BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (326 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P52052 Uncharacterized protein yggR n=137 Tax=Enterobac... 662 0.0 UniRef50_B6VP33 YggR protein (Fragment) n=1 Tax=Escherichia coli... 330 4e-89 UniRef50_C2LMJ4 Tfp pilus assembly protein PilT n=2 Tax=Proteus ... 319 8e-86 UniRef50_C8WRG4 Twitching motility protein n=5 Tax=Bacteria RepI... 305 1e-81 UniRef50_B5YDI3 Type IV pilus retraction protein PilT n=96 Tax=B... 288 3e-76 UniRef50_P24559 Twitching mobility protein n=63 Tax=Bacteria Rep... 286 8e-76 UniRef50_A5EV68 Twitching motility protein PilT n=4 Tax=Proteoba... 284 3e-75 UniRef50_C9RU77 Twitching motility protein n=5 Tax=Bacilli RepID... 281 2e-74 UniRef50_Q06581 Twitching motility protein n=117 Tax=Bacteria Re... 281 3e-74 UniRef50_Q2JJR9 Twitching motility protein n=60 Tax=Bacteria Rep... 276 5e-73 UniRef50_B8D2C8 Tfp pilus assembly protein, pilus retraction ATP... 274 3e-72 UniRef50_B2ULW6 Twitching motility protein n=4 Tax=Chlamydiae/Ve... 273 4e-72 UniRef50_B1I3G0 Twitching motility protein n=29 Tax=Firmicutes R... 270 7e-71 UniRef50_B2ULW5 Twitching motility protein n=17 Tax=cellular org... 270 7e-71 UniRef50_Q1J1R7 Tfp pilus assembly protein, pilus retraction ATP... 269 1e-70 UniRef50_Q3Z802 Twitching mobility protein n=13 Tax=Bacteria Rep... 266 6e-70 UniRef50_Q1K4H3 Twitching motility protein n=1 Tax=Desulfuromona... 266 7e-70 UniRef50_B8FGS0 Twitching motility protein n=1 Tax=Desulfatibaci... 266 1e-69 UniRef50_A5GHN1 Tfp pilus assembly protein, pilus retraction ATP... 265 1e-69 UniRef50_A8Z6P0 Twitching mobility protein n=12 Tax=Epsilonprote... 265 2e-69 UniRef50_Q3A779 Tfp pilus assembly protein, pilus retraction ATP... 264 3e-69 UniRef50_Q1V0I1 Type II Secretion PilT n=3 Tax=root RepID=Q1V0I1... 259 8e-68 UniRef50_Q0AZI8 Twitching motility protein n=1 Tax=Syntrophomona... 259 1e-67 UniRef50_B9LZ76 Twitching motility protein n=98 Tax=cellular org... 259 1e-67 UniRef50_C0D956 Putative uncharacterized protein n=1 Tax=Clostri... 258 2e-67 UniRef50_C3WB33 Twitching motility protein n=2 Tax=Fusobacterium... 258 3e-67 UniRef50_A6C2Q7 Twitching motility protein n=1 Tax=Planctomyces ... 258 3e-67 UniRef50_A5IML1 Twitching motility protein n=11 Tax=Thermotogace... 256 9e-67 UniRef50_B6BQP9 Type II Secretion PilT n=4 Tax=Proteobacteria Re... 255 1e-66 UniRef50_A9BA92 Tfp pilus assembly protein, pilus retraction ATP... 254 2e-66 UniRef50_D2R472 Twitching motility protein n=8 Tax=Bacteria RepI... 254 3e-66 UniRef50_UPI000190EDE4 Type II secretion, ATP-binding, protein n... 253 5e-66 UniRef50_C7R4E5 Twitching motility protein n=13 Tax=Bacteria Rep... 252 1e-65 UniRef50_UPI0001C37050 pili biogenesis protein PilT-like ATPase ... 250 6e-65 UniRef50_A6WCF2 Twitching motility protein n=56 Tax=Bacteria Rep... 249 1e-64 UniRef50_C1AA13 Twitching mobility protein n=1 Tax=Gemmatimonas ... 249 1e-64 UniRef50_Q1CXQ0 Twitching motility protein PilT n=6 Tax=Deltapro... 248 1e-64 UniRef50_C4Z3A4 Twitching motility protein PilT n=1 Tax=Eubacter... 248 1e-64 UniRef50_C8W152 Twitching motility protein n=2 Tax=Bacteria RepI... 248 2e-64 UniRef50_A5FPX9 Twitching motility protein n=4 Tax=Dehalococcoid... 248 2e-64 UniRef50_C8WIR6 Twitching motility protein n=1 Tax=Eggerthella l... 247 4e-64 UniRef50_C3RLB1 Twitching motility protein n=3 Tax=Bacteria RepI... 247 4e-64 UniRef50_Q1CXQ1 Twitching motility protein n=4 Tax=Myxococcales ... 246 7e-64 UniRef50_B8GP69 Type II secretion system protein (Twitching moti... 246 8e-64 UniRef50_Q8DLE1 Twitching mobility protein n=9 Tax=Cyanobacteria... 245 2e-63 UniRef50_C1RHW7 Pilus retraction protein PilT n=3 Tax=Actinobact... 245 2e-63 UniRef50_C4ZCI9 Predicted ATPase involved in pili biogenesis, Pi... 244 3e-63 UniRef50_B9Y805 Putative uncharacterized protein n=1 Tax=Holdema... 243 5e-63 UniRef50_Q1IRV7 Twitching motility protein n=13 Tax=Bacteria Rep... 243 6e-63 UniRef50_C4XHR9 Putative twitching mobility protein n=1 Tax=Desu... 243 6e-63 UniRef50_C7RKW6 Twitching motility protein n=1 Tax=Candidatus Ac... 243 8e-63 UniRef50_B9XBG1 Twitching motility protein n=1 Tax=bacterium Ell... 242 1e-62 UniRef50_B4CW85 Twitching motility protein n=1 Tax=Chthoniobacte... 241 3e-62 UniRef50_B8GL39 Twitching motility protein n=1 Tax=Thioalkalivib... 240 4e-62 UniRef50_A1SFQ7 Twitching motility protein n=31 Tax=Bacteria Rep... 239 7e-62 UniRef50_B2V7T3 Twitching motility protein n=8 Tax=Bacteria RepI... 239 8e-62 UniRef50_C4Z961 Predicted ATPase involved in pili biogenesis, Pi... 238 2e-61 UniRef50_A0RMV4 Twitching motility protein PilT n=6 Tax=Epsilonp... 238 2e-61 UniRef50_B2KCH7 Twitching motility protein n=1 Tax=Elusimicrobiu... 237 4e-61 UniRef50_Q2JR70 Twitching mobility protein PilT n=32 Tax=Cyanoba... 237 4e-61 UniRef50_B4D003 Twitching motility protein n=1 Tax=Chthoniobacte... 236 9e-61 UniRef50_A7I2W5 Twitching mobility protein n=7 Tax=Epsilonproteo... 236 1e-60 UniRef50_A6W7B3 Twitching motility protein n=6 Tax=Bacteria RepI... 234 2e-60 UniRef50_C9KK06 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 234 2e-60 UniRef50_A7A8S6 Putative uncharacterized protein n=2 Tax=Bacteri... 234 3e-60 UniRef50_A6GE25 Twitching motility protein n=2 Tax=Proteobacteri... 233 7e-60 UniRef50_Q2LRM4 Pili retraction protein n=11 Tax=Bacteria RepID=... 233 9e-60 UniRef50_C3WJA3 Pilus retraction protein PilT n=2 Tax=Fusobacter... 232 1e-59 UniRef50_D2L8D4 Type II secretion system protein E n=1 Tax=Desul... 232 1e-59 UniRef50_B1ZN20 Twitching motility protein n=3 Tax=Verrucomicrob... 232 1e-59 UniRef50_A4A7Z0 Twitching motility PilT family protein n=2 Tax=u... 231 2e-59 UniRef50_Q1DAU3 Twitching mobility protein n=44 Tax=Bacteria Rep... 230 4e-59 UniRef50_Q31PZ1 Twitching motility protein n=5 Tax=Cyanobacteria... 230 6e-59 UniRef50_C9RN76 Twitching motility protein n=1 Tax=Fibrobacter s... 229 9e-59 UniRef50_D1Y3N0 Twitching mobility protein n=1 Tax=Pyramidobacte... 229 1e-58 UniRef50_B8DPS9 Twitching motility protein n=4 Tax=Desulfovibrio... 229 1e-58 UniRef50_A5GMV2 Twitching motility protein n=3 Tax=Synechococcus... 228 2e-58 UniRef50_A6DTL1 Twitching motility protein n=1 Tax=Lentisphaera ... 228 2e-58 UniRef50_A5TVA4 Possible pilus assembly ATP-binding protein n=8 ... 228 3e-58 UniRef50_B2SPL0 Tfp pilus assembly protein n=67 Tax=Proteobacter... 227 5e-58 UniRef50_A3ZSU4 Twitching motility protein PilT n=2 Tax=Planctom... 226 7e-58 UniRef50_B6G0J4 Putative uncharacterized protein n=1 Tax=Clostri... 226 7e-58 UniRef50_D1N9I8 Twitching motility protein n=1 Tax=Victivallis v... 224 3e-57 UniRef50_C1A6T5 Twitching mobility protein n=1 Tax=Gemmatimonas ... 224 3e-57 UniRef50_C6RE58 Twitching mobility protein n=2 Tax=Campylobacter... 223 5e-57 UniRef50_Q2SCC2 Tfp pilus assembly protein, ATPase PilU n=58 Tax... 223 8e-57 UniRef50_A6DU37 Pili retraction protein n=1 Tax=Lentisphaera ara... 223 1e-56 UniRef50_A1AM74 Twitching motility protein n=1 Tax=Pelobacter pr... 222 1e-56 UniRef50_Q028H4 Twitching motility protein n=1 Tax=Candidatus So... 222 1e-56 UniRef50_B3E8J7 Twitching motility protein n=8 Tax=Desulfuromona... 222 1e-56 UniRef50_A6GEM2 Twitching motility protein n=1 Tax=Plesiocystis ... 221 4e-56 UniRef50_A1VIC5 Twitching motility protein n=2 Tax=Proteobacteri... 221 4e-56 UniRef50_B0MN56 Putative uncharacterized protein n=12 Tax=Bacter... 220 4e-56 UniRef50_C7QZF3 Twitching motility protein n=1 Tax=Jonesia denit... 219 9e-56 UniRef50_C9LRT0 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 219 9e-56 UniRef50_B5YIZ9 Twitching motility protein PilT n=4 Tax=Bacteria... 219 1e-55 UniRef50_UPI0001744C3C Pilus retraction protein PilT n=1 Tax=Ver... 218 2e-55 UniRef50_A1TQ20 Twitching motility protein n=3 Tax=Comamonadacea... 218 3e-55 UniRef50_A8VZF7 Tfp pilus assembly protein pilus retraction ATPa... 218 3e-55 UniRef50_A1K8L4 Twitching motility protein n=180 Tax=cellular or... 217 4e-55 UniRef50_B7C7D1 Putative uncharacterized protein n=1 Tax=Eubacte... 217 5e-55 UniRef50_UPI00016C3547 twitching motility protein PilT n=2 Tax=G... 216 6e-55 UniRef50_C0FXQ3 Putative uncharacterized protein n=1 Tax=Rosebur... 215 1e-54 UniRef50_Q1QT12 Twitching motility protein n=19 Tax=Gammaproteob... 214 2e-54 UniRef50_D2DXQ5 Twitching motility protein n=1 Tax=uncultured Ve... 214 4e-54 UniRef50_C4V5N5 Tfp pilus assembly protein PilT n=2 Tax=Selenomo... 214 4e-54 UniRef50_Q1ITV6 Twitching motility protein n=1 Tax=Candidatus Ko... 214 5e-54 UniRef50_B9YDY2 Putative uncharacterized protein n=6 Tax=Bacteri... 212 1e-53 UniRef50_C5T541 Twitching motility protein n=1 Tax=Acidovorax de... 212 2e-53 UniRef50_UPI0001746A79 hypothetical protein VspiD_01995 n=1 Tax=... 209 1e-52 UniRef50_C0AEU6 Type IV pilus retraction protein PilT n=1 Tax=Op... 209 1e-52 UniRef50_Q2ILF7 Twitching motility protein n=5 Tax=Myxococcales ... 209 1e-52 UniRef50_D0L1U2 Twitching motility protein n=6 Tax=Gammaproteoba... 208 2e-52 UniRef50_D2QYW4 Twitching motility protein n=4 Tax=Planctomyceta... 208 2e-52 UniRef50_C3XDC6 Twitching motility protein PilT n=1 Tax=Helicoba... 206 8e-52 UniRef50_Q2RY72 Type II secretion system protein E n=1 Tax=Rhodo... 205 1e-51 UniRef50_Q47FA9 Pilus retraction protein PilT n=7 Tax=Betaproteo... 204 3e-51 UniRef50_B1Y6E6 Twitching motility protein n=14 Tax=Burkholderia... 204 4e-51 UniRef50_D1BN08 Type II secretion system protein E n=3 Tax=Veill... 202 1e-50 UniRef50_B9XSZ5 Type II secretion system protein E n=1 Tax=bacte... 202 1e-50 UniRef50_C8NB70 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 201 2e-50 UniRef50_A5EV69 Twitching motility protein PilU n=1 Tax=Dichelob... 201 2e-50 UniRef50_A9LZU9 Twitching motility protein PilU n=30 Tax=Neisser... 200 5e-50 UniRef50_C9LPW1 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 199 1e-49 UniRef50_D1KBX3 Tfp pilus assembly protein PilT (Fragment) n=1 T... 198 2e-49 UniRef50_UPI0001BC5494 hypothetical protein F3_04365 n=4 Tax=Fus... 198 3e-49 UniRef50_C1XRI8 Pilus retraction protein PilT n=2 Tax=Meiothermu... 197 6e-49 UniRef50_C6NZC5 Twitching motility protein n=1 Tax=Sideroxydans ... 196 6e-49 UniRef50_C5V2P0 Twitching motility protein n=1 Tax=Gallionella f... 194 2e-48 UniRef50_D2L7F7 Type II secretion system protein E n=1 Tax=Desul... 190 5e-47 UniRef50_B8HI64 Twitching motility protein n=1 Tax=Arthrobacter ... 184 5e-45 UniRef50_A9EXH6 Putative twitching motility protein PilT n=1 Tax... 182 1e-44 UniRef50_Q0F284 Pilus retraction protein PilT n=1 Tax=Mariprofun... 176 8e-43 UniRef50_C4XIZ5 Putative twitching mobility protein n=1 Tax=Desu... 170 8e-41 UniRef50_C6XET7 Type II secretion system protein E n=1 Tax=Methy... 167 5e-40 UniRef50_B8HI52 Type II secretion system protein E n=1 Tax=Arthr... 163 7e-39 UniRef50_Q2S330 Twitching motility protein PilT n=2 Tax=Rhodothe... 162 2e-38 UniRef50_UPI0001744C3D twitching motility protein PilT n=1 Tax=V... 160 8e-38 UniRef50_UPI0001744D67 twitching motility protein n=1 Tax=Verruc... 157 5e-37 UniRef50_Q11ZJ5 Type II secretion system protein E n=2 Tax=Polar... 151 3e-35 UniRef50_C4K520 TraJ conjugal transfer protein n=9 Tax=Gammaprot... 148 3e-34 UniRef50_Q5ZS43 DotB n=16 Tax=Legionellales RepID=Q5ZS43_LEGPH 145 2e-33 UniRef50_A3NLN2 Twitching motility protein PilT n=37 Tax=Burkhol... 145 2e-33 UniRef50_A3E238 Type IV pili twitching motility protein n=1 Tax=... 140 7e-32 UniRef50_C7SA62 TraJ protein n=11 Tax=root RepID=C7SA62_ECOLX 140 7e-32 UniRef50_C4XH26 General secretion pathway protein E n=1 Tax=Desu... 140 8e-32 UniRef50_B4U8F8 Type II secretion system protein E n=1 Tax=Hydro... 139 2e-31 UniRef50_A8ZWZ6 General secretory pathway protein E n=2 Tax=Delt... 139 2e-31 UniRef50_A7GEM1 General secretion pathway protein E n=10 Tax=Clo... 139 2e-31 UniRef50_A3EUR7 Putative defect in organelle trafficking protein... 138 2e-31 UniRef50_Q7BQX3 TraJ n=1 Tax=Serratia entomophila RepID=Q7BQX3_9... 138 3e-31 UniRef50_Q1YQV4 Putative general secretion pathway protein E n=1... 136 9e-31 UniRef50_Q21PW7 Type II secretion system protein E n=1 Tax=Rhodo... 134 3e-30 UniRef50_A7HJC2 Type II secretion system protein E n=11 Tax=Ther... 134 3e-30 UniRef50_A8ZYV7 Type II secretion system protein E n=11 Tax=Delt... 134 4e-30 UniRef50_A2SNL4 Pili biogenesis ATPase n=1 Tax=Methylibium petro... 134 4e-30 UniRef50_Q68JB4 TraJ n=6 Tax=Escherichia coli RepID=Q68JB4_ECOLX 134 6e-30 UniRef50_A6Q683 Type II secretion system protein E n=3 Tax=Epsil... 133 1e-29 UniRef50_Q181B0 Type IV pilus assembly protein n=5 Tax=Clostridi... 132 1e-29 UniRef50_A8FXR0 General secretion pathway protein E n=2 Tax=Alte... 132 2e-29 UniRef50_A6DJN8 General secretory pathway protein E n=1 Tax=Lent... 132 2e-29 UniRef50_A4JW54 Plasmid transfer ATPase TraJ n=1 Tax=Burkholderi... 132 2e-29 UniRef50_B8CZA0 Type II secretion system protein E n=1 Tax=Halot... 131 3e-29 UniRef50_A9F277 General secretion pathway protein E n=1 Tax=Sora... 131 3e-29 UniRef50_B2ULL9 Type II secretion system protein E n=2 Tax=Verru... 131 3e-29 UniRef50_B8D2C7 Tfp pilus assembly protein PilB n=5 Tax=Firmicut... 131 3e-29 UniRef50_B2A563 Type II secretion system protein E n=5 Tax=cellu... 131 4e-29 UniRef50_Q3SKS0 Pilus assembly pathway ATPase PilB n=3 Tax=Prote... 130 6e-29 UniRef50_Q82V45 Bacterial type II secretion system protein E n=1... 130 6e-29 UniRef50_B8FQ85 Type II secretion system protein E n=2 Tax=Desul... 130 6e-29 UniRef50_B9JMG1 Pilus assembly secretion ATP-binding protein n=1... 130 8e-29 UniRef50_C6I0X0 Putative defect in organelle trafficking protein... 130 8e-29 UniRef50_Q3C097 Putative DotB-like type IV secretion system prot... 129 1e-28 UniRef50_B3PF17 General secretion pathway protein E n=8 Tax=Prot... 129 1e-28 UniRef50_D1P420 Protein transport protein HofB n=5 Tax=Enterobac... 129 2e-28 UniRef50_B5YDI2 Type IV pilus assembly protein PilB n=20 Tax=Bac... 129 2e-28 UniRef50_A6M148 Type II secretion system protein E n=18 Tax=Clos... 129 2e-28 UniRef50_B1I3E7 Type II secretion system protein E n=4 Tax=Clost... 128 2e-28 UniRef50_A4XWG4 General secretory pathway protein E n=4 Tax=Bact... 128 3e-28 UniRef50_A3CR73 PilB-like pili biogenesis ATPase, putative n=2 T... 127 4e-28 UniRef50_D1N174 Type II secretion system protein E n=1 Tax=Victi... 127 4e-28 UniRef50_C8W151 Type II secretion system protein E n=1 Tax=Desul... 127 4e-28 UniRef50_A0Q077 General secretion pathway protein E n=3 Tax=Clos... 127 5e-28 UniRef50_A3UGZ5 Probable type II secretion protein n=2 Tax=Prote... 127 6e-28 UniRef50_D1B5J6 Type II secretion system protein E n=3 Tax=Syner... 127 6e-28 UniRef50_Q5WF17 Late competence protein ComGA n=1 Tax=Bacillus c... 127 8e-28 UniRef50_B0MCL3 Putative uncharacterized protein n=1 Tax=Anaeros... 127 8e-28 UniRef50_C3MFK5 General secretion pathway protein E, GspE n=1 Ta... 126 1e-27 UniRef50_Q15ZI3 Type II secretion system protein E n=119 Tax=Pro... 126 1e-27 UniRef50_C1SHL1 Type II secretory pathway, ATPase PulE/Tfp pilus... 126 1e-27 UniRef50_B1ZUM1 Type II secretion system protein E n=1 Tax=Opitu... 126 1e-27 UniRef50_A9AU04 Twitching motility protein n=1 Tax=Burkholderia ... 125 1e-27 UniRef50_Q1Q109 Strongly similar to general secretory system typ... 125 1e-27 UniRef50_A7BSG5 Bacterial type II secretion system protein E n=1... 125 2e-27 UniRef50_A6DAK8 Putative type ii protein secretion e n=1 Tax=Cam... 125 2e-27 UniRef50_A3WNH5 Type II secretory pathway, ATPase PulE n=1 Tax=I... 125 2e-27 UniRef50_C6BWY7 Type II secretion system protein E n=1 Tax=Desul... 125 2e-27 UniRef50_A1TQP6 Type II secretion system protein E n=1 Tax=Acido... 125 2e-27 UniRef50_A5KT43 Type II secretion system protein E n=6 Tax=candi... 125 2e-27 UniRef50_P45759 Probable general secretion pathway protein E n=3... 125 2e-27 UniRef50_C0A4E0 Type II secretion system protein E n=2 Tax=Chlam... 125 2e-27 UniRef50_Q48JN2 General secretion pathway protein GspE n=3 Tax=P... 125 2e-27 UniRef50_C0GQP1 Type II secretion system protein E n=1 Tax=Desul... 125 3e-27 UniRef50_B7APV7 Putative uncharacterized protein n=2 Tax=Bacteri... 125 3e-27 UniRef50_UPI00016B268C type II secretion system protein E n=1 Ta... 124 3e-27 UniRef50_C4L4L3 Type II secretion system protein E n=1 Tax=Exigu... 124 4e-27 UniRef50_UPI0001BC5ABC type IV-A pilus assembly ATPase PilB n=2 ... 124 4e-27 UniRef50_B0S8Q3 Type II secretory pathway ATPase, protein E n=7 ... 124 4e-27 UniRef50_A8MGF8 Type II secretion system protein E n=1 Tax=Alkal... 124 5e-27 UniRef50_A4J3A4 Type II secretion system protein E n=1 Tax=Desul... 124 5e-27 UniRef50_B9XRT3 Type II secretion system protein E n=2 Tax=Verru... 124 5e-27 UniRef50_B8FQB2 Type II secretion system protein E n=4 Tax=Clost... 124 5e-27 UniRef50_B5Y9C5 General secretion pathway protein E n=1 Tax=Copr... 124 5e-27 UniRef50_Q2LUW6 General secretion pathway protein E n=1 Tax=Synt... 124 5e-27 UniRef50_A6GM82 Type II secretion system protein E:General secre... 124 5e-27 UniRef50_Q00512 General secretion pathway protein E n=10 Tax=Pro... 124 6e-27 UniRef50_C8X3E6 Type II secretion system protein E n=2 Tax=Desul... 124 6e-27 UniRef50_P25953 ComG operon protein 1 n=34 Tax=Bacillaceae RepID... 124 6e-27 UniRef50_B4D852 Type II secretion system protein E n=1 Tax=Chtho... 123 7e-27 UniRef50_B1YJT8 Type II secretion system protein E n=5 Tax=Bacil... 123 7e-27 UniRef50_B9XM22 Type II secretion system protein E n=1 Tax=bacte... 123 7e-27 UniRef50_Q5NX46 Predicted GSPII_E, Type II/IV secretion system p... 123 8e-27 UniRef50_Q0AZI9 Type II secretion system protein E n=1 Tax=Syntr... 123 9e-27 UniRef50_B4U620 Type II secretion system protein E n=3 Tax=Aquif... 123 1e-26 UniRef50_D2R471 Type II secretion system protein E n=6 Tax=Planc... 122 1e-26 UniRef50_C8WIR5 Type II secretion system protein E n=2 Tax=Bacte... 122 1e-26 UniRef50_Q1Q110 Strongly similar to general secretory system typ... 122 1e-26 UniRef50_A8URM8 Putative uncharacterized protein n=3 Tax=Hydroge... 122 1e-26 UniRef50_Q1D9E1 General secretory pathway protein E n=17 Tax=Pro... 122 1e-26 UniRef50_P31703 General secretion pathway protein E n=26 Tax=Pro... 122 1e-26 UniRef50_B1HSP4 ComG operon protein 1 n=2 Tax=Bacillaceae RepID=... 122 1e-26 UniRef50_C6CY56 Type II secretion system protein E n=3 Tax=Bacil... 122 1e-26 UniRef50_Q988B0 General secretion protein E n=1 Tax=Mesorhizobiu... 122 2e-26 UniRef50_B0T702 General secretory pathway protein E n=1 Tax=Caul... 122 2e-26 UniRef50_A6W755 Type II secretion system protein E n=3 Tax=Actin... 122 2e-26 UniRef50_Q7UE44 General secretion pathway protein E n=1 Tax=Rhod... 122 2e-26 UniRef50_D1KAN6 Type II secretory ATPase PilB n=1 Tax=uncultured... 122 3e-26 UniRef50_A7IH58 Type II secretion system protein E n=10 Tax=Rhiz... 122 3e-26 UniRef50_B6J5I2 Type 4 pili biogenesis protein (Nuleotide-bindin... 121 3e-26 UniRef50_C6Y3P1 Type II secretion system protein E n=2 Tax=Sphin... 121 3e-26 UniRef50_D2QZA7 Type II secretion system protein E n=1 Tax=Pirel... 121 3e-26 UniRef50_B8FE33 General secretory pathway protein E n=2 Tax=Desu... 121 3e-26 UniRef50_B0TEE9 Type ii secretion system protein e, putative n=1... 121 3e-26 UniRef50_Q1CWD4 Type II secretion system protein, GspE family n=... 121 3e-26 UniRef50_Q01NU4 Type II secretion system protein E (GspE) n=1 Ta... 121 4e-26 UniRef50_A0K2T8 General secretory pathway protein E n=91 Tax=cel... 121 4e-26 UniRef50_P31742 General secretion pathway protein E n=23 Tax=Gam... 121 4e-26 UniRef50_B2IL31 Type II secretion system protein E n=1 Tax=Beije... 121 4e-26 UniRef50_A7NBK0 Type II secretion system protein/type IV-A pilus... 120 5e-26 UniRef50_A9GDR9 General secretion pathway protein E n=1 Tax=Sora... 120 5e-26 >UniRef50_P52052 Uncharacterized protein yggR n=137 Tax=Enterobacteriaceae RepID=YGGR_ECOLI Length = 326 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/326 (100%), Positives = 326/326 (100%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL Sbjct: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN Sbjct: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM Sbjct: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS Sbjct: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH Sbjct: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 Query: 301 VIQTGQQVGMITFQQSYQHRVGEGRL 326 VIQTGQQVGMITFQQSYQHRVGEGRL Sbjct: 301 VIQTGQQVGMITFQQSYQHRVGEGRL 326 >UniRef50_B6VP33 YggR protein (Fragment) n=1 Tax=Escherichia coli RepID=B6VP33_ECOLX Length = 168 Score = 330 bits (846), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 160/163 (98%), Positives = 160/163 (98%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD PDVEELLREWLDDDQRAIL Sbjct: 6 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDAPDVEELLREWLDDDQRAIL 65 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 LENGQLDFAVSLAENQRLRGSAFAQR GISLALRLLPSHCPQLEQLGAP VLPELLKSEN Sbjct: 66 LENGQLDFAVSLAENQRLRGSAFAQRQGISLALRLLPSHCPQLEQLGAPPVLPELLKSEN 125 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY 163 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY Sbjct: 126 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY 168 >UniRef50_C2LMJ4 Tfp pilus assembly protein PilT n=2 Tax=Proteus mirabilis RepID=C2LMJ4_PROMI Length = 339 Score = 319 bits (818), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 169/331 (51%), Positives = 223/331 (67%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM----EAAPFDTPDVEELLREWLDDDQ 56 MNME+++ SVKHN SDLHLC R RI G + + P + + + + +L Q Sbjct: 1 MNMEKLIIYSVKHNASDLHLCCGDVPRLRINGVLYQQNQCKPITSDTLLKWITPYLTTAQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + GQ+D A++LAE QRLR + F Q+ GIS LR++ S P L L P + LL Sbjct: 61 LQFFGKEGQVDTAITLAEGQRLRVNLFRQQLGISAVLRVINSQLPALTSLRVPKSITALL 120 Query: 117 KS-ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + NGLILVTGATGSGKS+TLAAM+ YLNQH HILTLE P+E++Y +++ +IQQREI Sbjct: 121 DNVSNGLILVTGATGSGKSSTLAAMIDYLNQHKRQHILTLEAPIEFIYTNKQSIIQQREI 180 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G AS + AALR+DPDVI+LGELRD E+I++AL AAETGHLVLATLHT+G Q +E Sbjct: 181 GRDVQNIASAIEAALRQDPDVIMLGELRDLESIKMALIAAETGHLVLATLHTQGVVQTLE 240 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R+ + F + E+ + QLAGSL+A++SQ+L Q GRVALFE++ T + +LIREGK Sbjct: 241 RVTNVFSSNERQWISAQLAGSLKAIISQQLVPATQGGRVALFEVMYMTQGIAHLIREGKY 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ ++QTG + GM TF S Q R EG L Sbjct: 301 HQVTTLMQTGFEYGMQTFTLSRQQRQYEGLL 331 >UniRef50_C8WRG4 Twitching motility protein n=5 Tax=Bacteria RepID=C8WRG4_ALIAD Length = 347 Score = 305 bits (782), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 156/329 (47%), Positives = 222/329 (67%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME--AAPFDTPDVEELLREWLDDDQRA 58 + ++EI+AL+ + SD+HL + P +R+ G +E + D+E R+ L +++ Sbjct: 2 VQIDEILALAKEKEASDVHLSAGAPVTYRVHGDLEPMGSKLMPVDLEAFARQMLSEERWQ 61 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +E G++DF+ S+ R R +A+ QR IS+A RL+P P +E+L P+V L+ Sbjct: 62 RFMEAGEIDFSYSIPGVARFRVNAYRQRGSISIAARLIPQRIPTMEELNLPSVFKALMNR 121 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAA++ +NQ HI+TLEDP+EYL+ + +I QREIG Sbjct: 122 PYGLVLVTGPTGSGKSTTLAAVLDAINQTQRRHIITLEDPIEYLHTHKLSIIDQREIGQD 181 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 FA LRAALR+DPD++L+GE+RD ETI A+TA+ETGHLV ATLHT A Q VER++ Sbjct: 182 TSGFAPALRAALRQDPDILLVGEMRDLETIATAITASETGHLVFATLHTSDAVQTVERII 241 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQ 297 D FP +++ +R QLAG L V+SQ+L + GRVA FE+L+NTPAV NLIR GKTHQ Sbjct: 242 DVFPPEQQGQIRIQLAGVLAGVVSQRLHRTRDGRGRVASFEVLVNTPAVANLIRSGKTHQ 301 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++QTG+Q GMIT + S + V +G++ Sbjct: 302 IGAMMQTGRQFGMITMEMSIRELVQQGKI 330 >UniRef50_B5YDI3 Type IV pilus retraction protein PilT n=96 Tax=Bacteria RepID=B5YDI3_DICT6 Length = 360 Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 152/329 (46%), Positives = 219/329 (66%), Gaps = 5/329 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVE-ELLREWLDDDQ 56 +++ EI+ +++ SD+H+ S P +RI+G + P TP + L+ L ++Q Sbjct: 5 LSIIEILQSALQKEASDVHITSGIPPVFRIKGHLIPQTQYPTLTPQLTYRLIFSLLTEEQ 64 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + L EN +LDF+V ++ R R +AF QR ++ RL+P P +E+L P VL +L Sbjct: 65 KQKLQENKELDFSVGISGEGRFRVNAFWQRGSLAAVFRLIPWKIPTIEELRLPLVLKDLA 124 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GLILVTG TGSGKSTTLA+M+ Y+N + HI+T+EDP+EYL+ ++ ++ QRE+G Sbjct: 125 ALPRGLILVTGPTGSGKSTTLASMIDYINSNFSRHIITIEDPIEYLHTHKKSIVNQREVG 184 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ LR+ALREDPDVIL+GE+RD ET +A+TAAETGHLV+ATLHT A Q++ER Sbjct: 185 SDTYSFANALRSALREDPDVILVGEMRDLETTAIAITAAETGHLVMATLHTVDAVQSIER 244 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKT 295 +VD FPA ++ +R QL+G ++ ++SQ+L K GR+ E+LI PAV +LIREGKT Sbjct: 245 IVDQFPAHQQQQIRLQLSGVIQGIISQQLLPRKDGTGRIVATEILIGIPAVRSLIREGKT 304 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 Q+ VIQTG + GM T QS V +G Sbjct: 305 PQIYSVIQTGGRYGMQTMDQSLADLVKKG 333 >UniRef50_P24559 Twitching mobility protein n=63 Tax=Bacteria RepID=PILT_PSEAE Length = 344 Score = 286 bits (732), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 151/327 (46%), Positives = 205/327 (62%), Gaps = 3/327 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 M++ E++A S K SDLHL + P R+ G R+ P + V L+ + ++D QR Sbjct: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E + DF+ + R R +AF Q G R +PS +E+LG V + Sbjct: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ YLN HILT+EDP+E+++ S++CL+ QRE+ Sbjct: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 + F+ LR+ALREDPD+IL+GE+RD ETIRLALTAAETGHLV TLHT AA+ ++R+ Sbjct: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VD FPA+EK VR+ L+ SL++V+SQ L GRVA E++I TPA+ NLIRE K Q Sbjct: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEG 324 + IQTG +GM T + V +G Sbjct: 301 MYSAIQTGGSLGMQTLDMCLKGLVAKG 327 >UniRef50_A5EV68 Twitching motility protein PilT n=4 Tax=Proteobacteria RepID=A5EV68_DICNV Length = 357 Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 147/329 (44%), Positives = 205/329 (62%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 + +++++ + K SDLHL P RI G R+ P + +++ + D Q Sbjct: 13 LKLDDLLRFAQKQGASDLHLSCGVPPMIRIDGDVRRLNLPPLQNQQMRDMIFGIMTDAQM 72 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E + DF+ + R R + F Q G+ + R +PS LE L AP +++ Sbjct: 73 KSFEEKWEADFSTEIRGVSRFRVNVFQQNRGMGIVFRTIPSKVLSLEDLKAPAKFVDIID 132 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ ++N + HILT+EDP+E+++ S++CL+ QRE+ Sbjct: 133 VPRGLVLVTGPTGSGKSTTLAAMIDHINNNRHEHILTVEDPIEFVHESKKCLVNQREVHR 192 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +F++ LRAALREDPD+IL+GELRD ETIRLALTAAETGHLV TLHT AA+ ++R+ Sbjct: 193 DTQSFSNALRAALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI 252 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 +D FP +EK VR+ L+ SLRAV++Q L GRVA E+L+ T AV NLIRE K Q Sbjct: 253 IDVFPGEEKQLVRSMLSESLRAVIAQTLLKKIGGGRVAAHEVLVGTSAVKNLIREDKVAQ 312 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + IQTG Q GM T Q+ V EG++ Sbjct: 313 IYSTIQTGSQYGMQTLDQALSALVKEGKV 341 >UniRef50_C9RU77 Twitching motility protein n=5 Tax=Bacilli RepID=C9RU77_GEOSY Length = 351 Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/329 (44%), Positives = 213/329 (64%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRA 58 +E ++ + + SD+HL P +R+ G + A + + E++ + + Sbjct: 4 KLEALLRAAFECRASDVHLTVGAPPIFRVNGELRAYGHERLHPEETEQMAKAVIPAPLWQ 63 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 E G+LDF+ +A R R + F QR +SLA+RL+P P LE+LG P VL + + Sbjct: 64 QFQETGELDFSYGIAGVSRFRLNVFKQRSCVSLAVRLIPVRIPTLEELGLPDVLKRIAEK 123 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 +GL+LVTG TGSGKSTTLAAM+ Y+N+ HI+TLEDP+EYL+ + +I QRE+G Sbjct: 124 PHGLVLVTGPTGSGKSTTLAAMIDYMNKTMSKHIITLEDPIEYLHKHGKSIIDQREVGFD 183 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA+GLRAALR+DPDVIL+GE+RD ETI+ A+TAAETGHLVL TLHT A A+ER++ Sbjct: 184 TGSFAAGLRAALRQDPDVILVGEMRDLETIQTAITAAETGHLVLGTLHTASAPAAIERMI 243 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP ++ +R QLA L A+++Q+L ++ + GR A E+L+N AV NLIR K HQ Sbjct: 244 DVFPPAQQAQIRLQLASVLVAIIAQRLFPNRHKTGRTAALEILVNNAAVANLIRNEKEHQ 303 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +++QT + +GM T + S + +GR+ Sbjct: 304 IINIMQTSRSIGMQTMEMSVKELAADGRI 332 >UniRef50_Q06581 Twitching motility protein n=117 Tax=Bacteria RepID=PILT_NEIGO Length = 374 Score = 281 bits (718), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 146/283 (51%), Positives = 195/283 (68%), Gaps = 1/283 (0%) Query: 43 DVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ 102 +V ++ ++D QR I +N ++DF+ L R R +AF G + R +PS Sbjct: 73 EVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPSTVLS 132 Query: 103 LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYL 162 LE+L AP++ ++ +S G++LVTG TGSGKSTTLAAM+ Y+N+ AHILT+EDP+E++ Sbjct: 133 LEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIEDPIEFV 192 Query: 163 YASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVL 222 + S++ LI QRE+ H ++FA+ L +ALREDPDVIL+GE+RD ETI LALTAAETGHLV Sbjct: 193 HQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAAETGHLVF 252 Query: 223 ATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLI 281 TLHT GAA+ V+R+VD FPA EK+ VR+ L+ SL AV+SQ L+ GRVA E+LI Sbjct: 253 GTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNGRVASHEILI 312 Query: 282 NTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 PAV NLIRE K Q+ V+QTGQ GM T QS Q V +G Sbjct: 313 ANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQG 355 >UniRef50_Q2JJR9 Twitching motility protein n=60 Tax=Bacteria RepID=Q2JJR9_SYNJB Length = 376 Score = 276 bits (707), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 146/332 (43%), Positives = 213/332 (64%), Gaps = 8/332 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +E+++ V+ SD+H+ + P +RI G +E P +V+ L+ L+++QR Sbjct: 2 IEDLMEAIVQKGGSDIHISAGLPPYFRINGHLEPTEHEPLSAEEVQRLIFSMLNNNQRKQ 61 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L +N +LD + + R R + + R + A+R L S P +++LG P V E + Sbjct: 62 LEQNWELDCSYGVRGIGRFRVNVYRDRGTYACAMRALASEIPNIDKLGLPDVCKEAARLP 121 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLA+M+ +N+ HILT+EDP+EY+Y R +I QR++G Sbjct: 122 RGLVLVTGPTGSGKSTTLASMIDMINRERAEHILTIEDPIEYIYTPIRSIIHQRQLGEDT 181 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+ LRAA+REDPDVIL+GE+RD ETI+LA+TAAETGHL AT+HT AAQ V+RLVD Sbjct: 182 KSFANALRAAMREDPDVILIGEMRDLETIQLAITAAETGHLCFATVHTSSAAQTVDRLVD 241 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKL-----EVDKQEGRVALFELLINTPAVGNLIREGK 294 FP +++ +R QL+ SL+AV SQ L + GRV + E+++ TPA+ NLIREGK Sbjct: 242 VFPPEQQQQIRVQLSNSLKAVFSQTLARRLNPKPGEPGRVLVQEIMVVTPAIANLIREGK 301 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 T Q+ IQTG + GM T +Q + +G++ Sbjct: 302 TAQIYSAIQTGGKQGMKTLEQDLANLYLQGKI 333 >UniRef50_B8D2C8 Tfp pilus assembly protein, pilus retraction ATPase PilT n=16 Tax=Firmicutes RepID=B8D2C8_HALOH Length = 360 Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 148/320 (46%), Positives = 213/320 (66%), Gaps = 7/320 (2%) Query: 1 MNMEEIVALSVK-HNVSDLHLCSAWPARWRIRGRME-----AAPFDTPDVEELLREWLDD 54 M+++E + V+ ++SDLHL R G+++ + D++ + +E + D Sbjct: 4 MDIKEFLKKFVEDQHISDLHLTVNSKPVVRYDGKLKVFEEFSGRIGFEDMQNITKELMTD 63 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 DQ E G+LDF+ S+ R R +A+ QR I+LALR++P+ P +E+LG P +L Sbjct: 64 DQWQQFQEKGELDFSYSVPGFSRFRVNAYYQRGAIALALRIIPTKIPTIEELGLPQILKN 123 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L GL L TG TGSGK+TTLA+M+ +N++ AHILTLEDP+EYL+ + ++ QRE Sbjct: 124 LALMRKGLFLCTGPTGSGKTTTLASMINIINKNRQAHILTLEDPIEYLHRHNKSIVHQRE 183 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +G+ +F GLR+ALR+DPDVIL+GE+RD ETI +AL AAETGHLVLATLHT A Q + Sbjct: 184 VGIDTTSFKEGLRSALRQDPDVILVGEMRDHETISIALEAAETGHLVLATLHTNDAPQTI 243 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREG 293 +R++D FP Q++ VR QL+ +L ++SQ+L K GR+A E+LI TPAV N+IR+G Sbjct: 244 DRIIDVFPPQQQRQVRVQLSLTLNGIVSQQLLPRKDGNGRIAALEVLIGTPAVRNVIRDG 303 Query: 294 KTHQLPHVIQTGQQVGMITF 313 K+HQL +QTG + GMIT Sbjct: 304 KSHQLYSSMQTGGKYGMITM 323 >UniRef50_B2ULW6 Twitching motility protein n=4 Tax=Chlamydiae/Verrucomicrobia group RepID=B2ULW6_AKKM8 Length = 364 Score = 273 bits (699), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 138/299 (46%), Positives = 196/299 (65%), Gaps = 4/299 (1%) Query: 16 SDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLHL P + R+ G + A + + LL E D LE G LDFA + Sbjct: 17 SDLHLSEGQPPKVRVNGTISAISDENLEGQAFKNLLAEICDPQAFQKYLEEGDLDFAYEM 76 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSG 132 E R R + F Q+HG+ RL+P+ LE+LG PTV+ E +GL+LVTG TGSG Sbjct: 77 DETSRFRCNYFKQQHGLGAVFRLIPTKIATLEELGVPTVVKEFAHMRSGLVLVTGPTGSG 136 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 KSTTLAA++ Y+N + HI+T+E+P+E+++ +++ ++ QRE+ L +FA GLRA+LRE Sbjct: 137 KSTTLAAIIDYINSNQARHIITVEEPIEFVHPNKKSIVTQREVPLQTPSFADGLRASLRE 196 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 D D++L+GE+RD ETI LALTAAETG LV TLHT A++ ++R++D FP+ ++ VR Sbjct: 197 DSDIVLVGEMRDLETISLALTAAETGLLVFGTLHTNNASKTIDRIIDVFPSDQQSQVRTM 256 Query: 253 LAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 LAGSLR V++Q L + + GRVA+ E+L TPAV +IREG T ++P VI G+ +GM Sbjct: 257 LAGSLRGVVAQLLMKRSDKPGRVAVNEILFATPAVAAIIREGATQKIPDVIVGGKAMGM 315 >UniRef50_B1I3G0 Twitching motility protein n=29 Tax=Firmicutes RepID=B1I3G0_DESAP Length = 372 Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 210/332 (63%), Gaps = 8/332 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTP-----DVEELLREWLDDD 55 ++ + ++ ++V+ SDLHL + P RI G E P D P D+E+L+ L+ Sbjct: 11 IDFDTLLRITVERQGSDLHLTAGLPPVVRIHG--ELVPLDYPPLKPSDIEQLVLPRLEPS 68 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 RAIL E +LDF+ S+A R RG+ QR S LR++P P LE+LG P + L Sbjct: 69 YRAILDEKWELDFSYSVAGVSRFRGNIMRQRGSYSAVLRVVPYKAPALEELGLPPAVRNL 128 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 GL+LVTG TGSGKSTTLAAM+ +N+ +++T+EDP+E+L+ + +++QRE+ Sbjct: 129 CFLPRGLVLVTGPTGSGKSTTLAAMIDLINRERRVNVVTVEDPIEFLHRHNKAIVRQREV 188 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +FA LR LR DPDVIL+GE+RD E+I +ALTAAETGHLV +TLHT+ A + Sbjct: 189 GSDTRSFADALRHVLRADPDVILIGEMRDLESIAIALTAAETGHLVFSTLHTQTAPLTIH 248 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGK 294 R+VD F ++D +R QLA SL+ V++Q+L +GRVA EL++ +PAV LIREGK Sbjct: 249 RIVDVFQEHQRDQIRQQLADSLQGVIAQQLVPRADGKGRVAAVELMLASPAVRALIREGK 308 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ VIQT +Q GM T Q+ G++ Sbjct: 309 EHQMYSVIQTSRQQGMQTMDQALAELYTAGKI 340 >UniRef50_B2ULW5 Twitching motility protein n=17 Tax=cellular organisms RepID=B2ULW5_AKKM8 Length = 360 Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 153/327 (46%), Positives = 211/327 (64%), Gaps = 14/327 (4%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRM----EAAPFDTP-DVEELLREWLDDDQRAILL 61 + L ++ SD+HL WR G++ E AP TP D E L R +L+D + L Sbjct: 13 LKLGQDYDCSDIHLAVNSRPTWRRFGQLLPIWEEAPNLTPQDTEVLARGFLEDPEWNRLQ 72 Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT--VLPELLKSE 119 + G +DFA + + R R S QR G + R++ + +E++G PT V+P L + Sbjct: 73 QRGDVDFAYA-NDFGRYRASVVKQRLGYDICFRIINTRVRTMEEIGLPTEYVVP-LTRYT 130 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 NGLILVTG+ GSGKSTTLA++V ++NQ HI+TLEDP+EYL S+ C + QRE+ H Sbjct: 131 NGLILVTGSVGSGKSTTLASIVDFINQDRHDHIITLEDPIEYLIPSKNCHVNQREVHKHT 190 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA LR ALREDPDVI++GE+RD ETI LALTAAETGHLVL TLHT AA+ V+R++D Sbjct: 191 ESFARALRGALREDPDVIMVGEMRDLETISLALTAAETGHLVLGTLHTGSAARTVDRVLD 250 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE--GRVALFELLINTPAVGNLIREGKTHQ 297 FP +++D +R ++ SLR ++SQ+L V + + GR E+L+NTPA+ N IREGKT Sbjct: 251 VFPVEQRDQIRIMVSESLRGIISQQL-VPRADGNGRALAIEMLVNTPAIANCIREGKTFM 309 Query: 298 LPHVIQTGQQVGMITFQQSYQ--HRVG 322 +P IQTG+ GMI S + H+ G Sbjct: 310 IPGCIQTGKAQGMILMDDSLRALHQAG 336 >UniRef50_Q1J1R7 Tfp pilus assembly protein, pilus retraction ATPase PilT n=22 Tax=Bacteria RepID=Q1J1R7_DEIGD Length = 403 Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/317 (43%), Positives = 209/317 (65%), Gaps = 6/317 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQRA 58 ++ +I+ + + SD+ L + P ++++ G E AP D +L+ +++ Q+ Sbjct: 7 DITDILRFAAEKGASDVILTAGLPPQFKLSGVYETHGFAPLAATDTRKLMYSMMNERQQR 66 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 I E +LDF+ +L E R R +AF QR + LRL+P+ +++G P + E+ + Sbjct: 67 IFEEKRELDFSFALGERARFRVNAFMQRGFVGGVLRLIPTQIRSAQEMGLPPHVIEIANA 126 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAM+ Y+N HI+T+EDP+E+++ ++ ++ QRE+G Sbjct: 127 PRGLVLVTGPTGSGKSTTLAAMIDYINSTKKLHIVTIEDPIEFMHGHKQSIVNQREVGSD 186 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++F LRAALR+ PDVIL+GE+RD ETIR A+TAAETGHLV+ TLHT A ++++R+V Sbjct: 187 TLSFQDALRAALRQAPDVILVGEMRDYETIRAAVTAAETGHLVMGTLHTNSAPESIDRIV 246 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKL--EVDKQEGRVALFELLINTPAVGNLIREGKTH 296 D FP +++ +R QLA +L AV++Q+L +D GRV +ELLI PAV LIREGKT+ Sbjct: 247 DVFPEEQQGQIRVQLANNLVAVMTQQLLPRLDGL-GRVLAYELLIANPAVRALIREGKTY 305 Query: 297 QLPHVIQTGQQVGMITF 313 Q+ +QTG + GM+T Sbjct: 306 QIVSTMQTGAREGMVTM 322 >UniRef50_Q3Z802 Twitching mobility protein n=13 Tax=Bacteria RepID=Q3Z802_DEHE1 Length = 363 Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 204/322 (63%), Gaps = 7/322 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTP-----DVEELLREWLDDD 55 M +E++ ++V+ SDLHL P RI G ++ D P +E++L E + Sbjct: 1 MRADELLKIAVEKKASDLHLRVPNPPVLRIDGALKPQT-DWPVLYNKAIEQILEEITTPE 59 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 QR I +LDFA S+A R R + QR IS+A R +P +++LG P + EL Sbjct: 60 QREIFYAEKELDFAYSVAGVARFRVNVMKQRGSISIAFRQVPFEIRSIDELGVPKICKEL 119 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + GLILVTG TGSGKSTT+AAMV +LN +++T+EDP+EYLY + RC+I QR++ Sbjct: 120 ILKPRGLILVTGPTGSGKSTTMAAMVDHLNNTDSRNVITIEDPIEYLYTNNRCIIAQRDL 179 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +F++ L+ ALR DPDVIL+GE+RD ETI A++AAETGHLV+ TLHT A Q ++ Sbjct: 180 GDDTKSFSTALKYALRHDPDVILVGEMRDLETISTAISAAETGHLVVGTLHTTDAPQTID 239 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGK 294 RL+D FP ++ +R QL+ + AVL Q L ++ +GRVA FE+++ AV NLIR+ K Sbjct: 240 RLIDIFPPDQQQQIRMQLSLVIEAVLVQTLLPKREGKGRVAAFEIMVANTAVRNLIRDKK 299 Query: 295 THQLPHVIQTGQQVGMITFQQS 316 H+L +V+Q + GM T QS Sbjct: 300 AHELHNVMQLSAKDGMQTLDQS 321 >UniRef50_Q1K4H3 Twitching motility protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K4H3_DESAC Length = 481 Score = 266 bits (680), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 204/329 (62%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRA 58 +E+ ++ + + SDLH+ + P R G +E PF + E LL LD DQR+ Sbjct: 127 TLEDYLSFARRQGASDLHINAGSPPLLRKDGVLMTLEREPFTAQETEALLFSALDGDQRS 186 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +L E LD + R R Q G A R++ P EQL P L +L + Sbjct: 187 LLYEQLALDTCCEFSGLGRYRTCFAKQSRGWDGAFRIVDQTIPTFEQLQLPMHLKQLTEY 246 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LV G GSGK+TTLAAM+ +NQH + HI+T+EDP+EY+++++ I QR++G H Sbjct: 247 HQGLVLVAGPAGSGKTTTLAAMIQLINQHREDHIITMEDPIEYVHSAEMSHISQRQVGDH 306 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 M+F++ LRAALREDPDVI++GELRD ET LA++AAETGHLV A+LHT GAAQ + R++ Sbjct: 307 TMSFSAALRAALREDPDVIMIGELRDRETATLAISAAETGHLVFASLHTTGAAQTISRIL 366 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQ 297 D FPA ++ VR+ ++ S+R ++ Q+L K+ EGRV E++ N A+GNLIRE + Q Sbjct: 367 DFFPADQQGQVRSMISESIRGIVCQRLMPRKEGEGRVLALEIMYNNTAIGNLIREDRMFQ 426 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 LP ++Q + GM + S Q V E ++ Sbjct: 427 LPTMMQINRDKGMCQLEDSLQTLVQEEQI 455 >UniRef50_B8FGS0 Twitching motility protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGS0_DESAA Length = 366 Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 135/329 (41%), Positives = 212/329 (64%), Gaps = 6/329 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAI 59 ++++ + +H SD+H+ P RI+G R+++ P +L+ E L QR Sbjct: 4 LDKVFNAAAEHFASDIHIAPGEPVVLRIQGQLKRLKSGPLTQEQCRKLILEILTPAQRKQ 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L ++ QLDF L + R RG+A + G+S A R +P L +LG P V+ ++L + Sbjct: 64 LEQDLQLDFVYDLGDVGRFRGNAMFHQAGMSAAFRFIPPWISSLYELGLPPVVEKVLDNH 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GLILVTGA G GKSTT+AAMV Y+N H+LT+EDP+E+++ ++ ++ QR++G Sbjct: 124 QGLILVTGAAGQGKSTTMAAMVDYINTKRSHHVLTVEDPIEFVHPYKKAVVNQRQLGEGT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +++A+ LRAALREDPDVI++GELRD ETI LA++AAETGHLV+ TL A + ++R++D Sbjct: 184 LSYANALRAALREDPDVIMIGELRDLETISLAISAAETGHLVIGTLACGSAPKTIDRIID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVA--LFELLINTPAVGNLIREGKTHQ 297 S+PA E++ +R L+ L+AV++Q+L + G+ E+LI T + NLIREGK Q Sbjct: 244 SYPAGEQNQIRAMLSEGLKAVVTQRL-IPNMNGKTMELAVEVLIVTLPISNLIREGKVFQ 302 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P ++QT ++VGM++ S V +G++ Sbjct: 303 IPSIMQTAKRVGMVSMDDSLIQLVEDGKV 331 >UniRef50_A5GHN1 Tfp pilus assembly protein, pilus retraction ATPase PilT n=5 Tax=Cyanobacteria RepID=A5GHN1_SYNPW Length = 357 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 205/323 (63%), Gaps = 10/323 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEE----LLREWLDDDQRA 58 +E+++ V+ SDLH+ S P R G++ D P +EE L+ L++ QR Sbjct: 5 IEDLMQELVEAGGSDLHIASGQPPYGRFSGQLRPM-RDEPLMEESCNRLIFSMLNNSQRK 63 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L + +LD A L R R + + Q+ + LR L S P +E L P V+ E K Sbjct: 64 TLEQTWELDCAYGLKGVARFRVNVYRQKGSYAACLRALGSKIPSIELLNLPPVVVETSKR 123 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGK+TTLAA++ ++N HILT+EDP+E++Y S + L+ QR++ Sbjct: 124 PRGLVLVTGPTGSGKTTTLAALLDHINHSRAEHILTIEDPIEFVYKSDQSLVHQRQLNED 183 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA+ LRAALREDPDVIL+GE+RD ETI+LA++AAETGHLV TLHT AAQ V+R+V Sbjct: 184 TRSFANALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVDRMV 243 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKL-----EVDKQEGRVALFELLINTPAVGNLIREG 293 D FP ++ +R QL+GSL AV SQ L Q GRV E++INTPA+ NLIREG Sbjct: 244 DVFPPAQQTQIRVQLSGSLVAVFSQTLCRRSNPAPGQFGRVMAQEIMINTPAIANLIREG 303 Query: 294 KTHQLPHVIQTGQQVGMITFQQS 316 KT QL IQTG ++GM T +++ Sbjct: 304 KTAQLYSQIQTGGELGMQTLEKA 326 >UniRef50_A8Z6P0 Twitching mobility protein n=12 Tax=Epsilonproteobacteria RepID=A8Z6P0_CAMC1 Length = 377 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 144/328 (43%), Positives = 200/328 (60%), Gaps = 5/328 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRA 58 +++ ++ V + SDLHL S + RI G + F D+E L + D Q++ Sbjct: 26 DIQTLLKTVVFNKASDLHLVSRSEPQIRIDGTLRPLEFGVLSGKDIENLCYALITDAQKS 85 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHG-ISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L N +LDFA+ L R RG+ + +G ++ A R++P P L+ L AP + ++K Sbjct: 86 ELENNKELDFAIELPNIGRFRGNYYYTMNGDLAAAFRIIPIDIPSLDDLNAPQIFKYIIK 145 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 E GLILVTG TGSGKSTTLAAM+ +N + HI+T+EDPVE+++ +++ L R IG Sbjct: 146 REKGLILVTGPTGSGKSTTLAAMLNEINLNYRKHIITVEDPVEFVHNNKKALFSHRNIGT 205 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++ L+ ALREDPD+IL+GE+RD ETI A+TAAETGHLV TLHT A Q + R+ Sbjct: 206 DTHSYSKALKFALREDPDIILVGEMRDRETISTAITAAETGHLVFGTLHTNSAIQTINRI 265 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VDSF E+ VRN L+ SL AV+SQ L GR A+ E+LIN A+ NLIRE K HQ Sbjct: 266 VDSFDGSEQLQVRNMLSVSLTAVISQSLIPKIGGGRCAVHEILINNMAISNLIRENKVHQ 325 Query: 298 LPHVIQTG-QQVGMITFQQSYQHRVGEG 324 + +Q QQ GM T Q+ + EG Sbjct: 326 IYSQMQLNQQQTGMSTQTQALMKALKEG 353 >UniRef50_Q3A779 Tfp pilus assembly protein, pilus retraction ATPase PilT n=2 Tax=Desulfuromonadales RepID=Q3A779_PELCD Length = 347 Score = 264 bits (674), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 143/315 (45%), Positives = 197/315 (62%), Gaps = 4/315 (1%) Query: 16 SDLHLCSAWPARWRIRGRMEAAPFDTPDVEE---LLREWLDDDQRAILLENGQLDFAVSL 72 SDLHL + P R G++E E+ LL E + + QR LDFA + Sbjct: 17 SDLHLSAGNPPLIRRSGQLEPILTQVLTHEQNKALLYEIMGEAQRKTYETTRDLDFAYEV 76 Query: 73 AE-NQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGS 131 E R R + F R G+ RL+P+ +QLG P + + + + GL+LVTG TGS Sbjct: 77 TELKSRFRANIFMGRLGMGAVFRLIPAEILSADQLGLPPAVLDFTQFKKGLVLVTGPTGS 136 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GKSTTLAAM+ ++N+ HILT+EDP+E+++ SQ+ LI QRE+G H +FA+ L+AALR Sbjct: 137 GKSTTLAAMIDHVNRTRKEHILTVEDPIEFVHVSQQSLINQREVGRHTRSFAAALKAALR 196 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 EDPD+IL+GE+RD ETI LA+TAAETGHLV TLHT AA+ V+R+++ FP +++ VR Sbjct: 197 EDPDLILVGEMRDLETIELAITAAETGHLVFGTLHTSSAAKTVDRIINVFPTNQQEQVRT 256 Query: 252 QLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMI 311 L SL+ V++Q+L R A E+L AV NLIREGKT Q+P VIQTG+ GM Sbjct: 257 MLGESLKGVIAQQLLRTVDGKRCAALEILSVNSAVSNLIREGKTFQIPSVIQTGKTQGMQ 316 Query: 312 TFQQSYQHRVGEGRL 326 Q+ Q + G++ Sbjct: 317 LMDQAIQDLLTAGKI 331 >UniRef50_Q1V0I1 Type II Secretion PilT n=3 Tax=root RepID=Q1V0I1_PELUB Length = 337 Score = 259 bits (662), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 130/317 (41%), Positives = 203/317 (64%), Gaps = 5/317 (1%) Query: 14 NVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAV 70 +SD H+ + WP +R G +++ D+++L+ ++ + E +LD +V Sbjct: 14 KISDFHIRTGWPLAFRQTGEIHKIQEIVVKEQDLQDLISTNCNETEMKKFSETHELDSSV 73 Query: 71 SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATG 130 +L+ R R + + G + LR + S P+++Q P VL +++ GL+LVTG TG Sbjct: 74 TLS-GLRFRANFYKTIQGPAAVLRRVESVIPEMDQFDLPQVLYDIVDMHKGLVLVTGPTG 132 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGKSTTLAA+V +N+ ++I+T+EDPVE+++ + ++ RE+G TF+S L+AAL Sbjct: 133 SGKSTTLAAIVNEINKTRTSNIITVEDPVEFIHKDLKSIVSHREVGKQTKTFSSALKAAL 192 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 REDPDVIL+GE+RD ET+ LALTAAETGHLV TLHT GA + R++D FP +++ +R Sbjct: 193 REDPDVILVGEMRDLETVSLALTAAETGHLVFGTLHTSGAPNTINRIIDVFPPEQQAQIR 252 Query: 251 NQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 Q++ SL+ V++Q+L K +GR A FE++ TP + NLIRE K HQ+P ++QT + G Sbjct: 253 AQISSSLKMVVTQRLLKTKDGQGRCAAFEVMKCTPPIQNLIREAKIHQIPSIMQTSVRDG 312 Query: 310 MITFQQSYQHRVGEGRL 326 MIT +S + V G++ Sbjct: 313 MITMTKSLEELVKAGKI 329 >UniRef50_Q0AZI8 Twitching motility protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZI8_SYNWW Length = 350 Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 214/326 (65%), Gaps = 10/326 (3%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD----TPDVEELLREWLDDDQ 56 + +EEI+ +V+ SD+HL + P +R+ G + + P D +V+ L RE + Sbjct: 4 IKLEEILKKAVEMGASDVHLGYSQPPLYRVNGHLVSLPEDLLLGKEEVQSLAREIIP--H 61 Query: 57 RAIL---LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLP 113 + I+ + G++DFA S+ R R + F QR +LA+R++P P+ ++LG P ++ Sbjct: 62 KGIMEAFQKQGEVDFAYSIPGIARFRVNLFKQRSSWALAIRIIPLKIPEWDELGLPPIVR 121 Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 EL E GL+L++G++GSGKSTTLAAM+ LNQ HILTLEDP+EYL+++ C++ QR Sbjct: 122 ELAMQEKGLVLISGSSGSGKSTTLAAMIDLLNQSRKFHILTLEDPIEYLHSNHNCIVNQR 181 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 EIG +F LRAALR+DPDVI+LGE+RD ETI +TAAETGHLVLA+LH+ A Q Sbjct: 182 EIGADSKSFPQALRAALRQDPDVIMLGEMRDLETISTTITAAETGHLVLASLHSGTAIQT 241 Query: 234 VERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIRE 292 +ER++D FP ++ +R QLA L+ V++Q+L +GR+ E++I TPAV NLIRE Sbjct: 242 LERIIDIFPPHQQTQLRLQLANCLQGVINQQLLCRADGKGRILAVEVMIATPAVRNLIRE 301 Query: 293 GKTHQLPHVIQTGQQVGMITFQQSYQ 318 K HQ+ +QTG GM+T +++ Q Sbjct: 302 NKIHQIYSSMQTGSSFGMVTMEKAMQ 327 >UniRef50_B9LZ76 Twitching motility protein n=98 Tax=cellular organisms RepID=B9LZ76_GEOSF Length = 356 Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 143/299 (47%), Positives = 197/299 (65%), Gaps = 4/299 (1%) Query: 16 SDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLHL + P +R+ G ME F + D+ +L E L + Q A + LDFA S+ Sbjct: 17 SDLHLSTGSPPIFRLNGEMERLNFKSLGHEDLRSILYEILSETQIADFEKRKDLDFAYSV 76 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSG 132 R RG+ Q GI+ R++PS +QL P + +L + GL+LVTG TGSG Sbjct: 77 PGIARFRGNMLMQHRGIAAVFRIIPSKILTADQLNLPEGVRKLTALKKGLVLVTGPTGSG 136 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 KSTTLAAM+ +N HILTLEDP+E+++ ++ L QR+IG H +FA+ LRAALRE Sbjct: 137 KSTTLAAMIDLINSTRREHILTLEDPLEFIHENKMSLFNQRQIGEHSESFAAALRAALRE 196 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 DPDVIL+GE+RD ETI LA++AAETGHLV TLHT AA+ V+R++D FP ++ VR Sbjct: 197 DPDVILVGEMRDLETISLAMSAAETGHLVFGTLHTSSAAKTVDRIIDVFPKDAQEQVRAM 256 Query: 253 LAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 L+ SL+ V+SQ+L + +GR A E+++ TPA+GNLIREGKT Q+P ++QT ++ GM Sbjct: 257 LSESLKGVISQQLLRNADGKGRSAALEIMMGTPAIGNLIREGKTFQIPSIMQTAKKDGM 315 >UniRef50_C0D956 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D956_9CLOT Length = 349 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 149/319 (46%), Positives = 197/319 (61%), Gaps = 6/319 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQR 57 M +EE++ + SDLHL P R+R GR M+ D E RE + Sbjct: 1 MTIEELIRTAGDAGGSDLHLVKGLPPRFRRDGRLEDMDGEMLTDTDCEGYARELAGEAYE 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 I E G+LD A + A R+R + F Q+ IS A+RLL P+L+ LG P + Sbjct: 61 RIR-EIGELDLAGTFA-GIRVRINLFRQQGHISAAIRLLSGRIPELDSLGLPPAVSRFPS 118 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILVTG TGSGKSTTLAA++ +N+ HI+TLEDPVEY+Y +C++ QR+IG Sbjct: 119 MKRGLILVTGETGSGKSTTLAAILNEINRTRKGHIITLEDPVEYIYTPDQCVVNQRQIGT 178 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ GLRAALREDPDVIL+GE+RD +TI ALTAAETGHLV TLHT AA +++R+ Sbjct: 179 DTRSYGDGLRAALREDPDVILIGEMRDLDTIETALTAAETGHLVFGTLHTNSAADSIDRI 238 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKTH 296 V+ FP + +R QL+ SL AVLSQ+L E +GRVA EL++ TPA+ NLIRE KT Sbjct: 239 VNVFPDGLQRQIRLQLSTSLLAVLSQQLVERKNGKGRVAACELMMVTPAIRNLIREAKTP 298 Query: 297 QLPHVIQTGQQVGMITFQQ 315 Q+ + + Q G IT Sbjct: 299 QIASSMASAAQEGSITMDN 317 >UniRef50_C3WB33 Twitching motility protein n=2 Tax=Fusobacterium RepID=C3WB33_FUSMR Length = 345 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 132/314 (42%), Positives = 209/314 (66%), Gaps = 4/314 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 M EE++ + + SD+HL +R+ G ++ + + ++ L + +R Sbjct: 8 MLFEELLTSAREQRASDIHLVYGELPTFRVNGELIKIGDELVNKRFLSLIVDLVLSERER 67 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 I +N +LD + + N R RG+ +R I +++RL+ + +E+LG P +L +L++ Sbjct: 68 NIFYQNRELDCSFEDSNNLRYRGNFHWERGNIGISIRLIENSIKSMEELGLPKILKKLIE 127 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 S+ GLIL+TG +GSGKSTTLA+MV LN + +I+TLEDP+EYL+ S++ LI+QREIG Sbjct: 128 SKKGLILITGPSGSGKSTTLASMVEELNSTKNLNIITLEDPIEYLFKSKKSLIRQREIGR 187 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA GL++ LR+DPDVI++GELRD E+I ALTA+ETGHLVL TLHT A++ + R+ Sbjct: 188 DTHSFAQGLKSVLRQDPDVIMVGELRDRESIAAALTASETGHLVLGTLHTNSASETISRI 247 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VD FP +E++ +R +LA +L+ V+SQ+L V +E R +E+L++ PAV NLI K +Q Sbjct: 248 VDVFPTEEQNEIRVKLATTLKGVVSQRL-VRTKERRRGAYEILLSIPAVSNLILGNKLNQ 306 Query: 298 LPHVIQTGQQVGMI 311 + VI++ +++GMI Sbjct: 307 IDSVIESNKKMGMI 320 >UniRef50_A6C2Q7 Twitching motility protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2Q7_9PLAN Length = 356 Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 