Phyre 2 Results for P75883

Email | l.a.kelley@imperial.ac.uk
Description | P75883
Date | Thu Jan 5 12:15:35 GMT 2012
Unique Job ID | ad0e34a9618c3b7f

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3p42D_ |
|  | 100.0 | 97 | PDB header:unknown function Chain: D: PDB Molecule:predicted protein; PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon
2 | c2j58G_ |
|  | 99.8 | 18 | PDB header:membrane protein Chain: G: PDB Molecule:outer membrane lipoprotein wza; PDBTitle: the structure of wza
3 | c2w8iG_ |
|  | 99.8 | 19 | PDB header:membrane protein Chain: G: PDB Molecule:putative outer membrane lipoprotein wza; PDBTitle: crystal structure of wza24-345.
4 | d2fug13 |
|  | 81.9 | 16 | Fold:beta-Grasp (ubiquitin-like) Superfamily:Nqo1 middle domain-like Family:Nqo1 middle domain-like
5 | c2fugA_ |
|  | 75.5 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase chain 1; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus
6 | c3ibmB_ |
|  | 56.1 | 25 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of cupin 2 domain-containing protein hhal_0468 from2 halorhodospira halophila
7 | c2vldA_ |
|  | 52.1 | 28 | PDB header:hydrolase Chain: A: PDB Molecule:upf0286 protein pyrab01260; PDBTitle: crystal structure of a repair endonuclease from pyrococcus2 abyssi
8 | c3ixzA_ |
|  | 51.7 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:potassium-transporting atpase alpha; PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride
9 | d1lr5a_ |
|  | 51.7 | 12 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
10 | c3s7eB_ |
|  | 49.5 | 19 | PDB header:allergen Chain: B: PDB Molecule:allergen ara h 1, clone p41b; PDBTitle: crystal structure of ara h 1
11 | d1uika2 |
|  | 48.7 | 9 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
12 | c3b8eC_ |
|  | 48.1 | 21 | PDB header:hydrolase/transport protein Chain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump
13 | d1uika1 |
|  | 47.9 | 6 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
14 | c1cauB_ |
|  | 47.8 | 12 | PDB header:seed storage protein Chain: B: PDB Molecule:canavalin; PDBTitle: determination of three crystal structures of canavalin by molecular2 replacement
15 | d1uija1 |
|  | 47.5 | 9 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
16 | c2cauA_ |
|  | 46.7 | 6 | PDB header:plant protein Chain: A: PDB Molecule:protein (canavalin); PDBTitle: canavalin from jack bean
17 | d1rwsa_ |
|  | 46.0 | 22 | Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS
18 | d2d40a1 |
|  | 44.8 | 10 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like
19 | c3jzvA_ |
|  | 44.6 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rru_a2000; PDBTitle: crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain.
