAFQHHRALDDAR 532 >UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (Modular protein) n=2 Tax=Burkholderiales RepID=B3R8V7_CUPTR Length = 532 Score = 48.6 bits (115), Expect = 9e-05, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 33/174 (18%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD-- 59 +A ++++DLE TG D +RDRI EI ++ GP V M Sbjct: 27 AALSRPIVFVDLETTGADAQRDRITEIG---------VVEVGPDGIVEWETLLDPGMSIP 77 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 + R +G+ + + + E L+ G+ + N+ D FL Sbjct: 78 PFIQRM---TGISDDMVRGQPTFESLAESLAERLQ-----GRLFVAHNA-RFDYGFLKNA 128 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD 163 F DV L+R P + G T +G H+A+ D Sbjct: 129 FRRAGVTFR---ADVLCTVRLSRSLFPSVERHGLDALIARFGLTPKGRHRALAD 179 >UniRef50_C4Z427 DNA polymerase n=2 Tax=Bacteria RepID=C4Z427_EUBE2 Length = 233 Score = 48.6 bits (115), Expect = 9e-05, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 34/171 (19%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N + +D+E TGL+P DRIIE+ V D + + + V+ + + Sbjct: 3 NRYVALDIETTGLNPAVDRIIEVGMARVEDGQ---ITQKYSTLVYPGISVSERITE---- 55 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + EF+ W P+ G+++ D FL K + Sbjct: 56 ---LTGIHNEELTGKPRIEDIIGEITEFIGDW------PVLGHNVIFDFSFLKKA--AVN 104 Query: 125 AYFHYRYLD--VSTLKELARRWKPEILDG----------FTKQGTHQAMDD 163 D + TLK LARR PE+ +H+A DD Sbjct: 105 NGL--TINDDGIDTLK-LARRILPEVEHKSLSFLCQYFNIDPGRSHRAYDD 152 >UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7J4_NATTJ Length = 864 Score = 48.2 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 39/184 (21%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV- 63 +N L+ D+E TGLD +D IIE+A L + ++ E E L Sbjct: 497 QNKLVVFDVETTGLDTTKDEIIELAALKAGKD-GVVDEFH--------EYLRNSKPVGES 547 Query: 64 -RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 + H S + + ++ + F+ + G+++ D + + Sbjct: 548 FQVHGIS--DQVLLEQGKPPEKSLASFTNFID------DCDLVGHNVNYDITMVENQCKK 599 Query: 123 LEAY---FH-YRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESV 168 L H Y +D+S RR+ P + + + TH+AMDD+ + Sbjct: 600 LLNQDLELHGYDTVDIS------RRYFPRLEKYNLESLCEDLQISSKPTHRAMDDVEATF 653 Query: 169 AELA 172 L Sbjct: 654 ELLQ 657 >UniRef50_C0ECE2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECE2_9CLOT Length = 865 Score = 48.2 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 39/178 (21%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 N++ D+E TG D D II+IA + D +L + + + + H Sbjct: 498 NVVVFDVESTGTDTSSDEIIQIAAVRIDETGRVLRSFEQLLH--PSKPVGQSEAV---HH 552 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL--- 123 + L+ + F++ + + G+++G D L + L Sbjct: 553 FSDALLAE---RGGEPPQVLAEFCSFVR------GAVVVGHNVGFDLTILASELSRLGLP 603 Query: 124 ----EAYFHYRYLDVSTLKELARRWKPEI----LDGFTK------QGTHQAMDDIRES 167 E Y Y LD LARR+ P++ L+ +K + +H AMDDI + Sbjct: 604 PAEYEEY--YDTLD------LARRFYPDLPNHKLETLSKLLDTEVKSSHDAMDDILAT 653 >UniRef50_Q2RJC1 DNA polymerase III, epsilon subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJC1_MOOTA Length = 921 Score = 47.8 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 35/167 (20%) Query: 11 IDLEMTGLDPERDRIIEIATL------VTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 +D+E TGLDP RDRIIEIA + +T ++ G + + E+L Sbjct: 9 LDVETTGLDPARDRIIEIAAVRLEGGNITRQFQTLVNPGRP--IPPAIERL--------- 57 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK------ 118 +G+ + + E L+ + +P G + D FL + Sbjct: 58 ----TGISDAMVREAPPLPEVLPGLLDLFRDAIPVGHNG------TFDLAFLNQALGHGW 107 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIR 165 + P L+ R L R G H+A+DD+ Sbjct: 108 HSPLLDTLALSRILFP--CLASHRLDYMSKYLTLEATGHHRALDDVL 152 >UniRef50_B0MME8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MME8_9FIRM Length = 1605 Score = 47.8 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 26/168 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANL--NILAEGPTIAVHQSDEQLALMDDWN 62 E+++I D+E TGL P +RI EI + L + E + V+ M Sbjct: 588 EDDIIVFDIETTGLHPANERITEIGAV----KLRNMEIVERFSTFVNP-------MMPIP 636 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 +G+ + + A + A + F G SP+C ++ D F+ Sbjct: 637 SNITELTGITDDMVADAPTEDVAVSDFMAF------CGNSPVCAHNAKFDVSFIRSAAAR 690 Query: 123 LEAYFHYRYLDVSTLKELA----RRWKPEILDGFTKQGT---HQAMDD 163 +E F +D ++ + A + +K + + + K G H+A+ D Sbjct: 691 MEKSFDNPVVDTLSIAKAALKGIKNYKLDTIAKYFKLGDFDHHRAVAD 738 >UniRef50_A9BIM3 DNA polymerase III, alpha subunit n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIM3_PETMO Length = 1388 Score = 47.8 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 24/168 (14%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +E + DLE TGL+P + IIEI + N+ I+++ V ++ Sbjct: 378 SETEFVVFDLETTGLEPAMNEIIEIGAVKI-KNMKIVSK-FHRLVKPRKPVSNFTSNF-- 433 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ ++ E L F++ G + N+I D RF+ +++ + Sbjct: 434 -----TGITNQMLEVEKPIEEVLPQFLSFIE-----GAVLVAHNAI-FDYRFIREWVRRV 482 Query: 124 -EAYFHYRYLDV----STLKELARRWKPEILDGFTKQGT---HQAMDD 163 +F Y+D +L L ++++ K G+ H+A +D Sbjct: 483 YNEHFEQTYIDTVALSKSLLTLKSYGLAKVVEEL-KLGSFEHHRAHED 529 >UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xanthomonas albilineans RepID=D2UDX2_XANAL Length = 492 Score = 47.8 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 73/205 (35%), Gaps = 42/205 (20%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 + ++ ++ DLE G DP R RI + A + TDA LN + E + V +D+ L Sbjct: 12 ATMPDSFLFYDLETFGADPRRTRIAQFAAVRTDAALNQIEEPISFFVQPADDLLP--SPV 69 Query: 62 NVRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 +G+ ++ + + +A E Q + NS+ D F+ Sbjct: 70 ATLI---TGITPQQALREGINEADAFARIAE---QMAQPQTCTLGYNSLRFDDEFIRH-- 121 Query: 121 PELEAYFH--YR-----------YLDVSTLKELARR----W-------------KPEILD 150 L FH Y LD+ L R W + + + Sbjct: 122 -GLFRNFHDPYEREWRGGNSRWDLLDMLRLMHALRPDGIVWPQREDGATSFKLEQLALAN 180 Query: 151 GFTKQGTHQAMDDIRESVAELAYYR 175 G H+A+ D+ ++ ++R Sbjct: 181 GVRDGDAHEALSDVYATIGMARHFR 205 >UniRef50_A9VVI2 Exonuclease RNase T and DNA polymerase III n=1 Tax=Bacillus weihenstephanensis KBAB4 RepID=A9VVI2_BACWK Length = 271 Score = 47.8 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 40/175 (22%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIA-VHQSDEQLALMDDWNVRTHTASG 70 DLE TGLD + ++++EIA + TD L + +++ + + D + Sbjct: 18 DLETTGLDYKNEQVVEIAAIRTDLE-QELGRMHILVKLNEGKKLPDFLVD-------NTD 69 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIG------QDRRFLFKYMPELE 124 L + + + M + +A + + F+ GNSI D +LFK + E Sbjct: 70 LRDYMLVNGMVEHQALINLMAFM------------GNSIVVAHYAPFDFAYLFKALIAPE 117 Query: 125 AYFHYRYL------DVS-TLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELA 172 + R + D S +L A R G +G H+AM+DI ++ L Sbjct: 118 LFLCTRSIERLLTPDKSASLAPTAER------RGVKLEGAHRAMNDIEATIGVLK 166 >UniRef50_Q89MS5 Blr4117 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89MS5_BRAJA Length = 223 Score = 47.8 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 14/134 (10%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A ++ + ID E TGL+ D ++ IA + N + + VH E A Sbjct: 27 APDDEFVVIDCETTGLNVRTDNVVAIAAIKIRGNRILTSARFEAIVHPDSELEAE----A 82 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY-MP 121 ++ H R++ S + L ++ P+ G + D L KY +P Sbjct: 83 IKIH-------RLRRSDVEASPIVWKVLPGFLHFIGPR--PLIGYYVDFDIAMLDKYILP 133 Query: 122 ELEAYFHYRYLDVS 135 + ++VS Sbjct: 134 LVGIELPNERIEVS 147 >UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Deinococcus RepID=Q1IXC1_DEIGD Length = 180 Score = 47.8 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 41/181 (22%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALM-DDW-NV 63 N++ DLE TGL PERD I+EI L V D + + +E V + ++ W Sbjct: 2 NVVVFDLETTGLSPERDAIVEIGALRVVDGRV-VESERFETLVRPQNAAGEVVPIPWRAQ 60 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK----- 118 R H S + + + L+F+ G+S + ++IG D F+ Sbjct: 61 RVHGIS---DAMVQDAPELGQVLPEFLDFV------GRSAVAAHNIGFDSSFMRAAARRC 111 Query: 119 ---YMP-------ELEAYFHYR----YLDVSTLKELARRWKPEILDGFTKQGTHQAMDDI 164 + P +L R LDV LA+R + F G H+++ D+ Sbjct: 112 GLVWAPPAEYCTVQLSRRAFPRERTHNLDV-----LAQR----LGLSFAPGGRHRSLGDV 162 Query: 165 R 165 + Sbjct: 163 Q 163 >UniRef50_B6FWT9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWT9_9CLOT Length = 276 Score = 47.8 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 15/112 (13%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGL 71 DLE TGL+ ++ I EIA + D + + E V+ + + D +G+ Sbjct: 100 DLETTGLEAHKEAITEIAAIKFDYD-EPV-EYFHTYVNPKKKIREKITD-------LTGI 150 Query: 72 VERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + AS L+F+ ++ + I N + D F+ M L Sbjct: 151 TNEMVASAPPIEYVLPNFLKFIDKY-----TLISHN-VSFDMSFILDPMYNL 196 >UniRef50_O67074 DNA polymerase III subunit epsilon n=3 Tax=Aquificaceae RepID=DPO3E_AQUAE Length = 202 Score = 47.4 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 27/169 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + IDLE TG D E+ +I++A + + I+ E + V+ + Sbjct: 16 DGTFVVIDLEATGFDVEKSEVIDLAAVRVEGG--IITEKFSTLVYPGYFIPERIK----- 68 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + E LEF+ G + + G+ + QD +F+ KY + Sbjct: 69 --KLTGITNAMLVGQPTIEEVLPEFLEFV------GDNIVVGHFVEQDIKFINKYTKQYR 120 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQ----------GTHQAMDD 163 +R + TLK LAR+ P + K+ G H+A+ D Sbjct: 121 GK-KFRNPSLCTLK-LARKVFPGLKKYSLKEIAENFGFETNGVHRALKD 167 >UniRef50_Q482N7 DNA polymerase III, epsilon subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q482N7_COLP3 Length = 256 Score = 47.4 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 15/123 (12%) Query: 2 SANENNLIWIDLEMTGLDP-ERDRIIEIATL-VTDANLNILAEGPTIAVHQSDE--QLAL 57 S + LI +D E TG++P E RI+EI + + + L + D+ Q+ Sbjct: 10 SEKDKRLIILDTETTGINPREGHRIVEIGCVEMINRQLT--GRTYHAYIKPLDQRGQVFQ 67 Query: 58 MDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 M+ + H GL A + ++F++ G + NS D F+ Sbjct: 68 MEQEVINIH---GLTNEFLADKPIFSQVVHEFIDFIR-----GAELVIHNS-KFDVGFMD 118 Query: 118 KYM 120 Sbjct: 119 HEF 121 >UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacteria RepID=B6J811_COXB1 Length = 458 Score = 47.4 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 75/196 (38%), Gaps = 34/196 (17%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS + ++ DLE TGL+ D+II+ A + TD LN L I + + + + Sbjct: 1 MSNHRKTYLFYDLETTGLNKCFDQIIQFAAIRTDEALNELN-RHEILIRLNPDVIPS--- 56 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFKY 119 + ++ R M +AE+ + + Q V + G N++G D FL Sbjct: 57 ------PEAMIIHRFSIDQMLSGKAEIEAIREIHQSVNTPGTISVGYNTLGFDDEFLRFS 110 Query: 120 MPE--LEAYFH-YRY----LDVSTLKELARRWKPEIL----------DGFTKQG------ 156 L Y H Y +D+ L L +KP L + +K Sbjct: 111 FYRNLLPPYTHQYDNFCGRMDLYPLTILYYLFKPNALNWPDPFDLKLENLSKANQLAEGQ 170 Query: 157 THQAMDDIRESVAELA 172 H AM D+ SVA Sbjct: 171 AHNAMVDVEASVALAK 186 >UniRef50_Q0FXM2 Exonuclease, DNA polymerase III, epsilon subunit family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXM2_9RHIZ Length = 466 Score = 47.0 bits (111), Expect = 3e-04, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 61/172 (35%), Gaps = 26/172 (15%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 D E TGL P RD I++I + + D L + E V + H G Sbjct: 278 DTETTGLIPHRDEIVQIGAIRIVDGKL-VEGETFDTLVDPGGPIPRASS----KIH---G 329 Query: 71 LVERVKASTMGDREAELATLEFLKQWV-PAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 + +++ EA EF K+ V A +P D FL ++ + F + Sbjct: 330 ITDKMVMGQPRIAEAGRRFFEFSKESVLVAHNAP-------FDMSFLRRHEKAMGVAFDH 382 Query: 130 RYLD---VSTL--KELARRWKPEILDGF----TKQGTHQAMDDIRESVAELA 172 +D VS + R + + K+ H A+ D R + + Sbjct: 383 PIVDTVLVSAIIFGTTERHMLDVVCERLGIRIEKKDRHTALGDARVTAEAMK 434 >UniRef50_C9RRP7 DNA polymerase III, epsilon subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP7_FIBSS Length = 905 Score = 47.0 bits (111), Expect = 3e-04, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 22/164 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TGLD E+D IIE+A + + E V S +L + T Sbjct: 7 FVALDLETTGLDFEKDEIIEVALVRFENG--EPKENLDFLVKPSAVELRPFIE------T 58 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL-EAY 126 +G+ + S F+ + N++ D +FL + ++ +Y Sbjct: 59 LTGISKADLESASDFATIAGQICSFV-----GDLPIVAHNAV-FDSKFLKQTFTKVGISY 112 Query: 127 FHYRYLDVSTLKELARRWKPEIL-------DGFTKQGTHQAMDD 163 + + D TL +A + P + H+A+ D Sbjct: 113 DSHVFWDSLTLSRIAFQDVPNHRLDTLVQELNIERSRAHRALPD 156 >UniRef50_C1AA06 Exonuclease n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA06_GEMAT Length = 323 Score = 47.0 bits (111), Expect = 3e-04, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 13/116 (11%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD-DWNVRTHTAS 69 +D+E TGLD RD IIE + D + EG VH + Sbjct: 52 VDVETTGLDTARDVIIEFGAVPFDFD----GEGRVYTVHPPLSYFEDPGRPIPAEASAIT 107 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 G+ + D A LA L+ I N+ G DRR L + +P A Sbjct: 108 GITDDDVRGKRIDDAAVLAALD-------QAVLVIAHNA-GFDRRMLERRLPAFAA 155 >UniRef50_A8ES54 DNA polymerase III, epsilon subunit n=4 Tax=Epsilonproteobacteria RepID=A8ES54_ARCB4 Length = 203 Score = 47.0 bits (111), Expect = 3e-04, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 14/137 (10%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 + +N + +D E TGL+P++D I+ I ++ N ++ + I + S + Sbjct: 25 TPPQNEYVSLDCETTGLNPKKDEILSIGAVLIKDNKILMRKTFNIFLKPSKDINIES--- 81 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 H L + + L+F+ G PI G I D + KY Sbjct: 82 IKVHH----LRQIDLNDALEPEIGIYQLLDFI------GSRPIVGYYIEFDMAIISKYTK 131 Query: 122 E-LEAYFHYRYLDVSTL 137 + L ++VS++ Sbjct: 132 KYLGIKLPNTPIEVSSI 148 >UniRef50_UPI000185C08E DNA polymerase III epsilon subunit n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C08E Length = 195 Score = 46.6 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 21/142 (14%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ + +D+E TGLDP +D+++ I + + +L E + + E+++ Sbjct: 17 RDDAWLAVDVETTGLDPSKDQLLSIGWVAVEGRDIVLEESGHLIIRPEREEVS-----VG 71 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRR---FLFKYM 120 + T GL + + A+ + A LE L+ G+ + R FL Sbjct: 72 ESATVHGLTDDMVATGVEAEVAVGKLLEALR-----GRKLLA----HYARMEVGFLD--- 119 Query: 121 PELEAYFHYRYLDVSTLKELAR 142 P YF R DV + R Sbjct: 120 PLCRKYFDAR-FDVPVADTMTR 140 >UniRef50_B9KXZ3 Exonuclease family n=2 Tax=Thermomicrobia (class) RepID=B9KXZ3_THERP Length = 982 Score = 46.6 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 60/172 (34%), Gaps = 48/172 (27%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +D+E TG+DPERD IIE+A + + E V + + +G Sbjct: 8 LDIEATGMDPERDEIIEVAAIKFREE--EVLERFETLVQPRR-------PVPLAVASLTG 58 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY----------- 119 L R ++ +F++ + PI G S D + L + Sbjct: 59 LTMRDLRRAPSFQQIAPRLRQFVRNY------PIVGQSPDYDLQMLSAHGLELRNPVYDT 112 Query: 120 -------MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDI 164 +P+L AY +L +A R + H+AM D+ Sbjct: 113 FRLATILLPDLPAY---------SLAGIAARLGISVAQQ------HRAMADV 149 >UniRef50_C1CX37 Putative DNA-directed DNA polymerase (DNA polymerase III, epsilon subunit) n=1 Tax=Deinococcus deserti VCD115 RepID=C1CX37_DEIDV Length = 202 Score = 46.6 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 13/120 (10%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLAL-MDDW-NV 63 N++ DLE TGL PERD I+EI L V + ++ V ++ M W Sbjct: 2 NVVVFDLETTGLSPERDGIVEIGALRVVNGQVHE-HLRYETLVRPTNAAGERLMIPWHAQ 60 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 R H S + S E LEF+ + + N +G D F+ L Sbjct: 61 RVHGIS---NEMVRSAPTIEEVLPEFLEFV-----GDSAVVAHN-VGFDCGFMRAQARRL 111 >UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKT0_9SPHI Length = 245 Score = 46.2 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 41/182 (22%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATL--VTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + +++ DLE TG D DRI++IA + D + E Sbjct: 4 KKPIVFFDLETTGTDTLNDRIVQIAIIKLAADGTKVEKERLINPTIPIPPE--------V 55 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFKYMP 121 + H S + + + + EF++ + G N + D MP Sbjct: 56 TKVHGVS---DEMVKDAPTFHQVAKSLFEFIR------GCDLAGYNHLNFD-------MP 99 Query: 122 ELEAYFHYRYL-----DVSTL--KELARRWKPEILDG-----FTK--QGTHQAMDDIRES 167 L F + DV + ++ + P L K + H AM D + + Sbjct: 100 LLIEEFARAGVVFPEPDVQYIDVMKVYYHFHPRTLSAAYQLYCHKELENAHNAMADTQAT 159 Query: 168 VA 169 + Sbjct: 160 LE 161 >UniRef50_UPI000185C525 DNA polymerase III, epsilon subunit n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C525 Length = 529 Score = 46.2 bits (109), Expect = 5e-04, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 61/188 (32%), Gaps = 39/188 (20%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNI------LAEGPTIAVHQSDEQLALMDDW 61 + +DLE TGL + D IIEI + T I + G I H + Sbjct: 23 FVVVDLETTGLKAKNDHIIEIGAIKTRGGKTIGTFSSFIDPGMEIPDHIT---------- 72 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY-- 119 + +G+ + LEF + G + N+ D FL + Sbjct: 73 -----SLTGITTADVETAPQLGTVITQFLEFAR-----GSVWVAHNA-KFDIGFLRQACT 121 Query: 120 -------MPELEAYFH--YRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAE 170 P + R LD S + + + G + H+A+DD +V Sbjct: 122 DLGLDWPSPSVVDTLTLARRVLDRSQVGS-FKLSQLARYVGSPNRPAHRALDDAIATVDV 180 Query: 171 LAYYREHF 178 L Y E Sbjct: 181 LHYLMERL 188 >UniRef50_B4WXR6 Exonuclease superfamily n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXR6_9GAMM Length = 215 Score = 46.2 bits (109), Expect = 5e-04, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 26/166 (15%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 ID E TGLD ++ IA +V + ++G + + D +R H Sbjct: 48 IDCETTGLDSRTAELVSIAAVVIKDGRVLSSQGLDVKLMPPDSLKED----TIRIHR--- 100 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY-FHY 129 L R+A A L + G P+ G + D + +Y+ L + Sbjct: 101 LRPVDLEGGESVRDALDALLALV------GNRPLVGWCVAFDVAMINRYLRPLMGFDLPN 154 Query: 130 RYLDVSTL-KELARRWKPEILD-----------GFTKQGTHQAMDD 163 +++S L ++ R W+P++ H A D Sbjct: 155 DIIELSALYQKKMRYWQPDVTPDLRFDAMASALQVPVMERHTARGD 200 >UniRef50_A9F4T5 DNA polymerase III, epsilon subunit n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F4T5_SORC5 Length = 258 Score = 46.2 bits (109), Expect = 5e-04, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 52/175 (29%), Gaps = 31/175 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + ++D+E TG DP DRIIE+ ++ + +H A Sbjct: 42 DQPIAFVDVETTGRDPAGDRIIELGIVI--GRSGEILTRYNWLIHPGRPIPAES----TA 95 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM---- 120 H G+ + E L K G P N+ DR FL + Sbjct: 96 IH---GIKDADVEGKPSFAEVAEEILGCFK-----GAIPAAYNA-TFDRSFLLAELERVG 146 Query: 121 --PELEAYFHYRYLDVSTLKELARRWKPEILDGF----------TKQGTHQAMDD 163 P R +D AR + + H+A DD Sbjct: 147 MRPREPPPAMRREVDWVDPLTFARELYKNEESRALGDMAARLGISLEKAHRATDD 201 >UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus capsulatus RepID=Q605A2_METCA Length = 478 Score = 45.9 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 67/207 (32%), Gaps = 64/207 (30%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 W DLE G DP RDRI + A L TD N + + SD+ M + Sbjct: 7 FYWYDLETFGTDPARDRIAQFAGLRTDLEFNPIGPPDVLYCRPSDD----MVPYP----- 57 Query: 68 ASGLVERVKASTMGDREA------ELATLEFLKQ-WVPAGKSPICGNSIGQDRRFLFKYM 120 + + + + A E A + + + ++ G + N++ D L Sbjct: 58 -----DACLVTGITPQYAAELGVPESAFIATIHRIFMRPGTCVLGYNTLRFDDEMLR--- 109 Query: 121 PELEAYFHYRYL---------------DVSTLKELARRWKPE------------------ 147 + YR L DV L L + +P+ Sbjct: 110 -----HAFYRNLYDPYAREWKGGNSRWDVIDLARLTQALRPDGIEWPRDSLGSPVFKLER 164 Query: 148 --ILDGFTKQGTHQAMDDIRESVAELA 172 +G + H A+ D+R +VA Sbjct: 165 LAAANGIRHESAHDALSDVRATVAFAR 191 >UniRef50_Q03C57 3'-5' exonuclease and CRISPR-associated protein cas2 n=3 Tax=Lactobacillus RepID=Q03C57_LACC3 Length = 301 Score = 45.9 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 16/111 (14%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + +D+E TGLD ERD II I V ++N + T+ L Sbjct: 129 PFVALDIETTGLDAERDAIIAIGA-VKGPSVNETEKFTTLVN--PRRPL------PSTVA 179 Query: 67 TASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL 116 +GL E + A+ + EA A +F G P+ G ++ D FL Sbjct: 180 KLTGLSAEELVANGISLSEAVQALRDF------TGSLPLVGYNLRFDMGFL 224 >UniRef50_C2D7T6 3'-5' exonuclease and CRISPR-associated Cas2 family protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7T6_9ACTN Length = 337 Score = 45.9 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 26/170 (15%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 ++ + +D+E +GL+ D+IIEI + + D + + + S + Sbjct: 166 SDKKFVILDIETSGLNETDDKIIEIGAIRICDKQ---VDDYQCLIKRDSLNLSPAITQ-- 220 Query: 63 VRTHTASGLVE-RVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 +GL + + + A +F+ G P+ G +I D RF+ + Sbjct: 221 -----LTGLTDIELANRGVNPNLALNGLKQFI------GHLPVLGYNIAFDMRFINNELR 269 Query: 122 EL-EAYFHYRYLDV-------STLKELARRWKPEILDGFTKQGTHQAMDD 163 + E R +DV E + G + H+A+ D Sbjct: 270 SMNEELLDNREIDVMRFIKKEKMFLESYALDNVLKVYGISATVPHRALGD 319 >UniRef50_A6P0N2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0N2_9BACE Length = 1390 Score = 45.9 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 56/164 (34%), Gaps = 32/164 (19%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLN--ILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 D+E TGLD RD IIEI ++ L +AE V + + + Sbjct: 373 DIETTGLDNRRDVIIEIGAVI----LRNGEIAETFDTFVSPGRPLSREIVE-------LT 421 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 + +++ EA A LEF AG P+ ++ D F+ + F Sbjct: 422 SITDKMLEGAPSQEEAIRAFLEF------AGDRPLAAHNAEFDMGFIAEGCRRYGIPFEK 475 Query: 130 RYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD 163 +D LA+ P++ H+A D Sbjct: 476 TSIDT---LILAQNLLPDLGKYKLDIVAEHLRLPPFKHHRADAD 516 >UniRef50_P96171 DNA for Na+/glucose symporter, n=1 Tax=Vibrio parahaemolyticus RepID=P96171_VIBPA Length = 234 Score = 45.9 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 14/110 (12%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D E TG +PE DR+I I + + ++N+ + + H D + H Sbjct: 51 LDFETTGFNPEVDRVISIGWVEIRNSNIRLNSARHVFINHAIDIC----HESVKVHHIRP 106 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 E + S + ++ A L+ + AGK + I ++RFL +Y Sbjct: 107 ---ETLHVSGISEQAAFTQLLDVI-----AGKILVAHGCI-MEQRFLEQY 147 >UniRef50_A1VJH5 Exonuclease, RNase T and DNA polymerase III n=8 Tax=Proteobacteria RepID=A1VJH5_POLNA Length = 220 Score = 45.9 bits (108), Expect = 6e-04, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 13/136 (9%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A EN + +D E TGL+ D II I + N + +E + V +L + Sbjct: 37 APENEWVALDCETTGLNTRTDDIIAIGAVRIRDNRIMTSERLELLVRPEKRRL--SAESV 94 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK-YMP 121 L E+ A + EA + + F+ G P+ G + D + + P Sbjct: 95 RVHR----LREQDVAQGISADEAMMKLMYFI------GSRPLVGYYLEFDLAMINRVLFP 144 Query: 122 ELEAYFHYRYLDVSTL 137 L ++VS++ Sbjct: 145 MLGMGLPQPKIEVSSM 160 >UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha H16 RepID=Q0JYK3_RALEH Length = 220 Score = 45.9 bits (108), Expect = 7e-04, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 40/180 (22%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ + D+E TGLD ER I+EI + + N N + + V S + + + Sbjct: 45 LAHLPERFVVFDIETTGLDSERHEILEIGAIRVNRNSNN-HDTFQVLVKPSRKVPKKITE 103 Query: 61 WNVRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGN------SIGQDR 113 +G+ E ++A + A +F GN + D Sbjct: 104 -------LTGITPEMIEAEGVSLESAVQDFAKF------------AGNLRLVSFNAEFDM 144 Query: 114 RFLFKYMPELEAYFHYRYLDVSTLKELARRWKPE----ILDGFTKQGT------HQAMDD 163 F+ K + F VS +++RR P+ L K G H+A+ D Sbjct: 145 AFISKAAGKSSITF---ANPVSCALKMSRRAWPDRKSYRLAEIAKDGNLDTSDMHRALGD 201 >UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria RepID=B3PLL7_CELJU Length = 497 Score = 45.5 bits (107), Expect = 7e-04, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 75/217 (34%), Gaps = 51/217 (23%) Query: 1 MSANEN-NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 M++ E L W D E G P DR ++ A + TD +LNIL E TI + + L Sbjct: 1 MTSTEQITLYWHDYETWGESPAIDRPVQFAGVRTDLDLNILGEPLTIYARPAPDVLPK-- 58 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATL---EFL----KQWVPAGKSPICGNSIGQD 112 E + + +EAE + +F+ ++ G + NSI D Sbjct: 59 ------------PEACLITGITPQEAEAKGVSEADFIAAIHRELARPGTCGVGYNSIRFD 106 Query: 113 ---------RRFLFKYMPELEA-YFHYRYLDVSTLKELAR----RWKPEILDGFT----- 153 R F Y E + +DV + R W P+ DG Sbjct: 107 DEVTRYTLYRNFYDPYEREWRNGNSRWDLIDVLRMTRALRPEGIHW-PDYEDGTPCFKLE 165 Query: 154 ---------KQGTHQAMDDIRESVAELAYYREHFIKL 181 + H A+ D+ ++A + KL Sbjct: 166 RLTEVNRISHEAAHDALSDVHATIAMARLLKSRQPKL 202 >UniRef50_Q9ZX22 Gp57 n=2 Tax=unclassified Siphoviridae RepID=Q9ZX22_BPMT4 Length = 177 Score = 45.5 bits (107), Expect = 7e-04, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 29/135 (21%) Query: 8 LIWIDLEMTGLDPERDRIIEIAT--LVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 L+ +D E TGL + I+E+A + T A L + EQLA ++ Sbjct: 5 LVVVDCETTGL-HDGAAILEVAAVNIDTGAEL-------HFVPFVTREQLAQAQPMAMQM 56 Query: 66 --HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIG-----QDRRFLFK 118 + G+ +R + S A + GN+ G D R L Sbjct: 57 NRYYERGIWQR-RLSPDSTDAAYWKLANM-----------LAGNTFGGSNPAFDSRLLAA 104 Query: 119 YMPELEAYFHYRYLD 133 MP+ +H+R D Sbjct: 105 AMPDGAPEWHHRLAD 119 >UniRef50_Q0RM97 Putative DNA-directed DNA polymerase n=1 Tax=Frankia alni ACN14a RepID=Q0RM97_FRAAA Length = 238 Score = 45.5 bits (107), Expect = 8e-04, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 14/119 (11%) Query: 8 LIWIDLEMTGL-DPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 L+ IDLE TG D +++ I+EIA + A +AE T ++ A W Sbjct: 34 LVAIDLEGTGAQDGDQEDILEIALVPLHAGAMQIAESYTTVINPGRRIAAR--PWLSP-- 89 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 GL +V A + E L + G+++G D R L + P + Sbjct: 90 ---GLTNQVLAGSPPLGRVEPELAARL------NGRILVGHNVGVDWRLLHRRCPTVTP 139 >UniRef50_A7HHL1 Exonuclease RNase T and DNA polymerase III n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HHL1_ANADF Length = 238 Score = 45.5 bits (107), Expect = 8e-04, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 14/107 (13%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D EMTGLDP RD I+ I + + + + ++AE ++ + H Sbjct: 50 LDCEMTGLDPARDEILSIGAVRIRNGRI-VMAERFYQVFKPTEAVSPKE---VILIH--- 102 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL 116 GL + + +A L F+ G S + G+ D FL Sbjct: 103 GLGPDEVSRGLPLGDALERLLAFI------GDSVVIGHFTSVDLSFL 143 >UniRef50_B0UN90 Exonuclease RNase T and DNA polymerase III n=3 Tax=Rhizobiales RepID=B0UN90_METS4 Length = 223 Score = 45.1 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 33/170 (19%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +D E TGLDP RD I+ +A + + + +E V ++ H Sbjct: 34 LDCETTGLDPRRDEIVAVAAIRIRGDRILTSESLRATVRSDR----PSSPEAIKVHRL-- 87 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 L ++ + A L F+ G PI G D R L K + F R Sbjct: 88 LNAEIREAE-PLDAVLPALLRFI------GGRPIVGYYTEFDVRMLDK---SVRRQFGIR 137 Query: 131 Y----LDVSTLKELAR-RWKPEILD------------GFTKQGTHQAMDD 163 +DVS+L A+ R P+ + G H A +D Sbjct: 138 LPNPRIDVSSLYHAAKYRDAPDYVKIDLSFARILEDLGLPALPQHDAFND 187 >UniRef50_C2CW51 DNA polymerase III n=2 Tax=Bacteria RepID=C2CW51_GARVA Length = 307 Score = 45.1 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 32/163 (19%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D E TGL D IIEI L V + N + + + S E + + Sbjct: 25 LDTETTGLSAYYDEIIEIGILRVRN---NEIVDRYDQLIKPSIEVDGFIT-------ALT 74 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 G+ + + L F+ + + I G++ D RFL + + Sbjct: 75 GITNDMLEDMPSISSVKNDVLSFISEDI------ILGHNTSFDMRFLNEGF---KEQLSN 125 Query: 130 RYLDVSTLKELARRWKPEILDGF---------TKQGTHQAMDD 163 +Y+D + AR+ PE+ H+A+ D Sbjct: 126 QYMDT---MQFARKLYPELKHHRLSDLTDYLGLHNNEHRALAD 165 >UniRef50_C0EF57 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EF57_9CLOT Length = 319 Score = 45.1 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 17/107 (15%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 IDLE TG DP RD IIE+ L + + + E + + DD+ ++ + Sbjct: 25 IDLETTGYDPHRDEIIELGALRIHEGE---VVESFSSLTKPQRDL----DDYIIQL---T 74 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL 116 G+ + AS + L+F+ G S + G+++ D F+ Sbjct: 75 GISNEMLASAPELSDVFPRYLDFI------GDSIVVGHNVHFDVNFI 115 >UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z9I3_9GAMM Length = 483 Score = 45.1 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 51/207 (24%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS++E+ W D E +G + DR ++ A + TD N N+++E S + L Sbjct: 1 MSSSES-FYWHDYETSGANVFEDRPLQFAGVRTDKNFNVISEPLVHYCRPSPDCLL---- 55 Query: 61 WNVRTHTASGLVERVKASTMGDREA------ELATLEFL-KQWVPAGKSPICGNSIGQD- 112 H ++ + + +A E A + + ++++ G + NS+ D Sbjct: 56 -----HP-----AAIRVTGISPYKALAEGANEGAFMAKIQREFMVPGTCALGYNSVRFDD 105 Query: 113 ---RRFLFK--YMPELEAYFHYRY----LDVSTLKELARR----WKPEILDGFT------ 153 R L++ + P + R +DV+ R W P DG Sbjct: 106 EITRFALYRNFFPPYAREFGQNRSRWDLIDVARAIYALRPDGIVW-PIREDGLPSFRLED 164 Query: 154 --------KQGTHQAMDDIRESVAELA 172 H A+ D+ ++A Sbjct: 165 LTAANGIDHGNAHDALADVLATIALAK 191 >UniRef50_Q7NC15 PolC n=1 Tax=Mycoplasma gallisepticum RepID=Q7NC15_MYCGA Length = 1501 Score = 44.7 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 5/106 (4%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIA-VHQSDEQLALMDDWNVRTHTASG 70 D+E TGL+ ++IIEIA + A LN+ + + ++ + + T +G Sbjct: 421 DIETTGLNAYYEQIIEIAAVRVKAELNVTNHQLEFVQIGKFEKLIKNKKPLSKFTTQLTG 480 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL 116 L K S + D + E LE ++ + N I D ++ Sbjct: 481 L----KDSDLKDAQDEKTVLEEFVNFIQKDDVLVAHNGIDFDFIWI 522 >UniRef50_D2RJV7 DNA polymerase III, epsilon subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJV7_ACIFE Length = 223 Score = 44.7 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 63/171 (36%), Gaps = 36/171 (21%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTI-AVHQSDEQLAL--MDDWNVRTH 66 +DLE TGLDPERD+IIEI L VT G T + Q L + + R Sbjct: 28 VDLETTGLDPERDQIIEIGALEVTAGK-----RGRTFSTLLQPRTPLEGQYVSPFITRL- 81 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDR------RFLFKYM 120 +G+ + A+ R+A A +FL G G ++G D Y Sbjct: 82 --TGITNEMLAAAPQPRQALEAFGKFL------GSRVAVGYNVGFDMGFLQQQFQDQLYR 133 Query: 121 PELEAYFHYRYLDV-STLKELARRW------KPEILDGFTKQGTHQAMDDI 164 P + +DV + L W + H+A+ D+ Sbjct: 134 PLANDW-----VDVLPMAQTLFPLWDHHRLNNLAAWYHVENKEAHRALSDV 179 >UniRef50_C5B5Z3 Protein with DNA-directed DNA polymerase-like domain n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5Z3_METEA Length = 754 Score = 44.7 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 58/178 (32%), Gaps = 33/178 (18%) Query: 7 NLIWIDLEMTGLDPER-DRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + ID E TGL P DR+IE+ + + D + + A + Sbjct: 543 RFVVIDFETTGLSPNNGDRVIEVGAVEIVDGR---IGRRFQSLANPGFPVSARIT----- 594 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + E F++ G + + N+ G DRRFL M L Sbjct: 595 --AITGISNAMLVDAPPLAEVIREVSAFIE-----GATLVAHNA-GFDRRFLQAEMERLG 646 Query: 125 AYFHYRYLDVSTLKELARRWKP-----------EILDGFTKQGTHQAMDDIRESVAEL 171 + L L +R P E H+A+ D + AEL Sbjct: 647 LWDDREML---CTMRLGKRAYPGLGSYKLAFLAEHAGVALPDAMHRALADAMAT-AEL 700 >UniRef50_B4AHF2 DNA polymerase III PolC-type (PolIII) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHF2_BACPU Length = 240 Score = 44.3 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 67/178 (37%), Gaps = 34/178 (19%) Query: 11 IDLEMTGLDPERDRIIEIATL-------VTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +DLE TGLD ++D+IIEI + V ++ T+ + L ++ Sbjct: 9 LDLETTGLDHKKDQIIEIGAIKIRLGGRV--REFEEVSRFHTMVALEEGRDLP---EFIT 63 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFL------KQWVPAGKSPICGNSIGQDRRFLF 117 +G+ E + +A F+ Q P S I I +R + Sbjct: 64 NL---TGITEEDLEDAPEEWDALDELQNFIGDAIVVAQNAPFDLSFISRGDIEPERFYCT 120 Query: 118 KYMPE-LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYY 174 + M +E ++LK++ +R + G H+A++D+ ++ Y Sbjct: 121 RAMARFVEPELS------ASLKDVTKRIGISL------DGHHRALNDVEATIEVFRRY 166 >UniRef50_C7IIY1 DNA polymerase III, epsilon subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIY1_9CLOT Length = 726 Score = 44.3 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 30/170 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 E++ + D+E TGL+P +D+I EI + V + + + + V+ + + Sbjct: 419 EDDFVVFDIETTGLNPHQDKITEIGAVKVRNGQ---IVDRFSAFVNPGVSIPSFIV---- 471 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ + + + +EF++ G + N+ D F+ + + Sbjct: 472 ---KLTGITDDMVKDAPPVEQVLNEFMEFIQ-----GSVLVAHNA-NFDVGFIKQNAKLM 522 Query: 124 EAYFHYRYLDVSTLKELARRWKPEI----LDGFTK------QGTHQAMDD 163 Y+D EL R+ PE+ L+ K + H+A+DD Sbjct: 523 GEKVKNPYIDT---LELCRKMFPELGRYKLNIVAKHLKIELENHHRAVDD 569 >UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCZ9_9CAUL Length = 476 Score = 44.3 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 14/117 (11%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++ D E TGL D+I++ A + TD +LN L Q H Sbjct: 3 FVFYDTETTGLSKGFDQIVQFAAIHTDGDLNELDRFELRCRLQPHVV----------PHP 52 Query: 68 ASGLVERV---KASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFKYM 120 + L R+ + + + E ++ G+ G NSI D L Sbjct: 53 KAMLANRLSIERLTDLSLPSHYDMVREIRRRLSGWGRGIFIGYNSIRFDEEMLRHAF 109 >UniRef50_C8RRD8 Exonuclease n=2 Tax=Corynebacterium jeikeium RepID=C8RRD8_CORJE Length = 198 Score = 43.9 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 63/202 (31%), Gaps = 53/202 (26%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N I IDLE TGL P+ +RIIEIA L + + L + T ++ + + D Sbjct: 10 QNCIVIDLETTGLRPQEERIIEIAALHIRNGELQ---DKYTTLLNPNLSVPQEITD---- 62 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVP---------AGKSPICGNSIGQDRRF 115 +G+ + + A E L FL+ + G+++ D F Sbjct: 63 ---LTGISDGLLADKPTFSEVMPELLNFLRDATLTEPSTSLGFESTPRLVGHNVSFDFSF 119 Query: 116 LFK----------------YMPELE------AYFHYRYLDVSTLKELARRW---KPEILD 150 L Y P L R E R+ Sbjct: 120 LQHEILRTQLKNSADANRPYTPRLVCTAEASRTLIPR--------ESVGRYRLGNVASYL 171 Query: 151 GFTKQGTHQAMDDIRESVAELA 172 + H+AM D + L Sbjct: 172 KIPHRPLHRAMSDALATYDVLR 193 >UniRef50_UPI0000D530A7 DNA polymerase III subunit epsilon n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D530A7 Length = 226 Score = 43.9 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 10/85 (11%) Query: 11 IDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D+E TGLD E RIIEI + LN G HQ L + D N++ H Sbjct: 6 LDIETTGLDYKEGHRIIEIGCV----ELNQKEVGSNF--HQYINPLKTLTDENIKIH--- 56 Query: 70 GLVERVKASTMGDREAELATLEFLK 94 G+ + L F+K Sbjct: 57 GITNEFLEDKPLFEDVADKFLNFIK 81 >UniRef50_B4S7Q3 Exonuclease RNase T and DNA polymerase III n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S7Q3_PROA2 Length = 189 Score = 43.9 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 66/198 (33%), Gaps = 40/198 (20%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLV-TDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +++ D+E TG +P + II+I ++ D ++ E + + D + Sbjct: 6 KVLYCDVETTGTNPAKHGIIQIGAIIEVDG---VVVEECNLKCAPHEGAEISPDALAISG 62 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM----- 120 S L R S + ++Q+ K G +I D F+ + Sbjct: 63 TERSELESR-MTSHEAYTQFRHFLSRHIEQYDREDKCYPAGYNIHFDLNFIQAWFRHHGD 121 Query: 121 -PELEAYFHYRYLDVSTL----------------KELARRWKPEILDGFTKQGTHQAMDD 163 + ++ ++R LD L E R L H AM D Sbjct: 122 KYGIGSFINWRMLDPLPLLFIKDFTRQITLPDYRLETVCRHFGIALHA------HDAMSD 175 Query: 164 IRESVAELAYYREHFIKL 181 IR + RE +KL Sbjct: 176 IRAT-------RELLLKL 186 >UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammaproteobacteria RepID=Q21I25_SACD2 Length = 485 Score = 43.9 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 9/106 (8%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 W D E G +P DR + A + TD +LNI+ E I ++ + + T Sbjct: 5 FYWHDYETWGANPAVDRPSQFAGVRTDMDLNIIGEPLVIYCKPPEDIWPN-PEACLVT-- 61 Query: 68 ASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD 112 GL + A + +RE ++ G + NSI D Sbjct: 62 --GLTPQETLAKGVTEREFIKQIH---RELAKPGTCGVGYNSIRFD 102 >UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW Length = 482 Score = 43.9 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 17/130 (13%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + L++ DLE +G++ D++++ A + TD + N + D + M + Sbjct: 3 SNQTLLFYDLETSGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPMAT--I 60 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWV-PAGKSPICGNSIGQDRRFLF----K 118 H + + AE + + + + G I N++G D FL K Sbjct: 61 THH--------ISIAQANTGIAEYQAIRKIHKIINAPGTISIGYNTLGFDDEFLRFAFYK 112 Query: 119 YMPELEAYFH 128 M L Y H Sbjct: 113 NM--LPPYSH 120 >UniRef50_A5APD5 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5APD5_VITVI Length = 662 Score = 43.9 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 17/21 (80%) Query: 17 GLDPERDRIIEIATLVTDANL 37 GL+ E DRI+EIA ++TD NL Sbjct: 31 GLNVEVDRILEIACIITDGNL 51 >UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKN8_DESAH Length = 471 Score = 43.9 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 38/193 (19%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++ D+E +GL+P D+I+ A + TD L + +I + ++ + + Sbjct: 4 FLFYDIETSGLNPAFDQILTFAAIRTDLELREID-RTSIVISLRNDIVPSPGAF------ 56 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFKYMPE--LE 124 + R+ + D E + + + + + G NS+G D FL L+ Sbjct: 57 ---ITHRLTPEDLKDGLCEYQGVALIHRLLNTPDTISIGYNSLGFDDEFLRFAFYRNLLD 113 Query: 125 AYFH-YRY----LDVSTLKELARRWKPEILDGF--------------TKQG------THQ 159 Y H Y +D+ + L R +KP+ + K H Sbjct: 114 PYTHQYANDCARMDLLPIATLYRIFKPDGIHWPVIDDKASMRLELISEKNNLVQSGRAHD 173 Query: 160 AMDDIRESVAELA 172 AM D+ ++A Sbjct: 174 AMTDVEATLALAR 186 >UniRef50_Q3SMK3 Exonuclease n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMK3_THIDA Length = 233 Score = 43.9 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 