Phyre 2 alignment of P75883 with d2b8ma1

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Job Description | P75883
Confidence | 17.85% | Date | Thu Jan 5 12:15:35 GMT 2012
Rank | 100 | Aligned Residues | 29
% Identity | 10% | Template | d2b8ma1
SCOP info | Double-stranded beta-helix | RmlC-like cupins | MJ0764-like
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | M | V | I | T | P | E | G | E | T | V | V | A | P | V | A | L | W | N | K | R | H | V | E | P | P | P | G | S | Q | L | W | L | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | I | I | I | K | G | E | X | T | L | T | L | E | D | Q | . | . | . | . | . | E | P | H | N | Y | K | E | G | N | I | V | Y | V | P
Template Known Secondary structure |  |  |  |  |  |  | S |  |  |  |  |  |  | T | T | S | . | . | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 70 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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