20 | d1fxza2 |
|  | 43.5 | 12 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
21 | d3bu7a1 |
| not modelled | 43.1 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like
22 | c3bu7A_ |
| not modelled | 43.1 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:gentisate 1,2-dioxygenase; PDBTitle: crystal structure and biochemical characterization of gdosp,2 a gentisate 1,2-dioxygenase from silicibacter pomeroyi
23 | c3c3vA_ |
| not modelled | 43.1 | 11 | PDB header:allergen Chain: A: PDB Molecule:arachin arah3 isoform; PDBTitle: crystal structure of peanut major allergen ara h 3
24 | c3rfuC_ |
| not modelled | 42.9 | 13 | PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase
25 | d1uija2 |
| not modelled | 42.5 | 3 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
26 | d1od5a2 |
| not modelled | 41.5 | 18 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
27 | d1dgja2 |
| not modelled | 41.5 | 24 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins
28 | d1dgwa_ |
| not modelled | 41.2 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
29 | c3ehkC_ |
| not modelled | 38.9 | 18 | PDB header:plant protein Chain: C: PDB Molecule:prunin; PDBTitle: crystal structure of pru du amandin, an allergenic protein2 from prunus dulcis
30 | d1j58a_ |
| not modelled | 38.8 | 12 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
31 | c1fxzC_ |
| not modelled | 37.6 | 11 | PDB header:plant protein Chain: C: PDB Molecule:glycinin g1; PDBTitle: crystal structure of soybean proglycinin a1ab1b homotrimer
32 | c2oa2A_ |
| not modelled | 37.2 | 9 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bh2720 protein; PDBTitle: crystal structure of bh2720 (10175341) from bacillus halodurans at2 1.41 a resolution
33 | c2dgyA_ |
| not modelled | 36.1 | 22 | PDB header:translation Chain: A: PDB Molecule:mgc11102 protein; PDBTitle: solution structure of the eukaryotic initiation factor 1a2 in mgc11102 protein
34 | c2zxeA_ |
| not modelled | 36.0 | 18 | PDB header:hydrolase/transport protein Chain: A: PDB Molecule:na, k-atpase alpha subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
35 | c3kglB_ |
| not modelled | 35.6 | 14 | PDB header:plant protein Chain: B: PDB Molecule:cruciferin; PDBTitle: crystal structure of procruciferin, 11s globulin from2 brassica napus
36 | d2phla2 |
| not modelled | 35.6 | 9 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
37 | c2hc8A_ |
| not modelled | 35.3 | 24 | PDB header:transport protein Chain: A: PDB Molecule:cation-transporting atpase, p-type; PDBTitle: structure of the a. fulgidus copa a-domain
38 | c2e9qA_ |
| not modelled | 35.0 | 12 | PDB header:plant protein Chain: A: PDB Molecule:11s globulin subunit beta; PDBTitle: recombinant pro-11s globulin of pumpkin
39 | c3kscD_ |
| not modelled | 34.8 | 12 | PDB header:plant protein Chain: D: PDB Molecule:lega class; PDBTitle: crystal structure of pea prolegumin, an 11s seed globulin2 from pisum sativum l.
40 | d2phda1 |
| not modelled | 34.8 | 18 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Gentisate 1,2-dioxygenase-like
41 | c3k2oB_ |
| not modelled | 34.7 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:bifunctional arginine demethylase and lysyl-hydroxylase PDBTitle: structure of an oxygenase
42 | c2d40C_ |
| not modelled | 34.6 | 11 | PDB header:oxidoreductase Chain: C: PDB Molecule:putative gentisate 1,2-dioxygenase; PDBTitle: crystal structure of z3393 from escherichia coli o157:h7
43 | c3uyjA_ |
| not modelled | 34.6 | 30 | PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase 8; PDBTitle: crystal structure of jmjd5 catalytic core domain in complex with2 nickle and alpha-kg
44 | d2f4pa1 |
| not modelled | 34.1 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like
45 | c3kd4A_ |
| not modelled | 33.9 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:putative protease; PDBTitle: crystal structure of a putative protease (bdi_1141) from2 parabacteroides distasonis atcc 8503 at 2.00 a resolution
46 | c2vpvA_ |
| not modelled | 33.4 | 25 | PDB header:cell cycle Chain: A: PDB Molecule:protein mif2; PDBTitle: dimerization domain of mif2p
47 | c3qacA_ |
| not modelled | 33.3 | 9 | PDB header:plant protein Chain: A: PDB Molecule:11s globulin seed storage protein; PDBTitle: structure of amaranth 11s proglobulin seed storage protein from2 amaranthus hypochondriacus l.