21/160 (13%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +E + +D+E +GLDP RDR+I I + L + I + Q + + N+ Sbjct: 38 DEGRCVVVDVETSGLDPRRDRLIAIGAVAVSRGKVQLGDSLEIVLQQDT----VSEKGNI 93 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H G +R + + +A LA LE+L GK P+ + D + + M Sbjct: 94 LIHGIGGTAQR---AGVPPADALLAFLEYL------GKDPLVAFHVAFDAPMIRRAMKAF 144 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDD 163 LD S P + ++ +++DD Sbjct: 145 LG------LDFSHAWADLAYVAPALYPRLARRR--RSLDD 176 >UniRef50_C2BLZ4 DNA polymerase III subunit epsilon n=6 Tax=Corynebacterium RepID=C2BLZ4_9CORY Length = 221 Score = 43.6 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 21/37 (56%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIA 47 ID E TG + DRIIE+A + D++ N + T+ Sbjct: 24 IDTETTGFNKRYDRIIELAAVRADSHFNPIDSWHTLL 60 >UniRef50_A9FIM8 Exonuclease n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FIM8_SORC5 Length = 298 Score = 43.6 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 21/30 (70%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDAN 36 L+++DLEMTGL PE DR+IE+ T + Sbjct: 32 PLVFLDLEMTGLRPESDRVIEVCAERTRGD 61 >UniRef50_C0DA77 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0DA77_9CLOT Length = 255 Score = 43.6 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 21/111 (18%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILA---EGPTIAVHQSDEQLALMDDWNVRTHT 67 ID+E TGL+P D+I EIA L ++ EG + + L R Sbjct: 19 IDIETTGLEPRLDKITEIAA------LRVVDGAVEGRFVTLVNPGRPLG------ERIVE 66 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 +G+ + + A + + F G P+ G++I D FL + Sbjct: 67 LTGITDGMLAGAPAIGDVIGPLVRF------CGDLPLLGHNILFDYSFLKR 111 >UniRef50_B8EEZ7 DNA polymerase III, epsilon subunit n=2 Tax=Shewanella RepID=B8EEZ7_SHEB2 Length = 300 Score = 43.6 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 22/166 (13%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 I +D E TGL + D+IIEIA + D L+ ++ + + + Sbjct: 16 PTQFIALDAETTGLSADVDKIIEIAAIKFDL-LSNDHPVFEALINPNVKVSRKIT----- 69 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + +G+ + A + +F+ G PI + D+ FL + Sbjct: 70 --SITGITNAMLADQETFTDIAQDLKQFI------GDLPIVAYNAKFDKGFLDTEFANVG 121 Query: 125 AYF--HYRYLDVSTLKELARRWKPEILD-----GFTKQGTHQAMDD 163 HY ++ K ++ H+A D Sbjct: 122 IILNNHYHCA-LNLAKAAFNLPNYKLATVAEHCSIPLNEAHRAKAD 166 >UniRef50_Q07NS2 Exodeoxyribonuclease I subunit C n=5 Tax=Alphaproteobacteria RepID=Q07NS2_RHOP5 Length = 490 Score = 43.6 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 44/130 (33%), Gaps = 25/130 (19%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-------GPTIAVHQSDEQLALMDD 60 ++ D E TGL D+I+ A + TD +LN P + H S + + Sbjct: 3 FVFFDTETTGLRHGFDQIVHFAAIRTDNDLNETDRFEVRSRLLPHVVPHPSALRTNRLS- 61 Query: 61 WNVRTHTASGLVERVKASTM-GDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 +ER+ T+ E A L W P+ + NSI D L Sbjct: 62 -----------IERLIDGTLPSHYEMVRAIQRTLLAWSPS--IFVGYNSIRFDEEMLRH- 107 Query: 120 MPELEAYFHY 129 L H Sbjct: 108 --ALFQTLHP 115 >UniRef50_UPI0001693F5B Exonuclease RNase T and DNA polymerase III n=3 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693F5B Length = 203 Score = 43.2 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 18/23 (78%) Query: 12 DLEMTGLDPERDRIIEIATLVTD 34 DLE TGLDP +D+I EIA + TD Sbjct: 9 DLETTGLDPTKDQITEIAAIRTD 31 >UniRef50_C1DWW1 DNA polymerase III PolC-type (PolIII) n=4 Tax=Hydrogenothermaceae RepID=C1DWW1_SULAA Length = 205 Score = 43.2 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 30/165 (18%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +DLE TGL+P IIEIA L + I+ + V S + + + + +G Sbjct: 14 VDLETTGLNPVNSEIIEIAALRVEGG--IVVDKFHTLVKPS---IGFIPTYITKL---TG 65 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + E L+F + N+ D FL ++ R Sbjct: 66 ITNALVVDKPTIEEVFPQFLKF-----SENSIIVAHNA-QFDMSFLNSVSYQITG----R 115 Query: 131 YLDVSTLKE--LARRWKPEILDG----------FTKQGTHQAMDD 163 + L LA+R P++ H+A++D Sbjct: 116 SIQNPVLCTQNLAKRLFPDLPSKSLVNLAYHFNIPYNKKHRALED 160 >UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae RepID=B5K7E4_9RHOB Length = 500 Score = 43.2 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 14/126 (11%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + ++ DLE TGL P D+ ++ A + TD N + + I + L V Sbjct: 2 DFVFYDLETTGLSPAFDQPLQFAAIYTDENF-VEKDRVNIRCRLAPHILPSPQALVVTRV 60 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 T L + S E E ++W PA + N+I D L + Sbjct: 61 TPDQLTD---PSLPSLFEFSQQVAELTERWAPA--IWVGYNTIKFDEEVLRQTF------ 109 Query: 127 FHYRYL 132 YR L Sbjct: 110 --YRNL 113 >UniRef50_B8FZZ1 DnaQ family exonuclease/DinG family helicase n=2 Tax=Desulfitobacterium hafniense RepID=B8FZZ1_DESHD Length = 929 Score = 43.2 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 32/179 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + ++ ID+E TG D D IIE A L + AE ++ + + + Sbjct: 3 KGKIVVIDIETTGFDIYNDEIIEFAALCIEEG--EEAEAFSVLISPRRQVPERIL----- 55 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + L+ + + I G+++ D FL + L Sbjct: 56 --RLTGISPEELKQAGSLQAYRDKILDLFQ------DAIIVGHNVEFDLGFLEQ---ALT 104 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGF-----------TKQGTHQAMDDIRESVAELA 172 +F D E+AR P + + H+A+ D R + L Sbjct: 105 IHFENTLWDT---LEIARILYPNMPKYKLGDLTKSLGLTPLEKAHRALFDARAAWELLQ 160 >UniRef50_B1GYV2 DNA polymerase III epsilon subunit n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYV2_UNCTG Length = 198 Score = 43.2 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 49/197 (24%) Query: 5 ENNLIWIDLEMTGLDPERD-RIIEIATLVTDANLNI---LAEGPTIAVHQ----SDEQLA 56 +NL+++D+E TGLDPE+ I+EIA L + + E V+ E Sbjct: 15 PDNLVFLDIETTGLDPEKGANIVEIAM------LKVCGGIEERYESLVNPGLPIPSE--- 65 Query: 57 LMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQ-WVPAGKSPICGNSIGQDRRF 115 + H + + + ++ E F+ V +P D F Sbjct: 66 -----CSKIHA---IYDDMIKNSPSFDEIAGNVFSFIGHSVVVCHNAP-------FDLLF 110 Query: 116 LFKYMPEL-EAYFHYRYLDVSTLKELARRWKPEILD--------GFTKQGTHQAMDDIRE 166 +++ + + RY+D TLK + + + G + H+AM D+ Sbjct: 111 VYRELYLAGVPVKNIRYID--TLKLARQYFSFDSNKLGNIADAIGIEAELRHRAMADVLT 168 Query: 167 SVAELAY-----YREHF 178 + Y YR+ Sbjct: 169 MFSVAKYIFANMYRKDI 185 >UniRef50_Q049V0 DNA polymerase III, alpha subunit (Gram-positive type) n=3 Tax=Lactobacillus delbrueckii RepID=Q049V0_LACDB Length = 1411 Score = 43.2 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 39/179 (21%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M + + D+E TGL D IIEI + + + E + D Sbjct: 385 MKYEDQEFVIFDVETTGLSSVYDTIIEIGAV----KMK------------NGEVIDRFDK 428 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFL--- 116 + H S + + T +A +KQ++ G P+CG+++ D F+ Sbjct: 429 FINPHHPLSETTINLTSITDEMVQAADDEAVVIKQFMDFYGNDPLCGHNVQFDVGFVDAA 488 Query: 117 --FKYMP----------ELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDD 163 P E+ H TL L R++ + H+A D Sbjct: 489 LKRCGYPEISQPVVDTLEVSRLLHPEQSR-HTLDSLCRKYNVALEHH------HRANQD 540 >UniRef50_B3DQ35 DNA polymerase III alpha subunit n=6 Tax=Bifidobacterium longum RepID=B3DQ35_BIFLD Length = 235 Score = 43.2 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 18/162 (11%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +DLE TG P I EI + + EG V Q + + + + T +G Sbjct: 37 LDLETTGFYPNSCAITEIGAV-------RVREGH--IVDQFQQLVNPLRPIPRQITTLTG 87 Query: 71 LVERVKASTMGDREAELATLEFLK-QWVPAGKSPICGNSIGQDRRFLFKYMPELE----A 125 + + + A E + +L PI G+++ D RFL + A Sbjct: 88 ITDAMVADLDPIDEVLPRFIAWLATPAAGPAVEPIVGHNVSFDLRFLDYNTRHIAGCGFA 147 Query: 126 YFHYRYLDVSTLKELARRWKP----EILDGFTKQGTHQAMDD 163 Y + +S A+R + G H+A+ D Sbjct: 148 CADYDTMQISRALFPAQRHHRLADLIVRFGIADNEEHRALSD 189 >UniRef50_Q96IC2 Putative RNA exonuclease NEF-sp n=26 Tax=Eutheria RepID=REXON_HUMAN Length = 774 Score = 42.8 bits (100), Expect = 0.005, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 47/191 (24%) Query: 3 ANENNLIWIDLEM--TGLDPERDRI---IEIATLVTDANLNILAEGPTIAVHQSDEQLAL 57 A+ + L +D EM T E RI E V D V ++ L Sbjct: 223 ADNSPLFGLDCEMCLTSKGRELTRISLVAEGGCCVMDE-----------LVKPENKILDY 271 Query: 58 MDDWNVRTHTASGLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL 116 + + SG+ +++ T ++ + L + + G+S+ D R L Sbjct: 272 LTSF-------SGITKKILNPVTTKLKDVQRQLKALL-----PPDAVLVGHSLDLDLRAL 319 Query: 117 FKYMPELEAYFHYRYLDVSTL--KELARRWKPEILDG--------FTKQGTHQAMDDIRE 166 H +D S L +E RR+K + L + H A +D R Sbjct: 320 --------KMIHPYVIDTSLLYVREQGRRFKLKFLAKVILGKDIQCPDRLGHDATEDART 371 Query: 167 SVAELAYYREH 177 + Y+ +H Sbjct: 372 ILELARYFLKH 382 >UniRef50_Q1QDN3 Exonuclease n=3 Tax=Psychrobacter RepID=Q1QDN3_PSYCK Length = 203 Score = 42.8 bits (100), Expect = 0.005, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 33/176 (18%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + ID EMTGL+P++ ++ +A + + + G + +M + Sbjct: 32 DEQWVAIDCEMTGLNPKKHHLLSVAAIHINGDKIDTGNGLHLLCRPP-----VMPE---- 82 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL----FKYM 120 + ++ ++ + + + L L ++ P+ G D FL YM Sbjct: 83 --GDTIVIHGLRTADVEHAMSYDEMLGLLLPFISNR--PLVGFCPQIDVGFLNPLVKHYM 138 Query: 121 PELEAYFHYRYLDV------------STLKELARRWKPEILD-GFTKQGTHQAMDD 163 + +D+ L A+ + + GTH A +D Sbjct: 139 ---GTHLPNEIIDIRPLYSRRMMGRSQGLSSQAQHLNSILAHYNIPELGTHDAYND 191 >UniRef50_Q315G7 DNA polymerase III, epsilon subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q315G7_DESDG Length = 239 Score = 42.8 bits (100), Expect = 0.005, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 13/107 (12%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGL 71 D+EMTGLDPE D I+ I + I + V + L Sbjct: 45 DMEMTGLDPEHDEIVAIGAVRIRGLSIITGDVFHTYVRPQ-----------RSMARPATL 93 Query: 72 VERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 + R+ + + A L W G++ I G+ +G D FL + Sbjct: 94 IHRITPAQLQHSPALAGLLPGFVDWC--GQALITGHHVGLDMGFLTR 138 >UniRef50_Q1QZ77 Exonuclease n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ77_CHRSD Length = 205 Score = 42.8 bits (100), Expect = 0.005, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 28/167 (16%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D E T LDP + ++ IA + V D + + +E + + + D + +R H Sbjct: 34 LDCETTDLDPRQADLVAIAAVKVRDGRV-LTSESLDLRLQRPDSLSSDS----IRIHGLR 88 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM-PELEAYFH 128 G+ +A L+F+ G P+ G I D + +++ P Sbjct: 89 GVD---LLGGEALGDALNTLLDFI------GNRPLVGWCIDYDVAVINRHLRPRTGFDLP 139 Query: 129 YRYLDVSTLKELARRWK-PEILD-----------GFTKQGTHQAMDD 163 R +DV L RR P++ G G H A+ D Sbjct: 140 NRTIDVCRLYARERRRAQPDVEPDLRFEAMSEALGVPVMGRHTALGD 186 >UniRef50_Q2W5J8 DNA polymerase III epsilon subunit and related 3'-5' exonuclease n=11 Tax=Bacteria RepID=Q2W5J8_MAGSA Length = 306 Score = 42.8 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 15/23 (65%), Positives = 19/23 (82%) Query: 9 IWIDLEMTGLDPERDRIIEIATL 31 I+IDLE TGLDP +D IIE+A + Sbjct: 53 IFIDLETTGLDPAKDEIIELAMV 75 >UniRef50_B5ZV55 DNA polymerase III, epsilon subunit n=23 Tax=Alphaproteobacteria RepID=B5ZV55_RHILW Length = 245 Score = 42.8 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 54/168 (32%), Gaps = 35/168 (20%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGL 71 D E TGLD DRIIEI + + I ++ D+++ + H G+ Sbjct: 7 DTETTGLDNRADRIIEIGGIELFNHF-PTGNVIHIYINPGDQKV---HPDALAVH---GI 59 Query: 72 VERVKASTMGDREAELATLEFL--KQWVPAGKSPICGNSIGQDRRFLFKYMPE--LEAYF 127 + E L F +W+ + D F+ + L Sbjct: 60 TDEFLKDKKPFAEVAEEILTFFGDAKWIAHNAT--------FDMGFINAELARIGLPPIL 111 Query: 128 HYRYLD------------VSTLKELARRWKPEILDGFTKQGTHQAMDD 163 R LD ++L L RR+ + + H A+ D Sbjct: 112 PERVLDTLSMARRKHPMGPNSLDALCRRYGIDNSH----RTKHGALLD 155 >UniRef50_C5BKW5 Putative exonuclease n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BKW5_TERTT Length = 235 Score = 42.4 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 24/120 (20%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 EN + +D EM+GLD R +++ I +V + A G + +H Sbjct: 39 RENRFLVVDCEMSGLDANRSQLLSIGWVVIENARITHASGKHLLIHADRGAGDS-----T 93 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPA-----GKSPICGNSIGQDRRFLFK 118 R H + +T+ ++ A + L + VP +P+ D RFL + Sbjct: 94 RIHG-------LHDATIAGAKSAAAAITLLAKQVPGSVLVFHHAPL-------DLRFLQQ 139 >UniRef50_C5EVY5 DNA polymerase III subunit epsilon n=2 Tax=Clostridiales RepID=C5EVY5_9FIRM Length = 240 Score = 42.4 bits (99), Expect = 0.007, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 17/109 (15%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +DLE TGL+P++++I EIA L V D ++++ V+ A + + Sbjct: 8 LDLETTGLEPKQEKITEIAALKVVDG---VISQRYVTFVNPGRSLGAYITQ-------LT 57 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 G+ + + A E ++F G P+ G++I D FL Sbjct: 58 GITDGMLADAPPIEELIEDVVKF------CGDLPLLGHNIRFDYSFLKH 100 >UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacteria RepID=Q483M2_COLP3 Length = 487 Score = 42.4 bits (99), Expect = 0.007, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 17/125 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++W D E G++P+ D+ + A + TD +LNI+ E + L + + T Sbjct: 15 ILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEPEMFYCTPPVDYLPH-PEACLVT-- 71 Query: 68 ASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 G+ ++ + + + E Q NSI D E+ Y Sbjct: 72 --GITPQKAQREGLSEAEFAARIHTLFTQ---PNTCVAGYNSIRFDD--------EVTRY 118 Query: 127 FHYRY 131 YR Sbjct: 119 LLYRN 123 >UniRef50_A2BVT4 Possible DNA polymerase III, epsilon subunit n=8 Tax=Prochlorococcus marinus RepID=A2BVT4_PROM5 Length = 270 Score = 42.4 bits (99), Expect = 0.007, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 33/165 (20%) Query: 11 IDLEMTGLDPERDRIIEIATL---VTDAN-LNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 +D E TGLD +D IIEI + VT + L+ ++ ++ ++++ Sbjct: 52 LDTETTGLDENKDEIIEIGCILFHVTSKSVLSQVSFLFPVSSNEAEHV------------ 99 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY-MPELEA 125 +G+ V ++ L F + V + N + D+++ K +P LE Sbjct: 100 --NGISAEV----SNIKQPWEEGLNFFLKLVDCADLIVAHN-VEFDKKWFGKGRLPNLEK 152 Query: 126 Y--FHYRYLDVSTLKELARRWKPEILD-----GFTKQGTHQAMDD 163 ++ S K L R P + D H+A+ D Sbjct: 153 NWICSLEDINWSFQKNLKNR--PSVTDLALSFSIPVWSLHRALSD 195 >UniRef50_D1VSB7 DNA polymerase III, alpha subunit, Gram-positive type n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSB7_9FIRM Length = 1415 Score = 42.4 bits (99), Expect = 0.007, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 36/166 (21%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 D+E TGL P RD+I EI + + D I+ E + ++ + + Sbjct: 405 DIETTGLSPIRDKITEIGAVKIVDG---IITERFSQLINPQMLIPEKVQELTR------- 454 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + + E +F+K V + N+ D F+ + E + F Sbjct: 455 ITNALVENEPTIEEVAPKFYDFIKDSV-----LVAHNA-KFDTAFIRRVFKENDLDFINP 508 Query: 131 YLDVST-------------LKELARRWKPEILDGFTKQGTHQAMDD 163 LD + L L +++ ++ G H+A++D Sbjct: 509 ILDTLSFARATVKDTKKFNLATLCKKFGVSLV------GAHRAVND 548 >UniRef50_B4W5N5 DNA polymerase III, epsilon subunit n=2 Tax=Caulobacteraceae RepID=B4W5N5_9CAUL Length = 241 Score = 42.4 bits (99), Expect = 0.007, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 39/173 (22%) Query: 11 IDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D E TG DP+ DR+IE+ + +L V+ E+L D +R H Sbjct: 7 LDTETTGFDPKTGDRLIEVGCIEI-QDLLPTGRTFHRFVNP--ERLIPPDA--IRVH--- 58 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF-----KYMPELE 124 G+ + E +EF+ G +P+ ++ G DR F+ P Sbjct: 59 GITDDKVKDAPKFHEIADDLIEFI------GDAPMIAHNAGFDRNFIDFEYKLCGRPITG 112 Query: 125 AYFHYRYLD------------VSTLKELARRWKPEILDGFTKQGTHQAMDDIR 165 R++D ++L L +R+K +++ + H A+ D R Sbjct: 113 ET---RWIDTLKLAQARFPGMPNSLDALCKRFKVSLVE----RTLHGALIDAR 158 >UniRef50_A7A526 Putative uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A526_BIFAD Length = 256 Score = 42.4 bits (99), Expect = 0.008, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 51/165 (30%), Gaps = 30/165 (18%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 IDLE TG P DRI+EI + V + + + L + Sbjct: 89 IDLETTGFSPSDDRIVEIGAIRVRNG--RPVKRYSQLIN--PQRPL------PEEITRLN 138 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL-EAYFH 128 GL + + + + F+ + I N D FL L + Sbjct: 139 GLTDADLRNQPTVDQVLPDFIRFI-----GNDTLIGHNINEFDAAFLLANTTRLGMRHIG 193 Query: 129 YRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD 163 + +D L R PE G + +H+A DD Sbjct: 194 NKTIDT---LPLDRALYPEEPKHRLVDIIRRFGIAQTESHRAADD 235 >UniRef50_B7CAB9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAB9_9FIRM Length = 525 Score = 42.0 bits (98), Expect = 0.008, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 10/112 (8%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + D+E TGLD ++DRIIE+ ++ + + E + V+ + + H Sbjct: 51 RYVAFDVETTGLDSKKDRIIEVGAILFENGHTV--ETYSSLVNPEVKI---SKEATTINH 105 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 +G+V++ + ++FL + ++PIC ++ D FL + Sbjct: 106 ITNGMVKK----APTEDIVCKELVKFLGDAL-HEQTPICAHNADFDMSFLSQ 152 >UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPJ8_9GAMM Length = 482 Score = 42.0 bits (98), Expect = 0.008, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 10/113 (8%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS++E L W D E G+DP DR + A L TD +LN + E + + + D Sbjct: 1 MSSSET-LYWHDYETFGVDPGYDRPAQFAGLRTDLDLNPIGEPLVLYAKPPRDYVPH-PD 58 Query: 61 WNVRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD 112 + T G+ + A+ + + + L +++ G + NS+ D Sbjct: 59 ACLIT----GITPQAALAAGVPEADF---IKAILHEFMQRGTCAVGYNSLRFD 104 >UniRef50_Q31GK8 Exonuclease n=8 Tax=Bacteria RepID=Q31GK8_THICR Length = 207 Score = 42.0 bits (98), Expect = 0.008, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 60/157 (38%), Gaps = 24/157 (15%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD- 60 + +++ ++ D E TGL+P +DRI+ ++ + N + +E + Q Sbjct: 25 TPSDDEVVCFDCETTGLNPRKDRIVSLSAIKIRGNEVLTSEALNLTFVQEAAISEESIKI 84 Query: 61 -WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 W T +GL ++E A L F+ G P+ G + D + + Sbjct: 85 HWIRNEDTKAGL---------SEQEGIEAFLHFI------GSRPLVGYYLEFDVAMVNQI 129 Query: 120 M-PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ 155 + P L ++VS+ R+ + K+ Sbjct: 130 IKPWLGITLPNAQIEVSS------RYYDYKEEIIPKK 160 >UniRef50_A7B5W2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5W2_RUMGN Length = 219 Score = 42.0 bits (98), Expect = 0.009, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 48/173 (27%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGL 71 DLE TG+ D IIEI+ + I+ + + V+ A +G+ Sbjct: 19 DLETTGISANMDDIIEISAVKVKGG--IVQDTFSTLVNPGRHIPAQATKV-------NGI 69 Query: 72 VERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI-GQDRRFLFK------------ 118 +++ + REA L F+ G+ + G++I D +F+++ Sbjct: 70 TDQMVSEAPLIREAMTEFLRFV------GEDILVGHNIQSFDMKFIYREVEELFQETVSN 123 Query: 119 ------YMPE--LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDD 163 YM L H+R D LA + G + +G H+A++D Sbjct: 124 DFIDTLYMARKCLPELKHHRLTD------LAEHF------GISSKGAHRALND 164 >UniRef50_C0QPN1 DNA polymerase III subunit epsilon n=1 Tax=Persephonella marina EX-H1 RepID=C0QPN1_PERMH Length = 206 Score = 42.0 bits (98), Expect = 0.009, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 30/165 (18%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNI-LAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 DLE TGLD E+D II I + + I L+ V + Sbjct: 39 DLETTGLDVEKDEIISIGAVKI-KEMKIDLSTSFYRIVKPERIP-----------EKENI 86 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY------MPELE 124 L+ + AS M E L +++ + + G + D L KY P L Sbjct: 87 LIHSITASEMKKGEDIRDVLPKFLEYIKG--TVLIGYFVSFDISMLSKYTQKFYGFPILN 144 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVA 169 Y +DVS L + + ++ +D I E + Sbjct: 145 PY-----IDVSQLYIKKKVKSYTPYEKIKEKS----LDQIAEELN 180 >UniRef50_C5CIX0 DNA polymerase III, epsilon subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIX0_KOSOT Length = 185 Score = 42.0 bits (98), Expect = 0.009, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 62/169 (36%), Gaps = 33/169 (19%) Query: 11 IDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 ID E TG P R DRIIEIA + + V+ A + Sbjct: 8 IDTETTGPSPLRGDRIIEIAAIPIYRGKMFVDLAFHSLVNPQIRIPAYIS-------GIH 60 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY-FH 128 GL S + E+L G + I G+SI D +F E+ + Sbjct: 61 GLKNEDVTSEPTISDVFPRFKEYL------GNAIIVGHSIEVDMKFFDIACKEIGTFPLS 114 Query: 129 YRYLDV------------STLKELARRWKPEILDGFTKQGTHQAMDDIR 165 +Y+D +L ELA+R +I D TH+A+DD R Sbjct: 115 NQYIDTLKIAKDLFKEGSYSLAELAKRL--KIKDAP----THRALDDAR 157 >UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria RepID=A4ADV7_9GAMM Length = 482 Score = 42.0 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 12/114 (10%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS++E W D E G+DP DR + A L TD +LN++ E I + + Sbjct: 1 MSSSET-FYWHDYETFGVDPAYDRPSQFAGLRTDLDLNLIGEPLVIYAQPPRDYVP---- 55 Query: 61 WNVRTHTASGLVERVKAST-MGDREAELATLE-FLKQWVPAGKSPICGNSIGQD 112 H + L+ + T + + E + L +++ G + NS+ D Sbjct: 56 -----HPDACLITGITPQTALAEGVVEAQFMSTILDEFMKPGTCAVGYNSLRFD 104 >UniRef50_Q2NJG3 DNA polymerase III alpha subunit n=3 Tax=Candidatus Phytoplasma RepID=Q2NJG3_AYWBP Length = 1572 Score = 42.0 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 32/165 (19%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 DLE TGL RD+IIEIA + + + N + E + + + + + Sbjct: 485 DLETTGLSNVRDKIIEIAGIKIKNG--NKIGEFQKF-IDPQQKLTKTITN-------ITN 534 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + + + L F K V + N+ D FL + EL+ + Sbjct: 535 ITDEMLQGQQTIDQVLPQFLAFAKDCV-----LVAHNA-SFDVDFLKEKAKELKISLEPK 588 Query: 131 -YLDVSTLKELARRWKPEILDGFT-KQGT----------HQAMDD 163 +D L++R+ +L F+ K+ H+A+ D Sbjct: 589 PIIDT---MALSQRYFSNLLKYFSLKRLATVFKVKLEDHHRALAD 630 >UniRef50_Q1D091 Exonuclease n=2 Tax=Cystobacterineae RepID=Q1D091_MYXXD Length = 988 Score = 42.0 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 9 IWIDLEMTGLDPERDRIIEIATL 31 +++DLE TGLDP D +IE+ + Sbjct: 12 VFLDLETTGLDPRVDEVIELGCI 34 >UniRef50_Q2RWQ8 Exonuclease n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWQ8_RHORT Length = 209 Score = 41.6 bits (97), Expect = 0.010, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 13/116 (11%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A E ++ +D E TGLD D II +A + N + ++ + V S D Sbjct: 26 APEGEVVSVDCETTGLDRHNDDIITLAAVRVRGNRVLTSQKLDLVVKPSRPI--RRDAVC 83 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 + L E+ + REA L F AG P+ G + D + + Sbjct: 84 IHH-----LREQDVERGLAPREAVARFLRF------AGSRPLIGYYLEFDVALIDR 128 >UniRef50_D1NVL2 Exonuclease family protein n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NVL2_9BIFI Length = 249 Score = 41.6 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 27/170 (15%) Query: 20 PERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKAST 79 P+ D +IE+A + + + P V Q + +A +GL + A Sbjct: 91 PDSDELIELAAI------RVRSGKP---VGQMETLVAQSGPLPQDVAARTGLTDAALAGQ 141 Query: 80 MGDREAELATLEFL--KQWVPAGKSPIC--------GNSIGQDRRFLFKYMPELEAYFHY 129 ++A L F+ ++ + + + R L P + Y Sbjct: 142 PSVKQAIEQFLSFVGNDTFIAPNVGRMQTELFLAERASGVPMHRNILID--PLMLEQQMY 199 Query: 130 RYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 D S++ L R +++ +A+ +++VA + R+ I Sbjct: 200 PGDDTSSINALMNR--AGLMEAP----ATRALTACKQTVACYRWLRQTII 243 >UniRef50_C8PWB9 DNA polymerase III subunit epsilon n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWB9_9GAMM Length = 215 Score = 41.6 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 58/175 (33%), Gaps = 29/175 (16%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N + +DLEMTGL+ ++D I+ + + + E + + + T Sbjct: 39 NEWVSLDLEMTGLNAKQDYILSVGAV------QVRKESNGFVIDTDSALSLVCRPPVMPT 92 Query: 66 HTA---SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK-YMP 121 H GL + + E L LK PI G + D FL P Sbjct: 93 HDTIVIHGLRPIDVDNGLSYDEMLTQLLPMLKN------RPIIGFCVDMDMAFLNAIAKP 146 Query: 122 ELEAYFHYRYLDVSTLKELAR-RWKPEILDGFTKQG------------THQAMDD 163 L + +DVS L + + R P + H A++D Sbjct: 147 FLGVELANKLVDVSRLYQQNQHRHDPSQVGQLPHLNQLLEEYQIPRLPAHNALND 201 >UniRef50_A1TZ29 DNA polymerase III, epsilon subunit n=3 Tax=Marinobacter RepID=A1TZ29_MARAV Length = 235 Score = 41.6 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 67/161 (41%), Gaps = 23/161 (14%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + + LI +DLE TGL+ +D +I I + + + L + + + + + L + Sbjct: 37 SRSRLIVLDLETTGLNASKDEVIAIGAVAIEGGVIHLNDQFDLILRRPE--LDI------ 88 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM-PE 122 + L+ + + L +L +W+ G + +S D++FL K + + Sbjct: 89 ---RETVLIHGIGPEALTQGYETQDALLYLLEWM-NGDPILAYHS-AFDQKFLEKTLKSQ 143 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDD 163 L + ++DV+ L P T +G + +DD Sbjct: 144 LGYTLPHVWMDVAELM-------PAFFPKATIKG--RGLDD 175 >UniRef50_C7H779 DNA polymerase III, alpha subunit n=5 Tax=Clostridiales RepID=C7H779_9FIRM Length = 1417 Score = 41.6 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 29/163 (17%) Query: 12 DLEMTGLDPERDRIIEI-ATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 D E TGLDP + + EI A +V + + E V + + +G Sbjct: 401 DTETTGLDPGVEYLTEIGAVIVRNGE---VVEEFDTFVKPGKPITPKITE-------LTG 450 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + A G++EA A L F G+ + N+ D RFL F Sbjct: 451 ITNEMVADAPGEKEALEAFLRFA-----DGRILVAHNAHAFDIRFLKAAAKRSGISFEPT 505 Query: 131 YLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD 163 Y+D +A+ P + + H+A +D Sbjct: 506 YIDT---LTMAQAMYPGLHNYKQGTINKHLELPSYEAHRACED 545 >UniRef50_A0R7K3 Exonuclease, RNase T and DNA polymerase III n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7K3_PELPD Length = 304 Score = 41.6 bits (97), Expect = 0.011, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV----RTH 66 ID E TG + D IIE+ + + + E I + + +D Sbjct: 50 IDTETTGFNFSDDVIIELGIVAFEYDAMT-GEISRIV-----DTYSGFEDPCRPLDPEVT 103 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + + A +A + + V C N DR FL + PE E Sbjct: 104 AVTGITDDMLA-GQSLDDAA------VGKIVSQASLCFCHNC-KFDRSFLERRFPEFEK 154 >UniRef50_A9AEP6 DNA polymerase III, epsilon subunit n=55 Tax=Burkholderia RepID=A9AEP6_BURM1 Length = 398 Score = 41.6 bits (97), Expect = 0.012, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 57/171 (33%), Gaps = 29/171 (16%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A+E L+++DLE TG P RI EI + + L + + + + Sbjct: 33 ASEQPLVFVDLETTGGTPAEHRITEIGVV----EIGPLGVSTWTTLVNPGQPIP---PFI 85 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 + +G+ + + E A E L GK + N+ DR FL Sbjct: 86 QQL---TGISDAMVRDAPSFAELAPALFERL-----DGKLFVAHNA-SFDRGFLRAEFER 136 Query: 123 LEAYFHYRYLDVSTLKELARRWKPE----------ILDGFTKQGTHQAMDD 163 F+ DV L+R P G H+A+ D Sbjct: 137 AGFAFNP---DVLCTVRLSRALFPRESRHGLDALIARHGLVPAARHRALAD 184 >UniRef50_A5KMD9 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KMD9_9FIRM Length = 279 Score = 41.6 bits (97), Expect = 0.012, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 35/181 (19%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 DLE TGLDP + IIEI L V D ++E + + + +G Sbjct: 43 DLETTGLDPMNNEIIEIGALKVRDGK---VSERFMEFIKPQELISPAIT-------GLTG 92 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + AS R ++F ++ + + G++I D F + Sbjct: 93 ISNDMVASARPARSVITDFIDFCEEDI------LIGHNIIFDYSFTKCT--AAREGLPFE 144 Query: 131 YLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVAELAYYR--EHF 178 + + TLK +A++ PE+ + H+A D ++A Y+ H+ Sbjct: 145 KMGIDTLK-IAKKVHPELESKSLSALCEHYKIENKAAHRAYFD---ALATAKLYQTLSHY 200 Query: 179 I 179 Sbjct: 201 F 201 >UniRef50_C6XW17 Exonuclease RNase T and DNA polymerase III n=74 Tax=cellular organisms RepID=C6XW17_PEDHD Length = 328 Score = 41.6 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 72/187 (38%), Gaps = 33/187 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + L + DLE TG++ DRI+EIA L + +G + + + + + + Sbjct: 6 KRPLAFFDLETTGVNVGADRIVEIAI------LKAMPDGSELI-----KTMRINPEMPIP 54 Query: 65 THTA--SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFKYM- 120 + + G+ + A+ +E +F+ G + + G NS D L + Sbjct: 55 LYASLIHGIYDEHIANEPIFKEVATELADFI------GDADLAGYNSNRFDIPVLLEEFL 108 Query: 121 -PELEAYFHYR-YLDVSTL---KELARRWKPEILDGFTKQ--GTHQAMDDIRES----VA 169 ++ R ++DV + E R + K H A DI + +A Sbjct: 109 RAGVDFDMSDRKFVDVQNIFHQME-QRTLRAAYKFYCNKDIINAHSAEADITATYQVLLA 167 Query: 170 ELAYYRE 176 ++ Y++ Sbjct: 168 QIERYKD 174 >UniRef50_C9LHX7 Exonuclease n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LHX7_9BACT Length = 256 Score = 41.6 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 59/181 (32%), Gaps = 35/181 (19%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +I+ D+E TGL RDRI+E++ + + +G + L +N Sbjct: 8 RPIIFFDIEATGLQIARDRIVELSYI------KVFPDGRE-----ESKTLR----FNPEM 52 Query: 66 H------TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG-NSIGQDRRFLFK 118 H +G+ + A +E + + G NS D L + Sbjct: 53 HISAEATAVNGIKDEDVADCPTFKEKSGELTAIFQ------SCDLAGFNSNVFDVPMLVE 106 Query: 119 YMPELEAYFH---YRYLDVSTL--KELARRWKPEILDGFTK--QGTHQAMDDIRESVAEL 171 + F + +DV T+ K R K H AM D + + L Sbjct: 107 EFARAGSDFDITKSKLVDVQTIYHKLEPRNLIAAYKFYCNKDLHNAHTAMADTQATYEVL 166 Query: 172 A 172 Sbjct: 167 K 167 >UniRef50_B8FYI4 DNA polymerase III, alpha subunit n=10 Tax=Clostridiales RepID=B8FYI4_DESHD Length = 1447 Score = 41.6 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 22/161 (13%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +DLE TG ++I EI + I+ + + A + + + Sbjct: 427 LDLETTGFSAATEKITEIGIMKIQGG-KIIDQFGCFV-NPEKPIPARVVEV-------TN 477 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYR 130 + + + + L F++ G + N+ D FL L F Y Sbjct: 478 ITDDMVRDAETIDQVFPKILNFIE-----GSVLVAHNA-DFDMGFLKHNAKVLGYDFDYT 531 Query: 131 YLD-VSTLKELARRWKPEILDGFTK------QGTHQAMDDI 164 YLD +S KEL +K L K + H+A+DD+ Sbjct: 532 YLDTLSLAKELFPDYKTYKLGRIAKNLGIKVEVAHRALDDV 572 >UniRef50_Q1DB51 Exonuclease n=3 Tax=Cystobacterineae RepID=Q1DB51_MYXXD Length = 219 Score = 41.6 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 66/179 (36%), Gaps = 41/179 (22%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDA-NLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 L ++DLE TGLD R ++E+A L DA +L +LAE V + H Sbjct: 31 LCFVDLETTGLDASRHEVLEVAVLRVDARSLKVLAE-YEARVKPTRLA---------DAH 80 Query: 67 TASGLVERVKASTMGDREA--ELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + S R+A L + + + + G++ D FL + E Sbjct: 81 PEA--LAVCGYSDEEWRDALPLQEVLATVTPLLAG--TLVAGHNTSFDWGFLVESYRRSE 136 Query: 125 ---AYFHYRYLDVS---------------TLKELARRWKPEILDGFTKQGTHQAMDDIR 165 Y LD + +L LA+R+ G + H+AM D R Sbjct: 137 LALPSVDYHRLDTASLAWPLLATGEVESLSLNALAKRF------GLHRPTPHRAMADAR 189 >UniRef50_C7GFC6 DNA polymerase III, alpha chain n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFC6_9FIRM Length = 226 Score = 41.6 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 32/167 (19%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 DLE TG+ D +IEI+ + V + I+ E + A + Sbjct: 21 DLETTGISSLYDEVIEISAVKVRNG--KIVDEFSELVNPGRPIPYAASS--------VNN 70 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI-GQDRRFLFKYMPELEAYFHY 129 + +++ + + L F AG + G++I G D +FL++ + E YF Sbjct: 71 ISDKMVENARSFEKVLPEFLAF------AGDDVLAGHNIAGFDMKFLYR---DCEKYFGQ 121 Query: 130 RY----LDVSTLKELAR-RWKPEILD------GFTKQGTHQAMDDIR 165 +D + +L WK L G + +G H+A+ D R Sbjct: 122 TLTNDYIDTLAIAKLCFPEWKHRKLSDLAEHYGISTKGAHRALADCR 168 >UniRef50_A1S5S6 DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein n=6 Tax=Shewanella RepID=A1S5S6_SHEAM Length = 228 Score = 41.6 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 30/126 (23%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNIL--AEGPTIAVHQSDEQLALMDD 60 A ++ +DLEMTGLDP RD+I+ I + D + L AE + + S Q A++ Sbjct: 38 AESAPMLALDLEMTGLDPGRDQILAIGVVPIDGGIIQLQGAESVLVEIQGSVGQSAVIH- 96 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLE------FLKQWVPAGKSPICGNSIGQDRR 114 G+ +R + + +A ++ + P D Sbjct: 97 ---------GITDRELHNALPLADAMNWLMQKMNGRILVAHHAP------------LDLA 135 Query: 115 FLFKYM 120 F+ M Sbjct: 136 FIRANM 141 >UniRef50_C0W5G3 Possible DNA polymerase III subunit epsilon (Fragment) n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W5G3_9ACTO Length = 174 Score = 41.6 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 17/26 (65%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDAN 36 +DLE TGL P D I+EI ++T + Sbjct: 52 VDLETTGLSPATDAILEIGLVLTAPD 77 >UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZN4_HALNC Length = 495 Score = 41.6 bits (97), Expect = 0.014, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 6/105 (5%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++ D E TG DP DR I+ A L T+ L + T+ S E L V Sbjct: 3 FLFYDFETTGSDPRCDRPIQFAALRTNDELEPIDSPLTLYATLSPEVLPHPQAVLV---- 58 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD 112 +G++ + AS+ G EAE A L + P G + NS+ D Sbjct: 59 -TGILPQTLASSGGRPEAEFAALIHAEMMQP-GTCAVGFNSLRFD 101 >UniRef50_A6DK72 DNA polymerase III n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK72_9BACT Length = 210 Score = 41.2 bits (96), Expect = 0.016, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 48/131 (36%), Gaps = 28/131 (21%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 ID EMTGL P++D+++ IA + E + Q ++L + Sbjct: 33 IDCEMTGLKPKQDKLLSIAAVKISQGRIQSQESFYRVIFQEKQKLRD----------ETI 82 Query: 71 LVERVKASTMGDREAELATL----EFLKQWVPAGKSPICGNSIGQ---DRRFLFKYMPE- 122 L+ R+ + ++A L +F + +P G D FL MP Sbjct: 83 LIHRLNHEQISTGSDQIAVLKEFSDFCQNCIPVG---------HFFDIDLSFLNPVMPLP 133 Query: 123 -LEAYFHYRYL 132 L + R L Sbjct: 134 FLYPHLDTRLL 144 >UniRef50_B8GAH5 DNA polymerase III, epsilon subunit n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8GAH5_CHLAD Length = 233 Score = 41.2 bits (96), Expect = 0.016, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 12/99 (12%) Query: 3 ANENNLIW-------IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQL 55 A + L W ID+E TGLDP D +I I + + +L + + + Sbjct: 26 APDRRLPWREVPYTVIDVETTGLDPRHDALIAIGAVNVENGRVLLKQTWHSLIRPPPGR- 84 Query: 56 ALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLK 94 + H L E L + Sbjct: 85 EPSVESIRVHH----LTPEELRDAPPPAEVLAELLRLIA 119 >UniRef50_D0I9Y6 DNA polymerase III epsilon subunit n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9Y6_VIBHO Length = 239 Score = 41.2 bits (96), Expect = 0.017, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 36/171 (21%) Query: 11 IDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D E +GLDPE+D+++ + + + + + L+ I V+Q L + H Sbjct: 56 LDFETSGLDPEQDKVLSMGWVEIRQSQIR-LSSARHILVNQP--VLNGYES-ARIHHLRP 111 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 E ++ + + A + +K GK + S+ ++RFL +Y+ HY Sbjct: 112 ---ETLRNCGVSEHHAFSQLFDVMK-----GKVIVAHGSV-IEKRFLARYL-----TLHY 157 Query: 130 RYLDV--------------STLKELARRWK---PEILDGFTKQGTHQAMDD 163 +++ L+++ R W+ G H A++D Sbjct: 158 GQINLPLVWLDTLKIEQYREQLRQVCRDWRLSSVRAAHGLPDYQAHNALND 208 >UniRef50_Q895Z5 DNA polymerase III alpha subunit n=1 Tax=Clostridium tetani RepID=Q895Z5_CLOTE Length = 380 Score = 40.9 bits (95), Expect = 0.018, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 28/168 (16%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQ---SDEQLALMDDWN 62 + + IDLE TGL P D+IIEI + + E ++ ++ +++ Sbjct: 82 DEFVVIDLETTGLYPVTDKIIEITAI--KYKSGQIVEKYNTLINPKINIPKRATEINNIT 139 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 S ++E V L+F+K++ P+ ++ D +FL + Sbjct: 140 NNMVKDSPVIEDVLP----------ELLKFIKEY------PLVAHNASFDIKFLNANLAL 183 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ-------GTHQAMDD 163 + +D L + P K+ +H+A+ D Sbjct: 184 INREIKNVAIDTLQLSRAMYTFLPNHKLTTIKEHLCISEDNSHRALPD 231 >UniRef50_B2Q2X9 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q2X9_PROST Length = 234 Score = 40.9 bits (95), Expect = 0.019, Method: Composition-based stats. Identities = 14/21 (66%), Positives = 17/21 (80%) Query: 11 IDLEMTGLDPERDRIIEIATL 31 IDLE TGLDPE+DRI+ I + Sbjct: 55 IDLETTGLDPEKDRILSIGMV 75 >UniRef50_B7A7U0 Putative PAS/PAC sensor protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A7U0_THEAQ Length = 627 Score = 40.9 bits (95), Expect = 0.019, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 54/170 (31%), Gaps = 47/170 (27%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL----MDDWNVRTHT 67 DLE TGLDP D II + + +L G + H+ E L + + H Sbjct: 447 DLETTGLDPREDAIIALGAV----HLL----GSRVLRHEVYEALVDPGRPIPKASTEVH- 497 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK----YMPEL 123 GL + E A FL+ G + N D FL K P + Sbjct: 498 --GLTWEMLKDKPKLEEVLPAFRAFLE-----GSVLVAHNG-AFDMAFLRKVGIDQPPLV 549 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD 163 + LA P++ D G G H A+ D Sbjct: 550 DTLL------------LAHLLFPDLKDHRLERLAERFGVPVLGRHTALGD 587 >UniRef50_C8NBG4 1-phosphofructokinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBG4_9GAMM Length = 317 Score = 40.9 bits (95), Expect = 0.019, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 17/121 (14%) Query: 67 TASGLVERVKASTM-GDREAELATLEFLKQWVPAGKSPICGNSI--GQDRRFLFKYMPEL 123 ++G + + + E + +++ Q V + + G S+ G D+ + + + Sbjct: 97 GSNGETTDINPAGLFVPEEYQQQLWDYIDQHVGTARVLMMGGSLPAGIDKNLYARIVAKY 156 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTH-------QAM---DDIRESVAELAY 173 F Y +D S+ K L +IL K H + + DI +AE Sbjct: 157 SGKFEYIVVD-SSGKALMETMNADILPDMIKPNIHELQEMCGRELPTDADI---IAEARN 212 Query: 174 Y 174 Y Sbjct: 213 Y 213 >UniRef50_A8V2X6 DNA polymerase III, alpha subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2X6_9AQUI Length = 206 Score = 40.9 bits (95), Expect = 0.020, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 65/186 (34%), Gaps = 40/186 (21%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIA----VHQSDEQLA 56 ++ NE + IDLE TGL + +IE+A + + + I+ + + + + Sbjct: 5 LTVNEATFVIIDLETTGLSASNNSVIEVAAIKYQSGM-IIDQLHHLTKPRENFIPSKVIN 63 Query: 57 LMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL 116 L +G+ + + FLK + + N+ D FL Sbjct: 64 L-----------TGITNAMVIDKPYFEDIYPEVYNFLKDSI-----VVAHNA-KFDISFL 106 Query: 117 FKYMPELEA---YFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDD 163 + + HY D LARR PEI G + H+A+ D Sbjct: 107 SEVHKIVFKNNLRLHYICTD-----NLARRIFPEIQKKSLSSLTNYLGINFKQKHRALSD 161 Query: 164 IRESVA 169 + ++ Sbjct: 162 AQATLQ 167 >UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitrosomonas RepID=Q0AEW3_NITEC Length = 486 Score = 40.9 bits (95), Expect = 0.020, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 48/210 (22%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M + + L W D E +G +P +DR ++ A L TD LN + + I + ++L Sbjct: 1 MRMDTSTLYWHDYETSGANPRQDRPVQFAGLRTDEALNEIGDPLVIYCKPARDRLPH--- 57 Query: 61 WNVRTHTASGLVERVKASTMGDREA------ELATLEFL-KQWVPAGKSPICGNSIGQD- 112 E + + + A E + + Q G + N++ D Sbjct: 58 -----------PEACLLTGITPQMAATRGLPEPEFIALIHAQLAQPGTCGVGYNTLRFDD 106 Query: 113 --------RRFLFKYMPELEA-YFHYRYLDVSTL-----------------KELARRWKP 146 R F Y E ++ + +D++ + K R Sbjct: 107 EVTRFALYRNFYDPYAREWQSGNSRWDVIDLARMTFALRPEGINWPVNGEGKPSFRLEDI 166 Query: 147 EILDGFTKQGTHQAMDDIRESVAELAYYRE 176 +G H A+ D+R ++A R+ Sbjct: 167 TAANGLMHDSAHDALSDVRATIALARLLRD 196 >UniRef50_D0XIW2 DNA polymerase III, epsilon subunit n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XIW2_9CAUL Length = 247 Score = 40.9 bits (95), Expect = 0.020, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 41/174 (23%) Query: 11 IDLEMTGLDPER-DRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 +D E TG DP DR+IE+ + + D L V+ E+L D +R H Sbjct: 7 LDTETTGFDPRTGDRLIEVGCIEILD--LLPTGRTFHRFVNP--ERLIPADA--IRVH-- 58 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK-----YMPEL 123 G+ + + + ++F+ I N+ DR F+ P L Sbjct: 59 -GITDDKVKDAPKFAQIVVDLMDFI-----GDAPVIAHNA-QFDRNFIDHECGRCGHPLL 111 Query: 124 EAYFHYRYLD------------VSTLKELARRWKPEILDGFTKQGTHQAMDDIR 165 R++D ++L L +R+K ++D + H A+ D R Sbjct: 112 HET---RWIDTLQLAQKRFPGMANSLDALCKRYKISLVD----RTLHGALIDAR 158 >UniRef50_B5YGV6 DNA polymerase III alpha subunit n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YGV6_THEYD Length = 230 Score = 40.9 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 19/168 (11%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +E + + +D E+TGL+ RD II I + + + V S ++ Sbjct: 20 SETDFVVVDTELTGLNEFRDNIIAIGAIKMKGRTIKIGDIFYRTVSPSTKKFRK------ 73 Query: 64 RTHTASGLVERVKASTMGD-REAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP- 121 S ++ + S + + E EF+K + + G+ + D FL K + Sbjct: 74 ----ESIMIHEITPSELEKCPQIEPILREFIKF---SKNCLVVGHCVDIDLTFLKKEIRN 126 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVA 169 L F +D L +W + + +++DI S+ Sbjct: 127 NLREIFEPFSIDT----LLIYKWLIKKEILPSDFSNKNSLEDIALSLD 170 >UniRef50_C7G6P2 DNA polymerase III PolC-type n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6P2_9FIRM Length = 228 Score = 40.9 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Query: 7 NLIWIDLEMTGLDPERDRIIEI-ATLVTDANLNILAEGPT 45 +++ D E TGLDPE+D+IIE+ A LVT+ + + + Sbjct: 6 KIVFFDTETTGLDPEKDQIIELAAALVTENGIELKIDAFC 45 >UniRef50_C1SK59 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SK59_9BACT Length = 228 Score = 40.9 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 15/110 (13%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 ID E TGLD RII +A + N I+ ++ E W H Sbjct: 48 IDTETTGLDLNDARIINVAAVKV-QNFKIID-FYNSFINPETEIPKESIQW----HN--- 98 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + + + A E L F+ S I G+ + D + + K M Sbjct: 99 ITDEMVADKPTAGEVLPDFLNFVD------DSIIVGHHVTFDIKMINKEM 142 >UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma RepID=DPO3_UREPA Length = 1442 Score = 40.9 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 13/107 (12%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGL 71 D+E TGL P D IIE ++ N + E + + ++ S Sbjct: 413 DIETTGLFPNFDEIIEFGAVIMQNN-KQIGEKIQFFIKPIQQI----NENVTNLTNIS-- 465 Query: 72 VERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 + + + + ++ A L E + + N I D F+ + Sbjct: 466 -QEMVNNAIDEKTALLKIKEIFDDHI-----LVAHNGINFDINFINQ 506 >UniRef50_A8UVH7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UVH7_9AQUI Length = 215 Score = 40.9 bits (95), Expect = 0.023, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 64/173 (36%), Gaps = 35/173 (20%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 E + D E TGLD R ++ I L V + + N L+E V ++L + V Sbjct: 37 ETTFVVFDTETTGLDLRRAELVSIGALRVVNYSFN-LSESFHRFVKP--KELTRVS---V 90 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H + ++ +E+++ S + G ++ DR+ + KY ++ Sbjct: 91 EIHGIT--PHELEKKAESHDRVLEDFMEYVR------GSVLVGFNVEFDRKIVEKYSLKV 142 Query: 124 --EAYFHYRYLDVSTLKELARRWKP-----------EILDGFTKQGTHQAMDD 163 +YR LDV R WK G G H A+DD Sbjct: 143 LGLPLLNYR-LDV------FRLWKKRGGREGSLKDIAEELGIPVVGAHSALDD 188 >UniRef50_A6D4K1 DNA polymerase III subunit epsilon n=1 Tax=Vibrio shilonii AK1 RepID=A6D4K1_9VIBR Length = 176 Score = 40.5 bits (94), Expect = 0.023, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 13/108 (12%) Query: 11 IDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 +D E T LDP I+ IA N I ++ + + H Sbjct: 1 MDCETTSLDPSVAEIVTIAATKIIDNRIITSDPFEVRLSAPKSLGEDS---VKIHH---- 53 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 + + +++A A L F+ G P+ G I D++ L + Sbjct: 54 ITHDELKHGISEKQAMSALLNFI------GNRPLVGYHIRYDKKILDR 95 >UniRef50_C6LDW1 Helicase, RecD/TraA family n=4 Tax=Clostridia RepID=C6LDW1_9FIRM Length = 1010 Score = 40.5 bits (94), Expect = 0.025, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 61/172 (35%), Gaps = 46/172 (26%) Query: 12 DLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGL 71 DLE TG+ + D +IEI+ + +A + + V+ + +G+ Sbjct: 29 DLETTGISSKYDEVIEISAVKVEAG--QVTGEFSTLVNPGRKIPPAASRV-------NGI 79 Query: 72 VERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFL----FKYMPE----- 122 +++ A + E F +V G + NS D +FL KY + Sbjct: 80 TDKMVAGALPFSEVLGDFFAFAGDFVLVGHNI---NS--FDMKFLYRDAKKYFRKVPDND 134 Query: 123 -----------LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDD 163 L H+R +D+ G + +G H+A++D Sbjct: 135 YVDTLLLARAALPELSHHRLVDL------------AEHYGISAKGAHRALND 174 >UniRef50_A4HVE4 Mitochondrial DNA polymerase I protein B, putative n=3 Tax=Leishmania RepID=A4HVE4_LEIIN Length = 1430 Score = 40.5 bits (94), Expect = 0.026, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 17/25 (68%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATL 31 +++ D+E TGL+P D I+E+A Sbjct: 764 RIVFFDIETTGLNPSTDAIVEVAMF 788 >UniRef50_A6VF58 Exonuclease RNase T and DNA polymerase III n=2 Tax=Methanococcus maripaludis RepID=A6VF58_METM7 Length = 189 Score = 40.5 bits (94), Expect = 0.026, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 16/113 (14%) Query: 9 IWIDLEMTGLDPERDRIIEIATLVTDANLNI-LAEGPTIAVHQSDEQLALMDDWNVRTHT 67 +++D E TGL+P + I +I+ +++D +LNI AE V M+ H Sbjct: 3 VFLDTETTGLEPGQ--IAQISYIISDDDLNIQKAENIYFKV-------NSMETKAQSVHG 53 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 S + + + L+ + Q K IC N + D +FL Sbjct: 54 LSIEKLELLSDGKSFTDHANQILDDIDQ-----KILICHN-VPFDYKFLNSEF 100 >UniRef50_A2CAY4 Possible DNA polymerase III, epsilon subunit n=19 Tax=Cyanobacteria RepID=A2CAY4_PROM3 Length = 321 Score = 40.5 bits (94), Expect = 0.026, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 27/172 (15%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 +S+ L+ ID E TGLDP+R + +E+ ++ H + Sbjct: 84 LSSLPEMLLIIDTETTGLDPKRGQCLEVGAILF---------------HAPQRAVLAQHS 128 Query: 61 W---NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 + S + R+ A + L++ + + A + N+ G DR++ Sbjct: 129 FLLPVETNAAES--INRIPAEVTRLDQPWRQGLDYFQALLDAADLLVAHNA-GFDRQWFG 185 Query: 118 K-YMPELEAYFHYRYLDVSTLKELARRWKPEILD-----GFTKQGTHQAMDD 163 K +P + + D++ + R +P + D G H+A+ D Sbjct: 186 KDQLPAVSKPWLCTMEDIAWPVDRQLRSRPSVRDLALAYGVPVWAAHRALTD 237 >UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3XEM3_9RHOB Length = 459 Score = 40.5 bits (94), Expect = 0.029, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 6/114 (5%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + ++ DLE TG+ PE D+ ++ A + TD N I + L V Sbjct: 2 DFVFYDLETTGISPEFDQPLQFAAIWTDENFVEKD-RVNIRCRLAPHILPSPQALVVTRV 60 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 T L++ S E EF ++W PA + N++ D L + Sbjct: 61 TPDQLID---PSLPSLFEFSQQVAEFTERWAPA--IWVGYNTMKFDEEVLRQTF 109 >UniRef50_A4CKG8 DNA polymerase III, epsilon subunit n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CKG8_9FLAO Length = 222 Score = 40.1 bits (93), Expect = 0.031, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 20/114 (17%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + + +D E TG P+ DRI+ I L V+ + + E+ V Sbjct: 33 DFVVLDTETTGFSPQHDRILSIGALRVSQGRIRVKESLERFV---KQERFDRAS---VPI 86 Query: 66 HT--ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 H +G ERV +REA L+F G+SP+ G+ I D+ + Sbjct: 87 HGILRTGSSERV-----TEREALAELLDF------TGQSPVVGHHISFDQAMIQ 129 >UniRef50_C6SPJ4 DNA polymerase III alpha subunit n=1 Tax=Streptococcus mutans NN2025 RepID=C6SPJ4_STRMN Length = 300 Score = 40.1 bits (93), Expect = 0.032, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 54/172 (31%), Gaps = 27/172 (15%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDA-NLNILAEGPTIAVHQSDEQLALMDD 60 S + + ID+E GLD + IIEI + D L E V + Sbjct: 125 SPSLVPYVVIDIETDGLDENENSIIEIGAVKIDPSQL----EEFNYLVKYDKILPKQIS- 179 Query: 61 WNVRTHTASGLVERVKAST-MGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 +G+ + + + L F+ + G I D +F+ K Sbjct: 180 ------KLTGISQELLDRDGKDLQVVLQEFLNFIGNHD------LVGYGINFDIKFINKK 227 Query: 120 MPELE-AYFHYRYLDVS--TLKELARRWKPEILDGFTK-----QGTHQAMDD 163 + EL R D+ KE ++ + H+A+ D Sbjct: 228 LKELNQPLLKNRVYDLMQYAKKEKLFLDNYKLQTVLKAYEIEDEVPHRALHD 279 >UniRef50_Q084B5 Exonuclease, RNase T and DNA polymerase III n=8 Tax=Shewanella RepID=Q084B5_SHEFN Length = 229 Score = 40.1 bits (93), Expect = 0.032, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQ 54 + L+ IDLEMTGLDP D++I I + + L + + + S Sbjct: 40 DAPLMAIDLEMTGLDPIHDQVISIGLVPIINGVIPLDKAQHMMISISGSV 89 >UniRef50_Q3B459 DNA polymerase III, epsilon subunit n=8 Tax=Chlorobiaceae RepID=Q3B459_PELLD Length = 236 Score = 40.1 bits (93), Expect = 0.033, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 62/165 (37%), Gaps = 41/165 (24%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNI-LAEGPTIAVHQSDEQLALMDDWNVRT 65 ++ D E TG D + D +I I + + L+I +A+ + V Q + Sbjct: 48 RMVVFDTETTGFDLKTDGVISIGAVAING-LSINVADSFEVLVRQDR---VGRSEAVAVH 103 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI------GQDRRFLFKY 119 GL+++ A G+ EA A LE++ G+SI D L + Sbjct: 104 ----GLLKKDIAGGAGEVEAAEAFLEYI------------GSSILVAQHASFDVAMLNR- 146 Query: 120 MPELEAYFHYR----YLDVSTLKELARRWKPEILDGFTKQGTHQA 160 L F R +D ++ LA+R + G H+A Sbjct: 147 --ILSETFRIRLFNGVVDTAS---LAKR----LEKGPYYNLAHKA 182 >UniRef50_Q38W73 DNA polymerase III polC-type n=246 Tax=Bacilli RepID=DPO3_LACSS Length = 1446 Score = 40.1 bits (93), Expect = 0.034, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 32/174 (18%) Query: 12 DLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASG 70 D+E TGL D IIE+A + + D ++A + L+ + + Sbjct: 429 DVETTGLSAVYDSIIELAAVKMRDGE--VVASFDEFI--DPERPLSA---FTTQ------ 475 Query: 71 LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE-AYFHY 129 + + + + E L K++ G + + G+++ D FL + Sbjct: 476 -LTSITNEMVHGAKKEAEVLAMFKEFT--GDAVLAGHNVSFDMGFLNAGYERNDIDLIDN 532 Query: 130 RYLDVSTLKELARRWKPEI----LDGFTKQGT------HQAMDDIRESVAELAY 173 +D EL+R PE LD TK+ H+A D ES L Y Sbjct: 533 PVIDT---LELSRMLHPEYKNHKLDSLTKRYKINLEHHHRANAD-AESTGYLLY 582 >UniRef50_B3RU88 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RU88_TRIAD Length = 289 Score = 40.1 bits (93), Expect = 0.036, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 34/171 (19%) Query: 11 IDLEMTGLDPER-DRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 +D E TGL RIIEI L + D + ++ + H Sbjct: 18 LDTETTGLSVRTGHRIIEIGCLELIDHQ--PTSRTFQCYINPKFPVSERAFEV---HH-- 70 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE--AY 126 L + +F+++ + I N D +F+ +L Sbjct: 71 --LSNKFLEGFPTFDGIVQDFRDFIQE-----DTLIIHNG-HFDIKFINNEFQKLNIPEI 122 Query: 127 FHYRYLD------------VSTLKELARRWKPEILDGFTKQGTHQAMDDIR 165 R +D ++L L R+ +D ++ H A+ D++ Sbjct: 123 SFERVIDTMLMARKLYPRQPASLDSLCDRFN---IDKSSRSLGHGALTDVK 170 >UniRef50_Q0SVV0 Helicase/exonuclease n=12 Tax=Clostridium RepID=Q0SVV0_CLOPS Length = 870 Score = 40.1 bits (93), Expect = 0.036, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 41/183 (22%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 N+I D+E TG+D D II+IA + + N+ ++ + ++ ++ Sbjct: 503 NIIVFDVESTGVDVTEDEIIQIAAIKLNKNVEVVDKFEKFLKNKKS---------VKDSY 553 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM------ 120 G + + E E EF++ + S I G+++ D L + Sbjct: 554 YVHGFSDEMLQRI--GEEKEKVLKEFVEY---SKDSIIVGHNVQYDINILCSELERNNLG 608 Query: 121 -PELEAYFHYRYLDVSTLKELARRWKP-----------EILDGFTKQGTHQAMDDIRESV 168 P+ + + Y LD+ RR+ P ++ D K +H AMDDI + Sbjct: 609 KPKFKTF--YDTLDI------YRRFYPGNINYKLENLSKVYDTKHKP-SHDAMDDIIATG 659 Query: 169 AEL 171 L Sbjct: 660 ELL 662 >UniRef50_B9ZJP8 Exonuclease RNase T and DNA polymerase III n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJP8_9GAMM Length = 246 Score = 40.1 bits (93), Expect = 0.036, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDA 35 + + +DLE TGLDPE D I+ I + D Sbjct: 53 DCRFLAVDLETTGLDPEHDAILSIGWVAMDG 83 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Eutele... 258 8e-68 UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenel... 255 5e-67 UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=... 253 2e-66 UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD3... 253 2e-66 UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms Re... 252 5e-66 UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms Rep... 252 5e-66 UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria R... 250 1e-65 UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=... 250 1e-65 UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms Re... 248 4e-65 UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_B... 242 4e-63 UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_... 242 6e-63 UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturatio... 233 2e-60 UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacteri... 233 2e-60 UniRef50_C5DNN6 KLTH0G18590p n=2 Tax=Saccharomycetaceae RepID=C5... 233 2e-60 UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8 233 2e-60 UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta R... 233 2e-60 UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_X... 232 5e-60 UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria R... 230 2e-59 UniRef50_Q6BKE6 DEHA2F22594p n=4 Tax=Saccharomycetales RepID=Q6B... 229 3e-59 UniRef50_A9F5N7 Oligoribonuclease n=2 Tax=Myxococcales RepID=A9F... 228 4e-59 UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila Re... 228 5e-59 UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=... 228 6e-59 UniRef50_O94626 Probable oligoribonuclease n=1 Tax=Schizosacchar... 228 7e-59 UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER 227 1e-58 UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavisp... 226 2e-58 UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 ... 226 2e-58 UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nucl... 226 3e-58 UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID... 226 3e-58 UniRef50_Q17819 Probable oligoribonuclease n=3 Tax=Caenorhabditi... 225 7e-58 UniRef50_Q22ZB0 Exonuclease family protein n=2 Tax=Oligohymenoph... 225 7e-58 UniRef50_P54964 Oligoribonuclease, mitochondrial n=8 Tax=Sacchar... 224 1e-57 UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces ja... 223 1e-57 UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pedic... 222 6e-57 UniRef50_C7YHK7 Predicted protein n=5 Tax=Sordariomycetes RepID=... 221 1e-56 UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA 220 2e-56 UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms Re... 218 6e-56 UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribon... 217 2e-55 UniRef50_C4YJB7 Oligoribonuclease, mitochondrial n=3 Tax=Sacchar... 216 2e-55 UniRef50_Q8G3N5 Oligoribonuclease n=10 Tax=Bifidobacteriaceae Re... 213 2e-54 UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei Re... 213 2e-54 UniRef50_Q4P645 Putative uncharacterized protein n=3 Tax=Ustilag... 212 5e-54 UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 ... 211 6e-54 UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=... 210 1e-53 UniRef50_Q1CWF9 Oligoribonuclease n=1 Tax=Myxococcus xanthus DK ... 210 2e-53 UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus... 209 4e-53 UniRef50_C7LYK0 Exonuclease RNase T and DNA polymerase III n=1 T... 208 6e-53 UniRef50_A1A0K1 Oligoribonuclease n=8 Tax=Bifidobacterium RepID=... 208 9e-53 UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorp... 203 2e-51 UniRef50_A5E684 Oligoribonuclease, mitochondrial n=1 Tax=Loddero... 202 4e-51 UniRef50_C5KG86 Oligoribonuclease, putative n=2 Tax=Perkinsus ma... 200 2e-50 UniRef50_A7BDJ9 Putative uncharacterized protein n=1 Tax=Actinom... 198 5e-50 UniRef50_C9SMP6 Oligoribonuclease n=1 Tax=Verticillium albo-atru... 195 6e-49 UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes... 193 2e-48 UniRef50_A0BKH9 Chromosome undetermined scaffold_112, whole geno... 193 2e-48 UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycot... 190 2e-47 UniRef50_B6HCA9 Pc18g01380 protein n=1 Tax=Penicillium chrysogen... 189 4e-47 UniRef50_Q6MNB4 Oligoribonuclease n=1 Tax=Bdellovibrio bacteriov... 186 2e-46 UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7... 186 3e-46 UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae... 185 7e-46 UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (B... 183 2e-45 UniRef50_A3D8L9 Exonuclease, RNase T and DNA polymerase III n=4 ... 178 5e-44 UniRef50_Q2HAN9 Putative uncharacterized protein n=1 Tax=Chaetom... 176 4e-43 UniRef50_A4V739 Plant-inducible oligoribonuclease n=2 Tax=Pseudo... 172 5e-42 UniRef50_Q8QNE0 EsV-1-139 n=1 Tax=Ectocarpus siliculosus virus 1... 171 8e-42 UniRef50_A6DMP4 Oligoribonuclease n=1 Tax=Lentisphaera araneosa ... 167 1e-40 UniRef50_B8HIN1 Putative oligoribonuclease n=1 Tax=Arthrobacter ... 160 2e-38 UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1 ... 159 3e-38 UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun seq... 157 2e-37 UniRef50_Q0UIM9 Putative uncharacterized protein n=1 Tax=Phaeosp... 155 5e-37 UniRef50_B5LWG6 Putative oligoribonuclease n=1 Tax=Feldmannia sp... 146 2e-34 UniRef50_Q6XM84 FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus ... 146 2e-34 UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae... 135 6e-31 UniRef50_Q2RJC1 DNA polymerase III, epsilon subunit n=1 Tax=Moor... 126 2e-28 UniRef50_C7TNW1 Putative uncharacterized protein (Fragment) n=1 ... 126 3e-28 UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogac... 126 5e-28 UniRef50_B7GTG1 Putative uncharacterized protein n=2 Tax=Bifidob... 124 2e-27 UniRef50_B6XUS8 Putative uncharacterized protein n=2 Tax=Bifidob... 123 3e-27 UniRef50_A7HNS3 DNA polymerase III, alpha subunit n=2 Tax=Thermo... 122 7e-27 UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamyd... 121 1e-26 UniRef50_C7IIY1 DNA polymerase III, epsilon subunit n=1 Tax=Clos... 120 2e-26 UniRef50_C7G8J4 Putative DNA polymerase III, alpha chain n=1 Tax... 120 2e-26 UniRef50_C0FUI4 Putative uncharacterized protein n=1 Tax=Rosebur... 119 3e-26 UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xa... 119 3e-26 UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas ... 119 4e-26 UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales... 119 5e-26 UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlam... 118 7e-26 UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinel... 118 7e-26 UniRef50_UPI000185C525 DNA polymerase III, epsilon subunit n=1 T... 118 1e-25 UniRef50_B1I276 DNA polymerase III, epsilon subunit n=3 Tax=Bact... 118 1e-25 UniRef50_A9KR66 DNA polymerase III, epsilon subunit n=1 Tax=Clos... 117 2e-25 UniRef50_B3DTZ9 Oligoribonuclease n=2 Tax=Bifidobacterium RepID=... 116 3e-25 UniRef50_C4ZI99 DNA polymerase III, epsilon subunit n=1 Tax=Euba... 116 5e-25 UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae... 115 6e-25 UniRef50_B0MME8 Putative uncharacterized protein n=3 Tax=Clostri... 115 7e-25 UniRef50_A6P0N2 Putative uncharacterized protein n=1 Tax=Bactero... 115 8e-25 UniRef50_C8WX41 Exonuclease RNase T and DNA polymerase III n=3 T... 114 1e-24 UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter... 114 2e-24 UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepI... 113 2e-24 UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Dein... 113 3e-24 UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteo... 113 3e-24 UniRef50_A5UUI5 DNA polymerase III, epsilon subunit n=6 Tax=Chlo... 112 4e-24 UniRef50_Q5KRE9 Probable oligoribonuclease n=2 Tax=Corynebacteri... 112 4e-24 UniRef50_Q3K0L7 Exonuclease, DNA polymerase III, epsilon subunit... 112 5e-24 UniRef50_C8WA42 DNA polymerase III, epsilon subunit n=1 Tax=Atop... 112 6e-24 UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Para... 111 8e-24 UniRef50_D2RJV7 DNA polymerase III, epsilon subunit n=1 Tax=Acid... 111 1e-23 UniRef50_C5B5Z3 Protein with DNA-directed DNA polymerase-like do... 110 2e-23 UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate divisio... 110 2e-23 UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus cap... 110 2e-23 UniRef50_O67074 DNA polymerase III subunit epsilon n=3 Tax=Aquif... 109 4e-23 UniRef50_C2BET5 3'-5' exonuclease and CRISPR-associated Cas2 fam... 109 6e-23 UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC21... 109 6e-23 UniRef50_B4AHF2 DNA polymerase III PolC-type (PolIII) n=1 Tax=Ba... 109 6e-23 UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha ... 108 7e-23 UniRef50_B0P1Y1 Putative uncharacterized protein n=2 Tax=Clostri... 108 8e-23 UniRef50_C0EF57 Putative uncharacterized protein n=1 Tax=Clostri... 108 9e-23 UniRef50_Q0FXM2 Exonuclease, DNA polymerase III, epsilon subunit... 107 1e-22 UniRef50_A9BIM3 DNA polymerase III, alpha subunit n=1 Tax=Petrot... 107 2e-22 UniRef50_A9F4T5 DNA polymerase III, epsilon subunit n=1 Tax=Sora... 106 3e-22 UniRef50_Q03C57 3'-5' exonuclease and CRISPR-associated protein ... 106 3e-22 UniRef50_C1CX37 Putative DNA-directed DNA polymerase (DNA polyme... 106 5e-22 UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cell... 105 7e-22 UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 T... 104 1e-21 UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG en... 104 1e-21 UniRef50_C2CW51 DNA polymerase III n=2 Tax=Bacteria RepID=C2CW51... 104 1e-21 UniRef50_D2RB05 CRISPR-associated endoribonuclease Cas2 n=2 Tax=... 104 2e-21 UniRef50_B9KXZ3 Exonuclease family n=2 Tax=Thermomicrobia (class... 103 2e-21 UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacter... 103 2e-21 UniRef50_C9RRP7 DNA polymerase III, epsilon subunit n=1 Tax=Fibr... 103 2e-21 UniRef50_C4Z427 DNA polymerase n=2 Tax=Bacteria RepID=C4Z427_EUBE2 103 3e-21 UniRef50_A5D2F3 Putative uncharacterized protein n=1 Tax=Pelotom... 103 3e-21 UniRef50_A1VJH5 Exonuclease, RNase T and DNA polymerase III n=8 ... 102 4e-21 UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium... 102 5e-21 UniRef50_C8SCL6 DNA polymerase III, epsilon subunit n=1 Tax=Ferr... 102 5e-21 UniRef50_B0UN90 Exonuclease RNase T and DNA polymerase III n=3 T... 102 6e-21 UniRef50_D0WQJ6 Exonuclease, DNA polymerase III, epsilon subunit... 102 6e-21 UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group... 101 9e-21 UniRef50_A8ES54 DNA polymerase III, epsilon subunit n=4 Tax=Epsi... 100 3e-20 UniRef50_B7V8D9 Probable nuclease n=6 Tax=Pseudomonas aeruginosa... 98 1e-19 UniRef50_B6FWT9 Putative uncharacterized protein n=1 Tax=Clostri... 98 1e-19 UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 2313... 98 1e-19 UniRef50_Q7NC15 PolC n=1 Tax=Mycoplasma gallisepticum RepID=Q7NC... 98 2e-19 UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natr... 98 2e-19 UniRef50_A9VVI2 Exonuclease RNase T and DNA polymerase III n=1 T... 98 2e-19 UniRef50_C2D7T6 3'-5' exonuclease and CRISPR-associated Cas2 fam... 97 3e-19 UniRef50_Q89MS5 Blr4117 protein n=1 Tax=Bradyrhizobium japonicum... 96 5e-19 UniRef50_A5B9I7 Putative uncharacterized protein n=1 Tax=Vitis v... 95 1e-18 UniRef50_A6LV05 Exonuclease, RNase T and DNA polymerase III n=6 ... 95 1e-18 UniRef50_Q3AAH9 Putative DNA polymerase III, epsilon subunit n=1... 95 2e-18 UniRef50_C0ECE2 Putative uncharacterized protein n=1 Tax=Clostri... 94 2e-18 Sequences not found previously or not previously below threshold: UniRef50_C1YUT4 Exonuclease, DNA polymerase III, epsilon subunit... 116 4e-25 UniRef50_Q8XJR3 DNA polymerase III polC-type n=37 Tax=Clostridia... 114 1e-24 UniRef50_Q895K2 DNA polymerase III polC-type n=13 Tax=Clostridia... 111 8e-24 UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitroso... 110 2e-23 UniRef50_C7H779 DNA polymerase III, alpha subunit n=5 Tax=Clostr... 107 1e-22 UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammapr... 107 1e-22 UniRef50_C1DWW1 DNA polymerase III PolC-type (PolIII) n=4 Tax=Hy... 107 2e-22 UniRef50_C7MCE6 Exonuclease, DNA polymerase III, epsilon subunit... 107 2e-22 UniRef50_D0MI24 DNA polymerase III, epsilon subunit n=1 Tax=Rhod... 106 3e-22 UniRef50_B8CW68 DNA polymerase III, alpha subunit n=1 Tax=Haloth... 106 3e-22 UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellul... 106 4e-22 UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Ther... 106 4e-22 UniRef50_C0W351 DNA polymerase III epsilon subunit n=1 Tax=Actin... 106 4e-22 UniRef50_Q67NP5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 106 5e-22 UniRef50_C4LI21 Putative uncharacterized protein n=1 Tax=Coryneb... 106 5e-22 UniRef50_C1DBV5 Probable DNA-directed DNA polymerase III n=1 Tax... 105 6e-22 UniRef50_Q895Z5 DNA polymerase III alpha subunit n=1 Tax=Clostri... 105 6e-22 UniRef50_C5EVY5 DNA polymerase III subunit epsilon n=2 Tax=Clost... 105 8e-22 UniRef50_D1VLC1 DNA polymerase III, epsilon subunit n=1 Tax=Fran... 105 8e-22 UniRef50_D1VSB7 DNA polymerase III, alpha subunit, Gram-positive... 105 9e-22 UniRef50_C7RGM9 DNA polymerase III, alpha subunit n=5 Tax=Anaero... 104 9e-22 UniRef50_C7GFC6 DNA polymerase III, alpha chain n=1 Tax=Roseburi... 104 1e-21 UniRef50_Q1EM31 DNA polymerase III, alpha subunit n=1 Tax=uncult... 104 1e-21 UniRef50_C6LDW1 Helicase, RecD/TraA family n=4 Tax=Clostridia Re... 104 2e-21 UniRef50_C4FGI7 Putative uncharacterized protein n=1 Tax=Bifidob... 104 2e-21 UniRef50_C5SPM0 DNA polymerase III, epsilon subunit n=1 Tax=Asti... 103 2e-21 UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=... 103 2e-21 UniRef50_A5TTA5 DNA-directed DNA polymerase III alpha subunit n=... 103 2e-21 UniRef50_Q2NJG3 DNA polymerase III alpha subunit n=3 Tax=Candida... 103 3e-21 UniRef50_D1AWZ0 DNA polymerase III, alpha subunit n=1 Tax=Strept... 103 3e-21 UniRef50_A7B5W2 Putative uncharacterized protein n=1 Tax=Ruminoc... 103 3e-21 UniRef50_Q8RA32 DNA polymerase III polC-type n=5 Tax=Clostridia ... 103 3e-21 UniRef50_B8FZZ1 DnaQ family exonuclease/DinG family helicase n=2... 103 3e-21 UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacte... 102 4e-21 UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID... 102 4e-21 UniRef50_A7A526 Putative uncharacterized protein n=1 Tax=Bifidob... 102 4e-21 UniRef50_B8FYI4 DNA polymerase III, alpha subunit n=10 Tax=Clost... 102 6e-21 UniRef50_Q10384 Uncharacterized protein Rv2191/MT2247 n=25 Tax=A... 102 7e-21 UniRef50_C5CGL7 DNA polymerase III, alpha subunit n=2 Tax=Thermo... 102 7e-21 UniRef50_C7NEP7 DNA polymerase III, alpha subunit n=5 Tax=Fusoba... 102 7e-21 UniRef50_Q0A6Z2 Putative PAS/PAC sensor protein n=1 Tax=Alkalili... 101 9e-21 UniRef50_UPI0000510268 hypothetical protein BlinB_15797 n=1 Tax=... 101 1e-20 UniRef50_B0S1A9 DNA polymerase III alpha subunit n=3 Tax=Clostri... 101 1e-20 UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacte... 101 1e-20 UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacter... 101 1e-20 UniRef50_A1BCD0 DNA polymerase III, epsilon subunit n=1 Tax=Para... 101 1e-20 UniRef50_A5F9M6 DNA polymerase III, epsilon subunit related exon... 101 1e-20 UniRef50_A5KMD9 Putative uncharacterized protein n=5 Tax=Clostri... 100 2e-20 UniRef50_Q2Z0D2 Rad3-related DNA helicases n=1 Tax=uncultured ca... 100 3e-20 UniRef50_A4J5B5 DNA polymerase III, epsilon subunit n=1 Tax=Desu... 100 3e-20 UniRef50_C7GFY3 DNA polymerase III PolC-type (Fragment) n=3 Tax=... 100 3e-20 UniRef50_C8WWI2 DNA polymerase III, alpha subunit n=2 Tax=Alicyc... 100 4e-20 UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter... 100 4e-20 UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus ... 100 4e-20 UniRef50_A5Z9S3 Putative uncharacterized protein n=1 Tax=Eubacte... 100 4e-20 UniRef50_B9Z6P2 DNA polymerase III, epsilon subunit n=2 Tax=Chro... 100 5e-20 UniRef50_C5CIX0 DNA polymerase III, epsilon subunit n=1 Tax=Kosm... 99 5e-20 UniRef50_C8RRD8 Exonuclease n=2 Tax=Corynebacterium jeikeium Rep... 99 6e-20 UniRef50_C0DA77 Putative uncharacterized protein n=4 Tax=Clostri... 99 6e-20 UniRef50_B3R0M5 DNA polymerase III alpha subunit n=1 Tax=Candida... 99 6e-20 UniRef50_C0FNH3 Putative uncharacterized protein n=2 Tax=Firmicu... 99 7e-20 UniRef50_C1TRP3 Exonuclease, DNA polymerase III, epsilon subunit... 99 7e-20 UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=... 99 8e-20 UniRef50_A5Z7T3 Putative uncharacterized protein n=1 Tax=Eubacte... 99 8e-20 UniRef50_A9AEP6 DNA polymerase III, epsilon subunit n=55 Tax=Bur... 99 8e-20 UniRef50_Q67P96 DNA polymerase III alpha subunit n=2 Tax=Firmicu... 98 1e-19 UniRef50_A4YW65 Putative uncharacterized protein n=2 Tax=Bradyrh... 98 2e-19 UniRef50_B3DQ35 DNA polymerase III alpha subunit n=6 Tax=Bifidob... 98 2e-19 UniRef50_B1GYV2 DNA polymerase III epsilon subunit n=1 Tax=uncul... 97 2e-19 UniRef50_B7CAB9 Putative uncharacterized protein n=1 Tax=Eubacte... 97 2e-19 UniRef50_D0WQL3 Putative DNA polymerase III, epsilon subunit n=1... 97 2e-19 UniRef50_Q8EQD9 ATP-dependent DNA helicase n=3 Tax=Bacillaceae R... 97 2e-19 UniRef50_Q049V0 DNA polymerase III, alpha subunit (Gram-positive... 97 2e-19 UniRef50_Q5P3L6 Nuclease subunit Cho of the excinuclease complex... 97 3e-19 UniRef50_C0WAB0 DNA polymerase III n=1 Tax=Acidaminococcus sp. D... 96 4e-19 UniRef50_Q16B76 Exonuclease, putative n=3 Tax=Roseobacter RepID=... 96 5e-19 UniRef50_Q2KXB5 Putative exonuclease n=4 Tax=Bordetella RepID=Q2... 96 5e-19 UniRef50_A7BDG4 Putative uncharacterized protein n=1 Tax=Actinom... 96 6e-19 UniRef50_A0PN08 DNA polymerase n=1 Tax=Mycobacterium ulcerans Ag... 96 6e-19 UniRef50_UPI0001C36AB7 DNA polymerase III, alpha subunit n=1 Tax... 96 6e-19 UniRef50_B4U7J6 DNA polymerase III, epsilon subunit n=1 Tax=Hydr... 95 8e-19 UniRef50_B4S124 DNA polymerase III, epsilon subunit n=3 Tax=Prot... 95 8e-19 UniRef50_Q73L66 DNA polymerase III domain protein n=2 Tax=Trepon... 95 9e-19 UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Prot... 95 1e-18 UniRef50_C1QET6 Exonuclease, DNA polymerase III, epsilon subunit... 95 1e-18 UniRef50_B1C737 Putative uncharacterized protein n=1 Tax=Anaerof... 95 1e-18 UniRef50_A0QF17 DNA polymerase III, epsilon subunit n=7 Tax=Acti... 95 1e-18 UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Beta... 95 1e-18 UniRef50_B7A7U0 Putative PAS/PAC sensor protein n=1 Tax=Thermus ... 94 2e-18 UniRef50_C6CUG6 DnaQ family exonuclease/DinG family helicase n=4... 94 2e-18 UniRef50_D0MIT4 Putative sensor with HAMP domain n=1 Tax=Rhodoth... 94 2e-18 UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacte... 94 3e-18 UniRef50_C2KW36 Possible DNA-directed DNA polymerase III alpha s... 93 3e-18 UniRef50_O83649 DNA polymerase III subunit epsilon n=2 Tax=Trepo... 93 3e-18 UniRef50_Q83YZ1 DNA polymerase III alpha subunit n=1 Tax=Peanut ... 93 4e-18 UniRef50_O68045 DNA polymerase III subunit epsilon-like protein ... 93 4e-18 UniRef50_A9BFB1 DNA polymerase III, epsilon subunit n=1 Tax=Petr... 93 4e-18 UniRef50_A3X8N6 Exonuclease, DNA polymerase III, epsilon subunit... 93 4e-18 UniRef50_C1SK59 Exonuclease, DNA polymerase III, epsilon subunit... 