4/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M M +++ +V N SD+ L +RI G ++ P D + +L + L+ Q+ Sbjct: 1 MEMNDLLHAAVDSNASDILLAIDAAPMFRIDGTLKKTALEPLDPVTISDLCDQVLNPQQK 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 IL +DFA+++ R R + QR + A+R + L L P V+ EL + Sbjct: 61 EILDRQKDVDFAITIPRLGRFRFNIHVQRGTYAAAIRRFSNEICSLSSLDLPPVVEELTR 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILVTG TGSGKSTTLAAMV +NQ HI+TLEDP+EY + R LI+QREIG Sbjct: 121 LKTGLILVTGQTGSGKSTTLAAMVEAINQRDAKHIITLEDPIEYQFQHGRSLIEQREIGE 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 C FASGL+ LR+DPDVIL+GELRD +TIR+AL AAETGHLVL++LH AA V+RL Sbjct: 181 DCPGFASGLKHVLRQDPDVILIGELRDLDTIRVALQAAETGHLVLSSLHVSSAAGVVDRL 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 V+ FP +E+ VR+ LA +LR V++QK L GRVA E+++ AV IRE +H Sbjct: 241 VEVFPPEEQSQVRSHLAETLRGVITQKLLPAADGNGRVAALEIMLMNRAVQTSIRESTSH 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P +I T +++GM T +Q+ + ++ G++ Sbjct: 301 LIPGIISTSRRMGMQTMEQALKEQLLNGKV 330 >UniRef50_A5IML1 Twitching motility protein n=11 Tax=Thermotogaceae RepID=A5IML1_THEP1 Length = 360 Score = 256 bits (653), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 131/307 (42%), Positives = 199/307 (64%), Gaps = 7/307 (2%) Query: 16 SDLHLCSAWPARWRIRGRM----EAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVS 71 +D+H+ P +RI G + + + L++ + + + ++DF+ + Sbjct: 21 TDVHISVGCPPYYRIDGDLVPQEKYGKLTKESIMNALKDLFTEIGQPFPPKTKEVDFSFT 80 Query: 72 LAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGS 131 +AE R+RG+ + +R +LA RL+P ++LG P +L ++ + GLILV G TGS Sbjct: 81 VAEAIRVRGNLYYERKNPALAFRLIPKKIRTFQELGLPEILKTFVERKYGLILVAGPTGS 140 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GKSTTLAAM+ ++N++ HI+T+EDP+EY++ +++ +I QRE+G +F +GL+ ALR Sbjct: 141 GKSTTLAAMIDHINENFPHHIITIEDPIEYVFTNKKSVIHQRELGSDTDSFYNGLKYALR 200 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 +DPDVIL+GE+RD ET+ LALTAAETGHLVLAT+HT AA A ER++D FPA ++ + Sbjct: 201 QDPDVILVGEMRDLETMALALTAAETGHLVLATVHTNSAASAPERIIDVFPAHQQRQIAL 260 Query: 252 QLAGSLRAVLSQKLEVDKQE--GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 QLA +L AV+ Q+L V K G + E+++ TPAV NLIRE K HQL +IQ G + G Sbjct: 261 QLANTLIAVIYQRL-VPKANGIGFTPILEIMVGTPAVRNLIRENKLHQLESLIQAGARHG 319 Query: 310 MITFQQS 316 M+ F + Sbjct: 320 MVLFDDA 326 >UniRef50_B6BQP9 Type II Secretion PilT n=4 Tax=Proteobacteria RepID=B6BQP9_9RICK Length = 338 Score = 255 bits (652), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 130/316 (41%), Positives = 202/316 (63%), Gaps = 5/316 (1%) Query: 15 VSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVS 71 +SD H+ S P +R G ++ D+++L+ ++ + A E +LD AV Sbjct: 15 ISDFHIRSGSPLAYRQTGEIIKVADTNVTAQDLKDLISMNCNEAETARFNETHELDSAVM 74 Query: 72 LAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGS 131 L+ R R + + +G + LR + S P ++Q P L +++ GL+LVTG TGS Sbjct: 75 LS-GLRFRANFYKTINGPAAVLRRVESKIPDMDQFNLPQALYDIVDFHKGLVLVTGPTGS 133 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GKSTTLAA+V +N+ ++I+T+EDPVE+++ + ++ RE+G +F++ L+AALR Sbjct: 134 GKSTTLAAIVNEINKTRTSNIITVEDPVEFIHKDNQSIVSHREVGKQTQSFSAALKAALR 193 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 EDPDVIL+GE+RD ETI LALTAAETGHLV TLHT GA + R++D FP ++++ +R Sbjct: 194 EDPDVILVGEMRDLETISLALTAAETGHLVFGTLHTSGAPSTINRIIDVFPPEQQEQIRA 253 Query: 252 QLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 Q++ SL+ V++Q+ L+ +GRV FE++ TP V NLIRE K HQ+P ++QT + GM Sbjct: 254 QISTSLKMVVTQRLLKTRDGQGRVGAFEIMKCTPPVQNLIREAKIHQIPSIMQTAVRDGM 313 Query: 311 ITFQQSYQHRVGEGRL 326 IT ++S + V G++ Sbjct: 314 ITMEKSLEELVKSGKI 329 >UniRef50_A9BA92 Tfp pilus assembly protein, pilus retraction ATPase PilT n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BA92_PROM4 Length = 347 Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 198/323 (61%), Gaps = 3/323 (0%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRG--RMEAAPFDTPDVEELLREWLDDDQRAILLE 62 EIV+ ++K SD+HL P R+ ++ + D++ L+ E L ++ E Sbjct: 6 EIVSYAMKAGSSDIHLEEGSPIAVRVNSDIKISGQKLRSQDMDNLMMELLGKEKVNEFNE 65 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 G LD + S+ RLR +A+ L LRLLP + P+ + LG P +L K E G+ Sbjct: 66 LGDLDSSTSIEGLSRLRINAYIANEKRCLTLRLLPDNLPKWQDLGLPEPFIKLSKLERGM 125 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA-SQRCLIQQREIGLHCMT 181 +L TG TGSGKSTTLAA + + + HILT+EDP+E+++ ++ +I QRE+ + Sbjct: 126 VLCTGPTGSGKSTTLAAFINCILETQKRHILTIEDPIEFIFEHTENSIIHQREVKRDTDS 185 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 FA L+AALREDPDVI +GE+RD ETI+LA+TAAETGHLVL TLHT AA+ VER+VD F Sbjct: 186 FARALKAALREDPDVIYIGEMRDLETIQLAITAAETGHLVLGTLHTSSAAKTVERIVDVF 245 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 P +++ R Q++ SL ++SQ L + R +ELLINTPA+GNLIRE K Q+ Sbjct: 246 PGDQQEQARLQVSTSLAGIMSQTLCKNTLGKRSLAYELLINTPAIGNLIRERKVSQIYSQ 305 Query: 302 IQTGQQVGMITFQQSYQHRVGEG 324 +QTG GM T +Q V +G Sbjct: 306 LQTGSNDGMNTLEQCLNDLVAQG 328 >UniRef50_D2R472 Twitching motility protein n=8 Tax=Bacteria RepID=D2R472_9PLAN Length = 378 Score = 254 bits (648), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 129/311 (41%), Positives = 193/311 (62%), Gaps = 3/311 (0%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 +++++ +VK SD+H+ P +R+ GRM E + D L++ + + Sbjct: 6 IDKLLQAAVKQGASDIHIVVGQPPVFRLHGRMRKLETKVLEADDAVGLMKSIAPERAQRE 65 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L E G DF + + R R S F QR +S+ LR +P+ +QLG P V +L+ Sbjct: 66 LQERGSADFGFAFGDLARFRVSIFKQRGFVSMVLRQIPNTMLTPQQLGLPDVCVKLVMRP 125 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL LVTG TGSGKSTTLA++V Y+N++ D HI+T+EDP+E+ + ++ + QREIG+ Sbjct: 126 RGLFLVTGPTGSGKSTTLASLVNYINENVDHHIITIEDPIEFYHYHKKSTVNQREIGVDV 185 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F+ +R ALR+DPDVIL+GE+RD ETI A++AAETGH+V TLHT A + R++D Sbjct: 186 PSFSEAIRRALRQDPDVILVGEMRDLETIEAAISAAETGHVVFGTLHTNSAQGTINRIID 245 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 +FP +D VR QL+ S+ V++Q L GR A +E+L+ T + NLIRE KT ++ Sbjct: 246 AFPGNLQDQVRTQLSTSIIGVVAQSLLPKIGGGRCAAYEILVVTSGIANLIRENKTFRIN 305 Query: 300 HVIQTGQQVGM 310 IQTG ++GM Sbjct: 306 SAIQTGAKLGM 316 >UniRef50_UPI000190EDE4 Type II secretion, ATP-binding, protein n=5 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190EDE4 Length = 191 Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 125/191 (65%), Positives = 144/191 (75%), Gaps = 11/191 (5%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 MNMEEIV LSVKHNVSDLHLC+AWPARWR +GRME APF PDV+ LL +WL+D Q+ Sbjct: 1 MNMEEIVTLSVKHNVSDLHLCNAWPARWRKQGRMETAPFTAPDVDRLLLDWLNDAQQYQW 60 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 +GQLDFAVSL+ +RLR SAF + G SLA+RLLP CP L ++ P ++P LL SEN Sbjct: 61 RTHGQLDFAVSLSGTRRLRASAFTHQQGTSLAIRLLPERCPDLAEIQTPPIVPALLASEN 120 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GLILVTGATG GKSTTLAAMVG+LNQHAD HILTLEDP+EY Y S+RCLI Sbjct: 121 GLILVTGATGCGKSTTLAAMVGHLNQHADKHILTLEDPIEYRYTSKRCLI---------- 170 Query: 181 TFASGLRAALR 191 A+G R ALR Sbjct: 171 -LAAGNRPALR 180 >UniRef50_C7R4E5 Twitching motility protein n=13 Tax=Bacteria RepID=C7R4E5_JONDD Length = 566 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 138/321 (42%), Positives = 202/321 (62%), Gaps = 10/321 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTP-DVEELLRE---WLDDD 55 +++++ V + SDLHL + +R IR E P +D P D + L R L Sbjct: 193 LDDVLRDMVVQDASDLHLTNR--SRPMIRKAGELTPLEGYDDPLDADALRRSIYTLLTQK 250 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 QR E +LDFA + + R R + + QR + A R++P+ LE LG P + Sbjct: 251 QREQFEEALELDFAYQVPDGARFRVNLYHQRDSVGAAFRVIPTEIKPLEDLGVPPSVGAF 310 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 K GL+LVTG TGSGKSTTLA+++ +N+ HI+T+EDP+E+L+ ++C++ QRE+ Sbjct: 311 AKLARGLVLVTGPTGSGKSTTLASIIDLVNRSRADHIMTVEDPIEFLHEHKKCVVNQREV 370 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +FAS L+ LR+DPD+IL+GELRD ETI +ALTAAETGHLV ATLHT+ AAQ ++ Sbjct: 371 GTDTHSFASALKHVLRQDPDIILVGELRDLETISIALTAAETGHLVFATLHTQDAAQTID 430 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGK 294 R++D FP ++++ +R QLA +++ V+ Q L + GRV E+L+ TP + N+IREGK Sbjct: 431 RVIDVFPPEQQEQIRVQLASAIQGVVCQTLCKRADGPGRVVATEVLVATPGIRNMIREGK 490 Query: 295 THQLPHVIQTGQQVGMITFQQ 315 THQ+ +Q G+ GM T Q Sbjct: 491 THQIYSSMQAGKNDGMHTMDQ 511 >UniRef50_UPI0001C37050 pili biogenesis protein PilT-like ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37050 Length = 366 Score = 250 bits (638), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 130/302 (43%), Positives = 188/302 (62%), Gaps = 6/302 (1%) Query: 16 SDLHLCSAWPARWRIRG-----RMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAV 70 SDLH R+ G R + D ++ E+ R+ ++ Q+ + DF+ Sbjct: 19 SDLHFTDRIAPVVRLNGNLRTMRTQYPEMDAEEIMEIARQMTNEKQQTSINNGKDTDFSF 78 Query: 71 SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATG 130 + N R R + + Q+ ++A+RLL + P L+ LG P++L E GL+LVTG TG Sbjct: 79 TTRSNYRHRVNVYFQKGKPAIAIRLLRNDIPTLDDLGLPSILAEFAMRPRGLVLVTGPTG 138 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGKSTTLA M+ ++N + AHI+T+EDP+EY++ +RC++ QREIG +F+ LRAAL Sbjct: 139 SGKSTTLAGMIDHVNLNKSAHIITIEDPIEYVHEHKRCMVNQREIGADVDSFSLALRAAL 198 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 REDPDVIL+GE+RD ETI+ A+TAAETGHLV++TLHT AA + R++D +P ++ +R Sbjct: 199 REDPDVILVGEMRDFETIQAAVTAAETGHLVMSTLHTTSAADTINRIIDVYPEHQQQQIR 258 Query: 251 NQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 QLA +L V+SQ L K GR+A E+L T AV IR+ K H + IQTG+ G Sbjct: 259 TQLANNLVGVISQTLIPKKDGSGRIAAMEILRVTDAVSAQIRDNKIHLIQSTIQTGKAEG 318 Query: 310 MI 311 M+ Sbjct: 319 MM 320 >UniRef50_A6WCF2 Twitching motility protein n=56 Tax=Bacteria RepID=A6WCF2_KINRD Length = 382 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 131/322 (40%), Positives = 194/322 (60%), Gaps = 9/322 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD------TPDVEELLREWLDD 54 + + +++ +++ SD+HL R+ G +E P D T ++E++ L Sbjct: 31 VRVNDVLIRALELGASDIHLTVGTHPSARVSGEVE--PMDEFPRMTTNVLQEMIYAILTQ 88 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 QR N +LDFA + + R R + + QR A R +P LE LG P V+ Sbjct: 89 KQRETFEANLELDFAYQVPGHSRFRVNVYRQRESTGAAFRQIPFEIKPLEDLGVPPVVGS 148 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + G +LVTG TGSGKSTTLA++V N+ HI+T+EDP+E+L+ + C++ QRE Sbjct: 149 FAGLQRGFVLVTGPTGSGKSTTLASVVDLANRTRRDHIMTVEDPIEFLHRHKSCIVNQRE 208 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +G +FA+ L++ LR+DPD+IL+GE+RD ETI +ALTAAETGHLV TLHT AA + Sbjct: 209 VGEDTKSFANALKSVLRQDPDIILVGEMRDLETISVALTAAETGHLVFGTLHTSSAASTI 268 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREG 293 +R++D FP ++ +R Q AG+++ ++ Q L + GRV E+L+ TPA+ NLIREG Sbjct: 269 DRVIDVFPPHQQTQIRAQFAGAIQGIVCQTLCKRADGRGRVVATEVLVATPAIRNLIREG 328 Query: 294 KTHQLPHVIQTGQQVGMITFQQ 315 KTHQ+ +Q G Q GM T Q Sbjct: 329 KTHQIGTAMQAGAQFGMHTLDQ 350 >UniRef50_C1AA13 Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA13_GEMAT Length = 388 Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 132/314 (42%), Positives = 195/314 (62%), Gaps = 6/314 (1%) Query: 11 VKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TP-DVEELLREWLDDDQRAILLENGQL 66 ++ + SDLH+ + + R+ G + +A + TP D +L L ++Q+ +L Sbjct: 19 IERDASDLHVSAGDRPKLRVDGDIVSATVEHVLTPRDTLQLAYSVLTENQKKRFEMEDEL 78 Query: 67 DFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVT 126 DF+ +A R RG+ F QR +S+ +R +P +L P V+ + GL+LVT Sbjct: 79 DFSFGIANLSRFRGNVFKQRGCVSMVIRRIPFQIKTFAELQLPQVISSFAERPRGLVLVT 138 Query: 127 GATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGL 186 G TGSGKSTTLAAM+ +N HI+T+EDP+E+++ + C+I QRE+G +FAS L Sbjct: 139 GPTGSGKSTTLAAMIDKINTERRGHIITVEDPIEFIHRHRNCIINQREVGADTKSFASAL 198 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 + ALREDPDVIL+GE+RD ETI+ ALT AETGHLV ATLHT AA+A+ R++D FP+ ++ Sbjct: 199 KYALREDPDVILIGEMRDLETIQAALTIAETGHLVFATLHTNSAAEAINRIIDVFPSHQQ 258 Query: 247 DPVRNQLAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 VR QLA L +++Q L GR E+L+ TPA+ LIR+ K HQ+ ++Q+G Sbjct: 259 SQVRAQLAFVLEGIITQVLLPRLTGRGRAMAAEILVVTPAIRALIRDDKVHQIYSLMQSG 318 Query: 306 QQVGMITFQQS-YQ 318 ++ GM T + YQ Sbjct: 319 KKFGMQTMNDALYQ 332 >UniRef50_Q1CXQ0 Twitching motility protein PilT n=6 Tax=Deltaproteobacteria RepID=Q1CXQ0_MYXXD Length = 369 Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 130/302 (43%), Positives = 191/302 (63%), Gaps = 4/302 (1%) Query: 16 SDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLHL +P RIRG + P +++ LL E +Q+ ++E+ LDFA S Sbjct: 19 SDLHLGIGYPPMGRIRGELVPLREQPLTAAEMQALLFEICSPEQQRQIVEDLDLDFAYSY 78 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSG 132 R R + F + G++ R +PS LE L P V+ +L + +GL+LVTG TGSG Sbjct: 79 GTKARFRANYFNKMTGLAAVFRTIPSKVLSLEDLKTPEVVRKLSERRSGLVLVTGPTGSG 138 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 KSTTLAAM+ ++N+ AH+LT+EDPVE+++ S R + RE+G H +FA+ +R+A RE Sbjct: 139 KSTTLAAMINHINKTRPAHVLTIEDPVEFVHESMRAQVTHREVGPHASSFATAIRSAGRE 198 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 DP+VIL+GELR +ET++LAL A G LV AT+HT A ++R++++FPA E+ VR Sbjct: 199 DPNVILIGELRTNETMKLALQLASFGVLVFATVHTNSAPATIDRIINAFPADEQQQVRGM 258 Query: 253 LAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMI 311 LA SL +++Q+L + +GRVA E+L+ PA+ ++IREGK Q+ +Q GQ GM Sbjct: 259 LAESLAGIVAQQLIKTADGKGRVAALEILVGGPAIASMIREGKVFQIASKMQAGQGQGMQ 318 Query: 312 TF 313 T Sbjct: 319 TL 320 >UniRef50_C4Z3A4 Twitching motility protein PilT n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3A4_EUBE2 Length = 349 Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 137/326 (42%), Positives = 206/326 (63%), Gaps = 6/326 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD--DDQRA 58 M +++++ + SDLH+ + R G ++ P +EE + D +D+ Sbjct: 1 MELKQLIRKARSVQCSDLHITAGDFVAVRRFGELKLIDIK-PTIEETEKMLFDILNDEDI 59 Query: 59 ILLENGQ-LDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAP-TVLPELL 116 ++NG+ +D A S RLR + + QR ++ ++RLL ++ P E LG P +L EL Sbjct: 60 RRVKNGEDIDVAASDESGGRLRINIYHQRRNLAASIRLLDANIPSFEDLGLPGKLLAELA 119 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +GL+LVTG TGSGKSTTLAAM+ Y+N + HI+T+EDP+EY+Y ++ +I QR++G Sbjct: 120 SKRSGLVLVTGPTGSGKSTTLAAMIDYINNNMARHIITVEDPIEYVYGFKQSMIHQRQVG 179 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 FAS LR+ALREDPDVIL+GE+RD ETI A+TAAETGHLV++TLHT+ AAQ VER Sbjct: 180 RDVPNFASALRSALREDPDVILVGEMRDYETINAAITAAETGHLVMSTLHTKSAAQTVER 239 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKT 295 ++ + P + + + QL+ L V++Q L ++EGR+A E+++N AV NLI+E KT Sbjct: 240 IISACPIEAQPALTIQLSSILTGVITQTLVPFARKEGRIAATEVMLNNTAVANLIKEKKT 299 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRV 321 +Q+ V+Q+ GM T S + V Sbjct: 300 NQIQTVLQSNLSSGMHTLNYSLANLV 325 >UniRef50_C8W152 Twitching motility protein n=2 Tax=Bacteria RepID=C8W152_DESAS Length = 368 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 134/323 (41%), Positives = 201/323 (62%), Gaps = 5/323 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA----APFDTPDVEELLREWLDDDQ 56 ++ +++ S + + SDLHL S P R+ G ++ P D++ L+ + L Q Sbjct: 16 FHVNQLLKDSKERDASDLHLTSNTPPVLRMSGGLKVLDNYRPLTPEDIKRLVYQVLSPRQ 75 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 +L + +D A+ A R R +A+ QR I+ +R L P LE LG P + L Sbjct: 76 VEVLEQKLSVDLAIGFAGIGRFRVNAYFQRGAITCVMRRLADDIPLLENLGLPESVYALC 135 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 NGL+LVTGATGSGKSTTLAA++ +N+ +I+T+EDP+EY+Y +++ +I QRE+ Sbjct: 136 DLPNGLVLVTGATGSGKSTTLAAVIDRINEKYRHNIITIEDPIEYIYFNRQSIINQRELH 195 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA LR++LR DPDVIL+GE+RD ETIR A+ AAETGHLV +TLH+R A +V R Sbjct: 196 TDVESFADALRSSLRSDPDVILVGEMRDLETIRTAIMAAETGHLVFSTLHSRDAVSSVSR 255 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKT 295 ++ FP +E+ +R QL+ SL+AV+SQ+ L +GR E+++ TPA+ NLIR GK Sbjct: 256 MIGVFPPEEQAQIRQQLSVSLKAVISQQLLSCAGGKGRALAAEVMVVTPAISNLIRLGKQ 315 Query: 296 HQLPHVIQTGQQVGMITFQQSYQ 318 + + TG ++GM T +QS + Sbjct: 316 EHIHMALDTGTKLGMQTMEQSLE 338 >UniRef50_A5FPX9 Twitching motility protein n=4 Tax=Dehalococcoides RepID=A5FPX9_DEHSB Length = 371 Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 129/306 (42%), Positives = 189/306 (61%), Gaps = 5/306 (1%) Query: 16 SDLHLCSAWPARWRIRGRMEA----APFDTPDVEELLREWLDDDQRAILLENGQLDFAVS 71 SDLHL + P R+RG +EA D++ + ++R + +LDF S Sbjct: 16 SDLHLVAQSPPLVRVRGDLEALNGYEQLQPADIKTAFEQLTTHEERETFYQEWELDFGYS 75 Query: 72 LAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGS 131 L RLR +A QR ISLA+RLLP + P + +L P + +L+ GL++VTG TGS Sbjct: 76 LDGVGRLRCNAAMQRGAISLAIRLLPPNIPTISELELPDICQKLVTKPRGLVIVTGPTGS 135 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GKSTTLAAM+ +LN H++T+EDP+EY++ +C + QR++G ++F L+ LR Sbjct: 136 GKSTTLAAMIQHLNNTESKHVVTIEDPIEYVHPCIKCAVTQRQLGSDTLSFGHALKHVLR 195 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 ++PDVI++GE+RD +T LT AETGHLVL+T H A QA+ER++D FP E+ + Sbjct: 196 QNPDVIMVGEMRDLDTAAAVLTIAETGHLVLSTSHAPSAYQALERIIDLFPPHERHLAQT 255 Query: 252 QLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 +LA + VL Q L +GR+ E+++ +PAV NLIREGK +QLP+VI+T GM Sbjct: 256 RLASLIEGVLCQTLIPRSNTDGRIVAVEIMLGSPAVRNLIREGKFYQLPNVIRTSHDEGM 315 Query: 311 ITFQQS 316 IT ++ Sbjct: 316 ITMDEA 321 >UniRef50_C8WIR6 Twitching motility protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WIR6_EGGLE Length = 351 Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 141/327 (43%), Positives = 204/327 (62%), Gaps = 17/327 (5%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA------PFDTPDVEELLR----E 50 MN+E I+ ++ + SD+HL P ++R+ G +E A P D E+L R + Sbjct: 1 MNVEHIIDMARQVGASDVHLVCGLPVKFRLAGCLENAGVDGDAPLSHDDCEQLARRLAGD 60 Query: 51 WLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT 110 D QR G+LD A ++ R+R + F Q+ +S ALRLL P LE LG P+ Sbjct: 61 GFDRIQRI-----GELDRAETIG-GVRVRINLFRQQGHVSAALRLLSDRIPALETLGLPS 114 Query: 111 VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 + + + + G+++VTG TGSGKSTTLAA++ +N +I+T+EDP+EY+Y + +I Sbjct: 115 AVMDFPRIQRGIVVVTGETGSGKSTTLAALIDSINHTRAENIITMEDPIEYVYTPDQSVI 174 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 QREIG ++++ LRA LREDPD+IL+GE+RD +TI+ ALTAAETGH VLATLHT+ A Sbjct: 175 SQREIGQDTESYSNALRAVLREDPDIILVGEMRDLDTIQTALTAAETGHFVLATLHTKSA 234 Query: 231 AQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNL 289 A +++R+VD FP + VR QL+ +L AVLSQ+L + GR EL++ TPA+ NL Sbjct: 235 ADSIDRMVDVFPEGLQRQVRMQLSTTLVAVLSQQLLPRRDGMGRALACELMMVTPAIRNL 294 Query: 290 IREGKTHQLPHVIQTGQQVGMITFQQS 316 IREGKT Q+ + T G +T + Sbjct: 295 IREGKTPQIAGSLATSASAGSVTMDNA 321 >UniRef50_C3RLB1 Twitching motility protein n=3 Tax=Bacteria RepID=C3RLB1_9MOLU Length = 347 Score = 247 bits (630), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 140/331 (42%), Positives = 202/331 (61%), Gaps = 12/331 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE------ELLREWLDDDQ 56 + EI+ S + SD+H+ + + R G + P + P E EL+ + L D+ Sbjct: 2 INEILKASRNNKCSDIHISANTGIKVRQDGLLADYPIEFPQNELIKMIMELIPKRLIDN- 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + + DF + E +R R + + ++ I A+R++ LEQL PTVL ++ Sbjct: 61 ---VDRHEDADFVYHVWE-ERYRVNIYYEQTNICAAIRVINDEILTLEQLEMPTVLNQIA 116 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GL+LVTG TGSGKSTTLAAM+ +N+ + HILT+EDP+EY+Y ++ LI QREIG Sbjct: 117 MEPRGLVLVTGPTGSGKSTTLAAMIDLVNKQRNCHILTIEDPIEYVYKQKQALIHQREIG 176 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 F LR+A+REDPDVIL+GE+RD ETI +T AETGHLV +TLHT GAA+ ++R Sbjct: 177 EDVKDFDMALRSAMREDPDVILVGEMRDYETISAVITLAETGHLVFSTLHTIGAAKTIDR 236 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 ++D FP ++ VR QL+G L AV++Q L GRVA E++ AV NLIR+ K Sbjct: 237 IIDIFPQHKQAQVRTQLSGVLNAVITQTLLPHASGIGRVAAVEIMRANDAVRNLIRDNKG 296 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ VIQTG++ GMI+ + + V EG++ Sbjct: 297 HQINSVIQTGKKEGMISLNHALANLVREGKI 327 >UniRef50_Q1CXQ1 Twitching motility protein n=4 Tax=Myxococcales RepID=Q1CXQ1_MYXXD Length = 574 Score = 246 bits (629), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 131/314 (41%), Positives = 199/314 (63%), Gaps = 3/314 (0%) Query: 16 SDLHLCSAWPARWRIRGRMEA-AP-FDTPDVEELLREWLDDDQRAILLENGQLDFAVSLA 73 SD+H+ + P +R G + A P D VE+LL + + R +L G DF++ Sbjct: 208 SDVHIIAERPPLFRFAGELMAQGPVLDATTVEKLLLPVVPERLRPVLEREGSCDFSLETP 267 Query: 74 ENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGK 133 E R R + QR G+ RL+ P LE LG P + + GLI++TG +G GK Sbjct: 268 EMGRFRVNVSRQRTGLKGTFRLIAREVPTLESLGLPADIAKATHHHQGLIVITGPSGHGK 327 Query: 134 STTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRED 193 ++TLAA+V +N+ H+LT+EDPVE+++ +R LI QRE+G H TFAS L+ +LRED Sbjct: 328 TSTLAALVDLINRETSHHVLTVEDPVEFVHPRKRALISQREVGSHTKTFASALKGSLRED 387 Query: 194 PDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQL 253 PDVI++GELRD+ET+R+AL+AAETGHL+++T++T AA+ ++RL+D FP ++ VR L Sbjct: 388 PDVIVVGELRDTETVRMALSAAETGHLLISTMNTPSAAKTIDRLIDLFPPGDQQQVRLSL 447 Query: 254 AGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMIT 312 + LR ++SQ+L +G VA E+L + ++GNLIR+ KT Q+P + Q G+ +G+I Sbjct: 448 SSGLRLIVSQRLMPSADGKGLVAAAEVLPGSVSLGNLIRDNKTFQIPSLQQRGKSLGIIR 507 Query: 313 FQQSYQHRVGEGRL 326 F+ S V G++ Sbjct: 508 FEDSLADLVRAGKV 521 >UniRef50_B8GP69 Type II secretion system protein (Twitching motility protein) n=3 Tax=Proteobacteria RepID=B8GP69_THISH Length = 402 Score = 246 bits (628), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 124/319 (38%), Positives = 199/319 (62%), Gaps = 3/319 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQR 57 M++E + L + N SDL PA +I G M T V ++ E +D+ + Sbjct: 1 MSIEPYLKLMAQKNASDLFFTVGAPASVKIEGEMRPISRHTMAPGSVRDMAYELMDERKI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ +S+ E R R + + QR +S+ +R + S P +EQL P VL +L+ Sbjct: 61 QEFERTREMNIGISVEELGRFRVNIYVQRGEVSMVIRYIKSDVPSIEQLHLPHVLKDLVL 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 ++NGL+LV G+TGSGKST+LAAM+ Y N ++ HILT+EDP+EY + ++ ++ QRE+GL Sbjct: 121 NKNGLVLVVGSTGSGKSTSLAAMLDYRNANSYGHILTVEDPIEYSFTHRKSIVGQREVGL 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++ + LR A+RE PD+I++GE+RD ET+ ALT A+TGHLVL+TLH A QA++R+ Sbjct: 181 DTLSYENALREAMREAPDMIMIGEIRDRETMEAALTYADTGHLVLSTLHAVNANQALDRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + + L+ +++ ++SQ+L V K R+ E+L+NTP + LIR+G+ Sbjct: 241 INFFPPDSRRQILMDLSLNIKGIMSQRLVVTKDGKRMPATEVLLNTPYISELIRKGEISG 300 Query: 298 LPHVIQTGQQVGMITFQQS 316 + +I+ G VGM TF QS Sbjct: 301 IKDIIEKGASVGMHTFDQS 319 >UniRef50_Q8DLE1 Twitching mobility protein n=9 Tax=Cyanobacteria RepID=Q8DLE1_THEEB Length = 446 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 5/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDD----DQRA 58 ME++V + +H SD+H+ R+R RGR+E + D EE WL++ Q Sbjct: 97 MEQLVREAFEHGYSDIHVGVGEAPRFRDRGRLEITNYPVTD-EETFNYWLNELLTPQQIE 155 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + + D A R+R + F G ++ LRL+P LEQL P V +L Sbjct: 156 QFRTHLEYDGAYQYEGLCRVRINIFVALKGPAMVLRLIPVKILTLEQLNLPPVFKDLCHY 215 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLILVTG TGSGKSTTLAAMV Y+N HI+++EDP+E+++ S+R LI+QRE+G+H Sbjct: 216 HKGLILVTGPTGSGKSTTLAAMVDYINTEMQKHIISIEDPIEFVHQSRRSLIRQREVGIH 275 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + F + L+A+LREDPD+IL+GE+RD ET+ AL AA+TGHLV TLHT A + +ER++ Sbjct: 276 TLKFDNALKASLREDPDIILIGEMRDRETVNTALKAAQTGHLVFGTLHTNSAVKTIERIL 335 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + + E+ P+R Q+A SL AV++Q L R A+ E++INT A+ + I G+ ++ Sbjct: 336 NLYNPDEQGPMRMQVAESLVAVIAQALVRTTDGKRAAIHEIMINTDAIKDYILRGEVEEI 395 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +I GM T Q GR+ Sbjct: 396 EAIIPQCTYDGMCTMNQCLYELYEAGRI 423 >UniRef50_C1RHW7 Pilus retraction protein PilT n=3 Tax=Actinobacteridae RepID=C1RHW7_9CELL Length = 378 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 137/331 (41%), Positives = 202/331 (61%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLRE----WLDDDQ 56 M ++E++ V+ SD H + P R+ G ++ P + + LR L Q Sbjct: 1 MPIDEVLREMVRLGASDAHFTTGSPPMVRLSGALQPLEQFGPVMPDGLRRSLYAILTQKQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R E +LD + ++ R R + + QR I A R++P LE+LG P V+ Sbjct: 61 RERYEEELELDVSYAVRGLARFRVNVYQQRESIGAAFRVIPYEIKPLEELGVPAVVGTFA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GL+LVTG TGSGKSTTLA+++ N+ HI+T+EDP+E+L+ ++ L+ QRE+G Sbjct: 121 GLPRGLVLVTGPTGSGKSTTLASIIDLANRTRQDHIMTVEDPIEFLHRHKKSLVNQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ L+ LR+DPD+IL+GE+RD ETI +ALTAAETGHLV ATLHT+ AAQ ++R Sbjct: 181 ADTHSFANALKHVLRQDPDIILVGEMRDLETISVALTAAETGHLVFATLHTQDAAQTIDR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKT 295 ++D FP+ ++ VR QLAG+++AV+ Q L + GR E+L+ TPA+ NLIREGKT Sbjct: 241 VIDVFPSHQQAQVRTQLAGAIQAVVCQTLCKRADGPGRAVATEVLVATPAIRNLIREGKT 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ +Q G + GM T Q V +G++ Sbjct: 301 HQIYSSMQAGAKQGMHTMDQHLADLVKQGKI 331 >UniRef50_C4ZCI9 Predicted ATPase involved in pili biogenesis, PilT-like protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZCI9_EUBR3 Length = 360 Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 133/316 (42%), Positives = 201/316 (63%), Gaps = 7/316 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP-----FDTPDVEELLREWLDDD 55 M + +I+ + + N SD+H+ P RI G++ P + + LL + + Sbjct: 9 MQIVDILKAAQQQNSSDIHIVPGNPVMLRIDGKL--VPQGNQVLTNVETDNLLSPIVPQE 66 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 + L E G+LDFA S+ R+R + F QR + ALR+L P +QLG P + L Sbjct: 67 LKDELKEKGELDFAFSVEGFSRVRANVFRQRGSYAAALRILSYDVPTPQQLGIPQSVVNL 126 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 GL+LVTGATGSGKSTTLA+++ + +I+TLEDP+EYL++ +R +++QRE+ Sbjct: 127 TTKMRGLVLVTGATGSGKSTTLASLIDVIASRDSKNIITLEDPIEYLHSRRRSIVEQREV 186 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +++A+ LRAALR+DPDVIL+GE+RD ETI A+TAAETGHLV +TLHT ++ A++ Sbjct: 187 GKDTLSYAAALRAALRQDPDVILVGEMRDLETISTAITAAETGHLVFSTLHTNSSSDAID 246 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R++D FP ++ +R QL+G L +++Q L GR+A FE+L+ A+ NLIRE K Sbjct: 247 RMIDVFPPHQQQQIRVQLSGVLEGIVAQHLLPMVNGGRIAAFEVLLANNAIRNLIREAKA 306 Query: 296 HQLPHVIQTGQQVGMI 311 Q+P +IQT ++ GM+ Sbjct: 307 FQIPSIIQTSKREGMM 322 >UniRef50_B9Y805 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y805_9FIRM Length = 368 Score = 243 bits (621), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 5/317 (1%) Query: 14 NVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQRAILLENGQLDFAV 70 + +DLHL P R+ G + P D+ +L ++ Q+ + G LDF Sbjct: 23 DCTDLHLTVGLPVVARMLGELTILGDEPLTKEDIHSMLATVMNRTQQE-EYQKGDLDFGF 81 Query: 71 SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATG 130 +R +A+ Q+ ALRLL + P + L P + +L GL+LVTG TG Sbjct: 82 QDTHGYSVRVNAYYQKGNPCAALRLLRNTIPSFDDLMIPEAVRKLSTLPRGLVLVTGPTG 141 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGKSTT+AAM+ ++ AHI+T+EDP+EY + ++ QRE+G+ +FA LR+AL Sbjct: 142 SGKSTTMAAMINSISHERKAHIITIEDPIEYRFEHASSVVHQREVGVDVASFADALRSAL 201 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 REDPDVIL+GE+RD ETI+ A+ AAETGHLV++TLHT A ++R++D FP ++ +R Sbjct: 202 REDPDVILVGEMRDFETIQAAIRAAETGHLVISTLHTNSAVSTIDRIIDVFPEAQQGQIR 261 Query: 251 NQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 QLA L+ V++Q+L V + Q GR+A FE+L+ A+ ++IRE K HQ+ V+QTGQ+ G Sbjct: 262 VQLASVLKGVVTQQLLVRQDQPGRLAAFEILLTNDAIASMIRENKAHQISSVLQTGQKAG 321 Query: 310 MITFQQSYQHRVGEGRL 326 M V EG++ Sbjct: 322 MRQMDYDLARLVQEGKI 338 >UniRef50_Q1IRV7 Twitching motility protein n=13 Tax=Bacteria RepID=Q1IRV7_ACIBL Length = 375 Score = 243 bits (621), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 131/316 (41%), Positives = 187/316 (59%), Gaps = 5/316 (1%) Query: 16 SDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLH+ + P + R+ G++ + AP + ++L + D Q+ E+ +LDF+ L Sbjct: 18 SDLHITTNSPPQVRVHGKLVPLDLAPLTPAETKQLAYSVMTDAQKHRFEEDLELDFSFGL 77 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSG 132 R R + F QR R++P +QLG P V+ +L GLIL+TG TGSG Sbjct: 78 KGLARFRANCFNQRGACGSVYRVIPFEIKNFDQLGLPAVVSKLCDRPRGLILITGPTGSG 137 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 KSTTLAAM+ +N HI+T+EDP+E+++ + CLI QRE+ F+ LRAALRE Sbjct: 138 KSTTLAAMIDKINIDRHEHIITIEDPIEFVHQHKNCLINQREVHSDTKGFSQALRAALRE 197 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 DPDV+L+GE+RD ETI AL AETGHL LATLHT A+ + R++D FP+ ++ +R Q Sbjct: 198 DPDVVLIGEMRDLETIESALRIAETGHLTLATLHTNSASSTINRIIDVFPSHQQSQIRAQ 257 Query: 253 LAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ-QVGM 310 L+ L ++ Q L GR E+L+ AV NLIRE K HQ+ +QTGQ + GM Sbjct: 258 LSLVLEGIMCQSLLPKVGGNGRAMAMEILVPNAAVRNLIREDKIHQIYSSMQTGQDKFGM 317 Query: 311 ITFQQSYQHRVGEGRL 326 TF Q+ V + ++ Sbjct: 318 QTFNQALATLVAQKQI 333 >UniRef50_C4XHR9 Putative twitching mobility protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XHR9_DESMR Length = 410 Score = 243 bits (620), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 139/321 (43%), Positives = 198/321 (61%), Gaps = 5/321 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRA 58 + +VA V+ NVSDLHL + PA R G++ F +++ELL D QR Sbjct: 3 KFKRLVASCVRSNVSDLHLRADKPAAARKNGQLHFQRDIVFSAAELDELLTSLTTDRQRR 62 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 IL E +DF+ L E+Q +R +AF G+ LA+R LP+ P E L L L Sbjct: 63 ILAERWSVDFSARLTESQ-MRLNAFHTADGLGLAVRFLPASAPSFEDLNLHPSLRALCAR 121 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLIL+ G TG+GKSTT+AAM+ +N+ AH++TLEDP+EY + S R LI QRE+G H Sbjct: 122 PFGLILICGPTGNGKSTTIAAMLREINETRPAHVVTLEDPIEYRFVSDRSLIDQRELGAH 181 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F GL+ LRED DVI++GELR+ ET+RL + AAE+GHLV+ATLH A +A+ RL Sbjct: 182 FQSFEQGLQDVLREDADVIVVGELREPETMRLTVNAAESGHLVIATLHAATAEEALLRLC 241 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG-RVALFELLINTPAVGNLIREGKTHQ 297 ++F +D VR+QLA L AV+ Q LE + G R + + ++ PA+ N+IRE + +Q Sbjct: 242 NAFAPDTQDFVRSQLASCLCAVVVQHLEFLPKAGFRAPVLSMAVSAPALRNIIRENRFNQ 301 Query: 298 LPHVIQTGQQVGMITFQQSYQ 318 + ++ Q G+ GM TF++ Q Sbjct: 302 IENLQQAGRADGMFTFERYRQ 322 >UniRef50_C7RKW6 Twitching motility protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKW6_9PROT Length = 368 Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 140/310 (45%), Positives = 189/310 (60%), Gaps = 4/310 (1%) Query: 11 VKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQRAILLENGQLD 67 V SDLHL P WR+ G M A + + ELL L Q+ L + G +D Sbjct: 23 VDKQASDLHLAGGRPPYWRLHGAVAPMSATVWPHAAMHELLTALLAAGQQRDLADKGSVD 82 Query: 68 FAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTG 127 + +R R + F ++LA R LP+ C +L P L +L +GL+LVTG Sbjct: 83 LGYTSRAGERFRINVFRSLGELALAARHLPARCASFTELRLPESLRDLAHLASGLVLVTG 142 Query: 128 ATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLR 187 TGSGKSTTLA ++ +N AHILT+EDPVE+++ + +I RE+ FA +R Sbjct: 143 ITGSGKSTTLATLINEINSTMPAHILTIEDPVEFVHRPAQAIITHRELHTDVPDFAGAVR 202 Query: 188 AALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKD 247 AALREDPDVIL+GELRD++T+R AL AAETGHLVL+TLHT A AVER V +FP QE+ Sbjct: 203 AALREDPDVILVGELRDNDTMRAALMAAETGHLVLSTLHTADATGAVERFVGAFPGQEQS 262 Query: 248 PVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 VR++L+ L+AV++Q+ L + GRVA E+L TPAV NLI G+T Q+ I++G+ Sbjct: 263 VVRHRLSLVLKAVIAQQLLPAVGRAGRVAAVEVLQVTPAVANLIASGRTAQIYSAIESGR 322 Query: 307 QVGMITFQQS 316 GM TF Q+ Sbjct: 323 DSGMQTFDQA 332 >UniRef50_B9XBG1 Twitching motility protein n=1 Tax=bacterium Ellin514 RepID=B9XBG1_9BACT Length = 362 Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 126/330 (38%), Positives = 201/330 (60%), Gaps = 13/330 (3%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAI----- 59 +I+ L+ SD+H+ P +RI + A P EW+++ + I Sbjct: 6 KILKLAHDGAASDIHIKVGTPVVFRINRSLVAIECPIPT-----EEWMNNVVKNIVPVHL 60 Query: 60 ---LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 L E + DF+ + R R + F QR +LA+RL+ ++ P E LG P V+ ++ Sbjct: 61 HKKLEEERETDFSYLEPGSGRFRTNVFQQRGSFALAMRLVKANVPSFETLGLPDVIKKIA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +S G++L+ G+TGSGKSTTLAAM+ ++N + HI+TLEDP+EY++ +C+I+QRE+G Sbjct: 121 ESPRGIVLLAGSTGSGKSTTLAAMIEHVNAVSKKHIVTLEDPIEYVFEDNQCVIEQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 L +F L++ALR+DPD+I++GE+RDS + A++AA+TGHLVL+TLHT A Q+V R Sbjct: 181 LDTRSFQGALKSALRQDPDIIMVGEMRDSVSFSAAMSAADTGHLVLSTLHTTTAGQSVGR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 ++D F A E++ +R Q+AG+L+AV+ Q++ E++INT V +I + + Sbjct: 241 ILDFFQADEREQIRRQIAGTLQAVICQRMVPTLTGTMTPACEIMINTSTVKKMIEDNRIE 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +L I+TGQ GM F Q+ V EG++ Sbjct: 301 KLHAAIETGQDDGMQNFNQALFALVKEGKI 330 >UniRef50_B4CW85 Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW85_9BACT Length = 365 Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 126/318 (39%), Positives = 200/318 (62%), Gaps = 3/318 (0%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE---ELLREWLDDDQRAILLENGQL 66 +V+ SD+HL P +RI G + P E +L + + D R L ++ ++ Sbjct: 11 AVQAGASDVHLKVESPVIFRITGDLVPVEAPLPTAEWFTGVLAKIVPDYLRVRLEQDHEV 70 Query: 67 DFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVT 126 DFA SL R R + + QR G +ALR++ + E+L P V+P++ ++ +G++L+T Sbjct: 71 DFAYSLPGVGRFRINVYQQRSGYVMALRVVKAKVRLFEELHLPPVIPKIAEATHGIVLIT 130 Query: 127 GATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGL 186 GATGSGKSTTLAAM+ ++N A HI+TLEDP+E+++ ++ +I+QRE+G+ TF +GL Sbjct: 131 GATGSGKSTTLAAMIEHINITAKKHIITLEDPIEFIFEDKQSVIEQREVGIDTGTFTTGL 190 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 + LR+DPDVI++GE+RDS ++ A++AA GHLV+ATLHT AA++++R+++ FP ++ Sbjct: 191 KNVLRQDPDVIVIGEMRDSSSVTAAISAANIGHLVVATLHTVDAAKSIQRILEFFPGPDR 250 Query: 247 DPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +P R QLA +L +V+ Q+L Q V E+L+NT AV LI G ++ I+ G Sbjct: 251 EPTRQQLATTLHSVVCQRLVRTPQNVIVPAVEVLLNTAAVAKLIHGGNLDKIIGAIELGT 310 Query: 307 QVGMITFQQSYQHRVGEG 324 GM TF Q+ + G Sbjct: 311 GDGMQTFDQALYNMAKAG 328 >UniRef50_B8GL39 Twitching motility protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL39_THISH Length = 364 Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 129/306 (42%), Positives = 193/306 (63%), Gaps = 6/306 (1%) Query: 16 SDLHLCSAWPARWRIRGRMEAAPF---DTPDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLHL P R+ G + F ++E + E L QR + LDF+ Sbjct: 17 SDLHLAVGVPPMLRMNGDLMPIKFRDLGERELEAYVLEILTPTQRKRFRDGEDLDFSYVA 76 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSG 132 E R R + F + G+ R +P+ PQL++LG P+V+ EL++ G++LVTG+TG+G Sbjct: 77 EEVGRFRVNLFRKATGVGATFRHVPATVPQLDELGLPSVVHELIEHHQGMVLVTGSTGTG 136 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 KSTTLAA++ ++N +IL+LEDP+E+++ S++ + QRE+G H ++A GLRAALRE Sbjct: 137 KSTTLAAIIDHINNRRAVNILSLEDPIEFVHHSKKAQVIQREVGTHVQSYADGLRAALRE 196 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 DPDVIL+GELRDSE+I +A+ AAETGHLVL TLHT A + ++R++D+ P + ++ + Sbjct: 197 DPDVILVGELRDSESITMAMIAAETGHLVLGTLHTTSAVKTIDRILDAIPIELREQGKTF 256 Query: 253 LAGSLRAVLSQKLEVDKQE--GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 L+ +L VL+Q L V K + GR A+ E L+ T A+ +I K HQ+P +QTG+ GM Sbjct: 257 LSQNLHGVLTQNL-VKKADGRGRQAVVESLVVTRAIAKMIMTDKVHQIPSQMQTGRDRGM 315 Query: 311 ITFQQS 316 Q+ Sbjct: 316 QLLDQA 321 >UniRef50_A1SFQ7 Twitching motility protein n=31 Tax=Bacteria RepID=A1SFQ7_NOCSJ Length = 430 Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 133/331 (40%), Positives = 199/331 (60%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP-FDTPDVEELLREW---LDDDQ 56 +++++++ ++ SDLHL + P R+RG MEA + T D E+L R + + Q Sbjct: 69 LSLDDLLIHVLRVGASDLHLTTGAPPTVRLRGEMEAIEGYPTLDGEQLRRTLYGVMTERQ 128 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R + E +LDFA ++ + R R + F QR + +R++P LE LG P + Sbjct: 129 RKVFEEELELDFAYAVPGHARFRVNVFQQREHLGAVMRMIPWEIVPLEDLGMPEAVAGFS 188 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + GL+LVTG TGSGKSTTLAA++ +N+ HI+T+EDP+E+L+ + CL+ QRE+G Sbjct: 189 DLKRGLVLVTGPTGSGKSTTLAAIIDRINRTRRGHIVTIEDPIEFLHEHRGCLVNQREVG 248 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 F L+ LR+DPDVIL+GELRD +TI +ALTAAETGHLV ATLHT+ A + R Sbjct: 249 SDTHGFRDALKHVLRQDPDVILVGELRDLDTISVALTAAETGHLVFATLHTQSAQDTITR 308 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKT 295 +VD FPA+++ VR QLA +L+ V+ Q L + +GR A E+++ + +IR+ K Sbjct: 309 VVDVFPAEQQQQVRTQLAATLQGVVCQTLVKTADDQGRAAAVEVMVCNSGIRAMIRDDKL 368 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ +Q G + GM T V GR+ Sbjct: 369 QQIQGALQAGARDGMQTLNAHLAALVKAGRI 399 >UniRef50_B2V7T3 Twitching motility protein n=8 Tax=Bacteria RepID=B2V7T3_SULSY Length = 372 Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 132/334 (39%), Positives = 213/334 (63%), Gaps = 11/334 (3%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM----EAAPFDTPDVEELLREWL--DD 54 M ++EI+ +VK SD+HL A + RI+ + E P D+ + + L + Sbjct: 1 MELDEILTKAVKLGASDIHLKVASKPKVRIKTILQTLDEYNPITVEDMTNFISKILAKSE 60 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 +++A L++NG++D + S+ R R + + QR ++ALR L ++ P+ E+L P V+ + Sbjct: 61 NKKAELIKNGEVDISYSIPTVSRFRVNIYRQRGTYAIALRALKTNIPRFEELLLPEVIRK 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + + GL+LVTG TGSGKSTTLA+M+ Y N+ + I+T+EDP+EY++ ++ I QRE Sbjct: 121 IAEEARGLVLVTGPTGSGKSTTLASMLDYRNEIFEETIITIEDPIEYVFRDKKAYIVQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 + L F++GLRAALREDPDVI++GE+RD ETI+ AL AAETGH VL+TLHT+ A + Sbjct: 181 VDLDTRDFSTGLRAALREDPDVIMVGEMRDLETIQTALRAAETGHFVLSTLHTQDAKDTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGR--VALFELLINTPAVGNLIRE 292 R+++ FP +E++ +R LA L+AV+SQ+L + +++G+ V E+LINT A+ I + Sbjct: 241 SRIINMFPGEEQNHLRILLAAVLKAVISQRL-IPRKDGKGVVPAVEVLINTGAITECIMD 299 Query: 293 -GKTHQLPHVIQTGQQV-GMITFQQSYQHRVGEG 324 K + ++ G+++ GM TF Q+ +G Sbjct: 300 PDKLLLINDYMEKGKKMYGMQTFDQAVVDLYNQG 333 >UniRef50_C4Z961 Predicted ATPase involved in pili biogenesis, PilT-like protein n=5 Tax=Bacteria RepID=C4Z961_EUBR3 Length = 358 Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 191/322 (59%), Gaps = 7/322 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA------APFDTPDVEELLREWLDD 54 M++++I+ + + SD+ + + P ++ +G ME P +T + + + Sbjct: 6 MDVKKILKEATDNGASDIFIVAGRPLTYKSKGVMECLNEIRMIPKETFEFVTSIYALAER 65 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 D E G DF+ ++ R R S F QR S +R++ P+ L P + E Sbjct: 66 DISK-FEETGDDDFSFAIPGVSRYRVSTFKQRGSYSAVIRVISFTLPKPSDLHIPDSVME 124 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L ++ NG++LVTG GSGKSTTLA ++ +N + HI+TLEDP+E+L+ +C++ QRE Sbjct: 125 LAETNNGMVLVTGPAGSGKSTTLACIIDQINHEKEEHIITLEDPLEFLHRHDKCIVSQRE 184 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 I ++ + LRAALR+ PDVILLGE+RD ETI A+TAAETGHL+ ++LHT GAA + Sbjct: 185 INTDTESYLTALRAALRQSPDVILLGEMRDYETINTAVTAAETGHLIFSSLHTIGAANTI 244 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 +R++D+FPA ++ + QLA L+AV+ QKL V FE+++ TPA+ NLIREGK Sbjct: 245 DRIIDAFPASQQHQIAIQLASVLQAVVCQKLLPATNGEMVPAFEIMVLTPAIRNLIREGK 304 Query: 295 THQLPHVIQTGQQVGMITFQQS 316 HQ+ +I T MI S Sbjct: 305 VHQIDGIIYTSAAENMIAMDTS 326 >UniRef50_A0RMV4 Twitching motility protein PilT n=6 Tax=Epsilonproteobacteria RepID=A0RMV4_CAMFF Length = 398 Score = 238 bits (607), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 185/313 (59%), Gaps = 21/313 (6%) Query: 16 SDLHLCSAWPARWRIRGRMEAAPFDTPDV----------EELLREWLDDDQRAILLENGQ 65 SDLH+ + R R++G E P V +ELLR ++ L+E Sbjct: 31 SDLHVKAEGIIRKRVKG--EIVPISNRRVLSSKEAITLAKELLRGRFNE-----LVEKKS 83 Query: 66 LDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS-ENGLIL 124 +DF ++ R R + F Q G+S R +P+ P ++LG P + + K G+IL Sbjct: 84 VDFTYKFNDDYRFRVNTFFQMDGVSFVFRTIPTKLPTFDELGLPNAVEHMCKEIYRGIIL 143 Query: 125 VTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFAS 184 VTG TGSGK+TTLA+M+ Y+N++ +HI+T+EDP+E++Y + C+I QR IG FA Sbjct: 144 VTGPTGSGKTTTLASMINYINKNRKSHIITIEDPIEFVYKDENCIINQRSIGQDTTNFAD 203 Query: 185 GLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQ 244 LR ALREDPD+IL+GE+RD ETI +A+ AAETGHLVL+TLHT A + R++ FP Sbjct: 204 ALRGALREDPDIILVGEMRDLETIEIAMHAAETGHLVLSTLHTVDAKDTIGRIISMFPGN 263 Query: 245 EKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH--V 301 E++ ++ LA L+ ++SQ+L + GRVA E+++ TP + NLI E + + + + Sbjct: 264 EQNRIKLSLASVLKGIISQRLCKRADGSGRVAALEIMLATPRIKNLILENRASDMIYDAI 323 Query: 302 IQTGQQVGMITFQ 314 ++ GM TF Sbjct: 324 AESSANSGMQTFD 336 >UniRef50_B2KCH7 Twitching motility protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCH7_ELUMP Length = 362 Score = 237 bits (604), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 193/310 (62%), Gaps = 4/310 (1%) Query: 11 VKHNVSDLHLCSAWPARWRIR---GRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLD 67 V + S LHL + R+ ++E + +V ++ + D ++ I ENG +D Sbjct: 13 VDNKASGLHLRGNSFSFVRLNRQIKQIEDSFLSNDEVRKIAYACMSDREKKIFEENGTVD 72 Query: 68 FAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAP-TVLPELLKSENGLILVT 126 F++ EN R R + + Q + +++R +P P L P VL ++ ++ GL+LVT Sbjct: 73 FSLDAKENGRFRFNVYRQSGKVCISIRHIPLKIPTFADLNLPGDVLEKITENRRGLVLVT 132 Query: 127 GATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGL 186 G TGSGKS+TLAAM+GY+N+ HILT+EDP+E+++ ++C++ Q +GL ++ + L Sbjct: 133 GMTGSGKSSTLAAMLGYINRARRGHILTIEDPIEFVHTEEKCIVSQLALGLDTHSYMAAL 192 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 RA++R+DPDVI++GELRDS+ +R A+ AAETGHLV T+HT A Q + RL+ SFP +++ Sbjct: 193 RASMRQDPDVIMIGELRDSDVVRAAIAAAETGHLVFTTVHTVDAVQTLNRLIQSFPFEQQ 252 Query: 247 DPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 V+ QLA ++ ++SQ+L D + G + E++++TP + LI +GK ++ I G+ Sbjct: 253 AQVKVQLAELIKGIVSQRLLPDLKGGMIPAVEVMVDTPQIKKLITDGKIDEVSRHIGMGE 312 Query: 307 QVGMITFQQS 316 GM TF QS Sbjct: 313 YYGMQTFDQS 322 >UniRef50_Q2JR70 Twitching mobility protein PilT n=32 Tax=Cyanobacteria RepID=Q2JR70_SYNJA Length = 455 Score = 237 bits (604), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 131/328 (39%), Positives = 197/328 (60%), Gaps = 3/328 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEEL---LREWLDDDQRA 58 + ++V + + SD+HL R+R RG++ + E LRE L ++Q Sbjct: 105 TLRQLVQEAYEKGYSDIHLGVGEVPRFRDRGQIVIGNYPVTTTEVFYSWLRESLPENQIR 164 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 E +LD A+ R R + F G ++ LRL+P LEQL AP VL + + Sbjct: 165 QFEECLELDTAIQYEGLVRCRVNCFVSLLGPAMVLRLIPLKILTLEQLRAPEVLKRIAEE 224 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAMV Y+N + HI+++EDP+E+++ S++ L++QRE+G+H Sbjct: 225 HKGLVLVTGPTGSGKSTTLAAMVDYINSNFAKHIISIEDPIEFVHQSKKSLVRQREVGIH 284 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + FA+ L+A+LREDPD+IL+GE+RD ET+ AL A +TGHLV TLHT A + +ERL+ Sbjct: 285 TLEFANALKASLREDPDIILIGEMRDRETVDTALKAGQTGHLVFGTLHTNSAVRTIERLL 344 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + +E++P+R QLA +L A+++Q L R A E++ NT A+ + I+ G ++ Sbjct: 345 GIYRPEEQEPMRLQLAETLVAIIAQTLVRTTDGKRTAAHEIMRNTDAIRDYIKRGAVDEI 404 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +I G GM T QS EGR+ Sbjct: 405 EELIADGSYEGMCTMNQSLFRLYQEGRI 432 >UniRef50_B4D003 Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D003_9BACT Length = 359 Score = 236 bits (602), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 132/316 (41%), Positives = 189/316 (59%), Gaps = 10/316 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEE-----LLREWLDDDQR 57 +++ + V SDLHL P + R G E P ++ ++ E D+ Sbjct: 4 IDQFFEVLVNAGASDLHLAEGQPPKIRRHG--EVMPIRNEELTNEEMAYMMSEIAGPDRW 61 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 A LE G LDFA + E+ R R + Q G RL+P+ L+QLG P V+ E Sbjct: 62 ARYLEVGDLDFAYEMDEHSRFRCNYLKQTRGFGCVFRLIPTKILTLDQLGIPPVVKEFGH 121 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAA++ Y+N + HI+T+E+P+E+++ +++ +I QRE+ Sbjct: 122 LRGGLVLVTGPTGSGKSTTLAALIDYINVNFTRHIITVEEPIEFVHKNKKSIITQREVPE 181 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 + +F GL+AALRED D++L+GE+RD ETI+LALTAAETG LV TLHT A + V+R+ Sbjct: 182 NTPSFPQGLKAALREDADIVLVGEMRDLETIQLALTAAETGLLVFGTLHTNNARKTVDRM 241 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE---GRVALFELLINTPAVGNLIREGK 294 +D FP+ ++ VR LA SLR V++Q L E GR+A+ E+L+ A +IREG Sbjct: 242 IDVFPSDQQAQVRTMLAASLRGVVAQLLLKKTAEVGGGRLAVNEILVVNSAASAIIREGA 301 Query: 295 THQLPHVIQTGQQVGM 310 T +L VI G GM Sbjct: 302 TQKLQDVIVAGGGSGM 317 >UniRef50_A7I2W5 Twitching mobility protein n=7 Tax=Epsilonproteobacteria RepID=A7I2W5_CAMHC Length = 402 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 128/310 (41%), Positives = 183/310 (59%), Gaps = 6/310 (1%) Query: 11 VKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAILLENGQLD 67 VKH SDLH+ S R RI G + F D +L +E L + L+EN +D Sbjct: 31 VKHGGSDLHIKSNSVIRGRINGELVKFSTQIFTAADGIQLAKELLLTRFKE-LVENKSID 89 Query: 68 FAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL-KSENGLILVT 126 F SL + R R + F Q GIS R +P P +E+L P L ++ ++ G+IL+T Sbjct: 90 FTYSLNSDYRFRVNIFFQIDGISAVFRTIPVKIPTIEELKLPKTLGKICDETTRGIILLT 149 Query: 127 GATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGL 186 G TGSGK+TT+A+M+ +N +HI+T+EDPVE+++ +C+I QR +G C TFA L Sbjct: 150 GPTGSGKTTTIASMINRINHQRTSHIVTIEDPVEFVFKDDKCIINQRALGEDCNTFADSL 209 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 RAALREDPD+I +GE+RD TI AL AAETGHLV +TLHT A + + R++ F E+ Sbjct: 210 RAALREDPDIIFVGEMRDLVTIETALNAAETGHLVFSTLHTVDAKETIGRIIGMFEPSEQ 269 Query: 247 DPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 + ++ LA L AV+SQ+L RVA+ E+L + ++I EG+ ++ I G+ Sbjct: 270 ERIKMTLAAVLEAVISQRLAKTVDGKRVAVVEILRKNTRIKDMILEGRDGEITDAIADGK 329 Query: 307 QV-GMITFQQ 315 GM TF Q Sbjct: 330 NTYGMQTFDQ 339 >UniRef50_A6W7B3 Twitching motility protein n=6 Tax=Bacteria RepID=A6W7B3_KINRD Length = 396 Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 138/316 (43%), Positives = 192/316 (60%), Gaps = 8/316 (2%) Query: 16 SDLHLCSAWPARWRIRGRMEA--APFDTPDV-EELLREWLDDDQRAILLENGQLDFAVSL 72 SDLH + P R RI GR+ A AP T DV E +L + L D + DFA SL Sbjct: 54 SDLHCKAGSPPRIRIDGRLRALQAPALTADVTERMLEQILRPDLVEEFARTHEADFAYSL 113 Query: 73 AENQ-RLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGS 131 R R +AF QR + L LR + + L LG P V+ +L GL+LVTG TGS Sbjct: 114 PHGAGRFRVNAFRQRGSVGLVLRRVAAQAVPLAGLGVPPVIEQLALEHRGLLLVTGPTGS 173 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTLA M+ ++N ++HI+T+EDP+E L+ R +I QRE+ L F + LRAA+R Sbjct: 174 GKTTTLAGMIDHINTVRESHIVTIEDPIEVLHTDNRSMISQREVRLDTADFTTALRAAMR 233 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 +DPDVIL+GE+RD ET++ AL+AAETGH V++TLHT AA+ + R++D FP E+ VR Sbjct: 234 QDPDVILVGEMRDQETVKAALSAAETGHFVMSTLHTIDAAETIARIIDFFPPHEQKQVRL 293 Query: 252 QLAGSLRAVLSQKLEVDKQE--GRVALFELLINTPAVGNLIRE-GKTHQLPHVIQTGQQV 308 LAGSLR ++ Q+L V + + GR + E+ +NT + + I + KT Q+ +I+ GQ Sbjct: 294 ALAGSLRGIVCQRL-VPRADGAGRCVVMEVCVNTGRIADAISDPDKTSQITDLIREGQYY 352 Query: 309 GMITFQQSYQHRVGEG 324 M TF Q V +G Sbjct: 353 RMQTFDQHLVALVRDG 368 >UniRef50_C9KK06 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK06_9FIRM Length = 349 Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 200/325 (61%), Gaps = 8/325 (2%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRG------RMEAAPFDTPDVEELLREWLDDDQRAI 59 I+ +++ +D++L R+ G R E P D +E + L QR Sbjct: 12 ILMEAIEACANDIYLTVGQAVWLRVDGSLCRLSRAEWQP-DDAFMESMAEVLLSPAQRES 70 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L E +DF+++ A +RLRG+ + Q+ +++ LRLLPS P L + AP L LL++ Sbjct: 71 LREGHAIDFSLAHA-GRRLRGNLYRQQAHLAMVLRLLPSSIPTLAAIHAPQALQGLLEAR 129 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGK+TT+A+ + +N+ AHILTLEDP+EY++ RC I QRE+G Sbjct: 130 QGLVLVTGRTGSGKTTTMASFLQAVNESRAAHILTLEDPIEYVFTPSRCFISQRELGRDF 189 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F LR+ALRE PD++L+GE+RD ET+ AL AAETG LVL TLHTRGAA+AV R+ Sbjct: 190 RSFPEALRSALREMPDILLVGEIRDCETMTTALAAAETGMLVLGTLHTRGAAEAVRRIEG 249 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 + +++ VR Q+A A+ +Q+L ++EGRV L E+L+ P+V +LIR+GK Q+ Sbjct: 250 FYLQEQQSIVRAQVADVFCAIFAQELLPARKEGRVPLVEVLLREPSVASLIRQGKYSQIE 309 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEG 324 + T Q GM T Q+ Q + +G Sbjct: 310 MAMMTHQAQGMQTRAQALQKLLQQG 334 >UniRef50_A7A8S6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A7A8S6_BIFAD Length = 601 Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 130/319 (40%), Positives = 189/319 (59%), Gaps = 5/319 (1%) Query: 11 VKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQRAILLENGQL 66 VK N SDLHL P R+ G++ A + E ++ ++ + ++ +L Sbjct: 256 VKLNASDLHLVINDPPMLRVDGKLRPAKGLSVWTKDHTYEAVKVMTNELEMERFKDDLEL 315 Query: 67 DFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVT 126 D + ++ + R R + + R G+ ALR +P+ ++LG + +L GL+LV Sbjct: 316 DISFAIGDLLRFRVNVYRDRMGVCAALRTIPTEIKTAQELGIDPRIADLALLPRGLVLVC 375 Query: 127 GATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGL 186 G TGSGKSTTLAA+V N HI+T+EDP+E+++ +RC++ QRE+G +FA L Sbjct: 376 GPTGSGKSTTLAAIVDKANAERADHIITIEDPIEFVHQHKRCVMSQREVGTDTKSFAEAL 435 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 + ALREDPD+I +GELRD ETI ALTA ETGHLV ATLHT+ A V+RL+D +P ++ Sbjct: 436 KRALREDPDIIEVGELRDLETISTALTAVETGHLVFATLHTQDAGSTVDRLIDVYPENQQ 495 Query: 247 DPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +R Q+A +LRAV+ Q L GR E++IN PAV LIR GK HQ+ V+Q+G Sbjct: 496 QQIRVQVASTLRAVIVQTLIPRASGHGRAPATEVMINNPAVAALIRSGKAHQIRTVLQSG 555 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ GM T Q V +G Sbjct: 556 EKEGMHTLDQDLARLVNKG 574 >UniRef50_A6GE25 Twitching motility protein n=2 Tax=Proteobacteria RepID=A6GE25_9DELT Length = 530 Score = 233 bits (594), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 145/331 (43%), Positives = 197/331 (59%), Gaps = 9/331 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQRAI 59 + E++ +V +D+ L + R+ G + A F D++ E L QR + Sbjct: 180 LAELLERAVLQRATDVFLSARGEVHLRVGGNIVELADANFGALDLDAAFGE-LPGHQREL 238 Query: 60 LLENGQLDFAVSLAENQ---RLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 L +G +DFA R R + F Q G++ ALR + + P L +LG L L Sbjct: 239 LATSGSVDFAALAGYGPTALRFRVNLFRQLGGLAAALRPVRRNPPTLRELGLGGELDSLT 298 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +GL+L+TG GSGKSTTL A++ +N+ A HI+TLEDP+EY+Y R LI QRE+G Sbjct: 299 AHRDGLVLMTGPAGSGKSTTLVALLEAINRSAPKHIITLEDPIEYVYPPGRALIHQRELG 358 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +H +F +GLRAALRE PD+IL+GE+RD ETI+ ALTAAETGHLVL+TLH AA A+ R Sbjct: 359 VHVESFQAGLRAALRESPDIILVGEMRDPETIQAALTAAETGHLVLSTLHCSDAASAIHR 418 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELL-INTPAVGNLIREGKT 295 +VD+FP VR QLAGSLRAV++Q L + V +EL+ +NTP V IR+ + Sbjct: 419 IVDAFPEHRHALVREQLAGSLRAVVTQLLLPGLRSPLVPAYELMRVNTP-VATKIRDSRA 477 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQL IQ G+Q GMI + V E RL Sbjct: 478 HQLRSEIQKGRQDGMIALEAVLARLVRERRL 508 >UniRef50_Q2LRM4 Pili retraction protein n=11 Tax=Bacteria RepID=Q2LRM4_SYNAS Length = 404 Score = 233 bits (593), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 129/318 (40%), Positives = 191/318 (60%), Gaps = 15/318 (4%) Query: 9 LSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTP-------DVEELLREWLDDDQR--AI 59 L NVSDL++ P + G++ A FD P E + ++ D+R Sbjct: 28 LDAYDNVSDLNMTVGKPFQVESSGQLTAVDFDPPCEKLTPFQTETIALNLINGDRRLTET 87 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L+ G D + +L R R + F+QR S+ LR L + P L+ L P ++ + + Sbjct: 88 LVAEGSCDSSYTLQGKARFRVNIFSQRGNYSIVLRKLETRIPTLQDLNLPEAFEKMAQEK 147 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 NG+ILVTGATGSGKST+LAAM+ +N+ H++TLEDPVE+++ ++ QRE+G Sbjct: 148 NGIILVTGATGSGKSTSLAAMLNEINERKSVHVVTLEDPVEFVHPHKQATFNQREMGTDF 207 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 TFA+GLRAALR+ P VIL+GE+RD ET+ +AL+AAETGHLV++TLHT A Q + R++ Sbjct: 208 DTFANGLRAALRQAPKVILVGEMRDRETVEIALSAAETGHLVVSTLHTVDAGQTINRILG 267 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLI----REGKT 295 F +E+ +R +LA ++R ++ Q+L + GRVA FE++ N V + I EGKT Sbjct: 268 MFSIEEERQIRIRLADTVRWIVCQRLLPKEGGGRVAAFEVMGNNLRVKDTILNGESEGKT 327 Query: 296 HQLPHVIQTGQQVGMITF 313 +IQ G+ GM+TF