Phyre 2 alignment of P75883 with c2vldA_

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Job Description | P75883
Confidence | 52.09% | Date | Thu Jan 5 12:15:35 GMT 2012
Rank | 7 | Aligned Residues | 29
% Identity | 28% | Template | c2vldA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:upf0286 protein pyrab01260; | PDBTitle: crystal structure of a repair endonuclease from pyrococcus2 abyssi
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |  |  |  |  |  | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | N | N | V | M | V | I | T | P | E | G | E | T | V | V | A | P | V | A | L | . | . | . | . | . | W | N | K | R | H | V | E | P | P | P | G | S | Q | L | W | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Sequence |  | D | R | I | I | I | I | K | P | D | G | S | F | L | I | H | Q | N | K | K | R | E | P | V | N | W | . | . | . | . | . | . | Q | P | P | G | S | K | V | T | F
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | S | S |  | S | S |  | S |  |  | . | . | . | . | . | . |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . | 80 | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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