93 4e-18 UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma... 93 5e-18 >UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Euteleostomi RepID=ORN_HUMAN Length = 237 Score = 258 bits (659), Expect = 8e-68, Method: Composition-based stats. Identities = 89/183 (48%), Positives = 123/183 (67%), Gaps = 4/183 (2%) Query: 1 MSANE---NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL 57 M+A E ++W+DLEMTGLD E+D+IIE+A L+TD++LNILAEGP + + Q DE L Sbjct: 33 MAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDS 92 Query: 58 MDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF 117 M DW H SGL + VK ST+ ++AE L F++Q P G P+ GNS+ +D++FL Sbjct: 93 MSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLD 152 Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGT-HQAMDDIRESVAELAYYRE 176 KYMP+ + HYR +DVST+KEL RRW PE + K+ H+A+DDI ES+ EL +YR Sbjct: 153 KYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRN 212 Query: 177 HFI 179 + Sbjct: 213 NIF 215 >UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DYM7_EIKCO Length = 238 Score = 255 bits (652), Expect = 5e-67, Method: Composition-based stats. Identities = 103/179 (57%), Positives = 136/179 (75%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 N NL W+D+EMTGL+PE DRIIE A ++TDA+LNILA+ + A+HQSDE L MD WN Sbjct: 49 PNPLNLCWLDMEMTGLNPEHDRIIEAAVVITDADLNILAQSESYAIHQSDELLEGMDAWN 108 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 TH +GL +RVK ST+ + E E L+F+ QW+P G SP+CGN++ QDRRF+ +YMP+ Sbjct: 109 TSTHERTGLTQRVKDSTLSEAEVEQRLLDFIAQWIPQGTSPLCGNTVHQDRRFMQRYMPK 168 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 LEA+FHYR LDVSTLKELARRW P F+K+G+H+A+DDI ES+ E +YR+ F++L Sbjct: 169 LEAWFHYRNLDVSTLKELARRWHPAAYKSFSKKGSHRALDDILESIEEFRHYRQTFLRL 227 >UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=ORN_PSEA7 Length = 180 Score = 253 bits (647), Expect = 2e-66, Method: Composition-based stats. Identities = 120/178 (67%), Positives = 142/178 (79%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 N NLIWIDLEMTGLDP+RD IIE+AT+VTD++LN LAEGP IA+HQ +E LA MD+WN Sbjct: 3 NPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVLAGMDEWNT 62 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 R H SGL +RV+ ST+ EAE TL FL+QWVP SPICGNSI QDRRFL+++MP L Sbjct: 63 RQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMPRL 122 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 E YFHYR LDVSTLKELA RW P++ + F K TH A+DDIRES+AEL +YR+HFIKL Sbjct: 123 EGYFHYRNLDVSTLKELAARWAPQVRESFKKGNTHLALDDIRESIAELRHYRDHFIKL 180 >UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD30_ANOGA Length = 228 Score = 253 bits (647), Expect = 2e-66, Method: Composition-based stats. Identities = 90/181 (49%), Positives = 122/181 (67%), Gaps = 2/181 (1%) Query: 1 MS-ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 MS + NL+WIDLEMTGLD E+DRI+EIA +VTD+ LNI+A+GP I +++ D LA M+ Sbjct: 38 MSETSVQNLVWIDLEMTGLDVEKDRILEIACIVTDSKLNIIAKGPNIIINEPDAVLAGMN 97 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 W H+ SGL+E VK ST +AE L+F+K++ P K P+ GNSI DR F+ KY Sbjct: 98 SWCKDHHSKSGLIEAVKKSTYSVDQAERDVLDFVKKYCPERKCPMAGNSIYMDRLFIMKY 157 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREHF 178 MP L Y HYR +DVST+KEL +RW + + K+ H+A+DDI ES+ E+ YY+ F Sbjct: 158 MPTLNEYLHYRVIDVSTVKELCKRWNQNVYNSSPPKKLAHRALDDIEESINEMKYYKSMF 217 Query: 179 I 179 Sbjct: 218 F 218 >UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms RepID=ORN_HAEIG Length = 182 Score = 252 bits (644), Expect = 5e-66, Method: Composition-based stats. Identities = 133/181 (73%), Positives = 156/181 (86%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS ++ NLIWIDLEMTGLDPE++RIIEIAT+VTD NLNILAEGP +AVHQSDE L M+D Sbjct: 1 MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 W +TH+ +GL+ERVKAS + +R AEL TL+FLK+WVP G SPICGNSI QD+RFL KYM Sbjct: 61 WCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P+L YFHYR+LDVSTLKELA RWKPEIL+GF K+ TH A+DDIRES+ ELAYYREHF+K Sbjct: 121 PDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMK 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms RepID=A3JF32_9ALTE Length = 180 Score = 252 bits (643), Expect = 5e-66, Method: Composition-based stats. Identities = 115/179 (64%), Positives = 143/179 (79%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A N L+WIDLEMTGLDPE++RIIE+ATL+TD+ LN++AEGP +AVHQSD + MD+W Sbjct: 2 AKGNRLVWIDLEMTGLDPEQERIIEMATLITDSELNLIAEGPVLAVHQSDTLMGAMDEWC 61 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 RTH SGL +RV S + + EAE TL FL++ + G SP+CGNSIGQDRRFL KYMP+ Sbjct: 62 TRTHGESGLTQRVTDSRISEAEAEQQTLAFLREHLEPGDSPLCGNSIGQDRRFLVKYMPQ 121 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 LE +FHYR LDVST+KELARRW+P++LDG KQG H A+DDIR+S+ EL +YREHF KL Sbjct: 122 LEEFFHYRNLDVSTIKELARRWRPDVLDGVKKQGNHLALDDIRDSINELRHYREHFFKL 180 >UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria RepID=ORN_THICR Length = 184 Score = 250 bits (640), Expect = 1e-65, Method: Composition-based stats. Identities = 106/176 (60%), Positives = 131/176 (74%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +ENNLIWIDLEMTGLD + D+IIEIAT+VTDA LN+LAEGP +A+ L MD W Sbjct: 3 SENNLIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAWCT 62 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +RV+ ST+ +AE T++FLK +VP GKSP+CGNSI QDRRFL + MPEL Sbjct: 63 THHGNSGLTKRVQESTITMAQAEQETIKFLKPYVPKGKSPMCGNSICQDRRFLIEQMPEL 122 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 E +FHYR LDVS+LKELARRW P + G+ K+G H A+DDI ES+ EL YYR++ Sbjct: 123 EQFFHYRNLDVSSLKELARRWAPTVYSGYKKKGAHLALDDIYESIEELKYYRQNLF 178 >UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=ORN_AZOSE Length = 183 Score = 250 bits (640), Expect = 1e-65, Method: Composition-based stats. Identities = 110/181 (60%), Positives = 143/181 (79%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ ++N+LIW+D+EMTGL P+ DRIIEIA ++TD+ LN +AE P IAVHQ D L MD+ Sbjct: 1 MAQDQNHLIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVLDAMDE 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN TH SGL +RVKAS +G+ +AE L FL+Q VPA SP+CGNSI QDRRF+ +YM Sbjct: 61 WNRNTHGKSGLTDRVKASLIGEADAEAQMLAFLQQHVPAHTSPMCGNSICQDRRFMARYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P LEA+FHYR LDVSTLKELA+RW+PE+ G K+G H+A+ DIRES+AEL +YR++F++ Sbjct: 121 PHLEAWFHYRNLDVSTLKELAKRWRPEVYKGVEKKGKHEALADIRESIAELRHYRDNFLR 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms RepID=ORN_COLP3 Length = 181 Score = 248 bits (635), Expect = 4e-65, Method: Composition-based stats. Identities = 103/181 (56%), Positives = 136/181 (75%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ N++NLIW+DLEMTGL+P D I+EIA ++TD+ LNILA+GP A+ Q+D+ L M+ Sbjct: 1 MAGNDSNLIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNP 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 W + H SGL +R + S + A +L F+++WVP GKSP+CGNSIGQDRRF+ KYM Sbjct: 61 WCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P+ E +FHYR LDVST+KELA+RWKPE+L+ K G H A+DDI+ES+AEL YRE F K Sbjct: 121 PDFEDHFHYRNLDVSTIKELAKRWKPEVLESVVKTGAHLALDDIKESIAELKVYRELFFK 180 Query: 181 L 181 L Sbjct: 181 L 181 >UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_BURXL Length = 207 Score = 242 bits (618), Expect = 4e-63, Method: Composition-based stats. Identities = 105/179 (58%), Positives = 137/179 (76%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 + ++ NL+W+D+EMTGL+P+ DRIIEIA +VT++ L+ + EGP +A+HQSDE LA MD Sbjct: 13 LVRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLAGMDQ 72 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN TH SGL++RVKAST+ + +A +FL +VP GKSP+CGNSI QDRRF+ ++M Sbjct: 73 WNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNSICQDRRFMARWM 132 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 PELE +FHYR LDVSTLKEL RRW+P I GF K+ H A+ DI ES+ EL YYREHF+ Sbjct: 133 PELERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESIDELKYYREHFL 191 >UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_ARATH Length = 222 Score = 242 bits (617), Expect = 6e-63, Method: Composition-based stats. Identities = 83/177 (46%), Positives = 113/177 (63%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + L+WIDLEMTGL+ E DRI+EIA ++T+ +L EGP + V Q+ + L MDDW Sbjct: 43 KQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKMDDWCQT 102 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H ASGL ++V S + +REAE +EF+K+ V +G + GNS+ D FL KYMPEL Sbjct: 103 HHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLKKYMPELA 162 Query: 125 AYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 A F + +DVS++K L RW P E K+ H+AMDDIRES+ EL YY++ K Sbjct: 163 ALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYYKKTIFK 219 >UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturation n=5 Tax=Saccharomycetaceae RepID=C4R594_PICPG Length = 213 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 103/180 (57%), Gaps = 1/180 (0%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S + ++WID EMTGLD D I+EI ++TD NL ++ EG +H ++ ++ M++W Sbjct: 32 SPLQQPIVWIDCEMTGLDIYNDHIVEICCIITDQNLEVVDEGYESVIHYDNDVMSKMNEW 91 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 + H SGL ++V ST + E L ++ Q + + GNSI D+ F+++ P Sbjct: 92 CIEHHGTSGLTKKVLESTKTLPQVESELLSYISQHIEPNTGVMAGNSIHMDKFFMYREFP 151 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREHFIK 180 ++ Y YR +DVST+ E+ +R P +L K+ H A DI ES+ +L +++ H++K Sbjct: 152 KVIDYLFYRLIDVSTIYEVCKRHNPALLRTAPRKKAAHTAKADILESIQQLKWFQTHYLK 211 >UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJX7_CORK4 Length = 222 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 83/176 (47%), Positives = 121/176 (68%), Gaps = 2/176 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + ++WID EMTGLDP ++EIA +VTDANLNIL EG I +H +D++LA MDD+ + Sbjct: 23 DRIVWIDCEMTGLDPSTHVLVEIAAIVTDANLNILDEGLDIVIHATDDELAKMDDFVTQM 82 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWV-PAGKSPICGNSIGQDRRFLFKYMPELE 124 HT +GL + ++ ST+ EAE L+++K+WV +P+ GNSI DR+F+ YMP+L+ Sbjct: 83 HTKNGLTDEIRKSTVSVGEAENEVLDYVKKWVNAPRTAPLAGNSIASDRKFIAAYMPKLD 142 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFI 179 + HYR +DVS++KELA RW P++ K+G H+A+ DI+ES+ EL YYR Sbjct: 143 EFLHYRMIDVSSIKELAHRWYPKVYQNQPKKGLAHRALADIKESIRELDYYRRAVF 198 >UniRef50_C5DNN6 KLTH0G18590p n=2 Tax=Saccharomycetaceae RepID=C5DNN6_LACTC Length = 323 Score = 233 bits (595), Expect = 2e-60, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVR 64 ++W+D EMTGLD D IIEI ++TD +LNI+ E G +H + + M++W + Sbjct: 74 RPIVWVDCEMTGLDHVNDHIIEICCIITDGDLNIIDEAGYESVIHCDKKIMDAMNEWCID 133 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPEL 123 H +SGL ++V ST + E L +L++++P K + GNS+ DR F+ + P++ Sbjct: 134 HHGSSGLTQKVLDSTKTTGQVEEELLAYLRKYIPAERKGVLAGNSVHMDRVFMMREFPKV 193 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIK 180 + YR +DVST+ E++ R P++ F K+G H A DI ES+A+L +Y++H++K Sbjct: 194 IDHLFYRIIDVSTIMEVSFRHNPDLASVFPRKKGAHTARADILESIAQLKWYQDHYLK 251 >UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8 Length = 194 Score = 233 bits (595), Expect = 2e-60, Method: Composition-based stats. Identities = 101/176 (57%), Positives = 124/176 (70%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A + LIWIDLEMTGLD +RD IIEIAT+VTDA LN+LAEGP +A+ S E L MD+WN Sbjct: 6 AGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDEWN 65 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 H SGL +RV S + +AE T+ FL +W+ AG SP+CGNSI QDRRFL + M Sbjct: 66 RNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLSEWIRAGASPMCGNSICQDRRFLHRQMSR 125 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 LE YFHYR LDVST+KELARRW P + GF K H A+ D+R+S+ EL +YR+ Sbjct: 126 LERYFHYRNLDVSTIKELARRWAPAVASGFAKSSAHTALSDVRDSIDELRHYRQFM 181 >UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta RepID=Q7XVQ9_ORYSJ Length = 249 Score = 233 bits (595), Expect = 2e-60, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S + L+WIDLEMTGLD +DRI+EIA ++TD L EGP + + QS E + M++W Sbjct: 65 SDYDKPLVWIDLEMTGLDITKDRILEIACIITDGKLTKRIEGPDLVIRQSKECVNDMNEW 124 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 H+ASGL E+V S + + +AE L+F+++++ + I GNS+ D FL KYMP Sbjct: 125 CKVHHSASGLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAGNSVYMDLLFLKKYMP 184 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEILDG-FTKQGTHQAMDDIRESVAELAYYREHFIK 180 L A F + +DVS++ L RW P+ K+ H+AMDDIRES+ EL YY+E+ K Sbjct: 185 HLAAIFSHVIVDVSSISALCSRWFPKERKHAPRKEKNHRAMDDIRESIKELQYYKENIFK 244 >UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_XYLFT Length = 193 Score = 232 bits (592), Expect = 5e-60, Method: Composition-based stats. Identities = 102/175 (58%), Positives = 122/175 (69%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ LIWIDLEMTGLD RD IIEIAT+VTDA LN+LAEGP A+ L MD+WN Sbjct: 10 SDRRLIWIDLEMTGLDTHRDSIIEIATVVTDAQLNVLAEGPEFAISHPLNVLEAMDEWNR 69 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +RV S + +AE +T+ FL+QWV G SP+CGNSI QDRRFL + MP L Sbjct: 70 NQHRHSGLWQRVLNSEIQHAQAEASTIAFLQQWVKIGASPMCGNSICQDRRFLHRQMPCL 129 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 E YFHYR LDVSTLKELA W P ILDG K +H A+ DI +S+AEL +YR+ Sbjct: 130 ERYFHYRNLDVSTLKELAGCWSPSILDGVVKTSSHTALSDIYDSIAELRHYRKSM 184 >UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria RepID=ORN_FRAT1 Length = 178 Score = 230 bits (586), Expect = 2e-59, Method: Composition-based stats. Identities = 94/176 (53%), Positives = 127/176 (72%), Gaps = 2/176 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +NLIWIDLEMTGLD + +I EIA ++TD +LNI+AE IA++Q DE LA M++W ++T Sbjct: 5 DNLIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKT 64 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 HT +GL +RVK S + AE LEF++++VP SP+CGNSI QDRRFL KYMP ++ Sbjct: 65 HTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCGNSIWQDRRFLAKYMPNIDE 124 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 Y HYR LDV+TLK L + W F K+ TH+A+DDIRES+AEL +YR+ + + Sbjct: 125 YCHYRMLDVTTLKLLNQYWGDG--KSFEKKNTHKALDDIRESIAELKFYRQKLLSI 178 >UniRef50_Q6BKE6 DEHA2F22594p n=4 Tax=Saccharomycetales RepID=Q6BKE6_DEBHA Length = 295 Score = 229 bits (585), Expect = 3e-59, Method: Composition-based stats. Identities = 69/178 (38%), Positives = 106/178 (59%), Gaps = 3/178 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVR 64 L+WID EMTGL+ +D IIEI ++TD NL I+ E G V+Q E L M++W V Sbjct: 88 KPLVWIDCEMTGLNVFQDHIIEICCIITDGNLEIIDEKGFESTVYQPKEVLDGMNEWCVN 147 Query: 65 THTASGLVERVKASTM-GDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL ++ + + E LE++KQ+V K + GNSI D+ F+ + P++ Sbjct: 148 QHGKSGLTAKILENPQCELSKIEDELLEYIKQYVQPNKGIMAGNSIHMDKFFMMREFPKI 207 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYREHFIK 180 Y HYR +DVS++ E+ R PE++ F K+ G H A DI ES+ +L +Y+++++K Sbjct: 208 IDYLHYRLIDVSSIMEVGYRHNPELMKLFPKKQGNHTARSDILESINQLKWYKQNYLK 265 >UniRef50_A9F5N7 Oligoribonuclease n=2 Tax=Myxococcales RepID=A9F5N7_SORC5 Length = 187 Score = 228 bits (583), Expect = 4e-59, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 120/180 (66%), Gaps = 1/180 (0%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ ++W+DLEMTGLD I+EIAT+VT+ +L ++AEGP + +HQ + LA M D Sbjct: 1 MTDRSQRMVWVDLEMTGLDESSCAIVEIATIVTEPDLTVVAEGPCLVIHQPESVLAGMSD 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + H SGL+ER++AST+ +AE T FL+ G + +CGNS+ +DR FL +YM Sbjct: 61 FVRDLHERSGLLERIRASTLSVGDAESETRAFLEAHCDKGTAVLCGNSVWKDRAFLQRYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 PEL ++ HYR +DVSTLKEL RRW P + K+ H+A+DDIRES+ EL +YR + + Sbjct: 121 PELLSFLHYRIVDVSTLKELVRRWYP-LRAAPKKREIHRALDDIRESIEELRWYRANVFQ 179 >UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila RepID=ORN_DROME Length = 211 Score = 228 bits (583), Expect = 5e-59, Method: Composition-based stats. Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +++W+DLEMTGLD E+D+I+E+A ++TD +LN+ +EGP A++ E M++W ++ Sbjct: 35 DTDIVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMK 94 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL++R K+S + EA L +L++ +P P+ GNS+ DR F+ K+MP ++ Sbjct: 95 HHYNSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVD 154 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFIK 180 AY HYR +DVST+KELA+RW P ILD K+ TH+++DDIRES+ ELAYY+ + K Sbjct: 155 AYLHYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIKELAYYKANLFK 211 >UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=Q0RPW6_FRAAA Length = 256 Score = 228 bits (583), Expect = 6e-59, Method: Composition-based stats. Identities = 81/176 (46%), Positives = 112/176 (63%), Gaps = 2/176 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + L+WID EMTGLD D ++E+A LVTD+ LNIL EG + + DE L M Sbjct: 16 DRLVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIDLVISAPDEALEAMVPVVREM 75 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELE 124 H +SGL V+AST+ +A+ L++++ VP K+P+CGNSI DR FL +YMP L+ Sbjct: 76 HQSSGLTAAVRASTLTLADAQAQVLDYVRARVPEVRKAPLCGNSIATDRTFLARYMPALD 135 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFI 179 A+ HYR +DVS++KELARRW K+G H+A+ DI+ES+ EL YYR+ Sbjct: 136 AHLHYRMIDVSSIKELARRWYVRTYYAAPVKRGGHRALADIQESIEELRYYRQALF 191 >UniRef50_O94626 Probable oligoribonuclease n=1 Tax=Schizosaccharomyces pombe RepID=ORN_SCHPO Length = 180 Score = 228 bits (582), Expect = 7e-59, Method: Composition-based stats. Identities = 71/181 (39%), Positives = 115/181 (63%), Gaps = 2/181 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS + L+WID EMTGL+ + ++E+A ++TD NL + E + ++QL+ M+D Sbjct: 1 MSNLKQPLVWIDCEMTGLEVGKHVLMEVAAIITDGNLRPVEEKFDAVIKLDEKQLSEMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKY 119 W + H SGL ER + S + ++ E L ++K+++P + + I GNS+ D RFL Sbjct: 61 WCIEQHGKSGLTERCRQSNLTVKDVENQLLAYIKKYIPKKREALIAGNSVHADVRFLSVE 120 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 MP++ + HYR +DVST+KELA+RW P+I + K+G H+A+ DI ES+ EL +YR +++ Sbjct: 121 MPKIIEHLHYRIIDVSTIKELAKRWCPDI-PAYDKKGDHRALSDILESIGELQHYRSYWL 179 Query: 180 K 180 Sbjct: 180 S 180 >UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER Length = 184 Score = 227 bits (579), Expect = 1e-58, Method: Composition-based stats. Identities = 78/177 (44%), Positives = 120/177 (67%), Gaps = 1/177 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +++W+DLEMTGLD E+D+I+E++ ++TD +LN+ +E A++ E M+DW + Sbjct: 8 DTDIVWMDLEMTGLDIEKDKILEVSCIITDKDLNVKSEATCFAINHPQEVYDTMNDWCME 67 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGLV+R K+S + +A L +L++ VP P+ GNS+ DR F+ K MP ++ Sbjct: 68 QHYKSGLVDRCKSSDVKPEQASNLVLSYLERNVPKRACPLGGNSVYMDRLFIRKCMPLVD 127 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFIK 180 Y HYR +DVST+KEL RRW+PE+L K+ TH++MDDI ES+ EL YY+++F K Sbjct: 128 DYLHYRIVDVSTIKELVRRWRPELLSSAPKKTFTHRSMDDIMESINELNYYKKNFFK 184 >UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y8A3_CLAL4 Length = 283 Score = 226 bits (577), Expect = 2e-58, Method: Composition-based stats. Identities = 65/183 (35%), Positives = 108/183 (59%), Gaps = 4/183 (2%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDD 60 +A L+WID EMTGLD +D IIEI ++TD NLNI+ E G V+ + L M++ Sbjct: 29 TALYKPLVWIDCEMTGLDIAKDHIIEICCIITDGNLNIIDEKGYESTVYVPKKVLDSMNE 88 Query: 61 WNVRTHTASGLVERVKAS-TMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFK 118 W V H SGL +V A+ + + L++++ ++P S + GNS+ D+ F+ K Sbjct: 89 WCVNQHGKSGLTAKVLANPQQTLAKVQQELLDYIQFYIPEPRTSLLAGNSVHMDKFFMMK 148 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREH 177 P++ + HYR +DVS++ E+ R P ++ F K+G H A DI ES+ +L +Y+++ Sbjct: 149 EFPQVIDHLHYRLVDVSSIMEVGFRHNPALMKCFPRKKGNHTAKSDILESINQLKWYQDN 208 Query: 178 FIK 180 +++ Sbjct: 209 YLR 211 >UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5BB5 Length = 188 Score = 226 bits (577), Expect = 2e-58, Method: Composition-based stats. Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 3/182 (1%) Query: 1 MSANE--NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALM 58 MS N+ N ++WID+EMTGL E DRI+E+A L+TD NLNI+++ +HQSD++LA M Sbjct: 1 MSNNQRRNRIVWIDMEMTGLAVESDRILEVACLITDENLNIVSDEFHQVLHQSDDELARM 60 Query: 59 DDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 ++W HT SGLVE K S +R + + FL +++P G+ P+ GNS+ DR FL K Sbjct: 61 NEWCQEHHTKSGLVEASKKSQEDERSVDKSLYNFLNKYIPKGRCPMAGNSVYMDRLFLRK 120 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREH 177 YMP Y HYR +DVS++KE+ RRWKPE+ D K+ H+++DDIRES++EL +YR++ Sbjct: 121 YMPTSNEYMHYRIIDVSSIKEVVRRWKPEVHDAAPKKERNHRSLDDIRESISELDFYRKN 180 Query: 178 FI 179 Sbjct: 181 VF 182 >UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nuclease n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792A17 Length = 188 Score = 226 bits (577), Expect = 3e-58, Method: Composition-based stats. Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 1/177 (0%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 NE+N++W D EMTGLD +IE A ++TD NL +LAE P I +HQSD+ L M++W+ Sbjct: 10 NNEHNIVWFDGEMTGLDCNHHTLIEAAIIITDKNLKVLAESPNIIIHQSDKVLENMEEWS 69 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 + H SGL E V+ S + +A+ EF+K + P G P+ GNSI DR F+ KYMP+ Sbjct: 70 KKHHGISGLTENVRKSNISIEQADQMLYEFIKPFAPKGVCPLAGNSIHMDRTFIRKYMPK 129 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHF 178 LE++ YR +DVSTLKEL +RWKPE+ + K G H+A+DDI+ESV EL +Y+ + Sbjct: 130 LESHLSYRLIDVSTLKELLKRWKPELANEVPIKSGKHRALDDIKESVQELQFYKSYL 186 >UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID=ORN_CORGB Length = 219 Score = 226 bits (576), Expect = 3e-58, Method: Composition-based stats. Identities = 85/181 (46%), Positives = 123/181 (67%), Gaps = 2/181 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++A ++ L+W+DLEMTGLD +R I+E+A LVTDANLN+L EG + VH ++E+LA MDD Sbjct: 12 VAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVHATEEELAQMDD 71 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWV-PAGKSPICGNSIGQDRRFLFKY 119 + H +SGL E+++ S + +EAE A L +++ PA +P+ GNSI DR F+ + Sbjct: 72 FVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNSIATDRAFIREQ 131 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHF 178 MP L+ HYR +DVS++KELARRW P + ++G H+A+ DI ES+ EL YYR F Sbjct: 132 MPRLDEALHYRMVDVSSVKELARRWYPRVYYKQPEKGLAHRALADIVESIRELDYYRRSF 191 Query: 179 I 179 Sbjct: 192 F 192 >UniRef50_Q17819 Probable oligoribonuclease n=3 Tax=Caenorhabditis RepID=ORN_CAEEL Length = 193 Score = 225 bits (573), Expect = 7e-58, Method: Composition-based stats. Identities = 86/175 (49%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E +IWID EMTGLD E+ + EIA +VTD+ LN +A GP I +HQ E L M++W Sbjct: 12 EQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRN 71 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 T +GL+E++ AS +AE ++FLK GKSPI GNSI DR F+ KYMP+L+ Sbjct: 72 TFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLD 131 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 + HYR +DVST+K L +RW P+ KQ TH+A DDI ES+AEL YRE Sbjct: 132 KFAHYRCIDVSTIKGLVQRWYPD-YKHPKKQCTHRAFDDIMESIAELKNYRESIF 185 >UniRef50_Q22ZB0 Exonuclease family protein n=2 Tax=Oligohymenophorea RepID=Q22ZB0_TETTH Length = 190 Score = 225 bits (573), Expect = 7e-58, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 3/180 (1%) Query: 5 ENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ L+W D EMTGL+ D+IIEIATL+TD L + +GP + + E L MD+W Sbjct: 11 KDPLLWCDCEMTGLNFLNNDQIIEIATLLTDGELTQVIKGPELIIQAPKELLESMDEWCT 70 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQW-VPAGKSPICGNSIGQDRRFLFKYMPE 122 TH SGL ++V S + + AE ++FLK + ++ + GNSI D +F+ K MP Sbjct: 71 NTHKGSGLYDKVLKSEVTLQMAEEQVIKFLKDNGIEQKEALLAGNSIHADMKFIQKQMPN 130 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFIKL 181 L + HYR +DVST+KEL +RW PEIL K+G H+A+DDI ES+ EL +YR+ K+ Sbjct: 131 LYNFLHYRLVDVSTVKELTKRWNPEILKKAPVKKGGHRALDDILESIEELKFYRKEVFKI 190 >UniRef50_P54964 Oligoribonuclease, mitochondrial n=8 Tax=Saccharomycetaceae RepID=ORN_YEAST Length = 269 Score = 224 bits (571), Expect = 1e-57, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 9/184 (4%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNIL-------AEGPTIAVHQSDEQLALM 58 L+WID EMTGLD DRIIEI ++TD +L + +H E + M Sbjct: 53 KPLVWIDCEMTGLDHVNDRIIEICCIITDGHLAPVKAADGQGDSHYESVIHYGPEVMNKM 112 Query: 59 DDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLF 117 ++W + H SGL +V AS + E LE++++++P + GNS+ DR F+ Sbjct: 113 NEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDKNVGVLAGNSVHMDRLFMV 172 Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKPEI-LDGFTKQGTHQAMDDIRESVAELAYYRE 176 + P++ + YR +DVS++ E+ARR P + K+ H A DI+ES+A+L +Y + Sbjct: 173 REFPKVIDHLFYRIVDVSSIMEVARRHNPALQARNPKKEAAHTAYSDIKESIAQLQWYMD 232 Query: 177 HFIK 180 +++K Sbjct: 233 NYLK 236 >UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JVJ0_SCHJY Length = 187 Score = 223 bits (570), Expect = 1e-57, Method: Composition-based stats. Identities = 73/179 (40%), Positives = 116/179 (64%), Gaps = 2/179 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 +A + L+W+D EMTGL+ +D ++E+A ++TD +LN + E +H D++L M+DW Sbjct: 3 AALRSPLVWVDCEMTGLEVGKDVLMEVAAIITDGDLNPIEEKFEETIHVDDDKLRQMNDW 62 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKYM 120 + H ASGL ER + + E L ++++++P + + I GNS+ D RFL M Sbjct: 63 CIDHHGASGLTERCRQCKQSVNQVEQKLLNYIQKYIPRRREALIAGNSVHADVRFLTVEM 122 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 P++ + HYR +DVST+KEL RRW+P+I F K+ H+A+ DI ES+AEL YYR+H++ Sbjct: 123 PKVIEHLHYRIIDVSTIKELCRRWRPDI-PPFKKRLAHRALSDIEESIAELKYYRQHWL 180 >UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E428 Length = 196 Score = 222 bits (565), Expect = 6e-57, Method: Composition-based stats. Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 1/176 (0%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + IWIDLEMTGL+PE D I+E+A ++T+ +LN L EG +HQ+D L M++W + Sbjct: 21 DRYIWIDLEMTGLNPETDTILEVACIITEPDLNPLNEGMHFVIHQNDNVLKSMNEWCLVH 80 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQW-VPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL+ +AS ++ E ++K G + + GNS+ D FL KYMP + Sbjct: 81 HEKSGLISESRASPHSLKDVEEKLFNYIKSNTFIDGTNYLAGNSVYMDLLFLKKYMPSIP 140 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 + HYR +DVS+LK L W L K+ +H+A+DDI+ S+ EL Y+ K Sbjct: 141 TFLHYRLIDVSSLKVLCNHWYSYELKNCKKEVSHRALDDIKNSIQELKTYKNIAFK 196 >UniRef50_C7YHK7 Predicted protein n=5 Tax=Sordariomycetes RepID=C7YHK7_NECH7 Length = 216 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 107/184 (58%), Gaps = 5/184 (2%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILA-EGPTIAVHQSDEQLALMDD 60 SA+++ L+WID EMTGLD + D I+EI ++T NL IL EG +H +L MDD Sbjct: 14 SASDDPLVWIDCEMTGLDQDNDEILEIYCIITTGNLEILDEEGFHAIIHWPQSRLDQMDD 73 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS-PICGNSIGQDRRFLFKY 119 W +TH SGL V AST EA A +++ +++P + + GNS+ DR FL + Sbjct: 74 WCTKTHADSGLTAAVLASTTTPEEAASALYDYVTRFIPDRRRGLLAGNSVHCDRAFLRRE 133 Query: 120 MPE-LEAYFHYRYLDVSTLKELARRWKPE--ILDGFTKQGTHQAMDDIRESVAELAYYRE 176 + + H+R LDVS++KE ARRW + + K+G H+A DDI ES+ E YYRE Sbjct: 134 PYRKVMKHLHHRILDVSSIKEAARRWCAKRIVNKVPNKKGRHKARDDILESIEEARYYRE 193 Query: 177 HFIK 180 + Sbjct: 194 VIFR 197 >UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA Length = 215 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 82/176 (46%), Positives = 110/176 (62%), Gaps = 2/176 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 L+WID EMTGLD D++IEIA LVTDA+LNIL +G + +H D L+ M D Sbjct: 3 EELVWIDCEMTGLDLGPDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVADM 62 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELE 124 H+ SGL E V+AST+ AE L+++ + V +P+ GNSI DR F+ + MP L+ Sbjct: 63 HSRSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAGNSIATDRSFIARDMPALD 122 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQG-THQAMDDIRESVAELAYYREHFI 179 A+ HYR +DVS++KEL RRW P I G +G H+A+ DI ES+ EL YYR Sbjct: 123 AFLHYRMIDVSSIKELCRRWYPRIYFGQPPKGLAHRALADIHESIRELQYYRRTAF 178 >UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms RepID=ORN_PROAC Length = 202 Score = 218 bits (556), Expect = 6e-56, Method: Composition-based stats. Identities = 79/174 (45%), Positives = 111/174 (63%), Gaps = 3/174 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L+WID EMTGLD D +IE+A LVTD LN+ EG + + + L M+D+ HT Sbjct: 2 LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 61 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELEAY 126 SGL+ + +A+ L++++ +VP GK+P+ GN+IG DR FL K MP+LE+Y Sbjct: 62 TSGLLAE-LDKGLTMAQAQDQVLDYIRTYVPQAGKAPLAGNTIGTDRSFLAKDMPKLESY 120 Query: 127 FHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 HYR +DVS++KELARRW P KQG H+A+ DI+ES+ EL Y+RE + Sbjct: 121 VHYRNVDVSSIKELARRWYPRAFGHSPEKQGNHRALADIQESIEELMYWREVLM 174 >UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribonuclease n=1 Tax=Apis mellifera RepID=UPI0000DB7BA5 Length = 212 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 1/176 (0%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + ++W+D+EM+GLD +I+EIA ++TD NL +++ I +HQSDE L M+DW + Sbjct: 27 KNDYIVWLDMEMSGLDINTSQILEIACVITDKNLKTVSKDLNIVIHQSDEILNNMNDWCL 86 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 TH +GL+ + S + ++AE L++LK +V P+ G+S+ DR FL KYMP + Sbjct: 87 ATHQKTGLIHESRLSKITIQDAEQILLKYLKTYVKEATCPLAGSSVYIDRMFLHKYMPLV 146 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 Y HYR +D ST+KEL +RW I K H+A+ DI+ES+ EL YY+ + Sbjct: 147 NNYLHYRIIDTSTIKELIKRWNINIT-ILKKDHNHRALSDIKESIKELQYYKSNIF 201 >UniRef50_C4YJB7 Oligoribonuclease, mitochondrial n=3 Tax=Saccharomycetales RepID=C4YJB7_CANAL Length = 237 Score = 216 bits (551), Expect = 2e-55, Method: Composition-based stats. Identities = 64/182 (35%), Positives = 106/182 (58%), Gaps = 5/182 (2%) Query: 4 NENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDW 61 + L+W+D EMTGLD D IIEI ++T+ +L+I+ E G ++ +L M++W Sbjct: 25 PKKPLVWVDCEMTGLDVFGDDNIIEICCIITNEDLDIVDENGYESTIYYPKSRLDKMNEW 84 Query: 62 NVRTHTASGLVERVKAST-MGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKY 119 + TH SGL +++ A+ E LE++K++VP + GNS+ DR F+ K Sbjct: 85 CIETHGKSGLTDKILANPDRKLSVVEDELLEYIKKYVPEVRTGLLAGNSVHMDRFFMMKE 144 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYREHF 178 P++ + HYR +DVS++ E R P+++ F K+ G H A DI ES+ +L +YR+++ Sbjct: 145 FPKVIDHLHYRNVDVSSIMEFGYRHNPKLMKMFPKKTGAHTAKSDILESIEQLKWYRKYY 204 Query: 179 IK 180 K Sbjct: 205 FK 206 >UniRef50_Q8G3N5 Oligoribonuclease n=10 Tax=Bifidobacteriaceae RepID=ORN_BIFLO Length = 216 Score = 213 bits (543), Expect = 2e-54, Method: Composition-based stats. Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 4/181 (2%) Query: 2 SANENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 SA ++ LIWID EMTGLD D ++E++ + TD +LN+L EG + S++ + M+D Sbjct: 11 SAKDSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSEKAVNHMND 70 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDRRFLFKY 119 + + HT SGL+ + + EAE E++ ++ P G P+ GN+IG D++FL Y Sbjct: 71 FVRQMHTRSGLINEW-ENGLSLAEAEQKVTEYVLRFTPEGVRPLLAGNTIGSDKKFLDHY 129 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDG-FTKQGTHQAMDDIRESVAELAYYREHF 178 MP L ++ HYR +DVST KELARRW P + + K G H+A+ DI ES+ EL YYR+ F Sbjct: 130 MPNLMSHLHYRSVDVSTFKELARRWYPAVYENRPPKNGGHRALADIIESLDELRYYRKAF 189 Query: 179 I 179 + Sbjct: 190 M 190 >UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei RepID=ORN_TROWT Length = 184 Score = 213 bits (543), Expect = 2e-54, Method: Composition-based stats. Identities = 82/180 (45%), Positives = 119/180 (66%), Gaps = 3/180 (1%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ ++L+W+D EMTGL+PERD ++E+A +VTD +L L EG + V S E L MD+ Sbjct: 3 VAPTPSHLVWVDCEMTGLNPERDELLEVAVVVTDKDLLPLDEGVNVVVSPSSEALGAMDN 62 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + R H SGL++ ++ + EA+ E++ + V G + GNSI DR F+ +YM Sbjct: 63 YVARMHRVSGLLDE-LSNGVPVSEAQAMVKEYITKHVKTGG-IMSGNSIATDRLFITRYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESVAELAYYREHFI 179 P++ A HYR +DVS++KELA RW PEI G K+G H+AM D+ ES+AELAYYREHF+ Sbjct: 121 PDVHAILHYRMIDVSSIKELAVRWAPEIYSGAPNKKGGHRAMADVLESIAELAYYREHFL 180 >UniRef50_Q4P645 Putative uncharacterized protein n=3 Tax=Ustilaginomycotina RepID=Q4P645_USTMA Length = 606 Score = 212 bits (540), Expect = 5e-54, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 9/189 (4%) Query: 1 MSANENNLIWIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 +SA++ L+WID EMTGL E DR++EIA ++TD LN + G + + L M+ Sbjct: 416 LSASDGPLVWIDCEMTGLSVENGDRLLEIACIITDGQLNPIDSGVSYVISTPQSVLDGMN 475 Query: 60 DWNVRTHTASGLVERVKASTMG--DREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFL 116 W V H SGL + A L +++ +P + + GN++ D+ FL Sbjct: 476 HWCVNQHALSGLTAECLDANRSYPHASVRTAILAYVRDRIPTPNTACLAGNTVHADKAFL 535 Query: 117 FKYMPELEAYFHYRYLDVSTLKELARRWKPEILDG-----FTKQGTHQAMDDIRESVAEL 171 MPEL + HYR +DVS++KEL +RW + H+A++DI S+ EL Sbjct: 536 HAEMPELIHHLHYRIVDVSSIKELVKRWYGDNKLWNPSEPPKHMPNHRALNDINASIQEL 595 Query: 172 AYYREHFIK 180 +YR + Sbjct: 596 KWYRSEVFQ 604 >UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia vitripennis RepID=UPI00015B53D6 Length = 185 Score = 211 bits (539), Expect = 6e-54, Method: Composition-based stats. Identities = 64/175 (36%), Positives = 108/175 (61%), Gaps = 1/175 (0%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + +IWIDLEMTGL+ +D+I+E+A+++TD LNI+++ + +HQS++ M W Sbjct: 10 DRIIWIDLEMTGLNVMQDKILEVASIITDDQLNIVSDEFQMVIHQSEDVFETMIPWCQEQ 69 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 H +GL+E + S + AE + F +++VP P+ G+ + DR FL ++MP + Sbjct: 70 HNKTGLIEASRNSIFNEEMAEEELIRFFRKYVPHNTCPLAGSCLYMDRAFLQQHMPRVFE 129 Query: 126 YFHYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHFI 179 Y +DVS++ ELA+RW +I K G H+A+ DI++S+ EL+YYR++ Sbjct: 130 YLGDEVIDVSSINELAKRWNKKIERKKQRKTGDHRALGDIKDSIEELSYYRKNIF 184 >UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=D1NUV9_9BIFI Length = 219 Score = 210 bits (536), Expect = 1e-53, Method: Composition-based stats. Identities = 83/180 (46%), Positives = 117/180 (65%), Gaps = 3/180 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 SA ++ LIWID EMTGLD D + E++ + TD LN+L EG + S + + M+D+ Sbjct: 11 SAQQSRLIWIDCEMTGLDIFHDELCEVSVVPTDFELNVLDEGIDFVIKPSKDAVDHMNDF 70 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAG-KSPICGNSIGQDRRFLFKYM 120 HT SGL+ + M +EAELA ++++K++ P G K + GNSIG D++FL +YM Sbjct: 71 VRAMHTRSGLITEW-ETGMDVKEAELAVIDYVKKFTPEGVKPLLAGNSIGSDKKFLDRYM 129 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHFI 179 P L + HYR +DVSTLKELARRW P++ + K G H+A+ DI ES+ EL YYRE F+ Sbjct: 130 PGLMEHLHYRVVDVSTLKELARRWYPQVYMNRPAKNGGHRALADIIESLDELRYYREAFM 189 >UniRef50_Q1CWF9 Oligoribonuclease n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CWF9_MYXXD Length = 183 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 1/180 (0%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M ++E +W+DLEMTGLDPE IIE+ ++T +L +AE + Q +E L M+ Sbjct: 1 MISSEQRFVWLDLEMTGLDPETCSIIEVGVIITGPDLRPIAE-IERVIWQPEEVLLRMEP 59 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 HT + L+E+V+AS R AE + + + G+ + GNSI DRRFL +YM Sbjct: 60 VVREMHTRNELLEKVRASNTSLRVAERDVMALVTEHCALGEGILAGNSIHTDRRFLIRYM 119 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 P LE Y HYR +DV++LK L R W P +++ H A+ D+R S++EL YYR+ + Sbjct: 120 PLLERYLHYRMVDVTSLKVLTRAWYPNLVEPRKAPSGHTALADVRASISELQYYRDTLFR 179 >UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus clemensi RepID=C1C170_9MAXI Length = 230 Score = 209 bits (532), Expect = 4e-53, Method: Composition-based stats. Identities = 65/181 (35%), Positives = 103/181 (56%), Gaps = 3/181 (1%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S N L+WID EMTGLD E+D ++E+A +VTD++L + G + +HQ D L M ++ Sbjct: 48 STNLRRLVWIDCEMTGLDIEKDVLMEVAVIVTDSSLREVTPGINLIIHQPDSILNAMTEF 107 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVP--AGKSPICGNSIGQDRRFLFKY 119 +H +GL E +AS + R AE ++Q + G + GNS+G D +FL KY Sbjct: 108 PEESHALTGLTEACRASQIDLRNAEDQICRHIRQGLSGTTGTPLLAGNSVGHDLKFLQKY 167 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGT-HQAMDDIRESVAELAYYREHF 178 MP ++ HY+ LDVS++ + W +L K+ H+AM+DI+ES+ E+ ++ Sbjct: 168 MPAVKDLLHYKILDVSSINSCYQLWNKSVLHQCPKKKRLHRAMEDIKESIEEMKVLKDIM 227 Query: 179 I 179 Sbjct: 228 F 228 >UniRef50_C7LYK0 Exonuclease RNase T and DNA polymerase III n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYK0_ACIFD Length = 188 Score = 208 bits (531), Expect = 6e-53, Method: Composition-based stats. Identities = 88/175 (50%), Positives = 125/175 (71%), Gaps = 2/175 (1%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L W+DLEMTGLDPER I+EIA +VTD L +AE + +H +DE+LA+M+ V+ H+ Sbjct: 2 LAWMDLEMTGLDPERCVILEIAAIVTDDELETVAELGPLVLHATDEELAVMEPVVVQMHS 61 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEAY 126 A+ L+E V+ +++ EAE L FLK +P + P+CGNSIG DRRFL ++MP++EA Sbjct: 62 ANHLLEDVRRASLTIDEAESTVLAFLKAHLPDPHQVPLCGNSIGTDRRFLARHMPKVEAL 121 Query: 127 FHYRYLDVSTLKELARRWKPEILDG-FTKQGTHQAMDDIRESVAELAYYREHFIK 180 HYR +DVS+LKELARRW PE+++ K H+A+DD+R+S+AEL YYR ++ Sbjct: 122 LHYRSIDVSSLKELARRWYPEVIEHMPQKNPAHRALDDVRDSIAELRYYRSSMLR 176 >UniRef50_A1A0K1 Oligoribonuclease n=8 Tax=Bifidobacterium RepID=A1A0K1_BIFAA Length = 217 Score = 208 bits (529), Expect = 9e-53, Method: Composition-based stats. Identities = 76/181 (41%), Positives = 112/181 (61%), Gaps = 4/181 (2%) Query: 2 SANENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ + LIWID EMTGLD D ++E++ + TD +LN+L EG + S + + M+D Sbjct: 11 TSEGSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKPSQKAVDHMND 70 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAG-KSPICGNSIGQDRRFLFKY 119 + HT SGL+ + EA+ +E+++++ PAG K + GN+IG D++FL Y Sbjct: 71 FVRAMHTRSGLINEW-EHGLSLDEAQAKVIEYVRKFTPAGVKPLLAGNTIGSDKKFLDHY 129 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHF 178 MPEL HYR +DVST KELARRW P + + K G H+A+ DI ES+ EL YYR+ F Sbjct: 130 MPELMENLHYRTIDVSTFKELARRWYPAVYLNRPPKNGGHRALADIIESLDELRYYRKAF 189 Query: 179 I 179 + Sbjct: 190 M 190 >UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorpha longicaudata entomopoxvirus RepID=Q8B5Y0_9POXV Length = 206 Score = 203 bits (517), Expect = 2e-51, Method: Composition-based stats. Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 2/175 (1%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 NN+ W+DLEMTGLDPE D I+EI +T+ L I + + +H SD+ L MD W +T Sbjct: 29 NNIAWLDLEMTGLDPETDNILEIGCFITNDALEITSPIFHMIIHNSDDILKSMDKWCKKT 88 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS-PICGNSIGQDRRFLFKYMPELE 124 HT +GL+ V S AE ++F K + K+ + GNSI D+ FL ++MP L Sbjct: 89 HTKNGLITEVMNSKTSLEVAEKKLIQFFKAHASSDKAIILAGNSIYIDKGFLCEHMPRLY 148 Query: 125 AYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR +DVS+ E+ +R P + K+ H+A++DI++S+AE+ YY+ Sbjct: 149 PMLHYRVIDVSSFAEIFKRVNPQKYAQRPKKRCIHRAVNDIKDSLAEMQYYKSFI 203 >UniRef50_A5E684 Oligoribonuclease, mitochondrial n=1 Tax=Lodderomyces elongisporus RepID=A5E684_LODEL Length = 269 Score = 202 bits (514), Expect = 4e-51, Method: Composition-based stats. Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 6/184 (3%) Query: 4 NENNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEG--PTIAVHQSDEQLALMDD 60 + L+W+D EMTGLD DRIIEI +VTD NL +L G ++ E L MD+ Sbjct: 73 PKRPLVWVDCEMTGLDVLGEDRIIEICCIVTDENLEVLGNGDYYESTIYYPQETLDKMDE 132 Query: 61 WNVRTHTASGLVERVKAST-MGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFK 118 W TH GL++R+ + + + LEFLK+++ + GNS+ D+ F+ K Sbjct: 133 WCQTTHGQLGLIQRILDNPDRTLEKVQAELLEFLKKYISGPKIGIMAGNSVHMDKFFMMK 192 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPEILD-GFTKQGTHQAMDDIRESVAELAYYREH 177 MPE+ + HYR LDVS++ E +R P+++D K +H A DI ES+A+L ++RE+ Sbjct: 193 DMPEIVEFLHYRLLDVSSIMEFGKRHAPKLMDLQPDKIQSHTAKSDILESIAQLKWFREN 252 Query: 178 FIKL 181 + KL Sbjct: 253 YFKL 256 >UniRef50_C5KG86 Oligoribonuclease, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KG86_9ALVE Length = 204 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 81/188 (43%), Positives = 118/188 (62%), Gaps = 14/188 (7%) Query: 3 ANENNLIWIDLEMT------GLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLA 56 N+ L+W+D EMT G+ E DR++E+A +VTD +LN+L EGP + +HQ E L Sbjct: 7 TNDGVLLWVDCEMTNLGDAYGVLGETDRLLEVALIVTDKHLNVLHEGPDLVIHQPTEVLN 66 Query: 57 LMDDWNVRTHT-ASG------LVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI 109 M+DW + +G L E V ST+ + EA+ E ++V G+ + GN++ Sbjct: 67 GMNDWCRKQFGWKNGQPVPAMLAEEVLKSTISEGEADRQLAEVAAEFVKEGQGLLAGNTV 126 Query: 110 GQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFT-KQGTHQAMDDIRESV 168 D+RFL KYMP Y HYR LDVST+KELA+RW PE L+ FT K+ TH+A++DI++S+ Sbjct: 127 HVDKRFLEKYMPRFSGYLHYRVLDVSTIKELAKRWDPETLEAFTGKRATHRALEDIQDSI 186 Query: 169 AELAYYRE 176 EL +YR+ Sbjct: 187 NELKHYRD 194 >UniRef50_A7BDJ9 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDJ9_9ACTO Length = 198 Score = 198 bits (505), Expect = 5e-50, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 2/167 (1%) Query: 15 MTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVER 74 MTGLD +RD +IE+A +VTD +L I+ G + + E L M+D+ HT+SGL++ Sbjct: 1 MTGLDVQRDALIEVAVVVTDGDLTIVDPGMDVLITPPAEALDNMNDFVRNMHTSSGLLDD 60 Query: 75 VKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLD 133 ++ S + EA L ++K++VP GK+ + GNS+G D+ FL MP + + HYR +D Sbjct: 61 LQTSGVSMEEATEQVLSYIKRFVPQQGKALLAGNSVGTDKMFLEANMPSVIDHLHYRLVD 120 Query: 134 VSTLKELARRWK-PEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 VS++KELA+RW + K G H+A+ DI ES+ EL YYR Sbjct: 121 VSSIKELAKRWYRVAFAESPDKHGGHRALADILESIQELEYYRRVLF 167 >UniRef50_C9SMP6 Oligoribonuclease n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SMP6_VERA1 Length = 212 Score = 195 bits (496), Expect = 6e-49, Method: Composition-based stats. Identities = 65/170 (38%), Positives = 93/170 (54%), Gaps = 5/170 (2%) Query: 15 MTGLDPERDRIIEIATLVTDANLNILA-EGPTIAVHQSDEQLALMDDWNVRTHTASGLVE 73 MTGLDP+ + I+EI ++T NL L G + VHQ +L M +W H +GL E Sbjct: 16 MTGLDPDTEEILEIHCIITTGNLEPLDGPGWGVVVHQPASRLDQMGEWCTDMHAKTGLTE 75 Query: 74 RVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMPELE-AYFHYRY 131 V AST ++A L ++++VP + GN++ DR FL K + H+R Sbjct: 76 AVLASTTTPQQAAEGLLAHIRKYVPTPKVGLLAGNTVHADRGFLAKQPYTPIVEHLHHRI 135 Query: 132 LDVSTLKELARRWKPE--ILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 +DVS+LKE A+RW P + K GTH+ +DI+ES+AE YYRE Sbjct: 136 VDVSSLKEAAKRWCPREIVEGAPVKTGTHRGREDIKESIAEARYYREVIF 185 >UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q099_IXOSC Length = 171 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 71/138 (51%), Positives = 92/138 (66%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N L+WIDLE+TGL+ E +I+EIA LVTD LN+L+EG IA+HQ DE L M+DW Sbjct: 34 NNGLVWIDLELTGLELETCKIMEIACLVTDGQLNLLSEGIDIAIHQPDEVLEGMNDWCKE 93 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H SGL + + S++ EAE L + Q VP GK + GN++ DR FL +YMPEL Sbjct: 94 HHGKSGLTQACRESSVTVEEAEQRVLSLVSQLVPPGKCHLAGNTVYMDRLFLARYMPELN 153 Query: 125 AYFHYRYLDVSTLKELAR 142 +Y HYR +DVST+KEL R Sbjct: 154 SYLHYRIVDVSTVKELCR 171 >UniRef50_A0BKH9 Chromosome undetermined scaffold_112, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BKH9_PARTE Length = 174 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 62/160 (38%), Positives = 95/160 (59%), Gaps = 2/160 (1%) Query: 22 RDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMG 81 DR+ + A ++TD L + +GP I +H + L MD+W TH ASGL + ST+ Sbjct: 10 NDRVEQCACILTDYKLKTIIKGPHIVIHADKQVLDGMDEWCTTTHKASGLYQESLNSTVT 69 Query: 82 DREAELATLEFLKQ-WVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKEL 140 +A+ L+FL Q +P P+ GNS+ DR F+ K+MP+L+ + HYR +DVS++K L Sbjct: 70 VGQAQEQILQFLNQNNIPPKVLPLAGNSVYMDRLFVMKHMPQLDQFLHYRIVDVSSIKLL 129 Query: 141 ARRWKPEIL-DGFTKQGTHQAMDDIRESVAELAYYREHFI 179 + P + K+ H+A+DDI ES+ EL YY+E F+ Sbjct: 130 CQNLNPIVCSQQPQKKLNHRALDDILESIEELRYYQEKFM 169 >UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycotina RepID=Q5KPH7_CRYNE Length = 184 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 6/169 (3%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ L+W+D EMTGLD DRIIEIA ++TD LN + G + + E L M DW Sbjct: 9 DDGPLVWVDCEMTGLDFLNDRIIEIAVIITDGRLNPVDGGISYIIKTPKEVLDNMGDWCR 68 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPE 122 H SGL++ S L+++++W+P G + G+S+ D RF+ MPE Sbjct: 69 EQHGKSGLIQACLDSPYSYDTVVEKVLDYIRRWIPERGAGLLAGSSVHADMRFMLMGMPE 128 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTK----QGTHQ-AMDDIRE 166 + + YR LDVS++KE+ RRW P++ + + +H+ + D+ Sbjct: 129 VMKHLSYRILDVSSVKEICRRWYPKVRAQEQESRTTECSHRYVLLDLEA 177 >UniRef50_B6HCA9 Pc18g01380 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HCA9_PENCW Length = 245 Score = 189 bits (480), Expect = 4e-47, Method: Composition-based stats. Identities = 64/170 (37%), Positives = 94/170 (55%), Gaps = 5/170 (2%) Query: 15 MTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTHTASGLVE 73 MTGL+PE D+I++I +TDA LN+L G +H D L M W + TH +GL Sbjct: 75 MTGLNPETDKILQICCFITDAQLNLLEPTGFETVIHVPDSTLDAMSQWCIDTHGRTGLTA 134 Query: 74 RVKASTMGDREAELATLEFLKQWVP-AGKSPICGNSIGQDRRFLFKYMP-ELEAYFHYRY 131 V+AST A + L +++Q VP + + GNS+ D+ FL ++ + HYR Sbjct: 135 AVRASTTSPSTAADSLLAYIRQHVPTPRTALLAGNSVHADKAFLACAPYSQVLDHLHYRI 194 Query: 132 LDVSTLKELARRWKPE--ILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 LDVS+LKE ARRW + + K+ H A DDI ES+ E+ +Y++ Sbjct: 195 LDVSSLKEAARRWGSDQLLEQVPRKREVHLARDDILESIEEIRFYKDKLF 244 >UniRef50_Q6MNB4 Oligoribonuclease n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNB4_BDEBA Length = 175 Score = 186 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 70/175 (40%), Positives = 96/175 (54%), Gaps = 7/175 (4%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N L WID+EMTGLD E++ IIE+A +VTD N L E V Q + L MD WN Sbjct: 2 NKLFWIDMEMTGLDVEKEVIIEVAAIVTDLNFKEL-ETFETVVKQPQKYLDSMDAWNTEH 60 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWV--PAGKSPICGNSIGQDRRFLFKYMPEL 123 H SGL +V + M + E ++ +K+ P K + GNSI QDR F+ KYMPE Sbjct: 61 HKKSGLTAKV-PNGMDPDQVEAKLVDMVKKHFPDPKDKPVLAGNSIMQDRLFINKYMPEF 119 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR +DVS+ K + + + K H+A++DIRES+ EL +Y + Sbjct: 120 AGRLHYRMVDVSSWKVI---INNKFKYVYQKANKHRALEDIRESIQELRHYTDKM 171 >UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7 RepID=A5KRR8_9BACT Length = 184 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 5/169 (2%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 L+W+DLEMTGLDP+RDR++E+A + TD N +A VHQS + L LMDDW H Sbjct: 12 KLLWLDLEMTGLDPQRDRVLEVAAIATDWNFEEMAV-IESVVHQSPKVLDLMDDWVRSQH 70 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKS-PICGNSIGQDRRFLFKYMPELEA 125 +SGL ERV+AS + + +AE L+F+ G + GNSI QDRRF+ +Y L+A Sbjct: 71 ASSGLTERVRASDVSETDAEDILLQFIDSVYKDGDPVVLAGNSIHQDRRFIRQYWQRLDA 130 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYY 174 HYR LDVS K + ++ + F K H+A++DIR S+ EL YY Sbjct: 131 RLHYRMLDVSAWKVV---FEGKYQKRFPKPEDHRALEDIRGSIMELKYY 176 >UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFP7_9BACT Length = 193 Score = 185 bits (469), Expect = 7e-46, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 98/176 (55%), Gaps = 6/176 (3%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ WIDLEMTGLDP DRI+E A ++T+ L + E AV Q E L M+DW Sbjct: 2 SKRRYCWIDLEMTGLDPATDRIVEAAVIITNKQLEPVFE-WESAVRQPQEVLEGMNDWCK 60 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGK-SPICGNSIGQDRRFLFKYMPE 122 H SGL++R+ + + E + E ++ I GNSI QDR+F+ +Y+P+ Sbjct: 61 HHHAESGLLDRI-QDGITEEELDDKLAEITLKYFKKNNPCVIAGNSIAQDRKFIDRYLPK 119 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR LDVS+ K + R + F K+ +H+A+DDIRES+AEL +Y Sbjct: 120 FSERIHYRMLDVSSFKIVFREM---LGREFKKENSHRALDDIRESIAELKHYMTAI 172 >UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (Baizongia pistaciae) RepID=ORN_BUCBP Length = 160 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 91/155 (58%), Positives = 117/155 (75%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ + NLIWIDLEMTGL+P +IIEIATL+TD NL IL+ GP IA++Q++ QL+ MD Sbjct: 1 MNTDIKNLIWIDLEMTGLNPNIHKIIEIATLITDKNLKILSYGPVIAIYQNNHQLSFMDP 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 WN + HT +GL+ R+K S + AE+ T+ FLK+WVP SP+CGNSI DR+FLFKYM Sbjct: 61 WNNKMHTKNGLITRIKNSLYTEHLAEIKTITFLKKWVPKNTSPMCGNSISTDRQFLFKYM 120 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQ 155 P LE YFHYR +DVST+KELA RWKP+I + K+ Sbjct: 121 PTLEKYFHYRQIDVSTIKELALRWKPKIYNKLKKK 155 >UniRef50_A3D8L9 Exonuclease, RNase T and DNA polymerase III n=4 Tax=Shewanella baltica RepID=A3D8L9_SHEB5 Length = 204 Score = 178 bits (453), Expect = 5e-44, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 99/193 (51%), Gaps = 18/193 (9%) Query: 5 ENNLIWIDLEMTGLDPERDR---------IIEIATLVTDANLNILAEGPTIAVHQSDEQL 55 E ++ DLE GL+ D I E+A +VTD+ LN + E + VHQ DE + Sbjct: 2 EQFFLFGDLETGGLNGRLDNGMLGMEYYPIFELAFIVTDSELNQVGEALHVVVHQDDEHI 61 Query: 56 ALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGK-------SPICGNS 108 A +W + HT SGL+ V+AS++ +AE +E LK GNS Sbjct: 62 ARSHEWAIDVHTKSGLLAAVRASSVSLAQAEQMVIEHLKALGIPKHDRKAKTGVVFAGNS 121 Query: 109 IGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGF--TKQGTHQAMDDIRE 166 I DR F+ MPEL Y HYR LD+S L AR W PE+ KQ H+A+ DIRE Sbjct: 122 IMFDRSFIMCQMPELHEYMHYRQLDISALGLAARAWAPEVERNAIKAKQYQHEALADIRE 181 Query: 167 SVAELAYYREHFI 179 S+AEL YYR+ Sbjct: 182 SIAELKYYRDELF 194 >UniRef50_Q2HAN9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HAN9_CHAGB Length = 228 Score = 176 bits (446), Expect = 4e-43, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 95/219 (43%), Gaps = 55/219 (25%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVR 64 + L+WID EMTGLDPE D IIEI ++TD L +L E G VHQ+ E++ +MD+W R Sbjct: 17 DPLVWIDCEMTGLDPETDAIIEIYCIITDGQLKLLDESGWGTVVHQTKEKMGMMDEWCTR 76 Query: 65 TH------------------------------------------TASGLVERVKASTMGD 82 SGL V ST+ Sbjct: 77 VRMSRPMLLFVSGLDTSIFHPARGSSSSMGKNGWGTVAKQSVVDGESGLTAAVIQSTVTP 136 Query: 83 REAELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELA 141 ++A L ++++++P G++ + GNS+ D+ FL K P L D + Sbjct: 137 QQAADGLLAYIQKYIPERGQALLSGNSVHADQAFLRKGPPGLVPTSMPTSSDPQVALTVP 196 Query: 142 RRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIK 180 R K+GTH+A DDI ES+ E YYR + Sbjct: 197 R-----------KKGTHKAKDDILESIEEAKYYRSAIFQ 224 >UniRef50_A4V739 Plant-inducible oligoribonuclease n=2 Tax=Pseudomonas fluorescens RepID=A4V739_PSEFS Length = 195 Score = 172 bits (436), Expect = 5e-42, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 92/182 (50%), Gaps = 9/182 (4%) Query: 1 MSANENNLIWIDLEMTGLD------PERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQ 54 M+ ++ L W+DLE TG RI+EI +VTD + +LA + Sbjct: 6 MTRSQRRLPWLDLETTGFTELFDRRVYEHRILEIGAVVTDEHFTVLASTSIVIQQPMVRV 65 Query: 55 LALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQW-VPAGKSPICGNSIGQDR 113 L L D+ R HT +GL + V S + AE ++F +Q V P+CG+ I DR Sbjct: 66 LELSDEAVTRMHTNNGLFDEVVKSFTTLKAAEHQLIQFYRQNGVSKKVEPLCGSGIHFDR 125 Query: 114 RFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAY 173 F+ MPEL + +YR LD+S++KE + P +K+ H+A+ DI ESVAE Sbjct: 126 MFIEAQMPELHDFLYYRNLDISSVKEFLKTISPSFE--PSKRQQHRALPDILESVAEAKT 183 Query: 174 YR 175 YR Sbjct: 184 YR 185 >UniRef50_Q8QNE0 EsV-1-139 n=1 Tax=Ectocarpus siliculosus virus 1 RepID=Q8QNE0_ESV1 Length = 274 Score = 171 bits (435), Expect = 8e-42, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 53/230 (23%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 NE WID+E TGLD + + I+EI +VTD +LN + + H +A W Sbjct: 39 NEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSTWCR 98 Query: 64 -----RTHTASGLVERVKASTMGDREAELATLEFLKQWVPA------------------- 99 R +GL E S + EAE F + Sbjct: 99 KKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTSQITSSQPFFDR 158 Query: 100 ----------------------------GKSPICGNSIGQDRRFLFKYMPELEAYFHYRY 131 K + G+++ DR FL KY P L+ +FHYR Sbjct: 159 TLGANGTFIGASDTSRYHHQHHPRRSNFKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRV 218 Query: 132 LDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYYREHFIK 180 +DVST E+ RRW+P++ ++ G+H+A DDI +S++ + +++E ++ Sbjct: 219 VDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKETLLQ 268 >UniRef50_A6DMP4 Oligoribonuclease n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMP4_9BACT Length = 182 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 5/173 (2%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N L WID+EMTGLDP+ +RI+EIA L+TD L+I+ + L MD+WN RT Sbjct: 2 NKLFWIDMEMTGLDPDENRILEIAILITDHKLDIID-RFHAVIRTPKAILDGMDEWNTRT 60 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 HT++GLV+ +E E+ L + + +CG+S+ DR F+ K+MP Sbjct: 61 HTSNGLVKEAVNGRF-IQEVEIDLLNLADKHFANKQIFLCGSSLSLDRMFIEKFMPSFAK 119 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 HYR +DVS+ K + + + + F KQ H+AM+DI ES+ EL Y + Sbjct: 120 KLHYRIVDVSSWKAIFQTF---LDLRFHKQDAHRAMNDIEESLRELKLYLSYI 169 >UniRef50_B8HIN1 Putative oligoribonuclease n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HIN1_ARTCA Length = 199 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 15/189 (7%) Query: 1 MSANENNLIWIDLEMTGL--DPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALM 58 ++AN +N++W+D E TGL DP +E A ++TD LN LA I +H ++E+LA M Sbjct: 3 ITANPDNILWVDYEATGLMSDPFT-VPLEGAAIITDGQLNELAVLEGITIHATEEELAYM 61 Query: 59 DDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC-----------GN 107 D+ HT +GL+++V+AST+ + + A F + P + GN Sbjct: 62 GDFVRDMHTKTGLLDKVRASTVTRDQFDNALASFAAPYFPTKGEELADGTKYRGMVIGGN 121 Query: 108 SIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDG-FTKQGTHQAMDDIRE 166 S+ D K+ P+ YR +D+S L EL RRW + K H A+ DIR Sbjct: 122 SVKFDFDVTEKFFPQTRKNMDYRVIDISGLGELVRRWSYDYWKAMPPKLSDHTALTDIRA 181 Query: 167 SVAELAYYR 175 V EL YYR Sbjct: 182 GVNELRYYR 190 >UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GR95_BIFLI Length = 185 Score = 159 bits (404), Expect = 3e-38, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 11/182 (6%) Query: 1 MSANEN-----NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQL 55 MS ++N L+W+D E TGLDP +D I+EI + T +L + +G VH + Sbjct: 1 MSTHDNDDKPVRLLWVDTETTGLDPRKDPILEIGMIATGPDLKPVDDGFHTTVHWEGKP- 59 Query: 56 ALMDDWNVRTHTASGLVERV-KASTMGDREAELATLEFLKQWVPAGKSPI-CGNSIGQDR 113 ++ H +GL+ S A L+ +++ + + G + G+++ DR Sbjct: 60 ---SEFIQSMHGPNGLLAECAHPSAPNMFAAALSARDYVVRHLGQGVRLLPAGSTVRFDR 116 Query: 114 RFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAY 173 L +MP + +R LD+S + E R W P L G H+ M + +++ Sbjct: 117 DMLDSWMPGVLDGCSHRSLDISAVCEAVRMWNPAALPGMEPSTDHRVMHCLADTLRYAHA 176 Query: 174 YR 175 YR Sbjct: 177 YR 178 >UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SLB2_TETNG Length = 248 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 47/104 (45%), Positives = 69/104 (66%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + ++W+DLEMTGLD E+D+IIE+A L+TD++LNILAEGP + ++Q DE L M +W Sbjct: 1 SMSQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWC 60 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICG 106 H SGL + V+ S + +AE L F++Q P G+ P+ G Sbjct: 61 KEHHGKSGLTQAVRNSKITLEQAEYEFLSFVRQHTPPGQCPLAG 104 Score = 67.9 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 140 LARRWKPEILDG-FTKQGTHQAMDDIRESVAELAYYREHFIKL 181 RRW PE K+ TH+A+ DI ES+ EL +YR ++ Sbjct: 192 ACRRWFPEEYKQVPPKKATHRALSDIYESIKELQFYRSSIFRV 234 >UniRef50_Q0UIM9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UIM9_PHANO Length = 473 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 5/150 (3%) Query: 26 IEIATLVTDANLNILAE-GPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDRE 84 + +A VTDA++N+L E G +H S EQL M +W H SGL + ST + Sbjct: 1 MSLAAFVTDADMNLLDESGYEAVIHHSREQLDRMGEWCTSHHGDSGLSQDCLDSTTTAEQ 60 Query: 85 AELATLEFLKQWVPA-GKSPICGNSIGQDRRFLFKYMPE-LEAYFHYRYLDVSTLKELAR 142 A LE++K++VP + GNS+ D+ FL K + + + HYR LDVS++KE AR Sbjct: 61 AAEGLLEYIKKYVPERRTGLLAGNSVHADKSFLVKQPYKVVTDHLHYRLLDVSSIKEAAR 120 Query: 143 RWKPE--ILDGFTKQGTHQAMDDIRESVAE 170 RW P+ + KQ H+A DI ES+ E Sbjct: 121 RWAPKDVLKKIPRKQMLHEARADILESIEE 150 >UniRef50_B5LWG6 Putative oligoribonuclease n=1 Tax=Feldmannia species virus RepID=B5LWG6_9PHYC Length = 250 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 49/220 (22%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 N WID+E + LD ++EIA +VTD+ LN+ + H + + +W Sbjct: 19 RNNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCK 78 Query: 64 -----RTHTASGLVERVKASTMGDREAELATLEFLKQWV--------PAGKS-------- 102 R++ +GL + S +A L F + + PA KS Sbjct: 79 EKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYSTHEIGRGRPAHKSRTFFDRTS 138 Query: 103 ---------------------------PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVS 135 + G+++ DRR + K+ P L Y ++ +DV+ Sbjct: 139 GANGMKLSPYDISCQVQNFTGTRRSQGLLAGSTVYFDRRIIEKHFPVLRKYLSHKNVDVT 198 Query: 136 TLKELARRWKPEILDGFTKQGT-HQAMDDIRESVAELAYY 174 +L E A+R+ P++++ K H+AMDDI +S+ Y Sbjct: 199 SLLETAKRFHPDLIENKPKPTMVHRAMDDILDSLTLYKYL 238 >UniRef50_Q6XM84 FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a RepID=Q6XM84_9PHYC Length = 238 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 57/226 (25%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N WID+E + LD + ++E+A +VTD +LN+ + H + + +W + Sbjct: 10 NPWFWIDMETSSLDFSQSEVLEVALVVTDHHLNVWDSLHLVIHHPINILMLKSSNWCKQR 69 Query: 66 -----HTASGLVERVKASTMGDREAELATLEFLKQWV----------------------- 97 + +GL + S +A L+F + + Sbjct: 70 FCSLKYGGNGLFDECHYSETSIADATHKMLQFFEYYCTHDIGTGSRRPPPSERSFFDRTR 129 Query: 98 ----------------------------PAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 ++ + G+++ DRR + + P L+ Y + Sbjct: 130 GTNGVLLSPLRCTHRDIPKQCTTTPGGSKKKQALLTGSTVYFDRRIIETHFPLLQKYLSH 189 Query: 130 RYLDVSTLKELARRWKPEILDGFTKQ-GTHQAMDDIRESVAELAYY 174 + +DV+T+ E A+R++P+++ K H+AMDDI +S+A Y Sbjct: 190 KNIDVTTMLETAKRFRPDLMQYKPKPLMKHRAMDDIMDSLALYRYL 235 >UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae 22.4-21 RepID=A4NXF4_HAEIN Length = 115 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 66/99 (66%), Positives = 80/99 (80%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS ++ NLIWIDLEMTGLDPE++RIIEIAT+VTD NLNILAEGP +AVHQSDE L M+D Sbjct: 1 MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMND 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPA 99 W +TH+ +GL+ERVKAS + +R AEL TL+FLK Sbjct: 61 WCQKTHSENGLIERVKASKLTERAAELQTLDFLKNGCQK 99 >UniRef50_Q2RJC1 DNA polymerase III, epsilon subunit n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJC1_MOOTA Length = 921 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 25/174 (14%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +D+E TGLDP RDRIIEIA + + + V+ ++ Sbjct: 3 PQTYVVLDVETTGLDPARDRIIEIAAVRLEGG--NITRQFQTLVNPGRPIPPAIE----- 55 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + E L+ + +P G++ D FL + L Sbjct: 56 --RLTGISDAMVREAPPLPEVLPGLLDLFRDAIP------VGHNGTFDLAFLNQA---LG 104 Query: 125 AYFHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIRESVAEL 171 +H LD L + R G H+A+DD+ + L Sbjct: 105 HGWHSPLLDTLALSRILFPCLASHRLDYMSKYLTLEATGHHRALDDVLTTARLL 158 >UniRef50_C7TNW1 Putative uncharacterized protein (Fragment) n=1 Tax=Angiostrongylus cantonensis RepID=C7TNW1_9BILA Length = 108 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 88 ATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPE 147 L FL++ P+ GNS+ RRF+ KYMP LE YR +D ST+KELA RW P Sbjct: 10 QILAFLEREAVGETCPLAGNSVHFHRRFIMKYMPRLEKRLRYRIVDASTIKELAARWYPN 69 Query: 148 ILD-GFTKQGTHQAMDDIRESVAELAYYREHFIK 180 L +K+G H A++DIR S+ EL YYR K Sbjct: 70 ELKLAPSKKGAHSALNDIRGSIGELRYYRSSIFK 103 >UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogaceae RepID=DPO3_THEP1 Length = 1367 Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 71/187 (37%), Gaps = 22/187 (11%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S + +D E TGLDP+ D IIEI + + I+ E + S E + Sbjct: 352 SFENATFVVLDFETTGLDPQVDEIIEIGAVKI-QDGQIVDE-YHTLIKPSREISRRSSE- 408 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 +G+ + + + E L FL+ S I ++ D RFL ++ Sbjct: 409 ------ITGITQEMLENKRSIEEVLPEFLGFLE------NSIIVAHNANFDYRFLRLWIK 456 Query: 122 ELEAYFHYR-YLDVSTL-KELARRWKPEILDGFTKQG-----THQAMDDIRESVAELAYY 174 ++ R Y+D L K L + + K G H+A+DD R + + Sbjct: 457 KVMGLDWERPYIDTLALAKSLLKMRSYSLDSVVEKLGLGPFRHHRALDDARVTAQVFLRF 516 Query: 175 REHFIKL 181 E K+ Sbjct: 517 VEMMKKI 523 >UniRef50_B7GTG1 Putative uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis RepID=B7GTG1_BIFLI Length = 189 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 14/189 (7%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+ L+W+D+E TG DP D ++EI T + + Sbjct: 1 MTRKTEALLWVDIETTGTDPRHDLMLEIGLRCTSMDAKTEYARYESVIKPGVLPTDRSFA 60 Query: 61 WNVRTHTASGLVERVKASTMGD---REAELATLEFLKQWVPAGKSPICG-NSIGQDRRFL 116 + R H +GL++ V ++ LA ++F + G N +G D FL Sbjct: 61 YAHRMHEENGLIDEVIDASPELCSTARVALAVIDFTQSMAETHVLHPAGTNMMGFDLPFL 120 Query: 117 FKYMP------ELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMD----DIRE 166 Y+ YR LD++ ++ + + +T+ +H+ D DI E Sbjct: 121 EHYLFTEDQWGRFHRLLSYRALDMTAIRLTQTALGADPYEHYTQTKSHRVTDCLDMDISE 180 Query: 167 SVAELAYYR 175 + L + Sbjct: 181 YIEWLDLVK 189 >UniRef50_B6XUS8 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XUS8_9BIFI Length = 192 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 3/178 (1%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 L+W+D E TG D +E+ TD + L M Sbjct: 11 KPEALLWLDFETTGTDRNDSLPLEVGMECTDVLGEHSYGSLHRIIRPDYLDLLDMSPMAF 70 Query: 64 RTHTASGLVERVKAS---TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 HT +GL+ + A E+L+ G ++ D FL + Sbjct: 71 SMHTDNGLLFELLNGSDRNDCVEAVVNAVEEYLESLSQRFTLVPAGTNVDFDLDFLKRLD 130 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 + + YR D++TL+ R +GTH+ D IR + + YR+ Sbjct: 131 LNPDRWLSYRKFDLTTLRRYLRFIDCPEDPYEGHRGTHRVRDCIRRDINDYIRYRKLL 188 >UniRef50_A7HNS3 DNA polymerase III, alpha subunit n=2 Tax=Thermotogaceae RepID=A7HNS3_FERNB Length = 1390 Score = 122 bits (306), Expect = 7e-27, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 24/176 (13%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ + +DLE TGL+P D I+EI + T + ++ E V + N Sbjct: 379 DDYTYVVLDLETTGLNPRSDEIMEIGAVKTR-DGKVIDE-FHTFVRP--------NKLNK 428 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 ++ +G+ E + + LEF+K S + ++ D FL + + Sbjct: 429 KSLNITGITEDMLKDAPDIMQVLPKLLEFIK------DSILVAHNADFDMTFLKNILSKS 482 Query: 124 EAYFHYRYLDVSTLKELARRWKPE---ILDGFTKQG-----THQAMDDIRESVAEL 171 F+ Y+D L + R K + + G H+A+DD R +V Sbjct: 483 GIEFNPPYIDTLRLSQALLRNKIKSFSLDKLVDHFGLGAFQHHRALDDARVTVNVF 538 >UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamydiales RepID=Q252U5_CHLFF Length = 249 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 22/183 (12%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + + +D EMTGLD ++DRIIE A + N++ ++ A Sbjct: 5 KDTIFVCLDCEMTGLDVKKDRIIEFAAKRFTFD-NVIDS-METLINPDRVISAES----Q 58 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 R H + + + E FLK+ I G+S+G D + L + + Sbjct: 59 RIHR---ISDAMLKDQPRISEVFPKIQAFLKE-----GDYIVGHSVGFDLQVLTQEAERI 110 Query: 124 EAYF--HYRYLDVSTLKELA------RRWKPEILDGFTKQGTHQAMDDIRESVAELAYYR 175 F Y +D L + + G H+AM D+ ++ ++ Sbjct: 111 GETFLSKYCIIDTLRLAKEYGDSPNNSLEALAVHFNVPYDGNHRAMKDVEININIFKHFC 170 Query: 176 EHF 178 + F Sbjct: 171 KRF 173 >UniRef50_C7IIY1 DNA polymerase III, epsilon subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIY1_9CLOT Length = 726 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 66/181 (36%), Gaps = 28/181 (15%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + E++ + D+E TGL+P +D+I EI + + + + V+ + + Sbjct: 417 SLEDDFVVFDIETTGLNPHQDKITEIGAVKVRNG--QIVDRFSAFVNPGVSIPSFIV--- 471 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 +G+ + + + +EF++ S + ++ D F+ + Sbjct: 472 ----KLTGITDDMVKDAPPVEQVLNEFMEFIQ------GSVLVAHNANFDVGFIKQNAKL 521 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDG----------FTKQGTHQAMDDIRESVAELA 172 + Y+D EL R+ PE+ + H+A+DD + Sbjct: 522 MGEKVKNPYIDT---LELCRKMFPELGRYKLNIVAKHLKIELENHHRAVDDSMATAKIFM 578 Query: 173 Y 173 + Sbjct: 579 H 579 >UniRef50_C7G8J4 Putative DNA polymerase III, alpha chain n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8J4_9FIRM Length = 235 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 28/183 (15%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + + IDLEMTGL+ + D I+E+ + + + + + Q+ + + + Sbjct: 2 QDYVVIDLEMTGLNAKTDHILEVGAVRVRNHQAV--DKFGAILCQNVKIPEKVTE----- 54 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ E + M EA EF+ G+ I G ++ D FL ++ Sbjct: 55 --LTGITEAMVQGGMEKEEAMRQFFEFI------GEDIIVGQNVIFDYGFLKQWAVNHNM 106 Query: 126 YFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVAELAYYR 175 +D +LAR++ P+ G ++ H+A DD E+ R Sbjct: 107 PLERSAVDT---LKLARKFLPKEQKKDLESLCAYFGVKRENAHRAFDDAYETWQIYEALR 163 Query: 176 EHF 178 E + Sbjct: 164 ERY 166 >UniRef50_C0FUI4 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUI4_9FIRM Length = 241 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 28/170 (16%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + IDLEMTGL+ + DRI+E N++ + ++ + + + Sbjct: 5 YVVIDLEMTGLNAKTDRILEAGAARVRG--NVVTATFSEIINPKRKLPEKVV-------S 55 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ + A A +F+ G+ + G ++ D FL ++ + F Sbjct: 56 LTGITNEMAAQGKETDATLAAFFDFI------GEDILVGQNVIFDYSFLKQWAVNHKRTF 109 Query: 128 HYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRES 167 +D +LAR++ P+ G + H+A+DD+ E+ Sbjct: 110 ERNAVDT---LKLARKFLPQEQKKDLASLCSYFGIERVHAHRALDDVMET 156 >UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xanthomonas albilineans RepID=D2UDX2_XANAL Length = 492 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 42/211 (19%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 + ++ ++ DLE G DP R RI + A + TDA LN + E + V +D+ L Sbjct: 12 ATMPDSFLFYDLETFGADPRRTRIAQFAAVRTDAALNQIEEPISFFVQPADDLLPSPVA- 70 Query: 62 NVRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 +G+ ++ + + +A E Q + NS+ D F+ + Sbjct: 71 ----TLITGITPQQALREGINEADAFARIAE---QMAQPQTCTLGYNSLRFDDEFIRHGL 123 Query: 121 PELEAYFHYRY----------LDVSTLKELARRWKPEILDGFTKQ--------------- 155 FH Y D+ + L +P+ + ++ Sbjct: 124 FR---NFHDPYEREWRGGNSRWDLLDMLRLMHALRPDGIVWPQREDGATSFKLEQLALAN 180 Query: 156 -----GTHQAMDDIRESVAELAYYREHFIKL 181 H+A+ D+ ++ ++R +L Sbjct: 181 GVRDGDAHEALSDVYATIGMARHFRRCQPRL 211 >UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas RepID=B4SPA5_STRM5 Length = 479 Score = 119 bits (299), Expect = 4e-26, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 77/207 (37%), Gaps = 42/207 (20%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++ ++ DLE G DP R RI + A + TDA+LN + + V +D+ L Sbjct: 3 DSFLFYDLETFGQDPRRTRISQYAAIRTDADLNEIDTPVSFFVRPADDLLP--SPMATLV 60 Query: 66 HTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ ++ A + + EA E Q G + N++ D F+ L Sbjct: 61 ---TGITPQQALAEGISEAEAFDRINE---QLSRPGTCALGYNTLRFDDEFVR---YGLF 111 Query: 125 AYFHYRY----------LDVSTLKELARRWKPE--------------------ILDGFTK 154 FH Y D+ + L R +PE + + Sbjct: 112 RNFHDPYEREWRNGNSRWDLLDMLRLMRAMRPEGIQWPLREDGATSFKLEHLAEANNVRE 171 Query: 155 QGTHQAMDDIRESVAELAYYREHFIKL 181 H+A+ D+R ++ +++ +L Sbjct: 172 GDAHEALSDVRATIGMARLFKQSQPRL 198 >UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales RepID=A6VXX3_MARMS Length = 484 Score = 119 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 71/214 (33%), Gaps = 48/214 (22%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S+ + W D E TG DP RDR ++ A + TD + N + E +++ L Sbjct: 3 SSGPTSFFWFDFETTGTDPARDRPMQFAGIRTDLDFNPIGEPIMFYCRLAEDVLPQP--- 59 Query: 62 NVRTHTASGLVERVKASTMGDREA------ELATLEFLK-QWVPAGKSPICGNSIGQD-- 112 E + + ++A E ++ ++ + G + N+I D Sbjct: 60 -----------EACLLTGISPQDANREGLCEAEFMQAVEAELSQPGTCALGYNTIRFDDE 108 Query: 113 -------RRFLFKYMPELEAYFH-YRYLDVSTLKELARR----WKPEI------------ 148 R F+ Y E + + +D+ + R W Sbjct: 109 VVRYGFYRNFIDPYTREWQNNCSRWDMIDLVRMTYAMRPEGIVWPKNEDGQVSMKLEALT 168 Query: 149 -LDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 +G + H A+ D+ ++ R KL Sbjct: 169 KANGIAHEQAHDALSDVYGTIEIAKLIRSKQPKL 202 >UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlamydiales RepID=C4PPS2_CHLTJ Length = 250 Score = 118 bits (297), Expect = 7e-26, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 63/184 (34%), Gaps = 23/184 (12%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + + +D E TGLD ++DR+IE A + + + + +H A Sbjct: 5 KDVEFVCLDCETTGLDVKKDRVIEFAAIRFTFD--EIIDSVEFLIHPERAVSAES----Q 58 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + H + + + E F K+ + I G+ +G D + L + L Sbjct: 59 KIHK---ISDAMLRDKPKFGEVFSRIKGFFKE-----RDHIVGHHVGFDLQVLSQESERL 110 Query: 124 EAYF---HYRYLDVSTLKELA------RRWKPEILDGFTKQGTHQAMDDIRESVAELAYY 174 H+ +D L + QG H+AM D+ +V + Sbjct: 111 GETLLPKHHYVIDTLRLAKEYGDSPNNSLEALARHFNVPHQGNHRAMKDVEMNVKVFKHL 170 Query: 175 REHF 178 + F Sbjct: 171 TKRF 174 >UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSN1_AZOVD Length = 476 Score = 118 bits (297), Expect = 7e-26, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 76/210 (36%), Gaps = 42/210 (20%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M+++ + W D E TG++P DR +++A + TD LN + + +D+ L Sbjct: 1 MTSS---IFWYDYETTGINPRCDRPLQVAGIRTDEALNEIGAPLNLYCRPADDILPHPAA 57 Query: 61 WNVRTHTASGLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQD------- 112 V +G+ R+ A + + E + G NS+ D Sbjct: 58 CLV-----TGITPRLLAERGLCEAEFVTRL---HAELALPGTCTAGYNSLRFDDEISRHA 109 Query: 113 --RRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-------------- 156 R F Y E +A D+ L A +PE + ++G Sbjct: 110 LYRNFFDPYAREWQAGNSR--WDLIDLLRTAYALRPEGIHWPQEEGRVSLRLERLTAANG 167 Query: 157 -----THQAMDDIRESVAELAYYREHFIKL 181 H A+ D+R ++A RE KL Sbjct: 168 IEHGQAHDALADVRATIALARLLRERQPKL 197 >UniRef50_UPI000185C525 DNA polymerase III, epsilon subunit n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C525 Length = 529 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 60/186 (32%), Gaps = 29/186 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +DLE TGL + D IIEI + T I + + E + Sbjct: 20 NTTFVVVDLETTGLKAKNDHIIEIGAIKTRGGKTI--GTFSSFIDPGMEIPDHIT----- 72 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + +G+ + LEF + G + N+ D FL + +L Sbjct: 73 --SLTGITTADVETAPQLGTVITQFLEFAR-----GSVWVAHNA-KFDIGFLRQACTDLG 124 Query: 125 AYFHYRYLDVSTLKELARRW------------KPEILDGFTKQGTHQAMDDIRESVAELA 172 + V LARR + G + H+A+DD +V L Sbjct: 125 --LDWPSPSVVDTLTLARRVLDRSQVGSFKLSQLARYVGSPNRPAHRALDDAIATVDVLH 182 Query: 173 YYREHF 178 Y E Sbjct: 183 YLMERL 188 >UniRef50_B1I276 DNA polymerase III, epsilon subunit n=3 Tax=Bacteria RepID=B1I276_DESAP Length = 921 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 20/180 (11%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + +DLE TGLDP+ D I+E+ + + V S A + Sbjct: 3 RTFVVLDLETTGLDPQADEIVEVGLVRVEDGK--PGAVFHALVRPSRPLPARIK------ 54 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 + +GL + A E A FL G P+ G+ + D FL ++ A Sbjct: 55 -SLTGLDDADLAERPDWSEVRPAVTAFL------GNEPVVGHHVHFDLAFLERHA-GYRA 106 Query: 126 YFHYRYLDVSTL----KELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 Y +D++ L R ++ H+AM+D R + E F +L Sbjct: 107 TQAYDTVDLARLVLPGLPSYRLELLCAHLDLPERPGHRAMEDARAAAGLFTALLERFCRL 166 >UniRef50_A9KR66 DNA polymerase III, epsilon subunit n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KR66_CLOPH Length = 235 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 27/180 (15%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLV-TDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N + ID+E TGL PE+DRIIEIA + D E ++ + + Sbjct: 2 NFLAIDIESTGLSPEKDRIIEIAAIRYIDGKPK---ERFEKLINPGCPLPERITE----- 53 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ E + A M +RE L F AG+ + G+++ D F+ L+ Sbjct: 54 --LTGITEDMLAGAMTEREVIKEFLTF------AGEDVLLGHNVSVDFSFIKTAADRLKI 105 Query: 126 YFHYRYLDVSTLKELARRWKPE-------ILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 + + +D L + + G ++ +H+A++D +A Y++ + Sbjct: 106 GYERQGIDTLYLSRTLKSDLEKKNLESMCEHYGIIRECSHRALEDA---IAAATLYQKLY 162 >UniRef50_B3DTZ9 Oligoribonuclease n=2 Tax=Bifidobacterium RepID=B3DTZ9_BIFLD Length = 214 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 70/187 (37%), Gaps = 13/187 (6%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW- 61 A + L+WID E TGLDP + ++E+ VTD + VH + + Sbjct: 21 AKPHMLLWIDTETTGLDPNQCELLEVGMQVTDLKAETRGGSLHLIVHPDNVRNWANHPEM 80 Query: 62 --NVRTHTASGLVERVKASTMGDREAELATL---EFLKQWVPAGKSPICGNSIGQDRRFL 116 H A+GL+ + + + L EFL + G ++ D R L Sbjct: 81 LKAYEMHLANGLMLACAEAPKTGYDYKHTALNIHEFLNDQLSQYTLHPAGTNVDFDLRQL 140 Query: 117 FKYMPELEAY-----FHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAEL 171 ++ + H+R LD+++ + + GTH+ D IR + + Sbjct: 141 DVHLSRHLEHPITQGLHHRKLDLTSFRLADQAIGGNPYQN--HAGTHRVQDCIRRDINDY 198 Query: 172 AYYREHF 178 Y + Sbjct: 199 TAYLDII 205 >UniRef50_C1YUT4 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YUT4_NOCDA Length = 595 Score = 116 bits (291), Expect = 4e-25, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 22/175 (12%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TG RI E+ + ++ E V+ A + Sbjct: 26 FVVLDLETTGTSASGSRITEVGAVRVRGG-EVVGE-FATLVNPGTPIPANIT-------L 76 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE-AY 126 +G+ + + AS E L FL + N+ D FL + Sbjct: 77 LTGITQSMVASAPPMEEVLPRLLAFLD--AEPDTVLVAHNA-PFDTGFLKAACERHGTDW 133 Query: 127 FHYRYLDVSTLKEL---------ARRWKPEILDGFTKQGTHQAMDDIRESVAELA 172 Y +D L R G H+A++D R +V L Sbjct: 134 PGYPVVDTLRLARAVLARGETRNHRLATLAAYFGVPVAPNHRALEDARATVGVLH 188 >UniRef50_C4ZI99 DNA polymerase III, epsilon subunit n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZI99_EUBR3 Length = 245 Score = 116 bits (290), Expect = 5e-25, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 30/179 (16%) Query: 1 MSANEN--NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALM 58 MS +N N IDLEMTGL + D+IIEI + + + V+ Sbjct: 1 MSNIDNIKNYTVIDLEMTGLSAKNDKIIEIGAARVRGG--EIVDTISTLVNPKQHIP--- 55 Query: 59 DDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK 118 R +G+ + + EA L F+ G I G ++ D FL + Sbjct: 56 ----QRVQELTGITDSDVENAADMDEAVDNLLNFI------GDDIILGQNVTFDYSFLKQ 105 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPE----------ILDGFTKQGTHQAMDDIRES 167 + + D ++AR+ P G +++ H+A+DD E+ Sbjct: 106 WAVNHKRTLSLNAYDT---LKIARKCLPAEQSKKLEDLCEYFGVSRKNAHRALDDAIET 161 >UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae RepID=Q2P315_XANOM Length = 481 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 36/205 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 ++ ++ DLE G DP R RI + A + TDA L ++ E + V +D+ L + Sbjct: 2 PDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLP--SPYATM 59 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + + + EA E Q + NSI D F+ + Sbjct: 60 VTAIT--PQHALREGVTEAEAFARIAE---QMSRPQTCTLGYNSIRFDDEFVRCGLFR-N 113 Query: 125 AYFHYR--------YLDVSTLKELARRWKPEILDGFTKQ--------------------G 156 Y Y D+ + + +P+ + ++ Sbjct: 114 FYDPYEREWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLASANDVREGD 173 Query: 157 THQAMDDIRESVAELAYYREHFIKL 181 H+A+ D+ ++ +++H KL Sbjct: 174 AHEALSDVYATIGMARKFQQHQPKL 198 >UniRef50_B0MME8 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MME8_9FIRM Length = 1605 Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E+++I D+E TGL P +RI EI + + E + V+ M Sbjct: 588 EDDIIVFDIETTGLHPANERITEIGAVKLRN--MEIVERFSTFVNP-------MMPIPSN 638 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + A + A + F G SP+C ++ D F+ +E Sbjct: 639 ITELTGITDDMVADAPTEDVAVSDFMAF------CGNSPVCAHNAKFDVSFIRSAAARME 692 Query: 125 AYFHYRYLDVSTLKELA----RRWKPEILDGFTKQG---THQAMDDIR 165 F +D ++ + A + +K + + + K G H+A+ D Sbjct: 693 KSFDNPVVDTLSIAKAALKGIKNYKLDTIAKYFKLGDFDHHRAVADAE 740 >UniRef50_A6P0N2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0N2_9BACE Length = 1390 Score = 115 bits (288), Expect = 8e-25, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 28/168 (16%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 ++ D+E TGLD RD IIEI ++ +AE V + + Sbjct: 368 EVVCFDIETTGLDNRRDVIIEIGAVILRNG--EIAETFDTFVSPGRPLSREIVE------ 419 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 + + +++ EA A LEF AG P+ ++ D F+ + Sbjct: 420 -LTSITDKMLEGAPSQEEAIRAFLEF------AGDRPLAAHNAEFDMGFIAEGCRRYGIP 472 Query: 127 FHYRYLDVSTLKELARRWKPEILDG----------FTKQGTHQAMDDI 164 F +D LA+ P++ H+A D Sbjct: 473 FEKTSIDT---LILAQNLLPDLGKYKLDIVAEHLRLPPFKHHRADADA 517 >UniRef50_C8WX41 Exonuclease RNase T and DNA polymerase III n=3 Tax=Bacteria RepID=C8WX41_ALIAD Length = 952 Score = 114 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 64/185 (34%), Gaps = 27/185 (14%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 I +DLE TGLDPER I+EI L + + V + Sbjct: 2 EWIIVDLETTGLDPERAEILEIGALRVRGG--EIVDTFHTLVRPERPIPDEIT------- 52 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 +GL + A +REA + F AG +P+ G+ +R FL + Sbjct: 53 RLTGLSDADVAGAPSEREALMRFAGF------AGHTPMAGHHWVFERSFLLHRVARYGLP 106 Query: 127 FHYRYLDVSTLKELARRWKPEILDG----------FTKQGTHQAMDDIRESVAELAYYRE 176 D LAR P ++ + +H+A+ D R + L E Sbjct: 107 LQPG--DGLCTLSLARILAPRLMSHRLEYLARRLRLRAEVSHRALADARTAHQLLMRLEE 164 Query: 177 HFIKL 181 +L Sbjct: 165 KARRL 169 >UniRef50_Q8XJR3 DNA polymerase III polC-type n=37 Tax=Clostridia RepID=DPO3_CLOPE Length = 1449 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 64/179 (35%), Gaps = 28/179 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 ++ + D+E TG + D+IIEI + + + + V + + Sbjct: 432 DDEYVVFDIETTGFSSKNDKIIEIGAVKLKDG--EIVDSFSTFVDPKVNIPYKITE---- 485 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + + + E +EF+ G S + ++ D F+ K + ++ Sbjct: 486 ---LTSITQNMVNGQPTIDEVLPKFMEFV------GNSVLVAHNAAFDVGFIKKNLMDMG 536 Query: 125 AYFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVAELAY 173 +D LAR P++ G + + H+A+DD + + L + Sbjct: 537 KTLKNPVMDTV---PLARYLYPDLKKVKLNLVAKHLGISLENHHRAVDDAKATAEILKF 592 >UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria RepID=B3PLL7_CELJU Length = 497 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 71/216 (32%), Gaps = 49/216 (22%) Query: 1 MSANEN-NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 M++ E L W D E G P DR ++ A + TD +LNIL E TI + + L Sbjct: 1 MTSTEQITLYWHDYETWGESPAIDRPVQFAGVRTDLDLNILGEPLTIYARPAPDVLPKP- 59 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELA-------TLEFLKQWVPAGKSPICGNSIGQD 112 E + + +EAE ++ G + NSI D Sbjct: 60 -------------EACLITGITPQEAEAKGVSEADFIAAIHRELARPGTCGVGYNSIRFD 106 Query: 113 ---------RRFLFKYMPELEA-YFHYRYLDVSTLKELARR---WKPEILDG-------- 151 R F Y E + +DV + R P+ DG Sbjct: 107 DEVTRYTLYRNFYDPYEREWRNGNSRWDLIDVLRMTRALRPEGIHWPDYEDGTPCFKLER 166 Query: 152 ------FTKQGTHQAMDDIRESVAELAYYREHFIKL 181 + + H A+ D+ ++A + KL Sbjct: 167 LTEVNRISHEAAHDALSDVHATIAMARLLKSRQPKL 202 >UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepID=Q4K7B4_PSEF5 Length = 497 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 70/201 (34%), Gaps = 35/201 (17%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 L W D E TG++P DR +++A + TD LN + E + SD+ L Sbjct: 26 LFWYDYETTGINPRCDRPLQVAGIRTDLALNEIDEPVNLYCQPSDDILPHPMACM----- 80 Query: 68 ASGLVE-RVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD---------RRFLF 117 +G+ R+ +G+ + +Q G + N++ D R F Sbjct: 81 ITGITPGRLAEQGLGEADFMTRV---HEQLARPGTCGVGYNTLRFDDEMTRYSLYRNFFD 137 Query: 118 KYMPEL-EAYFHYRYLDVSTLKELARR----W------------KPEILDGFTKQGTHQA 160 Y E + +DV R W + +G H A Sbjct: 138 PYAREWQGGNSRWDLIDVVRTAYALRPQGIVWPEEQGQVSLKLERLTAANGIDHGQAHDA 197 Query: 161 MDDIRESVAELAYYREHFIKL 181 + D+R ++A R+ +L Sbjct: 198 LSDVRATIALARLVRDKQPRL 218 >UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Deinococcus RepID=Q1IXC1_DEIGD Length = 180 Score = 113 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 63/184 (34%), Gaps = 21/184 (11%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 N++ DLE TGL PERD I+EI L + +E V + + R Sbjct: 2 NVVVFDLETTGLSPERDAIVEIGALRVVDGRVVESERFETLVRPQNAAGE-VVPIPWRAQ 60 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 