Sbjct: 328 --FYEIIQAGKAFGMVTF 343 >UniRef50_C3WJA3 Pilus retraction protein PilT n=2 Tax=Fusobacterium RepID=C3WJA3_9FUSO Length = 317 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 123/319 (38%), Positives = 199/319 (62%), Gaps = 10/319 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLE 62 ME+I + K+N+SD+H+ +R G + A D + L RE D I Sbjct: 1 MEKIFEYARKNNISDIHIIEGERIYFRKDGEIVAYE----DSQSLSRE----DILKICSG 52 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE-LLKSENG 121 + DFA + ++NQR R ++F + ++L +R++ +L+ V+ E +L ++G Sbjct: 53 KFEEDFAYTDSKNQRYRINSFFTKGKLALVIRVINDDAIKLKGEFINKVIDEKILALKDG 112 Query: 122 LILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMT 181 L+L++G TGSGKSTTLA ++ N++ ILT+EDP+EY++ +++ LI QRE+G + Sbjct: 113 LVLISGITGSGKSTTLANIIEKFNENKSIKILTIEDPIEYIFENKKSLIIQRELGTDVES 172 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 F L+++LR+DPDVI+LGE+RD E++ AL AETGHLV +TLHT A +++ RL+ Sbjct: 173 FEKALKSSLRQDPDVIVLGEIRDEESLFSALKLAETGHLVFSTLHTMNAVESINRLISMA 232 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQLPH 300 + ++D +R QLA LR + SQ+L DK+ +V A+FE+L NT AV NLI K +Q+P Sbjct: 233 KSDKRDFIREQLASVLRFIFSQELYRDKKTKKVKAIFEILNNTKAVANLIANNKLNQIPS 292 Query: 301 VIQTGQQVGMITFQQSYQH 319 +I++G + MIT ++ ++ Sbjct: 293 LIESGIENYMITKEKYFKK 311 >UniRef50_D2L8D4 Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L8D4_9DELT Length = 413 Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 129/315 (40%), Positives = 196/315 (62%), Gaps = 5/315 (1%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILL 61 ++V+ V++ ++DLH+ + P R G + FDT +++ LL+ + QR +L Sbjct: 6 KLVSTCVRNGITDLHIRTGQPVAVRKTGHLHFQREIVFDTAEMDALLKYVTTERQRRLLA 65 Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENG 121 E +DF+ ++ Q +R +AF G+ LA+R LPS P E L L EL +G Sbjct: 66 ERWSVDFSTCSSDAQ-MRLNAFYTADGLGLAVRFLPSVVPDFEALNLHPSLRELCSLHHG 124 Query: 122 LILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMT 181 LIL+ G TG+GKSTT+AAM+ +NQ AH++TLEDP+EY + S++ L+ QRE+G H + Sbjct: 125 LILICGPTGNGKSTTIAAMIREINQTRSAHVITLEDPIEYRFTSEKALMDQRELGAHFPS 184 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 F GL+ LRED DVI++GELRD ET+RL + AAE GHLV+ATLH +A+ RL ++F Sbjct: 185 FEQGLQDVLREDADVIMVGELRDPETMRLTINAAEAGHLVIATLHAGTPEEALLRLCNAF 244 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG-RVALFELLINTPAVGNLIREGKTHQLPH 300 +D R Q+A SL AV+ Q +E+ + G R + ++ +T +V N+IRE + +QL Sbjct: 245 GEGSQDFARAQIASSLGAVVVQHMEILARVGFRAPVLSIVRSTVSVKNIIRENRFNQLES 304 Query: 301 VIQTGQQVGMITFQQ 315 + Q G+ GM TF++ Sbjct: 305 IQQAGRGEGMFTFER 319 >UniRef50_B1ZN20 Twitching motility protein n=3 Tax=Verrucomicrobia RepID=B1ZN20_OPITP Length = 367 Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/331 (37%), Positives = 199/331 (60%), Gaps = 7/331 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 + +++ L+V VSD+ + + P R+ GR+ E P +P+ + + E + + R Sbjct: 11 INDLLKLAVDSGVSDVIIKANKPGYVRLAGRLKPVEMDPITSPEAQAFVDEHVPEVFRQK 70 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLG---APTVLPELL 116 +GQ+DFA ++ R R +AF QR +S+ +R + S P QLG A L L+ Sbjct: 71 WEASGQIDFAYAVESIGRFRVNAFHQRGLVSIVMRHIKSTVPTFAQLGLDFASEALVRLV 130 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 ++++G++LV GATGSGKS+T+AAM+ ++NQ+ D HI+T+EDP+EY + ++ L QQREIG Sbjct: 131 QAKDGILLVCGATGSGKSSTMAAMLNWVNQNMDKHIVTIEDPIEYTFQDEKSLFQQREIG 190 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 L +F ++A LR++PDVIL+GE+RD ET A++AAETGHLV +T+H AQ++ R Sbjct: 191 LDVSSFDEAIKAVLRQNPDVILIGEMRDRETFETAISAAETGHLVFSTMHAATVAQSLTR 250 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKT 295 L + FP +E+ R +AGSLR + QKL + GRV E+L V NLI EG+ Sbjct: 251 LFEFFPPEEQIQARRAIAGSLRGFICQKLIPALEGGGRVVTNEILTADAVVKNLILEGQF 310 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ +++ +F + + G++ Sbjct: 311 EKIQGILEGSGDSNSYSFNKDLYRLIKAGKI 341 >UniRef50_A4A7Z0 Twitching motility PilT family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A7Z0_9GAMM Length = 373 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 117/273 (42%), Positives = 177/273 (64%) Query: 44 VEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL 103 V+ + R D + E+G++DF++ + R RGSAF QR SL R + + P + Sbjct: 51 VDHIFRSIASDKKIMEFEEHGEVDFSLGVPNLGRFRGSAFRQRGETSLVFRYVRNDIPTV 110 Query: 104 EQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY 163 E+LG PTVL +L+ +NGL++V GATGSGKST+LAAM+ + N +A HILTLEDP+EYL+ Sbjct: 111 EELGLPTVLNDLVMEKNGLVVVVGATGSGKSTSLAAMIDHRNTNAAGHILTLEDPIEYLH 170 Query: 164 ASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLA 223 +R ++ QREIG+ ++++G+R+A+R P+VILLGE+RD ET+ L A TGHL L Sbjct: 171 NHKRSVVAQREIGVDTESYSTGIRSAMRSAPNVILLGEIRDHETMEFGLKFANTGHLCLT 230 Query: 224 TLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINT 283 TLH A A+ER++ FP +++ ++A +LR ++SQ+L G+ A E+L+NT Sbjct: 231 TLHANNAVSALERMMTFFPPEDQANEVVRIAQNLRGIISQRLVPTIDGGKCAAMEVLVNT 290 Query: 284 PAVGNLIREGKTHQLPHVIQTGQQVGMITFQQS 316 P V +LI + +L + I+ G + M TF Q+ Sbjct: 291 PRVQDLITKQDLTELRNTIEQGSKYQMRTFDQA 323 >UniRef50_Q1DAU3 Twitching mobility protein n=44 Tax=Bacteria RepID=Q1DAU3_MYXXD Length = 491 Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 130/331 (39%), Positives = 199/331 (60%), Gaps = 7/331 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM----EAAPFDTPDVEELLREWLDDDQ 56 M + EI+ ++++ SD+HL + P +R+ G + + +V + +++ Q Sbjct: 24 MELNEILQIALRGGASDIHLKAGLPPMFRVDGSLVPLKDGRRLPPEEVARMAFGIMNEFQ 83 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + + ++D A + R R + F QR + LR++P ++ L P +L ++ Sbjct: 84 KEKFKGSNEVDLAYGVPGLGRFRVNVFQQRGTVGAVLRVIPFKVMTIQDLLLPQILAKIC 143 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 E GL+LVTG TGSGKSTTLAAM+ Y+N + +HI+T+EDP+E+L +R ++ QRE+G Sbjct: 144 GEERGLVLVTGTTGSGKSTTLAAMIDYINANETSHIMTIEDPIEFLIRDKRSIVNQREVG 203 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + MTFA L++ALR+DPDVIL+GE+RD ETI AL AAETGHLV++TLHT A + + R Sbjct: 204 VDTMTFAQALKSALRQDPDVILVGEMRDHETIETALHAAETGHLVMSTLHTLDATETINR 263 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIRE-GK 294 +V +FP ++ VR QLA L+AV+SQ+L +GRVA E+L T V +I + + Sbjct: 264 IVSAFPPHQQKQVRLQLASVLKAVVSQRLVPRADGKGRVAAVEVLRVTARVREMIEDKDR 323 Query: 295 THQLPHVIQTGQQV-GMITFQQSYQHRVGEG 324 T ++ I G GM TF QS V +G Sbjct: 324 TKEIHDAIAQGTDTYGMQTFDQSLMSLVRQG 354 >UniRef50_Q31PZ1 Twitching motility protein n=5 Tax=Cyanobacteria RepID=Q31PZ1_SYNE7 Length = 370 Score = 230 bits (586), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 133/330 (40%), Positives = 193/330 (58%), Gaps = 6/330 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTP-----DVEELLREWLDDDQ 56 +E++V + + SD+HL P +R+R +M P + P D+ L E L Q Sbjct: 5 TIEQLVRKACQVQASDIHLRVGHPPYFRLREQMYPLP-NAPAATDSDMASWLNEILTPTQ 63 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + L E +LD A+ + R R F G+++ LRL+P P L L PTVL L+ Sbjct: 64 LSRLNETQELDEALFYPDLIRCRVICFQTLDGVAITLRLIPLQIPSLMDLQLPTVLSALI 123 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + + GLILVTG TGSGKSTTLAAM+ +NQ HI+T+EDP+EY++ RCLI QRE+G Sbjct: 124 QRKQGLILVTGPTGSGKSTTLAAMISEMNQSMARHIITIEDPIEYVFEPVRCLITQREVG 183 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 H F+S +RAALR DPDVIL+GE+RD +T++ A+ AA+TGHLVL TLH R A ++R Sbjct: 184 RHVHDFSSAVRAALRADPDVILVGEIRDQKTLKAAMHAAQTGHLVLGTLHARNAIATIDR 243 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 L+ + R Q L AV++Q+L R A+ E+LINTPA+ + + G+ Sbjct: 244 LIGLDGMVQSADTRKQFLELLVAVIAQQLITTYSGSRRAVLEVLINTPAIQDYLTRGELD 303 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +++ GM T ++ + +GRL Sbjct: 304 EAYRLMELDTIEGMQTLNEALITEIEQGRL 333 >UniRef50_C9RN76 Twitching motility protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RN76_FIBSS Length = 366 Score = 229 bits (584), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 124/322 (38%), Positives = 195/322 (60%), Gaps = 6/322 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 + +E+++ V SDLHL P +RI G R+ D+ ++ L + ++ DQ+ Sbjct: 4 LRIEQLLREMVNRKASDLHLRVGVPPVYRINGALQRLFDVRIDSAMMDSFLDDIMNRDQK 63 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 N + DFAV + R R + F QR I++ +R + + P E+L P ++ +L Sbjct: 64 QRFEANKECDFAVGARDMGRFRVNVFRQRGTIAVVIRHIKAVIPPFEELHLPEIIRDLAL 123 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LVTG TGSGKSTTLA+M+ Y+NQ +++T+EDP+EYLY +I QREIG+ Sbjct: 124 TRRGLVLVTGTTGSGKSTTLASMIDYINQKESVNVITVEDPIEYLYRDNVAIISQREIGV 183 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++A+ LRAALR+DPDV+L+GE+RD ET+++ALTAA+TGH+V AT+HT A + + R+ Sbjct: 184 DTLSYANALRAALRQDPDVLLVGEIRDLETMQIALTAADTGHMVFATIHTTNAVETIHRV 243 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIRE-GKT 295 + +P + D +R LA L ++S +L K +GRV E+L+NT A+ I++ K Sbjct: 244 LSMYPPHQHDEIRLLLAEVLVGIISLRLLPTKDGKGRVPAAEILVNTGAIKEYIQDKNKI 303 Query: 296 HQLPHVIQTGQ-QVGMITFQQS 316 + + G Q TF Q+ Sbjct: 304 DMVEQAVAEGHIQYHSQTFDQA 325 >UniRef50_D1Y3N0 Twitching mobility protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3N0_9BACT Length = 361 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 199/328 (60%), Gaps = 16/328 (4%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL----LENGQ 65 + + SD+HL +R+ GR+E + REWL R +L ++ + Sbjct: 13 AAERRASDVHLSCGRAPLFRVDGRLEDGGRAV-----VGREWLLASIRRMLSAAEWDDWE 67 Query: 66 LDFAVSLAEN-------QRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L+ +VS A +R R S F + A+RL+P+ P EQ G P VL L Sbjct: 68 LNKSVSAAHEFGAPSAPRRFRLSCFRSMGQPAAAIRLIPARIPAPEQCGLPAVLKGLCAK 127 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 +GL+L TG +GSGKST LA++V +LN+ HI+TLEDP+E+++ +R L+ QR+IG Sbjct: 128 GHGLLLFTGPSGSGKSTALASLVDWLNETCRIHIVTLEDPIEFVHEGKRALLHQRQIGRD 187 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 C +FA+GLR ALR+DPDVI +GE+RD ETI A+TAAETGHLVLATLH A QAVER++ Sbjct: 188 CPSFAAGLRDALRQDPDVIGIGEMRDGETISAAITAAETGHLVLATLHAPDAPQAVERII 247 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 D+FPA ++ VR Q A SL V + +L + GR E+L+ TPAV + IRE +T QL Sbjct: 248 DAFPAAQQAQVRAQTALSLAGVCAMRLVPQRAGGRCLATEMLVATPAVRSAIRESRTAQL 307 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++QT ++ GM T +QS V + R+ Sbjct: 308 KTILQTSRRDGMYTMEQSLLKLVEQKRI 335 >UniRef50_B8DPS9 Twitching motility protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPS9_DESVM Length = 433 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 134/321 (41%), Positives = 195/321 (60%), Gaps = 5/321 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRA 58 I++ +V SD+HL +R G + DV++L R L+ + Sbjct: 4 TFHRIISQAVAMGWSDVHLTGGHAVVYRKDGDIGMLRDTVLAPADVDDLARSLLNPHRAD 63 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 IL +DFA ++A R+R + F G+SLA+RLL P L L L E + Sbjct: 64 ILRRRWSVDFAHTVA-GVRVRMNIFNTTRGLSLAVRLLAGRIPTLAHLNLHPSLEEFTRL 122 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLILV GATGSGK+TT+AAM+ +N++ AHI+TLEDP+EY +AS++ ++QRE+G H Sbjct: 123 RAGLILVCGATGSGKTTTMAAMLDEINRNRPAHIITLEDPIEYRFASKKAFVEQRELGAH 182 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F GL LREDPDVIL+GELR++ETIRLAL+AAE+GHLV+A+LH+ +A+ RL Sbjct: 183 FPSFERGLLDVLREDPDVILVGELREAETIRLALSAAESGHLVIASLHSATPEEALYRLC 242 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKTHQ 297 ++FP + ++ VR+QL+ +L AV+ Q+L + RV + +LI T V L+REGK Q Sbjct: 243 NAFPLEAQELVRHQLSSTLHAVVVQQLRMHPVARFRVPVLSMLIGTHPVRMLVREGKFAQ 302 Query: 298 LPHVIQTGQQVGMITFQQSYQ 318 L +++ G+ GM T Y Sbjct: 303 LHSIMEMGRGDGMFTMGAYYD 323 >UniRef50_A5GMV2 Twitching motility protein n=3 Tax=Synechococcus RepID=A5GMV2_SYNPW Length = 430 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 134/318 (42%), Positives = 188/318 (59%), Gaps = 4/318 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRA 58 ++E+IV ++ SD+HL R+R RG M E D + LRE L Sbjct: 80 SLEDIVQIAHAKGHSDVHLGVGEIPRFRARGEMLQTEWPVTDPGTFQGWLREILSPQHID 139 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + + + D + + R+R + G ++ LRL+P LE L P VL EL Sbjct: 140 LFQQTKEFDGSHAFP-FVRVRINLLDSLLGPAMVLRLIPQTILTLEDLNLPDVLRELASR 198 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAM+ ++N+H HILT+EDPVE+++ SQR LI+ RE+GLH Sbjct: 199 PKGLVLVTGPTGSGKSTTLAAMIDWINRHQTRHILTIEDPVEFVHQSQRSLIRHREVGLH 258 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + F + LRAALREDPDVIL+GE+RD ET+ AL A++TGHLV TLHT A + VER++ Sbjct: 259 TLQFHNALRAALREDPDVILVGEIRDRETLSTALEASQTGHLVFGTLHTNSAVKTVERVL 318 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 FP +++D VR L+ SL V++Q L R A ++LINT A + I+ G + Sbjct: 319 GLFPPEDQDSVRRSLSESLLGVIAQGLIRTNDGKRAAYHDILINTEACKDYIQRGALDDV 378 Query: 299 PHVIQTGQQVGMITFQQS 316 +++ GM+T QS Sbjct: 379 EEIMERSGFDGMVTSNQS 396 >UniRef50_A6DTL1 Twitching motility protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTL1_9BACT Length = 361 Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 124/330 (37%), Positives = 194/330 (58%), Gaps = 7/330 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM-EAAPFDTPDVEELLREWLDDDQRAIL- 60 + I+ V+ SD H+ P R+ G + E + PD + L ++ + +L Sbjct: 6 LNSILVTGVQEGASDWHIREGSPVALRVHGGLYEISDGFVPDYDFLSSAIVEIAGQKVLD 65 Query: 61 --LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 LE G DFA R R + QR +S+ R + S P LE LG P ++ ++ + Sbjct: 66 LYLETGDADFAFDEDNAGRFRANIHRQRGLLSMTFRHVKSDVPPLEALGLPEIILKIAEY 125 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 E G+ILVTG TGSGKSTT+A M+ ++N + + HI+T+EDP+EY + + + +QRE+G+ Sbjct: 126 ERGIILVTGTTGSGKSTTMACMLEHMNTNMNRHIITVEDPIEYNFKDKNSIFEQREVGID 185 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++F + L+ ALR+DPDVI++GE+RD +I AL AA+TGH+V++TLHT A Q++ RL+ Sbjct: 186 TVSFGAALKYALRQDPDVIVVGEMRDVTSIESALHAADTGHMVISTLHTANAGQSITRLL 245 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGR--VALFELLINTPAVGNLIREGKTH 296 D+FPA ++ +R LA ++ A++ Q+L V + GR V E++INT + LI + K Sbjct: 246 DTFPATAREALRKSLAENVAAIVCQRL-VPRASGRGMVPCNEVMINTAFIKKLILDDKVD 304 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ I G + GM TF Q V G + Sbjct: 305 QISGAIAKGSEYGMFTFDQRLLQLVNAGDI 334 >UniRef50_A5TVA4 Possible pilus assembly ATP-binding protein n=8 Tax=Fusobacterium RepID=A5TVA4_FUSNP Length = 316 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 126/324 (38%), Positives = 204/324 (62%), Gaps = 19/324 (5%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 M++E+I + ++N+SD+HL +R G E +D + + D+ L Sbjct: 1 MDIEKIFDYARENNISDIHLLEGEKIYFRKDG--EIIEYDKNII-------ISKDE---L 48 Query: 61 LE--NGQL--DFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE-L 115 LE NG++ DFA + ++NQR R ++F R ++L +R++ +L+ ++ E + Sbjct: 49 LEICNGKIEEDFAYTDSKNQRYRVNSFLTRGKLALVIRIINKEPIKLKGKFINKLIDEKI 108 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 L ++GL+LVTG TGSGKSTTLA ++ N++ + ILT+EDP+EY++ +++ LI QRE+ Sbjct: 109 LSLKDGLVLVTGITGSGKSTTLANIIEKFNENKNLKILTIEDPIEYIFENKKSLIIQREL 168 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +F L+++LR+DPDVI+LGE+RD E++ AL AETGHLV +TLHT ++V Sbjct: 169 GKDVESFEKALKSSLRQDPDVIILGEIRDEESLYSALKLAETGHLVFSTLHTINTVESVN 228 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 RL+ +++KD +R QLA LR +LSQ+L K+ V +FE+L NT AV NLI K Sbjct: 229 RLISMVRSEKKDFIREQLASVLRFILSQELHRGKK--NVPIFEILNNTKAVANLILNNKL 286 Query: 296 HQLPHVIQTGQQVGMITFQQSYQH 319 +Q+P +I++G + MIT ++ ++ Sbjct: 287 NQIPTLIESGIENFMITKEKYLKN 310 >UniRef50_B2SPL0 Tfp pilus assembly protein n=67 Tax=Proteobacteria RepID=B2SPL0_XANOP Length = 377 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 123/331 (37%), Positives = 193/331 (58%), Gaps = 7/331 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD-----VEELLREWLDDD 55 M++ + L + N SD+ L + P +I G++ P V+++ +D+ Sbjct: 1 MDIGYFLKLMTEKNASDMFLTTGAPVHIKIEGKL--YPLGNTGLPPGMVKKIAYSLMDEG 58 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 Q +L+ A++L + R R +AF QR + + +R + S P +E+L P VL ++ Sbjct: 59 QVPQFERELELNIAIALPDAGRFRVNAFKQRGEVGMVIRAIRSRIPSIEELHLPQVLKDI 118 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + + GL+LV G+TGSGKST+LAAM+ + N HILT+EDP+EYL+ + ++ QRE+ Sbjct: 119 IMAPRGLVLVVGSTGSGKSTSLAAMIDHRNSTTTGHILTIEDPIEYLHKHKMSIVNQREV 178 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 GL F S L+ A+RE PDVIL+GE+ D+ET+ A+ AETGHL LATLH+ A Q +E Sbjct: 179 GLDTHAFQSALKNAMREAPDVILIGEILDAETMEAAIAFAETGHLCLATLHSNNADQTIE 238 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R+++ FP + V LA +LRAV+SQ+L R E+L+NTP + +L+R G+ Sbjct: 239 RILNFFPESAHNNVLMNLALNLRAVISQRLVKGLDGRRRPATEVLLNTPMIRDLLRRGQV 298 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 H++ ++ + GM TF Q V G + Sbjct: 299 HEVKQAMEESLEEGMQTFDQCLFRMVKSGEI 329 >UniRef50_A3ZSU4 Twitching motility protein PilT n=2 Tax=Planctomycetaceae RepID=A3ZSU4_9PLAN Length = 381 Score = 226 bits (577), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 124/329 (37%), Positives = 186/329 (56%), Gaps = 8/329 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 + +++I VK SDLH+ P RI G + P + ++ LL LD+ + Sbjct: 18 LEVDKIFRACVKLEGSDLHMKVGRPPIVRISGTLRELNREPVEAEEMVRLLLPLLDERNK 77 Query: 58 AILLENGQLDFAVSLAEN---QRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 IL ENG DFA + + R R + Q + L R + + PQ + L P ++ Sbjct: 78 RILEENGGADFAHQIQVDGVRWRFRVNMLTQLGNLGLVARRINNWIPQFDGLNLPPIMES 137 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L K + G++L+ G TGSGKSTT+A+M+ ++N + HILTLEDP+E++Y+ +CLI QRE Sbjct: 138 LCKFDQGMVLLAGVTGSGKSTTIASMLNWINANYSKHILTLEDPIEFVYSEDKCLINQRE 197 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 IG F + A+REDPD+IL+GE+RD ET A+ AAETGHLV T+H A + Sbjct: 198 IGQDVKNFEIAMGHAVREDPDIILIGEMRDQETFLTAIHAAETGHLVFGTIHASSAPSTI 257 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL--EVDKQEGRVALFELLINTPAVGNLIRE 292 R++D FP + +R+ +A ++R +++QKL + GRV E++ TP V LI E Sbjct: 258 GRILDLFPEEMHGSIRSAMAFNMRGIVAQKLLKSIKPGVGRVPTVEIMTMTPMVQKLILE 317 Query: 293 GKTHQLPHVIQTGQQVGMITFQQSYQHRV 321 GK +LP I+ G+ GM F S + + Sbjct: 318 GKDSKLPDAIRIGKDDGMQDFTMSLKKLI 346 >UniRef50_B6G0J4 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0J4_9CLOT Length = 402 Score = 226 bits (576), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 103/239 (43%), Positives = 166/239 (69%), Gaps = 1/239 (0%) Query: 77 RLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTT 136 R+R + + + G +++RL+P + ++L P ++ ++G+IL+TGATGSGKSTT Sbjct: 142 RIRVNIYRRNGGDCISIRLIPGYVKTAKELNIPDIVCSSGDLKSGIILITGATGSGKSTT 201 Query: 137 LAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDV 196 LAA++ +N+ + HI+TLE+P+EYL+ S + +I QRE G + F GL+++LR+DPDV Sbjct: 202 LAAIIDRINKTSKKHIITLEEPIEYLHKSDKSIISQRECGKDTVDFLDGLKSSLRQDPDV 261 Query: 197 ILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGS 256 I++GE+RD +T+ AL+A+ETGHLVL+T+HT A++A++R+V+ F A+ +R LA Sbjct: 262 IMIGEIRDKKTVETALSASETGHLVLSTVHTSKASEAIDRIVNLFEAERHKEIRGLLANQ 321 Query: 257 LRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQ 315 LR V SQ+L V GR A+FE++ NT ++ +IREGK + +I+TG++ GM F+ Sbjct: 322 LRYVFSQRL-VKANNGRRAIFEIMKNTNSIAAMIREGKDESIDDMIKTGKKYGMQMFED 379 >UniRef50_D1N9I8 Twitching motility protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9I8_9BACT Length = 551 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 129/316 (40%), Positives = 184/316 (58%), Gaps = 8/316 (2%) Query: 16 SDLHLCS-AWPARWRIRG--RMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLHL + + P R+ G R+ D L + ++R E ++FA+ + Sbjct: 201 SDLHLSAGSQPFVRRMLGIERISDYVLTAEDARRLNLALVSAERRGQFEEEMDINFALEV 260 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLG----APTVLPELLKSENGLILVTGA 128 ++ R R + GI + RL+P H LE+LG T + LL NGL+LVTG Sbjct: 261 GQD-RFRVCLMMHKDGIEGSYRLVPDHICTLEELGFLESDVTHIKRLLDYHNGLVLVTGP 319 Query: 129 TGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRA 188 GSGK+TTLAAMV +N HI+T+EDP+E L S+ C + QREIG H +++ + L+ Sbjct: 320 IGSGKTTTLAAMVDIINDKRTDHIITVEDPIEILQWSKNCQVTQREIGRHTVSYHAALKG 379 Query: 189 ALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDP 248 ALREDPDVI++GE+ D ETI A+TA+ETGHLV+ TLHT AA + RL+D FP ++ Sbjct: 380 ALREDPDVIVIGEMHDLETIENAITASETGHLVIGTLHTSDAANTLNRLLDVFPPSQQPQ 439 Query: 249 VRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +R AGSLR ++ Q+L G +E+++NT AVG++I EGKT +L + TG + Sbjct: 440 IRAMTAGSLRGIICQRLVPAAAGGLTVAYEIMVNTMAVGSIINEGKTFRLKSTMATGSRQ 499 Query: 309 GMITFQQSYQHRVGEG 324 GM T Q + G Sbjct: 500 GMCTLDQCLLEKYKRG 515 >UniRef50_C1A6T5 Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6T5_GEMAT Length = 444 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 130/320 (40%), Positives = 190/320 (59%), Gaps = 5/320 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEEL----LREWLDDDQ 56 M +E I+ +V SD+H+ + R RI GR+ E+ L ++D Sbjct: 1 MAIERIIKAAVDRGASDVHIKAGDVVRARIDGRLVVLTKQALTAEQTRAIALHLMVNDTD 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 RA + D + + R R + QR S+ +R++P P + L P+VL + Sbjct: 61 RANIDTLKDHDCSWATPGVGRFRVNIMRQRSAHSIVMRVIPEQVPTVSSLHLPSVLTRIA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +E G++LVTG TGSGKS+++AA+V +N + HILTLE+P+E+++A R + QRE+G Sbjct: 121 HTERGMVLVTGVTGSGKSSSMAALVHEINASYEKHILTLENPIEFIHADLRSSVTQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + TF GLRAALR+DPDVIL+GE+RD+ETI A+ AAETGHL+++TLHT A + R Sbjct: 181 IDTDTFRMGLRAALRQDPDVILIGEMRDAETIDTAMKAAETGHLLISTLHTPDAQSTILR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKT 295 +V FP +E+ VR +LA SL AV+SQ+L K +GRV E++I T + +LI EG Sbjct: 241 IVAMFPPEEQLVVRTRLAESLHAVVSQRLLPRKNGQGRVVAAEVMIVTSTIRDLIAEGNI 300 Query: 296 HQLPHVIQTGQQVGMITFQQ 315 ++ I G Q GM TF Q Sbjct: 301 AEIRDYIADGAQYGMQTFDQ 320 >UniRef50_C6RE58 Twitching mobility protein n=2 Tax=Campylobacter RepID=C6RE58_9PROT Length = 750 Score = 223 bits (569), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 119/305 (39%), Positives = 180/305 (59%), Gaps = 6/305 (1%) Query: 16 SDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLH+ S+ R R G M D + L +E L + L++ +DF L Sbjct: 381 SDLHVKSSKVVRGRFNGEIFTMGDKILDYDNSILLAKEILGANYYN-LMKRKSVDFTYKL 439 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN-GLILVTGATGS 131 ++ R R + F Q G+S R +P+ P + +L P V+ +L N G++LVTG TGS Sbjct: 440 NDDYRFRSNVFLQMDGVSFVFRTIPTKIPTMSELLLPPVIEKLCNKVNRGIVLVTGPTGS 499 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTLA+M+ +LN + HI+T+EDP+E++Y + +I QR IG +FA LRA+LR Sbjct: 500 GKTTTLASMINHLNHTKNYHIVTIEDPIEFIYNDDKSVINQRGIGQDVDSFADALRASLR 559 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 EDPDVI +GE+RD ET+R A+ AAETGHLVLATLHT A + + R+++ FP +E++ +R Sbjct: 560 EDPDVIFVGEMRDLETVRTAINAAETGHLVLATLHTLDAKETIGRVINMFPKEEQNRIRM 619 Query: 252 QLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVI-QTGQQVGM 310 A A++SQ+L V R E+++ + ++I E + ++ I Q+ GM Sbjct: 620 TFASVAEAIISQRLVVTTTGKRRVACEIMVKNIRIRDMILEDRDSEIYDAIEQSKNTYGM 679 Query: 311 ITFQQ 315 TF+Q Sbjct: 680 QTFEQ 684 >UniRef50_Q2SCC2 Tfp pilus assembly protein, ATPase PilU n=58 Tax=Bacteria RepID=Q2SCC2_HAHCH Length = 404 Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 112/316 (35%), Positives = 190/316 (60%), Gaps = 3/316 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQR 57 M + + + K++ SDL+L + P + G++ + P + E+ +D++QR Sbjct: 1 MEFNQYLTVLAKNDGSDLYLSTGAPPCAKFHGKLKPIDKTPLPPGRIMEIANAIMDEEQR 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ A S+ + R R + F QR+ +S+ R + + P + LG P +L E+L Sbjct: 61 EQFAHELEMNLAYSIPQVGRFRVNIFKQRNEVSIVARNIVTDIPNADSLGLPPILKEVLM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 S+ GLIL GATGSGKST+LAA++ + N ++ HI+T+EDPVE+++ ++ +I QRE+G+ Sbjct: 121 SKRGLILFVGATGSGKSTSLAALIDHRNSNSGGHIITIEDPVEFIHKHKKSIINQREVGV 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ + L+ LR+ PDVIL+GE+RD ET+ AL AETGHL ++TLH + QA++R+ Sbjct: 181 DTRSYHNALKNTLRQAPDVILIGEIRDRETMEHALAFAETGHLCISTLHANNSNQALDRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + ++ + L+ +LRA +SQ+L R A E+L+ TP V LI G Sbjct: 241 INFFPEERRNQLLMDLSLNLRAFVSQRLVPTIDGKRTAAIEILLGTPTVSELILRGDIDG 300 Query: 298 LPHVIQTGQQVGMITF 313 + ++Q + +GM TF Sbjct: 301 IKEIMQKSENIGMQTF 316 >UniRef50_A6DU37 Pili retraction protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DU37_9BACT Length = 478 Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 128/322 (39%), Positives = 189/322 (58%), Gaps = 7/322 (2%) Query: 12 KHNVSDLHLCS-AWPA--RWRIRGRMEAAPFDTPDVEELLR-EWLDDDQRAILLENGQLD 67 ++ SD HL + A+P + I + TPD+ + L L + E G LD Sbjct: 137 RNGSSDAHLSADAYPFVRHFGINYLLREQAIMTPDMAKKLNLSLLGEKDLKAFEEVGDLD 196 Query: 68 FAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLG--APTVLPELLKSENGLILV 125 + S + +R R + G+ + R++ L +LG P VL +L GLIL+ Sbjct: 197 YCYSFSRTERYRSNLMVHNDGVEGSYRIVSEGIKTLAELGFQEPAVLEKLTTYHQGLILI 256 Query: 126 TGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASG 185 TG SGK+TTLAAMV +N++ HI+T+EDPVE L S+ C + QRE+ +FA+ Sbjct: 257 TGPASSGKTTTLAAMVDLINKNRKDHIITVEDPVEILIPSKDCNVSQRELHTGTKSFANA 316 Query: 186 LRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQE 245 L+AALREDPD+I+LGE+RD ETI + L+AAETGHLV+ TLHT A+ ++R++D FP + Sbjct: 317 LKAALREDPDIIILGEMRDLETIEMGLSAAETGHLVIGTLHTNSASSTLDRILDVFPPDQ 376 Query: 246 KDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 + +R +A SLR V+ Q L +K E G + E+LI AV NLI++ KT QL VI+ Sbjct: 377 QSQIRAMVAESLRGVICQYLVPNKDETGLLMAPEILIGNIAVANLIKDNKTSQLTSVIEV 436 Query: 305 GQQVGMITFQQSYQHRVGEGRL 326 G++ GM+ + S+ EG++ Sbjct: 437 GKKQGMVLKEDSFLRLYHEGKI 458 >UniRef50_A1AM74 Twitching motility protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AM74_PELPD Length = 361 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 124/317 (39%), Positives = 191/317 (60%), Gaps = 4/317 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRAI 59 +E ++ V+ SD+HL R+R+ G ++A F + VE + +++ QR Sbjct: 8 LEVLLRTCVELGASDMHLSGGERVRFRVNGLLQAHGNELFSSDAVEAMATAIMNEHQRKE 67 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 D S ++ +R R + F + ++ +R L LE+LG P+ L EL Sbjct: 68 FFTRLTADIGYSSSDGERYRVNCFREMCKPAMTVRHLDQRLRSLEELGLPSRLRELAYLH 127 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +GL+LVTGATGSGKS+TLA ++ +N+ D HILT+EDPVE+++ SQR L+ RE+ Sbjct: 128 SGLVLVTGATGSGKSSTLAMLLNEINRTRDCHILTVEDPVEFIHTSQRSLVHHREVHTDV 187 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++A +RAA+REDPDVI++GE+RD ET++ +L AAETGHLV +TLHT A A+ER + Sbjct: 188 PSYAEAVRAAMREDPDVIMVGEMRDLETMQASLAAAETGHLVFSTLHTGEAVGAIERFIG 247 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKTHQL 298 F +E+ R+++A LRA+++Q+L + RV ELL+ A NLI+ +T QL Sbjct: 248 YFSGEEQAVARHRIAMVLRAIVAQRLVIGLDGRKRVPAVELLMVNTAAANLIQTSRTRQL 307 Query: 299 PHVIQTGQQVGMITFQQ 315 +++TG + GM T Q Sbjct: 308 YSMMETGAKDGMWTLDQ 324 >UniRef50_Q028H4 Twitching motility protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028H4_SOLUE Length = 383 Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 133/330 (40%), Positives = 194/330 (58%), Gaps = 6/330 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRA 58 ++++++ + SD+ L + P R+ G + A D DV L+ L+ Q Sbjct: 35 SLDQLLHAAAGRGASDVLLIAGAPPMLRVTGNLTAGGGTVLDAEDVRSLVLPLLEHAQLE 94 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L + +D + R R + QR ++ ++RLLPS P +E L P L +L Sbjct: 95 ELQKRKSVDLSFVRENIGRFRVNIHHQRGTLAASIRLLPSRIPSIESLHLPGSLAKLADR 154 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TG GKS+TLAA++ +N AH++T+EDPVEY +A++ +I+Q E+G Sbjct: 155 RQGLVLVTGPTGCGKSSTLAALIDIVNTRRAAHVVTIEDPVEYQHANRSAIIEQIEVGRD 214 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 FA LR+ +R+ PDVIL+GE+RD+ETI ALTAAETGHLV +TLHT A QA R++ Sbjct: 215 TPDFAVTLRSIMRQTPDVILVGEMRDAETIATALTAAETGHLVFSTLHTNDAIQATSRIL 274 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG--RVALFELLINTPAVGNLIREGKTH 296 DSFPA + +R QL+ +L AV++Q+L V +G R E++I T AV LIR+G H Sbjct: 275 DSFPAGNQPQIRQQLSLALAAVIAQQL-VPGLDGVSRWPATEIMIATDAVRALIRKGDDH 333 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 QL I G+ GM+T +QS V R+ Sbjct: 334 QLRSQISVGRAEGMMTMEQSLTELVKSNRI 363 >UniRef50_B3E8J7 Twitching motility protein n=8 Tax=Desulfuromonadales RepID=B3E8J7_GEOLS Length = 357 Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 123/311 (39%), Positives = 191/311 (61%), Gaps = 5/311 (1%) Query: 1 MNM-EEIVALSVKHNVSDLHLCSAWPARWRIRGRM--EAAPFDTP-DVEELLREWLDDDQ 56 MN+ +I+ ++ + VSDLH P +R G++ P TP D E + + L Sbjct: 3 MNLLNQILGIAFEKRVSDLHFEVDNPPFFRAHGQLIRSKLPSLTPQDTEFIAKTVLAQSN 62 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R + + +LD A +L R R S F QR + + +R++P + +L P VL E+ Sbjct: 63 RQLPEDLRELDAAYALPNGGRFRVSIFRQRCSVGIVMRVIPPYIAAFNELNLPPVLGEIC 122 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 ++ NGLILVTG TG+GKSTTLA+M+ ++NQ+ +I+T+EDP+E+L+AS + I QRE+G Sbjct: 123 QAPNGLILVTGPTGNGKSTTLASMLQFINQNDSFNIITIEDPIEFLFASDKSCIIQREVG 182 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + +F++ L+A+LR DPDVI++GE+RD ETI + AAETGHLV +TLHT+ A+ + R Sbjct: 183 IDTGSFSAALKASLRMDPDVIMVGEMRDLETIDSCIKAAETGHLVFSTLHTQSASSTINR 242 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKT 295 LV FP ++ +R +LA L A +S +L DK RV + E++ T + IREG+ Sbjct: 243 LVGHFPPDAQEVIRQRLADILVATISLRLINDKTGERVLPVVEIMRTTTTIQACIREGRF 302 Query: 296 HQLPHVIQTGQ 306 ++ I+ G+ Sbjct: 303 DEIEKHIENGR 313 >UniRef50_A6GEM2 Twitching motility protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEM2_9DELT Length = 695 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 125/320 (39%), Positives = 192/320 (60%), Gaps = 8/320 (2%) Query: 12 KHNVSDLHLCSAWPARWRIRGRME--AAPFDTPDVEELLREWL---DDDQRAILLENGQL 66 + SD+HL PAR+R G + DVE +L + D L + G Sbjct: 291 ESGASDIHLVGDQPARFRRLGSLSPVGPAIAKRDVEPMLMPLMRQAGDTLTKQLEDIGYA 350 Query: 67 DFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVT 126 DF++ A R+R + R G+ R++ P L +LG P L ++ + GL +V+ Sbjct: 351 DFSIQFASTGRMRVNFAKGRTGLKGCFRVIIDTPPTLTELGLPKELGKVAEYHQGLAIVS 410 Query: 127 GATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGL 186 G +G GK+TT+AA+V +N++ HI+T+EDP+E ++ +R +I QR++GLH +F L Sbjct: 411 GPSGQGKTTTMAALVDLVNRNKPDHIITVEDPIEVVHPIRRSVISQRQVGLHTASFHRAL 470 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 +AALREDPDVI++GELRD ET+ +AL AAETGHLV+A++ T A+ ++RL+D FP ++ Sbjct: 471 KAALREDPDVIVIGELRDRETVEMALQAAETGHLVIASMSTPSGAKTIDRLIDMFPPDDQ 530 Query: 247 DPVRNQLAGSLRAVLSQKLEVDKQEGR--VALFELLINTPAVGNLIREGKTHQLPHVIQT 304 VR+ LAG+L+ V+SQ+L V +G VA EL+ + +LIRE K +QLP ++Q Sbjct: 531 SQVRSTLAGALKIVVSQRL-VPAADGTRMVAAAELITGNIPLWSLIRENKLYQLPSLLQR 589 Query: 305 GQQVGMITFQQSYQHRVGEG 324 G+ GMI + S + +G Sbjct: 590 GRNYGMIRVEDSLNELLAQG 609 >UniRef50_A1VIC5 Twitching motility protein n=2 Tax=Proteobacteria RepID=A1VIC5_POLNA Length = 384 Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 121/313 (38%), Positives = 187/313 (59%), Gaps = 3/313 (0%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQRAILLEN 63 +AL V H SDL L + A +I+GR+ P ++ L + D Q + Sbjct: 25 LALMVAHGASDLFLSAEVAASLKIQGRIRRLPEPPLTGTHIKRLAYSVMRDSQVREFEAD 84 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLI 123 + D A+++ R R + F QR +++ +R + S P LE L P VL L + GL+ Sbjct: 85 LECDLAIAMDALGRFRVNVFRQRGEVAVVVRHINSTIPTLESLKLPPVLKTLAMLKRGLV 144 Query: 124 LVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFA 183 LV GA GSGKSTTLAAM+ Y N A HILT+EDP+E+ ++ ++C++ QRE+GL +F Sbjct: 145 LVVGAAGSGKSTTLAAMLDYRNNMASDHILTVEDPMEFEHSHKKCIVDQREVGLDTRSFD 204 Query: 184 SGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPA 243 LR A+RE PDVI++GE+RD ET++ A+ AETGHL ++TLH A QA++R+++ FP Sbjct: 205 EALRRAMREAPDVIMIGEIRDRETMQHAMAYAETGHLCVSTLHANNANQAIQRVLNFFPE 264 Query: 244 QEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 + V L+ +L+ V+ Q+L RV E+++ +P V +LI++G+T ++ V+ Sbjct: 265 TAQRQVLMDLSLNLKGVVGQRLLAGAAGKRVPAVEVMLLSPYVADLIQKGQTDEIKAVMA 324 Query: 304 TGQQVGMITFQQS 316 ++GM TF QS Sbjct: 325 KSVELGMATFDQS 337 >UniRef50_B0MN56 Putative uncharacterized protein n=12 Tax=Bacteria RepID=B0MN56_9FIRM Length = 355 Score = 220 bits (561), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 126/333 (37%), Positives = 195/333 (58%), Gaps = 8/333 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQR 57 M + EI+ +V+ SD+ + S ++ G + + + E L++E R Sbjct: 1 MELMEILKGAVEKKASDIFIISGLAVTYKENGIITKQNDNMILPAEAERLIKEIYRLAGR 60 Query: 58 AI--LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT-VLPE 114 I E G DF+VS+ R R SA+ QR ++ +R++ P ++L P V+ + Sbjct: 61 DISRYEETGDDDFSVSVKGLSRFRISAYKQRGSMAAVIRVVEFDIPDYKELNIPQEVITD 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + GL+LVTG G GKSTTLA ++ +N+ ++HI+TLEDP+EYL+ +++ +I QRE Sbjct: 121 TVARTKGLVLVTGPAGGGKSTTLACIIDEINKQRNSHIITLEDPIEYLHKNKKSIISQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 I ++ LRA LR+ PDVILLGE+RD ETI ALTAAETGHLV++TLH+ GA + Sbjct: 181 INSDSKSYIVALRACLRQSPDVILLGEMRDYETISTALTAAETGHLVISTLHSVGAQNTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREG 293 +R++D FP ++ VR QL+ L +V+SQ+L + ++G + FE++ A+ N+IRE Sbjct: 241 DRIIDIFPPSQQQQVRIQLSQLLCSVISQQL-IPCEDGILRPAFEIMKCNNAIRNMIRES 299 Query: 294 KTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 KTHQ+ VI + GM T H G++ Sbjct: 300 KTHQIDTVITASGESGMFTMDSYLMHMYRNGQI 332 >UniRef50_C7QZF3 Twitching motility protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZF3_JONDD Length = 432 Score = 219 bits (559), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 128/305 (41%), Positives = 178/305 (58%), Gaps = 5/305 (1%) Query: 16 SDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSL 72 SDLH+ + R R+ GR+ + D +L E L + L N + DFA L Sbjct: 91 SDLHIKAGSVPRVRVDGRLRRLQVPDLTDGDTARMLEEVLPEQLHQEFLTNHETDFAYYL 150 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSG 132 R R +A+ R + + R + H L +LG P V+ EL GL+LVTG TGSG Sbjct: 151 QGVGRFRVNAYRARGMVGIVFRRVAEHAMSLHELGLPEVVGELALEPRGLVLVTGPTGSG 210 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 KSTTLA+MV +N + +I+T+EDP+E L++ ++ ++ QRE+ F S LRAA+R+ Sbjct: 211 KSTTLASMVDLINTLREVNIVTIEDPIEVLHSDKKAIVSQREVRFDTADFNSALRAAMRQ 270 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 DPDVIL+GE+RD+ET+R AL A ETGHLVL+TLHT A + V R+VD FP+ E+ VR Sbjct: 271 DPDVILVGEMRDAETVRAALQAGETGHLVLSTLHTIDAEETVNRIVDFFPSHEQMQVRMA 330 Query: 253 LAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGN-LIREGKTHQLPHVIQTGQQVGM 310 LA SLR ++SQ+L EGR + E++INT +I T L +I G+ M Sbjct: 331 LAQSLRGIVSQRLVRRADNEGRHVVAEVMINTGRTAEAIIAPSTTASLTDLIADGEYYNM 390 Query: 311 ITFQQ 315 TF Q Sbjct: 391 QTFDQ 395 >UniRef50_C9LRT0 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LRT0_9FIRM Length = 349 Score = 219 bits (558), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 193/324 (59%), Gaps = 5/324 (1%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRAILLE 62 I A SD+HL + R+ G M D+ ++++ L L + ++ L + Sbjct: 9 IFAEGFARGASDVHLAAGQRPFLRLDGEMTPLSEDSLTQKELQDFLAHILTEAEQERLRQ 68 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 LD +++L E + R + ++A+RLLP P L LG P L LL++++GL Sbjct: 69 EKSLDLSLAL-EERHCRAHVYGMSGSWAIAVRLLPREIPALSSLGVPPALFSLLRAQDGL 127 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 ILV G TG+GKSTTLAA + +N+ AHI+TLEDPVEY + +RC I QR +G +F Sbjct: 128 ILVGGRTGAGKSTTLAAFIEEMNKSRAAHIITLEDPVEYAFVPKRCFISQRTLGRDFPSF 187 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 GLR ALREDPDVIL+GE+R+ ET+R+AL AAE+G LVLATLHTR AA+AV R+ F Sbjct: 188 PVGLRDALREDPDVILIGEMRERETVRIALQAAESGCLVLATLHTRDAAEAVLRIEGMFA 247 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +E+ +R+Q A LRA+ SQ+L GRV E L+ PAV NLIR G+ QL I Sbjct: 248 GEEQQ-MRHQFALVLRAIFSQRLLPQSGGGRVLAAEALVAAPAVRNLIRTGRVAQLRGAI 306 Query: 303 QTGQQVGMITFQQSYQHRVGEGRL 326 +G GM T QS + + G++ Sbjct: 307 LSGGAQGMQTMAQSVEGLLRAGKI 330 >UniRef50_B5YIZ9 Twitching motility protein PilT n=4 Tax=Bacteria RepID=B5YIZ9_THEYD Length = 387 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 121/291 (41%), Positives = 186/291 (63%), Gaps = 8/291 (2%) Query: 38 PFDTPDVEELLREWLDDDQRAI--LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRL 95 PF T + +L +++ +R I L+++G D + ++ + R R + F+QR S+ +R Sbjct: 54 PFHTERIALIL---MNNQKRLIENLIKDGYCDTSYAI-QKARFRVNIFSQRGSYSIVMRK 109 Query: 96 LPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTL 155 LP P +E+L P ++ E+ K GL+LVTGATGSGKS+TLAA++ +N+ +HI+TL Sbjct: 110 LPVKIPTVEELRLPPIIKEIAKERMGLVLVTGATGSGKSSTLAAILNIINETRASHIITL 169 Query: 156 EDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAA 215 EDPVE+++ ++ QRE+G+ FA GLRAALR+ P VIL+GE+RD ET+ +A+ AA Sbjct: 170 EDPVEFVHPHKKSTFNQRELGVDFHNFADGLRAALRQAPHVILVGEIRDRETLEIAIMAA 229 Query: 216 ETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVA 275 ETGHLVL+TLHT A Q + R+V FP ++ +R +++ +L+ V+ Q+L +GRVA Sbjct: 230 ETGHLVLSTLHTTDAGQTIGRIVGMFPPDDESYIRLRISDTLKWVVGQRLLPRIDKGRVA 289 Query: 276 LFELLINTPAVGNLIREGKTHQ--LPHVIQTGQQVGMITFQQSYQHRVGEG 324 + E++ NT V LI G+T + +I+T + GM TF QS EG Sbjct: 290 VTEIMRNTLRVRELIINGETAEKTFYDIIETSEAAGMHTFDQSILKCYKEG 340 >UniRef50_UPI0001744C3C Pilus retraction protein PilT n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744C3C Length = 361 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 122/313 (38%), Positives = 184/313 (58%), Gaps = 4/313 (1%) Query: 16 SDLHLCSAWPARWRIRGRMEAAPFDTPDVE---ELLREWLDDDQRAILLENGQLDFAVSL 72 SDLHL + P R+ G ++ + D E E++ L + QR+ L + +LDFA+ + Sbjct: 19 SDLHLSAESPPMMRLNGILQPLTDEVLDAETCREIILGGLKESQRSRLEQEWELDFAIEV 78 Query: 73 AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSG 132 R RG+ + + + R +P H P L LG + + E+GLIL+ G +GSG Sbjct: 79 ENLGRFRGTVYYVTSHLEGSFRHVPEHIPDLADLGHGPNVERMCDREHGLILIAGTSGSG 138 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 K+TTLA+M+ + + +I+++EDPVEY++ R +++QR++G +F LR+ALR Sbjct: 139 KTTTLASMIQKVARERGGNIVSIEDPVEYVFKHHRGVVRQRQVGADTQSFVHALRSALRS 198 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 D DVI++GE+RD E+IR+A+TAAETGHLV+ TLHT A+ V R++D+FP + +D V +Q Sbjct: 199 DADVIVIGEMRDLESIRIAITAAETGHLVIGTLHTTDASTTVARILDAFPEEIQDYVSSQ 258 Query: 253 LAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMI 311 LA SL V+ Q L Q GRV E++ N + IR + QLP +IQ G GM Sbjct: 259 LAHSLIGVVCQHLITRLDQPGRVLATEVMTNNHGISACIRSRRFAQLPGLIQIGGNDGMH 318 Query: 312 TFQQSYQHRVGEG 324 T S H + G Sbjct: 319 TIDDSLSHLLRHG 331 >UniRef50_A1TQ20 Twitching motility protein n=3 Tax=Comamonadaceae RepID=A1TQ20_ACIAC Length = 387 Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 123/329 (37%), Positives = 186/329 (56%), Gaps = 7/329 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM-----EAAPFDTPDVEELLREWLDDDQR 57 ME I+ L + SD++L + P +I G + PFD P + LL E + D+ Sbjct: 4 MERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAP--KNLLAEIVPPDRI 61 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L E G+L+ V L R R SA QR ++ +R + H P+L L P +L EL+ Sbjct: 62 EELEETGELNMGVPLTGVGRFRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELIL 121 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LV GATGSGKSTTLA+M+ N HILT+EDPVEY + +++ ++ QREIG Sbjct: 122 EKRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVEDPVEYQFKNKKSIVNQREIGS 181 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 + + L+ ALR+ PDVIL+GE+RD ET+ A+ A++GHL LATLH + A+ R+ Sbjct: 182 DTQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNRI 241 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 + +P + + + LA +L+A++SQ+L R+ E+L+NT VG +I +G Sbjct: 242 LSFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFSG 301 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++ G TF+ V EGR+ Sbjct: 302 VREAMEKSMAEGSQTFEHDLARLVVEGRI 330 >UniRef50_A8VZF7 Tfp pilus assembly protein pilus retraction ATPase PilT-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZF7_9BACI Length = 311 Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 111/243 (45%), Positives = 151/243 (62%), Gaps = 3/243 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAI 59 +EE++ + SDLH+ P R G +E D D E + R + + Sbjct: 5 IEELLRKAFYDGASDLHITVGVPPVMRTNGELEKVGTDMMKPADTEGMARAIIPEALWKN 64 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + G+LDF+ L R R +A+ QR +SLA+R++P+ P ++ L P +L + Sbjct: 65 FEKKGELDFSYGLRGVSRFRVNAYFQRSCVSLAIRVIPTVIPTIDDLNMPKILESIASKP 124 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLAAM+ Y+N + HI+TLEDP+EYL+ +I QREIG Sbjct: 125 QGLVLVTGPTGSGKSTTLAAMISYMNTRMNRHIITLEDPIEYLHKHGTSVIDQREIGFDT 184 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 FA+GLRAALR+DPDVIL+GE+RD ETI A+TAAETGHLVL TLHT A ++R++D Sbjct: 185 QNFANGLRAALRQDPDVILVGEMRDLETISTAITAAETGHLVLGTLHTTNAPSTIDRIID 244 Query: 240 SFP 242 FP Sbjct: 245 VFP 247 >UniRef50_A1K8L4 Twitching motility protein n=180 Tax=cellular organisms RepID=A1K8L4_AZOSB Length = 435 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 115/330 (34%), Positives = 194/330 (58%), Gaps = 8/330 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE-ELLREW----LDDDQR 57 M +++A SDL + +P + G M+ P + EL R ++ QR Sbjct: 13 MHKLLAAMSNAGGSDLFISHDFPPSMKSHGSMQ--PMTNQKLTGELTRSLAYSLMNAAQR 70 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + +FA+S+ R R + F Q+ + + +R + + P E+L P VL E++ Sbjct: 71 EEFEREMECNFAISVPGLSRFRVNVFVQQTYVGMVIRTIAAEIPNFEKLSLPEVLKEVIM 130 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 ++ GL+LV G TGSGKSTTLAAM+ Y N H+ HI+T+EDPVEY++ S++ LI RE+G+ Sbjct: 131 NKRGLVLVVGGTGSGKSTTLAAMIDYRNSHSAGHIITIEDPVEYVHKSKKSLITHREVGV 190 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ L+ LR+ PDVIL+GE+RD+ET+ A+ AETGHL L TLH A Q ++R+ Sbjct: 191 DTHSWHHALKNTLRQAPDVILIGEIRDAETMEHAIAFAETGHLCLGTLHANNANQTIDRI 250 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKL-EVDKQEGRVALFELLINTPAVGNLIREGKTH 296 ++ FP + ++ + L+ +LR+++SQ+L + + +GR A E+L+NT + I +G+ + Sbjct: 251 INFFPEERRNQLLMDLSSNLRSIISQRLVKTEDGKGRRAAIEILLNTSTIAERIFKGQYN 310 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +++ +++GM TF + EG + Sbjct: 311 DIKAIMEKSRELGMRTFDWALFELYNEGHI 340 >UniRef50_B7C7D1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D1_9FIRM Length = 351 Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 114/322 (35%), Positives = 192/322 (59%), Gaps = 7/322 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA------APFDTPDVEELLREWLDD 54 M++ EI+ ++K N SD+ + P ++ ++ A P DT ++ + L + Sbjct: 1 MDVVEILKKAIKENASDIFFVAGSPCMLKVGQQLVAITQEKMMPNDTKNIVQQLYGFAPY 60 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 +NG+ DF+ SL++ R R + + QR+ + LR++ P+ E P + Sbjct: 61 CSYENFEKNGEDDFSFSLSQVGRFRVNVYRQRNSEAAVLRVVKFELPKPEDFHIPESILS 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L G+ILV+G GSGKSTTLA ++ +N+ + HI+T+EDP+E+L++ ++ ++ QRE Sbjct: 121 LSNRRKGIILVSGPAGSGKSTTLACLIDRMNETRNCHIITIEDPIEFLHSHKKSIVSQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 + + + L++ALRE P++ILLGE+RD ET+ AL+AAETGHL+L+TLHT GA + Sbjct: 181 VYHDTKNYLTALKSALREAPEIILLGEMRDEETVSTALSAAETGHLILSTLHTVGAVNTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 +R+VD F + D VR+QL+ L AV+S++L + +FE++ PA+ + IRE K Sbjct: 241 DRIVDMFQGHQ-DQVRSQLSMILEAVISEQLIPTIDGELIPVFEIMQVNPAIRSQIRENK 299 Query: 295 THQLPHVIQTGQQVGMITFQQS 316 HQ+ + + + +Q GM+ S Sbjct: 300 IHQIENTMASNRQNGMVMMDDS 321 >UniRef50_UPI00016C3547 twitching motility protein PilT n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3547 Length = 359 Score = 216 bits (551), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 184/319 (57%), Gaps = 10/319 (3%) Query: 10 SVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDD--QRAILLENG 64 +V+ SDLH+ + P R+ G + AP D E LL +D QR +N Sbjct: 16 AVQAGASDLHVVAGHPPVIRLHGDLIELPEAPLTAADTEPLLLSSCPEDVAQRLQNSKNA 75 Query: 65 QLDFAVSLA-ENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLP-ELLKSENGL 122 F L ++ R R + F RL+P P L G P L L+ +GL Sbjct: 76 DYSFECELGGKSTRFRATLFLAGGDTGGCFRLIPDAIPDLTWAGFPADLAARLVALRDGL 135 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ-RCLIQQREIGLHCMT 181 ++VTGATGSGKSTTLA +V +N+ I+T+E+PVEY + + +I QRE+G ++ Sbjct: 136 VIVTGATGSGKSTTLAMLVNQINKAGGYRIITVEEPVEYRFPREPNSVITQREVGGDVLS 195 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 FA GL+ LR+DPDVIL+GE+RD ET ++AL+AAETGHLV +TLHTR A A+ RL D F Sbjct: 196 FADGLKYGLRQDPDVILVGEVRDRETAQMALSAAETGHLVFSTLHTRDAKGAITRLPDLF 255 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKL--EVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 P VR+QLA SLRA++SQ+L V K E R E+L NT V + IR+ K + Sbjct: 256 PPDAHSGVRSQLAMSLRAIVSQRLLPSVQKSEKRHLALEVLWNTHPVASAIRQNKVESID 315 Query: 300 HVIQTGQQVGMITFQQSYQ 318 + IQTG++ GM T +S + Sbjct: 316 NCIQTGREDGMWTCDESVR 334 >UniRef50_C0FXQ3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXQ3_9FIRM Length = 360 Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 118/307 (38%), Positives = 191/307 (62%), Gaps = 7/307 (2%) Query: 12 KHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAILLENGQLDF 68 K SD+H RI GR+ + + +EEL+ + LD Q+ ENG+++F Sbjct: 21 KKGASDIHYVPKEQLLLRIDGRLVDMTEEWNVSFSMEELIEKLLDKKQQKTFEENGEVEF 80 Query: 69 AVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGA 128 + + N+R+R + F Q ++++RL P + LG P ++ GLILVTGA Sbjct: 81 SCPVF-NKRVRVNLFRQSGTCAMSVRLFAEKIPTPQMLGLPESAVQMAGKRRGLILVTGA 139 Query: 129 TGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRA 188 +GSG++TT+A+M+ ++ + + ILTLE P EYL+ S + ++ QREIG+ ++ +GL+A Sbjct: 140 SGSGRTTTMASMIDHIASNYERSILTLEKPAEYLFRSGKSMVLQREIGIDSRSYEAGLKA 199 Query: 189 ALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDP 248 AL++D DVIL+ E+ D +T+ LALTAAE GHLV+A L TR A ++ER+V+ FP + Sbjct: 200 ALKQDMDVILISEMEDLDTVSLALTAAEMGHLVIAALPTRNAVASIERVVECFPDHRQHQ 259 Query: 249 VRNQLAGSLRAVLSQKL--EVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +R+QL+ L V+SQ+L +D GRVA FE+L+ + +LI+E K Q+P V+++ + Sbjct: 260 IRSQLSDVLAGVISQQLLPRLDGG-GRVAAFEVLLANQEIKSLIKEQKYFQIPSVMRSCR 318 Query: 307 QVGMITF 313 + GM++ Sbjct: 319 KEGMVSM 325 >UniRef50_Q1QT12 Twitching motility protein n=19 Tax=Gammaproteobacteria RepID=Q1QT12_CHRSD Length = 385 Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 119/328 (36%), Positives = 189/328 (57%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQRAI 59 + +++ + + SDL + + P +I G + V EL+ L R Sbjct: 7 LTQLLDIMLDKQASDLLVSTGAPPSLKIDGALVTLGDKAMSVGQVRELVSAALPQGVRER 66 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + +FA+S+ R R SAF QR +++ +R + P LE L P+ L EL+ + Sbjct: 67 FEAEREANFALSVPGKGRFRVSAFYQRSQMAMVVRRIAYDIPDLESLALPSALGELVNRQ 126 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+ + G TGSGKSTTLA+M+ + NQ H++++EDP+EY++ R +I QRE+G+ Sbjct: 127 RGLVFIVGGTGSGKSTTLASMIQHRNQTTGGHVISIEDPIEYIHPHGRAIINQREVGIDT 186 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F L+ ALR+ PDVIL+GE+R E + ALT AETGHL LATLH A QA+ER+ Sbjct: 187 ESFEVALKNALRQAPDVILIGEVRSREVMEHALTFAETGHLCLATLHANNANQALERIQH 246 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 FP++ + V L+ +L+A+++Q+ L + EGR A E+++ +P + +LIR+G H + Sbjct: 247 FFPSERHEQVWMDLSLNLQAIVAQRLLPREDGEGRCAAVEVMLRSPLISDLIRKGAIHDI 306 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 V+Q + GM TF Q+ +GR+ Sbjct: 307 KEVMQRSRDQGMQTFDQALYALYRQGRI 334 >UniRef50_D2DXQ5 Twitching motility protein n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXQ5_9BACT Length = 371 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 120/329 (36%), Positives = 191/329 (58%), Gaps = 14/329 (4%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLEN-- 63 I+ +V+ SD+HL P RI G E P + P + WL R+I+ ++ Sbjct: 14 ILRAAVQSEASDIHLKPGSPPVVRIDG--ELVPVEAPTPTD---AWLRVVLRSIIPQHLT 68 Query: 64 ------GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + DFA + ++ R R + F QR ++A+RL+ + L P + +L Sbjct: 69 TQFEQAHEADFAFTY-QDLRFRVNIFQQRGHPTVAMRLVKQLMRNFDDLNLPPQIADLAS 127 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + G++++ GATGSGKSTTLAAMV ++N HI+T+EDP+E+L+ + +I+QREIG+ Sbjct: 128 KQRGIVIIGGATGSGKSTTLAAMVEHVNTSVRKHIVTIEDPIEFLFTDKESIIEQREIGI 187 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 T++SGLR LR+DPDVI++GE+RD+E+ A++AA G LV TLHT Q+V+R+ Sbjct: 188 DTATYSSGLRHVLRQDPDVIVIGEMRDAESAHAAMSAANIGRLVFTTLHTADTIQSVQRV 247 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP+ E+D R A +L V+ Q+L +Q G + E+L+N+P++ +I E + Sbjct: 248 LEFFPSSERDFARRLFAETLTGVVCQRLVRSEQSGTIPAAEVLLNSPSIARMIAEEHLDK 307 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++ G GM TF Q V EGR+ Sbjct: 308 IRGALELGGPDGMQTFDQHLNELVREGRI 336 >UniRef50_C4V5N5 Tfp pilus assembly protein PilT n=2 Tax=Selenomonas RepID=C4V5N5_9FIRM Length = 332 Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 132/307 (42%), Positives = 187/307 (60%), Gaps = 7/307 (2%) Query: 14 NVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRAILLENGQLDFAV 70 N SDLH + R G + A F P +E+ L +QRA LL G +DFA Sbjct: 18 NASDLHAAPCQHVQIRRDGNLMAENF-VPSGAFMEQCAECMLSAEQRA-LLRAGDVDFAW 75 Query: 71 SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATG 130 + E +R RG+ + G+SLALRLLP +++G P+ L L + +GL+L+ GATG Sbjct: 76 -VWEKRRFRGNFYRTHDGLSLALRLLPERIMTPDEIGMPSALRTSLDAHDGLVLLCGATG 134 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 +GK+TTLAA++ +N AHI+TLEDPVEY++A R QRE+G +F + +R+AL Sbjct: 135 AGKTTTLAALIDAINHVRSAHIITLEDPVEYIFAPDRSFFSQRELGHDFASFPNAVRSAL 194 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 REDPD++L+GE+RD T+ AL AA TG LV+ TLH AAQA R+ FPA +D VR Sbjct: 195 REDPDLLLVGEIRDRATMEAALLAATTGILVVGTLHASSAAQAARRVESLFPADVRDAVR 254 Query: 251 NQLAGSL-RAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 Q A ++ R + Q+L + GRVA FE+L TPAV N++R+G+ QL ++ +G G Sbjct: 255 AQFADAMQRGIFVQRLLPRRGGGRVAAFEVLSATPAVRNILRQGRYEQLTALMMSGSAQG 314 Query: 310 MITFQQS 316 M T + + Sbjct: 315 MQTMEAA 321 >UniRef50_Q1ITV6 Twitching motility protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ITV6_ACIBL Length = 391 Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 9/325 (2%) Query: 9 LSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQRAI--LLE 62 L V VSDL + + + A P D + + + ++++A L E Sbjct: 30 LKVSEKVSDLIFSPGRAPQVELNSALVAVPGLPTLMPVDTRRIAGDLMGNNEQATTSLRE 89 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 G D + SLA R R + F+QR ++ +R++P P EQL P L ++ K NG+ Sbjct: 90 KGSADLSYSLARESRFRVNIFSQRGSYAIVMRVIPHSVPTFEQLNLPPQLADITKLINGI 149 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LVTG TGSGKS+TLAA++ +N HI+T+EDP+E+L+ ++C I QRE+ +F Sbjct: 150 VLVTGPTGSGKSSTLAAIINKVNLEKAWHIVTIEDPIEFLHPHKQCTIHQRELHSDTPSF 209 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 A LRAALR+ P VIL+GE+RD ET+ +AL AAETGHLV++TLHT A++ VER++ +FP Sbjct: 210 ALALRAALRQAPKVILVGEMRDRETMEIALEAAETGHLVMSTLHTTDASKTVERIIGTFP 269 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH--QLP 299 ++ +R +LA S R ++SQ+L K + GRVA E+L +T + +G+ L Sbjct: 270 ISDQHIIRIRLAKSFRYIISQRLMPKKDKTGRVAAIEILKSTIRTREYVEKGENEGKTLL 329 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEG 324 ++ G GM F + + EG Sbjct: 330 DAMRDGDLDGMQCFDDVIERMIREG 354 >UniRef50_B9YDY2 Putative uncharacterized protein n=6 Tax=Bacteria RepID=B9YDY2_9FIRM Length = 357 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 128/337 (37%), Positives = 194/337 (57%), Gaps = 16/337 (4%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD----TPDVEE-LLREWLDDD 55 M+ I+ +V SD+ + + P +I G M D TP + E L++E Sbjct: 1 MDCPTILQQAVDRRASDIFIVAGTPLTIKINGEM--VQLDDQRLTPAMTEALIQEIFKLS 58 Query: 56 QRAI---LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVL 112 Q L + G+ DF+ SL++ R R + + QR ++ LR++ P +L + Sbjct: 59 QNRTMDRLHQTGEDDFSFSLSQMGRFRVNVYRQRGSLAAVLRVVRFVLPDANELH---IG 115 Query: 113 PELLKS---ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 PE+L + GL+L+TGA GSGKSTTLA ++ +N HI+T+EDP+E L+ Q+ + Sbjct: 116 PEILSFSELKKGLVLITGAAGSGKSTTLACLIDAINHSRSGHIITIEDPIEVLHRHQKSI 175 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 + QREIG + L AALRE PDVIL+GE+RD ET++ L+AAETGHLV ++LHT G Sbjct: 176 VSQREIGQDTPDYIHALTAALREAPDVILVGEMRDLETMQTVLSAAETGHLVFSSLHTTG 235 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNL 289 AA + R++D FPA+++ +R QL+ L+A++SQ+L G + FE++ AV Sbjct: 236 AANTINRIIDVFPAEKQQQIRVQLSMVLQAIVSQQLIPAVGGGLIPAFEIMKVNNAVQTQ 295 Query: 290 IREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 IRE K HQ+ + IQ + GMIT S + + GR+ Sbjct: 296 IRENKIHQIDNTIQANAREGMITMDASLLNLLKAGRI 332 >UniRef50_C5T541 Twitching motility protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T541_ACIDE Length = 392 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 118/320 (36%), Positives = 186/320 (58%), Gaps = 7/320 (2%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQRAILLEN 63 +AL+V+ SDL L + P + +G + DV ++ + Q + Sbjct: 16 LALTVREGASDLFLLAGAPPTLKRQGAFVPITKVAVSAEDVRTMVYSIMRKAQIEEFEAS 75 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLI 123 + DF+ + R R + QR + + +R + + P L++LG P+VL +L + GL+ Sbjct: 76 RECDFSFQTPDQARFRVNVHLQRGNVGVVIRHVTARIPSLDELGLPSVLKQLAFLKGGLV 135 Query: 124 LVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFA 183 L GA GSGK+TTLAAM+ Y N+ HILT+EDP+EYL+A ++ L+ QRE+GL ++ Sbjct: 136 LTVGAAGSGKTTTLAAMLDYRNERTPGHILTVEDPIEYLHAHKKSLVTQREVGLDTASYD 195 Query: 184 SGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPA 243 LR A+RE PDVI++GE+RD T++ AL AE+GHL ++TLH A QAV+R+V+ FP Sbjct: 196 EALRRAMREAPDVIMIGEIRDRATMQHALHYAESGHLCVSTLHASNANQAVQRIVNFFPE 255 Query: 244 QEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 Q + + L+ +L+AV++Q+L Q V E+++ TP V LI++G+ ++ I Sbjct: 256 QAQRQLLMDLSMNLKAVVAQRLIKGVQGSMVPAMEVMLLTPFVSELIQKGEVDEIKTAIA 315 Query: 304 TGQQVGMITFQQS----YQH 319 + GM TF QS Y+H Sbjct: 316 RSGEQGMCTFDQSLFELYEH 335 >UniRef50_UPI0001746A79 hypothetical protein VspiD_01995 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746A79 Length = 357 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 129/324 (39%), Positives = 185/324 (57%), Gaps = 16/324 (4%) Query: 4 EEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLEN 63 + I+ +S +SD ++ P +R+ G++ +D E + AI + Sbjct: 15 QRILQISQNSGISDFYITPWEPLVYRLNGKLY---YDVYTYEPTV---------AIEAKP 62 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLG-APTVLPELLKSENGL 122 G D+AVS+ +R R + + R LRLLP + P LE + P + L+++NGL Sbjct: 63 GTQDYAVSMG-GRRYRVNRLSTRGRSRWVLRLLPENIPTLENIYLPPPAIKSFLEAKNGL 121 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ-RCLIQQREIGLHCMT 181 LV GATGSGKSTT+AA+V + H++T EDP+EYLY LI QREIG + Sbjct: 122 FLVCGATGSGKSTTIAALVLERAKRRQEHVITFEDPIEYLYPQGLPSLISQREIGSDELD 181 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 F + LRAALR+ PDVI++GE+RD ET +AL AAETGHLV+ATLHT AAQ V+R + Sbjct: 182 FGTSLRAALRQAPDVIVVGEIRDGETAEIALQAAETGHLVVATLHTSSAAQTVQRYLKLI 241 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQLPH 300 ++ + A S R +L Q+L D Q + R A+ ELL+ +V +IR G+ +L H Sbjct: 242 SSERLENAMLSFADSFRGILCQRLLADDQKQRRFAIHELLLPYDSVCGVIRRGEFKKLDH 301 Query: 301 VIQTGQQVGMITFQQSYQHRVGEG 324 ++ G GMI+F +S Q R EG Sbjct: 302 ELEAGMTRGMISFDRSLQQREYEG 325 >UniRef50_C0AEU6 Type IV pilus retraction protein PilT n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEU6_9BACT Length = 352 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 8/320 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 + +++A + +H SDLHL RI G + A PF + L++ QR Sbjct: 5 LSQLLAAASEHKASDLHLIVGVAPTLRIHGEIILANHDPFSADISRAITDTLLNEKQREA 64 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGI-SLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + +L ++ + R+R + + +R+GI ++R ++LG P + ++ + Sbjct: 65 FARDWELCISLLHPDAGRVRVTIY-RRNGIPEYSIRFCGDRIYTRDELGLPAKIDDIARR 123 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 NGLILVTG TGSGK+TTL MV +N I+T+EDP+E+++++ R +I Q+E+ Sbjct: 124 RNGLILVTGPTGSGKTTTLNYMVDLINSERRCKIITIEDPIEHVHSNNRAIIVQQEVLSD 183 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA L ALR+DPDVI++GE+RD I ALTAAETGHLVLATLH+ A+ A+ER++ Sbjct: 184 THSFARALNHALRQDPDVIVVGEMRDHAAIMTALTAAETGHLVLATLHSPTASHAIERII 243 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKL--EVDKQEGRVALFELLINTPAVGNLIREGKTH 296 S+ + V QLA SL+A+L+Q L VD Q RV ELLI PAV N+IRE K H Sbjct: 244 GSYEGNAQRQVILQLANSLQAILAQDLVPGVD-QTRRVLACELLIPNPAVRNIIRENKLH 302 Query: 297 QLPHVIQTGQQVGMITFQQS 316 QL + +QTG + GMI S Sbjct: 303 QLVNSLQTGSREGMILMDDS 322 >UniRef50_Q2ILF7 Twitching motility protein n=5 Tax=Myxococcales RepID=Q2ILF7_ANADE Length = 370 Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 123/324 (37%), Positives = 190/324 (58%), Gaps = 8/324 (2%) Query: 9 LSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAIL-LENG 64 L+VK SD+H +P +R+ G + +A P D E + L L+ Sbjct: 18 LAVKRQASDVHFEVGYPPTYRVFGELLSAKYPPLTHADTEAIANFVLQAPGSGFTPLDFR 77 Query: 65 QLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLIL 124 ++D + SL R R S F QR +R +P P + L P V+ + ++ GLI Sbjct: 78 EVDRSYSLPGVSRFRASIFKQRGSWGAVMRTIPFQIPDFDTLNLPPVIRTIAEARRGLIC 137 Query: 125 VTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFAS 184 VTGATG+GKSTT+A+++ + Q H++T+EDP+E+++A + L+ QRE+G +++ Sbjct: 138 VTGATGNGKSTTVASIINTIIQQERLHVVTVEDPIEFIFAGGKGLVIQREVGSDTASYSD 197 Query: 185 GLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQ 244 LRAALR+DPD+I++GELRD E + L AAETGHLV+ +LHT +AV R+V FPA Sbjct: 198 ALRAALRQDPDIIMVGELRDREAADICLKAAETGHLVITSLHTPDVPRAVGRIVGLFPAD 257 Query: 245 EKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREG-KTHQLPHVI 302 E+D VR +LA +L+AV++ +L + G + E L+ T +V LIR+G K ++L + Sbjct: 258 EQDSVRARLADNLQAVIALRLLMRADATGLIPAVESLLATTSVRELIRDGSKINELRTYM 317 Query: 303 QT-GQQVGMITFQQSYQHRVGEGR 325 T G +GM +F Q Y +R+ E + Sbjct: 318 DTAGADLGMHSFDQ-YLYRLHEAK 340 >UniRef50_D0L1U2 Twitching motility protein n=6 Tax=Gammaproteobacteria RepID=D0L1U2_HALNC Length = 387 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 106/273 (38%), Positives = 168/273 (61%) Query: 44 VEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL 103 VE + L +Q + +L+ A+S R R + F QR S+ +R + S P++ Sbjct: 50 VEGYAKSILSPEQTDAFYRDLELNLALSRPSLGRFRVNIFMQRGEWSMVIRFIKSEIPRI 109 Query: 104 EQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY 163 L P V+ +L++ GLILV GATGSGKSTTLAAM+ Y + HILT+EDP+EY + Sbjct: 110 ADLNLPQVIEKLVEERRGLILVVGATGSGKSTTLAAMIDYRAEARPGHILTIEDPMEYAF 169 Query: 164 ASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLA 223 + ++ QRE+G+ ++A+ L+ ALRE PDVI++GE+RD T+ AL A+TGHL ++ Sbjct: 170 RHRNSVVNQREVGVDTHSYAAALKEALREAPDVIMIGEVRDKATMEHALAYADTGHLCVS 229 Query: 224 TLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINT 283 TLH A QA++R++ FP + +D + L+ +LRA++SQ+L + Q RV E+++NT Sbjct: 230 TLHATNAHQALDRIIRFFPPESRDQLLMDLSLNLRAIISQRLVIGSQGMRVPAVEIMVNT 289 Query: 284 PAVGNLIREGKTHQLPHVIQTGQQVGMITFQQS 316 P + +LI+ G+ ++ ++ + G TF S Sbjct: 290 PFIADLIKRGEIDEMKEAMEKNELEGSQTFDMS 322 >UniRef50_D2QYW4 Twitching motility protein n=4 Tax=Planctomycetaceae RepID=D2QYW4_9PLAN Length = 395 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 115/324 (35%), Positives = 176/324 (54%), Gaps = 12/324 (3%) Query: 11 VKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE-----ELLREWLDDDQRAILLENGQ 65 VK SDLH+ P R+R E P + P++E +LL ++D R I + G Sbjct: 42 VKFEGSDLHMKVGRPPMIRVRN--ELRPLNHPNIERIEMAKLLVPMMNDRNRRIFDDEGG 99 Query: 66 LDFAVSL---AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 DF+ S R R + Q + L R + + P E L P + +L + G+ Sbjct: 100 ADFSHSCDVDGTTWRFRVNLLQQNGCMGLVARRINNKIPNFEGLFLPAAIEKLCFYDQGM 159 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +L+ G TGSGKSTT+A+M+ ++N+ HILTLEDP+E+++ + LI QREIG F Sbjct: 160 VLLAGVTGSGKSTTIASMLDFINRRERIHILTLEDPIEFIFTEDKSLINQREIGFDVKDF 219 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 ++ A+REDPDV+L+GE+RD ET A+ AAETGHLV T+H A + R++D FP Sbjct: 220 KIAMKHAVREDPDVMLVGEMRDEETFMTAIHAAETGHLVFGTIHASSAPSTIGRILDLFP 279 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQEG--RVALFELLINTPAVGNLIREGKTHQLPH 300 +R+ +A +++ +++QKL + G RV E++ TP + L+ E +LP Sbjct: 280 EAMHKAIRSAIAFNMKGIVAQKLLKSIKPGVPRVPTCEIMTFTPMIKKLVLESHDSKLPD 339 Query: 301 VIQTGQQVGMITFQQSYQHRVGEG 324 I+ G GM F S + + +G Sbjct: 340 AIRIGAADGMQDFTMSLKQLIDDG 363 >UniRef50_C3XDC6 Twitching motility protein PilT n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDC6_9HELI Length = 407 Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 118/272 (43%), Positives = 165/272 (60%), Gaps = 7/272 (2%) Query: 44 VEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL 103 + +L +E D +++ LEN Q +V + E R R S F +G S A+R+ + P L Sbjct: 142 INKLFQEIRDYNRKD--LENEQ-SVSVYIGE-VRCRISKFTTINGASYAIRIYNNQMPTL 197 Query: 104 EQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY 163 + + AP L L ++ +GLILV G TG+GKSTTLAAM+ ++N HILTLEDP+EY++ Sbjct: 198 DSIQAPLALANLCENTSGLILVCGTTGAGKSTTLAAMINHINTTTKKHILTLEDPIEYIH 257 Query: 164 ASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLA 223 S + L+ QREIGLH +F S L A+LREDPDVIL+GE+ E + LA+T A +GHLVLA Sbjct: 258 KSNKSLVNQREIGLHSKSFESSLIASLREDPDVILIGEILSPEVLTLAITHALSGHLVLA 317 Query: 224 TLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINT 283 + H A+ R++ Q +R LA L+ +++QKL D E A FE+LI Sbjct: 318 SFHANNCMDAITRMIGM--KQSDCNIRANLATCLQGIITQKL-YDNGERLTADFEILIAN 374 Query: 284 PAVGNLIREGKTHQLPHVIQTGQQVGMITFQQ 315 PAV LI++ K QL I G+ VGM F + Sbjct: 375 PAVSALIKDDKIWQLDSQISMGKSVGMQHFSK 406 >UniRef50_Q2RY72 Type II secretion system protein E n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RY72_RHORT Length = 348 Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 191/324 (58%), Gaps = 13/324 (4%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM-----EAAPFDTPDVEELLREWLDDD 55 M++ ++ L+ + + SDLHL RI GR+ + A D + L+ + LD Sbjct: 1 MDLTSLLRLAHQRSASDLHLAVGMAPSLRIDGRLSEMTPQGALIDRSAIMGLIAQALDQP 60 Query: 56 QRAILLENGQLDFAVSLAENQ----RLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTV 111 R L G+ + +SL R+R +A G +L LRLL P E LG P Sbjct: 61 ARERLERLGEAEAMLSLPMAADPPLRVRVTACRALAGPTLVLRLLADRPPAAESLGLPPA 120 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 + L +GLIL+ GA G+GK+TT A ++ +N+ HILT+EDPVE+ +A + Sbjct: 121 ITALTGRRDGLILIAGAAGAGKTTTAACLIDTINRAGGRHILTVEDPVEFRHAPLGGPVT 180 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 QRE+G H +FA+GL AALR DPDV+L+GE+RD +T+ LAL A TGHLV+ATLH AA Sbjct: 181 QREVGTHTASFAAGLTAALRADPDVVLIGEIRDPQTLALALRTAGTGHLVIATLHAASAA 240 Query: 232 QAVERLVD--SFP--AQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVG 287 A++R +D SF A +D R LA +L AV+ Q+L + GR+ LF LL+ +PAV Sbjct: 241 GAIDRALDLLSFDGGAPGRDAAREALATALAAVVYQRLLARRGGGRIGLFSLLLASPAVK 300 Query: 288 NLIREGKTHQLPHVIQTGQQVGMI 311 IR+G+T QLP +++ G+++GM+ Sbjct: 301 AAIRDGQTRQLPALMEIGRRLGML 324 >UniRef50_Q47FA9 Pilus retraction protein PilT n=7 Tax=Betaproteobacteria RepID=Q47FA9_DECAR Length = 395 Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 109/321 (33%), Positives = 188/321 (58%), Gaps = 9/321 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT----PD-VEELLREWLDDD 55 M ++++ L + SD+ + + P +I+G P + PD +E++ E + D Sbjct: 1 MILDKLFQLMAEKQASDIFISAGAPIHIKIQGN--TIPVNQQVMLPDMIEKIAYELMSPD 58 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 Q +++ + + R + F QR S+ +R + + P +++LG P +L EL Sbjct: 59 QIKTFEATMEMNLSFGVPNVGNFRVNIFRQRGSTSIVIRFILGNIPAMDELGLPNILGEL 118 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + + GLIL+ GATGSGKSTTLA+M+ + N + HILT+EDP+E+L+ ++ ++ QREI Sbjct: 119 IMEKRGLILIVGATGSGKSTTLASMLDHRNANRSGHILTVEDPIEFLFKHKKSIVNQREI 178 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G+ M + + L+ A+R+ PD IL+GE+RD ET++ A+ A+TGHL LATLH + A+ Sbjct: 179 GMDTMDWQAALKNAMRQAPDCILIGEIRDKETMQAAIAYAQTGHLCLATLHANNSYHALN 238 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG-RVALFELLINTPAVGNLIREGK 294 R++ FP + + + L+ +LRA++SQ+L V K +G R+ E+++NT + LI G+ Sbjct: 239 RIISFFPLENRPALFLDLSVALRAIISQRL-VKKPDGKRIPTCEIMLNTRHISELIERGE 297 Query: 295 THQLPHVIQTGQQVGMITFQQ 315 + ++ G TF+Q Sbjct: 298 VQGIKDAMEQTLAPGSQTFEQ 318 >UniRef50_B1Y6E6 Twitching motility protein n=14 Tax=Burkholderiales RepID=B1Y6E6_LEPCP Length = 404 Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 116/329 (35%), Positives = 183/329 (55%), Gaps = 9/329 (2%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM------EAAPFDTPDVEELLREWLDDD 55 N+E I+ L + SD+ L + P +I G++ + AP T +LL E L Sbjct: 4 NLERILRLMAEKRASDVFLSANMPVLIKIHGQIMQLTQDQLAPNQT---RQLLAEMLTHT 60 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 Q L E G+L+ + L R SAF QR I+ R +P+ P +E L P LP + Sbjct: 61 QLEDLDETGELNVGLQLPGVGSFRLSAFKQRGTIAAVFRCMPTEVPTIESLNLPDSLPAI 120 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + GL+L+ GATGSGKSTTLA+M+ N+ HILT+EDP+E+L+ + + ++ QRE+ Sbjct: 121 ALARRGLVLMVGATGSGKSTTLASMIQQRNRTVAGHILTIEDPIEFLFTNYKSVVNQREV 180 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G + GL+ A+R+ PD I +GE+RD ET+ AL+ A +GHLVL+TLH + A+ Sbjct: 181 GRDVQSLQIGLKNAMRQAPDCIFIGEIRDRETMSAALSYALSGHLVLSTLHANNSHHALN 240 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R++ + + + + + LA L+A++SQ+L + GR+ E+L+NT + LI +G Sbjct: 241 RILSFYTPEARPALMSDLASGLKAIVSQRLLRSTRGGRIPACEVLLNTQLIAELIDQGNF 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 + ++ G TF+Q + EG Sbjct: 301 GGVKEAMERSIAEGSQTFEQDLARLISEG 329 >UniRef50_D1BN08 Type II secretion system protein E n=3 Tax=Veillonella RepID=D1BN08_VEIPT Length = 339 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 125/324 (38%), Positives = 191/324 (58%), Gaps = 25/324 (7%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPF--DTPDVEELLR-------EWL 52 ++E IV ++++ + +D+HL P R ++A F T +E++LR EW Sbjct: 9 SLETIVEMAIQLSSTDIHLQCGQPIYLRHGDGLKATSFMCTTELIEDILRRCGIASYEW- 67 Query: 53 DDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVL 112 LD A S R+R + I LRLL +L+ +L Sbjct: 68 -----------QSLDEACSCC-GVRIRIHLYRANQTICGTLRLLCHQQLKLDDNSEGQLL 115 Query: 113 PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQ 172 +L ++ +GL+LV G TGSGKS TLA + Y+NQ + HI+TLEDP+E+ +A ++ LI Q Sbjct: 116 QKLCEAHDGLLLVCGPTGSGKSFTLACCIDYINQTMERHIITLEDPIEFEFAPKKSLIHQ 175 Query: 173 REIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQ 232 R++G T + G+R ALREDPDVI++GELRD ET+ AL AAETGHLV+AT+HT+ A Sbjct: 176 RQLGADINTMSDGIRDALREDPDVIMVGELRDRETLEAALHAAETGHLVMATMHTQRAVM 235 Query: 233 AVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIRE 292 AV R++ FP ++++ VRNQ++ LRAV+ Q+L + + + + ++L+NT AV NLIR Sbjct: 236 AVHRMISLFPGEQQEEVRNQISQVLRAVICQRL-LRWNKKFITIRDILLNTHAVANLIRT 294 Query: 293 GKTHQLPHVIQTGQQVGMITFQQS 316 K Q+ + +T Q+ M T + + Sbjct: 295 RKEPQIISIQET--QLPMKTLEMA 316 >UniRef50_B9XSZ5 Type II secretion system protein E n=1 Tax=bacterium Ellin514 RepID=B9XSZ5_9BACT Length = 401 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 120/318 (37%), Positives = 182/318 (57%), Gaps = 4/318 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG--RMEAAPFDTPDVEELLREWLDDDQRA 58 M++ ++A + + SDLHL PA R+RG R AP + + +E + D Sbjct: 1 MDLYSLIATAKANGASDLHLEPTLPAAIRVRGSLRTVGAPIAGKALLDAAQEIIGVDAWP 60 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + LE D + S+ + R R + GI +A+RLL S +E+L +L Sbjct: 61 LFLERRSYDLSKSI-QGVRCRINVLQTSRGIGMAVRLLTSFQATIEKLNLHPDFKKLTNH 119 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 NGLIL++G TGSGKS+T+AA + +N HILT+E P+EYL+ R I+QRE+G Sbjct: 120 SNGLILISGPTGSGKSSTMAAFIQEINLAETRHILTVESPIEYLFKPHRGYIRQREVGRD 179 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F L A+REDPDV+++GE+RD ET+RL L AETGHLVLAT H+ +A++R+V Sbjct: 180 TPSFEQALMDAMREDPDVLMVGEMRDPETMRLTLNVAETGHLVLATAHSGSTIEALQRMV 239 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKTHQ 297 +FP + ++ V QLA L + Q+L+ + +V E+LI T V N IR G+ + Sbjct: 240 AAFPPEMQNNVCAQLADCLVVAICQRLQYRADLKLQVPECEVLIPTIPVKNFIRRGEFFK 299 Query: 298 LPHVIQTGQQVGMITFQQ 315 + ++ G + GM T+Q+ Sbjct: 300 IMSAMEIGAEQGMWTYQR 317 >UniRef50_C8NB70 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB70_9GAMM Length = 432 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 107/322 (33%), Positives = 194/322 (60%), Gaps = 10/322 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP--FDTPDVEELLREWLDDDQRAIL 60 +++VA + + SD+ + S + G++ + DV L+ + Sbjct: 36 FDKLVAHAAEKKASDIFINSENYISIKTDGQLNYTKKYMEEGDVYNLIEVISRPEAFREF 95 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS-- 118 L N +L+ V + LR + + Q++ L LRL+P+ P+L+ L P +P++LK Sbjct: 96 LRNHELNMMVEVPNVTYLRVNVYLQKNVPGLVLRLIPAMIPKLDDLELP--VPDILKKIS 153 Query: 119 --ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + GL++V GATG+GKSTTLA+M+ + N+++ HI+T+EDP+E+++ ++ ++ QRE+G Sbjct: 154 MVKRGLVIVIGATGNGKSTTLASMIDHRNENSSNHIITVEDPIEFVHKPKKSVVIQREVG 213 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + ++ + L+ +LR+ PDVIL+GE+RD +T++ A+ AETGHL LATLH + QA+ER Sbjct: 214 IDTASYGTALKNSLRQAPDVILIGEIRDVDTMQYAMHFAETGHLCLATLHATNSVQALER 273 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKT 295 + + FP +++ ++ +LA +L +++Q+ L + GR+ E+++NTP + +LI EG Sbjct: 274 IYNFFPREQRHQIQPELAENLHCLITQRLLPRSDRPGRIVAMEMMMNTPYISHLISEGDL 333 Query: 296 HQLPHVIQTGQQV-GMITFQQS 316 +P ++ G G+ TF S Sbjct: 334 GSIPEAMERGNPAEGVFTFDHS 355 >UniRef50_A5EV69 Twitching motility protein PilU n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EV69_DICNV Length = 406 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 107/328 (32%), Positives = 190/328 (57%), Gaps = 6/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 + +V + + SD+ + S + G + + A D DV + + + Sbjct: 12 FDNLVLFAHQREASDIFINSQNNVAVKTNGELHFLQEAFLDEEDVMNIAKAISRPEAFEE 71 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT--VLPELLK 117 L+ + + V + LR + + Q++ + +RL+P+ P +E+L P +L EL Sbjct: 72 FLKTYECNIMVEVPNVTYLRVNIYMQKNMPGIVMRLIPAKIPAIEELNLPQPHILKELSL 131 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+++ GATG+GKSTTLA+MV + N+ HI+T+EDP+E+++ S+ C++ QRE+G+ Sbjct: 132 VKRGLVIIIGATGNGKSTTLASMVDFRNERTKNHIITVEDPIEFMHKSKSCVVIQREVGV 191 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 T+ + L+++LRE PDVIL+GE+RD ET+ A+ AETGHL LATLH + QA+ER+ Sbjct: 192 DTKTYGAALKSSLREAPDVILIGEIRDVETMGYAMQFAETGHLCLATLHATNSVQALERI 251 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 + FP +++ ++ L+ +LR +++Q+L GR E+++NTP + LI +G+ + Sbjct: 252 YNFFPLDQREKLQLDLSENLRCLITQRLIPKIGGGRAVAMEMMMNTPYIQQLIHDGQVDK 311 Query: 298 LPHVIQTGQQV-GMITFQQSYQHRVGEG 324 + V++ G G+ +F + EG Sbjct: 312 IHEVLERGDATRGVFSFDRCIFDLYEEG 339 >UniRef50_A9LZU9 Twitching motility protein PilU n=30 Tax=Neisseriaceae RepID=A9LZU9_NEIM0 Length = 408 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 186/316 (58%), Gaps = 8/316 (2%) Query: 14 NVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEE---LLREWLDDDQRAILLENGQLDFAV 70 N SD+ + +P +I + P EE + ++ +Q I +G+++++V Sbjct: 50 NASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRDGEINYSV 109 Query: 71 SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATG 130 R R +A+ + L LR + PQ+++LG P L +L + GL+++ G TG Sbjct: 110 QSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRGLLIIVGPTG 169 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGKSTT+A M+ + N+ +HI+T+EDP+E++Y +RC+ QREIG+ + + + ++ A+ Sbjct: 170 SGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDTINWQTAVQNAM 229 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 R+ PDV+ +GE+R E++ A+ A+TGHL + TLH A Q++ER+++ +P ++ + + Sbjct: 230 RQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERILNFYPKEQHNQIL 289 Query: 251 NQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +A +L ++ Q+L + + + GR A+ +LLINTPA+ + I +G + +++T + G Sbjct: 290 IDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGDLMNISKIMETAKTDG 349 Query: 310 MITFQQS----YQHRV 321 M T Q+ Y+H + Sbjct: 350 MQTMDQNLFELYRHGI 365 >UniRef50_C9LPW1 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LPW1_9FIRM Length = 338 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 122/273 (44%), Positives = 167/273 (61%), Gaps = 8/273 (2%) Query: 33 RMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLA 92 R E + FD L L D+R + E G D + S+ EN R R + A Sbjct: 43 RAEKSFFDM-----LFHSSLSPDKRKVYEEKGACDTSFSIGEN-RFRLHLYRAGGKDCAA 96 Query: 93 LRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHI 152 LR+LP ++E+ ++ K +GLIL +G TGSGKSTT+A ++ + + HI Sbjct: 97 LRVLPV-LDRVEKDPDEKWFEKIAKLSSGLILFSGPTGSGKSTTMARVLEGIGKEKARHI 155 Query: 153 LTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLAL 212 +TLEDPVEY+ ++ + L++QREIG ++FA G+R +LREDPDVI +GE+RD ETI AL Sbjct: 156 VTLEDPVEYVLSAGKSLVRQREIGRDAVSFAEGVRESLREDPDVIAVGEMRDRETIAAAL 215 Query: 213 TAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG 272 TAAETGHLVL TLH A +AV R+V FPA+E++ VR ++ LR V +Q+L Sbjct: 216 TAAETGHLVLGTLHNGRALEAVGRMVHVFPAEEQNEVRLIISSVLRCVSAQRL-WRMGTK 274 Query: 273 RVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 V L E+L NTPAV NLIREGK Q+ ++TG Sbjct: 275 TVLLREILTNTPAVANLIREGKEAQVLSYMETG 307 >UniRef50_D1KBX3 Tfp pilus assembly protein PilT (Fragment) n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KBX3_9GAMM Length = 240 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 107/223 (47%), Positives = 143/223 (64%), Gaps = 6/223 (2%) Query: 12 KHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD----DDQRAILLENGQLD 67 ++ SD+HL P RI G M P + + L+E+ D +DQ+ L E +D Sbjct: 11 EYKFSDIHLKEDQPLILRINGEM-TKPSEDIISAQALKEFADKALTEDQKTHLEEIRDVD 69 Query: 68 FAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTG 127 A+ A R R + F G+S LR + + P +E L P ++ E+ + NGLILVTG Sbjct: 70 LAIE-AGAYRFRVNFFYTSDGLSAVLRKIETEIPTMESLKLPFIMQEMAEKPNGLILVTG 128 Query: 128 ATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLR 187 TGSGKST+LAA++G +N HILT+EDP+EY++ S+ C + QRE+G +FAS LR Sbjct: 129 PTGSGKSTSLAAIIGEINATRKGHILTVEDPIEYIHHSKECTVSQREVGRDAHSFASALR 188 Query: 188 AALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 A+LREDPDVIL+GE+RD ETI+LALTAAETGHLV TLHT GA Sbjct: 189 ASLREDPDVILVGEMRDRETIQLALTAAETGHLVFGTLHTSGA 231 >UniRef50_UPI0001BC5494 hypothetical protein F3_04365 n=4 Tax=Fusobacterium RepID=UPI0001BC5494 Length = 322 Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 191/332 (57%), Gaps = 21/332 (6%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDD---QRAI 59 ME++ K SDLH+ +R G D EE++ L D+ I Sbjct: 1 MEKLFVKYRKLGASDLHIREEAKLCYRKDG-------DLYFSEEVVSTKLFDEFCQSLGI 53 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT----VLPEL 115 L E + D + + R R + G L++R++ P+ P+ VL +L Sbjct: 54 LKEEQERDSSYEDSFGHRYRLNFAKGEKGRMLSVRIISEFLPEF-----PSELYIVLKDL 108 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 S++GL+LVTG+TGSGKSTTL + N+ I+ LEDP+E+ Y ++ L QREI Sbjct: 109 FTSKHGLVLVTGSTGSGKSTTLRFFLEQYNESYAKKIICLEDPIEFYYQEKKSLFFQREI 168 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +F + ++AALR+DPD++L+GE+RD +++ AL+ AE+GHLV +TLHT + + Sbjct: 169 GRDSESFETAMKAALRQDPDILLIGEIRDLQSLYTALSFAESGHLVFSTLHTGNCVETIH 228 Query: 236 RLVDSFPAQEK-DPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 +++ SF ++EK + +R +L+ SLR ++Q+L K+ GRV +FELL NT AV N+I G+ Sbjct: 229 KMI-SFSSKEKQEEIRQRLSSSLRWTIAQELVKGKEGGRVPIFELLKNTKAVANMISSGR 287 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 QLP V+++ GM + +QS ++ + +G+L Sbjct: 288 EVQLPSVLESSASQGMCSKEQSRENWIRKGKL 319 >UniRef50_C1XRI8 Pilus retraction protein PilT n=2 Tax=Meiothermus RepID=C1XRI8_9DEIN Length = 374 Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 187/318 (58%), Gaps = 5/318 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD--TPDVEELLREWL-DDDQR 57 M E++A V SD+H+ + P R+ GR++ TP L + + D+ Q+ Sbjct: 1 MTFPELLAQLVSQGASDIHIHAGMPLMVRLHGRLQPIGQSKLTPQWTATLVDLMCDERQK 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + + Q+D A SL R R + F QR +S +R++ S +L+ + P E + Sbjct: 61 VLFKQRYQVDIAYSLPGVARFRVNLFRQRGSVSAVMRVINSDEEKLKIVSLPQETIEYFR 120 Query: 118 S-ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 E GL+L+TG TGSGKSTTLA ++ +N+ D I+T+EDP+EYL+ ++ +I QRE+G Sbjct: 121 DQEKGLVLITGPTGSGKSTTLARILDEINRTHDKMIITIEDPIEYLHKPKKSVIVQRELG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 ++F L AA+R+DPDVI++GE+R+ ET AL AA+TGHLV +T+HT + V R Sbjct: 181 SDTLSFDEALIAAMRQDPDVIMIGEIRNYETAAAALEAAQTGHLVFSTMHTLDTVRTVNR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIRE-GKT 295 ++D FP E++ R A SL ++SQ+L K GRVA+ E+L T + ++I++ KT Sbjct: 241 MMDLFPPHEREVARILFAESLVGIVSQRLLKSKGGGRVAVTEILKGTLRIRDMIKDPAKT 300 Query: 296 HQLPHVIQTGQQVGMITF 313 + L ++ + GM TF Sbjct: 301 YGLYDALRESRLDGMQTF 318 >UniRef50_C6NZC5 Twitching motility protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZC5_9PROT Length = 389 Score = 196 bits (499), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 108/329 (32%), Positives = 184/329 (55%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 M + ++ L+ SDL L P +I G + A D V+ + E + + Q Sbjct: 1 MIITPLLQLAADRQASDLFLSVGAPINIKIDGVVMPVNAQILDEQTVQRIAYEMMTEQQI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + +++F+ + R + F QR +++ +R + +E+L P VL EL+ Sbjct: 61 NEFELHMEMNFSFRVPRVGNFRVNVFRQRSSVAVVIRYVRGDVLNVEELHLPLVLKELVM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+L+ GATGSGKSTTLAAM+ + N+ HILT+EDP+EY++ + ++ QRE+G Sbjct: 121 EKRGLVLMVGATGSGKSTTLAAMIQHRNETQSGHILTIEDPLEYMFRHSKSIVNQREVGT 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ + L +A+RE PDV+++GE+RD ET++ AL A+TGHL L+TLH + A+ R+ Sbjct: 181 DTTSYETALVSAMREAPDVLMVGEIRDRETLKHALIFAQTGHLCLSTLHANNSYHALNRM 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 V+ FP + + + L+ LRAV+SQ+L + Q + E+L+N+ + +LI+ + Q Sbjct: 241 VNFFPYDARPSILSDLSLCLRAVISQRLIRNAQGKLMPAVEVLLNSSLIADLIKSDQIDQ 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + I+ G TF+Q+ G + Sbjct: 301 IRDAIEQSVSPGSQTFEQALYKLFKSGHI 329 >UniRef50_C5V2P0 Twitching motility protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2P0_9PROT Length = 386 Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 106/306 (34%), Positives = 169/306 (55%), Gaps = 7/306 (2%) Query: 16 SDLHLCSAWPARWRIRGRMEAAPFDT-----PDVEELLREWLDDDQRAILLENGQLDFAV 70 SDL P +I G A P ++ ++ + E + Q N +++F+ Sbjct: 16 SDLFFSVGAPVNVKIDG--NAVPVNSQVLSADIIKRIAYEMMSSRQIIEFEANMEMNFSY 73 Query: 71 SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATG 130 R + F QR I++ +R + ++++L P VL L+ + GLILV GATG Sbjct: 74 REEGLGNFRVNIFRQRGDIAIVIRYIRGKISEMDKLHLPPVLKSLIMEKRGLILVVGATG 133 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGKSTTLA+M+ Y ++ HILT+EDP+EYL+ + ++ QREIG + + L + Sbjct: 134 SGKSTTLASMIDYRSRTQTGHILTIEDPIEYLFKHDKSIVNQREIGTDTKNYENALSCGM 193 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 RE PDV+++GE+RD ET++ AL A+TGHL L TLH + A+ R+V+ FP + V Sbjct: 194 REAPDVLMIGEVRDRETLKHALIFAQTGHLCLTTLHANNSYHALNRIVNFFPYDSRQSVL 253 Query: 251 NQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 + L+ LRAV+SQ+L + +V E+L+NT + +LI+ + ++ I G Sbjct: 254 SDLSMCLRAVISQRLVRNVHGKQVPAVEVLLNTTLIADLIKNDEIEKIHEAIDKSVSAGS 313 Query: 311 ITFQQS 316 TF+Q+ Sbjct: 314 QTFEQA 319 >UniRef50_D2L7F7 Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7F7_9DELT Length = 402 Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 121/277 (43%), Positives = 153/277 (55%), Gaps = 4/277 (1%) Query: 44 VEELLREWLDDDQR--AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP 101 E L R L D R A L G D A + R R +A+ + L LR LP P Sbjct: 57 TETLARGLLGRDARLLADLRIRGSCDAAYAHPAGVRFRANAYRAGDSLGLVLRRLPDAPP 116 Query: 102 QLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEY 161 L LG P V + GL+LV GATGSGKSTTL+A+ + H++TLEDPVE Sbjct: 117 PLASLGLPPVFTRMATLAEGLVLVVGATGSGKSTTLSALATAILADRPVHVVTLEDPVES 176 Query: 162 LYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLV 221 L+ R ++ QRE+G +FA G+RAALR+ P VIL+GE RD ET+ AL AAETGHLV Sbjct: 177 LFPPGRGVVSQRELGTDFPSFADGIRAALRQAPHVILVGEARDRETVDAALGAAETGHLV 236 Query: 222 LATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLI 281 LATLHT A AVERL+ F E+ R +LAGSLR V +Q+L GR E+L Sbjct: 237 LATLHTADCAGAVERLLAFFGPSEERLARQRLAGSLRFVAAQRLLPRVGGGRAVSVEVLA 296 Query: 282 NTPAVGNLIREGK--THQLPHVIQTGQQVGMITFQQS 316 T I GK + +++ G+ GM+TF S Sbjct: 297 ATLRTRERILAGKDGSEGFSDILEQGEPYGMVTFDAS 333 >UniRef50_B8HI64 Twitching motility protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HI64_ARTCA Length = 373 Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 114/316 (36%), Positives = 174/316 (55%), Gaps = 10/316 (3%) Query: 16 SDLHLCSA---WPARWRIRGRMEAAP--FDTPDVEELLREWLDDDQRAILLENGQLDFAV 70 SDLHL + W + +E D + ++LR+ + + + A E +LDF+ Sbjct: 34 SDLHLVAGTVPWATVYGKTVHLEGITRVLDADSLSKILRQMVSEQEWAQFWEKKRLDFSY 93 Query: 71 SLAENQRLRGSAFAQRHGISLA-LRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGAT 129 S E RG FA G+ +A R +PS P + LG P V+ + +E GL L G T Sbjct: 94 S-TERANFRGH-FAIAGGVPMAVFRTIPSVVPDFDDLGLPEVIRSFIDAEAGLYLFIGVT 151 Query: 130 GSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAA 189 GSGKS++LAA++ + I T+E P+E+ +++ + L+ QRE+G +FA G+ A Sbjct: 152 GSGKSSSLAALIKLAKEKYAKKITTIEAPIEFRHSNGKSLVVQREVGRDVDSFALGVEDA 211 Query: 190 LREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPV 249 LRE+PD+IL+GE+RD ET+ AL+A +GHLV +TLH A A R++++ PA Sbjct: 212 LRENPDIILVGEMRDPETMSAALSATSSGHLVFSTLHAGSTADAPARILEAMPADRVADT 271 Query: 250 RNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 R QLA SLR V+ QK L V +GRV E+L+ A+ N+I+ T + + + Sbjct: 272 RAQLARSLRGVVYQKLLPVKGGQGRVVATEVLMMNQAISNMIKNNNTEGIAGQL-LAKDS 330 Query: 309 GMITFQQSYQHRVGEG 324 G I F+ S + V +G Sbjct: 331 GSIPFEVSLVNLVMDG 346 >UniRef50_A9EXH6 Putative twitching motility protein PilT n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EXH6_SORC5 Length = 350 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 122/331 (36%), Positives = 185/331 (55%), Gaps = 13/331 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDD-DQRA 58 + +++ ++ + SD+HL P R+RG M D D E R L R Sbjct: 11 LHQLLGKALAAHASDIHLKVGQPPGARVRGDMVYFRVDRIRPEDSEAAARVLLAGRPSRE 70 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +L +LD A + R R + + QR +++ LR +P P E+LG P+ + +++ Sbjct: 71 LLATLQELDAAYVVPGLGRFRVNIYRQRGSLAIILRSIPLKIPTFEELGVPSAVRAMVEH 130 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 ++GL+LV G GSGKSTTLAA VG++N HI+TLEDP+E+++ R + QREIG+ Sbjct: 131 DHGLVLVAGTAGSGKSTTLAAFVGHINATVPRHIVTLEDPIEHVHEDNRSSVSQREIGVD 190 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 F + LR+ALR+DPDV+L+ LRD E++ LAL AAETGHLVLA + + +A+ RL+ Sbjct: 191 TADFPTALRSALRQDPDVVLISALRDGESLDLALHAAETGHLVLAAVSSADVTRALARLI 250 Query: 239 DSFPAQEKDP--VRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGK- 294 A K P VR +LA L+ V++Q+L + G V E+L+ T AV IR + Sbjct: 251 ----ALGKSPSEVRERLADCLQGVVAQRLLPRRDGAGEVLAAEVLVGTAAVREAIRRPEG 306 Query: 295 THQLPHVIQTG-QQVGMITFQQSYQHRVGEG 324 + L +++ G GM TF + V +G Sbjct: 307 SPSLRELMEKGVTPYGMQTFDAHLRQLVAQG 337 >UniRef50_Q0F284 Pilus retraction protein PilT n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F284_9PROT Length = 363 Score = 176 bits (447), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 166/298 (55%), Gaps = 11/298 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAI 59 ++E++ ++ K+ SDL + + R RI G + P D PD + + E + RA+ Sbjct: 7 IDELLLVAGKNGASDLIVRTGDRVRMRINGDIVTVPADKVTVPDRNKTI-EMIRHLVRAL 65 Query: 60 LLENG-----QLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 + LDF +L R + + RL+P P L P V E Sbjct: 66 PTQTEIETIRNLDFHYTLPGAAHFRIHVLRTHNDFGIVARLIPVDIPDFAALRLPPVFEE 125 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA-SQRCLIQQR 173 + NGLIL+ GA GSGKST++AAM+ ++ +H H ++LEDPVE+ Y S R + QR Sbjct: 126 ITGYRNGLILMAGAAGSGKSTSMAAMLNHMIRHRPVHAVSLEDPVEFRYNNSYRGTVSQR 185 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 E+G ++ GL ALRE PD+I+ GE+R E I+LAL AAETGHLV++T+H A Sbjct: 186 ELGSDVASYKQGLSDALRETPDIIVAGEVRGREEIQLALQAAETGHLVMSTVHATTAIGT 245 Query: 234 VERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLI 290 ++R++ SFP E+ +R +L+ +LRA++ QKL KQ +GR+ E++I + + I Sbjct: 246 MQRIMSSFPHDEQAGIRERLSENLRAIIVQKLLPMKQGKGRIVALEIMIRNSVIRHYI 303 >UniRef50_C4XIZ5 Putative twitching mobility protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XIZ5_DESMR Length = 381 Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 132/318 (41%), Positives = 167/318 (52%), Gaps = 9/318 (2%) Query: 8 ALSVKHNVSDLHLCSAWPARWRIRGRME-----AAPFDTPDVEELLREWLDDDQR--AIL 60 AL+ SDL A PA + G AP P + L RE L + R A L Sbjct: 13 ALAAAPRASDLLFPPAGPAGALVDGAFTPLPGLGAPTSPPTTDALARELLGQNARLAADL 72 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 G D + + R R + G+ L LR LP+ L L P L + Sbjct: 73 TRLGSCDVSYRHSSGWRFRANIHRAGQGLGLVLRRLPAAPAPLAALTLPPAAARLTELAE 132 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GL+LV GATGSGKSTTLAA+ + H++TLEDP+E L R ++ QRE G Sbjct: 133 GLVLVVGATGSGKSTTLAALAAAILAARPVHVVTLEDPIECLLPPGRGIVTQRERGTDFP 192 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 FA GLRAALR+ P VI+LGE RD +T+ ALTAAETGHLVLATLHT A AVER++ Sbjct: 193 DFAEGLRAALRQAPHVIVLGEARDRDTLDAALTAAETGHLVLATLHTADCAGAVERVLAC 252 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL-- 298 F E+ RN+LAGSL+AVL+Q+L GR ELL+ T + I G+ L Sbjct: 253 FGPAEEKLARNRLAGSLKAVLAQRLLPRLGGGRAVSAELLVTTLRLRERIASGEATSLGV 312 Query: 299 PHVIQTGQQVGMITFQQS 316 +I+ G GM+ F S Sbjct: 313 ADIIEQGAPYGMVGFDAS 330 >UniRef50_C6XET7 Type II secretion system protein E n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XET7_METSD Length = 358 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 146/244 (59%), Gaps = 18/244 (7%) Query: 40 DTPDVEELLREW--------LDDDQRAILLENGQLDFAVSLAE----------NQRLRGS 81 +TP + +L W L DD ++E D+ +L + N RLR + Sbjct: 33 NTPVMAKLPTGWTEVQDFLPLTDDDVITIVEGLDSDYINTLKKRAINRPLTLTNWRLRIN 92 Query: 82 AFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMV 141 A+ I +++R +P + P+L+ LG P + LL++ GL+LV+GATGSGK+TT+AA++ Sbjct: 93 AYLALENIMMSIRRVPINPPELKTLGLPASVRLLLEAPRGLLLVSGATGSGKTTTVAAII 152 Query: 142 GYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGE 201 +N +HI+T+EDPVE++Y ++ + QREIG+ +F G R A+R+ P+VI++GE Sbjct: 153 EEINLSKQSHIVTIEDPVEFVYKRKKAVFSQREIGVDATSFYEGARDAMRQCPNVIVIGE 212 Query: 202 LRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVL 261 +RD ET AL A+E+GHLV+ TLH A V++L+ FP QE+ LA +L ++ Sbjct: 213 IRDKETADTALLASESGHLVIGTLHANSAVGTVQKLLGFFPEQERSSRAQSLAINLVGII 272 Query: 262 SQKL 265 +Q L Sbjct: 273 NQIL 276 >UniRef50_B8HI52 Type II secretion system protein E n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HI52_ARTCA Length = 409 Score = 163 bits (413), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 110/323 (34%), Positives = 181/323 (56%), Gaps = 15/323 (4%) Query: 15 VSDLHLCSAWPARWRIRGR---MEAAP---FDTPDVEELLREWLDDDQRAILLENGQLDF 68 VSD+H+ P R R+R M+ P F D+E L E D L G + Sbjct: 60 VSDMHIHPGKPVR-RVRSGNLVMDQGPDGIFTAEDIEAWLIEATDGRPNP-LEPRGHVSV 117 Query: 69 AVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGA 128 A++ +N R+RG+ G+++ RL+P+ P+ ++G P ++ +L+ ++GLI++ G Sbjct: 118 AMA-TDNYRVRGTFRKSHAGVTVTFRLIPNVIPEANEVGVPQIIQDLMHRDSGLIILEGP 176 Query: 129 TGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS-QRCLIQQREIGLHCMTFASGLR 187 TGSGK+T +AA++ +N+H + HI +EDP E+++ I QR+IG H + + + + Sbjct: 177 TGSGKTTAIAALIKMVNRHYNKHIYMVEDPTEFVHEEIGATSIIQRQIGSHALDYPTAIE 236 Query: 188 AALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKD 247 ALR P++I++GEL + T + AL AA TGHLV+ T H A+A++ + F A E+ Sbjct: 237 DALRSKPNIIVIGELLNPATAKAALHAATTGHLVITTAHAGSIAEALDSFIGQFNADEQA 296 Query: 248 PVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 VR++L+ SL A++ QKL V +GR+ A E+L+N LIR+ +H + I + Sbjct: 297 QVRSRLSQSLLAIMVQKL-VPAVDGRLQAAREVLVNNTNFSELIRKDSSHLIRAQIDGDK 355 Query: 307 QVG---MITFQQSYQHRVGEGRL 326 Q G T + S V EG++ Sbjct: 356 QAGERRSFTLEHSLFTLVAEGKI 378 >UniRef50_Q2S330 Twitching motility protein PilT n=2 Tax=Rhodothermaceae RepID=Q2S330_SALRD Length = 476 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/335 (30%), Positives = 176/335 (52%), Gaps = 23/335 (6%) Query: 2 NMEEIVALSVKHNVSDLHL----C--SAWPARWRIRGRM----EAAPFDTPDVEELLREW 51 ++ + V +++ + SD+ L C + W +R+ G E +D + + L+ Sbjct: 116 HVNQFVRRTLELDASDMDLGGRACDGNVW---YRVDGEKRREDEFGAYDPLETDILVLNL 172 Query: 52 LDDDQRAILLENGQLDFAVSLAE-------NQRLRGSAFAQRHGISLALRLLPSHCPQLE 104 L++ Q LLE G DF+ L + +R R +A++ +L +R + LE Sbjct: 173 LNEQQTQQLLEAGATDFSYRLEDVTGEDGRPRRFRATAYSDYDHAALNMRAITDEVFALE 232 Query: 105 QLGAPTVLPE---LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEY 161 LG + + +GL L+TG TGSGKSTTL A++ N+ H++ + PVEY Sbjct: 233 DLGFHEKIQQGMMFRHVRDGLTLITGVTGSGKSTTLDAIIDANNEDFPGHVVVIAQPVEY 292 Query: 162 LYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLV 221 ++ ++C+++ RE+G TF +G+ ALR+DPD++++GE+RD TI+ AL ++GH V Sbjct: 293 MHKPKQCIVRHREVGKDVATFKTGITQALRQDPDIVVIGEMRDPATIQAALEITDSGHKV 352 Query: 222 LATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLI 281 +TLHT A + ++R+V P +E+ VR++LA LR V+SQ+L GR E+L Sbjct: 353 FSTLHTSSAMETIDRIVAEVPPEEQQRVRHRLADVLRCVISQQLLPKIGGGRQMAKEVLW 412 Query: 282 NTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQS 316 + I+ ++ ++ G G T +Q Sbjct: 413 VDSSARAAIKNDNVGEVYQMMWEGGNQGQTTLEQD 447 >UniRef50_UPI0001744C3D twitching motility protein PilT n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744C3D Length = 353 Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 161/314 (51%), Gaps = 19/314 (6%) Query: 12 KHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREW--------LDDDQRAILLEN 63 +H VSDL L R++I ++ + + ++L W D D+ + L+ Sbjct: 16 QHQVSDLFLQEGELPRFKINEQLMVYGEEPLGLPQILSLWQACGADPATDMDRDSGLISQ 75 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN-GL 122 + F V+L G+ LR + + P L+ LG P L S N GL Sbjct: 76 NHVRFRVNLHRTMGRLGAV----------LRRIKTQIPSLDTLGVPVDLLTRWASRNFGL 125 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LVTG TG+GKSTT+A+++ ++NQ+ H++T+EDPVEY++ + QRE+G +F Sbjct: 126 VLVTGPTGTGKSTTIASLLQWVNQNLARHVVTIEDPVEYVFTNDMSHFTQREVGRDTGSF 185 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 A GLR A+R+ PD I +GE+RD +T AL A+ETGHLVLATLH+ + +ER ++ FP Sbjct: 186 AQGLRGAMRQAPDAIFVGEIRDFDTALTALQASETGHLVLATLHSERVSDTMERFLNLFP 245 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 + + L+ L VL QKL G L E + N A+ + I + + + + Sbjct: 246 KDQAGVGTHMLSSQLVGVLCQKLVPRTDGGLHLLVEHIENVGAIRDWISQRDSAHIQDFL 305 Query: 303 QTGQQVGMITFQQS 316 + G F S Sbjct: 306 RKGSDAMTRAFMHS 319 >UniRef50_UPI0001744D67 twitching motility protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744D67 Length = 386 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 93/238 (39%), Positives = 143/238 (60%), Gaps = 21/238 (8%) Query: 66 LDFAV---SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLG-APTV---LPELLKS 118 +DF+ +L R+R G+ L R L QLE LG P + L EL++ Sbjct: 96 IDFSCDAGALGAPVRMRVQMHLSEGGMGLTCRWLRGTISQLETLGLEPMISDSLRELMQR 155 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR----------- 167 GL L+TG TGSGKSTTLAA++ ++ ++ HI+T+EDP+EY Y++ Sbjct: 156 RFGLGLITGPTGSGKSTTLAAVLDWVRRNFPKHIVTVEDPIEYRYSATMEDPNQPGVQIP 215 Query: 168 --CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 L+ Q+E+G H ++ SGL+ LR+ P++IL+GE+RD ET+ + AA+TGH VL+TL Sbjct: 216 CPSLVTQQEVGKHTNSYQSGLKEVLRKTPNIILIGEIRDRETMETCIEAAQTGHFVLSTL 275 Query: 226 HTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINT 283 HTRGA + ++R+++ FP +++ + ++L +L VLSQ L + GRV + E L NT Sbjct: 276 HTRGAVKTIDRILEFFPKEQQPAILHRLGETLTFVLSQGL-LTGFNGRVLVTEYLQNT 332 >UniRef50_Q11ZJ5 Type II secretion system protein E n=2 Tax=Polaromonas sp. JS666 RepID=Q11ZJ5_POLSJ Length = 369 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 132/215 (61%), Gaps = 6/215 (2%) Query: 72 LAENQRLRGSAFAQRHGIS--LALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGAT 129 L + RLR +A+ G L++R P LE+ G + ++++ GLIL++G T Sbjct: 86 LVGDWRLRVTAYLAGRGNKKMLSIRRTPVVPMPLEKTGLSPSVKLMVENPKGLILLSGPT 145 Query: 130 GSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAA 189 GSGK+TT+AA++ Y+N +AH++T+EDP+EY + + QRE+G+ +F G+R A Sbjct: 146 GSGKTTTMAALIDYINTTRNAHVVTIEDPIEYEFVRNNSVFSQREVGVDTPSFFEGVRGA 205 Query: 190 LREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPV 249 +R+ PDVI++GE+RD +T A+ A E+GHLV+ATLH A AV++LV FP +E Sbjct: 206 MRQRPDVIVIGEIRDRDTAENAILAGESGHLVIATLHASSAYGAVQKLVSFFPGEELART 265 Query: 250 RNQLAGSLRAVLSQKL--EVDKQEGRVALFELLIN 282 + LA SL V+ + VDK G +A ELL N Sbjct: 266 AS-LATSLMGVVHHAIVPTVDKLTGVLA-SELLFN 298 >UniRef50_C4K520 TraJ conjugal transfer protein n=9 Tax=Gammaproteobacteria RepID=C4K520_HAMD5 Length = 389 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 111/319 (34%), Positives = 162/319 (50%), Gaps = 33/319 (10%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM-EAAPFD--------------TPDVEE 46 + A H V+D+HL P GR+ +A+ F TP+++ Sbjct: 19 TLRRFFAWCASHQVTDIHLQGGAPMIVGRYGRLIKASAFRLEEARLTQLVDEIFTPEIKA 78 Query: 47 LLREWLDDDQRAILLENGQLDFAVSLAENQRLR-------GSAFAQRHGISLALRLLPSH 99 +++ D RA+ LE G + L +RLR +A Q +++ LRL+PS Sbjct: 79 MVKSGQGVD-RALQLE-GDANGRYGLPRGERLRFRANFIQATAGRQELTMAVTLRLIPSQ 136 Query: 100 CPQLEQLGAPTVLPELLKS---ENGLILVTGATGSGKSTTLAAMVGYLNQ-HADAHILTL 155 P LE L + PEL K+ GLI V G TGSGKST LAA+ Y + + D I+T Sbjct: 137 IPTLESLA---IEPELFKNLLPHKGLIWVCGETGSGKSTLLAAIYQYCGRVYPDRKIVTF 193 Query: 156 EDPVEYLYAS--QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALT 213 EDP+EY+ + R Q +IG +F+ GLR ALR+ PDVI +GE+RD ET+ A+ Sbjct: 194 EDPIEYILGTPENRLPPTQSQIGRDVSSFSEGLRLALRQAPDVIGVGEIRDGETLMGAIA 253 Query: 214 AAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGR 273 ++GHL L+TLHT A+ + R V FP ++ V + L G L+ ++ Q+L R Sbjct: 254 CGQSGHLCLSTLHTHSPAETIPRAVWMFPPDRREAVAHDLLGILQVIVVQQLLRTTDGQR 313 Query: 274 VALFELLINTPAVGNLIRE 292 A+ E LI AV + E Sbjct: 314 QAIREYLIFDEAVRQALSE 332 >UniRef50_Q5ZS43 DotB n=16 Tax=Legionellales RepID=Q5ZS43_LEGPH Length = 387 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 128/216 (59%), Gaps = 5/216 (2%) Query: 88 GISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQH 147 I + LR +P+ P+L + P + E + + G++ +TGATGSGKST LA+++ L + Sbjct: 127 AIQITLRTIPTTPPKLSTMNLPDNIIEAIAPQEGIVFITGATGSGKSTLLASIIRELIET 186 Query: 148 ADAH--ILTLEDPVEYLY---ASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGEL 202 +D++ +LT E P+E++Y + ++ Q EI H FA G+R ALR P +I++GE Sbjct: 187 SDSNRKVLTYESPIEFVYDEIETISAVVSQSEIPRHLPNFADGVRNALRRKPRLIMVGEC 246 Query: 203 RDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLS 262 RD+ETI AL AA TGH V TLHT G A+ + RLV SF +E+ + ++R + Sbjct: 247 RDAETISAALEAALTGHPVYTTLHTSGVAETMRRLVTSFSGEERLGRTIDILETIRLCIW 306 Query: 263 QKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 QKL E RVAL E L+ V +++ EG +++ Sbjct: 307 QKLVPTVDERRVALREYLVFDEEVRDILLEGDPNEV 342 >UniRef50_A3NLN2 Twitching motility protein PilT n=37 Tax=Burkholderia RepID=A3NLN2_BURP6 Length = 368 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 104/282 (36%), Positives = 159/282 (56%), Gaps = 11/282 (3%) Query: 9 LSVKHNVSDLHLCSAWPARWRI-RGRMEAAPFDTPDVEELLREWLD--DDQRAILLENGQ 65 + +K +D+H+ P + RG +E + D P + + +R LD D+ L G Sbjct: 21 IDLKQMFTDIHIEQDRPVTIKTPRGWVETS--DEPVLLDDMRPLLDAIDEHWESALRQGT 78 Query: 66 LDFAVSLAENQRLRGSAFAQRHG--ISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLI 123 LD L RLR + G I +++R LP LE+LG P + +L + G+I Sbjct: 79 LDRPFVLTRC-RLRCHVYRAGGGRKIVISMRRLPLRPLPLEELGLPVYVRSMLDNTKGII 137 Query: 124 LVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFA 183 LVTG TGSGK+TT+A+++ ++N + HI+T+E+P+EY ++ +I QRE+ F Sbjct: 138 LVTGPTGSGKTTTIASLLEHVNATRNTHIVTIEEPIEYYLERRQSIISQREVPTDTPNFP 197 Query: 184 SGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPA 243 GLR ALR+ PDV+++GE+RD++T L A E+GHLVLAT+HT A A+ +L+ FP Sbjct: 198 HGLREALRQKPDVVMVGEVRDAQTADTLLQAGESGHLVLATMHTGSAVSALNKLLSFFPV 257 Query: 244 QEKDPVRNQLAGSLRAVLSQKLEVDKQEGR--VALFELLINT 283 +++D LA SL ++ Q L V +G V ELL N Sbjct: 258 EQRDRHAVALAESLIGIVCQSL-VPSADGESLVLASELLFNN 298 >UniRef50_A3E238 Type IV pili twitching motility protein n=1 Tax=Microcystis aeruginosa UWOCC MRA RepID=A3E238_MICAE Length = 320 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 102/328 (31%), Positives = 165/328 (50%), Gaps = 52/328 (15%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD----TP-DVEELLREWLDDDQR 57 +E+++ V+ SD+H+ S P +RI G++ P + TP D ++L+ L++ Q Sbjct: 5 IEDLMEQLVEMGGSDMHIQSRAPVYFRISGKL--IPINEKSLTPQDCQKLIFSMLNNTQI 62 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L +N +LD + + R R + + +R + LR L S P EQL P V+ EL + Sbjct: 63 KELEQNWELDCSYGVKGLARFRINVYKERGAYAACLRALSSKMPNFEQLNLPEVIRELSE 122 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GLILVTG TGSGK+TTLAA++ +N+ + I LEDP+EY++ + + L + Sbjct: 123 RPRGLILVTGQTGSGKTTTLAAILDLINR-TRSEIFLLEDPIEYVFPNIKSLFHHDKKEK 181 Query: 178 HCMTFASGLRAALR-EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ R++ + PD+IL+GE+R+ +TI LA+ + + Sbjct: 182 IPKSFATAFRSSFYGKIPDIILVGEMREFKTIALAVFS--------------------QN 221 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 LV +EK+P GR + E+++ TP + NL REGK Sbjct: 222 LV-----KEKNPKPGVF------------------GRAMVQEIMVVTPTIANLNREGKAP 258 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEG 324 Q+ IQTG ++GM +Q + V G Sbjct: 259 QVYLAIQTGMKLGMQNMEQGLANLVVSG 286 >UniRef50_C7SA62 TraJ protein n=11 Tax=root RepID=C7SA62_ECOLX Length = 382 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 103/332 (31%), Positives = 168/332 (50%), Gaps = 31/332 (9%) Query: 13 HNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLD-- 67 H VSD+ L P +R+ R R +A T + L+ E + +L +D Sbjct: 30 HKVSDVDLTGGSPVSVSRFGRRVRCSSATLPTTLMSSLIDELFGREVIPRVLAGNPVDRT 89 Query: 68 ----------FAVSLAENQRLR-----GSAFAQRHGISLALRLLPSHCPQLEQLGAPTVL 112 + + E RLR G++ A+ IS+ +R++P+ P + + L Sbjct: 90 IQINGDASGRYGLKRGERIRLRSHLIQGTSGAEEKAISITMRVIPTEIPDILSMNIEPDL 149 Query: 113 PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQ-HADAHILTLEDPVEYLYASQRCLI- 170 E + ++GL V G TGSGKST AA+ Y+ + + +A I+T EDPVEY+ ++ L+ Sbjct: 150 LEAMVCKSGLGFVCGETGSGKSTLCAALYCYIKKNYPNAKIVTYEDPVEYILGNENDLLP 209 Query: 171 -QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 Q EIG ++FA+GLR+A+R +P++I +GE+RD+ET A+ A TGH L+T+HT+ Sbjct: 210 PHQAEIGRDVVSFAAGLRSAVRRNPEIIGVGEIRDNETADAAVQAGNTGHYCLSTMHTKS 269 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFE-LLINTPAVGN 288 + + RL+ FP +D + + L+ +L Q L GR A+ E ++IN N Sbjct: 270 PGETLARLLGLFPPVIRDSMAWAVLSLLQFILVQVLVRTNDGGRKAVREYIVINDELRDN 329 Query: 289 LIREGKTHQLPHVIQTGQQVGMITFQQSYQHR 320 L +PH + G + I Q+ + R Sbjct: 330 L------SGMPHA-EWGHHIDAIIRQEKRRIR 354 >UniRef50_C4XH26 General secretion pathway protein E n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH26_DESMR Length = 600 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 101/253 (39%), Positives = 146/253 (57%), Gaps = 23/253 (9%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEE----------LLREWL 52 + +++A +V+ SD+H+ + +IR R++ +D +++ +R L Sbjct: 222 VNQLLAQAVRDLCSDIHI-EPYQNSLKIRFRLDGVLYDIKTLDKRWHPPVVSHVKIRSKL 280 Query: 53 DDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLG-AP 109 D +R L ++G D + N +R S F + G L LRLL S L +LG +P Sbjct: 281 DIAERR-LPQDGSFDIRLG-NRNVDIRVSVFPTKFGERLVLRLLEKNSRILSLGELGLSP 338 Query: 110 TVLPEL---LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 EL + +G+ILVTG TGSGKSTTL A++ ++N D +ILT+EDPVEY Sbjct: 339 GHFEELSALARLPHGIILVTGPTGSGKSTTLYALINHINS-TDKNILTIEDPVEYQIEGV 397 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + +I L TFA GLR+ LR+DPDVIL+GE+RD+ET ++A AA TGHLV +TLH Sbjct: 398 GQMQVNAKIDL---TFAGGLRSILRQDPDVILVGEIRDTETAQIACQAALTGHLVFSTLH 454 Query: 227 TRGAAQAVERLVD 239 T AA AV R+VD Sbjct: 455 TNDAASAVTRMVD 467 >UniRef50_B4U8F8 Type II secretion system protein E n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U8F8_HYDS0 Length = 354 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 12/308 (3%) Query: 16 SDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQ-RAILLENGQLDFAV 70 +D L + + R+ I + P T DV E++ D+ R I+ E +++ Sbjct: 26 TDFQLIANYIPRYGIAKKYAVIPGMHRLTTDDVVEIIELTSDEKNWRDIMAEYSTFEYSF 85 Query: 71 SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK-SENGLILVTGAT 129 ++ R S G+ +A+R+L P +E + P + + +K + +G I+ TG T Sbjct: 86 AIKNYGLYRVSVAESLEGLGMAIRILSYELPSIEMVRLPKEVVDFMKDARSGAIIHTGGT 145 Query: 130 GSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAA 189 SGKST++AA +G+L+ + +LT E+PVEY + ++ ++Q I F L+ A Sbjct: 146 TSGKSTSIAAEIGFLSDIHNVVVLTFENPVEYRFLYRKATVRQFNIPTQVKNFQHALKIA 205 Query: 190 LREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPV 249 LR DP +IL GE+R + I L A GHLV +TLHT+ + A L++ F ++E + Sbjct: 206 LRSDPSIILFGEVRSEDEIISLLDMAARGHLVFSTLHTKSVS-ATFSLLNQFGSKE---L 261 Query: 250 RNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 + + A++SQ L K + + ++++L+ + +I +G + + + Q G+ G Sbjct: 262 LGLFSSQIVAIISQFLYRSKAKKFLPIYDILVPNKPIRTMIADGNFNDIERIRQEGKIQG 321 Query: 310 --MITFQQ 315 ITF Q Sbjct: 322 GFSITFTQ 329 >UniRef50_A8ZWZ6 General secretory pathway protein E n=2 Tax=Deltaproteobacteria RepID=A8ZWZ6_DESOH Length = 570 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 120/381 (31%), Positives = 190/381 (49%), Gaps = 74/381 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAI--- 59 + IVA SVK SD+H+ A+ ++IR R++ +D + ++ L + + Sbjct: 192 VNHIVAQSVKAEASDIHI-EAYQDTFKIRYRVDGILYDFLSPPKRIQPALVSRIKVMAKM 250 Query: 60 ------LLENGQLDFAVSLAENQ-RLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAP- 109 L ++G++ V L + + +R S+ G L LRLL S L+++G Sbjct: 251 NIAEKRLPQDGRMQ--VRLGDKEVDIRVSSIPITAGERLVLRLLNKASSMLGLQEIGFSR 308 Query: 110 ---TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 + L++ NG+ILVTG TGSGK+TTL A + +N D +I+T+EDPVEY + Sbjct: 309 QTFDLFSRLIRYSNGIILVTGPTGSGKTTTLYAALSTINT-PDINIITIEDPVEYQVSGI 367 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + ++IGL TFA GLR+ +R+DPDVIL+GE+RD ET +A+ +A TGHLV +TLH Sbjct: 368 NQIQVNQKIGL---TFARGLRSIVRQDPDVILIGEIRDQETADIAVQSALTGHLVFSTLH 424 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL--------------------- 265 T +A AV RLVD +P L+ S+ AV++Q+L Sbjct: 425 TNDSASAVTRLVDI----GVEPF--LLSSSVIAVIAQRLVRVLCPRCKEAYVPDDSAILS 478 Query: 266 -----------EVDKQ-----------EGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 + ++ GR+A+FE+L+ + ++ TH + Sbjct: 479 IGASVELFAGKTIYRKTGCDHCLGTGYSGRIAIFEILVMDEKIKKMVL--TTHDSGRIEA 536 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 + GMIT +Q H+V +G Sbjct: 537 AAVKHGMITLRQDGIHKVLDG 557 >UniRef50_A7GEM1 General secretion pathway protein E n=10 Tax=Clostridium RepID=A7GEM1_CLOBL Length = 509 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 127/200 (63%), Gaps = 20/200 (10%) Query: 74 ENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA----PTVLPELLKSENGLILVTG 127 EN R S +G L +R+L + L+ LG + ++LK NGLIL+TG Sbjct: 219 ENNDFRVSTLPTVYGEKLVIRILYKNEKIADLKSLGFLKEDRKNIEKMLKKPNGLILITG 278 Query: 128 ATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY--ASQRCLIQQREIGLHCMTFASG 185 TGSGKSTTL +M+ Y+N + + +I+T+E+PVEY +Q + +RE +TF G Sbjct: 279 PTGSGKSTTLYSMLQYIN-NKEKNIITIEEPVEYTINGINQVNVDYKRE-----LTFLKG 332 Query: 186 LRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQE 245 L++ LR+DPD+I++GE+RD ET ++A+ A+ TGHLVL+TLHT GA +++ RL+D + Sbjct: 333 LKSILRQDPDIIMVGEIRDEETAKVAVRASITGHLVLSTLHTNGALESIIRLLD----MK 388 Query: 246 KDPVRNQLAGSLRAVLSQKL 265 +P L+ +LR ++SQ+L Sbjct: 389 IEPY--ILSDALRGIISQRL 406 >UniRef50_A3EUR7 Putative defect in organelle trafficking protein (DotB) n=1 Tax=Leptospirillum rubarum RepID=A3EUR7_9BACT Length = 371 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/286 (33%), Positives = 147/286 (51%), Gaps = 19/286 (6%) Query: 14 NVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAILLENGQ---LD 67 N SDL L S P R +RGR E T ++ ++L +D + ++ GQ Sbjct: 30 NASDLLLTSESPVRAYLRGRWETVGTRALKTHELADVLNA-IDMGNSSSMVAAGQARNFA 88 Query: 68 FAVSLA-ENQRLR---GSAFAQRHG---ISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 + VSL + RLR ++ +R G I + R +P P L+ + P L E L + Sbjct: 89 YEVSLGGRDSRLRFRVNASGVRRSGSRDIKIVCRAIPDIPPTLDSMNLPPALQEALFPLD 148 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY----ASQRCLIQQREIG 176 GL+ V G TGSGK+T LAAM+ + HI T E P+E++Y + +I Q EI Sbjct: 149 GLVGVAGVTGSGKTTLLAAMLREKLERGGCHIATAEAPIEFVYDKVETRKTGIICQSEIP 208 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 H +F + LR+ PD IL+GE RD ETI + A +TGH T+HT G + + R Sbjct: 209 THHPSFGKAVEEMLRQKPDAILVGESRDVETIANTVLACQTGHTAYTTVHTNGVGETIGR 268 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLI 281 + ++FP E+D V +L ++R ++ Q+ L GR+A+ E L+ Sbjct: 269 MAEAFPGPERDAVAMKLLAAMRVLIHQRLLRKADGSGRIAVREWLV 314 >UniRef50_Q7BQX3 TraJ n=1 Tax=Serratia entomophila RepID=Q7BQX3_9ENTR Length = 385 Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/303 (33%), Positives = 148/303 (48%), Gaps = 23/303 (7%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFD------------TPDVEE 46 + E +HNVSD+HL S P GR A P + TPD++ Sbjct: 17 KLREFFVHCYRHNVSDIHLQSGSPIVVDHHGRKVVASQFPLEHANLVRLIDEVYTPDIKS 76 Query: 47 LLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAF-----AQRHGISLALRLLPSHCP 101 L++ D+ L + F + E R R + A I++ LR++PS+ P Sbjct: 77 LVQGGQGADRPLQLEGDNNGRFGLKRGERVRFRTNFIQATIGALNTAIAMTLRIIPSNIP 136 Query: 102 QLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMV-GYLNQHADAHILTLEDPVE 160 LE++G L +G+ LV G TGSGKST LA++ Y + + ++T EDPVE Sbjct: 137 ILEEMGIEKDLYRSFLPMDGMGLVCGPTGSGKSTLLASVYQHYGETNPNGKLVTYEDPVE 196 Query: 161 YLYASQRCLI--QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG 218 YL S R L+ QQ EIG +FA GLR ALR P +I +GE+RD ET++ A+ A++G Sbjct: 197 YLLNSPRLLLRPQQSEIGRDVPSFAHGLRLALRRAPHIIGIGEIRDLETLQAAVACAQSG 256 Query: 219 HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFE 278 HL L TLH A R V P ++ + L ++R V+ Q L R A+ E Sbjct: 257 HLTLGTLHAFSPGHAFSRCVLMAPNDSREQIAFDLLDAMRFVVVQHLLPTTDGKRQAVRE 316 Query: 279 LLI 281 ++ Sbjct: 317 YVL 319 >UniRef50_Q1YQV4 Putative general secretion pathway protein E n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQV4_9GAMM Length = 492 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 107/283 (37%), Positives = 154/283 (54%), Gaps = 37/283 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELL------REWLD 53 + ++A S+K N SD+H+ R+R+ G + + + LL LD Sbjct: 119 LNAVIAESLKENASDIHIEPYEKEALVRFRLDGVLRTVLTPSIQIAPLLISRIKVMSKLD 178 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAP-- 109 +R L ++G++ + + LR S HG + +RLL +L + LG P Sbjct: 179 IAERR-LPQDGRMGVRLG-GRSIDLRVSTMPSSHGERVVMRLLDKDAGKLKTDDLGMPQD 236 Query: 110 --TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 L +L+ +G+ILVTG TGSGK+TTL A + +++ +I+T+EDPVEY Sbjct: 237 TKAELVDLVSRPHGIILVTGPTGSGKTTTLYAALQQMDRQ-QRNIMTVEDPVEYDLPG-- 293 Query: 168 CLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 I Q +I L MTFA GLRA LR+DPDVIL+GE+RD ET +A A+ TGHLVL+TLH Sbjct: 294 --ISQTQINLRAGMTFARGLRAILRQDPDVILIGEIRDGETAEIATQASLTGHLVLSTLH 351 Query: 227 TRGAAQAVERL----VDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 T AA A+ RL VDSF LA ++R ++SQ+L Sbjct: 352 TNTAAGAITRLQDLGVDSF----------LLASTVRGIVSQRL 384 >UniRef50_Q21PW7 Type II secretion system protein E n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21PW7_RHOFD Length = 408 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 109/194 (56%), Gaps = 11/194 (5%) Query: 64 GQLDFAVSLAENQRLRGSAF---AQRHGIS--------LALRLLPSHCPQLEQLGAPTVL 112 G +D + + + R R + F ++ ++ +R++P P L LG P + Sbjct: 94 GGIDGPIRMGPSARYRANIFLWGGEQSDVADGLPGLLGCVIRVIPEEVPDLTTLGLPGPM 153 Query: 113 PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQ 172 L + GL+LV G TGSGK+TT+ + +LN H H++T+EDP+EY+ ++C I Sbjct: 154 TVLADANYGLLLVVGPTGSGKTTTMTSYFDHLNNHRVGHLVTVEDPIEYVLKEKKCRITP 213 Query: 173 REIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQ 232 RE+G + ++ A G+R A+RE P I++GE+RD+ET+ AA +GH V+AT H Sbjct: 214 REVGTNVISIAVGVRDAMREIPLAIMVGEVRDTETLVETFRAARSGHYVVATKHAPNLVA 273 Query: 233 AVERLVDSFPAQEK 246 A+ LVD P + + Sbjct: 274 AIRSLVDDLPGEPR 287 >UniRef50_A7HJC2 Type II secretion system protein E n=11 Tax=Thermotogaceae RepID=A7HJC2_FERNB Length = 569 Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 85/180 (47%), Positives = 114/180 (63%), Gaps = 13/180 (7%) Query: 68 FAVSLAENQ-RLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTV----LPELLKSEN 120 F + E Q LR S HG + +R+L S +LE LG + +L++ Sbjct: 260 FFIKKDEEQFDLRVSTMPSVHGEKVVMRILKVSSSKKKLEDLGYSPYNYERIKKLIEHPY 319 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEY-LYASQRCLIQQREIGLHC 179 G+ILVTG TGSGKSTTL A++ LN D +I+T EDPVEY + +C + EIGL Sbjct: 320 GIILVTGPTGSGKSTTLVAVINSLNSE-DVNIVTAEDPVEYTVDGITQCQVNA-EIGL-- 375 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 TFA LRA LR+DPD+I++GE+RD ET +LA+ A+ TGHLVL+TLHT AA A++RLV+ Sbjct: 376 -TFAKYLRAFLRQDPDIIMVGEIRDKETAQLAVEASLTGHLVLSTLHTNTAAGAIDRLVN 434 >UniRef50_A8ZYV7 Type II secretion system protein E n=11 Tax=Deltaproteobacteria RepID=A8ZYV7_DESOH Length = 577 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 27/252 (10%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQ 65 ++A +V+ SD+H+ S ++R R++ + P + L +L R +L N Sbjct: 203 LLAQAVRQGASDIHI-SPEKRYVQVRLRVDGVLHEVPAPPKTL--FLSIVSRLKILAN-- 257 Query: 66 LDFAVS----------LAENQ--RLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV 111 LD +VS EN+ +R S +G ++ LRLL + L+QLG + Sbjct: 258 LDISVSRIPQDGRFTVKIENKEINIRVSTIPTIYGENVVLRLLDTSGGVYTLDQLGMASE 317 Query: 112 LPELLKSE----NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 E LK G+IL TG TGSGKST+L AM+ +N+ D +I+TLEDPVEY R Sbjct: 318 DQEKLKRNIQKPYGMILATGPTGSGKSTSLFAMINRINK-PDINIITLEDPVEYRIEKIR 376 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 R G MTFASGLR+ LR+DPDVI++GE+RD ET ++A AA TGH+V +T+HT Sbjct: 377 QAQLNRRAG---MTFASGLRSILRQDPDVIMVGEIRDGETAQVATQAALTGHMVFSTVHT 433 Query: 228 RGAAQAVERLVD 239 AA A+ R +D Sbjct: 434 NDAAGAITRFID 445 >UniRef50_A2SNL4 Pili biogenesis ATPase n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SNL4_METPP Length = 583 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/152 (53%), Positives = 102/152 (67%), Gaps = 12/152 (7%) Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 EL+ GL+LV G TGSGK+TTL ++G LN + +I+TLE PVEY+ I Q Sbjct: 180 ELIDEPQGLLLVVGPTGSGKTTTLYGLIGALN-NGRRNIITLEHPVEYVIPG----ISQV 234 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 I H ++FA GLRAALR+DPDVIL+GE+RD ET +A+ AA TGHLVLATLH AA A Sbjct: 235 NID-HHLSFADGLRAALRQDPDVILVGEIRDQETATIAVQAANTGHLVLATLHANSAALA 293 Query: 234 VERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 + RLVD DP + LA SLR V++Q+L Sbjct: 294 ITRLVD----MGVDP--HSLAASLRGVMAQRL 319 >UniRef50_Q68JB4 TraJ n=6 Tax=Escherichia coli RepID=Q68JB4_ECOLX Length = 382 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 94/302 (31%), Positives = 149/302 (49%), Gaps = 25/302 (8%) Query: 6 IVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLE 62 A +H VSD+ L P +R+ R R A P + + L E + +L Sbjct: 23 FFAWCARHRVSDIDLTGGSPVSVSRFGRRVRSSAHPLPSSIMMALSDELFGREVLPRVLS 82 Query: 63 NGQLDFAV----------SLAENQRLR-------GSAFAQRHGISLALRLLPSHCPQLEQ 105 +D + L QR+R G++ + IS+ +R++PS P + Sbjct: 83 GHPVDRTIQVSGDASGRYGLQRGQRVRLRCHLIQGTSATEEKVISVTMRVIPSDIPDILT 142 Query: 106 LGA-PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQH-ADAHILTLEDPVEYLY 163 + P +L +L+ + GL + G TGSGKST AA+ Y+ H D +T EDPVEY+ Sbjct: 143 MNIEPDLLDAMLR-KTGLGFICGETGSGKSTLAAALYRYIQTHFPDRKTVTYEDPVEYIL 201 Query: 164 ASQRCLI--QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLV 221 + L+ Q EIG +FA+GLR+A+R +PD+I +GE+RD ET A+ A TGH Sbjct: 202 GGENDLLPPHQAEIGRDVESFAAGLRSAVRRNPDIIGIGEIRDYETADAAVQAGNTGHFC 261 Query: 222 LATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLI 281 + T+HT+ + RL+ FP + +D + + ++ +L Q L GR A+ E ++ Sbjct: 262 IGTMHTKSPGETFARLLGLFPPEIRDSMAAAILSLVQFILVQVLVRTNDGGRQAVREYIV 321 Query: 282 NT 283 T Sbjct: 322 IT 323 >UniRef50_A6Q683 Type II secretion system protein E n=3 Tax=Epsilonproteobacteria RepID=A6Q683_SULNB Length = 503 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 157/273 (57%), Gaps = 31/273 (11%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAI---------L 60 ++K SD+H+ S + +R R++ A D+E+ + + + + I + Sbjct: 134 AIKKGASDIHIESG-ERKGEVRLRIDGALKKHLDLEKSIINLVINRIKVISSLDISEKRV 192 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTVLPE---- 114 ++G+ ++S + +R S +G + +R+L H P L++LG L E Sbjct: 193 PQDGRTQISIS-GKTLDVRVSVLPTYYGERVVMRILMQSEHIPSLQELGFAEDLTEDLYK 251 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ-QR 173 LL +G+ILVTG TGSGKSTTL A + ++ D +I+T+EDPVEY AS IQ Sbjct: 252 LLNHAHGMILVTGPTGSGKSTTLHAFLQHIAT-PDKNIITVEDPVEY-NASNISQIQVNT 309 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 ++GL TFA+GLR+ LR+DPD+I++GE+RDSET +AL +A TGHL+L+TLHT + + Sbjct: 310 KVGL---TFAAGLRSILRQDPDIIMVGEIRDSETADIALRSALTGHLLLSTLHTNDSTSS 366 Query: 234 VERLVDSFPAQEKDPVRNQL-AGSLRAVLSQKL 265 + RL+D + N L + +L VL+Q+L Sbjct: 367 LSRLMDM-------GIENFLISATLLGVLAQRL 392 >UniRef50_Q181B0 Type IV pilus assembly protein n=5 Tax=Clostridium difficile RepID=Q181B0_CLOD6 Length = 561 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 111/385 (28%), Positives = 179/385 (46%), Gaps = 88/385 (22%) Query: 6 IVALSVKHNVSDLHLCSA---WPARWRIRG------RMEAAPFDT--------PDVEELL 48 I+ +V+ SD+H+ + R+RI G RM +AP+ D+ Sbjct: 186 ILENAVRMEASDIHIEQSENYMRVRFRIDGMLREYMRMNSAPYKAVISRIKIMSDINISE 245 Query: 49 REWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQL 106 + D + + ++N +DF VS R +A+R+L + E L Sbjct: 246 KRIPQDGRIYLKVDNKPIDFRVSTMPTNRDE----------KIAMRVLDKSNFMVSKEVL 295 Query: 107 G----APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYL 162 G + EL+ + GLILV G TGSGK+TTL +M+ LN + ++LT+EDP+EY Sbjct: 296 GIDEHGSKIYDELINTPYGLILVVGPTGSGKTTTLYSMLNQLNTE-NRNLLTIEDPIEYE 354 Query: 163 YASQRCLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLV 221 + Q +I +TFASGLRA +R+DPD+I++GE+RD+ET +A+ A+ TGHLV Sbjct: 355 LPG----VNQSQINEKAGLTFASGLRAFMRQDPDIIMVGEIRDTETAEIAIRASLTGHLV 410 Query: 222 LATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLE--------------- 266 L+TLH A A+ RL+D D + S+ V+SQ+L Sbjct: 411 LSTLHANTAVGAISRLLDM------DVESFLITSSVLGVISQRLTRKICEHCKVSYEADI 464 Query: 267 -------VDKQE-------------------GRVALFELLINTPAVGNLIREGKTHQLPH 300 +D E GR+ +FE+L TP + LI + Sbjct: 465 GEKKALGIDVNESVTIYRGKGCERCNNTGYKGRLGIFEMLEITPEIKELIDSSANQR--E 522 Query: 301 VIQTGQQVGMITFQQSYQHRVGEGR 325 +++ ++ GM++ ++ +V G+ Sbjct: 523 ILKMARKQGMVSLKEDIVKKVLNGK 547 >UniRef50_A8FXR0 General secretion pathway protein E n=2 Tax=Alteromonadales RepID=A8FXR0_SHESH Length = 550 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/254 (35%), Positives = 144/254 (56%), Gaps = 25/254 (9%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILL- 61 + ++ ++K SD+HL + ++RIR R++ D + +R L R +L Sbjct: 170 LNSLIGRALKAGASDMHL-EPYQEKYRIRFRIDGVLQDIEMLPAKMR--LPIASRLKILS 226 Query: 62 ----------ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAP 109 ++G+++ ++ +E +R SA G S+ +R L + ++ LG Sbjct: 227 GMDIAEKRKPQDGKIEMKIA-SEEFDIRVSALPLNDGESIVMRFLRKEAIKYDMDVLGLS 285 Query: 110 TVLPEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 + EL LK+ G+IL+TG TGSGK+T+L + +N ++D I+TLEDPVEY Sbjct: 286 GDIRELIEEDLKTTAGVILLTGPTGSGKTTSLYTFLNSIN-NSDVKIITLEDPVEYQLEG 344 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 + Q EIG F++GLR+ +R+DPDVI+LGE+RDSET ++A+ +A TGHLV +T+ Sbjct: 345 VNQVQVQSEIGFD---FSAGLRSIVRQDPDVIMLGEIRDSETAQIAMQSALTGHLVFSTV 401 Query: 226 HTRGAAQAVERLVD 239 HT AA A RL+D Sbjct: 402 HTNDAASAYTRLID 415 >UniRef50_A6DJN8 General secretory pathway protein E n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJN8_9BACT Length = 517 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 150/290 (51%), Gaps = 41/290 (14%) Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTVLPEL---- 115 ++G+++ ++S + +R + +G S+ +RLL + LE +G VL + Sbjct: 228 QDGRIELSIS-GKAIDVRMNTLPGMYGESIVMRLLQKNLQDFTLESIGMSAVLKDKFIAK 286 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 +K GL+LV G TGSGK+TTL + LN + I+T+EDP+EY + ++ I Sbjct: 287 IKKPYGLVLVVGPTGSGKTTTLYCALNILNS-GNEKIITIEDPIEYQINGITQVQVKKSI 345 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 GL +FA GLR+ +R+DPD+IL+GE+RD ET +++ AA TGHLVL+TLHT AA A+ Sbjct: 346 GL---SFADGLRSIVRQDPDIILVGEIRDKETAEISINAALTGHLVLSTLHTNDAAGAIS 402 Query: 236 RLVDSFPAQEKDPVRNQL-AGSLRAVLSQKL--------------------EVDKQEGRV 274 RL D V N L A SL AVLSQ+L +GRV Sbjct: 403 RLQDM-------GVENFLIASSLVAVLSQRLLRRVCSACGGKEENFPCRKCANTGYKGRV 455 Query: 275 ALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 ++E L + N + E K + I Q GM T ++ +V G Sbjct: 456 GVYEFLEVNQRIQNAVMEQKDSGQINAIAVSQ--GMQTIAENANEKVEAG 503 >UniRef50_A4JW54 Plasmid transfer ATPase TraJ n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JW54_BURVG Length = 387 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 110/196 (56%), Gaps = 4/196 (2%) Query: 90 SLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQH-A 148 ++ +RL+P P + ++G L E GL+LV G TGSGK+T +A+ GY H Sbjct: 125 AVTMRLIPFDLPDITKMGIEQELFEAFYPGMGLVLVCGPTGSGKTTLQSAVYGYAGIHMP 184 Query: 149 DAHILTLEDPVEYLYASQRCL---IQQREIGLHCMTFASGLRAALREDPDVILLGELRDS 205 D ++T EDP+E++ Q +IG +FA+GLR A+R P +I +GE+RD Sbjct: 185 DRKVITYEDPIEFVLGGPHWKGPQPHQAQIGRDIESFATGLRNAMRRKPSIIGIGEMRDL 244 Query: 206 ETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 ETI A+ A TGHL T+HT A+ + R + +P Q++ V ++L G LR ++ Q+L Sbjct: 245 ETIDAAIEAGLTGHLTYGTMHTESCAETINRAIQVYPPQQQSAVASRLLGCLRVIVVQRL 304 Query: 266 EVDKQEGRVALFELLI 281 RVA+ E +I Sbjct: 305 LKTTDGKRVAVREFVI 320 >UniRef50_B8CZA0 Type II secretion system protein E n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZA0_HALOH Length = 514 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/277 (36%), Positives = 154/277 (55%), Gaps = 31/277 (11%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE-----------ELLREWLDD 54 I+ ++K SD+H+ + + R+R R++ ++ P +++ E Sbjct: 144 IITTALKKGASDIHI-EPFEDKLRLRYRIDGVLYENPAPPLELLPAIITRIKIMSELNIA 202 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTVL 112 ++R L + G++ VS E +R S HG + LRLL + ++ LG + Sbjct: 203 ERR--LPQEGRIRIRVSGRE-LDIRVSIIPALHGEGVVLRLLDKAARLLDIKNLGFSEAM 259 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+ +G+ILVTG TGSGK+TTL A + YLN + I+T+EDPVEY Sbjct: 260 LKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSS-RKIITIEDPVEYQLEGINQ 318 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + EI FASGLR+ LR DPD+I++GE+RD ET ++A+ AA TGHLVLATLHT Sbjct: 319 IQVKPEINFD---FASGLRSILRHDPDIIMIGEIRDVETAKIAIQAALTGHLVLATLHTN 375 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 AA AV RL++ +D + LA +L+ +L+Q+L Sbjct: 376 DAAGAVSRLLN---MGVEDYL---LAATLKGILAQRL 406 >UniRef50_A9F277 General secretion pathway protein E n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F277_SORC5 Length = 394 Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/253 (39%), Positives = 143/253 (56%), Gaps = 23/253 (9%) Query: 3 MEEIVALSVKHNVSDLHL---CSAWPARWRIRGRM--------EAAPFDTPDVEELLREW 51 ++ +V +V SD+H+ R+R+ G M E AP T V+ L R Sbjct: 19 LDHLVRRAVSMGASDIHVEPKRDGIRVRYRVDGVMVAQGQIPIEIAPSLTSRVKVLAR-- 76 Query: 52 LDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH-CPQLEQLG-AP 109 +D +R L ++GQ + LR S F HG +L LR+L SH L++LG A Sbjct: 77 MDMTERR-LPQDGQFSLELHGHPLIHLRASTFPAIHGETLVLRVLLSHQLIPLDKLGLAE 135 Query: 110 TVLPELLK---SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 LP L + +GLI+V G TGSGK++TL +++ + ++ I+TLEDP+E +A Sbjct: 136 GDLPRLERLADRPSGLIVVCGPTGSGKTSTLYSLIKVMKT-SELSIVTLEDPIEVEFAD- 193 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + Q + TFA+GLRA LR+DPDVI++GE+RD ET ++AL A+ TGHLVL+TLH Sbjct: 194 --ITQGQTNPRQGFTFATGLRAILRQDPDVIMVGEMRDPETAQIALQASLTGHLVLSTLH 251 Query: 227 TRGAAQAVERLVD 239 T A V RLVD Sbjct: 252 TSDAVDTVARLVD 264 >UniRef50_B2ULL9 Type II secretion system protein E n=2 Tax=Verrucomicrobiaceae RepID=B2ULL9_AKKM8 Length = 546 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/194 (41%), Positives = 117/194 (60%), Gaps = 16/194 (8%) Query: 78 LRGSAFAQRHGISLALRLLPSHC-----PQLEQLGAP-TVLPELLKSENGLILVTGATGS 131 LR S+ HG S+ +R+L PQL V L+ +G+ILVTG TGS Sbjct: 247 LRVSSVPSNHGESIVMRILDKSALVLGLPQLGFFSDDEAVFDRLITLPDGIILVTGPTGS 306 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTL A + ++N+ D I+T+EDPVEY + ++ + +IG MTFA+ LRA LR Sbjct: 307 GKTTTLYACLNHINR-PDKKIITVEDPVEYELSGINQVMVKADIG---MTFAAALRAMLR 362 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 + P++I++GE+RD ET +A+ A+ TGHLV +TLHT A AV RL D R Sbjct: 363 QAPNIIMIGEIRDMETASIAINASLTGHLVFSTLHTNDAPSAVARLADIGIK------RF 416 Query: 252 QLAGSLRAVLSQKL 265 +A S+RA+++Q+L Sbjct: 417 LIASSVRAIMAQRL 430 >UniRef50_B8D2C7 Tfp pilus assembly protein PilB n=5 Tax=Firmicutes RepID=B8D2C7_HALOH Length = 558 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 11/184 (5%) Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV----LPEL 115 ++G+++ VS + +R S +G + +RLL Q+EQLG +L Sbjct: 253 QDGRIELNVSGVKID-MRVSTLPTVYGEKVVIRLLNKEEKLLQIEQLGFSETNLSRFMKL 311 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 +K +G+ILVTG TGSGKSTTL A + LN + +I+T+EDPVEY + + Sbjct: 312 IKQPHGIILVTGPTGSGKSTTLFAALNKLNT-PEKNIITVEDPVEYQLRGINQVQANSRV 370 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 GL TFAS LR+ LR+DPD++++GE+RD ET R+A+ AA TGHLVL+TLHT A +V Sbjct: 371 GL---TFASALRSILRQDPDIVMVGEIRDEETARIAVRAALTGHLVLSTLHTNDAVSSVT 427 Query: 236 RLVD 239 RL+D Sbjct: 428 RLID 431 >UniRef50_B2A563 Type II secretion system protein E n=5 Tax=cellular organisms RepID=B2A563_NATTJ Length = 561 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 147/278 (52%), Gaps = 27/278 (9%) Query: 3 MEEIVALSVKHNVSDLHL---CSAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ L++ SD+H S R+R+ G M +ELL + D Sbjct: 174 IDTVIKLAIDQEASDIHFEPTSSDMLVRFRVDGMMRQITCFPKHTQELLISRIKIMTNMD 233 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++G+ +F S +N LR SA G + +RLL L++LG Sbjct: 234 ITVKRLPQDGRCEFT-SQEQNIDLRASALPTIFGEKIVIRLLYKEKIIFPLDKLGFKDKE 292 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +L +G+ILVTG TG GK+TTL + + ++N + +I+T+EDPVEY Sbjct: 293 LSQYKAMLADSSGMILVTGPTGCGKTTTLYSSLSWINS-PEKNIITVEDPVEYQLPGVNQ 351 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA GLR+ LR+DPD+I++GE+RD ET R+A+ ++ TGHLV +TLHT Sbjct: 352 VEMNEKAGL---TFAIGLRSILRQDPDIIMIGEIRDLETARIAVRSSLTGHLVFSTLHTS 408 Query: 229 GAAQAVERLVD-SFPAQEKDPVRNQLAGSLRAVLSQKL 265 + A+ RL+D P L S++ +LSQ+L Sbjct: 409 NSIGALSRLIDMGIPMY-------LLNSSIKGILSQRL 439 >UniRef50_Q3SKS0 Pilus assembly pathway ATPase PilB n=3 Tax=Proteobacteria RepID=Q3SKS0_THIDA Length = 577 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 91/206 (44%), Positives = 122/206 (59%), Gaps = 19/206 (9%) Query: 68 FAVSL-AENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTVLPE----LLKSEN 120 FAV + +R S ++G S+ +RLL + P L+ LG P + E +L N Sbjct: 268 FAVKVRGRTVDVRLSTMPTQYGESVVMRLLSQGDNAPTLDTLGMPPAMLERFRAILHRPN 327 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GL+LVTG TGSGK+TTL A +G LN I+T+EDPVEY + +I L Sbjct: 328 GLVLVTGPTGSGKTTTLYAALGELNDPG-TKIITVEDPVEYRLPGVNQVQANDKIDL--- 383 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD- 239 +FA LRA LR+DPDVIL+GE+RD ET ++AL AA TGHLVL+TLHT AA RL+D Sbjct: 384 SFARVLRAMLRQDPDVILVGEMRDPETAQIALRAAMTGHLVLSTLHTNDAASTPVRLLDM 443 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKL 265 P+ +A S++ VL+Q+L Sbjct: 444 GVPS-------FMVATSVQGVLAQRL 462 >UniRef50_Q82V45 Bacterial type II secretion system protein E n=1 Tax=Nitrosomonas europaea RepID=Q82V45_NITEU Length = 576 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 41/249 (16%) Query: 16 SDLHL---CSAWPARWRIRGRMEAAPFDTPDVEELLREW-------------LDDDQRAI 59 SD+HL + R+RI G ++ +V+ L W LD +R Sbjct: 207 SDVHLEPMTDSLVVRYRIDGVLQ-------EVDVLSNRWSRSVVSRLKLMARLDIAERR- 258 Query: 60 LLENGQLDF---AVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLG-APTVLP 113 L ++G++ F VSL LR + F HG S+ LRLL H P+LE LG P+ L Sbjct: 259 LPQDGRIRFTTRGVSL----DLRVATFPTLHGESMVLRLLGQHSVSPELESLGLDPSGLQ 314 Query: 114 EL---LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 L L +G++L+TG TGSGK+TTL A + + + + I+T+EDPVEY L Sbjct: 315 ALRAALDRPHGIVLITGPTGSGKTTTLYAALNAI-RSPERKIVTVEDPVEYTLPGVSQLQ 373 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 + EIGL T+ + LR+ LR DPDVI++GE+RD ET +A+ +A TGHLVLATLHT A Sbjct: 374 VKPEIGL---TYGAALRSVLRNDPDVIMIGEIRDQETADIAIRSALTGHLVLATLHTNTA 430 Query: 231 AQAVERLVD 239 A A+ RL+D Sbjct: 431 AGAITRLLD 439 >UniRef50_B8FQ85 Type II secretion system protein E n=2 Tax=Desulfitobacterium hafniense RepID=B8FQ85_DESHD Length = 586 Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 17/212 (8%) Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLG----APTVLP 113 L ++G+ F V A+ LR S+ HG + +R+L Q L+ LG + Sbjct: 273 LPQDGRSSFMVG-AKTIDLRISSLPTVHGEKIVIRILDQDTAQRSLQSLGMSRGVEQSIQ 331 Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 L+K +G+ILV G TGSGK+TTL A++ L +++++EDPVEY + Q Sbjct: 332 RLIKEPHGIILVVGPTGSGKTTTLYALLRELVSE-QLNLVSIEDPVEYQLPGVVSVQVQP 390 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 +IGL TFA GLR+ LR+DPDVI++GE+RD ET R+A+ AA TGHLVL+TLHT AA+A Sbjct: 391 KIGL---TFAQGLRSILRQDPDVIMIGEIRDEETARIAIAAALTGHLVLSTLHTNTAAEA 447 Query: 234 VERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 RL+D +P +A LR VLSQ+L Sbjct: 448 FTRLLD----MGIEPY--LVAAVLRGVLSQRL 473 >UniRef50_B9JMG1 Pilus assembly secretion ATP-binding protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMG1_AGRRK Length = 538 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 86/199 (43%), Positives = 120/199 (60%), Gaps = 26/199 (13%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE-------LLKSENGLILVTGATG 130 R S HG ++ LR+L +L+ L A PE +++ NG++L+TG TG Sbjct: 262 FRVSVMPSIHGETIVLRILDRSNIRLD-LAALGYQPESMATIARIVRRPNGIMLLTGPTG 320 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGK+TTL +++ +N A + I T+EDPVEY A L + IGL TFA+ LR+ L Sbjct: 321 SGKTTTLYSILSDIND-AKSKIFTVEDPVEYRLAGVTQLQVEPSIGL---TFATALRSVL 376 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL----VDSFPAQEK 246 R+DPD+ILLGE+RD ET R+A+ AA TGHLVL+TLHT AA A+ RL V+S+ Sbjct: 377 RQDPDIILLGEIRDPETARIAVQAALTGHLVLSTLHTNSAAGAINRLREMGVESY----- 431 Query: 247 DPVRNQLAGSLRAVLSQKL 265 LA +LR ++ Q+L Sbjct: 432 -----LLAATLRGIIGQRL 445 >UniRef50_C6I0X0 Putative defect in organelle trafficking protein (DotB) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0X0_9BACT Length = 431 Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 149/308 (48%), Gaps = 16/308 (5%) Query: 12 KHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAILLENGQLDF 68 + SD+ L S P R IRGR E P T ++ ++L + + + +F Sbjct: 28 RAGASDILLASESPVRGFIRGRWETVGSRPLKTYELADVLNAIDMGNSSSQVAAGAARNF 87 Query: 69 AVSLAENQ----RLRGSAFAQRH----GISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 A +A + RLR +A R + + R +P P L+ + P L L Sbjct: 88 AYEVAATRESRIRLRVNATGTRRLGPRDLKIVFRTIPDIPPALDSMDLPPDLRASLLPRE 147 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLY----ASQRCLIQQREIG 176 GL+ V GATGSGKST LAA++ + HI T E P+E++Y Q +I Q EI Sbjct: 148 GLVNVAGATGSGKSTLLAAILREKLERGGCHIATAEAPIEFVYDKVETRQTGIICQSEIP 207 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 H +F + LR+ PD IL+GE RD+ETI + A +TGH T+HT G + + R Sbjct: 208 THHPSFGKAVEEMLRQKPDAILVGESRDTETIANTVLACQTGHAAYTTVHTNGVGETIGR 267 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKT 295 + ++FP E+D +L ++R ++ Q+ L GRV + E L+ V ++ Sbjct: 268 MAEAFPGPERDAAAMRLLAAMRVIVHQRLLRRADGSGRVPVREWLVFDREVKRVLFSESW 327 Query: 296 HQLPHVIQ 303 + P +I+ Sbjct: 328 SRWPFLIE 335 >UniRef50_Q3C097 Putative DotB-like type IV secretion system protein n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3C097_XANC5 Length = 398 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 17/258 (6%) Query: 32 GRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLR----GSAFAQRH 87 G + + P+ E L+ +D D F ++ +++ R R G+ Sbjct: 73 GSIAGYLYGGPNAEVQLKRGMDLDN--------AYTFRLNRSDSLRFRWNATGAEIDGSF 124 Query: 88 GISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQH 147 GIS+ LR LP P +++ L L ++G+++V G TGSGKST LA M+ + ++ Sbjct: 125 GISIILRELPEIPPAIDKEDLGDDLYGALYPDDGIVMVCGPTGSGKSTLLAGMIRDIAEN 184 Query: 148 ADAH--ILTLEDPVEYLY---ASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGEL 202 D+H I+T E PVE++Y I+ I H FA+ +R +LR DPD+I++GE+ Sbjct: 185 PDSHCHIITYESPVEFVYDKVEKPTTEIESTSIPDHLPNFAAAIRNSLRRDPDIIVVGEM 244 Query: 203 RDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLS 262 RD ETI A+ A++TGH+V T H+ R + S P E+ + L SLR ++ Sbjct: 245 RDGETIGAAILASQTGHVVYGTAHSTSVGATFTRTMQSLPKNEQQGMLGGLIDSLRLIIC 304 Query: 263 QKLEVDKQEGRVALFELL 280 Q+L RVAL E L Sbjct: 305 QELVQSTDGKRVALREYL 322 >UniRef50_B3PF17 General secretion pathway protein E n=8 Tax=Proteobacteria RepID=B3PF17_CELJU Length = 524 Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 110/277 (39%), Positives = 152/277 (54%), Gaps = 31/277 (11%) Query: 6 IVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I++ +V+ SD+HL R+RI G + P++ +L L D Sbjct: 151 ILSQAVREGASDIHLEPFEDRVSVRFRIDGVLTEVLSPKPELAPVLVSRLKVMARLDIAE 210 Query: 58 AILLENGQLDFAVSLAENQ-RLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTVLPE 114 L ++G++ V LA + +R S G + LRLL QL EQL P + E Sbjct: 211 KRLPQDGRI--TVRLAGHAVDIRVSTIPSAFGERIVLRLLDQAAGQLKLEQLNMPRHVME 268 Query: 115 -----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 LLK +G+ILVTG TGSGK+TTL A + ++N + +ILT+EDPVEYL Sbjct: 269 RFAKNLLKP-HGIILVTGPTGSGKTTTLYAGLSHINTRS-RNILTIEDPVEYLLPG---- 322 Query: 170 IQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 I Q ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 323 IGQTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDGETAEIAIQASLTGHLVLSTLHTN 382 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 A AV RL D +P LA SL V++Q+L Sbjct: 383 TAIGAVLRLKD----MGVEPF--LLASSLEVVMAQRL 413 >UniRef50_D1P420 Protein transport protein HofB n=5 Tax=Enterobacteriaceae RepID=D1P420_9ENTR Length = 465 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/279 (34%), Positives = 156/279 (55%), Gaps = 30/279 (10%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVE-------ELLREWL 52 +E+++ ++V+ SD+H+ R R+ G++ P ++ ++L + Sbjct: 102 VEDLLKMAVRKRSSDIHIEPTKLTVKIRLRVDGKLYVVPSPPHEINNEIIARIKILAKMN 161 Query: 53 DDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP-QLEQLGAPTV 111 ++R + ++GQ+ + +N +R S+ +G L LRLL + +E LG + Sbjct: 162 IAEKR--VPQDGQMSWFFE-GQNFSIRLSSMPTIYGEKLVLRLLNTQLKYSIENLGMCSS 218 Query: 112 LPELLKSE----NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 L LLKS GLILVTG TGSGK+ TL + + YLNQ + +I T+EDP+E + Sbjct: 219 LLPLLKSNLQRPQGLILVTGPTGSGKTVTLYSALEYLNQ-SYRNISTIEDPIEIPLSG-- 275 Query: 168 CLIQQREI-GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 I Q ++ + +TFA LRA LR+DPDVI++GE+RD ET ++A AA+TGHLVL+TLH Sbjct: 276 --INQTQVHEKYDLTFAYILRALLRQDPDVIMIGEIRDEETAQIATRAAQTGHLVLSTLH 333 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 T A+ R+ ++ + QL L+ V++Q+L Sbjct: 334 TNCTISAITRM------EQLGIDKTQLQACLKMVIAQRL 366 >UniRef50_B5YDI2 Type IV pilus assembly protein PilB n=20 Tax=Bacteria RepID=B5YDI2_DICT6 Length = 873 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/127 (55%), Positives = 91/127 (71%), Gaps = 6/127 (4%) Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 ++LK+ G+ILVTG TGSGKSTTL A + +N D +I+T+EDPVEY Q I Q Sbjct: 616 KMLKTPYGIILVTGPTGSGKSTTLYASLNMIN-SPDINIITVEDPVEY----QLPGIHQV 670 Query: 174 EIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQ 232 ++ +TFAS LR+ LR+DPDV+L+GE+RD ET R+A+ AA TGHLVL+TLHT A Sbjct: 671 QVNPKAGLTFASALRSILRQDPDVVLVGEIRDEETARIAIQAALTGHLVLSTLHTNDAPS 730 Query: 233 AVERLVD 239 AV RL+D Sbjct: 731 AVTRLID 737 >UniRef50_A6M148 Type II secretion system protein E n=18 Tax=Clostridiaceae RepID=A6M148_CLOB8 Length = 564 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/247 (37%), Positives = 144/247 (58%), Gaps = 25/247 (10%) Query: 10 SVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEEL--------LREWLDDDQRA 58 SV+ SD+H+ + R+RI G+++ +T +E L + L+ ++ Sbjct: 191 SVEMKTSDIHIEPFENEIRIRYRIDGKLQTV--NTLGIESLGPLVTRIKILAGLNIAEKR 248 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV----L 112 I ++G++ F V A+ LR S +G + +R+L ++ L +QLG L Sbjct: 249 IP-QDGRIMFEVDGAQVD-LRVSILPVVNGEKIVIRILNTNGSILSKKQLGMSEENIHRL 306 Query: 113 PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQ 172 ++ + +G+ILVTG TGSGKSTTL +++ LN ++ +I+T+EDPVEY + Sbjct: 307 NRIIGNPHGIILVTGPTGSGKSTTLYSILNELNSNS-VNIITVEDPVEYTMNGINQVSVN 365 Query: 173 REIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQ 232 + GL TFASGLR+ LR+DPD+I++GE+RD ET +A AA TGHLVL+TLHT A Sbjct: 366 EKAGL---TFASGLRSILRQDPDIIMIGEVRDEETAEIATRAAITGHLVLSTLHTNDAPS 422 Query: 233 AVERLVD 239 ++ RL+D Sbjct: 423 SIIRLID 429 >UniRef50_B1I3E7 Type II secretion system protein E n=4 Tax=Clostridia RepID=B1I3E7_DESAP Length = 561 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/267 (40%), Positives = 142/267 (53%), Gaps = 46/267 (17%) Query: 11 VKHNV--SDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDF 68 V HN+ HL ++ +R ++ M+ A P D + + +E +D Sbjct: 214 VLHNILQPPRHLHASLVSRIKVMANMDIAERRVPQ----------DGRFTLRVEGKTIDV 263 Query: 69 AVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTVLPELL-------KSE 119 V+ L GS +G L LRLL LE+LG P PE+L + Sbjct: 264 RVA-----SLPGS-----YGEKLTLRLLDRSVRLISLEELGFP---PEVLANYRKVMRRP 310 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEY-LYASQRCLIQQREIGLH 178 GLILVTG TGSGKSTTL A + LN + H++T+EDPVEY L + I R Sbjct: 311 YGLILVTGPTGSGKSTTLYATLSALNT-PEKHVVTVEDPVEYRLDGVNQIQINPRA---- 365 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +TFA+GLR+ LR DPD+I++GE+RD ET R+A+ AA TGHLVL+TLHT AA AV RL Sbjct: 366 GLTFATGLRSILRNDPDIIMVGEIRDRETARIAVEAALTGHLVLSTLHTNDAAGAVTRLG 425 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKL 265 D +P A SL AV+ Q+L Sbjct: 426 D----MGIEPFLT--ASSLVAVVGQRL 446 >UniRef50_A4XWG4 General secretory pathway protein E n=4 Tax=Bacteria RepID=A4XWG4_PSEMY Length = 495 Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/259 (38%), Positives = 142/259 (54%), Gaps = 41/259 (15%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR--AILLEN 63 I+ ++K N SD+HL + R +R R V+ +LRE L+ + A+L+ Sbjct: 122 ILGEAIKENASDIHL-ETFEKRLVVRFR----------VDGILREVLEPKRELAALLVSR 170 Query: 64 ----GQLDFA---------VSLAENQR---LRGSAFAQRHGISLALRLLPSHCPQL--EQ 105 +LD A +SL R +R S +G + LRLL +L + Sbjct: 171 VKVMARLDIAEKRVPQDGRISLKVGGREVDIRVSTLPSANGERVVLRLLDKQAGRLSLQH 230 Query: 106 LGAPT----VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEY 161 LG ++ E ++ +G++LVTG TGSGK+TTL A + LN H +ILT+EDP+EY Sbjct: 231 LGMRAEDRALMEETVRKPHGILLVTGPTGSGKTTTLYASLVSLNDHT-RNILTVEDPIEY 289 Query: 162 LYASQRCLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHL 220 I Q ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHL Sbjct: 290 HLEG----IGQTQVNAKVDMTFARGLRAILRQDPDVVMVGEIRDKETAEIAVQASLTGHL 345 Query: 221 VLATLHTRGAAQAVERLVD 239 VL+TLHT A A+ RLVD Sbjct: 346 VLSTLHTNSAIGAITRLVD 364 >UniRef50_A3CR73 PilB-like pili biogenesis ATPase, putative n=2 Tax=Firmicutes RepID=A3CR73_STRSV Length = 560 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 90/252 (35%), Positives = 141/252 (55%), Gaps = 21/252 (8%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRG------RMEAAPFDTPDVEELLREWLD 53 ++ I++ ++K SD+H+ R+R+ G +++A + LD Sbjct: 181 IDSIISQAIKTRTSDIHIEPFEKVVRVRFRVDGTLVENMQLKANAHSAIATRIKIMSGLD 240 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLG-APT 110 +R I ++G+++ + E +R S G + +R+L + L E+LG +PT Sbjct: 241 IAERRIP-QDGRIETTIDGKEVD-MRVSVLPTVFGEKIVIRILSRNATLLSKEELGFSPT 298 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + ++LK+ G+IL+TG TGSGK+TTL + LN +I+T+EDPVEY Sbjct: 299 NQKLFEDILKAPEGIILLTGPTGSGKTTTLYTALRELND-VGKNIITVEDPVEYRLEGVN 357 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFASGLR+ LR+DPD++LLGE+RD ET +A+ AA TGH+VL+T+HT Sbjct: 358 QVQVNNKAGL---TFASGLRSILRQDPDIVLLGEIRDEETASIAVRAAITGHVVLSTIHT 414 Query: 228 RGAAQAVERLVD 239 A V RLVD Sbjct: 415 NDTASTVNRLVD 426 >UniRef50_D1N174 Type II secretion system protein E n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N174_9BACT Length = 534 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 84/182 (46%), Positives = 112/182 (61%), Gaps = 26/182 (14%) Query: 89 ISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHA 148 ++ LR L LEQ EL++ +G+ILV G TGSGK+TTL +++ LN H Sbjct: 280 VTFDLRTLGMSDRDLEQFN------ELIQIPHGMILVVGPTGSGKTTTLYSVIAQLNDHR 333 Query: 149 DAHILTLEDPVEYLYASQRCLIQ-QREIGLHCMTFASGLRAALREDPDVILLGELRDSET 207 I+T+EDPVEY A C +Q +IG+ TFASGLR+ +R+DPD+IL+GE+RD ET Sbjct: 334 -KKIITVEDPVEYKMAGL-CQMQVNSKIGV---TFASGLRSIVRQDPDIILVGEIRDRET 388 Query: 208 IRLALTAAETGHLVLATLHTRGAAQAVERLVD----SFPAQEKDPVRNQLAGSLRAVLSQ 263 +A+ AA TGHLVL+TLHT A AV RL+D SF +A +L VLSQ Sbjct: 389 ADIAINAALTGHLVLSTLHTNDAVGAVTRLIDMGMESF----------LVASALYGVLSQ 438 Query: 264 KL 265 +L Sbjct: 439 RL 440 >UniRef50_C8W151 Type II secretion system protein E n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W151_DESAS Length = 545 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 110/285 (38%), Positives = 141/285 (49%), Gaps = 38/285 (13%) Query: 3 MEEIVALSVKHNVSDLHL---CSAWPARWRIRG------RMEA--APFDTPDVEELLREW 51 +E ++ +V SDLHL R R+ G RM A AP + L Sbjct: 166 LEGLIIKAVAQRASDLHLEPLSDGLRVRMRVDGMLKTVDRMPASVAPLIISRTKVLCNMN 225 Query: 52 LDD-----DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--E 104 + D D + +NG D + +R S G LR LPS L E Sbjct: 226 IADKRSPQDGGFVFSQNGSGD-------SINVRVSTLPCAKGEKAVLRFLPSQDRLLGIE 278 Query: 105 QLG----APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE 160 LG A LL +GLILVTG TGSGK+ TL A + YL ++ T+EDP+E Sbjct: 279 DLGMEEDAQESFRSLLDLPHGLILVTGPTGSGKTNTLYAALKYLRSDG-VNVTTIEDPIE 337 Query: 161 YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHL 220 + Q + +TF+S LRA LR+DPD+I++GE+RD ET LAL AA TGHL Sbjct: 338 L--QMEGITQTQADYSSKKLTFSSALRAILRQDPDIIMVGEIRDGETAGLALQAALTGHL 395 Query: 221 VLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 VL+TLHT AA AVERLVD R + SLRAVL+Q+L Sbjct: 396 VLSTLHTNDAASAVERLVDMGCE------RYLVNSSLRAVLAQRL 434 >UniRef50_A0Q077 General secretion pathway protein E n=3 Tax=Clostridium RepID=A0Q077_CLONN Length = 515 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 148/275 (53%), Gaps = 27/275 (9%) Query: 6 IVALSVKHNVSDLHL---CSAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I+ ++ SD+HL + R+RI G + +V L+ + D + Sbjct: 142 IINQAINKKASDIHLEPFKNKVIVRFRIDGVLNERMTIPKEVYVLVNTRIKIKSGMDISK 201 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL------EQLGAPTV 111 ++ ++G++++ + LR S+ +G + +R+L + E + Sbjct: 202 KMIPQDGKMEYEFR-DKTFNLRVSSIPTINGEKIVIRILYKTNKNIDINNLIEDQDDLIL 260 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 + ++L +G+ILVTG TGSGK+TTL +M+ LN + +I+T+EDPVEY + Sbjct: 261 IKKILSHPSGIILVTGPTGSGKTTTLCSMLNELNSK-ERNIVTIEDPVEYEIERINQMNV 319 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 + GL TF+S LR+ LR+DPD I++GE+RD+ET +++ AA TGHLVL+TLHT+ AA Sbjct: 320 NNKAGL---TFSSALRSILRQDPDTIMIGEIRDAETADISVKAAITGHLVLSTLHTKDAA 376 Query: 232 QAVERLVDSFPAQEKDPVRNQL-AGSLRAVLSQKL 265 RL D V N L A SL AV++Q+L Sbjct: 377 TTPMRLCDM-------NVENYLIADSLVAVIAQRL 404 >UniRef50_A3UGZ5 Probable type II secretion protein n=2 Tax=Proteobacteria RepID=A3UGZ5_9RHOB Length = 600 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/168 (48%), Positives = 103/168 (61%), Gaps = 10/168 (5%) Query: 78 LRGSAFAQRHGISLALRLLPS--HCPQLEQLG--AP--TVLPELLKSENGLILVTGATGS 131 LR S+ G SL LRLL P L+ LG P V +++ NG+ILVTG TGS Sbjct: 278 LRVSSLPGAWGESLVLRLLRKRQELPSLDGLGLQGPQRKVFDRIIREPNGVILVTGPTGS 337 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GKSTTL + +N A I+T+EDPVEY + + +IG FA GLRA LR Sbjct: 338 GKSTTLYRALELVNDGA-RKIITIEDPVEYDMDGVTQVQARADIGYD---FARGLRAILR 393 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +DPDVI++GE+RD ET R+A+ AA TGHLV +TLHT A A+ERL D Sbjct: 394 QDPDVIMIGEIRDGETARIAIQAALTGHLVFSTLHTNTALGAIERLTD 441 >UniRef50_D1B5J6 Type II secretion system protein E n=3 Tax=Synergistaceae RepID=D1B5J6_THEAS Length = 559 Score = 127 bits (318), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/252 (38%), Positives = 141/252 (55%), Gaps = 27/252 (10%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT--------PDVEELLR--EWLDDD 55 I+ +VK SD+H+ + R+R R++ A FD+ P V ++ +D Sbjct: 188 IMEQAVKEGTSDIHI-EVFERSARVRYRIDGALFDSLEYPRNLHPAVCSRIKIMSGMDIS 246 Query: 56 QRAILLENGQLDFAVSLAENQR--LRGSAFAQRHGISLALRLLPSHCPQ--LEQLG---- 107 +R ++G++ V N+R LR S+ G + +RLL LE+LG Sbjct: 247 ERR-KPQDGRILVKVG---NKRVDLRVSSLPALFGEKIVMRLLDQENAMVGLEKLGFEPN 302 Query: 108 APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 +L +++ G+ILVTG TGSGKSTTL +++ +N D +I+T+EDPVEY Sbjct: 303 EKALLEDMISLPYGIILVTGPTGSGKSTTLYSLLEVMNT-PDVNIITVEDPVEYTMPGIT 361 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TF+ LR+ LR+DPD I+LGE+RD ET +LA+ AA TGHLVL+TLHT Sbjct: 362 QVQVNEKAGL---TFSETLRSILRQDPDKIMLGEIRDQETAQLAIRAALTGHLVLSTLHT 418 Query: 228 RGAAQAVERLVD 239 A AV RL+D Sbjct: 419 NDAPSAVARLLD 430 >UniRef50_Q5WF17 Late competence protein ComGA n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WF17_BACSK Length = 341 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 120/211 (56%), Gaps = 17/211 (8%) Query: 78 LRGSAFAQRHGISLALRLLPSHCP----QLEQLGAPT-VLPELLKSENGLILVTGATGSG 132 LR S + SLA+R+ P P L + T EL +NGL+L TGATGSG Sbjct: 90 LRFSTLPAKPSESLAIRISPRTTPYTLQSLSLFASDTRKFTELAHCQNGLVLFTGATGSG 149 Query: 133 KSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALRE 192 K+T++ A++ Y+ Q + I+T+EDP+E + + G+ TFA+ L+A LR Sbjct: 150 KTTSVYALLDYVQQSSTKMIVTIEDPIERPIDGMVQIETNEKAGI---TFATALKAVLRH 206 Query: 193 DPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQ 252 DPDVI++GE+RD T LAL AA TGHLV+A+LH A+ A RL A+ VR + Sbjct: 207 DPDVIVIGEIRDRNTAELALQAATTGHLVIASLHAASASLAFARL-----AELGVNVRVE 261 Query: 253 LAGSLRAVLSQKL-EVDKQEGRVALFELLIN 282 +RAV+ QKL +V + RVA FE L+ Sbjct: 262 C---VRAVIHQKLAKVVSKNKRVAFFEWLLK 289 >UniRef50_B0MCL3 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MCL3_9FIRM Length = 558 Score = 127 bits (318), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 147/298 (49%), Gaps = 48/298 (16%) Query: 68 FAVSLAE-NQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPT----VLPELLKSEN 120 F + L E N +R S +G LRLL + P E G + LLKS N Sbjct: 254 FKMRLEEDNINMRVSVIPTVYGEKSVLRLLSNRTPIDHKEHFGMNSENYEKFQSLLKSPN 313 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 G++ +TG TGSGKSTTL ++ YL++ +A+I T+EDPVE A + GL Sbjct: 314 GILYITGPTGSGKSTTLYMVLEYLSKR-NANISTIEDPVEKNIARVNQMQVNNTSGL--- 369 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 TF +GLRA LR+DPD+I++GE RD+ET +++ AA TGH VL++LHT A ++ RLVD Sbjct: 370 TFETGLRALLRQDPDIIMVGETRDAETASISVRAAITGHFVLSSLHTNNAVSSIVRLVDM 429 Query: 241 FPAQEKDPVRNQLAGSL----------------------RAVLSQKLEVDKQ-------- 270 E V N L G + R +L + +E K+ Sbjct: 430 --GVEPYLVANSLIGLVAQRLVRKVCPDCAKKVRTTEEDRKILGEDIEYVKEAVGCSKCS 487 Query: 271 ----EGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 +GR+A+ E+ + + +I EG+ T +Q GM T ++S V EG Sbjct: 488 HTGYQGRIAVHEIAVIDQGIRKMISEGRQVDEIQDYVTREQ-GMKTLKESAADLVKEG 544 >UniRef50_C3MFK5 General secretion pathway protein E, GspE n=1 Tax=Rhizobium sp. NGR234 RepID=C3MFK5_RHISN Length = 545 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/220 (39%), Positives = 126/220 (57%), Gaps = 30/220 (13%) Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLG---- 107 D + + L ++DF VS+ HG ++ LRLL + P L+ LG Sbjct: 252 DGRMRLALRGNEVDFRVSI----------IPSVHGETIVLRLLHAQVPSLDLATLGFDPP 301 Query: 108 APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 A + ++ +S NG+++VTG TGSGK+TTL ++V LN+ I T+EDPVEY Q Sbjct: 302 ARDTIADIARSPNGVLIVTGPTGSGKTTTLYSLVKDLNKEG-VKIFTIEDPVEY----QM 356 Query: 168 CLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + Q ++ + FA LR+ LR+DPD+IL+GE+RD ET ++A+ AA TGHLVL TLH Sbjct: 357 EGVTQLQVNAAVDLDFARALRSVLRQDPDIILVGEIRDRETAQIAIQAALTGHLVLTTLH 416 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQL-AGSLRAVLSQKL 265 T AA AV RL D + L + +LR V++Q+L Sbjct: 417 TNDAAGAVTRLRDM-------GIEGYLISATLRGVIAQRL 449 >UniRef50_Q15ZI3 Type II secretion system protein E n=119 Tax=Proteobacteria RepID=Q15ZI3_PSEA6 Length = 637 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 119/205 (58%), Gaps = 25/205 (12%) Query: 75 NQRLRG-------SAFAQRHGISLALRLLPSHCP--QLEQLGAPTVLPE----LLKSENG 121 N R++G S ++G S+ +RLL LEQ G P L + LL+ +G Sbjct: 256 NMRIKGHSIDVRVSTMPVQNGESVVMRLLDQSAGVLSLEQTGMPAALLKRFRVLLRRPHG 315 Query: 122 LILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMT 181 +ILVTG TGSGK+TTL + LNQ + A I+T+EDPVEY + +IGL+ Sbjct: 316 MILVTGPTGSGKTTTLYGALSELNQPS-AKIITVEDPVEYRLPRINQVQTNSKIGLN--- 371 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD-S 240 F++ LR LR+DPD+I++GE+RD ET + L A TGHLVL+TLHT A + RL+D Sbjct: 372 FSNVLRTTLRQDPDIIMVGEMRDQETAEIGLRGALTGHLVLSTLHTNDAISSAVRLLDMG 431 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKL 265 P +A SLRAV++Q+L Sbjct: 432 APGY-------LVASSLRAVIAQRL 449 >UniRef50_C1SHL1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL1_9BACT Length = 482 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 27/271 (9%) Query: 10 SVKHNVSDLH---LCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQRAILL 61 + K+ SD+H L + R+RI G++ ++E + + D Sbjct: 112 AAKNGASDIHFEGLTGKFAVRFRIDGKLHTVKQYPKSLQESIIARIKVVSDLDVAETRKA 171 Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAP-TVLPEL--- 115 ++G+++ + + +R S G LR+L +++ G P ++P Sbjct: 172 QDGRINLRIG-NRDVDIRVSTVPSVTGEKAVLRILEKSKSLVTIDKTGLPENLVPRFRKA 230 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 +K NG+ILVTG TGSGK+TTL A + L D +I+T+EDPVEY Q I Q ++ Sbjct: 231 IKRPNGIILVTGPTGSGKTTTLYAALQELVSD-DTNIMTIEDPVEY----QMEKITQVQV 285 Query: 176 GLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +TFAS +RA LR+DPD+IL+GE+RD+ET + A+ A+ TGHLVL+TLHT A AV Sbjct: 286 NRTVDITFASAVRAFLRQDPDIILIGEIRDTETAQAAIQASLTGHLVLSTLHTNNAPTAV 345 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 RL+D + +P L+ S+ AVL Q+L Sbjct: 346 ARLID----MDVEPF--LLSSSIVAVLGQRL 370 >UniRef50_B1ZUM1 Type II secretion system protein E n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUM1_OPITP Length = 586 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/257 (36%), Positives = 141/257 (54%), Gaps = 29/257 (11%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLR------------E 50 + +++A +V+ +D+H + RIR R++ P E LLR Sbjct: 198 VSDVIAQAVEDQATDIHF-EPQEGQLRIRYRVDGLLVPVPVPENLLRFQDAIISRLKIMA 256 Query: 51 WLDDDQRAILLENGQLDFAVSLAENQRL--RGSAFAQRHGISLALRLL--PSHCPQLEQL 106 L+ +R L ++G+++F AEN L R S + S++LRLL +++L Sbjct: 257 RLNISERR-LPQDGRINFR---AENTVLDIRVSTIPTIYAESVSLRLLNQKKEAYSMDRL 312 Query: 107 GAPTV----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYL 162 G + ++L +G+ILVTG TGSGKST+L A + +N D I+T+EDP+EY Sbjct: 313 GMSAEEQAQISQVLDYPHGIILVTGPTGSGKSTSLNAFLRKINS-TDLRIITIEDPIEYE 371 Query: 163 YASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVL 222 + + EIGL TFA LR LR+DPDVI++GE+RD +T +A+ A+ TGHLV Sbjct: 372 VPGVNQMQVRPEIGL---TFADALRHVLRQDPDVIMVGEIRDKDTAEIAIRASLTGHLVF 428 Query: 223 ATLHTRGAAQAVERLVD 239 +TLHT A A+ RLVD Sbjct: 429 STLHTNDAPGAITRLVD 445 >UniRef50_A9AU04 Twitching motility protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU04_BURM1 Length = 500 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/245 (37%), Positives = 139/245 (56%), Gaps = 45/245 (18%) Query: 87 HGISLALRLLPSH-CPQLEQLG-APTVLPELLKS---ENGLILVTGATGSGKSTTLAAMV 141 +G + RLL + P+L +LG + +V ++++ +GLILVTG TGSGK+T L A++ Sbjct: 155 NGFAFICRLLDAQRAPELHELGLSYSVYRTIMRAISKPSGLILVTGPTGSGKTTLLNAIL 214 Query: 142 GYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGE 201 LN A I T+E+PVE + I+QR++ + +TFA LR+ LR DPDVI++GE Sbjct: 215 SVLNDETRA-IETIENPVE-IALRGNGPIRQRQVSGN-ITFARALRSILRSDPDVIMVGE 271 Query: 202 LRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVL 261 +RDSET+ +AL AA+TGH+VL+TLHT +A+ R +D + +D R LA +L+AV+ Sbjct: 272 IRDSETMEIALQAAQTGHIVLSTLHTNNSAETYTRALDLTKDKARDAYR--LAETLKAVI 329 Query: 262 SQK---------------------LEVD--------------KQEGRVALFELLINTPAV 286 S + LE + K G+VA+ E+++ TP V Sbjct: 330 SLRRIDRYAGESVVRALTRDEQLWLEANGIDLGDSIREVVPSKHVGKVAIVEVIVTTPEV 389 Query: 287 GNLIR 291 L+R Sbjct: 390 KQLLR 394 >UniRef50_Q1Q109 Strongly similar to general secretory system type II protein, ATPase component n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q109_9BACT Length = 582 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 101/273 (36%), Positives = 149/273 (54%), Gaps = 31/273 (11%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFD--TPDVE--------ELLREWLDDDQRAI 59 +V SD+H A+ +R+R R++ ++ +P E + +D +R Sbjct: 210 AVLDKASDIHY-EAFEDSFRVRYRIDGVLYERVSPPRELGIPINSRIKVMAGMDISERR- 267 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPT----VLP 113 L ++G++ V A + LR S + G S+ +RLL L ++LG + + Sbjct: 268 LPQDGRIKLNVGGA-SIDLRVSTLPTKFGESIVMRLLDKSAVSLSLDKLGFRSEELKNIY 326 Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 +LL NG+ILVTG TGSGK+TTL A + YLN+ I+T EDPVEY LIQ + Sbjct: 327 QLLNIPNGIILVTGPTGSGKTTTLYAALNYLNEIT-TKIITTEDPVEY---DVDGLIQVQ 382 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 + FAS LR+ LR+DPD+IL+GE+RD ET R+A+ A+ TGHLV +TLHT A Sbjct: 383 VNPSIGVDFASCLRSILRQDPDIILVGEIRDEETARIAIQASLTGHLVFSTLHTNDAPLT 442 Query: 234 VERLVDSFPAQEKDPVRNQL-AGSLRAVLSQKL 265 + RL+D V+ L A +L V+SQ+L Sbjct: 443 ITRLIDI-------GVKPYLIASTLECVISQRL 468 >UniRef50_A7BSG5 Bacterial type II secretion system protein E n=1 Tax=Beggiatoa sp. PS RepID=A7BSG5_9GAMM Length = 512 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 17/212 (8%) Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLG-AP---TVLP 113 L ++G+L+ VS ++ +R S HG S+ +RLLP +L QLG AP Sbjct: 192 LPQDGRLNTRVS-GQDLDIRVSCLPGVHGESIVMRLLPKERQTSRLGQLGMAPDHHNQFS 250 Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 + + +G+ILVTG TGSGKSTTL A + +N I+T+EDPVEY + Sbjct: 251 QWISEPHGIILVTGPTGSGKSTTLYAALDAVNNRTQK-IITVEDPVEYQLNGITQVQAHS 309 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 +IG TFA LR+ LR+DPD++++GE+RD ET +A+ AA TGH+VL+TLHT A A Sbjct: 310 DIGY---TFAHALRSILRQDPDIVMIGEVRDRETSEIAIQAALTGHMVLSTLHTNDAVSA 366 Query: 234 VERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 RL++ +P +A S+RAV +Q+L Sbjct: 367 FTRLIE----MGIEPFL--VATSVRAVQAQRL 392 >UniRef50_A6DAK8 Putative type ii protein secretion e n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAK8_9PROT Length = 544 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 133/258 (51%), Gaps = 39/258 (15%) Query: 6 IVALSVKHNVSDLHLC---SAWPARWRIRGRM-EAAPFDTPDVEEL-----LREWLD--- 53 I+ S+ HN SD+H+ R RI G + E FD L L +D Sbjct: 171 IIKSSIDHNASDIHIEPDEDGAIIRIRIYGTLFEKWDFDIGVYNALSSRIKLEAGMDVSE 230 Query: 54 -----DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQL 106 D ++ ++ DF R S G S+ +R+L L+ + Sbjct: 231 KRKPQDGSFSMDIDGNHFDF----------RVSTLPTVWGESIVIRILDKRNIVKSLDSI 280 Query: 107 GAPTVLPELLKS----ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYL 162 G ELLKS NG++LVTG TGSGK+TTL A + + D ++T+EDPVEY Sbjct: 281 GISPQNLELLKSGLKKPNGILLVTGPTGSGKTTTLYASLHEITG-IDRKVITVEDPVEYK 339 Query: 163 YASQRCLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLV 221 IQQ E+ +TFAS L++ LR+DPD+I++GE+RD ET+ +A+ AA TGHLV Sbjct: 340 LHG----IQQVEVNPKTGLTFASALKSILRQDPDIIMIGEIRDLETLEIAIKAALTGHLV 395 Query: 222 LATLHTRGAAQAVERLVD 239 L+TLHT A A+ R++D Sbjct: 396 LSTLHTNDAVSAISRMID 413 >UniRef50_A3WNH5 Type II secretory pathway, ATPase PulE n=1 Tax=Idiomarina baltica OS145 RepID=A3WNH5_9GAMM Length = 420 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 161/294 (54%), Gaps = 25/294 (8%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPA---RWRIRGRM-EAAPFDTPDVEELLREWLD--- 53 +N + ++A + + N SD+H+ S R RI+GR+ E DV+ L+ + Sbjct: 89 LNAQSVLANARRLNASDIHIESLREGGRIRLRIQGRLIEQRRLSQHDVDTLVAQLKVMAE 148 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT 110 D + ++G++D + + R R ++ G SL +R L S P L QLG Sbjct: 149 VDVTESKQPQDGRIDLELP-DSSARFRLNSCPGNRGESLVIRCLYSAEQLPSLHQLGFTD 207 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 L + L S GLILV+G TGSGKSTT+ +++ L++ + + ++EDP+E Sbjct: 208 RQFHHLIKQLSSAIGLILVSGPTGSGKSTTMYSIIKQLSE-SGLRVCSVEDPIEVELDG- 265 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 ++Q + ++FA LRA LR+DPDVI++GE+RD+ET ++A+ AA TGHLV+A++H Sbjct: 266 --ILQTQVHSQRNLSFAKVLRAFLRQDPDVIMIGEIRDAETAKIAVQAALTGHLVIASIH 323 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELL 280 A + RLV AQ+ D + +LR ++SQ+L Q G +FELL Sbjct: 324 ADTAIDVIRRLVQ-LGAQQTD-----VTAALRLLISQRLLAQAQGGVKVIFELL 371 >UniRef50_C6BWY7 Type II secretion system protein E n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWY7_DESAD Length = 530 Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 125/229 (54%), Gaps = 25/229 (10%) Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L+ +G ILVTG TGSGK+TTL A + Y+ + + I+T EDPVEY + + Sbjct: 294 LVHRPHGAILVTGPTGSGKTTTLYASLNYI-KSPELKIITTEDPVEYQLRGIDQIQVNPK 352 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +GL TFA+ LR+ LR+DPDVI++GE+RD ET +A+ ++ TGHLVL+TLHT A A+ Sbjct: 353 VGL---TFAAALRSILRQDPDVIMVGEIRDFETAEIAIQSSLTGHLVLSTLHTNDAPTAI 409 Query: 235 ERLVDS--FPAQEKDPVRNQLA-----------------GSLRAVLSQKLEVDKQEGRVA 275 RLV+ P + +A G +AV + + +GR+ Sbjct: 410 TRLVEMGIAPYLAAPTLAGAMAQRLLRRLCSNCKKQGADGKWQAVGCEVCDGSGYKGRLG 469 Query: 276 LFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 +FELLINTPA+ LI+ G + + Q+ GM T Q + +G Sbjct: 470 IFELLINTPAIQTLIQNGASAA--DIGAQAQKEGMRTLLQDGLAKAAKG 516 >UniRef50_A1TQP6 Type II secretion system protein E n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TQP6_ACIAC Length = 410 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/247 (34%), Positives = 134/247 (54%), Gaps = 22/247 (8%) Query: 46 ELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRH--------GISLALRLLP 97 E R+W D + NG L ++L+ + F R G L LR L Sbjct: 86 EPARKWQD----LVAQSNGCLHPMITLSAPSPTGDTTFRVRFTLQRQDMGGYGLMLRCLR 141 Query: 98 SHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLED 157 +E+LG P+ + L ++ +GL+LVTG TG+GKSTT AA++ +N+ ++I+ +E+ Sbjct: 142 PVPESIEELGLPSTVHALCQAGHGLVLVTGRTGAGKSTTTAALIHQINRSTTSNIVVIEE 201 Query: 158 PVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAET 217 P+E+++ + RE+G+ T+A+G+ LR PDVI +GE+RD ET+R A+ AAE+ Sbjct: 202 PIEFIHRPDKARFTYREVGVDVDTYANGVEQVLRYVPDVISIGEIRDPETMRAAVRAAES 261 Query: 218 GHLVLATLH---TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGR 273 GHLV T+H T GA + +DS P + + A +L V++Q L K G+ Sbjct: 262 GHLVFGTIHAANTTGAIRKALGYLDS-PGE-----KLSFATNLVGVIAQALLPAKTGTGK 315 Query: 274 VALFELL 280 FE++ Sbjct: 316 ALAFEVM 322 >UniRef50_A5KT43 Type II secretion system protein E n=6 Tax=candidate division TM7 RepID=A5KT43_9BACT Length = 593 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/277 (35%), Positives = 156/277 (56%), Gaps = 39/277 (14%) Query: 10 SVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLDD-DQRAILLENGQ 65 +++ N SD+H+ R+RI G ++ +V L ++ L+ R +L N + Sbjct: 189 AIRSNASDIHIEPREDFVQIRYRIDGVLQ-------EVNRLPQKVLNALVSRIKILSNLK 241 Query: 66 LD---------FAVSLA-ENQRLRGSAFAQRHGISLALRLLP-SHCPQ-LEQLG----AP 109 +D F +++ LR S G +ALR+L S Q LEQLG + Sbjct: 242 IDERRVPQDGRFKIAVGGRPYALRVSTLPVSDGEKVALRILDESDTAQTLEQLGYWGRSL 301 Query: 110 TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 V+ + +G++LVTG TGSGKST+L +++ LN+ + +I T+EDP+EY Sbjct: 302 DVVNHAITQPHGMVLVTGPTGSGKSTSLFSILTTLNKPS-VNISTVEDPIEYRIPG---- 356 Query: 170 IQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q ++ MTFA+GLRA LR+DP++I++GE+RDSET LA+ AA TGHLV +TLHT Sbjct: 357 VNQTQVNPKAGMTFANGLRALLRQDPNIIMVGEIRDSETANLAVQAALTGHLVFSTLHTN 416 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 A+ ++ RL+D +P +A ++RAV+ Q+L Sbjct: 417 NASTSLPRLLD----MNIEPFL--IASTVRAVIGQRL 447 >UniRef50_P45759 Probable general secretion pathway protein E n=31 Tax=Gammaproteobacteria RepID=GSPE_ECOLI Length = 493 