48 | c3kgzA_ |
| not modelled | 33.2 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris
49 | c1uijA_ |
| not modelled | 32.0 | 3 | PDB header:sugar binding protein Chain: A: PDB Molecule:beta subunit of beta conglycinin; PDBTitle: crystal structure of soybean beta-conglycinin beta2 homotrimer (i122m/k124w)
50 | c2xdvA_ |
| not modelled | 32.0 | 17 | PDB header:nuclear protein Chain: A: PDB Molecule:myc-induced nuclear antigen; PDBTitle: crystal structure of the catalytic domain of flj14393
51 | c2vqaC_ |
| not modelled | 31.3 | 12 | PDB header:metal-binding protein Chain: C: PDB Molecule:sll1358 protein; PDBTitle: protein-folding location can regulate mn versus cu- or zn-2 binding. crystal structure of mnca.
52 | c3al6A_ |
| not modelled | 31.2 | 20 | PDB header:unknown function Chain: A: PDB Molecule:jmjc domain-containing protein c2orf60; PDBTitle: crystal structure of human tyw5
53 | c2q30C_ |
| not modelled | 31.2 | 28 | PDB header:unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a rmlc-like cupin protein (dde_2303) from2 desulfovibrio desulfuricans subsp. at 1.94 a resolution
54 | d1vj2a_ |
| not modelled | 31.0 | 7 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1459-like
55 | d1p9ka_ |
| not modelled | 29.5 | 8 | Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:YbcJ-like
56 | d2phla1 |
| not modelled | 28.9 | 9 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
57 | d1vrba1 |
| not modelled | 28.6 | 40 | Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Asparaginyl hydroxylase-like
58 | c2eaaB_ |
| not modelled | 28.5 | 6 | PDB header:plant protein Chain: B: PDB Molecule:7s globulin-3; PDBTitle: crystal structure of adzuki bean 7s globulin-3
59 | c2r32A_ |
| not modelled | 28.5 | 24 | PDB header:immune system Chain: A: PDB Molecule:gcn4-pii/tumor necrosis factor ligand PDBTitle: crystal structure of human gitrl variant
60 | c2i45C_ |
| not modelled | 28.3 | 7 | PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein nmb1881 from neisseria meningitidis
61 | c3d82A_ |
| not modelled | 27.6 | 7 | PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution
62 | c3h7yA_ |
| not modelled | 27.2 | 21 | PDB header:biosynthetic protein Chain: A: PDB Molecule:bacilysin biosynthesis protein bacb; PDBTitle: crystal structure of bacb, an enzyme involved in bacilysin synthesis,2 in tetragonal form
63 | d1juha_ |
| not modelled | 27.2 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Quercetin 2,3-dioxygenase-like
64 | d1y9qa2 |
| not modelled | 27.0 | 11 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Probable transcriptional regulator VC1968, C-terminal domain
65 | d1fxza1 |
| not modelled | 26.6 | 12 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein
66 | c2pfwB_ |
| not modelled | 25.5 | 14 | PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution
67 | c3ht2A_ |
| not modelled | 25.3 | 17 | PDB header:lyase Chain: A: PDB Molecule:remf protein; PDBTitle: zink containing polyketide cyclase remf from streptomyces2 resistomycificus
68 | c3cewA_ |
| not modelled | 25.2 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized cupin protein; PDBTitle: crystal structure of a cupin protein (bf4112) from bacteroides2 fragilis. northeast structural genomics consortium target bfr205
69 | c2kytA_ |
| not modelled | 25.1 | 33 | PDB header:hydrolase Chain: A: PDB Molecule:group xvi phospholipase a2; PDBTitle: solution struture of the h-rev107 n-terminal domain
70 | d1yhfa1 |
| not modelled | 25.1 | 11 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like
71 | c3fjsC_ |
| not modelled | 25.0 | 25 | PDB header:biosynthetic protein Chain: C: PDB Molecule:uncharacterized protein with rmlc-like cupin fold; PDBTitle: crystal structure of a putative biosynthetic protein with rmlc-like2 cupin fold (reut_b4087) from ralstonia eutropha jmp134 at 1.90 a3 resolution
72 | d1h2ka_ |
| not modelled | 24.8 | 30 | Fold:Double-stranded beta-helix Superfamily:Clavaminate synthase-like Family:Hypoxia-inducible factor HIF ihhibitor (FIH1)
