Phyre 2 alignment of P75883 with c3kgzA_

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Job Description | P75883
Confidence | 33.18% | Date | Thu Jan 5 12:15:35 GMT 2012
Rank | 48 | Aligned Residues | 28
% Identity | 18% | Template | c3kgzA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; | PDBTitle: crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris
Resolution | 1.85 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | M | V | I | T | P | E | G | E | T | V | V | A | P | V | A | L | W | N | K | R | H | V | E | P | P | P | G | S | Q | L | W | L | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | M | I | H | R | G | H | G | Q | C | L | V | G | E | . | . | . | . | . | . | T | I | S | D | V | A | Q | G | D | L | V | F | I | P
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . |  |  |  |  |  |  | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . |  |  |  |  |  |  | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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