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 100/279 (35%), Positives = 149/279 (53%), Gaps = 35/279 (12%) Query: 6 IVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I++ ++K SD+H+ + R+RI G + + LL + D Sbjct: 115 ILSEAIKETASDIHIETYEKTMSIRFRIDGVLRTILQPNKKLAALLISRIKVMARLDIAE 174 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV---- 111 + ++G++ + N +R S +G LRLL + QL LG Sbjct: 175 KRIPQDGRISLRIG-RRNIDVRVSTLPSIYGERAVLRLLDKNSLQLSLNNLGMTAADKQD 233 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 L L++ +G+ILVTG TGSGKSTTL A++ LN +ILT+EDPVEY I Sbjct: 234 LENLIQLPHGIILVTGPTGSGKSTTLYAILSALNTPG-RNILTVEDPVEYELEG----IG 288 Query: 172 QREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 Q ++ M+FA GLRA LR+DPDV+++GE+RD+ET ++A+ A+ TGHLVL+TLHT A Sbjct: 289 QTQVNTRVDMSFARGLRAILRQDPDVVMVGEIRDTETAQIAVQASLTGHLVLSTLHTNSA 348 Query: 231 AQAVERL----VDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 + AV RL V+SF L+ SL +++Q+L Sbjct: 349 SGAVTRLRDMGVESF----------LLSSSLAGIIAQRL 377 >UniRef50_C0A4E0 Type II secretion system protein E n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=C0A4E0_9BACT Length = 574 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 151/272 (55%), Gaps = 29/272 (10%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAI---------L 60 +++ SD+HL R+R+R R++ + + L+ + + + + Sbjct: 200 AIQRRASDIHL-EPMEKRFRVRYRIDGVLIEVDGPPKRLQLAVISRVKIMANISIAEKRI 258 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPT----VLPE 114 ++G++ S + LR S+ HG S+ +R+L QL QLG + + + Sbjct: 259 PQDGRIQINFS-GKQIDLRVSSLPTAHGESIVMRILDKEGLQLGLPQLGFMSDDQATMEK 317 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 ++ +G+ LVTG TGSGK+TTL + + ++N+ D ++T+EDPVEY + + + E Sbjct: 318 IISMPDGIFLVTGPTGSGKTTTLYSCLHFINK-PDRKLITVEDPVEYQLSGINQVPVRHE 376 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +G MTFAS LRA LR+ P+++++GE+RD ET +A+ A+ TGH+V +TLHT A AV Sbjct: 377 VG---MTFASALRAMLRQAPNIVMVGEIRDLETAEIAINASLTGHMVFSTLHTNDAPGAV 433 Query: 235 ERLVDSFPAQEKDPVRNQLAG-SLRAVLSQKL 265 RL+D V+ L SLRAV++Q+L Sbjct: 434 TRLIDIG-------VKPFLVSTSLRAVMAQRL 458 >UniRef50_Q48JN2 General secretion pathway protein GspE n=3 Tax=Proteobacteria RepID=Q48JN2_PSE14 Length = 472 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 101/281 (35%), Positives = 145/281 (51%), Gaps = 47/281 (16%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQL--EQLG-APTVLP---ELLKSENGLILVTGATGS 131 +R S HG + +RLL +L E LG AP VL L++ +G++LVTG TGS Sbjct: 191 IRVSTVPTGHGERVVMRLLDKQAGRLRLETLGMAPDVLTRLDNLIRQPHGIVLVTGPTGS 250 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC-MTFASGLRAAL 190 GK+T+L A + L+ + ++ILT+EDPVEY I Q ++ MTFA LRA L Sbjct: 251 GKTTSLYAALARLDA-STSNILTVEDPVEYDLPG----ISQIQVNSKIDMTFALALRAIL 305 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 R+DPD+I++GE+RD ET ++A+ A+ TGHLVLATLHT + A+ RLVD +P Sbjct: 306 RQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDSVSAINRLVD----MGVEPF- 360 Query: 251 NQLAGSLRAVLSQKL---------------------------EVDKQEGRVALFELLINT 283 LA SL VL+Q+L GR + EL Sbjct: 361 -LLASSLLGVLAQRLVRRLCPQCRQPDPTASGCWRPQGCERCSGTGYSGRTGIHELFCID 419 Query: 284 PAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 V +LI +G Q ++ + GM++ ++ Q V +G Sbjct: 420 DEVRSLIHQGADMQ--ALMGAARNAGMVSMREDGQRWVRDG 458 >UniRef50_C0GQP1 Type II secretion system protein E n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQP1_9DELT Length = 563 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/169 (45%), Positives = 107/169 (63%), Gaps = 12/169 (7%) Query: 78 LRGSAFAQRHGISLALRLL--PSHCPQLEQLGAP----TVLPELLKSENGLILVTGATGS 131 +R S +G S+ +R+L S LEQLG P + EL+ S +G+ILVTG TGS Sbjct: 267 IRVSCLPTVYGESVVMRILDRSSASFTLEQLGFPGREYQLFQELIHSPHGIILVTGPTGS 326 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEY-LYASQRCLIQQREIGLHCMTFASGLRAAL 190 GK+TTL A + +N I+T+EDPVEY L + + R + ++FA GLR+ + Sbjct: 327 GKTTTLYAALNAINS-IQKKIITVEDPVEYELEGINQVHVNPR----YGLSFADGLRSIV 381 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 R+DPDVIL+GE+RD ET +A+ +A TGHLV +TLHT AA AV RL++ Sbjct: 382 RQDPDVILIGEIRDRETADIAIQSALTGHLVFSTLHTNDAAGAVARLME 430 >UniRef50_B7APV7 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B7APV7_9BACE Length = 566 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 108/354 (30%), Positives = 166/354 (46%), Gaps = 78/354 (22%) Query: 17 DLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQ 76 D L A AR +I M+ + P D + I+++N + D Sbjct: 229 DKSLLGAITARLKIMSGMDISEKRKPQ----------DGRITIIVDNREYD--------- 269 Query: 77 RLRGSAFAQRHGISLALRLLPSHC--PQLEQLG-APTVL---PELLKSENGLILVTGATG 130 +R S +G + +RL Q LG PT L +LK+ +G+ILVTG TG Sbjct: 270 -IRVSNLPTVYGEKVVMRLASKEGFKKQKSDLGLTPTDLVKFDNILKNPHGIILVTGPTG 328 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGKSTTL + LN + +I+T+EDPVE A+ + Q + MTFA+ LR+ L Sbjct: 329 SGKSTTLYTALSSLNSE-EVNIITVEDPVE---ANIDGINQVQVNNKADMTFANALRSIL 384 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 R+DPD+I++GE+RDSET +A+ A+ TGHLV++TLHT A ++ RL D +P Sbjct: 385 RQDPDIIMIGEIRDSETAEIAVRASITGHLVVSTLHTNSTANSISRLAD----MGVEPY- 439 Query: 251 NQLAGSLRAVLSQK---------------------LEVDKQE------------------ 271 +A SL +++Q+ L VD E Sbjct: 440 -LIADSLVGIIAQRLVRRLCECKKPRLATAEEKEELAVDPSEDIVLYEPCGCKMCDNTGY 498 Query: 272 -GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 GR+ ++E++ TP + ++I GK+ + + + GM T + S V +G Sbjct: 499 KGRIGIYEIMTITPKIKSMIARGKSAD--EIKEQAIEEGMSTLKASAAKYVLDG 550 >UniRef50_UPI00016B268C type II secretion system protein E n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B268C Length = 586 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 94/254 (37%), Positives = 142/254 (55%), Gaps = 25/254 (9%) Query: 3 MEEIVALSVKHNVSDLH---LCSAWPARWRIRGRMEAAPFDTPDVE-------ELLREWL 52 + I+ +VK + SD+H L A R R+ G + +E ++L Sbjct: 183 LSTILEYAVKSHASDVHIEPLEKALKIRCRVDGVLREIMQLPKSIEPALVSRIKILSNLK 242 Query: 53 DDDQRAILLENGQLDFAVSLAENQ-RLRGSAFAQRHGISLALRLLPSHCP--QLEQLG-- 107 D+ R + ++GQ FAV++A + LR + G + +RLL LE +G Sbjct: 243 IDEHR--IPQDGQ--FAVNVAGKEVDLRIAISPVVWGEQVVVRLLDKSGSSFNLEDMGYA 298 Query: 108 --APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 A + + +K NG+IL +G TGSGKST+L A++ + ++ +I+TLEDPVEY Sbjct: 299 GRALRTIRKGIKRPNGMILTSGPTGSGKSTSLYALIKEI-KNDTVNIVTLEDPVEYKMDG 357 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 + E+GL TFASGLR+ LR+DPD++++GE+RD+ET LA+ AA TGHLV +TL Sbjct: 358 VNQIQVNAEVGL---TFASGLRSILRQDPDIVMVGEIRDNETANLAIQAALTGHLVFSTL 414 Query: 226 HTRGAAQAVERLVD 239 HT AA + RL+D Sbjct: 415 HTNSAAGVLPRLLD 428 >UniRef50_C4L4L3 Type II secretion system protein E n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L4L3_EXISA Length = 556 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 83/244 (34%), Positives = 131/244 (53%), Gaps = 19/244 (7%) Query: 10 SVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQRAILL 61 ++ SD+H R+RI G + ++ ++ L D + L Sbjct: 182 AIDQRASDIHFDPHEKQLHVRFRIDGDLRTETVYPKKIQSVMLTRLKVMSNLDITESRLP 241 Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLG----APTVLPEL 115 ++G++ + + R S +G + +R+L S L +LG ++ Sbjct: 242 QDGRIKYTLR-NRAYDFRVSTLPTMYGEKIVIRVLDSSQGLTDLTKLGFGERNEQAYRDM 300 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 LK NG+IL+TG TGSGKS+TL A + LN +I+T+EDPVEY + ++ Sbjct: 301 LKRPNGIILITGPTGSGKSSTLYASLKELNDET-KNIITVEDPVEYQLDGINQVQVNSKV 359 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 GL TFASGLR+ LR+DP+++++GE+RD+ET +A+ A+ TGHLVL+TLHT A ++ Sbjct: 360 GL---TFASGLRSILRQDPNIVMVGEIRDTETAEIAIRASLTGHLVLSTLHTNSAISSIT 416 Query: 236 RLVD 239 RLVD Sbjct: 417 RLVD 420 >UniRef50_UPI0001BC5ABC type IV-A pilus assembly ATPase PilB n=2 Tax=Fusobacterium RepID=UPI0001BC5ABC Length = 491 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 130/218 (59%), Gaps = 26/218 (11%) Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPT- 110 D +++++ ++DF VS+ N +G L +R+L + + LE LG T Sbjct: 190 DGSFSLMIQKRKIDFRVSILPNI----------YGEKLVIRILDRNNSKFDLENLGFLTG 239 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 ++ ++L S G+IL G TGSGK+TTL + + Y N+ D +++T+EDPVEY Sbjct: 240 QLNMIRKVLSSSAGIILNCGPTGSGKTTTLYSFLEYKNKE-DTNMVTIEDPVEYHLDGIT 298 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + EIGL+ F++ L++ LR+DPD+I++GE+RDSET LA+ AA TGHLV +++H Sbjct: 299 QITCKEEIGLN---FSTILKSLLRQDPDIIMIGEIRDSETAELAIKAALTGHLVFSSIHA 355 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 + + Q ++RL + + P +A SL +LSQ+L Sbjct: 356 KDSIQCIDRLCNLGIS----PFL--IANSLLMILSQRL 387 >UniRef50_B0S8Q3 Type II secretory pathway ATPase, protein E n=7 Tax=Leptospira RepID=B0S8Q3_LEPBA Length = 558 Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/128 (51%), Positives = 88/128 (68%), Gaps = 4/128 (3%) Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 EL+ G+ILVTG TGSGKSTTL + + +N + +I+T EDPVEY + Sbjct: 304 FKELIYKPYGIILVTGPTGSGKSTTLYSALSEINTE-ERNIITCEDPVEYQMDGISQMQM 362 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 +IGL TFA+GLR+ LR+DPDV+++GE+RD ET R+A+ A+ TGHLV +TLHT A+ Sbjct: 363 NDKIGL---TFAAGLRSILRQDPDVVMVGEIRDEETARIAIQASLTGHLVFSTLHTNDAS 419 Query: 232 QAVERLVD 239 AV RLVD Sbjct: 420 SAVTRLVD 427 >UniRef50_A8MGF8 Type II secretion system protein E n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGF8_ALKOO Length = 560 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 29/256 (11%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLE 62 + I+ +VK SD+H+ + R+R R++ D ++ L + + I + Sbjct: 183 LNSIIEQAVKERASDIHI-EPYAEDIRVRFRIDG---DLREIMTLAKNSMSGIVTRIKI- 237 Query: 63 NGQLDFA---------VSLAENQR---LRGSAFAQRHGISLALRLLPSHCPQLEQ--LGA 108 G+++ A V N R +R S +G + +RLL + + LG Sbjct: 238 IGKMNIAEKRIPQDGRVETKINGRDIDMRISTLPTVYGEKIVIRLLDRSNFKFTKDALGF 297 Query: 109 P----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 + ++L G++LVTG TGSGK+TTL ++ LNQ + +++T+EDPVEY Sbjct: 298 SQKDLNLFNQILAQPYGMVLVTGPTGSGKTTTLYTILQELNQ-IEKNVVTIEDPVEYKLK 356 Query: 165 SQRCLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLA 223 I Q ++ + +TFASGLR+ LR+DPD++++GE+RDSET +++ AA TGHLVL+ Sbjct: 357 G----INQMQVNIKAGLTFASGLRSVLRQDPDIVMVGEIRDSETAEISIRAAITGHLVLS 412 Query: 224 TLHTRGAAQAVERLVD 239 TLHT + V RL+D Sbjct: 413 TLHTNDSPSTVSRLID 428 >UniRef50_A4J3A4 Type II secretion system protein E n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3A4_DESRM Length = 554 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 26/252 (10%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRGR--------MEAAP-FDTPDVEEL-LREWLDD 54 +I+ ++ SD+H+ R RIR R ME AP D + + + L+ Sbjct: 174 QIIDRAIDQGASDIHI-EPQEKRVRIRYRIDGMLILGMELAPTLDKAIISRIKIMSQLNI 232 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL-PSHCP--QLEQLGAPTV 111 ++ + ++G++ + + N LR S +G +R+L P QL QLG Sbjct: 233 AEKRVP-QDGRIQYG-KQSRNFDLRVSTMPTVYGEKAVIRILNPESIKKYQLAQLGFSAY 290 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + L++ +G++L+TG TG GK+TTL A++ LN D + T+EDPVEY Sbjct: 291 NLKSFQKCLRATSGMVLITGPTGCGKTTTLYAILNELNLE-DRNFSTIEDPVEYRLEG-- 347 Query: 168 CLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 I Q ++ MTFA GLRA LR+DPD+I++GE+RD ET +A+TAA TGHLV +TLH Sbjct: 348 --INQTQVNTKTGMTFAVGLRALLRQDPDIIMVGEIRDRETAEIAVTAAGTGHLVFSTLH 405 Query: 227 TRGAAQAVERLV 238 T A A++RL+ Sbjct: 406 TNDALGALDRLI 417 >UniRef50_B9XRT3 Type II secretion system protein E n=2 Tax=Verrucomicrobia RepID=B9XRT3_9BACT Length = 580 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 91/250 (36%), Positives = 141/250 (56%), Gaps = 23/250 (9%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD-TPDVEEL---------LREWLDDD 55 I+ ++K SD+H+ + R+R R++ A D TP +++ + LD Sbjct: 204 ILVQAIKDRASDIHI-EPFEKVIRLRYRVDGALLDVTPPPKQMQLALASRLKIMSSLDIA 262 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLG-APTVL 112 +R L ++G++ VS ++ LR S HG LR+L L++LG P Sbjct: 263 ERR-LPQDGRMRVKVS-GKDYDLRVSFLPTVHGEKCVLRVLDKSNLSASLDKLGLDPDTF 320 Query: 113 PEL---LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 + + S +GLILVTG TGSGK+TTL + + LN +I+T+EDPVE+ + Sbjct: 321 QQFKAAVDSPHGLILVTGPTGSGKTTTLYSALNELNSPV-YNIVTVEDPVEFQLPGINQV 379 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 ++EIGL TFA+ LR+ LR+DPD++++GE+RD+ET +A+ AA TGH VL+T+H Sbjct: 380 PVKKEIGL---TFANALRSILRQDPDIVMIGEIRDTETAEIAVEAALTGHQVLSTMHCND 436 Query: 230 AAQAVERLVD 239 A A+ RL D Sbjct: 437 APGAIVRLDD 446 >UniRef50_B8FQB2 Type II secretion system protein E n=4 Tax=Clostridiales RepID=B8FQB2_DESHD Length = 573 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 81/194 (41%), Positives = 116/194 (59%), Gaps = 16/194 (8%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQLEQ--LGAP----TVLPELLKSENGLILVTGATGS 131 LR S +G + LR+L LE+ LG + EL+ G++LVTG TGS Sbjct: 277 LRVSTAPTMYGEKVVLRILDKGSVILEKASLGLQGHNLELFDELIAKPYGIVLVTGPTGS 336 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTL + LN + +I+TLEDPVEY + + + GL TFA GLR+ LR Sbjct: 337 GKTTTLYTALNQLNT-PEKNIITLEDPVEYNFKGVNQMQVNPKAGL---TFAKGLRSILR 392 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 +DPD+I++GE+RD+ET +A+ +A TGHLVL+T+HT A AV RLVD E +P Sbjct: 393 QDPDIIMVGEMRDNETAEIAVRSALTGHLVLSTIHTNDAPSAVTRLVD----MEIEPF-- 446 Query: 252 QLAGSLRAVLSQKL 265 ++ S+ ++SQ+L Sbjct: 447 LISASVVGIISQRL 460 >UniRef50_B5Y9C5 General secretion pathway protein E n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9C5_COPPD Length = 536 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 127/218 (58%), Gaps = 19/218 (8%) Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 E+++ G+++ TG TGSGK+TTL A++ + + D +I+T+EDPVEY + I Q Sbjct: 315 EMIRKPYGIVVTTGPTGSGKTTTLYALLKEIYETRDKNIITIEDPVEYDFEG----ITQI 370 Query: 174 EIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQ 232 +I +TF+ LR+ALR+DPDVIL+GE+RD ET++ A+ AA +GHLVL+TLH A Sbjct: 371 QINPKAEITFSGTLRSALRQDPDVILVGEIRDEETMKTAIDAALSGHLVLSTLHANNALA 430 Query: 233 AVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL------EVDKQEGRVALFELLINTPAV 286 AV R F + DP+ +A +L V++Q+L + GR+ +FE+L + Sbjct: 431 AVAR----FMSMGADPML--VASALNCVMAQRLVRVWDAVSETYRGRLGIFEILPMDDEL 484 Query: 287 GNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 +I + + ++ G +T ++ + RV +G Sbjct: 485 RKMI--SSRADIVDLTNAARRKGFMTMEEIAKIRVDQG 520 >UniRef50_Q2LUW6 General secretion pathway protein E n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUW6_SYNAS Length = 558 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 93/248 (37%), Positives = 138/248 (55%), Gaps = 27/248 (10%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFA 69 +V+ SD+H+ S+ ++R+R R++ D +EE +L R LL +LD A Sbjct: 181 AVEMRASDIHIESS-EKKYRVRFRIDGILHDIDTLEEAF--YLATVSRIKLL--AELDIA 235 Query: 70 VS-LAENQR-----------LRGSAFAQRHGISLALRLLPSH--CPQLEQLGA----PTV 111 L ++ + +R S +G + LRLL L+ LG V Sbjct: 236 EKRLPQDGKFTTRIASLFLDIRVSTLPTINGEGVVLRLLYREKVSLDLDYLGLDADHKAV 295 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 EL+ G+ILVTG TGSGKSTTL +M+ LN H D I+T+EDPVEY + Sbjct: 296 AVELISHPYGMILVTGPTGSGKSTTLYSMLTRLN-HPDRKIITIEDPVEYQLQGINQIQV 354 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 + EIGL TFA+ LR+ LR DPD++++GE+RD ET +++ +A TGHLVL+TLHT + Sbjct: 355 RGEIGL---TFAAALRSILRHDPDIVMVGEIRDRETAEISIQSALTGHLVLSTLHTNDSP 411 Query: 232 QAVERLVD 239 ++ RL++ Sbjct: 412 SSLFRLIE 419 >UniRef50_A6GM82 Type II secretion system protein E:General secretory system II, protein E, N-terminal n=1 Tax=Limnobacter sp. MED105 RepID=A6GM82_9BURK Length = 331 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 90/246 (36%), Positives = 127/246 (51%), Gaps = 12/246 (4%) Query: 2 NMEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRA 58 N++ +A + N SD+HL + R R+ G++ D L + + + Sbjct: 12 NIDNTIAYASAVNASDIHLTPNPMNFSVRLRVNGKLSPVRDIPSDTGRSLVQAFKAESKM 71 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ-LEQLG----APTVLP 113 + E + A N LR + HG +L +RLL +H L QLG A + Sbjct: 72 NIAETRRPQDARLSRNNIDLRLATHPSLHGENLVIRLLNTHSRMPLNQLGLSQAALVHIE 131 Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 +LL ENGL LV GATGSGK+TTL AM+ +L A I TLEDPVE + +Q Sbjct: 132 QLLAHENGLTLVAGATGSGKTTTLHAMLNHLGASA-GRIATLEDPVEIINPEA---VQTD 187 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 L + FASGLR+ +R+DPD IL+GE+RD ET L L AA TGH + A++H A Sbjct: 188 LSRLPHLNFASGLRSLMRQDPDTILVGEVRDEETAELTLNAALTGHRLFASVHAPDCLGA 247 Query: 234 VERLVD 239 + R+ + Sbjct: 248 INRITE 253 >UniRef50_Q00512 General secretion pathway protein E n=10 Tax=Proteobacteria RepID=GSPE_PSEAE Length = 502 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 104/285 (36%), Positives = 153/285 (53%), Gaps = 47/285 (16%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR--AILLEN 63 I+ +++ N SD+HL + R +R R V+ +LRE L+ + A+L+ Sbjct: 129 ILGEAIRENASDIHL-ETFEKRLVVRFR----------VDGVLREVLEPKRELAALLVSR 177 Query: 64 ----GQLDFA---------VSLAENQR---LRGSAFAQRHGISLALRLLPSHCPQL--EQ 105 +LD A +SL R +R S +G + LRLL +L + Sbjct: 178 IKVMARLDIAEKRIPQDGRISLRVGGREVDIRVSTLPSANGERVVLRLLDKQAGRLNLQH 237 Query: 106 LGAP----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEY 161 LG ++ E ++ +G++LVTG TGSGK+TTL A + LN +ILT+EDP+EY Sbjct: 238 LGMSERDRKLMDETVRKPHGILLVTGPTGSGKTTTLYASLTTLNDRT-RNILTVEDPIEY 296 Query: 162 LYASQRCLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHL 220 I Q ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHL Sbjct: 297 HLEG----IGQTQVNAKVDMTFARGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHL 352 Query: 221 VLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 VL+TLHT A A+ RLVD +P L+ S+ VL+Q+L Sbjct: 353 VLSTLHTNSAIGAITRLVD----MGIEPF--LLSSSMLGVLAQRL 391 >UniRef50_C8X3E6 Type II secretion system protein E n=2 Tax=Desulfovibrionales RepID=C8X3E6_DESRD Length = 785 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 83/180 (46%), Positives = 108/180 (60%), Gaps = 15/180 (8%) Query: 91 LALRLLPSHCP-QLEQLGAPTVLPELLKS----ENGLILVTGATGSGKSTTLAAMVGYLN 145 + +R+L S P LEQLG + + E K GL+LV G TGSGK+TTL + V Y+N Sbjct: 493 VVMRVLSSGKPLPLEQLGLHSGVLEAFKRMVYRPYGLLLVVGPTGSGKTTTLHSAVSYIN 552 Query: 146 QHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDS 205 +D I T EDPVE R L Q +IGL TFA+ LR+ LR DPDVI++GE+RD Sbjct: 553 S-SDRKIWTAEDPVEITQTGLRQLQVQPKIGL---TFAAALRSFLRADPDVIMIGEMRDE 608 Query: 206 ETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 ET + + A+ TGHLV +TLHT A + + RL+D E DP A SL VL+Q+L Sbjct: 609 ETAHIGVEASLTGHLVFSTLHTNSAPETITRLLD----MELDPF--NFADSLLCVLAQRL 662 >UniRef50_P25953 ComG operon protein 1 n=34 Tax=Bacillaceae RepID=COMGA_BACSU Length = 356 Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/184 (40%), Positives = 114/184 (61%), Gaps = 11/184 (5%) Query: 62 ENGQLDFAVSLAE-NQRLRGSAFAQRHGISLALRLLPSH-CPQLEQLG----APTVLPEL 115 +NG L + L E N LR S + SL +R++P + P +++L L Sbjct: 75 QNGSL--TLKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSF 132 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 LK +G+++ TG TGSGK+TTL ++V Y +H + +I+TLEDPVE ++Q + Sbjct: 133 LKHSHGMLIFTGPTGSGKTTTLYSLVQYAKKHFNRNIVTLEDPVE---TRDEDVLQVQVN 189 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 +T+++GL+A LR DPD+I+LGE+RD+ET +A+ AA TGHLVL +LHTR A A+ Sbjct: 190 EKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLHTRDAKGAIY 249 Query: 236 RLVD 239 RL++ Sbjct: 250 RLLE 253 >UniRef50_B4D852 Type II secretion system protein E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D852_9BACT Length = 569 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 82/195 (42%), Positives = 117/195 (60%), Gaps = 17/195 (8%) Query: 78 LRGSAFAQRHGISLALRLLP---SHCPQLEQLGAP----TVLPELLKSENGLILVTGATG 130 +R S +G S++LRLL S L++LG ++ LL+ NG+ILVTG TG Sbjct: 266 VRVSTIPTVNGESISLRLLSRNESLSFALDRLGMSDAQMKMIRALLQEPNGIILVTGPTG 325 Query: 131 SGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAAL 190 SGKST+L + +N I+T+E+PVEY A + + EIGL TFA+GLRA L Sbjct: 326 SGKSTSLYCFLSSINA-VSRRIITIEEPVEYRLAGVSQIEVKSEIGL---TFANGLRAIL 381 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 R+DP+++++GE+RD ET +A+ AA TGHLV +TLHT A + RL+D +P Sbjct: 382 RQDPNIVMVGEIRDFETAEIAIRAAMTGHLVFSTLHTNDAVSGITRLLD----MGIEPF- 436 Query: 251 NQLAGSLRAVLSQKL 265 LA +R L+Q+L Sbjct: 437 -LLASVVRCFLAQRL 450 >UniRef50_B1YJT8 Type II secretion system protein E n=5 Tax=Bacillales RepID=B1YJT8_EXIS2 Length = 554 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 37/260 (14%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELL----------- 48 + +I+ + SD+H+ ++ R RI G + ++ +L Sbjct: 177 VNQILENGISQRASDIHMDPQETSLSIRIRIDGELRTENNYPKQIQNILTTRIKVMSELD 236 Query: 49 --REWLDDDQRAILLENG-QLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE- 104 L D R L NG DF R S +G + +R+L S + Sbjct: 237 ITESRLPQDGRIKFLHNGVAYDF----------RVSTLPTVYGEKVVIRILDSSNSNISI 286 Query: 105 -QLGAPT----VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPV 159 ++G E+LK NG+IL+TG TGSGKS+TL A + LN +I+T+EDPV Sbjct: 287 AKIGFSERNEQQFREMLKRPNGIILITGPTGSGKSSTLYAALNELNDET-RNIITVEDPV 345 Query: 160 EYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGH 219 EY + +IGL TFASGLR+ LR+DP+V+++GE+RD ET +++ A+ TGH Sbjct: 346 EYQVDGINQVQVNSKIGL---TFASGLRSILRQDPNVVMVGEIRDIETAEISIRASLTGH 402 Query: 220 LVLATLHTRGAAQAVERLVD 239 LVL+TLHT A ++ RL+D Sbjct: 403 LVLSTLHTNSAVSSITRLID 422 >UniRef50_B9XM22 Type II secretion system protein E n=1 Tax=bacterium Ellin514 RepID=B9XM22_9BACT Length = 583 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 101/285 (35%), Positives = 153/285 (53%), Gaps = 39/285 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLE 62 + +I+ + K +D+H + RIR R++ TP +L R +A L+ Sbjct: 184 VNQIIWEAFKDRATDIHFEPS-EDELRIRYRIDGILHQTPMPPQLKR------YQAALIS 236 Query: 63 NGQLDFAVSLAE---------NQRLRGSAFAQR-------HGISLALRLLP--SHCPQLE 104 ++ +++AE N R++G R +G S++LRLL LE Sbjct: 237 RIKVMSGMNIAEKRLPQDGRINVRIKGEEIDIRVSTVPTVYGESVSLRLLTRGKIFLGLE 296 Query: 105 QLG-AP---TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE 160 +LG AP T + E++ +G+ LVTG TGSGKST+L A + +N I+T+E+PVE Sbjct: 297 KLGFAPVEETAIREIILKPHGIFLVTGPTGSGKSTSLYAFLSTINS-VSKRIITIEEPVE 355 Query: 161 YLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHL 220 Y + + +IGL TFA GLR LR+DP+VI++GE+RD ET +A+ AA TGHL Sbjct: 356 YELKGINQIAVRSDIGL---TFAMGLRHILRQDPNVIMVGEIRDLETAEIAIRAALTGHL 412 Query: 221 VLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 V +TLHT A A RL+D +P +A S+ AV++Q+L Sbjct: 413 VFSTLHTNDAPSAFTRLID----MGIEPF--LVASSVEAVMAQRL 451 >UniRef50_Q5NX46 Predicted GSPII_E, Type II/IV secretion system protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX46_AZOSE Length = 480 Score = 123 bits (309), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 17/194 (8%) Query: 78 LRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTVLPE----LLKSENGLILVTGATGS 131 +R S G S+ RLL + L +L P + E +L+ +GL +VTG TGS Sbjct: 106 IRVSIVPTVDGQSVVCRLLDQANVSMDLTELALPPAVDEAMRVILQEPHGLFVVTGPTGS 165 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTL A+V +N H+ +I+T+E+PVEY A + Q I M + + LRA LR Sbjct: 166 GKTTTLYALVNEINDHS-LNIITIENPVEYRLAG----LNQINIDPIHMPYPAALRAVLR 220 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRN 251 +DPDVI++GE+RD+ET R+A+ AA TGHLV+A++H AA RL++ DP Sbjct: 221 QDPDVIMIGEIRDAETARIAVEAANTGHLVIASMHANNAAMGCTRLIE----LGVDP--G 274 Query: 252 QLAGSLRAVLSQKL 265 LA SLR + +Q+L Sbjct: 275 TLAASLRGITAQRL 288 >UniRef50_Q0AZI9 Type II secretion system protein E n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZI9_SYNWW Length = 417 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 117/195 (60%), Gaps = 18/195 (9%) Query: 78 LRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTV----LPELLKSENGLILVTGATGS 131 R S G LALR+L + ++ QLG + L L G++LVTG +GS Sbjct: 119 FRTSTLPTAWGEKLALRILDRANALTEIRQLGFSSNNQANLLALSHCSQGMVLVTGPSGS 178 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC-MTFASGLRAAL 190 GK+TTL +++ +N + +I+TLEDPVEY + Q +I +TFASGLRA L Sbjct: 179 GKTTTLYSILTQIN-SIEKNIITLEDPVEYTLPG----VNQVQINPKAGLTFASGLRAIL 233 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 R+DPDVI++GE+RD ET RLA+ AA TGHLV +TLHT AA ++ RL D +D + Sbjct: 234 RQDPDVIMVGEIRDRETARLAVQAALTGHLVFSTLHTNSAAGSITRLRD---MGIEDFL- 289 Query: 251 NQLAGSLRAVLSQKL 265 LA SL V+SQ+L Sbjct: 290 --LASSLAGVVSQRL 302 >UniRef50_B4U620 Type II secretion system protein E n=3 Tax=Aquificaceae RepID=B4U620_HYDS0 Length = 482 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 11/179 (6%) Query: 68 FAVSLAENQ-RLRGSAFAQRHGISLALRLLP-SHCP-QLEQLG----APTVLPELLKSEN 120 F + +++ + +R S G + LR+L S+ P LE++G A + ++L Sbjct: 176 FRIKISKKEIDIRVSTIPSLFGERVVLRILDQSNTPLDLEEIGLSKEAYEDILDILSRPY 235 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 G+ILVTG TGSGKST+L A + L + +I+T+EDPVEY + ++GL Sbjct: 236 GIILVTGPTGSGKSTSLYAFLKRL-KSPSKNIITIEDPVEYQVEGISQIQVNPKVGL--- 291 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 TFASGLR+ LR+DPD+I++GE+RD ET +A+ AA TGHLVL+TLHT+ A +V RL D Sbjct: 292 TFASGLRSILRQDPDIIMIGEIRDRETAEIAIQAALTGHLVLSTLHTQNALSSVTRLFD 350 >UniRef50_D2R471 Type II secretion system protein E n=6 Tax=Planctomycetaceae RepID=D2R471_9PLAN Length = 573 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/195 (42%), Positives = 111/195 (56%), Gaps = 18/195 (9%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQL--EQLGAP----TVLPELLKSENGLILVTGATGS 131 LR S HG S+ +RLL ++ QLG + L+K NG++LVTG TGS Sbjct: 270 LRVSIIPTNHGQSVVMRLLDKDNIKVGVRQLGFSEDMFSTFQSLIKRPNGIVLVTGPTGS 329 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTL A + +N+ D I+T EDPVEY + + IGL FA +RA LR Sbjct: 330 GKTTTLYAALNSMNR-PDKKIITAEDPVEYYLPGVNQVEVRHSIGLD---FARIIRAMLR 385 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD-SFPAQEKDPVR 250 + P+VIL+GE+RDSET + + A+ TGHLV +TLHT A AV R+ D P Sbjct: 386 QAPNVILVGEMRDSETASMGIQASLTGHLVFSTLHTNDAPSAVTRMTDMGVPGY------ 439 Query: 251 NQLAGSLRAVLSQKL 265 +A S+ AVL+Q+L Sbjct: 440 -LVASSVIAVLAQRL 453 >UniRef50_C8WIR5 Type II secretion system protein E n=2 Tax=Bacteria RepID=C8WIR5_EGGLE Length = 568 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 70/152 (46%), Positives = 100/152 (65%), Gaps = 12/152 (7%) Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L+ S NG++L+ G TGSGKS+T+ M+ LN + +++TLEDPVEY + Q + Sbjct: 314 LIGSNNGMVLIVGPTGSGKSSTMYTMIRQLNTDS-VNLVTLEDPVEYNIDG----VNQVQ 368 Query: 175 IGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 I MTFASGLRA LR+DPD++ +GE+RD ET +A+ AA TGHLVL+T+HT AA Sbjct: 369 INEKTGMTFASGLRAILRQDPDIVAVGEIRDGETAEIAMRAAITGHLVLSTVHTYDAAST 428 Query: 234 VERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 ++RL+D +P +A +R V+SQ+L Sbjct: 429 IDRLIDIG----VEPY--LIASGVRGVISQRL 454 >UniRef50_Q1Q110 Strongly similar to general secretory system type II protein, ATPase component n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q110_9BACT Length = 571 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/335 (31%), Positives = 164/335 (48%), Gaps = 54/335 (16%) Query: 6 IVALSVKHNVSDLH---LCSAWPARWRIRG---RMEAAPFDTPD-----VEELLREWLDD 54 I+ ++ SD+H L S R+RI G E P + D ++ L + + Sbjct: 194 IINKAIVARASDIHVEPLLSKLRIRYRIDGVCQEAEVLPKNLQDSIISRIKILADMDISE 253 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH----CPQLEQLGAPT 110 +R ++G++ +S ++ +R S +G S+ +RLL C ++ LG T Sbjct: 254 KRRP---QDGRISLYLS-GKDMDIRVSCLPSIYGESIVMRLLEKSQTLMC--IKNLGLCT 307 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 ++K NG+ L+TG TGSGK+TTL A++ LNQ I+T EDPVEY Sbjct: 308 SDFQRFQSIIKMPNGIFLITGPTGSGKTTTLYAIINELNQTG-VKIVTAEDPVEYTIKGV 366 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 +IG TF LR LR+DP+VIL+GE+RD+ET +A+ +A TGHLVL+TLH Sbjct: 367 NQSEVHDKIGF---TFPKILRTMLRQDPNVILVGEIRDTETADIAIASALTGHLVLSTLH 423 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAV 286 T A A+ RL+D P ++ SL+ +++Q+L A+ Sbjct: 424 TNDAPSAITRLID----MNIKPF--LVSTSLQGIMAQRL-----------------VRAI 460 Query: 287 GNLIREGKTHQLP-HVIQTGQQVGMITFQQSYQHR 320 + RE +TH P + Q G GM T Y+ + Sbjct: 461 CHDCRE-QTHYTPEQITQMGFDPGMFTEYYFYKGK 494 >UniRef50_A8URM8 Putative uncharacterized protein n=3 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URM8_9AQUI Length = 552 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 12/175 (6%) Query: 72 LAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTVL----PELLKSENGLILV 125 L E+ +R S +G ++ +RLLP + L+ LG + E++ G+ILV Sbjct: 245 LGESYDVRASTLPTAYGENVVMRLLPKNLSLFNLKNLGFEEDILQEFEEVISKPYGMILV 304 Query: 126 TGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC-MTFAS 184 TG TGSGK+TTL A + +N +ILT+EDP+EY + I+Q ++ TFA Sbjct: 305 TGPTGSGKTTTLYASLRRINS-LRKNILTVEDPIEYRFP----FIKQTQVNEKAGYTFAK 359 Query: 185 GLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +R LR+DPDVIL+GE+RD ET +A+ AA TGHLVL+TLHT A + RL+D Sbjct: 360 AVRHFLRQDPDVILVGEIRDEETAEMAVRAAITGHLVLSTLHTNDAVSTIPRLID 414 >UniRef50_Q1D9E1 General secretory pathway protein E n=17 Tax=Proteobacteria RepID=Q1D9E1_MYXXD Length = 605 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/151 (49%), Positives = 100/151 (66%), Gaps = 10/151 (6%) Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 ++K +G+ILVTG TGSGK+TTL + +N D +ILT+EDPVEY + + Sbjct: 346 VIKRSHGIILVTGPTGSGKTTTLYGALSKINT-PDLNILTVEDPVEYQLKGIGQMAISPK 404 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 IGL TFA GLR+ LR+DPDVI++GE+RD ET +A+ A+ TGHLVL+T+HT AA AV Sbjct: 405 IGL---TFAQGLRSFLRQDPDVIMVGEIRDKETAEIAIQASLTGHLVLSTVHTNDAAGAV 461 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 RLVD +P +A SL +L+Q+L Sbjct: 462 TRLVD----MGVEPF--LVASSLTGILAQRL 486 >UniRef50_P31703 General secretion pathway protein E n=26 Tax=Proteobacteria RepID=GSPE_PECCC Length = 498 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 118/195 (60%), Gaps = 18/195 (9%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQL--EQLGAP----TVLPELLKSENGLILVTGATGS 131 +R S +G + LRLL + +L E LG +L L+ +G+ILVTG TGS Sbjct: 206 VRVSTLPSNYGERVVLRLLDKNSVKLDLELLGMSERNRQLLDSLIHRPHGIILVTGPTGS 265 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC-MTFASGLRAAL 190 GKSTTL A + LN ++ +I+T+EDP+EY I Q ++ MTFA GLRA L Sbjct: 266 GKSTTLYAALSRLNA-SERNIMTVEDPIEYELEG----IGQTQVNTKVDMTFARGLRAIL 320 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 R+DPDV+L+GE+RD ET ++A+ A+ TGHLVL+TLHT A A+ RL D +P Sbjct: 321 RQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQD----MGVEPF- 375 Query: 251 NQLAGSLRAVLSQKL 265 L+ SL VL+Q+L Sbjct: 376 -LLSTSLLGVLAQRL 389 >UniRef50_B1HSP4 ComG operon protein 1 n=2 Tax=Bacillaceae RepID=B1HSP4_LYSSC Length = 339 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 127/218 (58%), Gaps = 14/218 (6%) Query: 90 SLALRLL-PSHCPQLEQLG----APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYL 144 SL +RLL +H L L + L EL+++ GL+ TGATGSGKST+L +++ Y Sbjct: 107 SLIIRLLLQNHSFPLTSLSFFKSSAYKLMELVQNRQGLLFFTGATGSGKSTSLYSLIHYC 166 Query: 145 NQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRD 204 + + H ++LEDPVE +Q L+Q + +T+ASGL+A LR PDVI++GE+RD Sbjct: 167 STELNRHAISLEDPVE---NNQANLLQIQVNERAGVTYASGLKAILRHSPDVIMIGEIRD 223 Query: 205 SETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQK 264 ET ++A+ A+ TGHLV++T+H + + + RL+D D +R + G + VL Q Sbjct: 224 KETAKVAIEASLTGHLVVSTIHAKDSLSCLYRLMD--LGVSIDEIRQTVIGIVAQVLFQ- 280 Query: 265 LEVDKQEGRVALFELL--INTPAVGNLIREGKTHQLPH 300 D Q+ R AL+E+L ++ I+ +LPH Sbjct: 281 -SSDLQDERRALYEILSDVHLNQAITAIQNKGNFRLPH 317 >UniRef50_C6CY56 Type II secretion system protein E n=3 Tax=Bacillales RepID=C6CY56_PAESJ Length = 554 Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/168 (41%), Positives = 107/168 (63%), Gaps = 10/168 (5%) Query: 78 LRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT----VLPELLKSENGLILVTGATGS 131 +R ++ HG + LRLL + ++QLG V E+++ G++L+TG TGS Sbjct: 259 IRVASLPTIHGEKIVLRLLDLSTGVKAVDQLGFNNHNVQVFKEMIERPYGILLITGPTGS 318 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTL + + +LN+ D +I+T+EDPVEY + IGL TFA+GLR+ LR Sbjct: 319 GKTTTLYSALSHLNEE-DTNIITVEDPVEYQLDGINQVQVNPAIGL---TFATGLRSILR 374 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +DP+V+++GE+RD+ET +A+ A+ TGHLVL+TLHT + ++ R D Sbjct: 375 QDPNVVMVGEIRDTETAEIAIRASLTGHLVLSTLHTNDSVSSITRFRD 422 >UniRef50_Q988B0 General secretion protein E n=1 Tax=Mesorhizobium loti RepID=Q988B0_RHILO Length = 502 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 46/265 (17%) Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLG----APTVLP 113 L ++G++ AV + LR S HG ++ LR+L +L E+LG A + Sbjct: 207 LPQDGRMRIAVR-GRDVDLRVSVIPSIHGEAIVLRILDRAGVELKLEKLGFDGAAQAKIR 265 Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 + +S NG++L+TG TGSGK+TTL +++ D I T+EDPVEY A L Sbjct: 266 NMSQSANGIVLITGPTGSGKTTTLYSILAE-RSRPDVKIFTVEDPVEYRMAGITQLQVNP 324 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 I L FA+ LR+ LR+DPD+ILLGE+RD ET ++A+ AA TGHLV +TLHT AA A Sbjct: 325 AIDLD---FAAALRSILRQDPDIILLGEIRDRETAQVAVQAALTGHLVFSTLHTNSAAGA 381 Query: 234 VERL----VDSFPAQEKDPVRNQLAGSLRAVLSQKL---------------------EVD 268 + RL +D + L ++R V++Q+L Sbjct: 382 LTRLRDMGIDGY----------LLGATIRGVIAQRLLRRVCPTCRGAEQTGPACRTCNGS 431 Query: 269 KQEGRVALFELLINTPAVGNLIREG 293 GR +E+L +P + LI +G Sbjct: 432 GYSGRTVTYEMLQVSPRIAELIDQG 456 >UniRef50_B0T702 General secretory pathway protein E n=1 Tax=Caulobacter sp. K31 RepID=B0T702_CAUSK Length = 559 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 17/212 (8%) Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLG-APTVLP--- 113 L ++G++ AV + LR + HG S+ LRLL L+ LG T+LP Sbjct: 243 LPQDGRMRLAVR-GQEIDLRVATAPTLHGESVVLRLLDRSNLSLDFDALGFDDTILPSFQ 301 Query: 114 ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQR 173 ++L +G++LVTG TGSGK+TTL A + LN ILT+EDP+EY A Sbjct: 302 DVLARPHGIVLVTGPTGSGKTTTLYAALASLNSPT-RKILTIEDPIEYRLAGVNQTQVSP 360 Query: 174 EIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQA 233 +IGL TFA+ LR+ LR+DPDV+++GE+RD ET ++A+ +A TGH +L+TLHT AA A Sbjct: 361 QIGL---TFATALRSFLRQDPDVMMVGEIRDLETAQVAVQSALTGHTILSTLHTNSAAAA 417 Query: 234 VERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 V RL+D +P ++ ++ AVL+Q+L Sbjct: 418 VTRLID----MGMEPF--LISSTVNAVLAQRL 443 >UniRef50_A6W755 Type II secretion system protein E n=3 Tax=Actinomycetales RepID=A6W755_KINRD Length = 591 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 101/278 (36%), Positives = 144/278 (51%), Gaps = 27/278 (9%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRG----RMEAAPFDTPDVEELLR--EWLD 53 + I++ +V+ SD+HL S R+R+ G M A P V ++ LD Sbjct: 213 VNRILSDAVRLRCSDIHLESQRDQLRVRFRVDGLLRDVMSAPKRVAPSVISRIKIISGLD 272 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPT- 110 +R I ++G+ V A R S HG + +RLL P L LG Sbjct: 273 ISERRIP-QDGRTRVVVDGAAID-CRVSTLPALHGEKIVIRLLTRGDDVPSLPSLGFEPE 330 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + + L GL+L+TG TGSGK+ TL A + + + +I+TLEDPVE Sbjct: 331 QLEIFEKALSVPQGLVLITGPTGSGKTNTLYAAI-HATMSPEKNIITLEDPVEVQLPGIT 389 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + ++G MTF++GLR+ LR+DPD++L+GE+RDSET LAL A+ TGHLVL TLHT Sbjct: 390 QVQVHAKVG---MTFSAGLRSVLRQDPDIVLIGEVRDSETAELALKASMTGHLVLTTLHT 446 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 A A+ RLVD A +A SL A ++Q+L Sbjct: 447 NSAVGALTRLVDMGAAP------FLVASSLTAAIAQRL 478 >UniRef50_Q7UE44 General secretion pathway protein E n=1 Tax=Rhodopirellula baltica RepID=Q7UE44_RHOBA Length = 587 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 97/280 (34%), Positives = 145/280 (51%), Gaps = 31/280 (11%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAI 59 ++ I++ +V SD+HL P R+R+ G ++ +E+ + + Sbjct: 183 VQAILSGAVSAGASDIHLEPHKPEMRVRYRVDGELQVVMTIPNHIEDSVISRIKVMGDMD 242 Query: 60 LLENGQ-LDFAVSLAENQR---LRGSAFAQRHGISLALRLLP--SHCPQLEQLGAP---- 109 EN + D +++ EN + R S G L LRLL L +G P Sbjct: 243 TTENRRPQDGHLTVYENGKRVGFRISGIPTVDGQKLVLRLLDEGGQTFDLAGIGMPQRDY 302 Query: 110 TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 + ++ +G+ +VTG TGSGKSTTL A + +LN D +I+T+EDPVEY + Sbjct: 303 ETIRRVIDKPHGMFVVTGPTGSGKSTTLYAALQHLNDD-DRNIVTVEDPVEYRLPGINQV 361 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 E G M FA+ L+ +R+DPDVI+LGE+RD ET A+ AA TGHLV++TLHT Sbjct: 362 QSDNEFG---MGFANALKYIMRQDPDVIMLGEIRDCETATTAVQAALTGHLVISTLHTND 418 Query: 230 AAQAVERL----VDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 A AV+RL VD+F ++AGSL ++Q+L Sbjct: 419 AVGAVQRLADLGVDNF----------KIAGSLLGSVAQRL 448 >UniRef50_D1KAN6 Type II secretory ATPase PilB n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KAN6_9GAMM Length = 565 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 88/249 (35%), Positives = 133/249 (53%), Gaps = 26/249 (10%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLRE-------------WLDDDQ 56 ++K VSD+HL + R+R R++ D D ++ L E LD + Sbjct: 188 AIKLGVSDVHL-ETYKKFGRMRFRLDGVLIDQKDQDKDLFENYAAIVTRIKIMSKLDIAE 246 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLG----APT 110 R L ++G + V + R S G + +R+L + L E LG Sbjct: 247 RR-LPQDGAMSLKVG-DHDVDFRVSILPTSFGERVVMRILDTSSISLTLETLGFQDEDEQ 304 Query: 111 VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 + + G++LVTG TGSGKSTTL A +G +N+ D +ILT EDPVE+ + Sbjct: 305 AFKNAVDAPQGMVLVTGPTGSGKSTTLYAALGRINKD-DINILTAEDPVEFTIDGIGQVH 363 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 + +IGL TF++ LR+ LR+DP+V+++GE+RD ET +A+ AA TGHLVL+TLHT A Sbjct: 364 VKEDIGL---TFSAALRSFLRQDPEVVMVGEIRDKETADIAIKAALTGHLVLSTLHTNDA 420 Query: 231 AQAVERLVD 239 + RL++ Sbjct: 421 ISTITRLIN 429 >UniRef50_A7IH58 Type II secretion system protein E n=10 Tax=Rhizobiales RepID=A7IH58_XANP2 Length = 606 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/219 (42%), Positives = 126/219 (57%), Gaps = 42/219 (19%) Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLG-AP---TVLPE 114 L ++D V+L Q HG + +RLLP +++LG +P +L Sbjct: 300 LGRSEIDVRVALMPTQ----------HGEAAVIRLLPRDRGLLNMDKLGLSPGDADILKR 349 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEY----LYASQRCLI 170 LL +G+++VTG TGSGK+TTLA ++ LN+ ILT+EDPVEY +Y SQ Sbjct: 350 LLALPHGMVVVTGPTGSGKTTTLATILSILNEPT-RKILTIEDPVEYEIKGVYQSQ---- 404 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 + IGL TFA+ LR+ LR DPDVI++GE+RD ET +A+ AA TGHLVL TLHT A Sbjct: 405 VKPAIGL---TFAAALRSFLRHDPDVIMVGEVRDPETAHIAVHAALTGHLVLTTLHTDTA 461 Query: 231 AQAVERLVD----SFPAQEKDPVRNQLAGSLRAVLSQKL 265 A +V RL+D F L +LRAV++Q+L Sbjct: 462 AASVPRLLDLGVEGF----------LLKSTLRAVIAQRL 490 >UniRef50_B6J5I2 Type 4 pili biogenesis protein (Nuleotide-binding protein) n=6 Tax=Coxiella burnetii RepID=B6J5I2_COXB1 Length = 517 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 106/356 (29%), Positives = 178/356 (50%), Gaps = 49/356 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVE--------ELLREW 51 + +++ ++ SD+H +RIR R++ T P+ + ++L E Sbjct: 159 VNQVLTDAIYREASDVHF-EPMQQHYRIRMRIDGILHTTTLLPNTQSPAMSSRLKVLAEL 217 Query: 52 LDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLG-- 107 ++R L ++G+ F + R S+ G + +RLL H + E+LG Sbjct: 218 DISEKR--LPQDGRFYFTTLTHLKRDCRLSSCPTLFGEKIVIRLLNPVHHLLKFEELGLE 275 Query: 108 --APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 ++ + +K GLILVTG T SGK+ +L A + +N +I T+EDP+E A Sbjct: 276 EKPKQLIMKKIKQPQGLILVTGPTRSGKTVSLYAALNQINS-TQKNISTVEDPIEIQLAG 334 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 + + + GL+ FA+ LRA LR+DPDVI++GE+RD ET +A+ AA TGHLVL+TL Sbjct: 335 VTQVNIRPKAGLN---FAAVLRAFLRQDPDVIMVGEIRDFETASIAVRAAHTGHLVLSTL 391 Query: 226 HTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLE-----------------VD 268 HT A + + RL+D +P LA L+ V++Q+L ++ Sbjct: 392 HTNSAVECITRLID----MGIEPF--NLASVLKLVVAQRLVRQLCAHCQATKISCPFCLN 445 Query: 269 KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 + +GR ++E+L TP++ LI + ++ Q + Q GM T Q+ ++ G Sbjct: 446 RYQGRTGMYEVLPITPSIIELILQKRSAQ--EINACAIQEGMQTLWQAALNKAKTG 499 >UniRef50_C6Y3P1 Type II secretion system protein E n=2 Tax=Sphingobacteriaceae RepID=C6Y3P1_PEDHD Length = 477 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/253 (33%), Positives = 141/253 (55%), Gaps = 23/253 (9%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA--------APFDTPDVEELLREWLD- 53 +E ++A + + SD+H+ + + R+R R++ + + P + ++ + Sbjct: 103 LENLIAEAKRLKSSDIHI-ETYEEKCRVRIRIDGMLIERYLLSRLEYPAIINRIKILANL 161 Query: 54 DDQRAILLENGQLDFAVSLAENQ-RLRGSAFAQRHGISLALRLLPSHCPQLEQL------ 106 D L ++G+++F A++Q +R S +G + LRLL + ++ Sbjct: 162 DIAEKRLPQDGRINFKT--AQHQFDIRVSVLPTLYGEKVVLRLLNNDATNIDLYTLGFAE 219 Query: 107 GAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 G E +K NG++L++G TGSGK+TTL A + LN++ +ILT+EDP+EY Sbjct: 220 GDLNNYLEGVKRPNGIVLISGPTGSGKTTTLYATLKLLNKNT-RNILTIEDPIEYTLDGI 278 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + IGL TFA+ LR LR+DPDVI++GE+RD ET +A+ AA TGHLVL+T+H Sbjct: 279 NQVQLKENIGL---TFAAALRTFLRQDPDVIMVGEIRDPETANMAIRAALTGHLVLSTIH 335 Query: 227 TRGAAQAVERLVD 239 T A + RL+D Sbjct: 336 TNSAWGTISRLMD 348 >UniRef50_D2QZA7 Type II secretion system protein E n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZA7_9PLAN Length = 596 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 104/289 (35%), Positives = 152/289 (52%), Gaps = 55/289 (19%) Query: 6 IVALSVKHNVSDLHLCSA---WPARWRIRGRMEAA---PFD-------------TPDVEE 46 ++ +VK SD+H+ A R+RI G++ + P + + D+ E Sbjct: 195 VIYHAVKEGASDIHIEPAERCVRVRYRIDGKLYKSLEVPLNLLGAVTSRIKIMASLDISE 254 Query: 47 LLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLE 104 R D + ++L+ ++D LR S F G +R+L + L Sbjct: 255 --RRLPQDGRVHVMLDGRKVD----------LRVSTFPGNRGEKTVIRVLDTRSVSLNLR 302 Query: 105 QLGAP----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHA--DAHILTLEDP 158 LG T L + + + NG++LVTG TGSGKSTTL A LN+ A + +I T+EDP Sbjct: 303 DLGFAEDILTPLQQSINAPNGIVLVTGPTGSGKSTTLYAA---LNEIASMENNICTVEDP 359 Query: 159 VEY-LYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAET 217 +EY L + +Q+R +GL TF+ LR LR+DPDVI++GE+RD ET R A+ AA T Sbjct: 360 IEYHLPLINQFQVQER-VGL---TFSKALRTLLRQDPDVIMVGEVRDDETARTAIQAALT 415 Query: 218 GHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAG-SLRAVLSQKL 265 GHLV +TLHT AA A+ RL++ V L G +L AVL+Q+L Sbjct: 416 GHLVFSTLHTNDAASAITRLINM-------GVEPYLIGAALNAVLAQRL 457 >UniRef50_B8FE33 General secretory pathway protein E n=2 Tax=Desulfobacteraceae RepID=B8FE33_DESAA Length = 578 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 150/279 (53%), Gaps = 35/279 (12%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAI------ 59 I++ +VK SD+H+ + ++R R++ +D + ++ L + + Sbjct: 203 ILSQAVKARASDIHI-EPYQTMLKVRYRVDGVLYDLIKPPKRIQSALVSRIKVMAKLNIA 261 Query: 60 ---LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL---------EQLG 107 L ++G+++ + N +R S G + LRLL L EQL Sbjct: 262 EKRLPQDGRIEIRIG-DRNVDIRVSTIPTTFGERIVLRLLDKSTTILKLTDIGFTGEQL- 319 Query: 108 APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + L+ G+ILVTG TGSGK+T+L A++ +N D +I+T+EDPVEY Q Sbjct: 320 --KTIHGLIHQPYGIILVTGPTGSGKTTSLYAVLSTINTE-DINIITIEDPVEY----QI 372 Query: 168 CLIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 I Q ++ +TFA GLR+ +R+DPDVIL+GE+RD ET +A+ ++ TGHLV +TLH Sbjct: 373 SGIGQIQVNPKIDLTFARGLRSVVRQDPDVILIGEIRDMETAEIAVQSSLTGHLVFSTLH 432 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL 265 T +A A+ RL+D +P ++ S+ AV++Q+L Sbjct: 433 TNDSASAITRLID----MNVEPFL--ISSSVLAVMAQRL 465 >UniRef50_B0TEE9 Type ii secretion system protein e, putative n=12 Tax=Firmicutes RepID=B0TEE9_HELMI Length = 570 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 12/169 (7%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQ--LEQLG----APTVLPELLKSENGLILVTGATGS 131 +R S HG +RLL + L QLG +++++ G+IL+TG TGS Sbjct: 272 MRVSTLPAIHGEKCVIRLLDKSNVRFDLRQLGFRDEVLRAYEKIVRNPYGMILITGPTGS 331 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC-MTFASGLRAAL 190 GK+TTL A + LN + +I+T+EDPVEY+ + Q ++ + + FASGLR+ L Sbjct: 332 GKTTTLYASIHELNT-PEKNIVTVEDPVEYVLDG----VNQVQVNMRAGLDFASGLRSIL 386 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 R+DPDVIL+GE+RD ET + + AA TGHLV +TLHT AA +V RLVD Sbjct: 387 RQDPDVILVGEIRDRETAEIGVRAATTGHLVFSTLHTNDAAGSVNRLVD 435 >UniRef50_Q1CWD4 Type II secretion system protein, GspE family n=2 Tax=Cystobacterineae RepID=Q1CWD4_MYXXD Length = 515 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 114/199 (57%), Gaps = 23/199 (11%) Query: 78 LRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTVL----PELLKSENGLILVTGATGS 131 +R S HG ++ALR+ + PQL LG P L ELL GLILV GATGS Sbjct: 218 IRVSILPTNHGPAVALRIARTGVRLPQLPALGFPEALLTKYQELLALPQGLILVAGATGS 277 Query: 132 GKSTTLAAMVGYLNQHAD--AHILTLEDPVEY---LYASQRCLIQQREIGLHCMTFASGL 186 GK+T+L A +G++ Q I T+EDP+E+ L+A + Q FA GL Sbjct: 278 GKTTSLYASLGHIQQSRGELTRIATIEDPIEFDVPLFAQTQVNAAQ------GFNFAHGL 331 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 RA LR+DP+VI++GE+RDSET R A+ A +GHL+L+T+H AA A RL+D Sbjct: 332 RAVLRQDPNVIMVGEIRDSETARTAIQAGLSGHLLLSTIHANSAAGAFNRLID----MGV 387 Query: 247 DPVRNQLAGSLRAVLSQKL 265 +P LA + A LSQ+L Sbjct: 388 EPF--LLASATAATLSQRL 404 >UniRef50_Q01NU4 Type II secretion system protein E (GspE) n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NU4_SOLUE Length = 566 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 98/279 (35%), Positives = 147/279 (52%), Gaps = 34/279 (12%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPF--DTPDVE---------ELLREWLDD 54 ++A +++ SD+H+ + +RIR R++ F + P E +L+ + Sbjct: 198 MIADAIEKRASDIHI-EPFEKEFRIRFRVDGVLFAQENPPRELKAAIISRLKLMAKLNIA 256 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 ++R L ++G++ + L LR S +G S+ +RLL L Sbjct: 257 ERR--LPQDGRIKIKI-LGREVDLRVSTLPTLYGESVVMRLLDRSSGDFYDLRRLGFDDH 313 Query: 115 LLKS-------ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 +L+ +G+ LVTG TGSGKSTTL + + +N D I+T+EDPVEY Sbjct: 314 MLRQMEHFTSMPHGIFLVTGPTGSGKSTTLYSALKRINL-PDKKIITIEDPVEYQMDGIN 372 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + +IGL TFA+GLR +R+DPDVI++GE+RD ET +A+ AA TGHLV ++LHT Sbjct: 373 QIHVNPQIGL---TFAAGLRHIVRQDPDVIMVGEIRDRETADIAIRAALTGHLVFSSLHT 429 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQL-AGSLRAVLSQKL 265 A A+ RLVD V N L SL AVL+Q+L Sbjct: 430 NDAPSAITRLVDM-------GVENYLITSSLVAVLAQRL 461 >UniRef50_A0K2T8 General secretory pathway protein E n=91 Tax=cellular organisms RepID=A0K2T8_BURCH Length = 499 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 102/282 (36%), Positives = 147/282 (52%), Gaps = 48/282 (17%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQLE----QLGAPTVL--PELLKSENGLILVTGATGS 131 +R S HG LRLL +L +G T++ +L+ +G++LVTG TGS Sbjct: 217 VRVSTLPTGHGERAVLRLLEKDAQRLNLEALGMGRDTLVQFDKLIGRPHGIVLVTGPTGS 276 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEY-LYASQRCLIQQREIGLHCMTFASGLRAAL 190 GK+TTL A + L + A +I+T+EDP+EY L + + +R IG MTFA LR+ L Sbjct: 277 GKTTTLYASMSRL-ETATTNIMTVEDPIEYDLSGIGQTQVNER-IG---MTFARALRSIL 331 Query: 191 REDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVR 250 R+DPDVI++GE+RD ET ++A+ A+ TGHLVLATLHT AA AV RL D +P Sbjct: 332 RQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAASAVTRLTD----MGVEPY- 386 Query: 251 NQLAGSLRAVLSQKL-----EVDKQE-----------------------GRVALFELLIN 282 LA SL VL+Q+L V K+E GR ++ELL+ Sbjct: 387 -LLASSLLGVLAQRLVRQLCPVCKEERHEDGRTVWHPVGCAKCGHSGYAGRRGVYELLVI 445 Query: 283 TPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 ++ +LI ++ G+ GM T + + + G Sbjct: 446 DDSIRSLIHRNAADA--EILAAGRAEGMRTLRDDAERWLASG 485 >UniRef50_P31742 General secretion pathway protein E n=23 Tax=Gammaproteobacteria RepID=GSPE_XANCP Length = 567 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/168 (44%), Positives = 105/168 (62%), Gaps = 10/168 (5%) Query: 78 LRGSAFAQRHGISLALRLLPSHCPQLE--QLG-APTVLPEL---LKSENGLILVTGATGS 131 LR S HG S+ +RLL + +LG LP+ L+ +G++LVTG TGS Sbjct: 270 LRVSTVPTAHGESVVMRLLDRETVVFDFYKLGFTEDFLPQFRKVLEQPHGIMLVTGPTGS 329 Query: 132 GKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALR 191 GK+TTL + LN +D I+T+EDPVEY + + +IGL FA+ LR+ +R Sbjct: 330 GKTTTLYTALSQLNT-SDVKIITVEDPVEYQIEGINQIQAKPQIGLD---FANALRSIVR 385 Query: 192 EDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +DPD+I++GE+RD ET R+A+ +A TGHLVL+TLHT AA + RL+D Sbjct: 386 QDPDIIMIGEMRDLETARIAIQSALTGHLVLSTLHTNNAAGGITRLLD 433 >UniRef50_B2IL31 Type II secretion system protein E n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL31_BEII9 Length = 380 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 94/335 (28%), Positives = 155/335 (46%), Gaps = 20/335 (5%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAI 59 ++ ++ + + S + S P RI G +E P D+ + D A Sbjct: 28 LDHLLTWAYRQGASRIAFLSGHPVWVRIHGLNQPVEPDPIPESDLALITNHIYGADGTAR 87 Query: 60 LLENGQLD--FAVSLAENQRLR------GSAFAQRHGISLALRLLPSHCPQLEQLGAPTV 111 L + D + V L RLR + ++R G+++ LR +P P LEQ Sbjct: 88 LKKGQDFDLTYEVLLDRGTRLRFRINATATRTSRRDGVNIILRPIPDKPPTLEQQRVEQG 147 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLED--PVEYLYASQRC- 168 + E + G+++V+GATGSGKST +A M + H +E P+E+++ R Sbjct: 148 ILESFRPHEGMVIVSGATGSGKSTLIAGMTMAKLNDPNGHYNIIEGAAPIEFMFDRMRSD 207 Query: 169 --LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 I Q EI + TF + +R +R +P I++GE RDS T+ A+ AA +GH + T+H Sbjct: 208 SSTIVQSEIPIDLPTFEAFIRGCMRREPTDIIVGECRDSVTMAAAIQAAISGHTLTTTIH 267 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAV 286 A ++R+ P E+D + + +A SLR V++QKL R+AL E L+ A+ Sbjct: 268 ANDVALTMQRIASLCPPDERDNLISAVAQSLRLVINQKLIRSSDGKRIALREFLVFNRAL 327 Query: 287 GNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRV 321 E P + + + T QSY+ + Sbjct: 328 RTTFLETDPKLWPALTRQ----AIATEGQSYEQAI 358 >UniRef50_A7NBK0 Type II secretion system protein/type IV-A pilus assembly ATPase PilB n=20 Tax=Francisella RepID=A7NBK0_FRATF Length = 593 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 89/274 (32%), Positives = 145/274 (52%), Gaps = 31/274 (11%) Query: 10 SVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---------PDVEELLR--EWLDDDQRA 58 +++ SD+H + +RIR R++ +T P V L+ LD ++ Sbjct: 208 AIQKGASDIHF-EPYEKNFRIRYRIDGLLIETFNTTKKNLAPKVISRLKIMSSLDIAEKR 266 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTVLPE-- 114 I ++G+ ++S + R S G + LR++ S Q+ EQLG E Sbjct: 267 IP-QDGKFKISLSREKAIDFRVSTCPISFGEKVVLRIIDSSSTQIPIEQLGFSESQKETY 325 Query: 115 --LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQ 172 ++ G++LVTG TGSGK+ TL + LN+ + +I T EDPVE + + Sbjct: 326 LKYIQQPQGMVLVTGPTGSGKTVTLYTGINILNK-PEKNISTAEDPVELIVKGINQVSVN 384 Query: 173 REIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQ 232 + GL TFA+ L++ LR+DPD+I++GE+RD ET +A+ A++TGHLV++TLHT A + Sbjct: 385 NKQGL---TFAAALKSFLRQDPDIIMVGEIRDIETGSIAIKASQTGHLVMSTLHTNSAPE 441 Query: 233 AVERLVD-SFPAQEKDPVRNQLAGSLRAVLSQKL 265 + RLVD P R +A S+ +++Q+L Sbjct: 442 TLNRLVDMGLP-------RYNIATSVTLIIAQRL 468 >UniRef50_A9GDR9 General secretion pathway protein E n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GDR9_SORC5 Length = 592 Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 81/169 (47%), Positives = 110/169 (65%), Gaps = 18/169 (10%) Query: 103 LEQLG-AP---TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDP 158 L+ LG AP ++ L++ +G+ILVTG TGSGK+TTL A + +N+ + +ILT EDP Sbjct: 291 LDDLGFAPREYAIMDALIQRPDGIILVTGPTGSGKTTTLYACLNRINEPS-RNILTAEDP 349 Query: 159 VEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG 218 VEY + IGL TFAS LRA LR+DPDVI++GE+RD ET +A+ A+ TG Sbjct: 350 VEYEIGGIHQIHVHPGIGL---TFASALRAFLRQDPDVIMVGEIRDKETAEIAIHASLTG 406 Query: 219 HLVLATLHTRGAAQAVERLVDSFPAQEKDP--VRNQLAGSLRAVLSQKL 265 HLVL+TLHT AA AV RLV+ E +P VR+ + G +L+Q+L Sbjct: 407 HLVLSTLHTNDAAAAVTRLVE----MEIEPFLVRSSVIG----ILAQRL 447 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P52052 Uncharacterized protein yggR n=137 Tax=Enterobac... 480 e-134 UniRef50_C8WRG4 Twitching motility protein n=5 Tax=Bacteria RepI... 431 e-119 UniRef50_A5EV68 Twitching motility protein PilT n=4 Tax=Proteoba... 429 e-119 UniRef50_Q2JJR9 Twitching motility protein n=60 Tax=Bacteria Rep... 428 e-118 UniRef50_C9RU77 Twitching motility protein n=5 Tax=Bacilli RepID... 