Phyre 2 alignment of P75883 with c2hc8A_

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Job Description | P75883
Confidence | 35.29% | Date | Thu Jan 5 12:15:35 GMT 2012
Rank | 37 | Aligned Residues | 29
% Identity | 24% | Template | c2hc8A_
PDB info | PDB header:transport protein | Chain: A: PDB Molecule:cation-transporting atpase, p-type; | PDBTitle: structure of the a. fulgidus copa a-domain
Resolution | 1.65 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | N | N | V | M | V | I | T | P | E | G | E | T | V | V | A | P | V | A | L | W | N | K | R | H | V | E | P | P | P | G | S | Q | L | W | L | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | K | T | A | V | V | I | R | . | D | G | K | E | I | A | V | P | V | E | . | . | . | . | . | . | . | E | V | A | V | G | D | I | V | I | V | R
Template Known Secondary structure |  |  | S |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  | G | G | . | . | . | . | . | . | . | G |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 224 | . | . | . | . | . | 230 | . |  | . | . | . | . | . | . | . | . | 240 | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | 250 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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