20 c3cjpA_ Probab=99.97   E-value=1.6e-29  Score=188.71  Aligned_columns=220  Identities=16%

Q ss_pred             CEEEEECCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCH----------------------------------HHHHHHH
Q ss_conf             976971478555511389999999977998999907998----------------------------------8899999
Q batch____         1 MFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNL----------------------------------RESQQAQ   46 (260)
Q Consensus         1 iID~H~Hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~~~----------------------------------~~~~~~~   46 (260)
                      |||+|+|++++     .++.++.|++.||++.++.+...                                  ..++.+.
T Consensus         2 IID~H~Hl~~~-----~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (262)
T c3cjpA_           2 IIDGHTHVILP-----VEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKELT   76 (262)
T ss_dssp             CEEEEEECCSS-----HHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHHH
T ss_pred             EEEEEEECCCC-----HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCCCCCCHHHHHHHH
T ss_conf             68998502697-----8999999997699569983587885783108999984222035516630653222136789999


Q ss_pred             HHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             99973179405323456875569989999999871048076622010223677689676169999999999973966998
Q batch____        47 KLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFM  126 (260)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~i  126 (260)
                      +.++.+++++.+....+....  .....++........     |..|++.+.....   +++.+.++++.|.+.+.++.+
T Consensus        77 ~~~~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----g~~gi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  146 (262)
T c3cjpA_          77 NVIQAYPSRYVGFGNVPVGLS--ENDTNSYIEENIVNN-----KLVGIGELTPASG---QIKSLKPIFKYSMDSGSLPIW  146 (262)
T ss_dssp             HHHHHSTTTEEEEECCCTTCC--HHHHHHHHHHHTTTT-----TCSEEEEECCCTT---CGGGGHHHHHHHHHTTCCCEE
T ss_pred             HHHHHHCCCCCCCEEECCCCC--CHHHHHHHHHHHCCC-----CEEEEEECCCCCC---CCHHHHHHHHHHHHCCCCEEE
T ss_conf             997630275002202125788--068999999971248-----7508984588767---885389999999964995599


Q ss_pred             ECCCC-----HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH--CCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf             15798-----68999999982789978999888999999999984--898486235456775848999999706976399
Q batch____       127 HCRDA-----HERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVA--HGIYIGITGWVCDERRGLELRELLPLIPAEKLL  199 (260)
Q Consensus       127 H~~~~-----~~~~~~~l~~~~p~~~~v~~H~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dril  199 (260)
                      |+...     .++.++.+.+.+|++++|+.|+++++.....+.+.  +|+|++++....     ..++++++.+|.||+|
T Consensus       147 ~h~~~~~~~~~~~~~~~~~~~~P~~~~i~~H~g~~~~~~~~~~l~~~~n~y~d~s~~~~-----~~~~~~~~~~g~dril  221 (262)
T c3cjpA_         147 IHAFNPLVLQDIKEIAELCKAFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFS-----TFVLKIVINELPLKCI  221 (262)
T ss_dssp             ECCSTTCCHHHHHHHHHHHHHSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSC-----HHHHHHHHHHSTTTEE
T ss_pred             EECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCH-----HHHHHHHHHHCCCEEE
T ss_conf             92688777589899999999689985899628877889999999604556170122688-----9999999850923199


Q ss_pred             EECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             92288765630000012356776478999999999860999899999999989998474
Q batch____       200 IETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGI  258 (260)
Q Consensus       200 ~gSD~p~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~~~gls~e~~~~i~~~Na~rlfgL  258 (260)
                      ||||+|+..+...                 .+.+.++ ++|++++++|+++||+|+|||
T Consensus       222 ~GSD~P~~~~~~~-----------------~~~~~~~-~l~~~~~~~i~~~Na~rl~~l  262 (262)
T c3cjpA_         222 FGTDMPFGDLQLS-----------------IEAIKKM-SNDSYVANAVLGDNISRLLNI  262 (262)
T ss_dssp             CCCCTTSSCHHHH-----------------HHHHHHH-CSSHHHHHHHHTHHHHHHHTC
T ss_pred             EECCCCCCCHHHH-----------------HHHHHHC-CCCHHHHHHHHHHHHHHHHCC
T ss_conf             9038689998999-----------------9999947-989899999971339999585