52 d2paja2 Probab=99.18   E-value=1.7e-08  Score=67.96  Aligned_columns=242  Identities=9%

Q ss_pred             CEEEEEC--------------CCCHHHHCCHHHHHHHHHHCCCCEEEEECCCH-------HHHHHHHHHHHHCCCCEEEC
Q ss_conf             9769714--------------78555511389999999977998999907998-------88999999997317940532
Q batch____         1 MFDIGVN--------------LTSSQFAKDRDDVVACAFDAGVNGLLITGTNL-------RESQQAQKLARQYSSCWSTA   59 (260)
Q Consensus         1 iID~H~H--------------l~~~~~~~~~~~~l~~~~~~GV~~~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~   59 (260)
                      |||+|+|              ++...........++++-++||+.++.++...       ....................
T Consensus         3 lID~H~H~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (282)
T d2paja2           3 WVNTHHHLFQSLLKGEPFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLR   82 (282)
T ss_dssp             EECCCCCGGGGGCCSCCCGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEECCCCHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf             15021001002458820232189999999999999999982997998367777651017999999986543026378620


Q ss_pred             CCCCCCCCCCC------------HHHHHHHHHHHCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             34568755699------------899999998710480766220102236776896761699999999999739669981
Q batch____        60 GVHPHDSSQWQ------------AATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMH  127 (260)
Q Consensus        60 ~~~~~~~~~~~------------~~~~~~l~~~~~~~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH  127 (260)
                      ...........            ...................+...................+..+++.|.+.|+++.+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~H  162 (282)
T d2paja2          83 GGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHSH  162 (282)
T ss_dssp             CCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             44577766554654334423489999999998887432023320000002577544489899999999999769982741


Q ss_pred             CCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf             57986899999998278997899988899999999998489848623545677584899999970697639992288765
Q batch____       128 CRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYL  207 (260)
Q Consensus       128 ~~~~~~~~~~~l~~~~p~~~~v~~H~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dril~gSD~p~~  207 (260)
                      .....+........ ......+..|+............+.+.++.+.+........+.+.+.    |. ++.+|||.|  
T Consensus       163 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~~~~~~----G~-~v~~gtD~~--  234 (282)
T d2paja2         163 LSGKSPVAFCGEHD-WLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRLPVREMADA----GV-PVSIGVDGA--  234 (282)
T ss_dssp             CCCCCHHHHHHHTT-CCSTTEEEESCCSCCHHHHHHHHHHTCEEEECHHHHHCCCCTTHHHH----TC-CEEECCCHH--
T ss_pred             CCCCCHHHHHHHCC-CCCCCEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHHCCHHHHHHC----CC-EEEEEECCC--
T ss_conf             57778667677548-74357376313207899999998619959985003230598999958----98-199984578--


Q ss_pred             CCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             630000012356776478999999999860999899999999989998474
Q batch____       208 LPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGI  258 (260)
Q Consensus       208 ~~~~~~~~~~~~~~~p~~i~~~~~~~~~~~gls~e~~~~i~~~Na~rlfgL  258 (260)
                              .......+.........+....|+|.+++-++...|++|.+||
T Consensus       235 --------~~~~~~~~~~~~~~~~~~~~~~g~~~~eal~~aT~n~A~~lgl  277 (282)
T d2paja2         235 --------ASNEAADMISEVHMTWLAQRARLASIAEVIHWGTAGGARVMGL  277 (282)
T ss_dssp             --------HHCSCCSHHHHHHHHHHHHHHTCCCHHHHHHHHTHHHHHHHTC
T ss_pred             --------CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             --------7777889899999999999852999899999971227987386