17 c3sp1B_ Probab=99.90   E-value=7.5e-22  Score=151.56  Aligned_columns=218  Identities=18%

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHH-----HCCEEEEEEECCCCCCCCHHH----HHHHHHHHHHCCCCCCCCEEEECCH
Q ss_conf             8675876744679999998999997-----188599998028765386679----9999999998388788870662000
Q batch____        21 APSPSGELHFGSLIAALGSYLQARA-----RQGRWLVRIEDIDPPREVPGA----AETILRQLEHYGLHWDGDVLWQSQR   91 (308)
Q Consensus        21 APSPtG~LHiG~~r~al~n~l~Ar~-----~~G~~iLRieDtD~~r~~~~~----~~~I~~~L~wlGl~~De~~~~QS~r   91 (308)
                      .|+|.|++||||+|++++...++|-     ++-.|++.|.|+|......++    .+.+++++++||+.+|.....+|++
T Consensus        29 GPTvy~~~HIGhar~~v~~Dvl~R~lr~~G~~V~~v~~iTDid~ki~~~e~~~~~~~~f~~~~~~L~i~~~~~~~r~teh  108 (439)
T c3sp1B_          29 GPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYKVNYAMNITDIGHGLTVYEISEFFTEAFFNDCRKLNIVYPDKVLVASKH  108 (439)
T ss_dssp             CCBSSSCCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEBCSCCCCCHHHHHHHHHHHHHHHHHHTTCCCCSEEEEGGGC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
T ss_conf             58648844411028899999999999967981899970562233989999999999999999997288998454004401


Q ss_pred             HHHHHHHHHHHHHCCCEEE-----CCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEEEECCCC
Q ss_conf             8999999999998898652-----48898998641135899876897334834299971278614889899999607888
Q batch____        92 HDAYREALAWLHEQGLSYY-----CTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKL  166 (308)
Q Consensus        92 ~~~Y~~~~~~Li~~G~aY~-----C~Csr~e~~~~~~~y~~~cr~~~~~~~~~~~Rlr~~~~~~~~~D~~~g~~~~~~~~  166 (308)
                      .+.+.+++++|+++|.||.     |||.++.         ..|-.++....                           +.
T Consensus       109 ~~~i~~~i~~L~~~G~aY~~~~~v~f~v~~~---------~~yg~ls~~~~---------------------------K~  152 (439)
T c3sp1B_         109 IPIMIEVVKILEEKKITYFSNGNVYFDTSCF---------KSYGEMAGIKF---------------------------KR  152 (439)
T ss_dssp             HHHHHHHHHHHHHTTCEEEETTEEEECGGGC---------TTTTGGGCCCC---------------------------SS
T ss_pred             HHHHHHHHHHHHHCCCEEEECCCEEEEHHHC---------CCCCHHCCCCC---------------------------CC
T ss_conf             7999999999997798464028574012130---------01003108843---------------------------24


Q ss_pred             CCCCEEEEEC----------------CCCCH----------HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHC-C
Q ss_conf             8787289953----------------88641----------2225444111229984774330005918999999985-8
Q batch____       167 AREDFIIHRR----------------DGLFA----------YNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF-G  219 (308)
Q Consensus       167 ~~~D~vi~R~----------------dg~pt----------Y~fA~vVDD~~~gIThViRG~d~l~~t~~Q~~l~~aL-g  219 (308)
                      ...||++++.                .|.|.          |.|...+|-|..|+.|+      -........+..++ |
T Consensus       153 ~~~DF~Lwk~~~~~~~~~~~~~spWG~grPgWhiec~A~~~~~~g~~~DIH~gG~Dl~------fpHh~~~~a~~~a~~~  226 (439)
T c3sp1B_         153 NKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLGGVDHI------GVHHINEIAIAECFLN  226 (439)
T ss_dssp             STTCEEEEEECSCCCTTCCCBCCTTCSEEECHHHHHHHHHHHHHTTCCCEEEEEGGGT------TTHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHCCCCCCEEEEECCCC------CCCHHHHHHHHHHCCC
T ss_conf             7221012323344547997115788876883114411110122388753789704113------6513689999973789


Q ss_pred             CCCCEEEEEEEEECCCCCEEEECCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             8997389842336788866011153136666896268999999849987411013899999999
Q batch____       220 WKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFSVEQILQS  283 (308)
Q Consensus       220 ~~~P~y~H~pli~~~~g~kLSKr~~~~~i~~g~~~~~~~~~L~~lG~~~~~~~~~~s~~~~l~~  283 (308)
                      .+++.++.+.-.++.+|+|+||+.+...+.+++.+.++.-+|...++..+..   ||.+.+.+.
T Consensus       227 ~~~~~~~~h~g~l~~~g~KMSks~~~~~~~~~~~~d~lR~~ll~~~y~~~~d---fs~e~l~~a  287 (439)
T c3sp1B_         227 KKWCDVFVHGEFLIMDYNKMSFITVKDLEDQNFSPLDFRYLCLTSHYRNQLK---FSLDNLQAS  287 (439)
T ss_dssp             SCCCSEEEEECCEESSSSBCCCCCHHHHHHTTCCHHHHHHHHHTSCTTSCEE---CCHHHHHHH
T ss_pred             CCCCCEEEECCEEEEECCCCCEEEHHHHHHCCCCHHHHHHHHHHCCCCCCCC---CCHHHHHHH
T ss_conf             9877599957178850785312461233341688999999998379999842---698999999