13 c1irxA_ Probab=100.00  E-value=0  Score=371.56  Aligned_columns=276  Identities=13%

Q ss_pred             CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH-----HCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCE-
Q ss_conf             8986387248675876744679999998999997-----1885999980287653866799999999998388788870-
Q batch____        12 TDTQYIGRFAPSPSGELHFGSLIAALGSYLQARA-----RQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDV-   85 (308)
Q Consensus        12 ~~~~vvtRFAPSPtG~LHiG~~r~al~n~l~Ar~-----~~G~~iLRieDtD~~r~~~~~~~~I~~~L~wlGl~~De~~-   85 (308)
                      +..+||+||+|||||+|||||+|+|++||++||.     ++|+|+|||||||+.|+.+++++.+++  +|+|+.||++| 
T Consensus        16 ~~~~~~v~~g~SPTG~lHIG~~Rtal~~~l~ar~l~~~G~~~~filrieDtD~~R~v~~~~~~~~~--~~lG~~~~e~p~   93 (507)
T c1irxA_          16 EKEKYVVESGITPSGYVHVGNFRELFTAYIVGHALRDKGYEVRHIHMWDDYDRFRKVPRNVPQEWK--DYLGMPISEVPD   93 (507)
T ss_dssp             CCSEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHTTTCEEEEEEEECTTSBCCCCCSSSCGGGG--GGTTSBGGGSCC
T ss_pred             CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHH--HHCCCCCCCCCC
T ss_conf             788189996597898770241089999999999998369984999987467731003445999999--875998100375


Q ss_pred             ----------EEECCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCC---------CCCCCCCCCCCC------CCCE
Q ss_conf             ----------662000899999999999889865248898998641135---------899876897334------8342
Q batch____        86 ----------LWQSQRHDAYREALAWLHEQGLSYYCTCTRARIQSIGGI---------YDGHCRVLHHGP------DNAA  140 (308)
Q Consensus        86 ----------~~QS~r~~~Y~~~~~~Li~~G~aY~C~Csr~e~~~~~~~---------y~~~cr~~~~~~------~~~~  140 (308)
                                |+||++.++|.++. .+.+.+.+|.|+|+.+..+..+..         +.+.|++...++      .+..
T Consensus        94 ~~g~~~~~~~~~~s~~~~~~~~~~-~~~d~~~~~~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (507)
T c1irxA_          94 PWGCHESYAEHFMRKFEEEVEKLG-IEVDLLYASELYKRGEYSEEIRLAFEKRDKIMEILNKYREIAKQPPLPENWWPAM  172 (507)
T ss_dssp             TTSSSSSHHHHHHHHHHHHHHTTT-CCCEEEEHHHHHHTTTTHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCCTTCCSEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCCCCC
T ss_conf             668721058899999999999714-3110452330008789999999999808997151321211002343010058766


Q ss_pred             EEEEC---CCCCCEEEEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCC-----CCHHHH
Q ss_conf             99971---2786148898999996078888787289953886412225444111229984774330005-----918999
Q batch____       141 VRIRQ---QHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIE-----PTVRQI  212 (308)
Q Consensus       141 ~Rlr~---~~~~~~~~D~~~g~~~~~~~~~~~D~vi~R~dg~ptY~fA~vVDD~~~gIThViRG~d~l~-----~t~~Q~  212 (308)
                      .+.+.   ....+.+.|.+++.++...+ ..+|++|.|.||.|||++++|+||+.++|||+|||+||+.     +|++|+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~i~~~dg~~~y~~~~~~~~~~~~vd~~i~G~DH~~~~~~~~~~~~i  251 (507)
T c1irxA_         173 VYCPEHRREAEIIEWDGGWKVKYKCPEG-HEGWVDIRSGNVKLRWRVDWPMRWSHFGVDFEPAGKDHLVAGSSYDTGKEI  251 (507)
T ss_dssp             EECTTTCCEECEEEECSSSCEEECCSSS-CCCEECTTSSCEEECHHHHHHHHHHHSCCCBCCEEHHHHSTTSHHHHHHHH
T ss_pred             CEECCCCCCCCEEEECCCEEEEEEECCC-CCCCCEEEECCCCCCCCCCHHHHHHHCCCCEECCCCHHCCCCHHHHHHHHH
T ss_conf             3621468887427867982999995689-877413440499661120077406761997891381002750355678999


Q ss_pred             HHHHHCCCCCCEEEEEEEEECCCCCEEEECCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
Q ss_conf             99998588997389842336788866011153136666896268999999849987411013899999999986299888
Q batch____       213 SLYQLFGWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFSVEQILQSAVKNWRLTA  292 (308)
Q Consensus       213 ~l~~aLg~~~P~y~H~pli~~~~g~kLSKr~~~~~i~~g~~~~~~~~~L~~lG~~~~~~~~~~s~~~~l~~~i~~f~~~~  292 (308)
                       ++++|||++|+|+|+|++....|+++|||...     ++.+.+++|++.++||+.......+..+.+...    +++.+
T Consensus       252 -~~~alg~~~P~~~h~~~is~~~g~~is~~d~~-----~~~~~~~~ryl~l~~~~~~~~~~~~~~~~~~~~----~~~~~  321 (507)
T c1irxA_         252 -IKEVYGKEAPLSLMYEFVGIKGQNVILLSDLY-----EVLEPGLVRFIYARHRPNKEIKIDLGLGILNLY----DEFEK  321 (507)
T ss_dssp             -HHHHHCCCCCBCCEECCEEESCCCCCCHHHHH-----TTSCHHHHHHHHHSSCTTSCEEECCSTTHHHHH----HHHHH
T ss_pred             -HHHHHCCCCCEEEEECEEECCCCCCCCHHHHH-----HHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH----CCHHH
T ss_conf             -99981898716542010147899710199974-----307999999999627988553102698899862----13343


Q ss_pred             CCCCCEECC
Q ss_conf             787832235
Q batch____       293 VPESAIVNS  301 (308)
Q Consensus       293 i~~~~~v~d  301 (308)
                      ++++...++
T Consensus       322 l~~~~~~~~  330 (507)
T c1irxA_         322 VERIYFGVE  330 (507)
T ss_dssp             HHHHHTTSC
T ss_pred             HHHHHCCCC
T ss_conf             221112589