73 | d1sq4a_ |
| not modelled | 24.4 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
74 | c3l2hD_ |
| not modelled | 24.4 | 21 | PDB header:isomerase Chain: D: PDB Molecule:putative sugar phosphate isomerase; PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution
75 | c3b8cB_ |
| not modelled | 24.4 | 15 | PDB header:hydrolase Chain: B: PDB Molecule:atpase 2, plasma membrane-type; PDBTitle: crystal structure of a plasma membrane proton pump
76 | c2gu9B_ |
| not modelled | 24.3 | 21 | PDB header:immune system Chain: B: PDB Molecule:tetracenomycin polyketide synthesis protein; PDBTitle: crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure
77 | d1rm6c2 |
| not modelled | 23.8 | 10 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins
78 | d1l5pa_ |
| not modelled | 23.5 | 20 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related
79 | d1iuea_ |
| not modelled | 23.4 | 6 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related
80 | c3j08A_ |
| not modelled | 23.4 | 24 | PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
81 | d1t3qa2 |
| not modelled | 23.2 | 11 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins
82 | d2cu3a1 |
| not modelled | 23.2 | 15 | Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS
83 | d1awda_ |
| not modelled | 22.7 | 16 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin-related
84 | c3h9iB_ |
| not modelled | 22.6 | 15 | PDB header:transport protein Chain: B: PDB Molecule:cation efflux system protein cusb; PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli
85 | d1v70a_ |
| not modelled | 22.3 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:TM1287-like
86 | d1vlba2 |
| not modelled | 21.3 | 22 | Fold:beta-Grasp (ubiquitin-like) Superfamily:2Fe-2S ferredoxin-like Family:2Fe-2S ferredoxin domains from multidomain proteins
87 | c3i7dB_ |
| not modelled | 21.2 | 18 | PDB header:isomerase Chain: B: PDB Molecule:sugar phosphate isomerase; PDBTitle: crystal structure of sugar phosphate isomerase from a cupin2 superfamily spo2919 from silicibacter pomeroyi (yp_168127.1) from3 silicibacter pomeroyi dss-3 at 2.30 a resolution
88 | c3rnsA_ |
| not modelled | 20.9 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis
89 | d1sefa_ |
| not modelled | 20.8 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
90 | c1sefA_ |
| not modelled | 20.8 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of cupin domain protein ef2996 from enterococcus2 faecalis
91 | d1rc6a_ |
| not modelled | 20.6 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
92 | c2yu1A_ |
| not modelled | 20.5 | 10 | PDB header:oxidoreductase Chain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 1a; PDBTitle: crystal structure of hjhdm1a complexed with a-ketoglutarate
93 | c1t3qD_ |
| not modelled | 20.4 | 11 | PDB header:oxidoreductase Chain: D: PDB Molecule:quinoline 2-oxidoreductase small subunit; PDBTitle: crystal structure of quinoline 2-oxidoreductase from pseudomonas2 putida 86
94 | c3cwiA_ |
| not modelled | 19.8 | 12 | PDB header:biosynthetic protein Chain: A: PDB Molecule:thiamine-biosynthesis protein this; PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137
95 | d1sfna_ |
| not modelled | 19.5 | 14 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:YlbA-like
96 | c1mhsA_ |
| not modelled | 19.0 | 21 | PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase
97 | c1z2mA_ |
| not modelled | 18.7 | 16 | PDB header:signaling protein Chain: A: PDB Molecule:interferon, alpha-inducible protein (clone ifi- PDBTitle: crystal structure of isg15, the interferon-induced2 ubiquitin cross reactive protein
98 | c3lwcA_ |
| not modelled | 18.1 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of structural genomics, unknown function2 (yp_766765.1) from rhizobium leguminosarum bv. viciae 3841 at 1.40 a3 resolution
99 | d1od5a1 |
| not modelled | 18.0 | 13 | Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein