3 c1pmdA_ Probab=100.00  E-value=0  Score=818.49  Aligned_columns=500  Identities=23%

Q ss_pred             CCEEECCCCCEEEEEEEEEEEEEEHHHCCCCCC--------CCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC--CEEEE
Q ss_conf             975784488270465878999997314276410--------15799999999884899999999987167777--17975
Q batch____        71 RGMITDRSGRPLAVSVPVKAIWADPKEVHDAGG--------ISVGDRWKALANALNIPLDQLSARINANPKGR--FIYLA  140 (588)
Q Consensus        71 RG~I~DrnG~~La~~~~~~~i~~~p~~i~~~~~--------~~~~~~~~~L~~~l~~~~~~l~~~l~~~~~~~--~~~l~  140 (588)
                      ||+||||||++||.|.+.|+|+++|..+.+...        ....+.++.|+.+|+++.+++.+++.....+.  |.++.
T Consensus         1 RG~I~DrnG~~LA~s~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~La~~l~~~~~~~~~~l~~~~~~~~~~~~~~   80 (675)
T c1pmdA_           1 RGTIYDRNGVPIAEDATSYNVYAVIDENYKSATGKILYVEKTQFNKVAEVFHKYLDMEESYVREQLSQPNLKQVSFGAKG   80 (675)
T ss_dssp             CCCEECTTSCEEEBCCCEEEECCCBCSSCCCTTTCCSSCCSTTTHHHHHHHTTTTCCCHHHHHHHHSSCCSBCCCCCSSS
T ss_pred             CCEEECCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCC
T ss_conf             97357648848466577899999821003321112122322598999999998838998999999972366314410111


Q ss_pred             CCCCHHH----HHHHHHCCCCCEEEEEEEEEECCCCCCHHHHCCCCCCCCC--------HHHHHHHHHHHHHCCCCCEEE
Q ss_conf             0799999----9999855999558887326756785302543121166762--------176799898778389996699
Q batch____       141 RQVNPDM----ADYIKKLKLPGIHLREESRRYYPSGEVTAHLIGFTNVDSQ--------GIEGVEKSFDKWLTGQPGERI  208 (588)
Q Consensus       141 ~~i~~~~----~~~i~~~~~~Gi~~~~~~~R~Yp~~~~a~~vlGyv~~~~~--------G~~GlE~~yd~~L~G~~G~~~  208 (588)
                      ++++.+.    .+.+++++++||.+++.++|+||++++++|+|||++.+..        |++|||++||++|+|++|+..
T Consensus        81 ~~i~~~~~~~~~~~~~~~~l~gi~~~~~~~R~YP~~~~a~~viG~v~~~~~~~~~~~~vG~~GlE~~yd~~L~G~~G~~~  160 (675)
T c1pmdA_          81 NGITYANMMSIKKELEAAEVKGIDFTTSPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGMESSLNSILAGTDGIIT  160 (675)
T ss_dssp             SSBCTTTTTTHHHHSSTTSCCCCCEEEECCCBCSSSSSSTTTSCCCCBCCCSSSSCCBCCTTSGGGSTTSSCCCCSTTTT
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             38899999998765885699806874365010787201466613336211121001523478899998788289986489


Q ss_pred             EEECCCCCCC--CCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCC
Q ss_conf             9987998784--34443277789728980188999999999998852058654799999789980999986788783113
Q batch____       209 VRKDRYGRVI--EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNL  286 (588)
Q Consensus       209 ~~~d~~g~~i--~~~~~~~~~~G~~I~lTID~~lQ~~~e~~l~~~~~~~~~~~ga~Vvmd~~TG~IlA~as~p~~dpn~~  286 (588)
                      +++|..|+.+  .......|++|++|+||||.++|+++|++|++.++..++++|++|||||+||+||||+|+|+||||.+
T Consensus       161 ~~~d~~g~~i~~~~~~~~~~~~G~~I~lTiD~~iQ~~~e~~l~~~~~~~~~~~~~~vvmd~~TGeIlAma~~p~ydpn~~  240 (675)
T c1pmdA_         161 YEKDRLGNIVPGTEQVSQRTMDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTK  240 (675)
T ss_dssp             TTTTSTTCCCSCCCTTCCCCCCCCEEECSCCHHHHHHHHHHHHHHHHHSCEEEEEEEEECSSSCBEEEEECSSCCCTTTT
T ss_pred             EEECCCCCEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCCCCCCCC
T ss_conf             99858987820433221046688517983579998899999998863136431699999779981999972777772001


Q ss_pred             CCCCCC-CCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEECCCEEECCEEEEECC------CCCCCCHHHHHHHH
Q ss_conf             468532-11210111557876417899999999888998322872498787886264658------88611389998870
Q batch____       287 SGTPKE-AMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPYRINGHEIKDVA------RYSELTLTGVLQKS  359 (588)
Q Consensus       287 ~~~~~~-~~~nra~~~~y~PGStfK~~t~aaaLe~g~~~~~t~~~~~~~~~~g~~~~~~~------~~g~~tl~~al~~S  359 (588)
                      ...... .+.|+++++.|+|||||||||+++|||+|+++++++|+|+++.++++.++||.      +||.+++++||++|
T Consensus       241 ~~~~~~~~~~n~a~~~~~~PGStfK~~t~aaaLe~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~it~~~al~~S  320 (675)
T c1pmdA_         241 EGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRDWDVNEGLTGGRMMTFSQGFAHS  320 (675)
T ss_dssp             CSSSSCCCCCCTTTSCEECCCSTTHHHHHHHHHHHTCCCSSCCEECSCCCTTTSCCCCGGGGTCCSSCCEECSHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEECCCCEEECCEEEEECCCCCCCCCCEEEEHHHHHHHC
T ss_conf             57775210122100266787530389999999985899845486268879998200215664788750256798988852


Q ss_pred             CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf             58999999997098999999998489986789887655786488445481224445427652317999999999975188
Q batch____       360 SNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYG  439 (588)
Q Consensus       360 ~N~~f~~l~~~lg~~~~~~~~~~~G~g~~tgidlp~e~~g~~~~~~~~~~~~~~~~~iGqg~~vTPlqla~~~a~iAN~G  439 (588)
                      ||++|+++++++|++++++++++|||+++|++|||+|..|.++   .|+..++++++||||+.+||||||++|++|||+|
T Consensus       321 ~N~~~~~l~~~lg~~~~~~~~~~~G~~~~tgidl~~e~~g~~~---~~~~~~~a~~s~Gqg~~vTplqla~ayatiAN~G  397 (675)
T c1pmdA_         321 SNVGMTLLEQKMGDATWLDYLNRFKFGVPTRFGLTDEYAGQLP---ADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDG  397 (675)
T ss_dssp             CHHHHTHHHHTTCTTHHHHHHHHTTTTSCCCCSSSCCCCCCCC---CSCHHHHHHHTTTSSCCEEHHHHHHHHHHHTTTT
T ss_pred             CHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             7999999998809899999999828998678887754357578---8771346554307556538899999998743188


Q ss_pred             -EECCCEEEEEECCCCC----------CEECCHHHHHHHHHHHHHHCC--------CCCCEEC-CCCCCEEEEEECCEEE
Q ss_conf             -6726189984338887----------252799999999999997237--------9983400-2479805888814036
Q batch____       440 -IYRPLSITKVDPPVPG----------ERVFPESIVRTVVHMMESVAL--------PGGGGVK-AAIKGYRIAIKTGTAK  499 (588)
Q Consensus       440 -~~~p~~v~k~~~~~~~----------~~v~s~~~a~~i~~~l~~vv~--------~~gtg~~-a~~~g~~vaGKTGTAq  499 (588)
                       .+.|++|.++++....          ++++|+++++.|+++|+.||+        +.|||+. +.++||+|||||||||
T Consensus       398 ~~~~P~~V~~I~d~~g~~i~~~~~~~~~~~is~~~a~~~~~~l~~Vv~~~~~~~~~~~Gtg~~~~~~~g~~vaGKTGTAq  477 (675)
T c1pmdA_         398 VMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQ  477 (675)
T ss_dssp             CEECCBCCCEEECSSSSCEEECCCCEEECCSCHHHHHHHHHHHHTTSSCSSSCSSCCSSSSSCSSCBTTBCCEEEEECCC
T ss_pred             EEECCEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE
T ss_conf             68357889999989998977168653444689999999999999984134433210377400123369733766715025


Q ss_pred             EECCCCC----CCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             2068887----678640699999750898299999994778888752023489999999999998289998888888531
Q batch____       500 KVGPDGR----YINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPDALTTGDKNE  575 (588)
Q Consensus       500 ~~~~~~~----~~~~~~~wfvG~~P~~~P~~av~V~v~~~~~~~~~G~~~AaPv~~~i~~~~l~~~~i~p~~~~~~~~~~  575 (588)
                      +......    ...+|++||+||+|++||+|+++|||++|++   +|+.+|+|+|+.||++++.+++..|...+......
T Consensus       478 ~~~~~~g~y~~~~~~~~~sfvG~~P~~~P~~~~~V~v~~p~~---~g~~~aa~v~~~i~~~~~~~~~~~~~~~~~~~~~~  554 (675)
T c1pmdA_         478 IADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEH---YSGIQLGEFANPILERASAMKDSLNLQTTAKALEQ  554 (675)
T ss_dssp             CCCCSSSSSCCSTTCCCCEEEEESSSSSCSCEEEEEEEEESS---CCHHHHHHHHHHHHHHHHHTTTTSTTSSSTTTTTT
T ss_pred             EECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCC---CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             105777753466566207999998328883999999967887---78400278999999999986186666777776422


Q ss_pred             E
Q ss_conf             4
Q batch____       576 F  576 (588)
Q Consensus       576 ~  576 (588)
                      .
T Consensus       555 ~  555 (675)
T c1pmdA_         555 V  555 (675)
T ss_dssp             S
T ss_pred             C
T ss_conf             2