35 c2rfaA_ Probab=99.88   E-value=9.8e-21  Score=141.95  Aligned_columns=184  Identities=20%

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHH-HCCCHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             8729999998095799999996-100012201367433345664058996888999998193999999996169854335
Q batch____       399 GTPALFLAMMNGHTDNVKIFMQ-EIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQE  477 (632)
Q Consensus       399 G~TALhlAA~nGH~DVVKlLL~-~gadI~d~~~~n~~t~lhlaaaKd~nG~TaLhlAA~nGH~EVVKlLL~~GAdin~~~  477 (632)
                      .+||||+|+++||.++|+.||. +|+++.               .+|.+|+||||+|+.+|+.++++.++..+.+.....
T Consensus         2 ~eTpLh~A~~~g~~~~v~~LL~~~gadin---------------~~d~~G~TpLh~A~~~~~~~~~~~l~~~~~~~~~~~   66 (222)
T c2rfaA_           2 WESPLLLAAKENDVQALSKLLKFEGCEVH---------------QRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP   66 (222)
T ss_dssp             TTCHHHHHHHTTCHHHHHHHHTTTCSCTT---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHHCCCCCC---------------CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             73778999980999999999996686355---------------679887899999996200222222222222222222


Q ss_pred             CCCCCHHHHHHH------------------------------------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             567412788873------------------------------------26888889899999869589999998438653
Q batch____       478 LLNKKLVMSILA------------------------------------MKIHDGEPGLYAAMENNHPLCVTRFLSKINGI  521 (632)
Q Consensus       478 ~~g~t~l~~aa~------------------------------------akD~dG~TpLh~AA~nGhldvVk~LLek~tal  521 (632)
                      ............                                    .....|.++...+...................
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (222)
T c2rfaA_          67 MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI  146 (222)
T ss_dssp             CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             22222222222222222222222221013686112234555432234531117871011222222222222222222222


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHC
Q ss_conf             10023775457567411678878799999981978999999840213555642262017899862357988699999976
Q batch____       522 AFKYKLSKANIMDLLKGATAQGTPALYIAMSKGNEDVVLSYISTLGAFAKKHSFSQHQLFTLLAAKNHDNMSAVHIAIHH  601 (632)
Q Consensus       522 ~~a~~~~~~diV~LL~~~d~dG~TALHlAA~nGH~dVV~~LIs~ga~l~~a~~~~~~~i~~LLnAkd~dG~TaLhlAa~~  601 (632)
                                     ......+.+....+...|.....................+..     ++.+|++|+||||+|+.+
T Consensus       147 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~d~~G~TpLh~A~~~  206 (222)
T c2rfaA_         147 ---------------RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSL-----ELVPNNQGLTPFKLAGVE  206 (222)
T ss_dssp             ---------------TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCG-----GGCCCTTSCCHHHHHHHH
T ss_pred             ---------------CCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHCCCCCCCCCC-----CCCCCCCCCCHHHHHHHC
T ss_conf             ---------------222222222100000258622221001223202765654542-----246889757989999980


Q ss_pred             CCHHHHHHHHHHHHHH
Q ss_conf             9589999999988755
Q batch____       602 KHYKTVETYYAAINAI  617 (632)
Q Consensus       602 GH~eVVk~li~A~~~~  617 (632)
                      ||.++|++|+....+|
T Consensus       207 g~~~iv~~LL~~GAdI  222 (222)
T c2rfaA_         207 GNIVMFQHLMQKRKHI  222 (222)
T ss_dssp             TCHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHCCCCC
T ss_conf             9999999999789899