G+ + + + L+F+ G+S + ++IG D F+ Sbjct: 61 RVHGISDAMVQDAPELGQVLPEFLDFV------GRSAVAAHNIGFDSSFMRAAARRCGLV 114 Query: 127 FHYRYLDVSTLKELARRWKPEILDG------------FTKQGTHQAMDDIRESVAELAYY 174 + +L+RR P F G H+++ D++ + Sbjct: 115 WAPPA--EYCTVQLSRRAFPRERTHNLDVLAQRLGLSFAPGGRHRSLGDVQVTAEAFVRL 172 Query: 175 REHF 178 E Sbjct: 173 MERL 176 >UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteobacteria RepID=Q1QT40_CHRSD Length = 495 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 64/204 (31%), Gaps = 48/204 (23%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 +W D E G DP RDR + A + TD++ N + E T +D+ L Sbjct: 10 FLWHDYETFGADPRRDRPAQFAAIRTDSDFNPVGEPMTFYCKPADDFLPHP--------- 60 Query: 68 ASGLVERVKASTMGDREAELATLEFLK-------QWVPAGKSPICGNSIGQD-------- 112 + + + + A L ++ + G + N++ D Sbjct: 61 -----QACLITGITPQAARRRGLAEIEFAARIHAEMSVPGTCSLGYNTLRFDDEVSRHLF 115 Query: 113 -RRFLFKYMPELEA-YFHYRYLDVSTLKELARRWKPE-----------------ILDGFT 153 R F+ Y E + + +DV R E +G Sbjct: 116 YRNFIDPYSREWQNGNSRWDLIDVVRTYHALRPDGIEWPTREDGAPSFRLEDLTAANGIE 175 Query: 154 KQGTHQAMDDIRESVAELAYYREH 177 G H A+ D+R ++ + Sbjct: 176 HAGAHDALADVRATIELARLLKAR 199 >UniRef50_A5UUI5 DNA polymerase III, epsilon subunit n=6 Tax=Chloroflexi (class) RepID=A5UUI5_ROSS1 Length = 956 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 55/181 (30%), Gaps = 26/181 (14%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 I ID+E TGL+ D IIEIA + +A+ + E + V Sbjct: 2 NQIYIAIDVETTGLEAGVDEIIEIAAVKFNAD--EVLETFSTLVQPVHSLPLNSS----- 54 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + AS E FLK + P+ G+++ D R L Sbjct: 55 --RLTGITADMLASAPRFAEVAPRFAAFLKNY------PLVGHNVEFDLRMLRAQ----G 102 Query: 125 AYFHYRYLDVSTLKELARRWKPEIL-------DGFTKQGTHQAMDDIRESVAELAYYREH 177 D L L P G H+A+ D + Y Sbjct: 103 MRLPQPAFDTFELATLLMPRTPAYRLSALAATLGIHHDEAHRALSDADVTRQIFLYLLRR 162 Query: 178 F 178 Sbjct: 163 I 163 >UniRef50_Q5KRE9 Probable oligoribonuclease n=2 Tax=Corynebacterium glutamicum RepID=Q5KRE9_CORGL Length = 219 Score = 112 bits (282), Expect = 4e-24, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 17/181 (9%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 I +DLE TGLD I+E+ ++ D +L +A + +++ + H Sbjct: 7 FIGLDLETTGLDAHSGVILEVGIIIFDDDLMPIAARSWLTNELVEKESIVSAPVVEVMHE 66 Query: 68 ASGLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 SGL E +K T R+ E ++ + A K P+ G+S+ DR +L +MP+L Sbjct: 67 ESGLWEDLKTGHTQPLRQVEAEASAWILE-AGANKLPMLGSSVTFDRTWLDHHMPQLHRM 125 Query: 127 FHYRYLDVSTLKELARRWK-------------PEILDGFTK--QGTHQAMDDIRESVAEL 171 FHYR +D +++ + ++L+ + H+A+ D+ +S A + Sbjct: 126 FHYRSVDATSVLLASTSLYDFININDQQTLLVLDMLEHLKRWDLKPHRALYDLCQSAALV 185 Query: 172 A 172 Sbjct: 186 K 186 >UniRef50_Q3K0L7 Exonuclease, DNA polymerase III, epsilon subunit family n=8 Tax=Firmicutes RepID=Q3K0L7_STRA1 Length = 604 Score = 112 bits (281), Expect = 5e-24, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 17/167 (10%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 +N I D+E TGL+ ++DRI+E+ ++ N ++ V+ A + Sbjct: 50 KNRFIAFDIETTGLNSQQDRIVEVGAVLF-ENGKVVDS-YESLVNAKVNISADVT----- 102 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + R+ + + + + FL + GK+P+C ++ D FL + L Sbjct: 103 --RINNITNRMIKNAPSENQVYYELVNFLGDAL-NGKTPVCAHNAKFDMGFLCNTLSRLG 159 Query: 125 AYFHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDI 164 +YLD +L ++ + +H+A D Sbjct: 160 YNGEIKYLDTLSLSRKNVKGLRNYKQNTVAEYFNLQNKNSHRAKSDA 206 >UniRef50_C8WA42 DNA polymerase III, epsilon subunit n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8WA42_ATOPD Length = 342 Score = 112 bits (280), Expect = 6e-24, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 32/185 (17%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMD 59 +S + + +DLE TGLD IIEIA L V D + E + +H E + Sbjct: 71 VSKYPESYVVVDLETTGLDVHYCEIIEIAALKVVDGK---ITEEFSSLIHPPREIPSGAT 127 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 + + + + + F+K G I NS+ D L + Sbjct: 128 -------AINHITNHMVKNAPTLDKVIPQFDTFVK-----GFPLIGHNSLRYDAIVLEEN 175 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEI--------LDGFTKQGTHQAMDD------IR 165 + Y + D T K + +P L+ H+A+ D I Sbjct: 176 FFRRDFLCDYVWYD--TYKLARQILEPPYKLINIAKRLNVKQHGKAHRALADCYMTYGIY 233 Query: 166 ESVAE 170 E + E Sbjct: 234 EKMRE 238 >UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BAS5_PARDP Length = 659 Score = 111 bits (279), Expect = 8e-24, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 54/174 (31%), Gaps = 27/174 (15%) Query: 9 IWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 + D E TGLDP DRI++IA L A + E V Sbjct: 454 VVFDTETTGLDPVADRIVQIAGLRI-ARGRLTGERFDTLVDPGRPIPPASTAV------- 505 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFH 128 G+ + + A A A + N+ D FL + +PE A+F Sbjct: 506 HGITDAMVAGAPDMTAALTAF-----HHFAEDTVLVAHNA-PFDMGFLRRAVPETGAHFD 559 Query: 129 YRYLDVSTLKELARRWKPEILDG-----------FTKQGTHQAMDDIRESVAEL 171 + LD T+ A W + H AM D R + Sbjct: 560 NQVLD--TVLLSAMLWGQSAPHSLDALTERLGIVIPPEARHTAMGDARATAEAY 611 >UniRef50_Q895K2 DNA polymerase III polC-type n=13 Tax=Clostridia RepID=DPO3_CLOTE Length = 1427 Score = 111 bits (279), Expect = 8e-24, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 63/175 (36%), Gaps = 28/175 (16%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 E++ + D+E TG + D+IIEI + + + + V+ + + Sbjct: 408 TLEDSYVVFDIETTGFSNKNDKIIEIGAVKIKEGK--VVDKYSTFVNPERIIPEKIIE-- 463 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 +G+ + + E ++F++ S + ++ D F+ K + Sbjct: 464 -----LTGIHDYMVKDAPKIEEVLPKFIDFIE------DSILVAHNANFDVSFIKKNCKD 512 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRES 167 +F+ LD L + PE+ G H+A++D + + Sbjct: 513 FGIHFNNPILDT---IPLCKFLYPELKRYKLNVVAKHLGIPLLNHHRAVEDAKTT 564 >UniRef50_D2RJV7 DNA polymerase III, epsilon subunit n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJV7_ACIFE Length = 223 Score = 111 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 20/176 (11%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL-MD 59 + A + + +DLE TGLDPERD+IIEI L A + + + Sbjct: 18 LVAFPDTYVVVDLETTGLDPERDQIIEIGALEVTAGKR--GRTFSTLLQPRTPLEGQYVS 75 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 + R +G+ + A+ R+A A +FL G G ++G D FL + Sbjct: 76 PFITR---LTGITNEMLAAAPQPRQALEAFGKFL------GSRVAVGYNVGFDMGFLQQQ 126 Query: 120 MPELE-AYFHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIRES 167 + ++DV + + R + H+A+ D+ + Sbjct: 127 FQDQLYRPLANDWVDVLPMAQTLFPLWDHHRLNNLAAWYHVENKEAHRALSDVETT 182 >UniRef50_C5B5Z3 Protein with DNA-directed DNA polymerase-like domain n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5Z3_METEA Length = 754 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 60/189 (31%), Gaps = 32/189 (16%) Query: 2 SANENNLIWIDLEMTGLDPER-DRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMD 59 + + ID E TGL P DR+IE+ + + D + + A + Sbjct: 538 AGPGERFVVIDFETTGLSPNNGDRVIEVGAVEIVDGR---IGRRFQSLANPGFPVSARIT 594 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 +G+ + E F++ G + + N+ G DRRFL Sbjct: 595 -------AITGISNAMLVDAPPLAEVIREVSAFIE-----GATLVAHNA-GFDRRFLQAE 641 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKP-----EILDGFTKQG------THQAMDDIRESV 168 M L + L L +R P ++ G H+A+ D + Sbjct: 642 MERLGLWDDREML---CTMRLGKRAYPGLGSYKLAFLAEHAGVALPDAMHRALADAMATA 698 Query: 169 AELAYYREH 177 RE Sbjct: 699 ELFLVMRER 707 >UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate division TM7 RepID=A5KSP8_9BACT Length = 476 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 73/212 (34%), Gaps = 42/212 (19%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M + DLE +GLDP RDRI++ A T +L+ + E I V +D+ L D Sbjct: 2 MKDMAETFFFYDLETSGLDPRRDRIMQFAGQRTTMDLDPIGEPFNILVRLNDDVLPSPDA 61 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLE-FLKQWVPAGKSPICGNSIGQDRRFLFKY 119 V +G+ T + AE ++ F Q G + N+I D F+ Sbjct: 62 VMV-----TGITP---QKTHEEGIAEAEFIKLFHNQVCTPGTVTVGFNNIRFDDEFIRFA 113 Query: 120 MPELEAYFHYRY----------LDVSTLKELARRWKPEI--------------------L 149 L FH Y D+ + + R +P Sbjct: 114 ---LWRNFHDPYEWAWKDGRSRWDLLDVVRMTRALRPGGIVWPVDKSDKPTNRLELLTSE 170 Query: 150 DGFTKQGTHQAMDDIRESVAELAYYREHFIKL 181 + H A+ D+ +A R+ KL Sbjct: 171 NNLEHSQAHDALSDVYALIAITRMVRDKQPKL 202 >UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus capsulatus RepID=Q605A2_METCA Length = 478 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 68/208 (32%), Gaps = 48/208 (23%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 W DLE G DP RDRI + A L TD N + + SD+ M + Sbjct: 7 FYWYDLETFGTDPARDRIAQFAGLRTDLEFNPIGPPDVLYCRPSDD----MVPYP----- 57 Query: 68 ASGLVERVKASTMGDREA------ELATLEFLKQ-WVPAGKSPICGNSIGQDRRFLFKYM 120 + + + + A E A + + + ++ G + N++ D L Sbjct: 58 -----DACLVTGITPQYAAELGVPESAFIATIHRIFMRPGTCVLGYNTLRFDDEMLRHAF 112 Query: 121 PE--LEAYFH-----YRYLDVSTLKELARRWKPE--------------------ILDGFT 153 + Y DV L L + +P+ +G Sbjct: 113 YRNLYDPYAREWKGGNSRWDVIDLARLTQALRPDGIEWPRDSLGSPVFKLERLAAANGIR 172 Query: 154 KQGTHQAMDDIRESVAELAYYREHFIKL 181 + H A+ D+R +VA E +L Sbjct: 173 HESAHDALSDVRATVAFARLIAERQPRL 200 >UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitrosomonas RepID=Q0AEW3_NITEC Length = 486 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 40/211 (18%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M + + L W D E +G +P +DR ++ A L TD LN + + I + ++L + Sbjct: 1 MRMDTSTLYWHDYETSGANPRQDRPVQFAGLRTDEALNEIGDPLVIYCKPARDRLPH-PE 59 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLK-QWVPAGKSPICGNSIGQD------- 112 + +G+ ++ A E + + Q G + N++ D Sbjct: 60 ACL----LTGITPQMAA---TRGLPEPEFIALIHAQLAQPGTCGVGYNTLRFDDEVTRFA 112 Query: 113 --RRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFT----------------- 153 R F Y E ++ DV L + +PE ++ Sbjct: 113 LYRNFYDPYAREWQSG--NSRWDVIDLARMTFALRPEGINWPVNGEGKPSFRLEDITAAN 170 Query: 154 ---KQGTHQAMDDIRESVAELAYYREHFIKL 181 H A+ D+R ++A R+ +L Sbjct: 171 GLMHDSAHDALSDVRATIALARLLRDRQPRL 201 >UniRef50_O67074 DNA polymerase III subunit epsilon n=3 Tax=Aquificaceae RepID=DPO3E_AQUAE Length = 202 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 28/187 (14%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + IDLE TG D E+ +I++A + + I+ E + V+ + Sbjct: 16 DGTFVVIDLEATGFDVEKSEVIDLAAVRVEGG--IITEKFSTLVYPGYFIPERIK----- 68 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + E LEF+ G + + G+ + QD +F+ KY + Sbjct: 69 --KLTGITNAMLVGQPTIEEVLPEFLEFV------GDNIVVGHFVEQDIKFINKYTKQYR 120 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDGFTKQ----------GTHQAMDDIRESVAEL-AY 173 +R + TLK LAR+ P + K+ G H+A+ D + Sbjct: 121 GK-KFRNPSLCTLK-LARKVFPGLKKYSLKEIAENFGFETNGVHRALKDATLTAEIFIKI 178 Query: 174 YREHFIK 180 E + K Sbjct: 179 LEELWFK 185 >UniRef50_C2BET5 3'-5' exonuclease and CRISPR-associated Cas2 family protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BET5_9FIRM Length = 295 Score = 109 bits (272), Expect = 6e-23, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 25/170 (14%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + I IDLE TGLDP DRIIEI + + + Q + + + Sbjct: 125 HTKAYIIIDLETTGLDPINDRIIEIGAIKIGKENKE----YSSIIWQDIKLSEKISN--- 177 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF-----K 118 +G+ + ++ A ++F+ G+ + G +I D +F+ + Sbjct: 178 ----ITGISDEDIKKGKDEKNAINEFIDFI------GEDTLVGYNINFDIKFINESLKRQ 227 Query: 119 YMPELEAYFHYRYLDVSTLKELARRWKPE---ILDGFTKQGTHQAMDDIR 165 P+++ + V K + +K E G K H+A++D++ Sbjct: 228 EKPKIKNMTYDVMQYVKNDKLFLKNYKLETVIKEYGINKNVPHRALEDVK 277 >UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIP6_9BACT Length = 261 Score = 109 bits (272), Expect = 6e-23, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 27/179 (15%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVT--DANLNILAEGPTIAVHQSDEQLALMDD 60 + +++ DLE TGL+P DRIIEI + D +I V+ + + Sbjct: 4 NLQRPIVFFDLETTGLNPTEDRIIEICCIKVHPDGKRDIKTRR----VNPEKPISSEASE 59 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI-GQDRRFLFKY 119 +G+ + ++ +F + I G +I D R L + Sbjct: 60 -------ITGITDEDVKDEPTFKQMAKGIYKFFE------GCDISGYNIMRFDLRVLTEE 106 Query: 120 MPELEAYFH---YRYLDVSTL--KELARRWKPEILDGFTK--QGTHQAMDDIRESVAEL 171 F + +DV + K+ R + + K +G H A +D+ ++ L Sbjct: 107 FKRAGISFDASAHDLVDVQRIFHKKEPRTLEAALRFYCKKDLEGAHAAENDVIATIDVL 165 >UniRef50_B4AHF2 DNA polymerase III PolC-type (PolIII) n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHF2_BACPU Length = 240 Score = 109 bits (272), Expect = 6e-23, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 28/181 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILA----EGPTIAVHQSDEQLALMDD 60 + +DLE TGLD ++D+IIEI + + V L D Sbjct: 3 PQTYVVLDLETTGLDHKKDQIIEIGAIKIRLGGRVREFEEVSRFHTMV-----ALEEGRD 57 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 +G+ E + +A F+ G + + + D F+ + Sbjct: 58 LPEFITNLTGITEEDLEDAPEEWDALDELQNFI------GDAIVVAQNAPFDLSFISRGD 111 Query: 121 PELEAYFHYRYLD-------VSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAY 173 E E ++ R + ++LK++ +R + G H+A++D+ ++ Sbjct: 112 IEPERFYCTRAMARFVEPELSASLKDVTKRIGISL------DGHHRALNDVEATIEVFRR 165 Query: 174 Y 174 Y Sbjct: 166 Y 166 >UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha H16 RepID=Q0JYK3_RALEH Length = 220 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 28/174 (16%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ + D+E TGLD ER I+EI + + N N + V S + + + Sbjct: 45 LAHLPERFVVFDIETTGLDSERHEILEIGAIRVNRNSNNHD-TFQVLVKPSRKVPKKITE 103 Query: 61 WNVRTHTASGLVERVK-ASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 +G+ + A + A +F AG + + D F+ K Sbjct: 104 -------LTGITPEMIEAEGVSLESAVQDFAKF------AGNLRLVSFNAEFDMAFISKA 150 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDG----FTKQGT------HQAMDD 163 + F VS +++RR P+ K G H+A+ D Sbjct: 151 AGKSSITFANP---VSCALKMSRRAWPDRKSYRLAEIAKDGNLDTSDMHRALGD 201 >UniRef50_B0P1Y1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P1Y1_9CLOT Length = 235 Score = 108 bits (271), Expect = 8e-23, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 22/181 (12%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + + DLE TGL P+ D+IIEI + ++ +H E + + Sbjct: 2 KDYVAFDLETTGLSPDSDQIIEIGAVKIRDGK--ISGKYNCIIHPEIEVSDFIIN----- 54 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + + +E LEF +G PI G+++ D +F+ + Sbjct: 55 --LTGISRDMLRKGIPLKEGVEEFLEF------SGDLPILGHNVMFDYKFMKMAAASFKY 106 Query: 126 YFHYRYLDVSTL--KELARRWKPEIL-----DGFTKQGTHQAMDDIRESVAELAYYREHF 178 F +D + K L ++ + Q H+A DD + ++ F Sbjct: 107 PFEKTGVDTLKVARKLLTGLENKKLETLCAHYHYVNQAAHRAYDDALATAVVFEQMKKEF 166 Query: 179 I 179 Sbjct: 167 P 167 >UniRef50_C0EF57 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EF57_9CLOT Length = 319 Score = 108 bits (270), Expect = 9e-23, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 65/176 (36%), Gaps = 29/176 (16%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + IDLE TG DP RD IIE+ L + E + + + Sbjct: 19 PTDYVVIDLETTGYDPHRDEIIELGALRIHEG--EVVESFSSLTKPQRDLDDYIIQ---- 72 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM-PEL 123 +G+ + AS + L+F+ G S + G+++ D F++ E Sbjct: 73 ---LTGISNEMLASAPELSDVFPRYLDFI------GDSIVVGHNVHFDVNFIYDTCIKES 123 Query: 124 EAYFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVA 169 F +D L L+R+ P++ +G H+++ D + + Sbjct: 124 LKLFTNDLVD---LLWLSRKLLPDLTSHKLCRVSSHFNICVEGMHRSLFDCKTTFE 176 >UniRef50_C7H779 DNA polymerase III, alpha subunit n=5 Tax=Clostridiales RepID=C7H779_9FIRM Length = 1417 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 57/171 (33%), Gaps = 27/171 (15%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + D E TGLDP + + EI ++ + E V + + Sbjct: 392 PLDGEFCVFDTETTGLDPGVEYLTEIGAVIVRNG--EVVEEFDTFVKPGKPITPKITE-- 447 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 +G+ + A G++EA A L F G+ + N+ D RFL Sbjct: 448 -----LTGITNEMVADAPGEKEALEAFLRF-----ADGRILVAHNAHAFDIRFLKAAAKR 497 Query: 123 LEAYFHYRYLDVSTLKELARRWKPEILDG----------FTKQGTHQAMDD 163 F Y+D T+ A+ P + + H+A +D Sbjct: 498 SGISFEPTYIDTLTM---AQAMYPGLHNYKQGTINKHLELPSYEAHRACED 545 >UniRef50_Q0FXM2 Exonuclease, DNA polymerase III, epsilon subunit family protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXM2_9RHIZ Length = 466 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 22/174 (12%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 D E TGL P RD I++I + + E V + H Sbjct: 274 YCVFDTETTGLIPHRDEIVQIGAIRIVDGKLVEGETFDTLVDPGGPIPRASS----KIH- 328 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 G+ +++ EA EF K+ S + ++ D FL ++ + F Sbjct: 329 --GITDKMVMGQPRIAEAGRRFFEFSKE------SVLVAHNAPFDMSFLRRHEKAMGVAF 380 Query: 128 HYRYLD---VSTLK--ELARRWKPEILD----GFTKQGTHQAMDDIRESVAELA 172 + +D VS + R + + K+ H A+ D R + + Sbjct: 381 DHPIVDTVLVSAIIFGTTERHMLDVVCERLGIRIEKKDRHTALGDARVTAEAMK 434 >UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammaproteobacteria RepID=Q21I25_SACD2 Length = 485 Score = 107 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 65/204 (31%), Gaps = 35/204 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + W D E G +P DR + A + TD +LNI+ E I ++ + + Sbjct: 2 QKTFYWHDYETWGANPAVDRPSQFAGVRTDMDLNIIGEPLVIYCKPPEDIWPN-PEACL- 59 Query: 65 THTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD---------RR 114 +GL + A + +RE ++ G + NSI D R Sbjct: 60 ---VTGLTPQETLAKGVTEREFIKQI---HRELAKPGTCGVGYNSIRFDDEVTRYTLYRN 113 Query: 115 FLFKYMPELEA-YFHYRYLDVSTL----------------KELARRWKPEILDGFTKQGT 157 + Y E + +D+ L K R ++G Sbjct: 114 YFDPYEREWRNGNSRWDIIDMVRLCYALRPEGIEWPVVDGKPSFRLENLTKVNGIVHASA 173 Query: 158 HQAMDDIRESVAELAYYREHFIKL 181 H A D+ ++ RE L Sbjct: 174 HDAYSDVEATIKLARLVREKQPAL 197 >UniRef50_C1DWW1 DNA polymerase III PolC-type (PolIII) n=4 Tax=Hydrogenothermaceae RepID=C1DWW1_SULAA Length = 205 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 67/198 (33%), Gaps = 35/198 (17%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++ E + + +DLE TGL+P IIEIA L + I+ + V S + Sbjct: 4 LTIEEASFLIVDLETTGLNPVNSEIIEIAALRVEGG--IVVDKFHTLVKPS------IGF 55 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 +G+ + E L+F + S I ++ D FL Sbjct: 56 IPTYITKLTGITNALVVDKPTIEEVFPQFLKFSE------NSIIVAHNAQFDMSFLNSVS 109 Query: 121 PELEAYFHYRYL--DVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESV 168 ++ R + V + LA+R P++ H+A++D + Sbjct: 110 YQITG----RSIQNPVLCTQNLAKRLFPDLPSKSLVNLAYHFNIPYNKKHRALEDALVTY 165 Query: 169 AELA-----YYREHFIKL 181 Y + K+ Sbjct: 166 ELFKKIIDYLYMFNINKV 183 >UniRef50_A9BIM3 DNA polymerase III, alpha subunit n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIM3_PETMO Length = 1388 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +E + DLE TGL+P + IIEI + N+ I+++ V ++ Sbjct: 378 SETEFVVFDLETTGLEPAMNEIIEIGAVKI-KNMKIVSK-FHRLVKPRKPVSNFTSNF-- 433 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ ++ E L F++ G + N+I D RF+ +++ + Sbjct: 434 -----TGITNQMLEVEKPIEEVLPQFLSFIE-----GAVLVAHNAI-FDYRFIREWVRRV 482 Query: 124 -EAYFHYRYLDV----STLKELARRWKPEILDGFTKQ--GTHQAMDDI 164 +F Y+D +L L ++++ H+A +D Sbjct: 483 YNEHFEQTYIDTVALSKSLLTLKSYGLAKVVEELKLGSFEHHRAHEDA 530 >UniRef50_C7MCE6 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCE6_BRAFD Length = 551 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 59/184 (32%), Gaps = 25/184 (13%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E L+ +DLE TG DP D I EI + +L E V A + Sbjct: 18 EATLVVVDLETTGTDPAADAITEIGAVKVRGG-EVLGE-FRTFVDPERPIPAYIA----- 70 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + +G+ + A R L+F AG + + ++ D FL E Sbjct: 71 --SLTGITDAAVAEAPSIRTVLPMFLDF------AGDAALVAHNARFDIGFLSAQAAACE 122 Query: 125 AYFH-YRYLDVSTLKELARRWKPEILDGF----TKQGT-----HQAMDDIRESVAELAYY 174 + R LD L R G H+A+ D R +V L Sbjct: 123 ITWPRPRVLDTLALARTVFRRDEVRDHRLSTLARHVGAGITPDHRALSDARATVDVLHAI 182 Query: 175 REHF 178 E Sbjct: 183 IERL 186 >UniRef50_A9F4T5 DNA polymerase III, epsilon subunit n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F4T5_SORC5 Length = 258 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 54/183 (29%), Gaps = 31/183 (16%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + ++D+E TG DP DRIIE+ ++ + +H A Sbjct: 42 DQPIAFVDVETTGRDPAGDRIIELGIVI--GRSGEILTRYNWLIHPGRPIPAEST----- 94 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM---- 120 G+ + E L K +P + DR FL + Sbjct: 95 --AIHGIKDADVEGKPSFAEVAEEILGCFKGAIP------AAYNATFDRSFLLAELERVG 146 Query: 121 --PELEAYFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESV 168 P R +D AR G + + H+A DD ++ Sbjct: 147 MRPREPPPAMRREVDWVDPLTFARELYKNEESRALGDMAARLGISLEKAHRATDDAEAAL 206 Query: 169 AEL 171 L Sbjct: 207 QVL 209 >UniRef50_Q03C57 3'-5' exonuclease and CRISPR-associated protein cas2 n=3 Tax=Lactobacillus RepID=Q03C57_LACC3 Length = 301 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + +D+E TGLD ERD II I + ++N E T V+ Sbjct: 129 PFVALDIETTGLDAERDAIIAIGAVK-GPSVNET-EKFTTLVNPRR-------PLPSTVA 179 Query: 67 TASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +GL E + A+ + EA A +F G P+ G ++ D FL E Sbjct: 180 KLTGLSAEELVANGISLSEAVQALRDF------TGSLPLVGYNLRFDMGFLSAAGRETGL 233 Query: 126 Y-FHYRYLDVSTLKELARRWKPEIL-------DGFTKQGTHQAMDDIRESVAEL-AYYRE 176 F + D+ L + + R+ + H A+ D ++A ++ Sbjct: 234 TSFGNQTFDLLPLVKKSSRFLDNYKLSTVLAHYQIDNEQPHHALSDATATMALADKLIKK 293 Query: 177 HFIKL 181 + + Sbjct: 294 GILTI 298 >UniRef50_D0MI24 DNA polymerase III, epsilon subunit n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MI24_RHOM4 Length = 565 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 28/174 (16%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +D E TG P DRIIE+A + + E ++ + Sbjct: 8 FVVVDTETTGSGPA-DRIIELAAVRVQGGR--IVERFATLINPGRSVPPFIT-------R 57 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ + E L+FL G + +++ DR+ L + + Sbjct: 58 LTGITTAMLVGRPSADEVLPDFLDFL------GDGVLVAHNLAFDRKMLEAELQRIG--L 109 Query: 128 HYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVAEL 171 + LARR P + + H+A+ D + L Sbjct: 110 AWPGNPALCTLRLARRLLPGLPAKGLDGLIRFYQIPVENRHRALGDAEATAHVL 163 >UniRef50_B8CW68 DNA polymerase III, alpha subunit n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW68_HALOH Length = 1397 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 29/182 (15%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + DLE TGL+ ++ IIEI + + ++ E + V + + + Sbjct: 385 FVVFDLETTGLNKFKNEIIEIGAVKVKSG-KVIDE-FSSFVKPGESIPNKITE------- 435 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ + + LEF+ S + ++ D FL + + Sbjct: 436 LTGITNEMVSRAPDIEGVIGDFLEFI------DGSILVAHNADFDYGFLQVALKKTGQGD 489 Query: 128 -HYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVAELAYYRE 176 Y LD TL +R P++ + H+A++D R + + Sbjct: 490 ISYPVLDTLTL---SRALLPDLSNHKLNTLARHLNVRLDNHHRAVEDARATSEIFINFLS 546 Query: 177 HF 178 + Sbjct: 547 NI 548 >UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellular organisms RepID=Q21WQ6_RHOFD Length = 485 Score = 106 bits (265), Expect = 4e-22, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 68/208 (32%), Gaps = 36/208 (17%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S + + +W D E G + RDR + A + TDA LN++ + + + L Sbjct: 4 SPSHHTFLWHDYETFGTNTRRDRPAQFAAIRTDAELNVIGAPLMLYCQPAGDFLPDP--- 60 Query: 62 NVRTHTASGLVER-VKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD-------- 112 + +G+ + + + + + + G + N+I D Sbjct: 61 --QACLITGITPQLCLEKGIPEYQFAAQIE---QAFSLPGTVGVGYNTIRFDDEITRFMF 115 Query: 113 -RRFLFKYMPELEAYF-HYRYLDVSTLKELARRWKPE-----------------ILDGFT 153 R + Y E + + LDV R E +G Sbjct: 116 WRNLIDPYAREWQNDCGRWDLLDVVRTAYALRPDGMEWPLNAEGKPSFKLTDLSAANGLL 175 Query: 154 KQGTHQAMDDIRESVAELAYYREHFIKL 181 + H A+ D+R ++A + KL Sbjct: 176 HEAAHDALSDVRATIALARLIKTAQPKL 203 >UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Thermomicrobia (class) RepID=B9KXM0_THERP Length = 693 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 61/181 (33%), Gaps = 23/181 (12%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + +D+E TGL P R RIIEI + + + E ++ V+ + Sbjct: 83 PRSFVALDVETTGLRPARHRIIEIGAVRYEDGCCV--ERFSVLVNPHRRLPVYIV----- 135 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + + A FL G+S + G ++G D FL + + Sbjct: 136 --RLTGIRDEDLLTAPSFVDVAAAFRVFL------GESTVIGYNVGFDLDFLNAELRRIG 187 Query: 125 AY-FHYRYLDVSTLKELARRWKPEILD-------GFTKQGTHQAMDDIRESVAELAYYRE 176 LDV L G + H+A+ D + + E Sbjct: 188 QGPLPNPALDVLPLARALLTANGRYDLDAICRSIGLARGTRHRALPDAEATAVLYLHLVE 247 Query: 177 H 177 Sbjct: 248 R 248 >UniRef50_C0W351 DNA polymerase III epsilon subunit n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W351_9ACTO Length = 547 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 21/178 (11%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E + +DLE TG P I EI + + + + V+ A + Sbjct: 28 ETTFVVVDLETTGAGPGSHTITEIGAVRVRGG--QVEDELSTLVNPGRAIPAQIT----- 80 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + A EA L++ + W ++ + ++ D L LE Sbjct: 81 --VLTGITNAMVAGAPPVPEALERFLQWARLW--EEETVLVAHNARFDVGHLRGAARALE 136 Query: 125 AYFH-YRYLDVSTLKELA---------RRWKPEILDGFTKQGTHQAMDDIRESVAELA 172 +H R LD L A R G + TH+A+DD R +V L Sbjct: 137 LDWHEPRVLDTLALARRAWTRSEVPNHRLATLASFVGSPTRPTHRALDDARATVDVLH 194 >UniRef50_C1CX37 Putative DNA-directed DNA polymerase (DNA polymerase III, epsilon subunit) n=1 Tax=Deinococcus deserti VCD115 RepID=C1CX37_DEIDV Length = 202 Score = 106 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 62/175 (35%), Gaps = 25/175 (14%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLAL-MDDW-NVR 64 N++ DLE TGL PERD I+EI L V ++ M W R Sbjct: 2 NVVVFDLETTGLSPERDGIVEIGALRVVNGQVHEHLRYETLVRPTNAAGERLMIPWHAQR 61 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H G+ + S E LEF+ G S + +++G D F+ L Sbjct: 62 VH---GISNEMVRSAPTIEEVLPEFLEFV------GDSAVVAHNVGFDCGFMRAQARRLG 112 Query: 125 AYFHYRYLDVSTLKELARRWKPEILD------------GFTKQGTHQAMDDIRES 167 + +L+RR P+ F G H++ D++ + Sbjct: 113 MVWAPAG--EHCTVQLSRRAFPKERAHNLTVLAERLGLNFAPGGRHRSFGDVQVT 165 >UniRef50_Q67NP5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67NP5_SYMTH Length = 958 Score = 106 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 54/168 (32%), Gaps = 22/168 (13%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + + ID+E TG PE DR+IE+A + + I + + R Sbjct: 4 RSFVAIDVETTGTSPEHDRLIEVAAVRFEDGREI--GCFSRLIDPGC-------PVPQRI 54 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + A E FL G P+ ++ D FL Sbjct: 55 QHLTGIHPAMLAGKPRIEEVVPDLASFL------GDLPLVAHNAPFDVAFLQAAFARAGR 108 Query: 126 YFHYRYLDVSTLKELA-------RRWKPEILDGFTKQGTHQAMDDIRE 166 D + L +A R L G + H+A DD R Sbjct: 109 SLPNWSYDTAELARVALPLARNHRLATLAELLGLPLEHHHRAEDDARA 156 >UniRef50_C4LI21 Putative uncharacterized protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LI21_CORK4 Length = 616 Score = 106 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 53/179 (29%), Gaps = 27/179 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +DLE TGL DRIIEI + I + V L+ + Sbjct: 31 NTTFVVVDLETTGLSAHEDRIIEIGAVKIHGGEEI--SRFSTFVDPGRLIPPLITN---- 84 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + +A LEF + G + N+ D FL Sbjct: 85 ---ITGISDDDVNGAPKEAQAVKDFLEFAR-----GTVLVAHNA-RFDIGFLQAASMRAH 135 Query: 125 AY-----------FHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELA 172 LD + + T TH+A+DD +V Sbjct: 136 ITWPQPTHLCTLVLARTMLDRCAV-GSFKLSSLARHFHATTTPTHRALDDALATVTVFH 193 >UniRef50_C1DBV5 Probable DNA-directed DNA polymerase III n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBV5_LARHH Length = 493 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 55/174 (31%), Gaps = 31/174 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + +DLE TG RDRI EI + + + V+ +++ Sbjct: 3 DRPYVIVDLETTGGHITRDRITEIGLVEVSHG---VTTRWSQLVNPGQPIPPFIEEM--- 56 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + A E A L L GK I N+ D FL L Sbjct: 57 ----TGISDAMVAEAPPFAELAPALLARLN-----GKLLIAHNA-RFDYGFLKNEFRRLG 106 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDG------------FTKQGTHQAMDDIRE 166 F D +L+RR P+ H+A+ D Sbjct: 107 LTFTT---DPLCTVKLSRRLYPQHAKHSLDSLIARHGIDVPPGMRHRALGDAEA 157 >UniRef50_Q895Z5 DNA polymerase III alpha subunit n=1 Tax=Clostridium tetani RepID=Q895Z5_CLOTE Length = 380 Score = 105 bits (263), Expect = 6e-22, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 22/177 (12%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + + IDLE TGL P D+IIEI + + E ++ + Sbjct: 82 DEFVVIDLETTGLYPVTDKIIEITAIK--YKSGQIVEKYNTLINPKINIPKRATE----- 134 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 + + + + + L+F+K++ P+ ++ D +FL + + Sbjct: 135 --INNITNNMVKDSPVIEDVLPELLKFIKEY------PLVAHNASFDIKFLNANLALINR 186 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGFTKQ-------GTHQAMDDIRESVAELAYYR 175 +D L + P K+ +H+A+ D + Y Sbjct: 187 EIKNVAIDTLQLSRAMYTFLPNHKLTTIKEHLCISEDNSHRALPDCITTAEIYLDYC 243 >UniRef50_Q1LGD6 DNA polymerase III, epsilon subunit n=5 Tax=cellular organisms RepID=Q1LGD6_RALME Length = 530 Score = 105 bits (262), Expect = 7e-22, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 29/170 (17%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++++DLE TG D +RDRI EI + + + V L + + Sbjct: 33 RPIVFVDLETTGADAQRDRITEIGVVEVGPDGI---QEWDTLVDP----LTSIPPFVQ-- 83 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + + A E L+ G+ + N+ D FL Sbjct: 84 -GLTGITDEMVRGQPTFALIAEALAEKLQ-----GRLFVAHNA-RFDYGFLKNEFRRAGV 136 Query: 126 YFHYRYLDVSTLKELARRWKPEIL----------DGFTKQGTHQAMDDIR 165 F DV L+R P + G T +G H+A+ D Sbjct: 137 TFR---ADVLCTLRLSRSLFPSVERHGLDALIARFGLTPKGRHRALADAE 183 >UniRef50_C5EVY5 DNA polymerase III subunit epsilon n=2 Tax=Clostridiales RepID=C5EVY5_9FIRM Length = 240 Score = 105 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 24/169 (14%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N+ I +DLE TGL+P++++I EIA L V D ++++ V+ A + Sbjct: 3 NSYIALDLETTGLEPKQEKITEIAALKVVDG---VISQRYVTFVNPGRSLGAYITQ---- 55 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + A E ++F G P+ G++I D FL Sbjct: 56 ---LTGITDGMLADAPPIEELIEDVVKF------CGDLPLLGHNIRFDYSFLKHAAVNRR 106 Query: 125 AYFHYRYLDVSTLKELAR----RWKPE---ILDGFTKQGTHQAMDDIRE 166 F +D TL R + H+A D Sbjct: 107 LEFEREGIDTLTLCRAFMTGETRKNLSCACSYFHVPQSTAHRAQADAEA 155 >UniRef50_D1VLC1 DNA polymerase III, epsilon subunit n=1 Tax=Frankia sp. EuI1c RepID=D1VLC1_9ACTO Length = 615 Score = 105 bits (262), Expect = 8e-22, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 25/179 (13%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + + DLE TG P I E + ++AE V S L+ Sbjct: 48 RDVTFVVFDLETTGTGPTTAEITEFGAVKVRGG-EVVAE-FATLVRASTGIPPLIT---- 101 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ + + A+ E A LEF++ G + N+ G D FL + Sbjct: 102 ---VLTGITDAMLATAPPLAEVLPAFLEFIQ-----GTVLVAHNA-GFDLSFLKAACERV 152 Query: 124 EAYFH-YRYLDVSTLKEL---------ARRWKPEILDGFTKQGTHQAMDDIRESVAELA 172 + +LD + L + L + H+A+ D R +V L Sbjct: 153 GYPVPTWEHLDTARLARRIVTRDESPNNKLSSLARLFRARTEPCHRALADARATVDVLH 211 >UniRef50_D1VSB7 DNA polymerase III, alpha subunit, Gram-positive type n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSB7_9FIRM Length = 1415 Score = 105 bits (262), Expect = 9e-22, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 24/170 (14%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N + D+E TGL P RD+I EI + + D I+ E + ++ + + Sbjct: 399 NTYVVFDIETTGLSPIRDKITEIGAVKIVDG---IITERFSQLINPQMLIPEKVQE---- 451 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + + + E +F+K S + ++ D F+ + E + Sbjct: 452 ---LTRITNALVENEPTIEEVAPKFYDFIK------DSVLVAHNAKFDTAFIRRVFKEND 502 Query: 125 AYFHYRYLDVSTLKELARRWKPEI-------LDGFTKQGTHQAMDDIRES 167 F LD + + + G + G H+A++D + Sbjct: 503 LDFINPILDTLSFARATVKDTKKFNLATLCKKFGVSLVGAHRAVNDAEAT 552 >UniRef50_C7RGM9 DNA polymerase III, alpha subunit n=5 Tax=Anaerococcus RepID=C7RGM9_ANAPD Length = 1365 Score = 104 bits (261), Expect = 9e-22, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 57/183 (31%), Gaps = 26/183 (14%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E + + DLE TGL +DRI EI + + E V+ + + Sbjct: 346 EESFVVFDLETTGLSRYKDRITEIGACRVEGGK--ITEIYNELVNPEMVIPEKIIE---- 399 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + E L+F K S + G + D F+ + + Sbjct: 400 ---ITGITNEMVKDCPTIEEVLPGFLDFCK------DSILVGQNTDFDVGFVRENCHRMG 450 Query: 125 AYFHYRYLDVS-------TLKELARRWKPEILDGFTKQGTHQAMDDIRES----VAELAY 173 F+ YLD + + K H+A DD R + + Sbjct: 451 LDFNPIYLDTLPMARALFSDMKKFSLDKIARKLEIPAFNHHRASDDARATAQIFIKMFKM 510 Query: 174 YRE 176 E Sbjct: 511 IME 513 >UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 Tax=Haliangium ochraceum DSM 14365 RepID=D0LN23_HALO1 Length = 180 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 64/181 (35%), Gaps = 23/181 (12%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 L++ID E TGLDPER I+EIA + L E + + E+L D + Sbjct: 2 QPLVFIDCETTGLDPERHEILEIAAIRVHPQ--TLDEERELVLRVRPERLEDADPEALEV 59 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE- 124 +G R A + +A L+ + + G+++ DRRFL + Sbjct: 60 ---NGYRRRAWADAVSLGDAMAELAPMLE------GAVLAGHNVAFDRRFLEAAWDCVGH 110 Query: 125 --AYFHYRYLDVST----LKELARRWKPEILDGFTKQG-----THQAMDDIRESVAELAY 173 + LD + L + G H A DD+R S+ Sbjct: 111 RPENLDHHALDTAALAFPLLMAGEIDSLSLTPVCAHLGVLRGEEHWAFDDVRASLGVAQR 170 Query: 174 Y 174 Sbjct: 171 L 171 >UniRef50_B3R8V7 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (Modular protein) n=2 Tax=Burkholderiales RepID=B3R8V7_CUPTR Length = 532 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 61/176 (34%), Gaps = 33/176 (18%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD-- 59 +A ++++DLE TG D +RDRI EI ++ GP V M Sbjct: 27 AALSRPIVFVDLETTGADAQRDRITEIG---------VVEVGPDGIVEWETLLDPGMSIP 77 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 + R +G+ + + + E L+ G+ + N+ D FL Sbjct: 78 PFIQRM---TGISDDMVRGQPTFESLAESLAERLQ-----GRLFVAHNA-RFDYGFLKNA 128 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEIL----------DGFTKQGTHQAMDDIR 165 F DV L+R P + G T +G H+A+ D Sbjct: 129 FRRAGVTFR---ADVLCTVRLSRSLFPSVERHGLDALIARFGLTPKGRHRALADAE 181 >UniRef50_C7GFC6 DNA polymerase III, alpha chain n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFC6_9FIRM Length = 226 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 24/169 (14%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + + DLE TG+ D +IEI+ + N I+ E + V+ Sbjct: 15 RDYVLYDLETTGISSLYDEVIEISAVKVR-NGKIVDE-FSELVNPGRPIPYAAS------ 66 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI-GQDRRFLFKYMPEL- 123 + + + +++ + + L F AG + G++I G D +FL++ + Sbjct: 67 -SVNNISDKMVENARSFEKVLPEFLAF------AGDDVLAGHNIAGFDMKFLYRDCEKYF 119 Query: 124 EAYFHYRYLDVSTLKELA-------RRWKPEILDGFTKQGTHQAMDDIR 165 Y+D + +L + G + +G H+A+ D R Sbjct: 120 GQTLTNDYIDTLAIAKLCFPEWKHRKLSDLAEHYGISTKGAHRALADCR 168 >UniRef50_C2CW51 DNA polymerase III n=2 Tax=Bacteria RepID=C2CW51_GARVA Length = 307 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 30/182 (16%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++ +D E TGL D IIEI L N + + + S E + Sbjct: 20 DDYCVLDTETTGLSAYYDEIIEIGILRVRN--NEIVDRYDQLIKPSIEVDGFIT------ 71 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + + L F+ + + I G++ D RFL + + Sbjct: 72 -ALTGITNDMLEDMPSISSVKNDVLSFISEDI------ILGHNTSFDMRFLNEGF---KE 121 Query: 126 YFHYRYLDVSTLKELARRWKPEILDGF---------TKQGTHQAMDDIRESVAELAYYRE 176 +Y+D + AR+ PE+ H+A+ D + + Sbjct: 122 QLSNQYMDT---MQFARKLYPELKHHRLSDLTDYLGLHNNEHRALADCIATKELYDAVKS 178 Query: 177 HF 178 Sbjct: 179 RM 180 >UniRef50_Q1EM31 DNA polymerase III, alpha subunit n=1 Tax=uncultured Thermotogales bacterium RepID=Q1EM31_9BACT Length = 1428 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 22/172 (12%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + DLE TGL+P+ D IIEI + + + + V E A++ + Sbjct: 418 FLVFDLETTGLNPKEDEIIEIGAIKMKGS--EVLGTYSTFVKPEKELSAMIT-------S 468 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ E + + +E +F + + ++ D F+ + + Sbjct: 469 LTGITEDMLSEARPIKEVLPEFTKFTE------GCILVAHNASFDYGFVRNSVKKHFGGD 522 Query: 128 HY-RYLDVSTLKELARRWKPEILDGFTKQ------GTHQAMDDIRESVAELA 172 +D L + R K LD K+ H+A +D + + L Sbjct: 523 WEMPCIDTLALAKSLFRSKSYSLDNVVKRLKLGHFDHHRAFEDAKVTAEVLK 574 >UniRef50_C6LDW1 Helicase, RecD/TraA family n=4 Tax=Clostridia RepID=C6LDW1_9FIRM Length = 1010 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 24/165 (14%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + DLE TG+ + D +IEI+ + +A + + V+ + Sbjct: 25 YVVFDLETTGISSKYDEVIEISAVKVEAG--QVTGEFSTLVNPGRKIPPAAS-------R 75 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIG-QDRRFLFKYMPELEAY 126 +G+ +++ A + E F AG + G++I D +FL++ + Sbjct: 76 VNGITDKMVAGALPFSEVLGDFFAF------AGDFVLVGHNINSFDMKFLYRDAKKYFRK 129 Query: 127 F-HYRYLDVSTLKELA-------RRWKPEILDGFTKQGTHQAMDD 163 Y+D L A R G + +G H+A++D Sbjct: 130 VPDNDYVDTLLLARAALPELSHHRLVDLAEHYGISAKGAHRALND 174 >UniRef50_D2RB05 CRISPR-associated endoribonuclease Cas2 n=2 Tax=Gardnerella vaginalis RepID=D2RB05_GARVA Length = 359 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 19/174 (10%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + N + ID E TGL+ + D+IIEI + + S + Sbjct: 175 DKNFVVIDCETTGLNSKVDKIIEIGAVKFIDGKIEEFQKLININCDSVSNFNKNNFIPNE 234 Query: 65 THTASGLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ + S + A + F+++ P+ G ++ D FL + L Sbjct: 235 IIELTGITSNMLESYGVRLDLALKEFINFVER------LPVLGYNVQFDMSFLNSALSSL 288 Query: 124 EAYFHY-----RYLDVSTLKELARRWKPEI-------LDGFTKQGTHQAMDDIR 165 + F + + D+S + +++ + H+A+ D R Sbjct: 289 DERFDHSLSINKIFDISRFVKKEKKFLKNYQLKTVLHEYNIAESVPHRALLDAR 342 >UniRef50_C4FGI7 Putative uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 RepID=C4FGI7_9BIFI Length = 186 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 28/175 (16%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++ + +DLE TG+ P RDRIIEI + + + + V+ + Sbjct: 17 DDYVVVDLETTGISPARDRIIEIGAVRVEHG--TVTAEYSKLVNPGRPVGGFIT------ 68 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLF-KYMPELE 124 +G+ + + + L L+ + + N+ D FL+ M L Sbjct: 69 -GLTGISDEMVGNASPIEAVLPDFLAHLR----PSDTIVAHNA-NFDINFLYDNCMRTLG 122 Query: 125 AYFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVA 169 F Y ++D L+R P+ G + H+ + D ++V Sbjct: 123 KPFSYDFIDT---LRLSRALFPQERQHRLVDLIQRFGIADEEEHRGLSDALQTVE 174 >UniRef50_C5SPM0 DNA polymerase III, epsilon subunit n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SPM0_9CAUL Length = 717 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 52/184 (28%), Gaps = 28/184 (15%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + +D+E TG +R+ EI + + + ++ + + Sbjct: 541 PDQVYTVVDIETTGGQSANERVTEIGAVKIRNG--EIIDTWQSLINPERRIPPFITE--- 595 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ + + FLK G + N + D FL L Sbjct: 596 ----LTGISNAMVRDAPRFADIADDFDAFLK-----GTVFVAHN-VNFDYGFLSAEYRRL 645 Query: 124 EAYFHYRYLDVSTLKELARRWKP----------EILDGFTKQGTHQAMDDIRESVAELAY 173 E F Y + RR P G + H+A+ D + L Sbjct: 646 ERPFRYPKM---CTVASMRRHFPGLAAYGLGPLSREFGIELKNHHRALSDAMAAAELLKL 702 Query: 174 YREH 177 E Sbjct: 703 INER 706 >UniRef50_B9KXZ3 Exonuclease family n=2 Tax=Thermomicrobia (class) RepID=B9KXZ3_THERP Length = 982 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 58/174 (33%), Gaps = 26/174 (14%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +D+E TG+DPERD IIE+A + + E V + Sbjct: 2 PRIYVALDIEATGMDPERDEIIEVAAIKFREE--EVLERFETLVQPRR-------PVPLA 52 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + +GL R ++ +F++ + PI G S D + L + Sbjct: 53 VASLTGLTMRDLRRAPSFQQIAPRLRQFVRNY------PIVGQSPDYDLQMLSAH----G 102 Query: 125 AYFHYRYLDVSTLKELARRWKPEI-------LDGFTKQGTHQAMDDIRESVAEL 171 D L + P G + H+AM D+ ++A Sbjct: 103 LELRNPVYDTFRLATILLPDLPAYSLAGIAARLGISVAQQHRAMADVETTMAVF 156 >UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=EX1_ECOLI Length = 475 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 59/206 (28%), Gaps = 38/206 (18%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 ++ ++ D E G P DR + A + TD+ N++ E +D+ L Sbjct: 8 QSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL-- 65 Query: 65 THTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ + +A + + + N++ D Sbjct: 66 ---ITGITPQEARAKGENEAAFAARI---HSLFTVPKTCILGYNNVRFDDEVTRNIFYR- 118 Query: 124 EAYFHYRY--------LDVSTLKELARRWKPE--------------------ILDGFTKQ 155 Y Y + D+ + +PE +G Sbjct: 119 NFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHS 178 Query: 156 GTHQAMDDIRESVAELAYYREHFIKL 181 H AM D+ ++A + +L Sbjct: 179 NAHDAMADVYATIAMAKLVKTRQPRL 204 >UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacteria RepID=B6J811_COXB1 Length = 458 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 75/200 (37%), Gaps = 34/200 (17%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS + ++ DLE TGL+ D+II+ A + TD LN L I + + + + Sbjct: 1 MSNHRKTYLFYDLETTGLNKCFDQIIQFAAIRTDEALNELN-RHEILIRLNPDVIP--SP 57 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWV-PAGKSPICGNSIGQDRRFLFKY 119 + H S ++++ + AE+ + + Q V G + N++G D FL Sbjct: 58 EAMIIHRFS--IDQMLSGK-----AEIEAIREIHQSVNTPGTISVGYNTLGFDDEFLRFS 110 Query: 120 MPE--LEAYFH-YRY----LDVSTLKELARRWKPEILDGFTK----------------QG 156 L Y H Y +D+ L L +KP L+ Sbjct: 111 FYRNLLPPYTHQYDNFCGRMDLYPLTILYYLFKPNALNWPDPFDLKLENLSKANQLAEGQ 170 Query: 157 THQAMDDIRESVAELAYYRE 176 H AM D+ SVA Sbjct: 171 AHNAMVDVEASVALAKLLMN 190 >UniRef50_C9RRP7 DNA polymerase III, epsilon subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRP7_FIBSS Length = 905 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 22/165 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TGLD E+D IIE+A + + E V S +L + T Sbjct: 7 FVALDLETTGLDFEKDEIIEVALVRFENG--EPKENLDFLVKPSAVELRPFIE------T 58 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA-Y 126 +G+ + S F+ G PI ++ D +FL + ++ Y Sbjct: 59 LTGISKADLESASDFATIAGQICSFV------GDLPIVAHNAVFDSKFLKQTFTKVGISY 112 Query: 127 FHYRYLDVSTLKELARRWKPEI-------LDGFTKQGTHQAMDDI 164 + + D TL +A + P + H+A+ D Sbjct: 113 DSHVFWDSLTLSRIAFQDVPNHRLDTLVQELNIERSRAHRALPDA 157 >UniRef50_A5TTA5 DNA-directed DNA polymerase III alpha subunit n=17 Tax=Fusobacterium RepID=A5TTA5_FUSNP Length = 1454 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 69/189 (36%), Gaps = 35/189 (18%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +E + D+E TGL+ + IIEI + A + + + ++ + + Sbjct: 423 DEEEFVVFDIETTGLNSHTNEIIEIGAVKIKAGR--IVDRYSQLINPGRPIPYHITE--- 477 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + + + A+ E ++F+ G + + ++ D F+ + + + Sbjct: 478 ----ITSITDEQVANEPKIDEVIGKFIDFV------GDAVLVAHNAPFDMGFIKRDVKK- 526 Query: 124 EAYFHYRYLD----VSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVA 169 Y +D V ++AR P++ G + H+A+DD + + Sbjct: 527 -----YLNIDLQSSVIDTLQMARDLFPDLKKYGLGDLNKTLGLALEKHHRAVDDSQATAN 581 Query: 170 ELAYYREHF 178 + + + Sbjct: 582 MFIIFLDKY 590 >UniRef50_C4Z427 DNA polymerase n=2 Tax=Bacteria RepID=C4Z427_EUBE2 Length = 233 Score = 103 bits (258), Expect = 3e-21, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 29/179 (16%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N + +D+E TGL+P DRIIE+ + + + + V+ + + Sbjct: 3 NRYVALDIETTGLNPAVDRIIEVGMARVEDG--QITQKYSTLVYPGISVSERITE----- 55 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + EF+ W P+ G+++ D FL K Sbjct: 56 --LTGIHNEELTGKPRIEDIIGEITEFIGDW------PVLGHNVIFDFSFLKKAAVNNGL 107 Query: 126 YFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDD-IRESVAELAY 173 + +D +LARR PE+ +H+A DD + S+ Sbjct: 108 TINDDGIDT---LKLARRILPEVEHKSLSFLCQYFNIDPGRSHRAYDDAVSASLLYAKL 163 >UniRef50_A5D2F3 Putative uncharacterized protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2F3_PELTS Length = 937 Score = 103 bits (258), Expect = 3e-21, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 53/161 (32%), Gaps = 25/161 (15%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++ DLE TGLDP DRIIEI + +L I+ V+ + + Sbjct: 3 KEIVVCDLETTGLDPLSDRIIEIGLVRL-KDLKIVD-IYHTMVNPGRPLPLKIKN----- 55 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +GL + AS L F+ G +PI G++I D FL Sbjct: 56 --LTGLDDSDLASAPAFSGVREKVLGFI------GDAPIAGHNIRFDMGFLAAA---GGI 104 Query: 126 YFHYRYLDVSTLKELARRWKPEI-------LDGFTKQGTHQ 159 F D L LA P H+ Sbjct: 105 SFKNPAYDTVELARLAVPGLPTYRLESLCERLNVEAAARHR 145 >UniRef50_Q2NJG3 DNA polymerase III alpha subunit n=3 Tax=Candidatus Phytoplasma RepID=Q2NJG3_AYWBP Length = 1572 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 24/173 (13%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 E + DLE TGL RD+IIEIA + N N + E + + + + Sbjct: 477 KEATYVVFDLETTGLSNVRDKIIEIAGIKI-KNGNKIGE-FQKFIDPQQKLTKTITN--- 531 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + + + + + L F K + ++ D FL + EL Sbjct: 532 ----ITNITDEMLQGQQTIDQVLPQFLAFAK------DCVLVAHNASFDVDFLKEKAKEL 581 Query: 124 EAYFHY-RYLDV--------STLKELARRWKPEILDGFTKQGTHQAMDDIRES 167 + +D S L + + + + H+A+ D + Sbjct: 582 KISLEPKPIIDTMALSQRYFSNLLKYFSLKRLATVFKVKLEDHHRALADATAT 634 >UniRef50_D1AWZ0 DNA polymerase III, alpha subunit n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWZ0_STRM9 Length = 1465 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 22/175 (12%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E + D+E TG P D+IIEI + N +L + V+ + + Sbjct: 401 EEEFVVFDIETTGFSPINDKIIEIGAVKL-KNGKVLD-RFSEFVNPQTIIPKKIVE---- 454 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + + + LEF+K G + + N+ D F+ K +L Sbjct: 455 ---LTGINDNMVKDSDIIDKVMPRFLEFVK-----GTTLVAHNA-KFDVGFISKKCEDLN 505 Query: 125 AYFHYRYLDVSTLKELA----RRWKPEIL---DGFTKQGTHQAMDDIRESVAELA 172 + Y+D ++ +R+ + L + H+A+DD + Sbjct: 506 LETDFSYIDTLEWSKILVDDVKRFNLDTLTKRFNIKLENHHRAVDDANATAELFK 560 >UniRef50_A7B5W2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5W2_RUMGN Length = 219 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 31/179 (17%) Query: 1 MSANENNLI-------WIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDE 53 M N L+ DLE TG+ D IIEI+ + I+ + + V+ Sbjct: 1 MREKGNRLVQYVPDYTVFDLETTGISANMDDIIEISAVKVKGG--IVQDTFSTLVNPGRH 58 Query: 54 QLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI-GQD 112 A +G+ +++ + REA L F+ G+ + G++I D Sbjct: 59 IPAQAT-------KVNGITDQMVSEAPLIREAMTEFLRFV------GEDILVGHNIQSFD 105 Query: 113 RRFLFKYMPEL-EAYFHYRYLDVSTLKELA-------RRWKPEILDGFTKQGTHQAMDD 163 +F+++ + EL + ++D + R G + +G H+A++D Sbjct: 106 MKFIYREVEELFQETVSNDFIDTLYMARKCLPELKHHRLTDLAEHFGISSKGAHRALND 164 >UniRef50_Q8RA32 DNA polymerase III polC-type n=5 Tax=Clostridia RepID=DPO3_THETN Length = 1401 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 28/178 (15%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 ++ E + D+E TGL D IIEI + N I+ V+ + + Sbjct: 382 ASLEGEFVVFDIETTGLSNINDEIIEIGAVKI-KNKKIVD-TFETFVNPQIPISSFIT-- 437 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 +G+ E + E LEF K + + ++ D F+ Sbjct: 438 -----KLTGIDESMVKDAPLIEEVLPKFLEFAK------GAVLVAHNANFDVSFIKSKAK 486 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEILDG----------FTKQGTHQAMDDIRESVA 169 +L LD EL+R ++ + H+A++D + + Sbjct: 487 KLGLTVENTVLDT---LELSRHLYQDLKNYKLDTLAEFFEVKLLHHHRAVEDAKATAE 541 >UniRef50_B8FZZ1 DnaQ family exonuclease/DinG family helicase n=2 Tax=Desulfitobacterium hafniense RepID=B8FZZ1_DESHD Length = 929 Score = 103 bits (257), Expect = 3e-21, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 26/176 (14%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + ++ ID+E TG D D IIE A L + AE ++ + + + Sbjct: 3 KGKIVVIDIETTGFDIYNDEIIEFAALCIEEG--EEAEAFSVLISPRRQVPERI------ 54 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + L+ + + I G+++ D FL + L Sbjct: 55 -LRLTGISPEELKQAGSLQAYRDKILDLFQ------DAIIVGHNVEFDLGFLEQA---LT 104 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDG--------FTKQGTHQAMDDIRESVAELA 172 +F D + + P+ G + H+A+ D R + L Sbjct: 105 IHFENTLWDTLEIARILYPNMPKYKLGDLTKSLGLTPLEKAHRALFDARAAWELLQ 160 >UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPJ8_9GAMM Length = 482 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 79/209 (37%), Gaps = 37/209 (17%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS++E L W D E G+DP DR + A L TD +LN + E + + + D Sbjct: 1 MSSSET-LYWHDYETFGVDPGYDRPAQFAGLRTDLDLNPIGEPLVLYAKPPRDYVPHPDA 59 Query: 61 WNVRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD----RRF 115 +G+ + A+ + + + A L +++ G + NS+ D R Sbjct: 60 CL-----ITGITPQAALAAGVPEADFIKAIL---HEFMQRGTCAVGYNSLRFDDTVTRAT 111 Query: 116 LFKYM--PELEAYFHYRY-LDVSTLKELARRWKPEILDGFTKQG---------------- 156 L++ + P Y R D+ + A +PE L + Sbjct: 112 LYRNLRDPYAREYGDGRSRWDLIDIVRTAYALRPEGLIWPERDDGLPSFRLEDLCEANGL 171 Query: 157 ----THQAMDDIRESVAELAYYREHFIKL 181 H A+ D++ ++A +E +L Sbjct: 172 AQGRAHDALVDVQATIALARLLKERQPRL 200 >UniRef50_A1VJH5 Exonuclease, RNase T and DNA polymerase III n=8 Tax=Proteobacteria RepID=A1VJH5_POLNA Length = 220 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 67/190 (35%), Gaps = 31/190 (16%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A EN + +D E TGL+ D II I + N + +E + V +L + Sbjct: 37 APENEWVALDCETTGLNTRTDDIIAIGAVRIRDNRIMTSERLELLVRPEKRRL---SAES 93 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK-YMP 121 VR H L E+ A + EA + + F+ G P+ G + D + + P Sbjct: 94 VRVHR---LREQDVAQGISADEAMMKLMYFI------GSRPLVGYYLEFDLAMINRVLFP 144 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEILD-----------------GFTKQGTHQAMDD- 163 L ++VS++ + + H A++D Sbjct: 145 MLGMGLPQPKIEVSSMYYDYKFHQLPHHARDSGSIDLRFESLMKDLNLPLWSAHDALNDA 204 Query: 164 IRESVAELAY 173 I ++A L Sbjct: 205 IMAALAFLKL 214 >UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID=B0BNV2_ACTPJ Length = 514 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 66/209 (31%), Gaps = 40/209 (19%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + D E G+ P DR + A + TD++ NI+ E Q+ + L + Sbjct: 2 NKNLTFFFYDYESFGVSPALDRPAQFAGIRTDSDFNIIGEPVMFYCKQTPDYLPSPEAVM 61 Query: 63 VRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD--------- 112 V +G+ ++ A + + E ++ + N+I D Sbjct: 62 V-----TGITPQQCNAEGVPEPEFAARI---HAEFSQPNTCILGYNNIRYDDEMTRYTFF 113 Query: 113 RRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPE--------------------ILDGF 152 R F Y + D+ L +P+ +G Sbjct: 114 RNFFDPYEYSWKNGNSR--WDLLDLVRACYALRPDGIEWVIDENGMPNFKLENLTKANGI 171 Query: 153 TKQGTHQAMDDIRESVAELAYYREHFIKL 181 + H AM D+ ++A ++ KL Sbjct: 172 AHENAHDAMADVYATIAMAKLIKQKQPKL 200 >UniRef50_A7A526 Putative uncharacterized protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A526_BIFAD Length = 256 Score = 102 bits (256), Expect = 4e-21, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 27/183 (14%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +N IDLE TG P DRI+EI + + + + ++ + Sbjct: 84 DNYTSIDLETTGFSPSDDRIVEIGAIRVRNGRPV--KRYSQLINPQRPLPEEIT------ 135 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI-GQDRRFLFKYMPELE 124 +GL + + + + F+ G + G++I D FL L Sbjct: 136 -RLNGLTDADLRNQPTVDQVLPDFIRFI------GNDTLIGHNINEFDAAFLLANTTRLG 188 Query: 125 -AYFHYRYLDVSTLKELARRWKPEI-------LDGFTKQGTHQAMDDIRESV---AELAY 173 + + +D L +P+ G + +H+A DD ++ + Sbjct: 189 MRHIGNKTIDTLPLDRALYPEEPKHRLVDIIRRFGIAQTESHRAADDALQTAQCYETMKA 248 Query: 174 YRE 176 Y + Sbjct: 249 YMK 251 >UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z9I3_9GAMM Length = 483 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 37/209 (17%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS++E+ W D E +G + DR ++ A + TD N N+++E S + L Sbjct: 1 MSSSES-FYWHDYETSGANVFEDRPLQFAGVRTDKNFNVISEPLVHYCRPSPDCLLHPAA 59 Query: 61 WNVRTHTASGLVE-RVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD------- 112 +G+ + A + ++++ G + NS+ D Sbjct: 60 I-----RVTGISPYKALAEGANEGAFMAKIQ---REFMVPGTCALGYNSVRFDDEITRFA 111 Query: 113 --RRFLFKYMPELEAY-FHYRYLDVSTLKELARRW---KPEILDGFT------------- 153 R F Y E + +DV+ R P DG Sbjct: 112 LYRNFFPPYAREFGQNRSRWDLIDVARAIYALRPDGIVWPIREDGLPSFRLEDLTAANGI 171 Query: 154 -KQGTHQAMDDIRESVAELAYYREHFIKL 181 H A+ D+ ++A + L Sbjct: 172 DHGNAHDALADVLATIALAKLLSKAQPTL 200 >UniRef50_C8SCL6 DNA polymerase III, epsilon subunit n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SCL6_FERPL Length = 200 Score = 102 bits (255), Expect = 5e-21, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 27/185 (14%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 E +D+E TGL+ ++D II IA + D + +E + ++ + Sbjct: 2 REEKFAVVDVETTGLNVKKDEIISIAIIPMDGLKILFSEAYYRILKPRRFKIDSV----- 56 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + H G+ R+ E + LE L + + I G SI D FL K E Sbjct: 57 KYH---GITPRMVEEAPTFCEVKEEILEKLNERI------IVGYSINLDIEFLKKSFKEC 107 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQG-----------THQAMDD--IRESVAE 170 E F +Y+D++ +++L R + + T + H A+ D I + + Sbjct: 108 EVVFECKYVDIADVEKLVGRLFGDYMKDVTLEDLAKKYGVDVAYRHSALSDAYITAQIFQ 167 Query: 171 LAYYR 175 + R Sbjct: 168 MQLLR 172 >UniRef50_B8FYI4 DNA polymerase III, alpha subunit n=10 Tax=Clostridiales RepID=B8FYI4_DESHD Length = 1447 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 28/177 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +DLE TG ++I EI + + + V+ A + + Sbjct: 421 DTTYCVLDLETTGFSAATEKITEIGIMKIQGGK--IIDQFGCFVNPEKPIPARVVEV--- 475 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + + + + L F++ S + ++ D FL L Sbjct: 476 ----TNITDDMVRDAETIDQVFPKILNFIE------GSVLVAHNADFDMGFLKHNAKVLG 525 Query: 125 AYFHYRYLDVSTLKELARRWKPEIL----------DGFTKQGTHQAMDDIRESVAEL 171 F Y YLD +L A+ P+ G + H+A+DD+ +V Sbjct: 526 YDFDYTYLDTLSL---AKELFPDYKTYKLGRIAKNLGIKVEVAHRALDDVGTTVKVF 579 >UniRef50_B0UN90 Exonuclease RNase T and DNA polymerase III n=3 Tax=Rhizobiales RepID=B0UN90_METS4 Length = 223 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 60/190 (31%), Gaps = 27/190 (14%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + + +D E TGLDP RD I+ +A + + + +E V Sbjct: 26 PPPDEAVALDCETTGLDPRRDEIVAVAAIRIRGDRILTSESLRATVRSDRP----SSPEA 81 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 ++ H L+ A L F+ G PI G D R L K + Sbjct: 82 IKVHR---LLNAEIREAEPLDAVLPALLRFI------GGRPIVGYYTEFDVRMLDKSVRR 132 Query: 123 -LEAYFHYRYLDVSTLKELAR-RWKPEILD------------GFTKQGTHQAMDDIRESV 168 +DVS+L A+ R P+ + G H A +D + Sbjct: 133 QFGIRLPNPRIDVSSLYHAAKYRDAPDYVKIDLSFARILEDLGLPALPQHDAFNDALMTA 192 Query: 169 AELAYYREHF 178 R+ Sbjct: 193 MIYLQLRDLL 202 >UniRef50_D0WQJ6 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQJ6_9ACTO Length = 206 Score = 102 bits (254), Expect = 6e-21, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 56/174 (32%), Gaps = 25/174 (14%) Query: 10 WIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 +D+E TGL P RDRI+EI ++ D + E V+ L M V Sbjct: 5 VVDVETTGLSPVRDRIVEIGVVLLDESGEPEGE-WQSLVNP----LRGMGAVFVH----- 54 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 GL + A + G++ + N+ D FL H Sbjct: 55 GLTDADVADAPTLADLLPQIRGLFS-----GRALVAHNA-TFDVGFLNASFARAGYGMHV 108 Query: 130 RYLDVSTLKELARRWKPEILDGFTKQ---------GTHQAMDDIRESVAELAYY 174 EL++ + P G H+A+ D + L +Y Sbjct: 109 PREATVCTMELSKIYLPPGRHGLAAAAERAGVATAKRHRALADAHTAAGLLRHY 162 >UniRef50_Q10384 Uncharacterized protein Rv2191/MT2247 n=25 Tax=Actinomycetales RepID=Y2191_MYCTU Length = 645 Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 59/196 (30%), Gaps = 35/196 (17%) Query: 1 MSANENNLIWIDLE-----MTGLDPE-RDRIIEIATLVTDANLNILAEGPTIAVHQSDEQ 54 MS E + +DLE TG D D I EI + +L E V+ Sbjct: 36 MSLRETTFVVVDLETTGGRTTGNDATPPDAITEIGAVKVCGGA-VLGE-FATLVNPQHSI 93 Query: 55 LALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRR 114 + +G+ + + EF AG S + ++ G D Sbjct: 94 PPQIV-------RLTGITTAMVGNAPTIDAVLPMFFEF------AGDSVLVAHNAGFDIG 140 Query: 115 FLFKYMPELEAYFHYRYLDVSTLKELARRWK------------PEILDGFTKQGTHQAMD 162 FL + + V LARR L TH+A+D Sbjct: 141 FLRAAARRCDITWPQPQ--VLCTMRLARRVLSRDEAPSVRLAALARLFAVASNPTHRALD 198 Query: 163 DIRESVAELAYYREHF 178 D R +V L E Sbjct: 199 DARATVDVLHALIERV 214 >UniRef50_C5CGL7 DNA polymerase III, alpha subunit n=2 Tax=Thermotogaceae RepID=C5CGL7_KOSOT Length = 1430 Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 61/172 (35%), Gaps = 22/172 (12%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + DLE TGLDP D IIEI + ++ E + V + Sbjct: 419 YVVFDLETTGLDPSADEIIEIGAVKLKGT-EVIGE-FSSFVKPERNLSEKVT-------R 469 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL-EAY 126 +G+ +R E LEF K S + ++ D RF+ + +L Sbjct: 470 ITGISDRELEDAPSLSEVLPKFLEFCK------DSVLVAHNATFDYRFVRNAVKQLYNED 523 Query: 127 FHYRYLDVSTLKELARRWKPEILDGFTKQ------GTHQAMDDIRESVAELA 172 + Y+D L + + K LD K+ H+A +D R + Sbjct: 524 WKLPYIDTLALSKSLLKSKSYSLDNVVKRLKLGDFEHHRASEDARITAEVFK 575 >UniRef50_C7NEP7 DNA polymerase III, alpha subunit n=5 Tax=Fusobacteriaceae RepID=C7NEP7_LEPBD Length = 1459 Score = 102 bits (254), Expect = 7e-21, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 28/186 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + D+E TG DP D+IIEI + ++ E + V+ + + Sbjct: 422 DEIYVVFDIETTGFDPFNDKIIEIGAVKMRGR-EVIGE-FSEFVNPEIPIPQKITE---- 475 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + + + A+ LEF G + + N+ D F+ + + Sbjct: 476 ---LTTITDEMVANAEKIETVLPRFLEF-----CTGTTVVAHNA-KFDVGFIKQKTIDQG 526 Query: 125 AYFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVAELAYY 174 + +D LAR PE+ G T + H+A+DD + + + Sbjct: 527 LEYSPSVIDT---LPLARTLLPELRGYGLANLVKYFGITLETHHRAVDDAKATAEVFQKF 583 Query: 175 REHFIK 180 + Sbjct: 584 LNMILS 589 >UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group RepID=Q3B5G9_PELLD Length = 197 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 68/193 (35%), Gaps = 27/193 (13%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 ++W DLE TG+DP+R II+ A L ++AE I + + + Sbjct: 2 KKVLWFDLETTGIDPDRHGIIQFAGLAEIEG--VVAESFEIKMQPHEGAMIE-----DEA 54 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWV----PAGKSPICGNSIGQDRRFLFKYMP 121 SG AS EA A FL + V K G ++ D FL + Sbjct: 55 LAVSGFSREQIASFTPHAEAYKAIDGFLARHVSRFERNDKFYPAGYNVRFDLDFLSRMFR 114 Query: 122 ELEAY-----FHYRYLD---VSTLKELARRWKPEILD--------GFTKQGTHQAMDDIR 165 + Y ++R LD + + E R G + H A+ DI+ Sbjct: 115 RYDQYGLGSFINWRSLDPQPILNIMEYMGRLSLPNHKLQTVCEHLGVRLENAHDALSDIK 174 Query: 166 ESVAELAYYREHF 178 + + EH Sbjct: 175 ATRELMELLMEHV 187 >UniRef50_Q0A6Z2 Putative PAS/PAC sensor protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A6Z2_ALHEH Length = 714 Score = 101 bits (253), Expect = 9e-21, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 33/178 (18%) Query: 8 LIWIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + D EMTGL+PE D II IA + + E ++ + Sbjct: 509 FVVFDCEMTGLNPEGGDEIISIAGVRVVNGRVLTGETFDRIINPGRPIPPGSVRF----- 563 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 G+ + F+ G + + ++ D +F+ E Sbjct: 564 --HGITDDDVQDKPPIEVVLPQFKSFV------GDAVLVAHNAAFDMKFISMKEREAGVR 615 Query: 127 FHYRYLDVS-------------TLKELARRWKPEILDGFTKQGTHQAMDDIRESVAEL 171 F LD +L L R+ I G H A+ D + L Sbjct: 616 FDNPVLDTLLLSALLDGDEEDHSLDALCDRYGIAI------TGRHTALGDTLATAELL 667 >UniRef50_UPI0000510268 hypothetical protein BlinB_15797 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510268 Length = 581 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 61/181 (33%), Gaps = 24/181 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TG + I EI + T +L E V + + + R Sbjct: 31 FVIVDLETTGTTAGKSEITEIGAVKTRGG-EVLGE-FQSLVKPEESV---ISPFVAR--- 82 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ + R + LEF G + N+ D F+ +L+ ++ Sbjct: 83 LTGITHAMVDDAPSIRSVLPSFLEF-----CVGAVLVAHNA-PFDIGFIRSACEKLDYHW 136 Query: 128 H-YRYLDVSTL-KELARRWK--------PEILDGFTKQGTHQAMDDIRESVAELAYYREH 177 LD TL + + R + G H+A+ D + + L E Sbjct: 137 PQPTVLDTVTLSRRVVSRDEVRNHKLSTLAAHFGTEVSPDHRALSDAKATGEVLHRVLER 196 Query: 178 F 178 F Sbjct: 197 F 197 >UniRef50_B0S1A9 DNA polymerase III alpha subunit n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=B0S1A9_FINM2 Length = 1421 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 22/173 (12%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S N + D+E TGL ++I EI + N I+ E ++ + + Sbjct: 396 SMNLREFVVFDIETTGLSNATEKITEIGAVKIVDN-KIVDE-FNQLINPEIPIPEKITE- 452 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 + + + L+F+ G + ++ D F+ K Sbjct: 453 ------LTSITNEMVKDMPKIDAVLPEFLKFV------GDCTLIAHNADFDMGFIKKNCI 500 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEI-LDGFTKQ------GTHQAMDDIRES 167 +L Y+D LD TK+ H+A DD R + Sbjct: 501 DLGINPVRTYIDTLAFARALEPHLKNHKLDTLTKKYNVNLFNHHRACDDARAT 553 >UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacteria RepID=Q483M2_COLP3 Length = 487 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 55/213 (25%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++W D E G++P+ D+ + A + TD +LNI+ E + L Sbjct: 15 ILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEPEMFYCTPPVDYLPHP--------- 65 Query: 68 ASGLVERVKASTMGDREAELATL---EFLKQ----WVPAGKSPICGNSIGQD-------- 112 E + + ++A+ L EF + + NSI D Sbjct: 66 -----EACLVTGITPQKAQREGLSEAEFAARIHTLFTQPNTCVAGYNSIRFDDEVTRYLL 120 Query: 113 -RRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGF------------------- 152 R F Y E + D+ + +PE ++ Sbjct: 121 YRNFYDPYAREWQNGNSR--WDIIDMVRACYALRPEGINWPTVKRDGEEVISFRLELLTA 178 Query: 153 ----TKQGTHQAMDDIRESVAELAYYREHFIKL 181 + + H AM D+ ++A +E KL Sbjct: 179 ANDISHEAAHDAMSDVYATIAMAKLIKEKQPKL 211 >UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacteria RepID=A5CVQ8_VESOH Length = 473 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 68/205 (33%), Gaps = 38/205 (18%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 W D E G+ P+ DRI + A + TD N NIL E +++ L T Sbjct: 2 KTFYWYDYETFGISPKIDRISQFAGIRTDENFNILDEQM-FYCKPTNDCLLSP-----ET 55 Query: 66 HTASGLVERVKASTMGDREAELATLEFLK-QWVPAGKSPICGNSIGQD---------RRF 115 +G+ ++ E ++ + Q I NSI D R F Sbjct: 56 CLITGISPQLCEQK---GMIEHKFIKKIHAQLSTPDTCVIGYNSIRFDDEFTRYALYRNF 112 Query: 116 LFKYMPELEA-YFHYRYLDVSTL------------------KELARRWKPEILDGFTKQG 156 + Y + + LDV L K + + + + + Sbjct: 113 IDPYTWHWKNGNTRWDILDVVRLCYALKKDTSLKWVYDEQNKVIFKLDQLSLANNIEHTY 172 Query: 157 THQAMDDIRESVAELAYYREHFIKL 181 H A+ D+ ++A ++ +L Sbjct: 173 AHNALADVYATIAIAKIIKKTQPQL 197 >UniRef50_A1BCD0 DNA polymerase III, epsilon subunit n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1BCD0_PARDP Length = 706 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 50/170 (29%), Gaps = 21/170 (12%) Query: 10 WIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 D E TGL+P + D II+I L + E V E + Sbjct: 518 VFDTETTGLNPAQGDEIIQIGALRILNGKLLRGERFDQLVDPGREIPPESIPY------- 570 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFH 128 G+ + E A + + + G+++ D RFL F Sbjct: 571 HGIHPEMVQGQPRIAEVLPAFHAYAS------DTVLVGHNVAFDMRFLQLKEAATGLRFD 624 Query: 129 YRYLDVSTLKELARRWKPEI-------LDGFTKQGTHQAMDDIRESVAEL 171 LD L +A+ +P G H A+ D + Sbjct: 625 QPVLDTLLLASIAQPHEPSHSLEAIAARLGVEITQRHNALSDALVTAEVF 674 >UniRef50_A5F9M6 DNA polymerase III, epsilon subunit related exonuclease n=2 Tax=Clostridium kluyveri RepID=A5F9M6_CLOK5 Length = 441 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 22/165 (13%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +N + +DLE TGL+P RD IIEIA N + + T V+ + + Sbjct: 129 DNFVVVDLETTGLEPTRDYIIEIAA--AKYENNEIIDTYTTLVNPEVFIPPNITN----- 181 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 + + + +E + F+ G+ P+ ++ D +FL + L Sbjct: 182 --INHIDNDMVKDCPEIKEVLPGFMNFI------GQLPLVAHNAPFDIKFLNANLALLGL 233 Query: 126 YFHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDD 163 Y + +D + + + Q +H+A+ D Sbjct: 234 YLNNPIIDTLPISRKLFSEIENHKLGTIKEYLNIDVQDSHRALPD 278 >UniRef50_A5KMD9 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KMD9_9FIRM Length = 279 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 61/184 (33%), Gaps = 29/184 (15%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + I DLE TGLDP + IIEI L ++E + + + Sbjct: 37 KSYIAFDLETTGLDPMNNEIIEIGALKVRDGK--VSERFMEFIKPQELISPAIT------ 88 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + AS R ++F ++ + + G++I D F Sbjct: 89 -GLTGISNDMVASARPARSVITDFIDFCEEDI------LIGHNIIFDYSFTKCTAAREGL 141 Query: 126 YFHYRYLDVSTLKELARRWKPEIL----------DGFTKQGTHQAMDDIRESVAELAYYR 175 F +D ++A++ PE+ + H+A D + Sbjct: 142 PFEKMGIDT---LKIAKKVHPELESKSLSALCEHYKIENKAAHRAYFDALATAKLYQTL- 197 Query: 176 EHFI 179 H+ Sbjct: 198 SHYF 201 >UniRef50_A8ES54 DNA polymerase III, epsilon subunit n=4 Tax=Epsilonproteobacteria RepID=A8ES54_ARCB4 Length = 203 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 26/179 (14%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 + +N + +D E TGL+P++D I+ I ++ N ++ + I + S + Sbjct: 25 TPPQNEYVSLDCETTGLNPKKDEILSIGAVLIKDNKILMRKTFNIFLKPSKDINIES--- 81 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 H L + + L+F+ G PI G I D + KY Sbjct: 82 IKVHH----LRQIDLNDALEPEIGIYQLLDFI------GSRPIVGYYIEFDMAIISKYTK 131 Query: 122 E-LEAYFHYRYLDVSTLKELARRWKPEILD------------GFTKQGTHQAMDDIRES 167 + L ++VS++ +R+ G H A++D + Sbjct: 132 KYLGIKLPNTPIEVSSIYYDSRKSTSNYGFIDLKFDTIMKNLNIPVLGKHDALNDAIMT 190 >UniRef50_Q2Z0D2 Rad3-related DNA helicases n=1 Tax=uncultured candidate division WS3 bacterium RepID=Q2Z0D2_9BACT Length = 965 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 55/173 (31%), Gaps = 24/173 (13%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A + +DLE TG+D DRIIE+ + +A+ V+ + + Sbjct: 23 AYPRTFVGLDLETTGVDSRVDRIIEVGAVRVVDGR--VADTFESFVNPGCPIPSDI---- 76 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 H +G+ + A E +EF+ G SPI + D FL + Sbjct: 77 --VH-LTGISDADVAGAPTIDEVLPRIIEFI------GGSPIVAHHAPFDTGFLDEAAGG 127 Query: 123 LEAYFHYR--YLDVSTLKELARRWKPEILDG-------FTKQGTHQAMDDIRE 166 R D L P +H+A DD R Sbjct: 128 RPGLLVGRGGVFDTLPLTRALLPRLPNHRLATAARFFDIPTGRSHRATDDARA 180 >UniRef50_A4J5B5 DNA polymerase III, epsilon subunit n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J5B5_DESRM Length = 930 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 25/175 (14%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 N + +DLE +GLD +D IIEI + I + + + V+ Sbjct: 3 NFVALDLETSGLDCLQDEIIEIGLVKMVDGKEI--DSFSTLIRPKGILP-------VKIK 53 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 +G+ + +E L+F+ P+ G+++ D FL +++ Sbjct: 54 RLTGIKDHELQDAPKLQEVLPVILQFIA------DLPLVGHNVKFDYDFLSTA---VQSP 104 Query: 127 FHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIRESVAELAYY 174 D L + R G H+A+DD R + L + Sbjct: 105 LANPLYDTLELSKYLMPGASNHRLGYLCSYLGIDIPNQHRALDDARGAAMLLIHL 159 >UniRef50_C7GFY3 DNA polymerase III PolC-type (Fragment) n=3 Tax=Clostridiales RepID=C7GFY3_9FIRM Length = 697 Score = 99.9 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 57/169 (33%), Gaps = 22/169 (13%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 ++ + DLE TG P++++IIEI + + E + V+ +++ Sbjct: 470 NLDDTYVVFDLETTGFSPDKNKIIEIGAVKVVHG--EITERFSTFVNPEVPIPYRIEE-- 525 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 + + + + +EF G + + ++ D F+ K Sbjct: 526 -----LTSIRDDMVIDAPKIETILPQFMEF------CGDAIMVAHNADFDMSFIIKNCER 574 Query: 123 LEAYFHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDI 164 + +D L + + G + + H+A+DD Sbjct: 575 QGIEKEFTIIDTVALARILLPQLNRFKLDTVAKALGVSLENHHRAVDDA 623 >UniRef50_C8WWI2 DNA polymerase III, alpha subunit n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WWI2_ALIAD Length = 1440 Score = 99.9 bits (248), Expect = 4e-20, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 29/181 (16%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +E + D E TGL+ D +IEIA + A + + + + + Sbjct: 423 DETEYVVFDTETTGLNAREDTLIEIAAVKVKAG--QIVDTYATLIDPERSLDPKIVE--- 477 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ + A REA +F + + + ++ D FL + L Sbjct: 478 ----LTGITNEMVAGQPKLREALDGFRQFAR------GAVLVAHNAEFDVGFLNQCAERL 527 Query: 124 E-AYFHYRYLDVSTLKELARRWKPEILDGFTKQ----------GTHQAMDDIRESVAELA 172 + +D LAR P + K H+A+ D + Sbjct: 528 GLDPWEQPVIDT---LALARVLYPGEKNYKLKTLTQKFSVDLVNHHRALADSEATAKVFV 584 Query: 173 Y 173 + Sbjct: 585 H 585 >UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria RepID=A4ADV7_9GAMM Length = 482 Score = 99.5 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 37/209 (17%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS++E W D E G+DP DR + A L TD +LN++ E I + + D Sbjct: 1 MSSSET-FYWHDYETFGVDPAYDRPSQFAGLRTDLDLNLIGEPLVIYAQPPRDYVPHPDA 59 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFL-KQWVPAGKSPICGNSIGQD----RRF 115 +G+ + + + E + + +++ G + NS+ D R Sbjct: 60 CL-----ITGITP---QTALAEGVVEAQFMSTILDEFMKPGTCAVGYNSLRFDDTVTRAT 111 Query: 116 LFKYM--PELEAYFHYRY-LDVSTLKELARRWKPEILDGFTKQG---------------- 156 L++ + P Y R D+ + A +PE L+ T+ Sbjct: 112 LYRNLRDPYAREYGDGRSRWDLIDVVRTAYALRPEGLNWPTRDDGLPSFRLEDLCKANGL 171 Query: 157 ----THQAMDDIRESVAELAYYREHFIKL 181 H A+ D++ ++A ++ +L Sbjct: 172 EQGQAHDALVDVKATIALARAIKDKQPRL 200 >UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZN4_HALNC Length = 495 Score = 99.5 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 69/201 (34%), Gaps = 33/201 (16%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ++ D E TG DP DR I+ A L T+ L + T+ S E L V Sbjct: 3 FLFYDFETTGSDPRCDRPIQFAALRTNDELEPIDSPLTLYATLSPEVLPHPQAVLV---- 58 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM-PELEAY 126 +G++ + AS+ G EAE A L + + G + NS+ D L L Sbjct: 59 -TGILPQTLASSGGRPEAEFAAL-IHAEMMQPGTCAVGFNSLRFDAELLRFMFWRNLRDP 116 Query: 127 FHYRY------LDVSTLKELARRWKPEILDGF--------------------TKQGTHQA 160 + + + DV R +PE + H A Sbjct: 117 YAHEWKSGNSRWDVLDAARAFRLLRPEGIHWPTDEQGAPTLRLEALTKVNVIAHANAHDA 176 Query: 161 MDDIRESVAELAYYREHFIKL 181 + D+ ++A R KL Sbjct: 177 LGDVEATLAFARLMRAQSPKL 197 >UniRef50_A5Z9S3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z9S3_9FIRM Length = 1474 Score = 99.5 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 52/170 (30%), Gaps = 22/170 (12%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + + DLE TG + D+IIEI + + + + + V+ ++ Sbjct: 404 HLNDRYVVFDLETTGFSAKSDKIIEIGAVKVENGK--IIDRFSTFVNPEIPIPFRIE--- 458 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 + + + + E +EF K S + ++ D F+ Sbjct: 459 ----KLTSINDEMVIDAPKIEEILPQFMEFCK------DSVMVAHNSDFDMSFIEANCKR 508 Query: 123 LEAYFHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIR 165 + + +D + + G H+A+DD Sbjct: 509 QDLECDFTVIDTVAMSRYLIIGLGRYKLDNVAKALGIVLDHHHRAVDDAE 558 >UniRef50_B9Z6P2 DNA polymerase III, epsilon subunit n=2 Tax=Chromobacterium group RepID=B9Z6P2_9NEIS Length = 476 Score = 99.5 bits (247), Expect = 5e-20, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 56/172 (32%), Gaps = 29/172 (16%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 E +DLE TG RDRI EI L+ D E V+ +++ Sbjct: 4 EQPCAIVDLETTGGHITRDRITEIGILLIDGERI---ERYETLVNPGQPIPPFIENM--- 57 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + + A LE L+ G+ + N+ D FL Sbjct: 58 ----TGISDAMVAEAPPFAALVETLLEKLQ-----GRLLLAHNA-RFDYGFLKNEFKRAG 107 Query: 125 AYFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRE 166 F +V +L+RR P+ G H+AM D Sbjct: 108 HVFQ---SEVLCTVKLSRRLYPQHFKHSLDSLIARHGIVLADRHRAMADALA 156 >UniRef50_C5CIX0 DNA polymerase III, epsilon subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIX0_KOSOT Length = 185 Score = 99.1 bits (246), Expect = 5e-20, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 62/174 (35%), Gaps = 33/174 (18%) Query: 8 LIWIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + ID E TG P R DRIIEIA + + V+ A + Sbjct: 5 YVVIDTETTGPSPLRGDRIIEIAAIPIYRGKMFVDLAFHSLVNPQIRIPAYIS------- 57 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 GL S + E+L G + I G+SI D +F E+ + Sbjct: 58 GIHGLKNEDVTSEPTISDVFPRFKEYL------GNAIIVGHSIEVDMKFFDIACKEIGTF 111 Query: 127 -FHYRYLDVS------------TLKELARRWKPEILDGFTKQGTHQAMDDIRES 167 +Y+D +L ELA+R K TH+A+DD R + Sbjct: 112 PLSNQYIDTLKIAKDLFKEGSYSLAELAKRLK------IKDAPTHRALDDARVT 159 >UniRef50_C8RRD8 Exonuclease n=2 Tax=Corynebacterium jeikeium RepID=C8RRD8_CORJE Length = 198 Score = 99.1 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 63/196 (32%), Gaps = 37/196 (18%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATL-VTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N I IDLE TGL P+ +RIIEIA L + + L + T ++ + + D Sbjct: 10 QNCIVIDLETTGLRPQEERIIEIAALHIRNGELQ---DKYTTLLNPNLSVPQEITD---- 62 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQ--WVPAGKSP-------ICGNSIGQDRRF 115 +G+ + + A E L FL+ S + G+++ D F Sbjct: 63 ---LTGISDGLLADKPTFSEVMPELLNFLRDATLTEPSTSLGFESTPRLVGHNVSFDFSF 119 Query: 116 LFKYMPE--------LEAYFHYRYLDVSTLKEL---------ARRWKPEILDGFTKQGTH 158 L + + R + + R + H Sbjct: 120 LQHEILRTQLKNSADANRPYTPRLVCTAEASRTLIPRESVGRYRLGNVASYLKIPHRPLH 179 Query: 159 QAMDDIRESVAELAYY 174 +AM D + L Sbjct: 180 RAMSDALATYDVLRAL 195 >UniRef50_C0DA77 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C0DA77_9CLOT Length = 255 Score = 99.1 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 28/170 (16%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N+ + ID+E TGL+P D+I EIA L + V+ + + Sbjct: 14 NSYVAIDIETTGLEPRLDKITEIAALRVVDGA--VEGRFVTLVNPGRPLGERIVE----- 66 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + + A + + F G P+ G++I D FL + Sbjct: 67 --LTGITDGMLAGAPAIGDVIGPLVRF------CGDLPLLGHNILFDYSFLKRAAVNQGL 118 Query: 126 YFHYRYLDVSTLKELARRWKPEILDG----------FTKQGTHQAMDDIR 165 F +D L R + P + H+A D Sbjct: 119 DFQREGIDTLNL---CRAFMPGEHKKNLSAACAFYCIEQVEAHRAEADAL 165 >UniRef50_B3R0M5 DNA polymerase III alpha subunit n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0M5_PHYMT Length = 1449 Score = 99.1 bits (246), Expect = 6e-20, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 24/169 (14%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + D E TGL D+IIEIA + N + + ++ E +++ Sbjct: 409 YVIFDFETTGLSKINDQIIEIAAIKI--QNNQIIDEFQTLINPQQELTPFIEN------- 459 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE-LEAY 126 + + + + L+F + S + ++I D FL + L Sbjct: 460 LTNISNQDLKNQPLIATILPKFLKFCE------NSILIAHNISFDMGFLVNQTKKHLNLK 513 Query: 127 FHYRYLDVSTLKELA-----RRWKPEILDGFTK---QGTHQAMDDIRES 167 + ++D L R + + L + K + H+AM D+ + Sbjct: 514 LNLPFIDTLNLARYCLDSNLRYFNLKSLAKYFKISFENHHRAMSDVLIT 562 >UniRef50_C0FNH3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C0FNH3_9FIRM Length = 228 Score = 98.7 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + DLE TG D +IEI+ + + + E + V+ + Sbjct: 17 YVLFDLETTGTSCIYDEVIEISAVKVRSGK--VVEEFSQLVNPKRPI-----PYAASM-- 67 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSI-GQDRRFLFKYMPEL-EA 125 + + + + A+ + L F AG + G++I D +FL++ L + Sbjct: 68 VNHISDEMVANEPDFGQVLPEFLTF------AGDDILVGHNIQTFDMKFLYRDCERLFQQ 121 Query: 126 YFHYRYLDVSTLKELA-------RRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 Y+D + +L R G + +G H+A+ D + + Y + Sbjct: 122 KLTNDYVDTLRVAKLCFPEWRHRRLSDLAEHYGISTRGAHRALTDCKMNQQVFEYLAKEL 181 Query: 179 IKL 181 K+ Sbjct: 182 EKM 184 >UniRef50_C1TRP3 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRP3_9BACT Length = 193 Score = 98.7 bits (245), Expect = 7e-20, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 26/184 (14%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 ++ + ID+E TGL DRI+EI + E V + V Sbjct: 7 DSGFVAIDVETTGLSNRWDRIVEIGAIRFTPGSET--ESFQTFVSPGRPIPSE----AVA 60 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H G+ + + G EA +A FLK + P+ ++ D FL M ++ Sbjct: 61 IH---GITDEMVEGAPGLSEASIALASFLK-----DEEPMVFHNPSFDLGFLDANMRAIK 112 Query: 125 AYFHYRYLDVSTLKELARRWKP----------EILDGFTKQGTHQAMDDIRESVAELAYY 174 + + V LAR+ P G + G H+A++D R S + Sbjct: 113 G--SWNVMPVFDTCGLARKAFPGIKGYSLVALARHFGLSGGGHHRALEDCRYSASLFNLI 170 Query: 175 REHF 178 E Sbjct: 171 LEAI 174 >UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BJV3_9GAMM Length = 517 Score = 98.7 bits (245), Expect = 8e-20, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 72/207 (34%), Gaps = 34/207 (16%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 + + + +W D E G P RDRI + A + TD +LNI+ E + + + +D Sbjct: 5 ATHPPSYLWYDYETWGTVPSRDRIAQFAAVRTDMDLNIIEEPINLFCKPDIDTV--IDPG 62 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQD--------- 112 V+ S L ++ + + + E A NSI D Sbjct: 63 AVQITRLSPL--ELEQTGLSEWEFSQAV---HNAMAQPNTCTTGYNSIRFDDECSRFLFY 117 Query: 113 RRFLFKYMPELEA-YFHYRYLDVSTLKELARRWKPE-----------------ILDGFTK 154 R + Y E + + LDV + R E +G + Sbjct: 118 RNLINPYEREWKNGNSRWDLLDVVRMTHALRPDGIEWPRRDDGSPSFRLEHLTAANGLSH 177 Query: 155 QGTHQAMDDIRESVAELAYYREHFIKL 181 H A+ D++ ++A R+ KL Sbjct: 178 ANAHDAVSDVKATIALAQLIRKQQPKL 204 >UniRef50_A5Z7T3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7T3_9FIRM Length = 237 Score = 98.7 bits (245), Expect = 8e-20, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 22/180 (12%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + + +D+E +G+ + D+IIEI + + + + ++ + + + Sbjct: 3 KDYVCVDIETSGIRVKWDKIIEIGAVKVRDGKAV--DTFSELINPGLKLSPYITE----- 55 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + + E +EF AG I G++I D FL + + Sbjct: 56 --LTGITDEMLKDKPFIEEVLPRFIEF------AGDDVIMGHNIMFDYSFLKQNAINQKL 107 Query: 126 YFHYRYLDV-----STLKELARRW--KPEILDGFTKQGTHQAMDDIRESVAELAYYREHF 178 F +D TLK L R G + H+A +D + E F Sbjct: 108 KFDKMGIDTLKIARKTLKGLESRGLEYLCNYYGIADENHHRAFNDAEVTSKLYNVLMEKF 167 >UniRef50_A9AEP6 DNA polymerase III, epsilon subunit n=55 Tax=Burkholderia RepID=A9AEP6_BURM1 Length = 398 Score = 98.7 bits (245), Expect = 8e-20, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 56/173 (32%), Gaps = 31/173 (17%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILA-EGPTIAVHQSDEQLALMDDW 61 A+E L+++DLE TG P RI EI + + L T V+ + Sbjct: 33 ASEQPLVFVDLETTGGTPAEHRITEIGVV----EIGPLGVSTWTTLVNPGQPIPPFIQQ- 87 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 +G+ + + E A E L GK + N+ DR FL Sbjct: 88 ------LTGISDAMVRDAPSFAELAPALFERL-----DGKLFVAHNA-SFDRGFLRAEFE 135 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDI 164 F+ DV L+R P G H+A+ D Sbjct: 136 RAGFAFNP---DVLCTVRLSRALFPRESRHGLDALIARHGLVPAARHRALADA 185 >UniRef50_B7V8D9 Probable nuclease n=6 Tax=Pseudomonas aeruginosa RepID=B7V8D9_PSEA8 Length = 208 Score = 98.4 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 26/174 (14%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +I +DLE T LDP R I+ I ++ ++ E + V A +R Sbjct: 30 EEVISLDLETTSLDPRRADILSIGAVLVRRGKLVMGERLELYVEPPPSLDAES----IRI 85 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE-LE 124 H L + +A L F+ G P+ G + D L +++ + L+ Sbjct: 86 HK---LRRADLEGQLQLEQALRQVLAFI------GDRPLLGYYLSFDVAVLNRHLRQLLD 136 Query: 125 AYFHYRYLDVSTLK-ELARRWKPE-----------ILDGFTKQGTHQAMDDIRE 166 H +++S+L R P+ G H A+ D + Sbjct: 137 RQLHNPSIEISSLYHRKVSRHFPDAHIDLRFDTLARALDVPVSGRHTALGDAQA 190 >UniRef50_B6FWT9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FWT9_9CLOT Length = 276 Score = 98.0 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 19/151 (12%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 + + I DLE TGL+ ++ I EIA + D + E V+ + + D Sbjct: 90 TKDPECYIVFDLETTGLEAHKEAITEIAAIKFDYD--EPVEYFHTYVNPKKKIREKITD- 146 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMP 121 +G+ + AS L+F+ ++ + +++ D F+ M Sbjct: 147 ------LTGITNEMVASAPPIEYVLPNFLKFIDKYT------LISHNVSFDMSFILDPMY 194 Query: 122 ELEAYFH-YRYLDVSTLKELARRWKPEILDG 151 L + +D LARR+ + G Sbjct: 195 NLGYKKPGNKAIDT---LALARRFMKDEDTG 222 >UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKT0_9SPHI Length = 245 Score = 98.0 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 59/172 (34%), Gaps = 21/172 (12%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + +++ DLE TG D DRI++IA + A+ + + ++ + + Sbjct: 4 KKPIVFFDLETTGTDTLNDRIVQIAIIKLAADGTKVEK--ERLINPTIPIP----PEVTK 57 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 H G+ + + + + EF++ G N + D L + Sbjct: 58 VH---GVSDEMVKDAPTFHQVAKSLFEFIR-----GCDLAGYNHLNFDMPLLIEEFARAG 109 Query: 125 AYFHYRYLDVSTLKELARRWKPE-------ILDGFTKQGTHQAMDDIRESVA 169 F + + ++ + P + + H AM D + ++ Sbjct: 110 VVFPEPDVQYIDVMKVYYHFHPRTLSAAYQLYCHKELENAHNAMADTQATLE 161 >UniRef50_Q67P96 DNA polymerase III alpha subunit n=2 Tax=Firmicutes RepID=Q67P96_SYMTH Length = 1475 Score = 98.0 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 23/167 (13%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + +D+E TG P D IIE+ + + + V + Sbjct: 453 EFVVLDIETTGFSPIGDDIIELGAVRCRGG--EIVDSFQSFVRPTKPVPP-------EVQ 503 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE-LEA 125 + + + EA A +F+ G + + ++ D FL + + L Sbjct: 504 KLTNITPDMLEGAPEAAEALRAFFQFV------GDAIVVAHNAQFDYSFLRYHRQKYLGE 557 Query: 126 YFHYRYLDVSTL-------KELARRWKPEILDGFTKQGTHQAMDDIR 165 F LD TL H+A D + Sbjct: 558 EFANPVLDTLTLARAVLPHMRSHSLAALTKELQVPLVDHHRADADAK 604 >UniRef50_Q7NC15 PolC n=1 Tax=Mycoplasma gallisepticum RepID=Q7NC15_MYCGA Length = 1501 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 58/163 (35%), Gaps = 14/163 (8%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIA-VHQSDEQLALMDDWNVRTH 66 + D+E TGL+ ++IIEIA + A LN+ + + ++ + + T Sbjct: 417 FVIFDIETTGLNAYYEQIIEIAAVRVKAELNVTNHQLEFVQIGKFEKLIKNKKPLSKFTT 476 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE-A 125 +GL + ++ + F+++ + N I D ++ + + + Sbjct: 477 QLTGLKDSDLKDAQDEKTVLEEFVNFIQK----DDVLVAHNGIDFDFIWINTKLDKYKLK 532 Query: 126 YFHYRYLDVSTL--------KELARRWKPEILDGFTKQGTHQA 160 LD L + ++ + K H+A Sbjct: 533 PLDNPMLDSLRLAYQLYQFKRYTLENLSLKLGYEYDKTLAHRA 575 >UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7J4_NATTJ Length = 864 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 37/189 (19%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 +N L+ D+E TGLD +D IIE+A L + ++ E L Sbjct: 497 QNKLVVFDVETTGLDTTKDEIIELAALKAGKDG-VVDEFHEY--------LRNSKP-VGE 546 Query: 65 THTASGLVERV-KASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + G+ ++V ++ + F+ + G+++ D + +L Sbjct: 547 SFQVHGISDQVLLEQGKPPEKSLASFTNFI------DDCDLVGHNVNYDITMVENQCKKL 600 Query: 124 ---EAYFH-YRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVA 169 + H Y +D+S RR+ P + + + TH+AMDD+ + Sbjct: 601 LNQDLELHGYDTVDIS------RRYFPRLEKYNLESLCEDLQISSKPTHRAMDDVEATFE 654 Query: 170 ELAYYREHF 178 L E Sbjct: 655 LLQILLEKI 663 >UniRef50_A9VVI2 Exonuclease RNase T and DNA polymerase III n=1 Tax=Bacillus weihenstephanensis KBAB4 RepID=A9VVI2_BACWK Length = 271 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 67/166 (40%), Gaps = 14/166 (8%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 DLE TGLD + ++++EIA + TD L I V L Sbjct: 14 FTVFDLETTGLDYKNEQVVEIAAIRTD--LEQELGRMHILVK-----LNEGKKLPDFLVD 66 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 + L + + + M + +A + + F+ G S + + D +LFK + E + Sbjct: 67 NTDLRDYMLVNGMVEHQALINLMAFM------GNSIVVAHYAPFDFAYLFKALIAPELFL 120 Query: 128 HYRYLD-VSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELA 172 R ++ + T + A G +G H+AM+DI ++ L Sbjct: 121 CTRSIERLLTPDKSASLAPTAERRGVKLEGAHRAMNDIEATIGVLK 166 >UniRef50_A4YW65 Putative uncharacterized protein n=2 Tax=Bradyrhizobium RepID=A4YW65_BRASO Length = 737 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 28/178 (15%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 E + + +D+E TG DRI EI + + L E ++ A + + Sbjct: 559 PEQDYVVVDIETTGSWSSGDRITEIGAVKVRNH--QLVEQWHSLINPQRPIPAKIVE--- 613 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 +G+ ++ E + + F+ G +++ D FL L Sbjct: 614 ----LTGITNQMVRDAPVFHEIADSFMAFM------GDGIFVAHNVNFDYGFLSSEFERL 663 Query: 124 EAYFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVAEL 171 E F + L RR P + G H+A+ D R + L Sbjct: 664 ERRFRFPKL---CTCVGMRRRYPGHTSYGLGKLCAIYGIELDDHHRALCDARAAAHLL 718 >UniRef50_B3DQ35 DNA polymerase III alpha subunit n=6 Tax=Bifidobacterium longum RepID=B3DQ35_BIFLD Length = 235 Score = 97.6 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 21/182 (11%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 + + +DLE TG P I EI + + + V+ + Sbjct: 31 PTDYVALDLETTGFYPNSCAITEIGAVRVREGH--IVDQFQQLVNPLRPIPRQIT----- 83 Query: 65 THTASGLVERVKASTMGDREAELATLEFLK-QWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 T +G+ + + A E + +L PI G+++ D RFL + Sbjct: 84 --TLTGITDAMVADLDPIDEVLPRFIAWLATPAAGPAVEPIVGHNVSFDLRFLDYNTRHI 141 Query: 124 E----AYFHYRYLDVSTLKELARRWK----PEILDGFTKQGTHQAMDDIRES---VAELA 172 A Y + +S A+R + G H+A+ D ++ + Sbjct: 142 AGCGFACADYDTMQISRALFPAQRHHRLADLIVRFGIADNEEHRALSDAIQTQQCFEWMR 201 Query: 173 YY 174 +Y Sbjct: 202 HY 203 >UniRef50_B1GYV2 DNA polymerase III epsilon subunit n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYV2_UNCTG Length = 198 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 29/187 (15%) Query: 5 ENNLIWIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +NL+++D+E TGLDPE+ I+EIA L + E V+ + Sbjct: 15 PDNLVFLDIETTGLDPEKGANIVEIAMLKVCGG---IEERYESLVNPGLPIPSE----CS 67 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + H + + + ++ E F+ G S + ++ D F+++ + Sbjct: 68 KIHA---IYDDMIKNSPSFDEIAGNVFSFI------GHSVVVCHNAPFDLLFVYRELYLA 118 Query: 124 EAYFHY-RYLDVSTLKE------LARRWKPEILDGFTKQGTHQAMDDIRESVAELAY--- 173 RY+D L + G + H+AM D+ + Y Sbjct: 119 GVPVKNIRYIDTLKLARQYFSFDSNKLGNIADAIGIEAELRHRAMADVLTMFSVAKYIFA 178 Query: 174 --YREHF 178 YR+ Sbjct: 179 NMYRKDI 185 >UniRef50_B7CAB9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAB9_9FIRM Length = 525 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 17/167 (10%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + D+E TGLD ++DRIIE+ ++ + + E + V+ + Sbjct: 50 KRYVAFDVETTGLDSKKDRIIEVGAILFENGHTV--ETYSSLVNPEVKIS-------KEA 100 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 T + + + + ++FL + PIC ++ D FL + + Sbjct: 101 TTINHITNGMVKKAPTEDIVCKELVKFLGDALHEQT-PICAHNADFDMSFLSQALMRQGY 159 Query: 126 YFHYRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIR 165 LD +L ++ + H+A+ D Sbjct: 160 DAQILCLDTLSLSRKIIPGLSNYKQTTVAKHFNIKNKQEHRAISDAE 206 >UniRef50_D0WQL3 Putative DNA polymerase III, epsilon subunit n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQL3_9ACTO Length = 589 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 26/177 (14%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TG P + I EI + + E + V+ A + + Sbjct: 44 FVVVDLETTGAKPGPESITEIGAVKVRGG-ETVGE-FSTLVNPGQPIPAFIT-------S 94 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ + A + +EFL + + ++ D L + + Sbjct: 95 LTGITTAMTARAPRIAAVIPSLIEFL---CAGPSTVVAAHNARFDVGHLKAAFAGADFTW 151 Query: 128 HY-RYLDVSTLKELARRWKPEILDGFTKQ-----------GTHQAMDDIRESVAELA 172 R LD L R + + + F H+A+DD R +V L Sbjct: 152 PSVRVLDTVALAR--RAFSSDEVPNFKLSTLAGACGATTAPNHRALDDARATVDVLH 206 >UniRef50_Q8EQD9 ATP-dependent DNA helicase n=3 Tax=Bacillaceae RepID=Q8EQD9_OCEIH Length = 939 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 24/185 (12%) Query: 6 NNLIWIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N + IDLE TG P + D+IIEI ++ + + + + T + + + Sbjct: 2 NRFVVIDLETTGHAPSKNDKIIEIGMVIIEGD--EIIDTKTTFFNPGQPIPPFITN---- 55 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + A E L+ L+ S I +++ D FL + E Sbjct: 56 ---LTGISDDDVADAPLFTEKALSIKSILE------DSYIIAHNVNFDLGFLNAELKENG 106 Query: 125 -AYFHYRYLDVSTLKELARRWKPEIL-------DGFTKQGTHQAMDDIRESVAELAYYRE 176 H + LD L + P H+A+ D + + Sbjct: 107 IDRLHNQVLDTVELSRILFPTAPGYKLSQLSDHFNLQHDDPHRALSDAYVTAKLFQKLMD 166 Query: 177 HFIKL 181 +L Sbjct: 167 KINQL 171 >UniRef50_Q049V0 DNA polymerase III, alpha subunit (Gram-positive type) n=3 Tax=Lactobacillus delbrueckii RepID=Q049V0_LACDB Length = 1411 Score = 97.2 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 55/178 (30%), Gaps = 29/178 (16%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M + + D+E TGL D IIEI + + + ++ + Sbjct: 385 MKYEDQEFVIFDVETTGLSSVYDTIIEIGAVKMKNG--EVIDRFDKFINPHHPLSETTIN 442 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 + + + + + + ++F G P+CG+++ D F+ + Sbjct: 443 -------LTSITDEMVQAADDEAVVIKQFMDFY------GNDPLCGHNVQFDVGFVDAAL 489 Query: 121 PELE-AYFHYRYLDVSTLKELARRWKPE----------ILDGFTKQGTHQAMDDIRES 167 +D E++R PE + H+A D + Sbjct: 490 KRCGYPEISQPVVDT---LEVSRLLHPEQSRHTLDSLCRKYNVALEHHHRANQDAEAT 544 >UniRef50_Q5P3L6 Nuclease subunit Cho of the excinuclease complex (UvrC homolog protein) n=2 Tax=Rhodocyclaceae RepID=Q5P3L6_AZOSE Length = 469 Score = 96.8 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 59/171 (34%), Gaps = 28/171 (16%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 + ++L+ ID+E TG +P DR+ EIA L + + V+ AL+ Sbjct: 2 SLPDSLVLIDVETTGANPVSDRVTEIAVLRIERG--EIVGRWESLVNPERPIPALIQRLV 59 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 G+ + + A E + L G + N+ D F+ Sbjct: 60 -------GITDEMVAGAPTFAELADSVRGHL-----DGAVFVAHNA-RFDYGFIRNEFSR 106 Query: 123 LEAYFHYRYLDVSTLKELARRWKPE----------ILDGFTKQGTHQAMDD 163 L F V +L+R PE GFT H+AM D Sbjct: 107 LGQQFE---ASVLCTVKLSRALYPEHHRHGLDALIERHGFTCGARHRAMGD 154 >UniRef50_C2D7T6 3'-5' exonuclease and CRISPR-associated Cas2 family protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D7T6_9ACTN Length = 337 Score = 96.8 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 24/171 (14%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 ++ + +D+E +GL+ D+IIEI + + + + S + Sbjct: 166 SDKKFVILDIETSGLNETDDKIIEIGAIRICD--KQVDDYQCLIKRDSLNLSPAITQ--- 220 Query: 64 RTHTASGLVERVKAS-TMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE 122 +GL + A+ + A +F+ G P+ G +I D RF+ + Sbjct: 221 ----LTGLTDIELANRGVNPNLALNGLKQFI------GHLPVLGYNIAFDMRFINNELRS 270 Query: 123 L-EAYFHYRYLDV-------STLKELARRWKPEILDGFTKQGTHQAMDDIR 165 + E R +DV E + G + H+A+ D + Sbjct: 271 MNEELLDNREIDVMRFIKKEKMFLESYALDNVLKVYGISATVPHRALGDAK 321 >UniRef50_C0WAB0 DNA polymerase III n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB0_9FIRM Length = 225 Score = 96.4 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 20/163 (12%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + ID+E TGLD R IIEI + ++ + E + + Sbjct: 57 YVVIDIETTGLDVARSAIIEIGAVHVRNGA--VSGRFQTFLTP--EPYQSLSPFITN--- 109 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPE-LEAY 126 +G+ + RE +FL G + G+++ D FL+ + + Sbjct: 110 LTGITDSDLVGAPTFREILPRLRDFL------GGYTLVGHNVNFDINFLYDRIYRETGEH 163 Query: 127 FHYRYLDVSTLKE--LARRWKPEILDGFTK----QGTHQAMDD 163 + YLD L + + + H+A+DD Sbjct: 164 LNNPYLDTKKLAKTVVPGLSHYSLEALCKHFGIAGNHHRAVDD 206 >UniRef50_Q89MS5 Blr4117 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89MS5_BRAJA Length = 223 Score = 96.0 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 60/188 (31%), Gaps = 27/188 (14%) Query: 3 ANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWN 62 A ++ + ID E TGL+ D ++ IA + N + + VH E A Sbjct: 27 APDDEFVVIDCETTGLNVRTDNVVAIAAIKIRGNRILTSARFEAIVHPDSELEAE----A 82 Query: 63 VRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY-MP 121 ++ H L ++ + L F+ G P+ G + D L KY +P Sbjct: 83 IKIHR---LRRSDVEASPIVWKVLPGFLHFI------GPRPLIGYYVDFDIAMLDKYILP 133 Query: 122 ELEAYFHYRYLDVSTLKELARRWKPE-------------ILDGFTKQGTHQAMDDIRESV 168 + ++VS L + G H A +D + Sbjct: 134 LVGIELPNERIEVSRLYYERKYGNAPPNTEVDLSFAAILHDLCIPPLGQHDAFNDALMTA 193 Query: 169 AELAYYRE 176 R+ Sbjct: 194 MMFLQLRD 201 >UniRef50_Q16B76 Exonuclease, putative n=3 Tax=Roseobacter RepID=Q16B76_ROSDO Length = 465 Score = 96.0 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 22/177 (12%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 + + D E TGLDP D ++++ + I E V+ + Sbjct: 269 RDLTFVVFDSETTGLDPHTDEVVQLGAVRVVNGKIIEGEVFDTLVNPGRTIPPGSTAVHQ 328 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 + + + A G A A +F + + I ++ D FL + + Sbjct: 329 -------ISDAMVADAPGFDVACRAFHQFAEH------AVIVAHNAPFDMAFLRRQCRDQ 375 Query: 124 EAYFHYRYLDVSTLKELAR---------RWKPEILDGFTKQGTHQAMDDIRESVAEL 171 + F LD L + + H + D + L Sbjct: 376 DYAFDNPILDTVHLSAVVFGGSAEHTLDALCDRLNVHIPDDVRHTGLGDALATAKAL 432 >UniRef50_Q2KXB5 Putative exonuclease n=4 Tax=Bordetella RepID=Q2KXB5_BORA1 Length = 193 Score = 96.0 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 61/173 (35%), Gaps = 27/173 (15%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 ++A + + DLE TGL I+E A + D I +E + V + + + Sbjct: 21 LTALGSAFVVADLETTGLSAHACEILEFAAVRVDTEGQIASE-YSQLVRINGRVPSFIA- 78 Query: 61 WNVRTHTASGLV-ERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 +G+ + V EA A +F+ G +P+ ++ D RFL Sbjct: 79 ------RLTGISQQEVIRDGKPIDEAFRAFCDFV------GTAPVFFHNASFDTRFLRAT 126 Query: 120 MPELEAYFHYRYLDVSTLKELARRWKPEILDG-----FTKQGT----HQAMDD 163 F D LARR PE+ G H+A+ D Sbjct: 127 ASRCGQAFDN---DTHCTLLLARRAWPELRSHKLGMLAEHLGAATPTHRALAD 176 >UniRef50_A7BDG4 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BDG4_9ACTO Length = 550 Score = 95.7 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 57/177 (32%), Gaps = 27/177 (15%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TGL D I EI + + ++ E + V S + + Sbjct: 29 WVVVDLETTGLGAGAD-ITEIGAVRIR-DGAVVDE-FSSLVKPSRPIPPFIT-------S 78 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ + A LE+ + N+ D FL + + Sbjct: 79 LTGITPAMVADAAPIASVLEHFLEWSGLGASDSPVLVAHNA-SFDVGFLRRAARACARPW 137 Query: 128 HY-RYLDVSTLKELARRWKPEILDGFTKQGT------------HQAMDDIRESVAEL 171 R +D L LA P L K GT H+A+ D R + L Sbjct: 138 PRVRIVDTLALARLA---LPRPLVRNHKLGTVASYFGTATVPEHRALGDARATAEIL 191 >UniRef50_A0PN08 DNA polymerase n=1 Tax=Mycobacterium ulcerans Agy99 RepID=A0PN08_MYCUA Length = 500 Score = 95.7 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 25/179 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 +D E TG E DR++E+ ++ A +I E + ++ + A H Sbjct: 98 FAVLDFETTGFAAEYDRVVEVGLVLLSAEGDIEDE-WSTLINPHRDVGA------TERH- 149 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 G+ R L L+ G+ + N + D+RFL + Sbjct: 150 --GIRARDVLGAPAFEAIIPRLLRDLR-----GRVFVAHN-VNFDQRFLLAELRRAGVPL 201 Query: 128 HYRYLDVSTLKELARRWKPEILDGFTK---------QGTHQAMDDIRESVAELAYYREH 177 +L A R P H+A+ D R + + L Y +H Sbjct: 202 DNPWLTGLCTMRWAGRLLPAASRKLPDCCDAAGVFLTDAHRALADARATASLLKYLIDH 260 >UniRef50_UPI0001C36AB7 DNA polymerase III, alpha subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36AB7 Length = 264 Score = 95.7 bits (237), Expect = 6e-19, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 61/173 (35%), Gaps = 26/173 (15%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 +S +N + DLE TG+ +D IIEI+ L + + E + V+ A Sbjct: 51 LSKYVDNYVVFDLETTGISAVKDDIIEISALKVKNHEQV--ETFSRLVNPRRPIPAGAT- 107 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 +G+ + + S G L+F+ G+ I N D FL + Sbjct: 108 ------KVNGITDEMVQSEPGLEFILPEFLDFI-----DGEILIGHNIQSFDLLFLNRAA 156 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDD 163 E+ D +AR P + + +G H+A +D Sbjct: 157 DEVCRKA--VLNDFIDTLFMARALLPGLSRHRLTDLADYFKISSEGAHRAFND 207 >UniRef50_B4U7J6 DNA polymerase III, epsilon subunit n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U7J6_HYDS0 Length = 196 Score = 95.3 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 29/188 (15%) Query: 2 SANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDW 61 S + + +D+E TGL+P+ IIEI + + + + ++ + + Sbjct: 6 SFENDIYVVLDIETTGLNPDEHEIIEIFAFLVEKER--ITKQFHRLINPGFFIPRRITE- 62 Query: 62 NVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFK-YM 120 +G+ + F+K ++ I G+++ D FL K Y Sbjct: 63 ------ITGITNAMLVGQPKVEGIIYDFDNFVKDYI------IVGHNVKFDLSFLSKAYS 110 Query: 121 PELEAYFHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVAE 170 L + + EL+++ P + + H+A DD + Sbjct: 111 IYLHKKLNSPNI---CTLELSKKLIPNLKSYKLSAVADYFNIKYERLHRAKDDALLTYNI 167 Query: 171 LAYYREHF 178 + Sbjct: 168 FNKLMDII 175 >UniRef50_B4S124 DNA polymerase III, epsilon subunit n=3 Tax=Proteobacteria RepID=B4S124_ALTMD Length = 715 Score = 95.3 bits (236), Expect = 8e-19, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 56/177 (31%), Gaps = 26/177 (14%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 + +D+E TG + +RI EI + + + ++ + + Sbjct: 541 QPYVVVDIETTGGNNSYNRITEIGMVKLVGGKEV--DRFQTLLNPQRRIPSSIT------ 592 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 +G+ + + A E F + + +++ D F+ + LE Sbjct: 593 -RLTGISDDMVADAPLFAEVADHIASFTE------DAVFVAHNVNFDYGFIKQEFARLEQ 645 Query: 126 YFHYRYLDVSTLKELARRW---------KPEILDGFTKQGTHQAMDDIRESVAELAY 173 F + T++E+ R + H+A+ D + + L Sbjct: 646 SFRRPKM--CTVREMRRTHPGLSSYSLANLTKHFHIDMEQHHRALSDAKAAAELLKL 700 >UniRef50_Q73L66 DNA polymerase III domain protein n=2 Tax=Treponema RepID=Q73L66_TREDE Length = 217 Score = 95.3 bits (236), Expect = 9e-19, Method: Composition-based stats. Identities = 25/180 (13%), Positives = 50/180 (27%), Gaps = 23/180 (12%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 D E TG + + +R++EI + D + + + + N Sbjct: 16 FTAFDTETTGTEAKAERVVEIGCVKFD--IRGVIARYNVLIDPEKPMPPEAGKVNQ---- 69 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY- 126 + + + A E L+F++ + + ++ D F+ + Sbjct: 70 ---ITDEMLAGQPKFAEVLPDFLDFIR------NTVLVAHNASFDINFINCELERCGKTK 120 Query: 127 FHYRYLDVSTLKE-------LARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFI 179 + D T G H+A DD R + HF Sbjct: 121 LTNKVFDTLTFARETLPGLQSYALQNLATQFGVQAVNAHRAEDDARVCMEFFKIAVSHFF 180 >UniRef50_Q3SKJ9 DNA polymerase III, epsilon subunit n=4 Tax=Proteobacteria RepID=Q3SKJ9_THIDA Length = 470 Score = 94.9 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 51/171 (29%), Gaps = 30/171 (17%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 L ++DLE TG + RDR+ EI E + V+ Sbjct: 7 PQRLAFVDLETTGANAARDRVTEI---GVVVVDGDRVETWSTLVNPERAIP-------QF 56 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 +G+ + A E L G+ I N+ D FL L Sbjct: 57 IQQLTGISNEMVADAPTFARVADELAERL-----DGRLFIAHNA-RFDYGFLKHEYQRLG 110 Query: 125 AYFHYRYLDVSTLKELARRWKPEILDG-----------FTKQGTHQAMDDI 164 F DV L+RR PE T+ H+A+ D Sbjct: 111 RRFR---ADVLCTVRLSRRLFPEHYRHNLDSLIARHGLATEGDRHRALADA 158 >UniRef50_C1QET6 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QET6_9SPIR Length = 252 Score = 94.9 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 26/169 (15%) Query: 5 ENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVR 64 N ID+E TGL P D+IIEI + N I + + V +D Sbjct: 58 PANYTIIDVETTGLKPREDKIIEIGAIKYRDNKEI--DYFSTLVK--------VDYIPNF 107 Query: 65 THTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE 124 + + + ++ + EA +F+ G + G ++ D +FL+ + E+ Sbjct: 108 ISSYTNITNKMVKNAPRVDEAIKQFYDFV------GDDILVGYNVPFDIKFLYDALYEVS 161 Query: 125 A---YFHYRYLDVSTL-------KELARRWKPEILDGFTKQGTHQAMDD 163 + ++DV + E ++ + H+AM D Sbjct: 162 NGELLLNNDFIDVMYIAKRVLKDLENYKQVTVASYYNISIDNLHRAMGD 210 >UniRef50_B1C737 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C737_9FIRM Length = 204 Score = 94.9 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 28/189 (14%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 M + ID+E TGL+P+ + IIE+ + + I+ E + V + ++ Sbjct: 17 MFDFPEDYTVIDIETTGLNPDENEIIEVGAVKVR-DRKIVDE-FSSFVSPKKDIISP--- 71 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYM 120 +G+ E + + EF+ + G+++ D FL+ Sbjct: 72 ---EIRKLTGIDEAMIEGADQIEDVIPRFNEFI------DGEILLGHNVNFDINFLYDNY 122 Query: 121 PELEA-YFHYRYLDVSTLKELARRWKPEILD----------GFTKQGTHQAMDDIRESVA 169 Y Y+D L +++R+ PE + G H+A+ D ++ Sbjct: 123 ERYSDFYLSNDYVD---LLKISRKLSPEFENHKLETVLKKLGIKVDQQHRAVSDCIDAHH 179 Query: 170 ELAYYREHF 178 YRE Sbjct: 180 CFEKYRETI 188 >UniRef50_A0QF17 DNA polymerase III, epsilon subunit n=7 Tax=Actinomycetales RepID=A0QF17_MYCA1 Length = 643 Score = 94.9 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 62/196 (31%), Gaps = 32/196 (16%) Query: 1 MSANENNLIWIDLEMTGL------DPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQ 54 ++ + + +DLE TG + D I EI + + +L E V Sbjct: 33 VALRDTTFVVVDLETTGGRSTSTGETAPDAITEIGAVKVR-DGVVLGE-FATLVDPQRSI 90 Query: 55 LALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRR 114 + +G+ + + LEF + G + N+ G D Sbjct: 91 PPQIM-------RLTGITTAMVSDAPAIDAVLPMFLEF--AGLDRGAVLVAHNA-GFDVG 140 Query: 115 FLFKYMPELEAYFHYRYLDVSTLKELARRWK------------PEILDGFTKQGTHQAMD 162 FL + + + V LARR L T Q TH+A+D Sbjct: 141 FLRAAAQQCDIAWPRPR--VLCTVRLARRVLSREEAPSVRLASLARLFAVTTQPTHRALD 198 Query: 163 DIRESVAELAYYREHF 178 D R +V L E Sbjct: 199 DARATVDVLHALIERV 214 >UniRef50_A5B9I7 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5B9I7_VITVI Length = 1027 Score = 94.9 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 118 KYMPELEAYFHYRYLDVSTLKELARRWKP-EILDGFTKQGTHQAMDDIRESVAELAYYRE 176 KYMP+L + F + +DVS++K L RW P + +K+ H+AMDDIRES+ EL YYRE Sbjct: 958 KYMPDLASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAMDDIRESIRELKYYRE 1017 Query: 177 HFIK 180 + K Sbjct: 1018 NIFK 1021 >UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Betaproteobacteria RepID=Q21VB4_RHOFD Length = 476 Score = 94.9 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 28/179 (15%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + +DLE TG +P DRI EIA + + + + V+ + H Sbjct: 5 YVLLDLETTGGNPVHDRITEIAAVRIENGQEV--ARWSTLVNPGCSISPFI------QH- 55 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 +G+ + G L L + + +++ D FL + L+ Sbjct: 56 LTGISNAMVRGAPGFETVAQHLLALL------DGAVLVAHNVRFDHGFLLNELARLDVAL 109 Query: 128 HYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVAELAYYRE 176 + L+R P+ G H+AM D+ A L R+ Sbjct: 110 R---VKTLCTVRLSRLLYPQHKGHGLDAIMQRHGIRTLERHRAMGDVEVMQAWLQIARQ 165 >UniRef50_A6LV05 Exonuclease, RNase T and DNA polymerase III n=6 Tax=Clostridium RepID=A6LV05_CLOB8 Length = 976 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 30/183 (16%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 +N+I++D+E TGLD IIEI + N + + + Sbjct: 10 DNVIYLDIETTGLDETCSEIIEIGAVKV---KNGVITTYNTLIRPRGRVPISIYSLC--- 63 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEA 125 S L E S + LEFL+ P+ ++ +R+FL Y+PE++ Sbjct: 64 ---SDLKEADLLSARSLNSIKQEVLEFLE------DLPLICHNGNFERKFLSFYIPEIK- 113 Query: 126 YFHYRYLDVSTLKELARRWKPEI--------LDGFTKQGTHQAMDDIRESVAELAYYREH 177 +D L + W+ E + K H+ + D S+ L Sbjct: 114 ---NTIMDSMELAIILEPWRKEYNLNSLIKEITNLNKDELHRGLSD---SIDTLKVVNSL 167 Query: 178 FIK 180 ++ Sbjct: 168 LLR 170 >UniRef50_Q3AAH9 Putative DNA polymerase III, epsilon subunit n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AAH9_CARHZ Length = 222 Score = 94.5 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 56/164 (34%), Gaps = 23/164 (14%) Query: 10 WIDLEMTGLDP-ERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 IDLE TGL P + D II I + N NI V+ E Sbjct: 40 VIDLETTGLKPFQGDEIIAIGAVKI-INGNITRPAFHAYVNPQREIPE-------VVQRL 91 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL-EAYF 127 +G+ + + L+F + S I G+S+ D FL K++ L Sbjct: 92 TGISPKTVQNAPPLTNTLTTLLDFAR------NSVIVGHSVNFDLAFLNKHLSSLTGKKL 145 Query: 128 HYRYLDVSTL--KELARRWKPEILDGFTK-----QGTHQAMDDI 164 R LD L R + + K QG H A+ D Sbjct: 146 TPRLLDTVDLGIYLFPREPNYSLENFAQKFAISLQGRHTALGDA 189 >UniRef50_B7A7U0 Putative PAS/PAC sensor protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A7U0_THEAQ Length = 627 Score = 94.1 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 46/169 (27%), Gaps = 25/169 (14%) Query: 10 WIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTAS 69 DLE TGLDP D II + + + + E V + Sbjct: 445 AFDLETTGLDPREDAIIALGAVHLLGSRVLRHEVYEALVDPGRPIPKASTEV-------H 497 Query: 70 GLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHY 129 GL + E A FL+ G + N D FL K Sbjct: 498 GLTWEMLKDKPKLEEVLPAFRAFLE-----GSVLVAHNG-AFDMAFLRK-----VGIDQP 546 Query: 130 RYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIRESVAEL 171 +D L L R + G G H A+ D + Sbjct: 547 PLVDTLLLAHLLFPDLKDHRLERLAERFGVPVLGRHTALGDALMTAEVY 595 >UniRef50_C6CUG6 DnaQ family exonuclease/DinG family helicase n=4 Tax=Paenibacillus RepID=C6CUG6_PAESJ Length = 953 Score = 94.1 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 29/176 (16%) Query: 7 NLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 +DLE TG D I+++ V D NL I+ E + V + E A + Sbjct: 2 KFAVLDLETTG-HSVSDDILQVGLAVLDDNLEIV-ETYSSFVRPTIEIPAFITQ------ 53 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 +G+ + A E + + +L+ + + +++ D FL + + + Sbjct: 54 -LTGIDADMVADAPELDEVLMQLIPYLE------DAVLVAHNVNFDAGFLNQALDRCGYH 106 Query: 127 -FHYRYLDVSTLKELARRWKPEI----------LDGFTKQGTHQAMDDIRESVAEL 171 F R LD EL R P I L G H+A D + Sbjct: 107 PFIGRRLDT---IELLRILYPSITTYQLGAVTELFGIAHDQHHRADSDAIATAELF 159 >UniRef50_D0MIT4 Putative sensor with HAMP domain n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIT4_RHOM4 Length = 616 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 50/168 (29%), Gaps = 21/168 (12%) Query: 10 WIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 D E TGL PE+ D II I + E V+ VR H Sbjct: 424 VFDTETTGLHPEQGDEIIAIGAVRIVGGRIRPEETFDQLVNPRRPISLDS----VRVH-- 477 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFH 128 G+ + E F + + + G+++ D +F+ + L F Sbjct: 478 -GIQPVLLQDKPPIEEVLPRFYRFAR------DTVLVGHNVAFDLKFIRQKEKALGLRFD 530 Query: 129 YRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIRESVA 169 LD L + + G G H A+ D + Sbjct: 531 QPVLDTMLLAAVVDPERQHYGLDELAAAFGIEPVGRHSALGDALITAE 578 >UniRef50_C0ECE2 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECE2_9CLOT Length = 865 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 29/184 (15%) Query: 6 NNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRT 65 N++ D+E TG D D II+IA + D +L +H S Sbjct: 497 KNVVVFDVESTGTDTSSDEIIQIAAVRIDETGRVL-RSFEQLLHPSKPV----GQSEAVH 551 Query: 66 HTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE- 124 H + L+ + F++ + + G+++G D L + L Sbjct: 552 HFSDALLAE---RGGEPPQVLAEFCSFVR------GAVVVGHNVGFDLTILASELSRLGL 602 Query: 125 AYFHY-RYLDVSTLKELARRWKPEI----LDGFTK------QGTHQAMDDIRESVAELAY 173 Y Y D L ARR+ P++ L+ +K + +H AMDDI + L + Sbjct: 603 PPAEYEEYYDTLDL---ARRFYPDLPNHKLETLSKLLDTEVKSSHDAMDDILATKDVLLH 659 Query: 174 YREH 177 H Sbjct: 660 LTAH 663 >UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E98F Length = 488 Score = 93.7 bits (232), Expect = 3e-18, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 64/195 (32%), Gaps = 36/195 (18%) Query: 1 MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD 60 MS + ++ D E G+ P+ D + A + TD NL E I + L Sbjct: 1 MSQPPASFLFHDYETWGISPQHDYPCQFAAIRTDENLQQCDEPINITAKIHLDYLPHPQA 60 Query: 61 WNVRTHTASGLVERVKASTMGDREAELATLEFLKQ-WVPAGKSPICGNSIGQDR-----R 114 V +G+ ++ T+ + E E ++ + Q + + NSI D Sbjct: 61 VLV-----TGITPQM---TLAEGEYEYTFMQKIHQAMIQPNTCVVGYNSIKFDDEVSRFS 112 Query: 115 FLFKYM-PELEAYFH-YRYLDVSTLKELARRWKPEILDGF-------------------- 152 F +M P Y H D+ L +PE + Sbjct: 113 FFRNFMDPYQREYLHGNSRWDLINLVRACYALRPEGIKWPLGDNGLVSFKLERLTQENGI 172 Query: 153 TKQGTHQAMDDIRES 167 + H A+ D+ + Sbjct: 173 SHTNAHDALSDVHAT 187 >UniRef50_C2KW36 Possible DNA-directed DNA polymerase III alpha subunit (Fragment) n=1 Tax=Oribacterium sinus F0268 RepID=C2KW36_9FIRM Length = 821 Score = 93.4 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 52/170 (30%), Gaps = 22/170 (12%) Query: 9 IWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTA 68 + DLE TG DP + IIEI + + + + + V+ + Sbjct: 519 VVFDLETTGFDPRVNHIIEIGAVKIENGK--IIDRMDVFVNPGVPIPFRITQ-------L 569 Query: 69 SGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFH 128 + + + + G E L+F K + + ++ D F+ L F Sbjct: 570 TSIDDSMVMDAKGIEEVLPQFLDFAK------DAILVAHNADFDYHFVSTKAKALNIPFS 623 Query: 129 YRYLDVSTLKEL-------ARRWKPEILDGFTKQGTHQAMDDIRESVAEL 171 +D L L + H+A+DD + Sbjct: 624 APVIDTVALSRLLLPRLNRFKLDTVAKELKIELLHHHRAVDDAEATARIY 673 >UniRef50_O83649 DNA polymerase III subunit epsilon n=2 Tax=Treponema pallidum RepID=DPO3E_TREPA Length = 215 Score = 93.4 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 52/168 (30%), Gaps = 25/168 (14%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 D E TGL E DRIIEI + D + + + + Sbjct: 15 FTAFDTETTGLKAEEDRIIEIGAVTFDRKG--IIARFSTLIFPDRAIPPDVS-------K 65 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY- 126 + + + + + E F+K G + N+ D FL + + Sbjct: 66 INHITDDMLVNKPRFCEIVSDFSRFIK-----GTVLVAHNA-NFDVEFLNAELSLCKKQP 119 Query: 127 FHYRYLDVSTLKEL---------ARRWKPEILDGFTKQGTHQAMDDIR 165 ++ +D + + R + G T H+A DD R Sbjct: 120 LSHKVVDTYAMAQAVFPGLGRHQYRLQNLALQFGLTVHAAHRAEDDAR 167 >UniRef50_Q83YZ1 DNA polymerase III alpha subunit n=1 Tax=Peanut witches'-broom phytoplasma RepID=Q83YZ1_PEWBP Length = 1492 Score = 93.4 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 26/178 (14%) Query: 4 NENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNV 63 +N + +D+E TG RDRII IA + + E ++ + + + Sbjct: 401 KNHNYVVLDIETTGFSKTRDRIISIAAVKI--QNGKIIEYFDELINPGKDI--KISNLIQ 456 Query: 64 RTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL 123 R + + + + + +E L+F++ + ++ D FL + + Sbjct: 457 R---LTNISDEILLNKPHIKEILSKFLDFIRD---CPNCVLVAHNASFDIEFLQETFKNI 510 Query: 124 EAYFHYRYLDVSTLKELARRWKPEILDGFTKQGT--------------HQAMDDIRES 167 ++ L V LA+++ +IL F+ + H A+ D R + Sbjct: 511 G--LYWPLLPVIDTLTLAQKYFNKILKYFSLEKIVKSFKIKLDSEGQYHNALFDARAT 566 >UniRef50_O68045 DNA polymerase III subunit epsilon-like protein n=6 Tax=Rhodobacteraceae RepID=DPO3E_RHOCA Length = 704 Score = 93.4 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 31/176 (17%) Query: 8 LIWIDLEMTGLDPER-DRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTH 66 + D E TGL P D I++IA + + E V+ A Sbjct: 510 FVVFDTETTGLFPTGGDEIVQIAAVRIVNGRRVAGEVFDTLVNPGRPIPAASTAV----- 564 Query: 67 TASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAY 126 G+ E + A+ E +F + + + ++ D FL + + Sbjct: 565 --HGITEAMVATAPAIAEVGRRFHKFAE------GAVLVAHNAPFDLEFLRRKELLIGKN 616 Query: 127 FHYRYLDVS-------------TLKELARRWKPEILDGFTKQGTHQAMDDIRESVA 169 F LD +L L R ++ H A+ D + Sbjct: 617 FDNPVLDTVLLSAVVFGAAEGHSLDALTHRLGI----TIPEEARHTALGDTVATAE 668 >UniRef50_A9BFB1 DNA polymerase III, epsilon subunit n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BFB1_PETMO Length = 187 Score = 93.0 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 21/186 (11%) Query: 1 MSANENNLIWIDLEMTGLDPE-RDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMD 59 M + + +D E TGL+PE DRIIEIA + V+ + + Sbjct: 1 MKVKDKVFLALDFETTGLNPELGDRIIEIAAIPIYDKKINFKYAFHTLVNPNIFIPGEVS 60 Query: 60 DWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKY 119 + H + + ++ E E++ S I +++ D RFL Sbjct: 61 KF----HKLN---NQDISNAPSLSEVFPRFKEYI------DDSIIVSHNVKMDLRFLDIA 107 Query: 120 MPELEAY-FHYRYLDVSTLKELARRWKPEILDGFTKQGT------HQAMDDIRESVAELA 172 E + Y+D + + P L+ +K+ H+A DD + Sbjct: 108 AKESGMFSIDNYYIDTLEISKYYFDKGPYNLEFLSKKFNLGIKQFHRAWDDALSTAKLFQ 167 Query: 173 YYREHF 178 Y + F Sbjct: 168 KYIKLF 173 >UniRef50_A3X8N6 Exonuclease, DNA polymerase III, epsilon subunit family protein n=11 Tax=Rhodobacteraceae RepID=A3X8N6_9RHOB Length = 484 Score = 93.0 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 48/173 (27%), Gaps = 30/173 (17%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 D E TGL P +D I++I + I E V R H Sbjct: 277 FAVFDTETTGLLPHKDDIVQIGAVRVLNGRLIEGEELNTLVDPGRPIPEAS----TRVH- 331 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127 G+ + EA + A + I ++ D FL ++ + Sbjct: 332 --GVSTAMVQGAPDIAEAAAEF------HLFATDAVIVAHNAPFDMAFLRRHAKASGLAW 383 Query: 128 HYRYLDVS-------------TLKELARRWKPEILDGFTKQGTHQAMDDIRES 167 + LD TL L R H A+ D + + Sbjct: 384 DHPILDTVLLSAVLFGASVPHTLDALCERLDI----TIPPALRHTALGDAQAT 432 >UniRef50_C1SK59 Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SK59_9BACT Length = 228 Score = 93.0 bits (230), Expect = 4e-18, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 55/173 (31%), Gaps = 24/173 (13%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 ID E TGLD RII +A + N I+ ++ E W H Sbjct: 45 FSVIDTETTGLDLNDARIINVAAVKV-QNFKIID-FYNSFINPETEIPKESIQW----HN 98 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPEL---- 123 + + + A E L F+ S I G+ + D + + K M + Sbjct: 99 ---ITDEMVADKPTAGEVLPDFLNFV------DDSIIVGHHVTFDIKMINKEMMDSFSCQ 149 Query: 124 --EAYFHYRYLDVSTLKELARRWKPEI---LDGFTKQGTHQAMDDIRESVAEL 171 + + + + R+ + L T G H A+ D + Sbjct: 150 INNNWLDTMLIYSHAIIKKDERYSLDYLLDLYNVTCNGRHTALGDALATAEVF 202 >UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma RepID=DPO3_UREPA Length = 1442 Score = 92.6 bits (229), Expect = 5e-18, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 56/181 (30%), Gaps = 22/181 (12%) Query: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67 + D+E TGL P D IIE ++ N + E + + + + Sbjct: 409 YVIFDIETTGLFPNFDEIIEFGAVIM-QNNKQIGEKIQFFIKPIQQINENVTN------- 460 Query: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELE-AY 126 + + + + + + ++ A L E + + N I D F+ + + + Sbjct: 461 LTNISQEMVNNAIDEKTALLKIKEIFDDHI-----LVAHNGINFDINFINQRLLKWGLEP 515 Query: 127 FHYRYLDVSTLKELARRWKPEILDGFTKQ--------GTHQAMDDIRESVAELAYYREHF 178 +D + +K L K+ H+A D + + Sbjct: 516 LKNPSIDTLMISRAINPFKSHRLGAICKKYEVDYNDESAHRADYDAIVLADVFKVMKNNL 575 Query: 179 I 179 Sbjct: 576 F 576 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.158 0.493 Lambda K H 0.267 0.0484 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,381,477,888 Number of Sequences: 3077464 Number of extensions: 62496054 Number of successful extensions: 158854 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 786 Number of HSP's successfully gapped in prelim test: 945 Number of HSP's that attempted gapping in prelim test: 155490 Number of HSP's gapped (non-prelim): 1852 length of query: 181 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 60 effective length of database: 668,023,212 effective search space: 40081392720 effective search space used: 40081392720 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 89 (38.7 bits)