424 e-117 UniRef50_P24559 Twitching mobility protein n=63 Tax=Bacteria Rep... 422 e-116 UniRef50_B5YDI3 Type IV pilus retraction protein PilT n=96 Tax=B... 419 e-116 UniRef50_B1I3G0 Twitching motility protein n=29 Tax=Firmicutes R... 417 e-115 UniRef50_C7R4E5 Twitching motility protein n=13 Tax=Bacteria Rep... 417 e-115 UniRef50_Q1J1R7 Tfp pilus assembly protein, pilus retraction ATP... 413 e-114 UniRef50_D2R472 Twitching motility protein n=8 Tax=Bacteria RepI... 412 e-114 UniRef50_Q1DAU3 Twitching mobility protein n=44 Tax=Bacteria Rep... 410 e-113 UniRef50_Q3Z802 Twitching mobility protein n=13 Tax=Bacteria Rep... 409 e-113 UniRef50_C1RHW7 Pilus retraction protein PilT n=3 Tax=Actinobact... 408 e-112 UniRef50_A5GHN1 Tfp pilus assembly protein, pilus retraction ATP... 407 e-112 UniRef50_A6WCF2 Twitching motility protein n=56 Tax=Bacteria Rep... 402 e-111 UniRef50_Q1IRV7 Twitching motility protein n=13 Tax=Bacteria Rep... 402 e-111 UniRef50_C1AA13 Twitching mobility protein n=1 Tax=Gemmatimonas ... 401 e-110 UniRef50_B8D2C8 Tfp pilus assembly protein, pilus retraction ATP... 401 e-110 UniRef50_Q3A779 Tfp pilus assembly protein, pilus retraction ATP... 400 e-110 UniRef50_A1SFQ7 Twitching motility protein n=31 Tax=Bacteria Rep... 398 e-109 UniRef50_B2ULW6 Twitching motility protein n=4 Tax=Chlamydiae/Ve... 396 e-109 UniRef50_C8W152 Twitching motility protein n=2 Tax=Bacteria RepI... 395 e-108 UniRef50_Q2JR70 Twitching mobility protein PilT n=32 Tax=Cyanoba... 395 e-108 UniRef50_Q8DLE1 Twitching mobility protein n=9 Tax=Cyanobacteria... 394 e-108 UniRef50_A5IML1 Twitching motility protein n=11 Tax=Thermotogace... 394 e-108 UniRef50_A8Z6P0 Twitching mobility protein n=12 Tax=Epsilonprote... 391 e-107 UniRef50_A7A8S6 Putative uncharacterized protein n=2 Tax=Bacteri... 390 e-107 UniRef50_B8FGS0 Twitching motility protein n=1 Tax=Desulfatibaci... 389 e-107 UniRef50_B9Y805 Putative uncharacterized protein n=1 Tax=Holdema... 389 e-106 UniRef50_Q06581 Twitching motility protein n=117 Tax=Bacteria Re... 388 e-106 UniRef50_Q1K4H3 Twitching motility protein n=1 Tax=Desulfuromona... 387 e-106 UniRef50_B6BQP9 Type II Secretion PilT n=4 Tax=Proteobacteria Re... 387 e-106 UniRef50_C4ZCI9 Predicted ATPase involved in pili biogenesis, Pi... 385 e-105 UniRef50_B2V7T3 Twitching motility protein n=8 Tax=Bacteria RepI... 384 e-105 UniRef50_B9XBG1 Twitching motility protein n=1 Tax=bacterium Ell... 384 e-105 UniRef50_A5FPX9 Twitching motility protein n=4 Tax=Dehalococcoid... 383 e-105 UniRef50_Q1V0I1 Type II Secretion PilT n=3 Tax=root RepID=Q1V0I1... 383 e-105 UniRef50_B9LZ76 Twitching motility protein n=98 Tax=cellular org... 382 e-105 UniRef50_Q2SCC2 Tfp pilus assembly protein, ATPase PilU n=58 Tax... 382 e-105 UniRef50_B8GP69 Type II secretion system protein (Twitching moti... 381 e-104 UniRef50_C3WB33 Twitching motility protein n=2 Tax=Fusobacterium... 380 e-104 UniRef50_A6C2Q7 Twitching motility protein n=1 Tax=Planctomyces ... 377 e-103 UniRef50_C1A6T5 Twitching mobility protein n=1 Tax=Gemmatimonas ... 377 e-103 UniRef50_B2SPL0 Tfp pilus assembly protein n=67 Tax=Proteobacter... 377 e-103 UniRef50_B2ULW5 Twitching motility protein n=17 Tax=cellular org... 377 e-103 UniRef50_UPI0001C37050 pili biogenesis protein PilT-like ATPase ... 377 e-103 UniRef50_A9BA92 Tfp pilus assembly protein, pilus retraction ATP... 377 e-103 UniRef50_C2LMJ4 Tfp pilus assembly protein PilT n=2 Tax=Proteus ... 376 e-103 UniRef50_B4D003 Twitching motility protein n=1 Tax=Chthoniobacte... 375 e-102 UniRef50_C4Z961 Predicted ATPase involved in pili biogenesis, Pi... 375 e-102 UniRef50_C3RLB1 Twitching motility protein n=3 Tax=Bacteria RepI... 375 e-102 UniRef50_A1AM74 Twitching motility protein n=1 Tax=Pelobacter pr... 374 e-102 UniRef50_C9RN76 Twitching motility protein n=1 Tax=Fibrobacter s... 374 e-102 UniRef50_C0D956 Putative uncharacterized protein n=1 Tax=Clostri... 374 e-102 UniRef50_A5GMV2 Twitching motility protein n=3 Tax=Synechococcus... 374 e-102 UniRef50_A7I2W5 Twitching mobility protein n=7 Tax=Epsilonproteo... 373 e-102 UniRef50_Q1CXQ0 Twitching motility protein PilT n=6 Tax=Deltapro... 372 e-101 UniRef50_A1K8L4 Twitching motility protein n=180 Tax=cellular or... 371 e-101 UniRef50_Q0AZI8 Twitching motility protein n=1 Tax=Syntrophomona... 370 e-101 UniRef50_A6DTL1 Twitching motility protein n=1 Tax=Lentisphaera ... 370 e-101 UniRef50_C4Z3A4 Twitching motility protein PilT n=1 Tax=Eubacter... 370 e-101 UniRef50_B4CW85 Twitching motility protein n=1 Tax=Chthoniobacte... 370 e-101 UniRef50_Q028H4 Twitching motility protein n=1 Tax=Candidatus So... 368 e-100 UniRef50_Q47FA9 Pilus retraction protein PilT n=7 Tax=Betaproteo... 367 e-100 UniRef50_C6RE58 Twitching mobility protein n=2 Tax=Campylobacter... 365 1e-99 UniRef50_D2DXQ5 Twitching motility protein n=1 Tax=uncultured Ve... 365 1e-99 UniRef50_A0RMV4 Twitching motility protein PilT n=6 Tax=Epsilonp... 365 1e-99 UniRef50_A6W7B3 Twitching motility protein n=6 Tax=Bacteria RepI... 364 3e-99 UniRef50_B1ZN20 Twitching motility protein n=3 Tax=Verrucomicrob... 364 3e-99 UniRef50_B9YDY2 Putative uncharacterized protein n=6 Tax=Bacteri... 363 5e-99 UniRef50_C7QZF3 Twitching motility protein n=1 Tax=Jonesia denit... 363 6e-99 UniRef50_Q1QT12 Twitching motility protein n=19 Tax=Gammaproteob... 362 8e-99 UniRef50_A1TQ20 Twitching motility protein n=3 Tax=Comamonadacea... 362 8e-99 UniRef50_D1Y3N0 Twitching mobility protein n=1 Tax=Pyramidobacte... 362 1e-98 UniRef50_B3E8J7 Twitching motility protein n=8 Tax=Desulfuromona... 361 2e-98 UniRef50_Q2LRM4 Pili retraction protein n=11 Tax=Bacteria RepID=... 360 4e-98 UniRef50_Q1CXQ1 Twitching motility protein n=4 Tax=Myxococcales ... 359 1e-97 UniRef50_C8WIR6 Twitching motility protein n=1 Tax=Eggerthella l... 359 1e-97 UniRef50_B7C7D1 Putative uncharacterized protein n=1 Tax=Eubacte... 358 1e-97 UniRef50_B2KCH7 Twitching motility protein n=1 Tax=Elusimicrobiu... 358 2e-97 UniRef50_A6DU37 Pili retraction protein n=1 Tax=Lentisphaera ara... 358 2e-97 UniRef50_A1VIC5 Twitching motility protein n=2 Tax=Proteobacteri... 358 2e-97 UniRef50_B8GL39 Twitching motility protein n=1 Tax=Thioalkalivib... 357 2e-97 UniRef50_D1N9I8 Twitching motility protein n=1 Tax=Victivallis v... 357 3e-97 UniRef50_C6NZC5 Twitching motility protein n=1 Tax=Sideroxydans ... 357 3e-97 UniRef50_B0MN56 Putative uncharacterized protein n=12 Tax=Bacter... 357 3e-97 UniRef50_C5T541 Twitching motility protein n=1 Tax=Acidovorax de... 357 4e-97 UniRef50_A3ZSU4 Twitching motility protein PilT n=2 Tax=Planctom... 356 6e-97 UniRef50_C7RKW6 Twitching motility protein n=1 Tax=Candidatus Ac... 355 9e-97 UniRef50_C1XRI8 Pilus retraction protein PilT n=2 Tax=Meiothermu... 355 1e-96 UniRef50_UPI00016C3547 twitching motility protein PilT n=2 Tax=G... 354 3e-96 UniRef50_C5V2P0 Twitching motility protein n=1 Tax=Gallionella f... 352 9e-96 UniRef50_D0L1U2 Twitching motility protein n=6 Tax=Gammaproteoba... 351 2e-95 UniRef50_Q31PZ1 Twitching motility protein n=5 Tax=Cyanobacteria... 350 3e-95 UniRef50_B1Y6E6 Twitching motility protein n=14 Tax=Burkholderia... 350 4e-95 UniRef50_A6GEM2 Twitching motility protein n=1 Tax=Plesiocystis ... 349 8e-95 UniRef50_A4A7Z0 Twitching motility PilT family protein n=2 Tax=u... 348 2e-94 UniRef50_UPI0001744C3C Pilus retraction protein PilT n=1 Tax=Ver... 346 7e-94 UniRef50_B5YIZ9 Twitching motility protein PilT n=4 Tax=Bacteria... 346 8e-94 UniRef50_Q2ILF7 Twitching motility protein n=5 Tax=Myxococcales ... 345 1e-93 UniRef50_D2QYW4 Twitching motility protein n=4 Tax=Planctomyceta... 343 6e-93 UniRef50_A9LZU9 Twitching motility protein PilU n=30 Tax=Neisser... 339 9e-92 UniRef50_C0FXQ3 Putative uncharacterized protein n=1 Tax=Rosebur... 338 1e-91 UniRef50_B5YDI2 Type IV pilus assembly protein PilB n=20 Tax=Bac... 338 1e-91 UniRef50_B8D2C7 Tfp pilus assembly protein PilB n=5 Tax=Firmicut... 338 2e-91 UniRef50_B2V7A9 Type II secretion system protein E n=5 Tax=Aquif... 338 2e-91 UniRef50_C8X268 Type IV-A pilus assembly ATPase PilB n=1 Tax=Des... 337 2e-91 UniRef50_C9KK06 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 337 2e-91 UniRef50_A6GE25 Twitching motility protein n=2 Tax=Proteobacteri... 336 6e-91 UniRef50_A6DJN8 General secretory pathway protein E n=1 Tax=Lent... 335 9e-91 UniRef50_A8VZF7 Tfp pilus assembly protein pilus retraction ATPa... 335 1e-90 UniRef50_C0AEU6 Type IV pilus retraction protein PilT n=1 Tax=Op... 335 2e-90 UniRef50_C4XHR9 Putative twitching mobility protein n=1 Tax=Desu... 335 2e-90 UniRef50_A5TVA4 Possible pilus assembly ATP-binding protein n=8 ... 334 2e-90 UniRef50_C8NB70 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 332 7e-90 UniRef50_Q1ITV6 Twitching motility protein n=1 Tax=Candidatus Ko... 332 1e-89 UniRef50_A5EV69 Twitching motility protein PilU n=1 Tax=Dichelob... 332 1e-89 UniRef50_C6BWY7 Type II secretion system protein E n=1 Tax=Desul... 331 2e-89 UniRef50_B8DPS9 Twitching motility protein n=4 Tax=Desulfovibrio... 331 2e-89 UniRef50_A7HJC2 Type II secretion system protein E n=11 Tax=Ther... 331 3e-89 UniRef50_C0GQP1 Type II secretion system protein E n=1 Tax=Desul... 330 5e-89 UniRef50_B5YIG2 Type IV-A pilus assembly ATPase PilB n=4 Tax=Bac... 328 1e-88 UniRef50_C3WJA3 Pilus retraction protein PilT n=2 Tax=Fusobacter... 328 2e-88 UniRef50_B6J5I2 Type 4 pili biogenesis protein (Nuleotide-bindin... 328 2e-88 UniRef50_B9XSZ5 Type II secretion system protein E n=1 Tax=bacte... 327 2e-88 UniRef50_B8FQB2 Type II secretion system protein E n=4 Tax=Clost... 327 3e-88 UniRef50_A0K2T8 General secretory pathway protein E n=91 Tax=cel... 326 8e-88 UniRef50_C0QER1 PilB n=10 Tax=Proteobacteria RepID=C0QER1_DESAH 325 9e-88 UniRef50_P45792 Type IV pilus assembly protein tapB n=47 Tax=Pro... 325 1e-87 UniRef50_C9LRT0 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 325 1e-87 UniRef50_B7APV7 Putative uncharacterized protein n=2 Tax=Bacteri... 324 2e-87 UniRef50_Q48JN2 General secretion pathway protein GspE n=3 Tax=P... 324 2e-87 UniRef50_A8MGF8 Type II secretion system protein E n=1 Tax=Alkal... 324 2e-87 UniRef50_C0QPL5 General secretion pathway protein E (Type II tra... 324 3e-87 UniRef50_Q180E0 Putative type IV pilus-assembly protein n=8 Tax=... 323 3e-87 UniRef50_C4Z588 Type IV pilus assembly protein PilB n=9 Tax=Clos... 323 4e-87 UniRef50_UPI0001BC5494 hypothetical protein F3_04365 n=4 Tax=Fus... 323 6e-87 UniRef50_D2L8D4 Type II secretion system protein E n=1 Tax=Desul... 322 8e-87 UniRef50_A5F5L4 Type IV pilus assembly protein PilB n=41 Tax=Vib... 321 2e-86 UniRef50_B8CZA0 Type II secretion system protein E n=1 Tax=Halot... 320 3e-86 UniRef50_A6Q683 Type II secretion system protein E n=3 Tax=Epsil... 320 3e-86 UniRef50_Q01NU4 Type II secretion system protein E (GspE) n=1 Ta... 320 3e-86 UniRef50_Q181B0 Type IV pilus assembly protein n=5 Tax=Clostridi... 320 4e-86 UniRef50_B8FE33 General secretory pathway protein E n=2 Tax=Desu... 320 5e-86 UniRef50_B0TEE9 Type ii secretion system protein e, putative n=1... 319 1e-85 UniRef50_A0Q077 General secretion pathway protein E n=3 Tax=Clos... 318 1e-85 UniRef50_B6G0J4 Putative uncharacterized protein n=1 Tax=Clostri... 318 1e-85 UniRef50_A9EXH6 Putative twitching motility protein PilT n=1 Tax... 318 2e-85 UniRef50_B8FQ85 Type II secretion system protein E n=2 Tax=Desul... 318 2e-85 UniRef50_Q1Q109 Strongly similar to general secretory system typ... 318 2e-85 UniRef50_C6CY56 Type II secretion system protein E n=3 Tax=Bacil... 317 3e-85 UniRef50_B2A7G1 Type II secretion system protein E n=5 Tax=Firmi... 317 3e-85 UniRef50_B0S8Q3 Type II secretory pathway ATPase, protein E n=7 ... 317 4e-85 UniRef50_A3DEG0 Type II secretion system protein E n=5 Tax=Clost... 317 4e-85 UniRef50_A9BY08 General secretory pathway protein E n=2 Tax=Prot... 315 1e-84 UniRef50_C4V5N5 Tfp pilus assembly protein PilT n=2 Tax=Selenomo... 315 1e-84 UniRef50_B2SSM0 Type IV-A pilus assembly ATPase PilB n=47 Tax=Pr... 315 1e-84 UniRef50_Q1Q644 Strongly similar to general secretion pathway pr... 315 1e-84 UniRef50_P45759 Probable general secretion pathway protein E n=3... 315 1e-84 UniRef50_B4U620 Type II secretion system protein E n=3 Tax=Aquif... 315 1e-84 UniRef50_B1I3E7 Type II secretion system protein E n=4 Tax=Clost... 315 1e-84 UniRef50_B9XM22 Type II secretion system protein E n=1 Tax=bacte... 315 2e-84 UniRef50_A8ZWZ6 General secretory pathway protein E n=2 Tax=Delt... 315 2e-84 UniRef50_D1N174 Type II secretion system protein E n=1 Tax=Victi... 314 3e-84 UniRef50_Q0EY30 Type IV pilus biogenesis protein PilB n=1 Tax=Ma... 314 3e-84 UniRef50_A3ZX01 General secretion pathway protein E n=3 Tax=Plan... 313 4e-84 UniRef50_C7R600 Type II secretion system protein E n=1 Tax=Kangi... 313 4e-84 UniRef50_B6ELG1 Type IV pilus assembly protein PilB n=13 Tax=Gam... 313 5e-84 UniRef50_B4ST75 Type IV-A pilus assembly ATPase PilB n=56 Tax=Pr... 313 5e-84 UniRef50_Q1IRV6 Type II secretion system protein E n=24 Tax=Bact... 313 6e-84 UniRef50_Q0AZI9 Type II secretion system protein E n=1 Tax=Syntr... 313 6e-84 UniRef50_A7BSG5 Bacterial type II secretion system protein E n=1... 312 9e-84 UniRef50_D2QZA7 Type II secretion system protein E n=1 Tax=Pirel... 312 1e-83 UniRef50_D2QZD9 Type II secretion system protein E n=4 Tax=Planc... 312 1e-83 UniRef50_A6M148 Type II secretion system protein E n=18 Tax=Clos... 312 1e-83 UniRef50_A6C2Q8 Type II secretion system protein E n=3 Tax=Planc... 312 2e-83 UniRef50_B2ULL9 Type II secretion system protein E n=2 Tax=Verru... 311 2e-83 UniRef50_UPI0001746A79 hypothetical protein VspiD_01995 n=1 Tax=... 311 2e-83 UniRef50_A3CR73 PilB-like pili biogenesis ATPase, putative n=2 T... 311 2e-83 UniRef50_B9JMG1 Pilus assembly secretion ATP-binding protein n=1... 311 3e-83 UniRef50_P37093 General secretion pathway protein E n=178 Tax=Pr... 311 3e-83 UniRef50_A8UTG3 Type IV pilus assembly protein TapB n=1 Tax=Hydr... 311 3e-83 UniRef50_Q3J755 Type II secretion system protein E n=11 Tax=Gamm... 310 3e-83 UniRef50_A5D376 Type II secretory pathway, ATPase PulE/tfp pilus... 310 5e-83 UniRef50_D2L7F7 Type II secretion system protein E n=1 Tax=Desul... 310 5e-83 UniRef50_A8ZYV7 Type II secretion system protein E n=11 Tax=Delt... 309 7e-83 UniRef50_Q2RY72 Type II secretion system protein E n=1 Tax=Rhodo... 309 8e-83 UniRef50_B3PF17 General secretion pathway protein E n=8 Tax=Prot... 308 1e-82 UniRef50_Q1D9E1 General secretory pathway protein E n=17 Tax=Pro... 308 1e-82 UniRef50_P37094 Type IV pilus assembly protein pilF n=83 Tax=cel... 308 2e-82 UniRef50_C4XH26 General secretion pathway protein E n=1 Tax=Desu... 308 2e-82 UniRef50_A0LUI4 Type II secretion system protein E n=4 Tax=Bacte... 308 2e-82 UniRef50_C9LPW1 4-diphosphocytidyl-2C-methyl-D-erythritol kinase... 308 2e-82 UniRef50_B2A563 Type II secretion system protein E n=5 Tax=cellu... 308 2e-82 UniRef50_B3U4T7 Type II secretion system protein E n=1 Tax=Candi... 307 3e-82 UniRef50_B4U727 Type II secretion system protein E n=1 Tax=Hydro... 307 3e-82 UniRef50_D2L4Z0 Type II secretion system protein E n=1 Tax=Desul... 307 5e-82 UniRef50_C1SHL1 Type II secretory pathway, ATPase PulE/Tfp pilus... 306 6e-82 UniRef50_B8FI02 Type II secretion system protein E n=1 Tax=Desul... 306 7e-82 UniRef50_C0A4E0 Type II secretion system protein E n=2 Tax=Chlam... 306 7e-82 UniRef50_B9XRT3 Type II secretion system protein E n=2 Tax=Verru... 306 7e-82 UniRef50_Q1D8Z6 Type II/IV secretion system protein n=10 Tax=Del... 306 7e-82 UniRef50_B8HI64 Twitching motility protein n=1 Tax=Arthrobacter ... 305 1e-81 UniRef50_A6Q5B1 General secretory pathway protein E n=3 Tax=Epsi... 305 1e-81 UniRef50_A1TUR3 General secretory pathway protein E n=5 Tax=Prot... 305 1e-81 UniRef50_C0GMA1 Type II secretion system protein E n=1 Tax=Desul... 305 1e-81 UniRef50_UPI0001BC4418 general secretion pathway protein E n=1 T... 305 1e-81 UniRef50_Q894E4 General secretion pathway protein E n=1 Tax=Clos... 305 2e-81 UniRef50_P31742 General secretion pathway protein E n=23 Tax=Gam... 305 2e-81 UniRef50_Q15ZI3 Type II secretion system protein E n=119 Tax=Pro... 304 2e-81 UniRef50_B0RYX5 Type II secretory pathway ATPase n=78 Tax=cellul... 304 3e-81 UniRef50_A1WFR3 Type II secretion system protein E (GspE) n=8 Ta... 304 3e-81 UniRef50_A8URM8 Putative uncharacterized protein n=3 Tax=Hydroge... 304 3e-81 UniRef50_Q00512 General secretion pathway protein E n=10 Tax=Pro... 303 4e-81 UniRef50_C4L4L3 Type II secretion system protein E n=1 Tax=Exigu... 303 4e-81 UniRef50_B1ZUM1 Type II secretion system protein E n=1 Tax=Opitu... 303 4e-81 UniRef50_B1ZZG2 Type II secretion system protein E n=8 Tax=Chlam... 303 4e-81 UniRef50_Q1YQV4 Putative general secretion pathway protein E n=1... 303 5e-81 UniRef50_B1ZZ35 Type II secretion system protein E n=4 Tax=Bacte... 303 6e-81 UniRef50_B0UAH1 Type II secretion system protein E n=1 Tax=Methy... 303 6e-81 UniRef50_D1B5J6 Type II secretion system protein E n=3 Tax=Syner... 303 6e-81 UniRef50_UPI0001746BDE type II secretion system protein E n=3 Ta... 303 6e-81 UniRef50_Q2S330 Twitching motility protein PilT n=2 Tax=Rhodothe... 303 7e-81 UniRef50_B1ZZG0 Type II secretion system protein E n=4 Tax=Verru... 303 7e-81 UniRef50_B2V6W7 Type II secretion system protein E n=2 Tax=Hydro... 303 8e-81 UniRef50_A7GEM1 General secretion pathway protein E n=10 Tax=Clo... 302 8e-81 UniRef50_A1U404 Type II secretion system protein E n=8 Tax=Gamma... 302 9e-81 UniRef50_A6W755 Type II secretion system protein E n=3 Tax=Actin... 302 9e-81 UniRef50_B0VJ41 Type IV pilus biogenesis protein PilB n=1 Tax=Ca... 302 1e-80 UniRef50_Q0AKY1 Type II secretion system protein E n=2 Tax=Prote... 302 1e-80 UniRef50_C9A706 Type II/IV secretion system protein n=1 Tax=Ente... 302 1e-80 UniRef50_A1SFQ9 Type II secretion system protein E n=1 Tax=Nocar... 302 1e-80 UniRef50_C1XWL4 Type II secretory pathway, ATPase PulE/Tfp pilus... 302 1e-80 UniRef50_B4D852 Type II secretion system protein E n=1 Tax=Chtho... 302 1e-80 UniRef50_A1TTE0 Type IV-A pilus assembly ATPase PilB n=3 Tax=Com... 302 1e-80 UniRef50_A5N7G6 ExeE2 n=3 Tax=Clostridium RepID=A5N7G6_CLOK5 302 2e-80 UniRef50_Q97HA7 General secretion pathway protein E, ATPase n=1 ... 302 2e-80 UniRef50_A8PPD5 Type IV pilus assembly protein TapB n=1 Tax=Rick... 301 2e-80 UniRef50_C1AA14 Type IV pilus assembly protein PilB n=1 Tax=Gemm... 301 2e-80 UniRef50_Q3SKS0 Pilus assembly pathway ATPase PilB n=3 Tax=Prote... 301 3e-80 UniRef50_C6Y3P1 Type II secretion system protein E n=2 Tax=Sphin... 301 3e-80 UniRef50_P31703 General secretion pathway protein E n=26 Tax=Pro... 301 3e-80 UniRef50_C6Q9T1 Type II secretion system protein E n=1 Tax=Hypho... 300 3e-80 UniRef50_C4SWB4 Type II secretion system protein n=9 Tax=Enterob... 300 3e-80 UniRef50_D1BN08 Type II secretion system protein E n=3 Tax=Veill... 300 4e-80 UniRef50_B0MQV8 Putative uncharacterized protein n=2 Tax=Clostri... 300 4e-80 UniRef50_D1RBB2 Putative uncharacterized protein n=1 Tax=Parachl... 300 4e-80 UniRef50_C8W1Q1 Type II secretion system protein E n=1 Tax=Desul... 300 4e-80 UniRef50_C8X3E6 Type II secretion system protein E n=2 Tax=Desul... 300 4e-80 Sequences not found previously or not previously below threshold: >UniRef50_P52052 Uncharacterized protein yggR n=137 Tax=Enterobacteriaceae RepID=YGGR_ECOLI Length = 326 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 326/326 (100%), Positives = 326/326 (100%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL Sbjct: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN Sbjct: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM Sbjct: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS Sbjct: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH Sbjct: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 Query: 301 VIQTGQQVGMITFQQSYQHRVGEGRL 326 VIQTGQQVGMITFQQSYQHRVGEGRL Sbjct: 301 VIQTGQQVGMITFQQSYQHRVGEGRL 326 >UniRef50_C8WRG4 Twitching motility protein n=5 Tax=Bacteria RepID=C8WRG4_ALIAD Length = 347 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 156/329 (47%), Positives = 222/329 (67%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME--AAPFDTPDVEELLREWLDDDQRA 58 + ++EI+AL+ + SD+HL + P +R+ G +E + D+E R+ L +++ Sbjct: 2 VQIDEILALAKEKEASDVHLSAGAPVTYRVHGDLEPMGSKLMPVDLEAFARQMLSEERWQ 61 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +E G++DF+ S+ R R +A+ QR IS+A RL+P P +E+L P+V L+ Sbjct: 62 RFMEAGEIDFSYSIPGVARFRVNAYRQRGSISIAARLIPQRIPTMEELNLPSVFKALMNR 121 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAA++ +NQ HI+TLEDP+EYL+ + +I QREIG Sbjct: 122 PYGLVLVTGPTGSGKSTTLAAVLDAINQTQRRHIITLEDPIEYLHTHKLSIIDQREIGQD 181 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 FA LRAALR+DPD++L+GE+RD ETI A+TA+ETGHLV ATLHT A Q VER++ Sbjct: 182 TSGFAPALRAALRQDPDILLVGEMRDLETIATAITASETGHLVFATLHTSDAVQTVERII 241 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP +++ +R QLAG L V+SQ+L + GRVA FE+L+NTPAV NLIR GKTHQ Sbjct: 242 DVFPPEQQGQIRIQLAGVLAGVVSQRLHRTRDGRGRVASFEVLVNTPAVANLIRSGKTHQ 301 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++QTG+Q GMIT + S + V +G++ Sbjct: 302 IGAMMQTGRQFGMITMEMSIRELVQQGKI 330 >UniRef50_A5EV68 Twitching motility protein PilT n=4 Tax=Proteobacteria RepID=A5EV68_DICNV Length = 357 Score = 429 bits (1104), Expect = e-119, Method: Composition-based stats. Identities = 147/329 (44%), Positives = 205/329 (62%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 + +++++ + K SDLHL P RI G R+ P + +++ + D Q Sbjct: 13 LKLDDLLRFAQKQGASDLHLSCGVPPMIRIDGDVRRLNLPPLQNQQMRDMIFGIMTDAQM 72 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E + DF+ + R R + F Q G+ + R +PS LE L AP +++ Sbjct: 73 KSFEEKWEADFSTEIRGVSRFRVNVFQQNRGMGIVFRTIPSKVLSLEDLKAPAKFVDIID 132 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ ++N + HILT+EDP+E+++ S++CL+ QRE+ Sbjct: 133 VPRGLVLVTGPTGSGKSTTLAAMIDHINNNRHEHILTVEDPIEFVHESKKCLVNQREVHR 192 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +F++ LRAALREDPD+IL+GELRD ETIRLALTAAETGHLV TLHT AA+ ++R+ Sbjct: 193 DTQSFSNALRAALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI 252 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 +D FP +EK VR+ L+ SLRAV++Q L GRVA E+L+ T AV NLIRE K Q Sbjct: 253 IDVFPGEEKQLVRSMLSESLRAVIAQTLLKKIGGGRVAAHEVLVGTSAVKNLIREDKVAQ 312 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + IQTG Q GM T Q+ V EG++ Sbjct: 313 IYSTIQTGSQYGMQTLDQALSALVKEGKV 341 >UniRef50_Q2JJR9 Twitching motility protein n=60 Tax=Bacteria RepID=Q2JJR9_SYNJB Length = 376 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 147/332 (44%), Positives = 214/332 (64%), Gaps = 8/332 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +E+++ V+ SD+H+ + P +RI G +E P +V+ L+ L+++QR Sbjct: 2 IEDLMEAIVQKGGSDIHISAGLPPYFRINGHLEPTEHEPLSAEEVQRLIFSMLNNNQRKQ 61 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L +N +LD + + R R + + R + A+R L S P +++LG P V E + Sbjct: 62 LEQNWELDCSYGVRGIGRFRVNVYRDRGTYACAMRALASEIPNIDKLGLPDVCKEAARLP 121 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLA+M+ +N+ HILT+EDP+EY+Y R +I QR++G Sbjct: 122 RGLVLVTGPTGSGKSTTLASMIDMINRERAEHILTIEDPIEYIYTPIRSIIHQRQLGEDT 181 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+ LRAA+REDPDVIL+GE+RD ETI+LA+TAAETGHL AT+HT AAQ V+RLVD Sbjct: 182 KSFANALRAAMREDPDVILIGEMRDLETIQLAITAAETGHLCFATVHTSSAAQTVDRLVD 241 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQ----KLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 FP +++ +R QL+ SL+AV SQ +L E GRV + E+++ TPA+ NLIREGK Sbjct: 242 VFPPEQQQQIRVQLSNSLKAVFSQTLARRLNPKPGEPGRVLVQEIMVVTPAIANLIREGK 301 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 T Q+ IQTG + GM T +Q + +G++ Sbjct: 302 TAQIYSAIQTGGKQGMKTLEQDLANLYLQGKI 333 >UniRef50_C9RU77 Twitching motility protein n=5 Tax=Bacilli RepID=C9RU77_GEOSY Length = 351 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 145/329 (44%), Positives = 213/329 (64%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRA 58 +E ++ + + SD+HL P +R+ G + A + + E++ + + Sbjct: 4 KLEALLRAAFECRASDVHLTVGAPPIFRVNGELRAYGHERLHPEETEQMAKAVIPAPLWQ 63 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 E G+LDF+ +A R R + F QR +SLA+RL+P P LE+LG P VL + + Sbjct: 64 QFQETGELDFSYGIAGVSRFRLNVFKQRSCVSLAVRLIPVRIPTLEELGLPDVLKRIAEK 123 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 +GL+LVTG TGSGKSTTLAAM+ Y+N+ HI+TLEDP+EYL+ + +I QRE+G Sbjct: 124 PHGLVLVTGPTGSGKSTTLAAMIDYMNKTMSKHIITLEDPIEYLHKHGKSIIDQREVGFD 183 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA+GLRAALR+DPDVIL+GE+RD ETI+ A+TAAETGHLVL TLHT A A+ER++ Sbjct: 184 TGSFAAGLRAALRQDPDVILVGEMRDLETIQTAITAAETGHLVLGTLHTASAPAAIERMI 243 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP ++ +R QLA L A+++Q+L ++ + GR A E+L+N AV NLIR K HQ Sbjct: 244 DVFPPAQQAQIRLQLASVLVAIIAQRLFPNRHKTGRTAALEILVNNAAVANLIRNEKEHQ 303 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +++QT + +GM T + S + +GR+ Sbjct: 304 IINIMQTSRSIGMQTMEMSVKELAADGRI 332 >UniRef50_P24559 Twitching mobility protein n=63 Tax=Bacteria RepID=PILT_PSEAE Length = 344 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 151/329 (45%), Positives = 206/329 (62%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 M++ E++A S K SDLHL + P R+ G R+ P + V L+ + ++D QR Sbjct: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E + DF+ + R R +AF Q G R +PS +E+LG V + Sbjct: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ YLN HILT+EDP+E+++ S++CL+ QRE+ Sbjct: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 + F+ LR+ALREDPD+IL+GE+RD ETIRLALTAAETGHLV TLHT AA+ ++R+ Sbjct: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VD FPA+EK VR+ L+ SL++V+SQ L GRVA E++I TPA+ NLIRE K Q Sbjct: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + IQTG +GM T + V +G + Sbjct: 301 MYSAIQTGGSLGMQTLDMCLKGLVAKGLI 329 >UniRef50_B5YDI3 Type IV pilus retraction protein PilT n=96 Tax=Bacteria RepID=B5YDI3_DICT6 Length = 360 Score = 419 bits (1078), Expect = e-116, Method: Composition-based stats. Identities = 149/331 (45%), Positives = 217/331 (65%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM----EAAPFDTPDVEELLREWLDDDQ 56 +++ EI+ +++ SD+H+ S P +RI+G + + L+ L ++Q Sbjct: 5 LSIIEILQSALQKEASDVHITSGIPPVFRIKGHLIPQTQYPTLTPQLTYRLIFSLLTEEQ 64 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + L EN +LDF+V ++ R R +AF QR ++ RL+P P +E+L P VL +L Sbjct: 65 KQKLQENKELDFSVGISGEGRFRVNAFWQRGSLAAVFRLIPWKIPTIEELRLPLVLKDLA 124 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GLILVTG TGSGKSTTLA+M+ Y+N + HI+T+EDP+EYL+ ++ ++ QRE+G Sbjct: 125 ALPRGLILVTGPTGSGKSTTLASMIDYINSNFSRHIITIEDPIEYLHTHKKSIVNQREVG 184 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ LR+ALREDPDVIL+GE+RD ET +A+TAAETGHLV+ATLHT A Q++ER Sbjct: 185 SDTYSFANALRSALREDPDVILVGEMRDLETTAIAITAAETGHLVMATLHTVDAVQSIER 244 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 +VD FPA ++ +R QL+G ++ ++SQ+L K GR+ E+LI PAV +LIREGKT Sbjct: 245 IVDQFPAHQQQQIRLQLSGVIQGIISQQLLPRKDGTGRIVATEILIGIPAVRSLIREGKT 304 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ VIQTG + GM T QS V +G + Sbjct: 305 PQIYSVIQTGGRYGMQTMDQSLADLVKKGLI 335 >UniRef50_B1I3G0 Twitching motility protein n=29 Tax=Firmicutes RepID=B1I3G0_DESAP Length = 372 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 145/330 (43%), Positives = 208/330 (63%), Gaps = 4/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQR 57 ++ + ++ ++V+ SDLHL + P RI G + + P D+E+L+ L+ R Sbjct: 11 IDFDTLLRITVERQGSDLHLTAGLPPVVRIHGELVPLDYPPLKPSDIEQLVLPRLEPSYR 70 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 AIL E +LDF+ S+A R RG+ QR S LR++P P LE+LG P + L Sbjct: 71 AILDEKWELDFSYSVAGVSRFRGNIMRQRGSYSAVLRVVPYKAPALEELGLPPAVRNLCF 130 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ +N+ +++T+EDP+E+L+ + +++QRE+G Sbjct: 131 LPRGLVLVTGPTGSGKSTTLAAMIDLINRERRVNVVTVEDPIEFLHRHNKAIVRQREVGS 190 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA LR LR DPDVIL+GE+RD E+I +ALTAAETGHLV +TLHT+ A + R+ Sbjct: 191 DTRSFADALRHVLRADPDVILIGEMRDLESIAIALTAAETGHLVFSTLHTQTAPLTIHRI 250 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 VD F ++D +R QLA SL+ V++Q+L GRVA EL++ +PAV LIREGK H Sbjct: 251 VDVFQEHQRDQIRQQLADSLQGVIAQQLVPRADGKGRVAAVELMLASPAVRALIREGKEH 310 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ VIQT +Q GM T Q+ G++ Sbjct: 311 QMYSVIQTSRQQGMQTMDQALAELYTAGKI 340 >UniRef50_C7R4E5 Twitching motility protein n=13 Tax=Bacteria RepID=C7R4E5_JONDD Length = 566 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 133/332 (40%), Positives = 198/332 (59%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA-----PFDTPDVEELLREWLDDD 55 + +++++ V + SDLHL + R G + P D + + L Sbjct: 191 LILDDVLRDMVVQDASDLHLTNRSRPMIRKAGELTPLEGYDDPLDADALRRSIYTLLTQK 250 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 QR E +LDFA + + R R + + QR + A R++P+ LE LG P + Sbjct: 251 QREQFEEALELDFAYQVPDGARFRVNLYHQRDSVGAAFRVIPTEIKPLEDLGVPPSVGAF 310 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 K GL+LVTG TGSGKSTTLA+++ +N+ HI+T+EDP+E+L+ ++C++ QRE+ Sbjct: 311 AKLARGLVLVTGPTGSGKSTTLASIIDLVNRSRADHIMTVEDPIEFLHEHKKCVVNQREV 370 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +FAS L+ LR+DPD+IL+GELRD ETI +ALTAAETGHLV ATLHT+ AAQ ++ Sbjct: 371 GTDTHSFASALKHVLRQDPDIILVGELRDLETISIALTAAETGHLVFATLHTQDAAQTID 430 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++D FP ++++ +R QLA +++ V+ Q L GRV E+L+ TP + N+IREGK Sbjct: 431 RVIDVFPPEQQEQIRVQLASAIQGVVCQTLCKRADGPGRVVATEVLVATPGIRNMIREGK 490 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 THQ+ +Q G+ GM T Q G + Sbjct: 491 THQIYSSMQAGKNDGMHTMDQHLADLTKRGSI 522 >UniRef50_Q1J1R7 Tfp pilus assembly protein, pilus retraction ATPase PilT n=22 Tax=Bacteria RepID=Q1J1R7_DEIGD Length = 403 Score = 413 bits (1063), Expect = e-114, Method: Composition-based stats. Identities = 136/325 (41%), Positives = 208/325 (64%), Gaps = 4/325 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQRA 58 ++ +I+ + + SD+ L + P ++++ G E AP D +L+ +++ Q+ Sbjct: 7 DITDILRFAAEKGASDVILTAGLPPQFKLSGVYETHGFAPLAATDTRKLMYSMMNERQQR 66 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 I E +LDF+ +L E R R +AF QR + LRL+P+ +++G P + E+ + Sbjct: 67 IFEEKRELDFSFALGERARFRVNAFMQRGFVGGVLRLIPTQIRSAQEMGLPPHVIEIANA 126 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAM+ Y+N HI+T+EDP+E+++ ++ ++ QRE+G Sbjct: 127 PRGLVLVTGPTGSGKSTTLAAMIDYINSTKKLHIVTIEDPIEFMHGHKQSIVNQREVGSD 186 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++F LRAALR+ PDVIL+GE+RD ETIR A+TAAETGHLV+ TLHT A ++++R+V Sbjct: 187 TLSFQDALRAALRQAPDVILVGEMRDYETIRAAVTAAETGHLVMGTLHTNSAPESIDRIV 246 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP +++ +R QLA +L AV++Q+L GRV +ELLI PAV LIREGKT+Q Sbjct: 247 DVFPEEQQGQIRVQLANNLVAVMTQQLLPRLDGLGRVLAYELLIANPAVRALIREGKTYQ 306 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVG 322 + +QTG + GM+T + Sbjct: 307 IVSTMQTGAREGMVTMDAYLANLYR 331 >UniRef50_D2R472 Twitching motility protein n=8 Tax=Bacteria RepID=D2R472_9PLAN Length = 378 Score = 412 bits (1060), Expect = e-114, Method: Composition-based stats. Identities = 130/327 (39%), Positives = 196/327 (59%), Gaps = 3/327 (0%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 +++++ +VK SD+H+ P +R+ GRM E + D L++ + + Sbjct: 6 IDKLLQAAVKQGASDIHIVVGQPPVFRLHGRMRKLETKVLEADDAVGLMKSIAPERAQRE 65 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L E G DF + + R R S F QR +S+ LR +P+ +QLG P V +L+ Sbjct: 66 LQERGSADFGFAFGDLARFRVSIFKQRGFVSMVLRQIPNTMLTPQQLGLPDVCVKLVMRP 125 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL LVTG TGSGKSTTLA++V Y+N++ D HI+T+EDP+E+ + ++ + QREIG+ Sbjct: 126 RGLFLVTGPTGSGKSTTLASLVNYINENVDHHIITIEDPIEFYHYHKKSTVNQREIGVDV 185 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F+ +R ALR+DPDVIL+GE+RD ETI A++AAETGH+V TLHT A + R++D Sbjct: 186 PSFSEAIRRALRQDPDVILVGEMRDLETIEAAISAAETGHVVFGTLHTNSAQGTINRIID 245 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 +FP +D VR QL+ S+ V++Q L GR A +E+L+ T + NLIRE KT ++ Sbjct: 246 AFPGNLQDQVRTQLSTSIIGVVAQSLLPKIGGGRCAAYEILVVTSGIANLIRENKTFRIN 305 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 IQTG ++GM E ++ Sbjct: 306 SAIQTGAKLGMQLMDDHLFRLWREQKV 332 >UniRef50_Q1DAU3 Twitching mobility protein n=44 Tax=Bacteria RepID=Q1DAU3_MYXXD Length = 491 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 130/331 (39%), Positives = 198/331 (59%), Gaps = 7/331 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM----EAAPFDTPDVEELLREWLDDDQ 56 M + EI+ ++++ SD+HL + P +R+ G + + +V + +++ Q Sbjct: 24 MELNEILQIALRGGASDIHLKAGLPPMFRVDGSLVPLKDGRRLPPEEVARMAFGIMNEFQ 83 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + + ++D A + R R + F QR + LR++P ++ L P +L ++ Sbjct: 84 KEKFKGSNEVDLAYGVPGLGRFRVNVFQQRGTVGAVLRVIPFKVMTIQDLLLPQILAKIC 143 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 E GL+LVTG TGSGKSTTLAAM+ Y+N + +HI+T+EDP+E+L +R ++ QRE+G Sbjct: 144 GEERGLVLVTGTTGSGKSTTLAAMIDYINANETSHIMTIEDPIEFLIRDKRSIVNQREVG 203 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + MTFA L++ALR+DPDVIL+GE+RD ETI AL AAETGHLV++TLHT A + + R Sbjct: 204 VDTMTFAQALKSALRQDPDVILVGEMRDHETIETALHAAETGHLVMSTLHTLDATETINR 263 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE-GK 294 +V +FP ++ VR QLA L+AV+SQ+L GRVA E+L T V +I + + Sbjct: 264 IVSAFPPHQQKQVRLQLASVLKAVVSQRLVPRADGKGRVAAVEVLRVTARVREMIEDKDR 323 Query: 295 THQLPHVIQTGQQ-VGMITFQQSYQHRVGEG 324 T ++ I G GM TF QS V +G Sbjct: 324 TKEIHDAIAQGTDTYGMQTFDQSLMSLVRQG 354 >UniRef50_Q3Z802 Twitching mobility protein n=13 Tax=Bacteria RepID=Q3Z802_DEHE1 Length = 363 Score = 409 bits (1051), Expect = e-113, Method: Composition-based stats. Identities = 142/328 (43%), Positives = 203/328 (61%), Gaps = 5/328 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQ 56 M +E++ ++V+ SDLHL P RI G ++ +E++L E +Q Sbjct: 1 MRADELLKIAVEKKASDLHLRVPNPPVLRIDGALKPQTDWPVLYNKAIEQILEEITTPEQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R I +LDFA S+A R R + QR IS+A R +P +++LG P + EL+ Sbjct: 61 REIFYAEKELDFAYSVAGVARFRVNVMKQRGSISIAFRQVPFEIRSIDELGVPKICKELI 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GLILVTG TGSGKSTT+AAMV +LN +++T+EDP+EYLY + RC+I QR++G Sbjct: 121 LKPRGLILVTGPTGSGKSTTMAAMVDHLNNTDSRNVITIEDPIEYLYTNNRCIIAQRDLG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +F++ L+ ALR DPDVIL+GE+RD ETI A++AAETGHLV+ TLHT A Q ++R Sbjct: 181 DDTKSFSTALKYALRHDPDVILVGEMRDLETISTAISAAETGHLVVGTLHTTDAPQTIDR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKT 295 L+D FP ++ +R QL+ + AVL Q L + +GRVA FE+++ AV NLIR+ K Sbjct: 241 LIDIFPPDQQQQIRMQLSLVIEAVLVQTLLPKREGKGRVAAFEIMVANTAVRNLIRDKKA 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGE 323 H+L +V+Q + GM T QS V + Sbjct: 301 HELHNVMQLSAKDGMQTLDQSLAGLVRQ 328 >UniRef50_C1RHW7 Pilus retraction protein PilT n=3 Tax=Actinobacteridae RepID=C1RHW7_9CELL Length = 378 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 136/331 (41%), Positives = 199/331 (60%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 M ++E++ V+ SD H + P R+ G ++ P + L L Q Sbjct: 1 MPIDEVLREMVRLGASDAHFTTGSPPMVRLSGALQPLEQFGPVMPDGLRRSLYAILTQKQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R E +LD + ++ R R + + QR I A R++P LE+LG P V+ Sbjct: 61 RERYEEELELDVSYAVRGLARFRVNVYQQRESIGAAFRVIPYEIKPLEELGVPAVVGTFA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GL+LVTG TGSGKSTTLA+++ N+ HI+T+EDP+E+L+ ++ L+ QRE+G Sbjct: 121 GLPRGLVLVTGPTGSGKSTTLASIIDLANRTRQDHIMTVEDPIEFLHRHKKSLVNQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ L+ LR+DPD+IL+GE+RD ETI +ALTAAETGHLV ATLHT+ AAQ ++R Sbjct: 181 ADTHSFANALKHVLRQDPDIILVGEMRDLETISVALTAAETGHLVFATLHTQDAAQTIDR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 ++D FP+ ++ VR QLAG+++AV+ Q L GR E+L+ TPA+ NLIREGKT Sbjct: 241 VIDVFPSHQQAQVRTQLAGAIQAVVCQTLCKRADGPGRAVATEVLVATPAIRNLIREGKT 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ +Q G + GM T Q V +G++ Sbjct: 301 HQIYSSMQAGAKQGMHTMDQHLADLVKQGKI 331 >UniRef50_A5GHN1 Tfp pilus assembly protein, pilus retraction ATPase PilT n=5 Tax=Cyanobacteria RepID=A5GHN1_SYNPW Length = 357 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 147/332 (44%), Positives = 203/332 (61%), Gaps = 8/332 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +E+++ V+ SDLH+ S P R G++ P L+ L++ QR Sbjct: 5 IEDLMQELVEAGGSDLHIASGQPPYGRFSGQLRPMRDEPLMEESCNRLIFSMLNNSQRKT 64 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L + +LD A L R R + + Q+ + LR L S P +E L P V+ E K Sbjct: 65 LEQTWELDCAYGLKGVARFRVNVYRQKGSYAACLRALGSKIPSIELLNLPPVVVETSKRP 124 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGK+TTLAA++ ++N HILT+EDP+E++Y S + L+ QR++ Sbjct: 125 RGLVLVTGPTGSGKTTTLAALLDHINHSRAEHILTIEDPIEFVYKSDQSLVHQRQLNEDT 184 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+ LRAALREDPDVIL+GE+RD ETI+LA++AAETGHLV TLHT AAQ V+R+VD Sbjct: 185 RSFANALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVDRMVD 244 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-----GRVALFELLINTPAVGNLIREGK 294 FP ++ +R QL+GSL AV SQ L GRV E++INTPA+ NLIREGK Sbjct: 245 VFPPAQQTQIRVQLSGSLVAVFSQTLCRRSNPAPGQFGRVMAQEIMINTPAIANLIREGK 304 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 T QL IQTG ++GM T +++ V ++ Sbjct: 305 TAQLYSQIQTGGELGMQTLEKALADLVKTKQI 336 >UniRef50_A6WCF2 Twitching motility protein n=56 Tax=Bacteria RepID=A6WCF2_KINRD Length = 382 Score = 402 bits (1034), Expect = e-111, Method: Composition-based stats. Identities = 130/331 (39%), Positives = 194/331 (58%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 + + +++ +++ SD+HL R+ G +E T ++E++ L Q Sbjct: 31 VRVNDVLIRALELGASDIHLTVGTHPSARVSGEVEPMDEFPRMTTNVLQEMIYAILTQKQ 90 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R N +LDFA + + R R + + QR A R +P LE LG P V+ Sbjct: 91 RETFEANLELDFAYQVPGHSRFRVNVYRQRESTGAAFRQIPFEIKPLEDLGVPPVVGSFA 150 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + G +LVTG TGSGKSTTLA++V N+ HI+T+EDP+E+L+ + C++ QRE+G Sbjct: 151 GLQRGFVLVTGPTGSGKSTTLASVVDLANRTRRDHIMTVEDPIEFLHRHKSCIVNQREVG 210 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ L++ LR+DPD+IL+GE+RD ETI +ALTAAETGHLV TLHT AA ++R Sbjct: 211 EDTKSFANALKSVLRQDPDIILVGEMRDLETISVALTAAETGHLVFGTLHTSSAASTIDR 270 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 ++D FP ++ +R Q AG+++ ++ Q L GRV E+L+ TPA+ NLIREGKT Sbjct: 271 VIDVFPPHQQTQIRAQFAGAIQGIVCQTLCKRADGRGRVVATEVLVATPAIRNLIREGKT 330 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ +Q G Q GM T Q V ++ Sbjct: 331 HQIGTAMQAGAQFGMHTLDQHLAELVKTRQI 361 >UniRef50_Q1IRV7 Twitching motility protein n=13 Tax=Bacteria RepID=Q1IRV7_ACIBL Length = 375 Score = 402 bits (1034), Expect = e-111, Method: Composition-based stats. Identities = 131/331 (39%), Positives = 193/331 (58%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQR 57 + + +++ ++ SDLH+ + P + R+ G++ + AP + ++L + D Q+ Sbjct: 3 VTLSDLLKKMLEMQGSDLHITTNSPPQVRVHGKLVPLDLAPLTPAETKQLAYSVMTDAQK 62 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E+ +LDF+ L R R + F QR R++P +QLG P V+ +L Sbjct: 63 HRFEEDLELDFSFGLKGLARFRANCFNQRGACGSVYRVIPFEIKNFDQLGLPAVVSKLCD 122 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GLIL+TG TGSGKSTTLAAM+ +N HI+T+EDP+E+++ + CLI QRE+ Sbjct: 123 RPRGLILITGPTGSGKSTTLAAMIDKINIDRHEHIITIEDPIEFVHQHKNCLINQREVHS 182 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 F+ LRAALREDPDV+L+GE+RD ETI AL AETGHL LATLHT A+ + R+ Sbjct: 183 DTKGFSQALRAALREDPDVVLIGEMRDLETIESALRIAETGHLTLATLHTNSASSTINRI 242 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 +D FP+ ++ +R QL+ L ++ Q L GR E+L+ AV NLIRE K H Sbjct: 243 IDVFPSHQQSQIRAQLSLVLEGIMCQSLLPKVGGNGRAMAMEILVPNAAVRNLIREDKIH 302 Query: 297 QLPHVIQTGQQV-GMITFQQSYQHRVGEGRL 326 Q+ +QTGQ GM TF Q+ V + ++ Sbjct: 303 QIYSSMQTGQDKFGMQTFNQALATLVAQKQI 333 >UniRef50_C1AA13 Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA13_GEMAT Length = 388 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 128/331 (38%), Positives = 197/331 (59%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQ 56 +++ ++ ++ + SDLH+ + + R+ G + +A D +L L ++Q Sbjct: 9 ISLRTLLDEMIERDASDLHVSAGDRPKLRVDGDIVSATVEHVLTPRDTLQLAYSVLTENQ 68 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + +LDF+ +A R RG+ F QR +S+ +R +P +L P V+ Sbjct: 69 KKRFEMEDELDFSFGIANLSRFRGNVFKQRGCVSMVIRRIPFQIKTFAELQLPQVISSFA 128 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + GL+LVTG TGSGKSTTLAAM+ +N HI+T+EDP+E+++ + C+I QRE+G Sbjct: 129 ERPRGLVLVTGPTGSGKSTTLAAMIDKINTERRGHIITVEDPIEFIHRHRNCIINQREVG 188 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FAS L+ ALREDPDVIL+GE+RD ETI+ ALT AETGHLV ATLHT AA+A+ R Sbjct: 189 ADTKSFASALKYALREDPDVILIGEMRDLETIQAALTIAETGHLVFATLHTNSAAEAINR 248 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKT 295 ++D FP+ ++ VR QLA L +++Q L GR E+L+ TPA+ LIR+ K Sbjct: 249 IIDVFPSHQQSQVRAQLAFVLEGIITQVLLPRLTGRGRAMAAEILVVTPAIRALIRDDKV 308 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ ++Q+G++ GM T + ++ Sbjct: 309 HQIYSLMQSGKKFGMQTMNDALYQLYVSRQV 339 >UniRef50_B8D2C8 Tfp pilus assembly protein, pilus retraction ATPase PilT n=16 Tax=Firmicutes RepID=B8D2C8_HALOH Length = 360 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 148/333 (44%), Positives = 216/333 (64%), Gaps = 7/333 (2%) Query: 1 MNMEEIVALSVK-HNVSDLHLCSAWPARWRIRGRMEAAPFDT-----PDVEELLREWLDD 54 M+++E + V+ ++SDLHL R G+++ + D++ + +E + D Sbjct: 4 MDIKEFLKKFVEDQHISDLHLTVNSKPVVRYDGKLKVFEEFSGRIGFEDMQNITKELMTD 63 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 DQ E G+LDF+ S+ R R +A+ QR I+LALR++P+ P +E+LG P +L Sbjct: 64 DQWQQFQEKGELDFSYSVPGFSRFRVNAYYQRGAIALALRIIPTKIPTIEELGLPQILKN 123 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L GL L TG TGSGK+TTLA+M+ +N++ AHILTLEDP+EYL+ + ++ QRE Sbjct: 124 LALMRKGLFLCTGPTGSGKTTTLASMINIINKNRQAHILTLEDPIEYLHRHNKSIVHQRE 183 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +G+ +F GLR+ALR+DPDVIL+GE+RD ETI +AL AAETGHLVLATLHT A Q + Sbjct: 184 VGIDTTSFKEGLRSALRQDPDVILVGEMRDHETISIALEAAETGHLVLATLHTNDAPQTI 243 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREG 293 +R++D FP Q++ VR QL+ +L ++SQ+L K GR+A E+LI TPAV N+IR+G Sbjct: 244 DRIIDVFPPQQQRQVRVQLSLTLNGIVSQQLLPRKDGNGRIAALEVLIGTPAVRNVIRDG 303 Query: 294 KTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 K+HQL +QTG + GMIT + + + Sbjct: 304 KSHQLYSSMQTGGKYGMITMDNYILDLLSKSLI 336 >UniRef50_Q3A779 Tfp pilus assembly protein, pilus retraction ATPase PilT n=2 Tax=Desulfuromonadales RepID=Q3A779_PELCD Length = 347 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 142/329 (43%), Positives = 201/329 (61%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRA 58 ++ + + + SDLHL + P R G++E + LL E + + QR Sbjct: 3 KIDALFKILKEKGGSDLHLSAGNPPLIRRSGQLEPILTQVLTHEQNKALLYEIMGEAQRK 62 Query: 59 ILLENGQLDFAVSLAE-NQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 LDFA + E R R + F R G+ RL+P+ +QLG P + + + Sbjct: 63 TYETTRDLDFAYEVTELKSRFRANIFMGRLGMGAVFRLIPAEILSADQLGLPPAVLDFTQ 122 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LVTG TGSGKSTTLAAM+ ++N+ HILT+EDP+E+++ SQ+ LI QRE+G Sbjct: 123 FKKGLVLVTGPTGSGKSTTLAAMIDHVNRTRKEHILTVEDPIEFVHVSQQSLINQREVGR 182 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 H +FA+ L+AALREDPD+IL+GE+RD ETI LA+TAAETGHLV TLHT AA+ V+R+ Sbjct: 183 HTRSFAAALKAALREDPDLILVGEMRDLETIELAITAAETGHLVFGTLHTSSAAKTVDRI 242 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP +++ VR L SL+ V++Q+L R A E+L AV NLIREGKT Q Sbjct: 243 INVFPTNQQEQVRTMLGESLKGVIAQQLLRTVDGKRCAALEILSVNSAVSNLIREGKTFQ 302 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P VIQTG+ GM Q+ Q + G++ Sbjct: 303 IPSVIQTGKTQGMQLMDQAIQDLLTAGKI 331 >UniRef50_A1SFQ7 Twitching motility protein n=31 Tax=Bacteria RepID=A1SFQ7_NOCSJ Length = 430 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 130/331 (39%), Positives = 194/331 (58%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQ 56 +++++++ ++ SDLHL + P R+RG MEA D + L + + Q Sbjct: 69 LSLDDLLIHVLRVGASDLHLTTGAPPTVRLRGEMEAIEGYPTLDGEQLRRTLYGVMTERQ 128 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R + E +LDFA ++ + R R + F QR + +R++P LE LG P + Sbjct: 129 RKVFEEELELDFAYAVPGHARFRVNVFQQREHLGAVMRMIPWEIVPLEDLGMPEAVAGFS 188 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + GL+LVTG TGSGKSTTLAA++ +N+ HI+T+EDP+E+L+ + CL+ QRE+G Sbjct: 189 DLKRGLVLVTGPTGSGKSTTLAAIIDRINRTRRGHIVTIEDPIEFLHEHRGCLVNQREVG 248 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 F L+ LR+DPDVIL+GELRD +TI +ALTAAETGHLV ATLHT+ A + R Sbjct: 249 SDTHGFRDALKHVLRQDPDVILVGELRDLDTISVALTAAETGHLVFATLHTQSAQDTITR 308 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKT 295 +VD FPA+++ VR QLA +L+ V+ Q L +GR A E+++ + +IR+ K Sbjct: 309 VVDVFPAEQQQQVRTQLAATLQGVVCQTLVKTADDQGRAAAVEVMVCNSGIRAMIRDDKL 368 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ +Q G + GM T V GR+ Sbjct: 369 QQIQGALQAGARDGMQTLNAHLAALVKAGRI 399 >UniRef50_B2ULW6 Twitching motility protein n=4 Tax=Chlamydiae/Verrucomicrobia group RepID=B2ULW6_AKKM8 Length = 364 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 140/326 (42%), Positives = 206/326 (63%), Gaps = 4/326 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRAI 59 +++ V+ SDLHL P + R+ G + A + + + LL E D Sbjct: 4 IDQYFKYLVEAGGSDLHLSEGQPPKVRVNGTISAISDENLEGQAFKNLLAEICDPQAFQK 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 LE G LDFA + E R R + F Q+HG+ RL+P+ LE+LG PTV+ E Sbjct: 64 YLEEGDLDFAYEMDETSRFRCNYFKQQHGLGAVFRLIPTKIATLEELGVPTVVKEFAHMR 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +GL+LVTG TGSGKSTTLAA++ Y+N + HI+T+E+P+E+++ +++ ++ QRE+ L Sbjct: 124 SGLVLVTGPTGSGKSTTLAAIIDYINSNQARHIITVEEPIEFVHPNKKSIVTQREVPLQT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA GLRA+LRED D++L+GE+RD ETI LALTAAETG LV TLHT A++ ++R++D Sbjct: 184 PSFADGLRASLREDSDIVLVGEMRDLETISLALTAAETGLLVFGTLHTNNASKTIDRIID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 FP+ ++ VR LAGSLR V++Q L + GRVA+ E+L TPAV +IREG T ++ Sbjct: 244 VFPSDQQSQVRTMLAGSLRGVVAQLLMKRSDKPGRVAVNEILFATPAVAAIIREGATQKI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEG 324 P VI G+ +GM + ++ +G Sbjct: 304 PDVIVGGKAMGMQFMDDAIWQKLQQG 329 >UniRef50_C8W152 Twitching motility protein n=2 Tax=Bacteria RepID=C8W152_DESAS Length = 368 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 135/331 (40%), Positives = 202/331 (61%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 ++ +++ S + + SDLHL S P R+ G ++ P D++ L+ + L Q Sbjct: 16 FHVNQLLKDSKERDASDLHLTSNTPPVLRMSGGLKVLDNYRPLTPEDIKRLVYQVLSPRQ 75 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 +L + +D A+ A R R +A+ QR I+ +R L P LE LG P + L Sbjct: 76 VEVLEQKLSVDLAIGFAGIGRFRVNAYFQRGAITCVMRRLADDIPLLENLGLPESVYALC 135 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 NGL+LVTGATGSGKSTTLAA++ +N+ +I+T+EDP+EY+Y +++ +I QRE+ Sbjct: 136 DLPNGLVLVTGATGSGKSTTLAAVIDRINEKYRHNIITIEDPIEYIYFNRQSIINQRELH 195 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA LR++LR DPDVIL+GE+RD ETIR A+ AAETGHLV +TLH+R A +V R Sbjct: 196 TDVESFADALRSSLRSDPDVILVGEMRDLETIRTAIMAAETGHLVFSTLHSRDAVSSVSR 255 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 ++ FP +E+ +R QL+ SL+AV+SQ+L GR E+++ TPA+ NLIR GK Sbjct: 256 MIGVFPPEEQAQIRQQLSVSLKAVISQQLLSCAGGKGRALAAEVMVVTPAISNLIRLGKQ 315 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + + TG ++GM T +QS + G + Sbjct: 316 EHIHMALDTGTKLGMQTMEQSLEKLARAGAI 346 >UniRef50_Q2JR70 Twitching mobility protein PilT n=32 Tax=Cyanobacteria RepID=Q2JR70_SYNJA Length = 455 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 131/328 (39%), Positives = 197/328 (60%), Gaps = 3/328 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE---ELLREWLDDDQRA 58 + ++V + + SD+HL R+R RG++ + E LRE L ++Q Sbjct: 105 TLRQLVQEAYEKGYSDIHLGVGEVPRFRDRGQIVIGNYPVTTTEVFYSWLRESLPENQIR 164 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 E +LD A+ R R + F G ++ LRL+P LEQL AP VL + + Sbjct: 165 QFEECLELDTAIQYEGLVRCRVNCFVSLLGPAMVLRLIPLKILTLEQLRAPEVLKRIAEE 224 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAMV Y+N + HI+++EDP+E+++ S++ L++QRE+G+H Sbjct: 225 HKGLVLVTGPTGSGKSTTLAAMVDYINSNFAKHIISIEDPIEFVHQSKKSLVRQREVGIH 284 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + FA+ L+A+LREDPD+IL+GE+RD ET+ AL A +TGHLV TLHT A + +ERL+ Sbjct: 285 TLEFANALKASLREDPDIILIGEMRDRETVDTALKAGQTGHLVFGTLHTNSAVRTIERLL 344 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + +E++P+R QLA +L A+++Q L R A E++ NT A+ + I+ G ++ Sbjct: 345 GIYRPEEQEPMRLQLAETLVAIIAQTLVRTTDGKRTAAHEIMRNTDAIRDYIKRGAVDEI 404 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +I G GM T QS EGR+ Sbjct: 405 EELIADGSYEGMCTMNQSLFRLYQEGRI 432 >UniRef50_Q8DLE1 Twitching mobility protein n=9 Tax=Cyanobacteria RepID=Q8DLE1_THEEB Length = 446 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 133/328 (40%), Positives = 192/328 (58%), Gaps = 3/328 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEE---LLREWLDDDQRA 58 ME++V + +H SD+H+ R+R RGR+E + D E L E L Q Sbjct: 96 TMEQLVREAFEHGYSDIHVGVGEAPRFRDRGRLEITNYPVTDEETFNYWLNELLTPQQIE 155 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + + D A R+R + F G ++ LRL+P LEQL P V +L Sbjct: 156 QFRTHLEYDGAYQYEGLCRVRINIFVALKGPAMVLRLIPVKILTLEQLNLPPVFKDLCHY 215 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLILVTG TGSGKSTTLAAMV Y+N HI+++EDP+E+++ S+R LI+QRE+G+H Sbjct: 216 HKGLILVTGPTGSGKSTTLAAMVDYINTEMQKHIISIEDPIEFVHQSRRSLIRQREVGIH 275 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + F + L+A+LREDPD+IL+GE+RD ET+ AL AA+TGHLV TLHT A + +ER++ Sbjct: 276 TLKFDNALKASLREDPDIILIGEMRDRETVNTALKAAQTGHLVFGTLHTNSAVKTIERIL 335 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + + E+ P+R Q+A SL AV++Q L R A+ E++INT A+ + I G+ ++ Sbjct: 336 NLYNPDEQGPMRMQVAESLVAVIAQALVRTTDGKRAAIHEIMINTDAIKDYILRGEVEEI 395 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +I GM T Q GR+ Sbjct: 396 EAIIPQCTYDGMCTMNQCLYELYEAGRI 423 >UniRef50_A5IML1 Twitching motility protein n=11 Tax=Thermotogaceae RepID=A5IML1_THEP1 Length = 360 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 131/327 (40%), Positives = 203/327 (62%), Gaps = 5/327 (1%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQRAIL 60 +I+ + +D+H+ P +RI G + + L++ + + Sbjct: 10 KIITEAYGLRATDVHISVGCPPYYRIDGDLVPQEKYGKLTKESIMNALKDLFTEIGQPFP 69 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 + ++DF+ ++AE R+RG+ + +R +LA RL+P ++LG P +L ++ + Sbjct: 70 PKTKEVDFSFTVAEAIRVRGNLYYERKNPALAFRLIPKKIRTFQELGLPEILKTFVERKY 129 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GLILV G TGSGKSTTLAAM+ ++N++ HI+T+EDP+EY++ +++ +I QRE+G Sbjct: 130 GLILVAGPTGSGKSTTLAAMIDHINENFPHHIITIEDPIEYVFTNKKSVIHQRELGSDTD 189 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 +F +GL+ ALR+DPDVIL+GE+RD ET+ LALTAAETGHLVLAT+HT AA A ER++D Sbjct: 190 SFYNGLKYALRQDPDVILVGEMRDLETMALALTAAETGHLVLATVHTNSAASAPERIIDV 249 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLP 299 FPA ++ + QLA +L AV+ Q+L G + E+++ TPAV NLIRE K HQL Sbjct: 250 FPAHQQRQIALQLANTLIAVIYQRLVPKANGIGFTPILEIMVGTPAVRNLIRENKLHQLE 309 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 +IQ G + GM+ F + +G + Sbjct: 310 SLIQAGARHGMVLFDDALVKAALKGEI 336 >UniRef50_A8Z6P0 Twitching mobility protein n=12 Tax=Epsilonproteobacteria RepID=A8Z6P0_CAMC1 Length = 377 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 144/330 (43%), Positives = 201/330 (60%), Gaps = 5/330 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRA 58 +++ ++ V + SDLHL S + RI G + F D+E L + D Q++ Sbjct: 26 DIQTLLKTVVFNKASDLHLVSRSEPQIRIDGTLRPLEFGVLSGKDIENLCYALITDAQKS 85 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHG-ISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L N +LDFA+ L R RG+ + +G ++ A R++P P L+ L AP + ++K Sbjct: 86 ELENNKELDFAIELPNIGRFRGNYYYTMNGDLAAAFRIIPIDIPSLDDLNAPQIFKYIIK 145 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 E GLILVTG TGSGKSTTLAAM+ +N + HI+T+EDPVE+++ +++ L R IG Sbjct: 146 REKGLILVTGPTGSGKSTTLAAMLNEINLNYRKHIITVEDPVEFVHNNKKALFSHRNIGT 205 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++ L+ ALREDPD+IL+GE+RD ETI A+TAAETGHLV TLHT A Q + R+ Sbjct: 206 DTHSYSKALKFALREDPDIILVGEMRDRETISTAITAAETGHLVFGTLHTNSAIQTINRI 265 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VDSF E+ VRN L+ SL AV+SQ L GR A+ E+LIN A+ NLIRE K HQ Sbjct: 266 VDSFDGSEQLQVRNMLSVSLTAVISQSLIPKIGGGRCAVHEILINNMAISNLIRENKVHQ 325 Query: 298 LPHVIQTGQQV-GMITFQQSYQHRVGEGRL 326 + +Q QQ GM T Q+ + EG + Sbjct: 326 IYSQMQLNQQQTGMSTQTQALMKALKEGLI 355 >UniRef50_A7A8S6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A7A8S6_BIFAD Length = 601 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 130/325 (40%), Positives = 191/325 (58%), Gaps = 5/325 (1%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQRAILLE 62 + VK N SDLHL P R+ G++ A + E ++ ++ + + Sbjct: 252 IRQLVKLNASDLHLVINDPPMLRVDGKLRPAKGLSVWTKDHTYEAVKVMTNELEMERFKD 311 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 + +LD + ++ + R R + + R G+ ALR +P+ ++LG + +L GL Sbjct: 312 DLELDISFAIGDLLRFRVNVYRDRMGVCAALRTIPTEIKTAQELGIDPRIADLALLPRGL 371 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LV G TGSGKSTTLAA+V N HI+T+EDP+E+++ +RC++ QRE+G +F Sbjct: 372 VLVCGPTGSGKSTTLAAIVDKANAERADHIITIEDPIEFVHQHKRCVMSQREVGTDTKSF 431 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 A L+ ALREDPD+I +GELRD ETI ALTA ETGHLV ATLHT+ A V+RL+D +P Sbjct: 432 AEALKRALREDPDIIEVGELRDLETISTALTAVETGHLVFATLHTQDAGSTVDRLIDVYP 491 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHV 301 ++ +R Q+A +LRAV+ Q L GR E++IN PAV LIR GK HQ+ V Sbjct: 492 ENQQQQIRVQVASTLRAVIVQTLIPRASGHGRAPATEVMINNPAVAALIRSGKAHQIRTV 551 Query: 302 IQTGQQVGMITFQQSYQHRVGEGRL 326 +Q+G++ GM T Q V +G + Sbjct: 552 LQSGEKEGMHTLDQDLARLVNKGVI 576 >UniRef50_B8FGS0 Twitching motility protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGS0_DESAA Length = 366 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 134/328 (40%), Positives = 211/328 (64%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAI 59 ++++ + +H SD+H+ P RI+G R+++ P +L+ E L QR Sbjct: 4 LDKVFNAAAEHFASDIHIAPGEPVVLRIQGQLKRLKSGPLTQEQCRKLILEILTPAQRKQ 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L ++ QLDF L + R RG+A + G+S A R +P L +LG P V+ ++L + Sbjct: 64 LEQDLQLDFVYDLGDVGRFRGNAMFHQAGMSAAFRFIPPWISSLYELGLPPVVEKVLDNH 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GLILVTGA G GKSTT+AAMV Y+N H+LT+EDP+E+++ ++ ++ QR++G Sbjct: 124 QGLILVTGAAGQGKSTTMAAMVDYINTKRSHHVLTVEDPIEFVHPYKKAVVNQRQLGEGT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +++A+ LRAALREDPDVI++GELRD ETI LA++AAETGHLV+ TL A + ++R++D Sbjct: 184 LSYANALRAALREDPDVIMIGELRDLETISLAISAAETGHLVIGTLACGSAPKTIDRIID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQL 298 S+PA E++ +R L+ L+AV++Q+L + + E+LI T + NLIREGK Q+ Sbjct: 244 SYPAGEQNQIRAMLSEGLKAVVTQRLIPNMNGKTMELAVEVLIVTLPISNLIREGKVFQI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 P ++QT ++VGM++ S V +G++ Sbjct: 304 PSIMQTAKRVGMVSMDDSLIQLVEDGKV 331 >UniRef50_B9Y805 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y805_9FIRM Length = 368 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 129/330 (39%), Positives = 196/330 (59%), Gaps = 5/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQR 57 M+++ + + +DLHL P R+ G + P D+ +L ++ Q+ Sbjct: 10 MDLQAWMDRGRAMDCTDLHLTVGLPVVARMLGELTILGDEPLTKEDIHSMLATVMNRTQQ 69 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + G LDF +R +A+ Q+ ALRLL + P + L P + +L Sbjct: 70 EEY-QKGDLDFGFQDTHGYSVRVNAYYQKGNPCAALRLLRNTIPSFDDLMIPEAVRKLST 128 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTT+AAM+ ++ AHI+T+EDP+EY + ++ QRE+G+ Sbjct: 129 LPRGLVLVTGPTGSGKSTTMAAMINSISHERKAHIITIEDPIEYRFEHASSVVHQREVGV 188 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA LR+ALREDPDVIL+GE+RD ETI+ A+ AAETGHLV++TLHT A ++R+ Sbjct: 189 DVASFADALRSALREDPDVILVGEMRDFETIQAAIRAAETGHLVISTLHTNSAVSTIDRI 248 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 +D FP ++ +R QLA L+ V++Q+L V + + GR+A FE+L+ A+ ++IRE K H Sbjct: 249 IDVFPEAQQGQIRVQLASVLKGVVTQQLLVRQDQPGRLAAFEILLTNDAIASMIRENKAH 308 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ V+QTGQ+ GM V EG++ Sbjct: 309 QISSVLQTGQKAGMRQMDYDLARLVQEGKI 338 >UniRef50_Q06581 Twitching motility protein n=117 Tax=Bacteria RepID=PILT_NEIGO Length = 374 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 149/305 (48%), Positives = 199/305 (65%), Gaps = 4/305 (1%) Query: 26 ARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSA 82 R+ G M +V ++ ++D QR I +N ++DF+ L R R +A Sbjct: 53 PMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNA 112 Query: 83 FAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVG 142 F G + R +PS LE+L AP++ ++ +S G++LVTG TGSGKSTTLAAM+ Sbjct: 113 FNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMIN 172 Query: 143 YLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGEL 202 Y+N+ AHILT+EDP+E+++ S++ LI QRE+ H ++FA+ L +ALREDPDVIL+GE+ Sbjct: 173 YINETQPAHILTIEDPIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEM 232 Query: 203 RDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLS 262 RD ETI LALTAAETGHLV TLHT GAA+ V+R+VD FPA EK+ VR+ L+ SL AV+S Sbjct: 233 RDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVIS 292 Query: 263 QKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRV 321 Q L GRVA E+LI PAV NLIRE K Q+ V+QTGQ GM T QS Q V Sbjct: 293 QNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLV 352 Query: 322 GEGRL 326 +G + Sbjct: 353 RQGLI 357 >UniRef50_Q1K4H3 Twitching motility protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K4H3_DESAC Length = 481 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 141/329 (42%), Positives = 203/329 (61%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRA 58 +E+ ++ + + SDLH+ + P R G + E PF + E LL LD DQR+ Sbjct: 127 TLEDYLSFARRQGASDLHINAGSPPLLRKDGVLMTLEREPFTAQETEALLFSALDGDQRS 186 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +L E LD + R R Q G A R++ P EQL P L +L + Sbjct: 187 LLYEQLALDTCCEFSGLGRYRTCFAKQSRGWDGAFRIVDQTIPTFEQLQLPMHLKQLTEY 246 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LV G GSGK+TTLAAM+ +NQH + HI+T+EDP+EY+++++ I QR++G H Sbjct: 247 HQGLVLVAGPAGSGKTTTLAAMIQLINQHREDHIITMEDPIEYVHSAEMSHISQRQVGDH 306 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 M+F++ LRAALREDPDVI++GELRD ET LA++AAETGHLV A+LHT GAAQ + R++ Sbjct: 307 TMSFSAALRAALREDPDVIMIGELRDRETATLAISAAETGHLVFASLHTTGAAQTISRIL 366 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKTHQ 297 D FPA ++ VR+ ++ S+R ++ Q+L K EGRV E++ N A+GNLIRE + Q Sbjct: 367 DFFPADQQGQVRSMISESIRGIVCQRLMPRKEGEGRVLALEIMYNNTAIGNLIREDRMFQ 426 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 LP ++Q + GM + S Q V E ++ Sbjct: 427 LPTMMQINRDKGMCQLEDSLQTLVQEEQI 455 >UniRef50_B6BQP9 Type II Secretion PilT n=4 Tax=Proteobacteria RepID=B6BQP9_9RICK Length = 338 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 200/319 (62%), Gaps = 5/319 (1%) Query: 12 KHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLENGQLDF 68 +SD H+ S P +R G + D+++L+ ++ + A E +LD Sbjct: 12 NKKISDFHIRSGSPLAYRQTGEIIKVADTNVTAQDLKDLISMNCNEAETARFNETHELDS 71 Query: 69 AVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGA 128 AV L+ R R + + +G + LR + S P ++Q P L +++ GL+LVTG Sbjct: 72 AVMLSG-LRFRANFYKTINGPAAVLRRVESKIPDMDQFNLPQALYDIVDFHKGLVLVTGP 130 Query: 129 TGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRA 188 TGSGKSTTLAA+V +N+ ++I+T+EDPVE+++ + ++ RE+G +F++ L+A Sbjct: 131 TGSGKSTTLAAIVNEINKTRTSNIITVEDPVEFIHKDNQSIVSHREVGKQTQSFSAALKA 190 Query: 189 ALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDP 248 ALREDPDVIL+GE+RD ETI LALTAAETGHLV TLHT GA + R++D FP ++++ Sbjct: 191 ALREDPDVILVGEMRDLETISLALTAAETGHLVFGTLHTSGAPSTINRIIDVFPPEQQEQ 250 Query: 249 VRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +R Q++ SL+ V++Q+L + GRV FE++ TP V NLIRE K HQ+P ++QT + Sbjct: 251 IRAQISTSLKMVVTQRLLKTRDGQGRVGAFEIMKCTPPVQNLIREAKIHQIPSIMQTAVR 310 Query: 308 VGMITFQQSYQHRVGEGRL 326 GMIT ++S + V G++ Sbjct: 311 DGMITMEKSLEELVKSGKI 329 >UniRef50_C4ZCI9 Predicted ATPase involved in pili biogenesis, PilT-like protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZCI9_EUBR3 Length = 360 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 133/329 (40%), Positives = 203/329 (61%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQR 57 M + +I+ + + N SD+H+ P RI G++ + + LL + + + Sbjct: 9 MQIVDILKAAQQQNSSDIHIVPGNPVMLRIDGKLVPQGNQVLTNVETDNLLSPIVPQELK 68 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L E G+LDFA S+ R+R + F QR + ALR+L P +QLG P + L Sbjct: 69 DELKEKGELDFAFSVEGFSRVRANVFRQRGSYAAALRILSYDVPTPQQLGIPQSVVNLTT 128 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTGATGSGKSTTLA+++ + +I+TLEDP+EYL++ +R +++QRE+G Sbjct: 129 KMRGLVLVTGATGSGKSTTLASLIDVIASRDSKNIITLEDPIEYLHSRRRSIVEQREVGK 188 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++A+ LRAALR+DPDVIL+GE+RD ETI A+TAAETGHLV +TLHT ++ A++R+ Sbjct: 189 DTLSYAAALRAALRQDPDVILVGEMRDLETISTAITAAETGHLVFSTLHTNSSSDAIDRM 248 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 +D FP ++ +R QL+G L +++Q L GR+A FE+L+ A+ NLIRE K Q Sbjct: 249 IDVFPPHQQQQIRVQLSGVLEGIVAQHLLPMVNGGRIAAFEVLLANNAIRNLIREAKAFQ 308 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P +IQT ++ GM+ +G + Sbjct: 309 IPSIIQTSKREGMMMMDDCILQYYSQGLI 337 >UniRef50_B2V7T3 Twitching motility protein n=8 Tax=Bacteria RepID=B2V7T3_SULSY Length = 372 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 132/335 (39%), Positives = 209/335 (62%), Gaps = 9/335 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWL--DD 54 M ++EI+ +VK SD+HL A + RI+ ++ P D+ + + L + Sbjct: 1 MELDEILTKAVKLGASDIHLKVASKPKVRIKTILQTLDEYNPITVEDMTNFISKILAKSE 60 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 +++A L++NG++D + S+ R R + + QR ++ALR L ++ P+ E+L P V+ + Sbjct: 61 NKKAELIKNGEVDISYSIPTVSRFRVNIYRQRGTYAIALRALKTNIPRFEELLLPEVIRK 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + + GL+LVTG TGSGKSTTLA+M+ Y N+ + I+T+EDP+EY++ ++ I QRE Sbjct: 121 IAEEARGLVLVTGPTGSGKSTTLASMLDYRNEIFEETIITIEDPIEYVFRDKKAYIVQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 + L F++GLRAALREDPDVI++GE+RD ETI+ AL AAETGH VL+TLHT+ A + Sbjct: 181 VDLDTRDFSTGLRAALREDPDVIMVGEMRDLETIQTALRAAETGHFVLSTLHTQDAKDTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE- 292 R+++ FP +E++ +R LA L+AV+SQ+L K G V E+LINT A+ I + Sbjct: 241 SRIINMFPGEEQNHLRILLAAVLKAVISQRLIPRKDGKGVVPAVEVLINTGAITECIMDP 300 Query: 293 GKTHQLPHVIQTGQQ-VGMITFQQSYQHRVGEGRL 326 K + ++ G++ GM TF Q+ +G + Sbjct: 301 DKLLLINDYMEKGKKMYGMQTFDQAVVDLYNQGLI 335 >UniRef50_B9XBG1 Twitching motility protein n=1 Tax=bacterium Ellin514 RepID=B9XBG1_9BACT Length = 362 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 123/327 (37%), Positives = 199/327 (60%), Gaps = 3/327 (0%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRAI 59 +I+ L+ SD+H+ P +RI + A P + +++ + Sbjct: 4 FHKILKLAHDGAASDIHIKVGTPVVFRINRSLVAIECPIPTEEWMNNVVKNIVPVHLHKK 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L E + DF+ + R R + F QR +LA+RL+ ++ P E LG P V+ ++ +S Sbjct: 64 LEEERETDFSYLEPGSGRFRTNVFQQRGSFALAMRLVKANVPSFETLGLPDVIKKIAESP 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 G++L+ G+TGSGKSTTLAAM+ ++N + HI+TLEDP+EY++ +C+I+QRE+GL Sbjct: 124 RGIVLLAGSTGSGKSTTLAAMIEHVNAVSKKHIVTLEDPIEYVFEDNQCVIEQREVGLDT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F L++ALR+DPD+I++GE+RDS + A++AA+TGHLVL+TLHT A Q+V R++D Sbjct: 184 RSFQGALKSALRQDPDIIMVGEMRDSVSFSAAMSAADTGHLVLSTLHTTTAGQSVGRILD 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 F A E++ +R Q+AG+L+AV+ Q++ E++INT V +I + + +L Sbjct: 244 FFQADEREQIRRQIAGTLQAVICQRMVPTLTGTMTPACEIMINTSTVKKMIEDNRIEKLH 303 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 I+TGQ GM F Q+ V EG++ Sbjct: 304 AAIETGQDDGMQNFNQALFALVKEGKI 330 >UniRef50_A5FPX9 Twitching motility protein n=4 Tax=Dehalococcoides RepID=A5FPX9_DEHSB Length = 371 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 130/328 (39%), Positives = 198/328 (60%), Gaps = 5/328 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQ 56 M++ +++ + + SDLHL + P R+RG +EA D++ + ++ Sbjct: 1 MDVIKLIYEAEEKKGSDLHLVAQSPPLVRVRGDLEALNGYEQLQPADIKTAFEQLTTHEE 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R + +LDF SL RLR +A QR ISLA+RLLP + P + +L P + +L+ Sbjct: 61 RETFYQEWELDFGYSLDGVGRLRCNAAMQRGAISLAIRLLPPNIPTISELELPDICQKLV 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GL++VTG TGSGKSTTLAAM+ +LN H++T+EDP+EY++ +C + QR++G Sbjct: 121 TKPRGLVIVTGPTGSGKSTTLAAMIQHLNNTESKHVVTIEDPIEYVHPCIKCAVTQRQLG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 ++F L+ LR++PDVI++GE+RD +T LT AETGHLVL+T H A QA+ER Sbjct: 181 SDTLSFGHALKHVLRQNPDVIMVGEMRDLDTAAAVLTIAETGHLVLSTSHAPSAYQALER 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKT 295 ++D FP E+ + +LA + VL Q L +GR+ E+++ +PAV NLIREGK Sbjct: 241 IIDLFPPHERHLAQTRLASLIEGVLCQTLIPRSNTDGRIVAVEIMLGSPAVRNLIREGKF 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGE 323 +QLP+VI+T GMIT ++ + Sbjct: 301 YQLPNVIRTSHDEGMITMDEALVELYRQ 328 >UniRef50_Q1V0I1 Type II Secretion PilT n=3 Tax=root RepID=Q1V0I1_PELUB Length = 337 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 201/319 (63%), Gaps = 5/319 (1%) Query: 12 KHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLENGQLDF 68 +SD H+ + WP +R G + + D+++L+ ++ + E +LD Sbjct: 12 NKKISDFHIRTGWPLAFRQTGEIHKIQEIVVKEQDLQDLISTNCNETEMKKFSETHELDS 71 Query: 69 AVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGA 128 +V+L+ R R + + G + LR + S P+++Q P VL +++ GL+LVTG Sbjct: 72 SVTLSG-LRFRANFYKTIQGPAAVLRRVESVIPEMDQFDLPQVLYDIVDMHKGLVLVTGP 130 Query: 129 TGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRA 188 TGSGKSTTLAA+V +N+ ++I+T+EDPVE+++ + ++ RE+G TF+S L+A Sbjct: 131 TGSGKSTTLAAIVNEINKTRTSNIITVEDPVEFIHKDLKSIVSHREVGKQTKTFSSALKA 190 Query: 189 ALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDP 248 ALREDPDVIL+GE+RD ET+ LALTAAETGHLV TLHT GA + R++D FP +++ Sbjct: 191 ALREDPDVILVGEMRDLETVSLALTAAETGHLVFGTLHTSGAPNTINRIIDVFPPEQQAQ 250 Query: 249 VRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +R Q++ SL+ V++Q+L K GR A FE++ TP + NLIRE K HQ+P ++QT + Sbjct: 251 IRAQISSSLKMVVTQRLLKTKDGQGRCAAFEVMKCTPPIQNLIREAKIHQIPSIMQTSVR 310 Query: 308 VGMITFQQSYQHRVGEGRL 326 GMIT +S + V G++ Sbjct: 311 DGMITMTKSLEELVKAGKI 329 >UniRef50_B9LZ76 Twitching motility protein n=98 Tax=cellular organisms RepID=B9LZ76_GEOSF Length = 356 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 144/328 (43%), Positives = 205/328 (62%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRAI 59 ++ + + + SDLHL + P +R+ G ME F + D+ +L E L + Q A Sbjct: 4 IDALFKMMNEQGASDLHLSTGSPPIFRLNGEMERLNFKSLGHEDLRSILYEILSETQIAD 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + LDFA S+ R RG+ Q GI+ R++PS +QL P + +L + Sbjct: 64 FEKRKDLDFAYSVPGIARFRGNMLMQHRGIAAVFRIIPSKILTADQLNLPEGVRKLTALK 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLAAM+ +N HILTLEDP+E+++ ++ L QR+IG H Sbjct: 124 KGLVLVTGPTGSGKSTTLAAMIDLINSTRREHILTLEDPLEFIHENKMSLFNQRQIGEHS 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+ LRAALREDPDVIL+GE+RD ETI LA++AAETGHLV TLHT AA+ V+R++D Sbjct: 184 ESFAAALRAALREDPDVILVGEMRDLETISLAMSAAETGHLVFGTLHTSSAAKTVDRIID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 FP ++ VR L+ SL+ V+SQ+L + GR A E+++ TPA+GNLIREGKT Q+ Sbjct: 244 VFPKDAQEQVRAMLSESLKGVISQQLLRNADGKGRSAALEIMMGTPAIGNLIREGKTFQI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 P ++QT ++ GM Q + ++ Sbjct: 304 PSIMQTAKKDGMQLMDQHILDLLKTKKV 331 >UniRef50_Q2SCC2 Tfp pilus assembly protein, ATPase PilU n=58 Tax=Bacteria RepID=Q2SCC2_HAHCH Length = 404 Score = 382 bits (982), Expect = e-105, Method: Composition-based stats. Identities = 113/329 (34%), Positives = 195/329 (59%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQR 57 M + + + K++ SDL+L + P + G++ + P + E+ +D++QR Sbjct: 1 MEFNQYLTVLAKNDGSDLYLSTGAPPCAKFHGKLKPIDKTPLPPGRIMEIANAIMDEEQR 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ A S+ + R R + F QR+ +S+ R + + P + LG P +L E+L Sbjct: 61 EQFAHELEMNLAYSIPQVGRFRVNIFKQRNEVSIVARNIVTDIPNADSLGLPPILKEVLM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 S+ GLIL GATGSGKST+LAA++ + N ++ HI+T+EDPVE+++ ++ +I QRE+G+ Sbjct: 121 SKRGLILFVGATGSGKSTSLAALIDHRNSNSGGHIITIEDPVEFIHKHKKSIINQREVGV 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ + L+ LR+ PDVIL+GE+RD ET+ AL AETGHL ++TLH + QA++R+ Sbjct: 181 DTRSYHNALKNTLRQAPDVILIGEIRDRETMEHALAFAETGHLCISTLHANNSNQALDRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + ++ + L+ +LRA +SQ+L R A E+L+ TP V LI G Sbjct: 241 INFFPEERRNQLLMDLSLNLRAFVSQRLVPTIDGKRTAAIEILLGTPTVSELILRGDIDG 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++Q + +GM TF + V + ++ Sbjct: 301 IKEIMQKSENIGMQTFDAALFKLVQQEKI 329 >UniRef50_B8GP69 Type II secretion system protein (Twitching motility protein) n=3 Tax=Proteobacteria RepID=B8GP69_THISH Length = 402 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 124/329 (37%), Positives = 200/329 (60%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M++E + L + N SDL PA +I G M V ++ E +D+ + Sbjct: 1 MSIEPYLKLMAQKNASDLFFTVGAPASVKIEGEMRPISRHTMAPGSVRDMAYELMDERKI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ +S+ E R R + + QR +S+ +R + S P +EQL P VL +L+ Sbjct: 61 QEFERTREMNIGISVEELGRFRVNIYVQRGEVSMVIRYIKSDVPSIEQLHLPHVLKDLVL 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 ++NGL+LV G+TGSGKST+LAAM+ Y N ++ HILT+EDP+EY + ++ ++ QRE+GL Sbjct: 121 NKNGLVLVVGSTGSGKSTSLAAMLDYRNANSYGHILTVEDPIEYSFTHRKSIVGQREVGL 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++ + LR A+RE PD+I++GE+RD ET+ ALT A+TGHLVL+TLH A QA++R+ Sbjct: 181 DTLSYENALREAMREAPDMIMIGEIRDRETMEAALTYADTGHLVLSTLHAVNANQALDRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + + L+ +++ ++SQ+L V K R+ E+L+NTP + LIR+G+ Sbjct: 241 INFFPPDSRRQILMDLSLNIKGIMSQRLVVTKDGKRMPATEVLLNTPYISELIRKGEISG 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +I+ G VGM TF QS G + Sbjct: 301 IKDIIEKGASVGMHTFDQSLFELYKAGTI 329 >UniRef50_C3WB33 Twitching motility protein n=2 Tax=Fusobacterium RepID=C3WB33_FUSMR Length = 345 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 132/329 (40%), Positives = 211/329 (64%), Gaps = 4/329 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M EE++ + + SD+HL +R+ G + + + ++ L + +R Sbjct: 8 MLFEELLTSAREQRASDIHLVYGELPTFRVNGELIKIGDELVNKRFLSLIVDLVLSERER 67 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 I +N +LD + + N R RG+ +R I +++RL+ + +E+LG P +L +L++ Sbjct: 68 NIFYQNRELDCSFEDSNNLRYRGNFHWERGNIGISIRLIENSIKSMEELGLPKILKKLIE 127 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 S+ GLIL+TG +GSGKSTTLA+MV LN + +I+TLEDP+EYL+ S++ LI+QREIG Sbjct: 128 SKKGLILITGPSGSGKSTTLASMVEELNSTKNLNIITLEDPIEYLFKSKKSLIRQREIGR 187 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA GL++ LR+DPDVI++GELRD E+I ALTA+ETGHLVL TLHT A++ + R+ Sbjct: 188 DTHSFAQGLKSVLRQDPDVIMVGELRDRESIAAALTASETGHLVLGTLHTNSASETISRI 247 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VD FP +E++ +R +LA +L+ V+SQ+L K E R +E+L++ PAV NLI K +Q Sbjct: 248 VDVFPTEEQNEIRVKLATTLKGVVSQRLVRTK-ERRRGAYEILLSIPAVSNLILGNKLNQ 306 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + VI++ +++GMI + + + + Sbjct: 307 IDSVIESNKKMGMILMRNYLEDLYSQNII 335 >UniRef50_A6C2Q7 Twitching motility protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2Q7_9PLAN Length = 356 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 4/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M M +++ +V N SD+ L +RI G ++ P D + +L + L+ Q+ Sbjct: 1 MEMNDLLHAAVDSNASDILLAIDAAPMFRIDGTLKKTALEPLDPVTISDLCDQVLNPQQK 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 IL +DFA+++ R R + QR + A+R + L L P V+ EL + Sbjct: 61 EILDRQKDVDFAITIPRLGRFRFNIHVQRGTYAAAIRRFSNEICSLSSLDLPPVVEELTR 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILVTG TGSGKSTTLAAMV +NQ HI+TLEDP+EY + R LI+QREIG Sbjct: 121 LKTGLILVTGQTGSGKSTTLAAMVEAINQRDAKHIITLEDPIEYQFQHGRSLIEQREIGE 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 C FASGL+ LR+DPDVIL+GELRD +TIR+AL AAETGHLVL++LH AA V+RL Sbjct: 181 DCPGFASGLKHVLRQDPDVILIGELRDLDTIRVALQAAETGHLVLSSLHVSSAAGVVDRL 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 V+ FP +E+ VR+ LA +LR V++QKL GRVA E+++ AV IRE +H Sbjct: 241 VEVFPPEEQSQVRSHLAETLRGVITQKLLPAADGNGRVAALEIMLMNRAVQTSIRESTSH 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P +I T +++GM T +Q+ + ++ G++ Sbjct: 301 LIPGIISTSRRMGMQTMEQALKEQLLNGKV 330 >UniRef50_C1A6T5 Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6T5_GEMAT Length = 444 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 131/331 (39%), Positives = 191/331 (57%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEEL----LREWLDDDQ 56 M +E I+ +V SD+H+ + R RI GR+ E+ L ++D Sbjct: 1 MAIERIIKAAVDRGASDVHIKAGDVVRARIDGRLVVLTKQALTAEQTRAIALHLMVNDTD 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 RA + D + + R R + QR S+ +R++P P + L P+VL + Sbjct: 61 RANIDTLKDHDCSWATPGVGRFRVNIMRQRSAHSIVMRVIPEQVPTVSSLHLPSVLTRIA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +E G++LVTG TGSGKS+++AA+V +N + HILTLE+P+E+++A R + QRE+G Sbjct: 121 HTERGMVLVTGVTGSGKSSSMAALVHEINASYEKHILTLENPIEFIHADLRSSVTQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + TF GLRAALR+DPDVIL+GE+RD+ETI A+ AAETGHL+++TLHT A + R Sbjct: 181 IDTDTFRMGLRAALRQDPDVILIGEMRDAETIDTAMKAAETGHLLISTLHTPDAQSTILR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 +V FP +E+ VR +LA SL AV+SQ+L K GRV E++I T + +LI EG Sbjct: 241 IVAMFPPEEQLVVRTRLAESLHAVVSQRLLPRKNGQGRVVAAEVMIVTSTIRDLIAEGNI 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ I G Q GM TF Q V + Sbjct: 301 AEIRDYIADGAQYGMQTFDQHLAELVTTDEI 331 >UniRef50_B2SPL0 Tfp pilus assembly protein n=67 Tax=Proteobacteria RepID=B2SPL0_XANOP Length = 377 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 122/329 (37%), Positives = 192/329 (58%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQR 57 M++ + L + N SD+ L + P +I G++ V+++ +D+ Q Sbjct: 1 MDIGYFLKLMTEKNASDMFLTTGAPVHIKIEGKLYPLGNTGLPPGMVKKIAYSLMDEGQV 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +L+ A++L + R R +AF QR + + +R + S P +E+L P VL +++ Sbjct: 61 PQFERELELNIAIALPDAGRFRVNAFKQRGEVGMVIRAIRSRIPSIEELHLPQVLKDIIM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LV G+TGSGKST+LAAM+ + N HILT+EDP+EYL+ + ++ QRE+GL Sbjct: 121 APRGLVLVVGSTGSGKSTSLAAMIDHRNSTTTGHILTIEDPIEYLHKHKMSIVNQREVGL 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 F S L+ A+RE PDVIL+GE+ D+ET+ A+ AETGHL LATLH+ A Q +ER+ Sbjct: 181 DTHAFQSALKNAMREAPDVILIGEILDAETMEAAIAFAETGHLCLATLHSNNADQTIERI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + V LA +LRAV+SQ+L R E+L+NTP + +L+R G+ H+ Sbjct: 241 LNFFPESAHNNVLMNLALNLRAVISQRLVKGLDGRRRPATEVLLNTPMIRDLLRRGQVHE 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++ + GM TF Q V G + Sbjct: 301 VKQAMEESLEEGMQTFDQCLFRMVKSGEI 329 >UniRef50_B2ULW5 Twitching motility protein n=17 Tax=cellular organisms RepID=B2ULW5_AKKM8 Length = 360 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 8/332 (2%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM-----EAAPFDTPDVEELLREWLDDDQ 56 +++ + L ++ SD+HL WR G++ EA D E L R +L+D + Sbjct: 8 HVDGYLKLGQDYDCSDIHLAVNSRPTWRRFGQLLPIWEEAPNLTPQDTEVLARGFLEDPE 67 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTV-LPEL 115 L + G +DFA + + R R S QR G + R++ + +E++G PT + L Sbjct: 68 WNRLQQRGDVDFAYA-NDFGRYRASVVKQRLGYDICFRIINTRVRTMEEIGLPTEYVVPL 126 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + NGLILVTG+ GSGKSTTLA++V ++NQ HI+TLEDP+EYL S+ C + QRE+ Sbjct: 127 TRYTNGLILVTGSVGSGKSTTLASIVDFINQDRHDHIITLEDPIEYLIPSKNCHVNQREV 186 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 H +FA LR ALREDPDVI++GE+RD ETI LALTAAETGHLVL TLHT AA+ V+ Sbjct: 187 HKHTESFARALRGALREDPDVIMVGEMRDLETISLALTAAETGHLVLGTLHTGSAARTVD 246 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++D FP +++D +R ++ SLR ++SQ+L GR E+L+NTPA+ N IREGK Sbjct: 247 RVLDVFPVEQRDQIRIMVSESLRGIISQQLVPRADGNGRALAIEMLVNTPAIANCIREGK 306 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 T +P IQTG+ GMI S + G + Sbjct: 307 TFMIPGCIQTGKAQGMILMDDSLRALHQAGLI 338 >UniRef50_UPI0001C37050 pili biogenesis protein PilT-like ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37050 Length = 366 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 132/332 (39%), Positives = 195/332 (58%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA-----PFDTPDVEELLREWLDDD 55 +N+ +I+ SDLH R+ G + D ++ E+ R+ ++ Sbjct: 4 INIHKILDEVRVLGCSDLHFTDRIAPVVRLNGNLRTMRTQYPEMDAEEIMEIARQMTNEK 63 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 Q+ + DF+ + N R R + + Q+ ++A+RLL + P L+ LG P++L E Sbjct: 64 QQTSINNGKDTDFSFTTRSNYRHRVNVYFQKGKPAIAIRLLRNDIPTLDDLGLPSILAEF 123 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 GL+LVTG TGSGKSTTLA M+ ++N + AHI+T+EDP+EY++ +RC++ QREI Sbjct: 124 AMRPRGLVLVTGPTGSGKSTTLAGMIDHVNLNKSAHIITIEDPIEYVHEHKRCMVNQREI 183 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +F+ LRAALREDPDVIL+GE+RD ETI+ A+TAAETGHLV++TLHT AA + Sbjct: 184 GADVDSFSLALRAALREDPDVILVGEMRDFETIQAAVTAAETGHLVMSTLHTTSAADTIN 243 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++D +P ++ +R QLA +L V+SQ L K GR+A E+L T AV IR+ K Sbjct: 244 RIIDVYPEHQQQQIRTQLANNLVGVISQTLIPKKDGSGRIAAMEILRVTDAVSAQIRDNK 303 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 H + IQTG+ GM+ V + Sbjct: 304 IHLIQSTIQTGKAEGMMCLDFELARMVRNNVI 335 >UniRef50_A9BA92 Tfp pilus assembly protein, pilus retraction ATPase PilT n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BA92_PROM4 Length = 347 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 142/330 (43%), Positives = 201/330 (60%), Gaps = 4/330 (1%) Query: 1 MNM-EEIVALSVKHNVSDLHLCSAWPARWRIRG--RMEAAPFDTPDVEELLREWLDDDQR 57 M++ EIV+ ++K SD+HL P R+ ++ + D++ L+ E L ++ Sbjct: 1 MSISREIVSYAMKAGSSDIHLEEGSPIAVRVNSDIKISGQKLRSQDMDNLMMELLGKEKV 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E G LD + S+ RLR +A+ L LRLLP + P+ + LG P +L K Sbjct: 61 NEFNELGDLDSSTSIEGLSRLRINAYIANEKRCLTLRLLPDNLPKWQDLGLPEPFIKLSK 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS-QRCLIQQREIG 176 E G++L TG TGSGKSTTLAA + + + HILT+EDP+E+++ + +I QRE+ Sbjct: 121 LERGMVLCTGPTGSGKSTTLAAFINCILETQKRHILTIEDPIEFIFEHTENSIIHQREVK 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA L+AALREDPDVI +GE+RD ETI+LA+TAAETGHLVL TLHT AA+ VER Sbjct: 181 RDTDSFARALKAALREDPDVIYIGEMRDLETIQLAITAAETGHLVLGTLHTSSAAKTVER 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 +VD FP +++ R Q++ SL ++SQ L + R +ELLINTPA+GNLIRE K Sbjct: 241 IVDVFPGDQQEQARLQVSTSLAGIMSQTLCKNTLGKRSLAYELLINTPAIGNLIRERKVS 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ +QTG GM T +Q V +G + Sbjct: 301 QIYSQLQTGSNDGMNTLEQCLNDLVAQGLI 330 >UniRef50_C2LMJ4 Tfp pilus assembly protein PilT n=2 Tax=Proteus mirabilis RepID=C2LMJ4_PROMI Length = 339 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 168/329 (51%), Positives = 221/329 (67%), Gaps = 5/329 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 MNME+++ SVKHN SDLHLC R RI G + P + + + + +L Q Sbjct: 1 MNMEKLIIYSVKHNASDLHLCCGDVPRLRINGVLYQQNQCKPITSDTLLKWITPYLTTAQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + GQ+D A++LAE QRLR + F Q+ GIS LR++ S P L L P + LL Sbjct: 61 LQFFGKEGQVDTAITLAEGQRLRVNLFRQQLGISAVLRVINSQLPALTSLRVPKSITALL 120 Query: 117 KS-ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + NGLILVTGATGSGKS+TLAAM+ YLNQH HILTLE P+E++Y +++ +IQQREI Sbjct: 121 DNVSNGLILVTGATGSGKSSTLAAMIDYLNQHKRQHILTLEAPIEFIYTNKQSIIQQREI 180 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G AS + AALR+DPDVI+LGELRD E+I++AL AAETGHLVLATLHT+G Q +E Sbjct: 181 GRDVQNIASAIEAALRQDPDVIMLGELRDLESIKMALIAAETGHLVLATLHTQGVVQTLE 240 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R+ + F + E+ + QLAGSL+A++SQ+L Q GRVALFE++ T + +LIREGK Sbjct: 241 RVTNVFSSNERQWISAQLAGSLKAIISQQLVPATQGGRVALFEVMYMTQGIAHLIREGKY 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 HQ+ ++QTG + GM TF S Q R EG Sbjct: 301 HQVTTLMQTGFEYGMQTFTLSRQQRQYEG 329 >UniRef50_B4D003 Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D003_9BACT Length = 359 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 130/328 (39%), Positives = 191/328 (58%), Gaps = 6/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +++ + V SDLHL P + R G + ++ ++ E D+ A Sbjct: 4 IDQFFEVLVNAGASDLHLAEGQPPKIRRHGEVMPIRNEELTNEEMAYMMSEIAGPDRWAR 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 LE G LDFA + E+ R R + Q G RL+P+ L+QLG P V+ E Sbjct: 64 YLEVGDLDFAYEMDEHSRFRCNYLKQTRGFGCVFRLIPTKILTLDQLGIPPVVKEFGHLR 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLAA++ Y+N + HI+T+E+P+E+++ +++ +I QRE+ + Sbjct: 124 GGLVLVTGPTGSGKSTTLAALIDYINVNFTRHIITVEEPIEFVHKNKKSIITQREVPENT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F GL+AALRED D++L+GE+RD ETI+LALTAAETG LV TLHT A + V+R++D Sbjct: 184 PSFPQGLKAALREDADIVLVGEMRDLETIQLALTAAETGLLVFGTLHTNNARKTVDRMID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDK---QEGRVALFELLINTPAVGNLIREGKTH 296 FP+ ++ VR LA SLR V++Q L GR+A+ E+L+ A +IREG T Sbjct: 244 VFPSDQQAQVRTMLAASLRGVVAQLLLKKTAEVGGGRLAVNEILVVNSAASAIIREGATQ 303 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEG 324 +L VI G GM + + +G Sbjct: 304 KLQDVIVAGGGSGMQFMDDAIWKVMQQG 331 >UniRef50_C4Z961 Predicted ATPase involved in pili biogenesis, PilT-like protein n=5 Tax=Bacteria RepID=C4Z961_EUBR3 Length = 358 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 127/331 (38%), Positives = 193/331 (58%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQR 57 M++++I+ + + SD+ + + P ++ +G ME + E + +R Sbjct: 6 MDVKKILKEATDNGASDIFIVAGRPLTYKSKGVMECLNEIRMIPKETFEFVTSIYALAER 65 Query: 58 AI--LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 I E G DF+ ++ R R S F QR S +R++ P+ L P + EL Sbjct: 66 DISKFEETGDDDFSFAIPGVSRYRVSTFKQRGSYSAVIRVISFTLPKPSDLHIPDSVMEL 125 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 ++ NG++LVTG GSGKSTTLA ++ +N + HI+TLEDP+E+L+ +C++ QREI Sbjct: 126 AETNNGMVLVTGPAGSGKSTTLACIIDQINHEKEEHIITLEDPLEFLHRHDKCIVSQREI 185 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 ++ + LRAALR+ PDVILLGE+RD ETI A+TAAETGHL+ ++LHT GAA ++ Sbjct: 186 NTDTESYLTALRAALRQSPDVILLGEMRDYETINTAVTAAETGHLIFSSLHTIGAANTID 245 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R++D+FPA ++ + QLA L+AV+ QKL V FE+++ TPA+ NLIREGK Sbjct: 246 RIIDAFPASQQHQIAIQLASVLQAVVCQKLLPATNGEMVPAFEIMVLTPAIRNLIREGKV 305 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ +I T MI S + G + Sbjct: 306 HQIDGIIYTSAAENMIAMDTSIFNLYKAGVI 336 >UniRef50_C3RLB1 Twitching motility protein n=3 Tax=Bacteria RepID=C3RLB1_9MOLU Length = 347 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 136/327 (41%), Positives = 200/327 (61%), Gaps = 4/327 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTP--DVEELLREWLDDDQRAIL 60 + EI+ S + SD+H+ + + R G + P + P ++ +++ E + + Sbjct: 2 INEILKASRNNKCSDIHISANTGIKVRQDGLLADYPIEFPQNELIKMIMELIPKRLIDNV 61 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 + DF + E R R + + ++ I A+R++ LEQL PTVL ++ Sbjct: 62 DRHEDADFVYHVWEE-RYRVNIYYEQTNICAAIRVINDEILTLEQLEMPTVLNQIAMEPR 120 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GL+LVTG TGSGKSTTLAAM+ +N+ + HILT+EDP+EY+Y ++ LI QREIG Sbjct: 121 GLVLVTGPTGSGKSTTLAAMIDLVNKQRNCHILTIEDPIEYVYKQKQALIHQREIGEDVK 180 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 F LR+A+REDPDVIL+GE+RD ETI +T AETGHLV +TLHT GAA+ ++R++D Sbjct: 181 DFDMALRSAMREDPDVILVGEMRDYETISAVITLAETGHLVFSTLHTIGAAKTIDRIIDI 240 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLP 299 FP ++ VR QL+G L AV++Q L GRVA E++ AV NLIR+ K HQ+ Sbjct: 241 FPQHKQAQVRTQLSGVLNAVITQTLLPHASGIGRVAAVEIMRANDAVRNLIRDNKGHQIN 300 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 VIQTG++ GMI+ + + V EG++ Sbjct: 301 SVIQTGKKEGMISLNHALANLVREGKI 327 >UniRef50_A1AM74 Twitching motility protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AM74_PELPD Length = 361 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 125/328 (38%), Positives = 194/328 (59%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQRAI 59 +E ++ V+ SD+HL R+R+ G ++A F + VE + +++ QR Sbjct: 8 LEVLLRTCVELGASDMHLSGGERVRFRVNGLLQAHGNELFSSDAVEAMATAIMNEHQRKE 67 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 D S ++ +R R + F + ++ +R L LE+LG P+ L EL Sbjct: 68 FFTRLTADIGYSSSDGERYRVNCFREMCKPAMTVRHLDQRLRSLEELGLPSRLRELAYLH 127 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +GL+LVTGATGSGKS+TLA ++ +N+ D HILT+EDPVE+++ SQR L+ RE+ Sbjct: 128 SGLVLVTGATGSGKSSTLAMLLNEINRTRDCHILTVEDPVEFIHTSQRSLVHHREVHTDV 187 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++A +RAA+REDPDVI++GE+RD ET++ +L AAETGHLV +TLHT A A+ER + Sbjct: 188 PSYAEAVRAAMREDPDVIMVGEMRDLETMQASLAAAETGHLVFSTLHTGEAVGAIERFIG 247 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 F +E+ R+++A LRA+++Q+L + RV ELL+ A NLI+ +T QL Sbjct: 248 YFSGEEQAVARHRIAMVLRAIVAQRLVIGLDGRKRVPAVELLMVNTAAANLIQTSRTRQL 307 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++TG + GM T Q V ++ Sbjct: 308 YSMMETGAKDGMWTLDQDLARLVKSNKI 335 >UniRef50_C9RN76 Twitching motility protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RN76_FIBSS Length = 366 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 124/332 (37%), Positives = 196/332 (59%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 + +E+++ V SDLHL P +RI G R+ D+ ++ L + ++ DQ+ Sbjct: 4 LRIEQLLREMVNRKASDLHLRVGVPPVYRINGALQRLFDVRIDSAMMDSFLDDIMNRDQK 63 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 N + DFAV + R R + F QR I++ +R + + P E+L P ++ +L Sbjct: 64 QRFEANKECDFAVGARDMGRFRVNVFRQRGTIAVVIRHIKAVIPPFEELHLPEIIRDLAL 123 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LVTG TGSGKSTTLA+M+ Y+NQ +++T+EDP+EYLY +I QREIG+ Sbjct: 124 TRRGLVLVTGTTGSGKSTTLASMIDYINQKESVNVITVEDPIEYLYRDNVAIISQREIGV 183 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++A+ LRAALR+DPDV+L+GE+RD ET+++ALTAA+TGH+V AT+HT A + + R+ Sbjct: 184 DTLSYANALRAALRQDPDVLLVGEIRDLETMQIALTAADTGHMVFATIHTTNAVETIHRV 243 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE-GKT 295 + +P + D +R LA L ++S +L K GRV E+L+NT A+ I++ K Sbjct: 244 LSMYPPHQHDEIRLLLAEVLVGIISLRLLPTKDGKGRVPAAEILVNTGAIKEYIQDKNKI 303 Query: 296 HQLPHVIQTGQ-QVGMITFQQSYQHRVGEGRL 326 + + G Q TF Q+ ++ Sbjct: 304 DMVEQAVAEGHIQYHSQTFDQALLELYQNEQI 335 >UniRef50_C0D956 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D956_9CLOT Length = 349 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 148/327 (45%), Positives = 197/327 (60%), Gaps = 6/327 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQR 57 M +EE++ + SDLHL P R+R GR M+ D E RE + Sbjct: 1 MTIEELIRTAGDAGGSDLHLVKGLPPRFRRDGRLEDMDGEMLTDTDCEGYARELAGEAYE 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 I E G+LD A + A R+R + F Q+ IS A+RLL P+L+ LG P + Sbjct: 61 RI-REIGELDLAGTFAG-IRVRINLFRQQGHISAAIRLLSGRIPELDSLGLPPAVSRFPS 118 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILVTG TGSGKSTTLAA++ +N+ HI+TLEDPVEY+Y +C++ QR+IG Sbjct: 119 MKRGLILVTGETGSGKSTTLAAILNEINRTRKGHIITLEDPVEYIYTPDQCVVNQRQIGT 178 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ GLRAALREDPDVIL+GE+RD +TI ALTAAETGHLV TLHT AA +++R+ Sbjct: 179 DTRSYGDGLRAALREDPDVILIGEMRDLDTIETALTAAETGHLVFGTLHTNSAADSIDRI 238 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLE-VDKQEGRVALFELLINTPAVGNLIREGKTH 296 V+ FP + +R QL+ SL AVLSQ+L +GRVA EL++ TPA+ NLIRE KT Sbjct: 239 VNVFPDGLQRQIRLQLSTSLLAVLSQQLVERKNGKGRVAACELMMVTPAIRNLIREAKTP 298 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGE 323 Q+ + + Q G IT + Sbjct: 299 QIASSMASAAQEGSITMDNFLVRLYKD 325 >UniRef50_A5GMV2 Twitching motility protein n=3 Tax=Synechococcus RepID=A5GMV2_SYNPW Length = 430 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 136/328 (41%), Positives = 191/328 (58%), Gaps = 4/328 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRA 58 ++E+IV ++ SD+HL R+R RG M E D + LRE L Sbjct: 80 SLEDIVQIAHAKGHSDVHLGVGEIPRFRARGEMLQTEWPVTDPGTFQGWLREILSPQHID 139 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + + + D + + R+R + G ++ LRL+P LE L P VL EL Sbjct: 140 LFQQTKEFDGSHAFPF-VRVRINLLDSLLGPAMVLRLIPQTILTLEDLNLPDVLRELASR 198 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAM+ ++N+H HILT+EDPVE+++ SQR LI+ RE+GLH Sbjct: 199 PKGLVLVTGPTGSGKSTTLAAMIDWINRHQTRHILTIEDPVEFVHQSQRSLIRHREVGLH 258 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + F + LRAALREDPDVIL+GE+RD ET+ AL A++TGHLV TLHT A + VER++ Sbjct: 259 TLQFHNALRAALREDPDVILVGEIRDRETLSTALEASQTGHLVFGTLHTNSAVKTVERVL 318 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 FP +++D VR L+ SL V++Q L R A ++LINT A + I+ G + Sbjct: 319 GLFPPEDQDSVRRSLSESLLGVIAQGLIRTNDGKRAAYHDILINTEACKDYIQRGALDDV 378 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++ GM+T QS V R+ Sbjct: 379 EEIMERSGFDGMVTSNQSLLALVEAERI 406 >UniRef50_A7I2W5 Twitching mobility protein n=7 Tax=Epsilonproteobacteria RepID=A7I2W5_CAMHC Length = 402 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 129/329 (39%), Positives = 186/329 (56%), Gaps = 6/329 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQRAI 59 + + + VKH SDLH+ S R RI G + F D +L +E L + Sbjct: 23 LNQYLDYLVKHGGSDLHIKSNSVIRGRINGELVKFSTQIFTAADGIQLAKELL-LTRFKE 81 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L+EN +DF SL + R R + F Q GIS R +P P +E+L P L ++ Sbjct: 82 LVENKSIDFTYSLNSDYRFRVNIFFQIDGISAVFRTIPVKIPTIEELKLPKTLGKICDET 141 Query: 120 -NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 G+IL+TG TGSGK+TT+A+M+ +N +HI+T+EDPVE+++ +C+I QR +G Sbjct: 142 TRGIILLTGPTGSGKTTTIASMINRINHQRTSHIVTIEDPVEFVFKDDKCIINQRALGED 201 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 C TFA LRAALREDPD+I +GE+RD TI AL AAETGHLV +TLHT A + + R++ Sbjct: 202 CNTFADSLRAALREDPDIIFVGEMRDLVTIETALNAAETGHLVFSTLHTVDAKETIGRII 261 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 F E++ ++ LA L AV+SQ+L RVA+ E+L + ++I EG+ ++ Sbjct: 262 GMFEPSEQERIKMTLAAVLEAVISQRLAKTVDGKRVAVVEILRKNTRIKDMILEGRDGEI 321 Query: 299 PHVIQTGQQ-VGMITFQQSYQHRVGEGRL 326 I G+ GM TF Q G + Sbjct: 322 TDAIADGKNTYGMQTFDQHLLELYKAGTI 350 >UniRef50_Q1CXQ0 Twitching motility protein PilT n=6 Tax=Deltaproteobacteria RepID=Q1CXQ0_MYXXD Length = 369 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 131/317 (41%), Positives = 194/317 (61%), Gaps = 4/317 (1%) Query: 11 VKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLENGQLD 67 ++ SDLHL +P RIRG + P +++ LL E +Q+ ++E+ LD Sbjct: 14 LEQKGSDLHLGIGYPPMGRIRGELVPLREQPLTAAEMQALLFEICSPEQQRQIVEDLDLD 73 Query: 68 FAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTG 127 FA S R R + F + G++ R +PS LE L P V+ +L + +GL+LVTG Sbjct: 74 FAYSYGTKARFRANYFNKMTGLAAVFRTIPSKVLSLEDLKTPEVVRKLSERRSGLVLVTG 133 Query: 128 ATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLR 187 TGSGKSTTLAAM+ ++N+ AH+LT+EDPVE+++ S R + RE+G H +FA+ +R Sbjct: 134 PTGSGKSTTLAAMINHINKTRPAHVLTIEDPVEFVHESMRAQVTHREVGPHASSFATAIR 193 Query: 188 AALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKD 247 +A REDP+VIL+GELR +ET++LAL A G LV AT+HT A ++R++++FPA E+ Sbjct: 194 SAGREDPNVILIGELRTNETMKLALQLASFGVLVFATVHTNSAPATIDRIINAFPADEQQ 253 Query: 248 PVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 VR LA SL +++Q+L GRVA E+L+ PA+ ++IREGK Q+ +Q GQ Sbjct: 254 QVRGMLAESLAGIVAQQLIKTADGKGRVAALEILVGGPAIASMIREGKVFQIASKMQAGQ 313 Query: 307 QVGMITFQQSYQHRVGE 323 GM T + V + Sbjct: 314 GQGMQTLDMHLERLVKD 330 >UniRef50_A1K8L4 Twitching motility protein n=180 Tax=cellular organisms RepID=A1K8L4_AZOSB Length = 435 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 112/328 (34%), Positives = 188/328 (57%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRAI 59 M +++A SDL + +P + G M+ L ++ QR Sbjct: 13 MHKLLAAMSNAGGSDLFISHDFPPSMKSHGSMQPMTNQKLTGELTRSLAYSLMNAAQREE 72 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + +FA+S+ R R + F Q+ + + +R + + P E+L P VL E++ ++ Sbjct: 73 FEREMECNFAISVPGLSRFRVNVFVQQTYVGMVIRTIAAEIPNFEKLSLPEVLKEVIMNK 132 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LV G TGSGKSTTLAAM+ Y N H+ HI+T+EDPVEY++ S++ LI RE+G+ Sbjct: 133 RGLVLVVGGTGSGKSTTLAAMIDYRNSHSAGHIITIEDPVEYVHKSKKSLITHREVGVDT 192 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++ L+ LR+ PDVIL+GE+RD+ET+ A+ AETGHL L TLH A Q ++R+++ Sbjct: 193 HSWHHALKNTLRQAPDVILIGEIRDAETMEHAIAFAETGHLCLGTLHANNANQTIDRIIN 252 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 FP + ++ + L+ +LR+++SQ+L + GR A E+L+NT + I +G+ + + Sbjct: 253 FFPEERRNQLLMDLSSNLRSIISQRLVKTEDGKGRRAAIEILLNTSTIAERIFKGQYNDI 312 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++ +++GM TF + EG + Sbjct: 313 KAIMEKSRELGMRTFDWALFELYNEGHI 340 >UniRef50_Q0AZI8 Twitching motility protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZI8_SYNWW Length = 350 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 144/332 (43%), Positives = 212/332 (63%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD----TPDVEELLREWLDDDQ 56 + +EEI+ +V+ SD+HL + P +R+ G + + P D +V+ L RE + Sbjct: 4 IKLEEILKKAVEMGASDVHLGYSQPPLYRVNGHLVSLPEDLLLGKEEVQSLAREIIPHKG 63 Query: 57 R-AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 + G++DFA S+ R R + F QR +LA+R++P P+ ++LG P ++ EL Sbjct: 64 IMEAFQKQGEVDFAYSIPGIARFRVNLFKQRSSWALAIRIIPLKIPEWDELGLPPIVREL 123 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 E GL+L++G++GSGKSTTLAAM+ LNQ HILTLEDP+EYL+++ C++ QREI Sbjct: 124 AMQEKGLVLISGSSGSGKSTTLAAMIDLLNQSRKFHILTLEDPIEYLHSNHNCIVNQREI 183 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +F LRAALR+DPDVI+LGE+RD ETI +TAAETGHLVLA+LH+ A Q +E Sbjct: 184 GADSKSFPQALRAALRQDPDVIMLGEMRDLETISTTITAAETGHLVLASLHSGTAIQTLE 243 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++D FP ++ +R QLA L+ V++Q+L GR+ E++I TPAV NLIRE K Sbjct: 244 RIIDIFPPHQQTQLRLQLANCLQGVINQQLLCRADGKGRILAVEVMIATPAVRNLIRENK 303 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ +QTG GM+T +++ Q + + Sbjct: 304 IHQIYSSMQTGSSFGMVTMEKAMQELWHQRLI 335 >UniRef50_A6DTL1 Twitching motility protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTL1_9BACT Length = 361 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 119/330 (36%), Positives = 186/330 (56%), Gaps = 5/330 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM----EAAPFDTPDVEELLREWLDDDQR 57 + I+ V+ SD H+ P R+ G + + D + + E Sbjct: 5 KLNSILVTGVQEGASDWHIREGSPVALRVHGGLYEISDGFVPDYDFLSSAIVEIAGQKVL 64 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + LE G DFA R R + QR +S+ R + S P LE LG P ++ ++ + Sbjct: 65 DLYLETGDADFAFDEDNAGRFRANIHRQRGLLSMTFRHVKSDVPPLEALGLPEIILKIAE 124 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 E G+ILVTG TGSGKSTT+A M+ ++N + + HI+T+EDP+EY + + + +QRE+G+ Sbjct: 125 YERGIILVTGTTGSGKSTTMACMLEHMNTNMNRHIITVEDPIEYNFKDKNSIFEQREVGI 184 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++F + L+ ALR+DPDVI++GE+RD +I AL AA+TGH+V++TLHT A Q++ RL Sbjct: 185 DTVSFGAALKYALRQDPDVIVVGEMRDVTSIESALHAADTGHMVISTLHTANAGQSITRL 244 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 +D+FPA ++ +R LA ++ A++ Q+L G V E++INT + LI + K Sbjct: 245 LDTFPATAREALRKSLAENVAAIVCQRLVPRASGRGMVPCNEVMINTAFIKKLILDDKVD 304 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ I G + GM TF Q V G + Sbjct: 305 QISGAIAKGSEYGMFTFDQRLLQLVNAGDI 334 >UniRef50_C4Z3A4 Twitching motility protein PilT n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3A4_EUBE2 Length = 349 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 134/326 (41%), Positives = 203/326 (62%), Gaps = 4/326 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT--PDVEELLREWLDDDQRA 58 M +++++ + SDLH+ + R G ++ + E++L + L+D+ Sbjct: 1 MELKQLIRKARSVQCSDLHITAGDFVAVRRFGELKLIDIKPTIEETEKMLFDILNDEDIR 60 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAP-TVLPELLK 117 + +D A S RLR + + QR ++ ++RLL ++ P E LG P +L EL Sbjct: 61 RVKNGEDIDVAASDESGGRLRINIYHQRRNLAASIRLLDANIPSFEDLGLPGKLLAELAS 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 +GL+LVTG TGSGKSTTLAAM+ Y+N + HI+T+EDP+EY+Y ++ +I QR++G Sbjct: 121 KRSGLVLVTGPTGSGKSTTLAAMIDYINNNMARHIITVEDPIEYVYGFKQSMIHQRQVGR 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 FAS LR+ALREDPDVIL+GE+RD ETI A+TAAETGHLV++TLHT+ AAQ VER+ Sbjct: 181 DVPNFASALRSALREDPDVILVGEMRDYETINAAITAAETGHLVMSTLHTKSAAQTVERI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-DKQEGRVALFELLINTPAVGNLIREGKTH 296 + + P + + + QL+ L V++Q L ++EGR+A E+++N AV NLI+E KT+ Sbjct: 241 ISACPIEAQPALTIQLSSILTGVITQTLVPFARKEGRIAATEVMLNNTAVANLIKEKKTN 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVG 322 Q+ V+Q+ GM T S + V Sbjct: 301 QIQTVLQSNLSSGMHTLNYSLANLVK 326 >UniRef50_B4CW85 Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW85_9BACT Length = 365 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 127/327 (38%), Positives = 203/327 (62%), Gaps = 3/327 (0%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE---ELLREWLDDDQRAI 59 I+ +V+ SD+HL P +RI G + P E +L + + D R Sbjct: 4 FSRILQGAVQAGASDVHLKVESPVIFRITGDLVPVEAPLPTAEWFTGVLAKIVPDYLRVR 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L ++ ++DFA SL R R + + QR G +ALR++ + E+L P V+P++ ++ Sbjct: 64 LEQDHEVDFAYSLPGVGRFRINVYQQRSGYVMALRVVKAKVRLFEELHLPPVIPKIAEAT 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +G++L+TGATGSGKSTTLAAM+ ++N A HI+TLEDP+E+++ ++ +I+QRE+G+ Sbjct: 124 HGIVLITGATGSGKSTTLAAMIEHINITAKKHIITLEDPIEFIFEDKQSVIEQREVGIDT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 TF +GL+ LR+DPDVI++GE+RDS ++ A++AA GHLV+ATLHT AA++++R+++ Sbjct: 184 GTFTTGLKNVLRQDPDVIVIGEMRDSSSVTAAISAANIGHLVVATLHTVDAAKSIQRILE 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 FP +++P R QLA +L +V+ Q+L Q V E+L+NT AV LI G ++ Sbjct: 244 FFPGPDREPTRQQLATTLHSVVCQRLVRTPQNVIVPAVEVLLNTAAVAKLIHGGNLDKII 303 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 I+ G GM TF Q+ + G + Sbjct: 304 GAIELGTGDGMQTFDQALYNMAKAGII 330 >UniRef50_Q028H4 Twitching motility protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028H4_SOLUE Length = 383 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 130/329 (39%), Positives = 190/329 (57%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQRA 58 ++++++ + SD+ L + P R+ G + D DV L+ L+ Q Sbjct: 35 SLDQLLHAAAGRGASDVLLIAGAPPMLRVTGNLTAGGGTVLDAEDVRSLVLPLLEHAQLE 94 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L + +D + R R + QR ++ ++RLLPS P +E L P L +L Sbjct: 95 ELQKRKSVDLSFVRENIGRFRVNIHHQRGTLAASIRLLPSRIPSIESLHLPGSLAKLADR 154 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TG GKS+TLAA++ +N AH++T+EDPVEY +A++ +I+Q E+G Sbjct: 155 RQGLVLVTGPTGCGKSSTLAALIDIVNTRRAAHVVTIEDPVEYQHANRSAIIEQIEVGRD 214 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 FA LR+ +R+ PDVIL+GE+RD+ETI ALTAAETGHLV +TLHT A QA R++ Sbjct: 215 TPDFAVTLRSIMRQTPDVILVGEMRDAETIATALTAAETGHLVFSTLHTNDAIQATSRIL 274 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 DSFPA + +R QL+ +L AV++Q+L R E++I T AV LIR+G HQ Sbjct: 275 DSFPAGNQPQIRQQLSLALAAVIAQQLVPGLDGVSRWPATEIMIATDAVRALIRKGDDHQ 334 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 L I G+ GM+T +QS V R+ Sbjct: 335 LRSQISVGRAEGMMTMEQSLTELVKSNRI 363 >UniRef50_Q47FA9 Pilus retraction protein PilT n=7 Tax=Betaproteobacteria RepID=Q47FA9_DECAR Length = 395 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 183/329 (55%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQR 57 M ++++ L + SD+ + + P +I+G + +E++ E + DQ Sbjct: 1 MILDKLFQLMAEKQASDIFISAGAPIHIKIQGNTIPVNQQVMLPDMIEKIAYELMSPDQI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ + + R + F QR S+ +R + + P +++LG P +L EL+ Sbjct: 61 KTFEATMEMNLSFGVPNVGNFRVNIFRQRGSTSIVIRFILGNIPAMDELGLPNILGELIM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLIL+ GATGSGKSTTLA+M+ + N + HILT+EDP+E+L+ ++ ++ QREIG+ Sbjct: 121 EKRGLILIVGATGSGKSTTLASMLDHRNANRSGHILTVEDPIEFLFKHKKSIVNQREIGM 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 M + + L+ A+R+ PD IL+GE+RD ET++ A+ A+TGHL LATLH + A+ R+ Sbjct: 181 DTMDWQAALKNAMRQAPDCILIGEIRDKETMQAAIAYAQTGHLCLATLHANNSYHALNRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 + FP + + + L+ +LRA++SQ+L R+ E+++NT + LI G+ Sbjct: 241 ISFFPLENRPALFLDLSVALRAIISQRLVKKPDGKRIPTCEIMLNTRHISELIERGEVQG 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++ G TF+Q + + Sbjct: 301 IKDAMEQTLAPGSQTFEQDLFNLYSSSTI 329 >UniRef50_C6RE58 Twitching mobility protein n=2 Tax=Campylobacter RepID=C6RE58_9PROT Length = 750 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 117/329 (35%), Positives = 186/329 (56%), Gaps = 6/329 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRAI 59 ++ + ++ SDLH+ S+ R R G + D + L +E L + Sbjct: 368 LDGYLTKLIELGGSDLHVKSSKVVRGRFNGEIFTMGDKILDYDNSILLAKEILGANYYN- 426 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS- 118 L++ +DF L ++ R R + F Q G+S R +P+ P + +L P V+ +L Sbjct: 427 LMKRKSVDFTYKLNDDYRFRSNVFLQMDGVSFVFRTIPTKIPTMSELLLPPVIEKLCNKV 486 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 G++LVTG TGSGK+TTLA+M+ +LN + HI+T+EDP+E++Y + +I QR IG Sbjct: 487 NRGIVLVTGPTGSGKTTTLASMINHLNHTKNYHIVTIEDPIEFIYNDDKSVINQRGIGQD 546 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA LRA+LREDPDVI +GE+RD ET+R A+ AAETGHLVLATLHT A + + R++ Sbjct: 547 VDSFADALRASLREDPDVIFVGEMRDLETVRTAINAAETGHLVLATLHTLDAKETIGRVI 606 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + FP +E++ +R A A++SQ+L V R E+++ + ++I E + ++ Sbjct: 607 NMFPKEEQNRIRMTFASVAEAIISQRLVVTTTGKRRVACEIMVKNIRIRDMILEDRDSEI 666 Query: 299 PHVIQTGQQ-VGMITFQQSYQHRVGEGRL 326 I+ + GM TF+Q G + Sbjct: 667 YDAIEQSKNTYGMQTFEQHLLDMYTSGII 695 >UniRef50_D2DXQ5 Twitching motility protein n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXQ5_9BACT Length = 371 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 117/328 (35%), Positives = 187/328 (57%), Gaps = 4/328 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRA 58 I+ +V+ SD+HL P RI G + TP + +LR + Sbjct: 10 TFRAILRAAVQSEASDIHLKPGSPPVVRIDGELVPVEAPTPTDAWLRVVLRSIIPQHLTT 69 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + + DFA + ++ R R + F QR ++A+RL+ + L P + +L Sbjct: 70 QFEQAHEADFAFTY-QDLRFRVNIFQQRGHPTVAMRLVKQLMRNFDDLNLPPQIADLASK 128 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 + G++++ GATGSGKSTTLAAMV ++N HI+T+EDP+E+L+ + +I+QREIG+ Sbjct: 129 QRGIVIIGGATGSGKSTTLAAMVEHVNTSVRKHIVTIEDPIEFLFTDKESIIEQREIGID 188 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 T++SGLR LR+DPDVI++GE+RD+E+ A++AA G LV TLHT Q+V+R++ Sbjct: 189 TATYSSGLRHVLRQDPDVIVIGEMRDAESAHAAMSAANIGRLVFTTLHTADTIQSVQRVL 248 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + FP+ E+D R A +L V+ Q+L +Q G + E+L+N+P++ +I E ++ Sbjct: 249 EFFPSSERDFARRLFAETLTGVVCQRLVRSEQSGTIPAAEVLLNSPSIARMIAEEHLDKI 308 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ G GM TF Q V EGR+ Sbjct: 309 RGALELGGPDGMQTFDQHLNELVREGRI 336 >UniRef50_A0RMV4 Twitching motility protein PilT n=6 Tax=Epsilonproteobacteria RepID=A0RMV4_CAMFF Length = 398 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 121/333 (36%), Positives = 188/333 (56%), Gaps = 9/333 (2%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQR 57 + + + + SDLH+ + R R++G + + + L +E L + Sbjct: 17 ELNTYLLELINSSGSDLHVKAEGIIRKRVKGEIVPISNRRVLSSKEAITLAKELLR-GRF 75 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L+E +DF ++ R R + F Q G+S R +P+ P ++LG P + + K Sbjct: 76 NELVEKKSVDFTYKFNDDYRFRVNTFFQMDGVSFVFRTIPTKLPTFDELGLPNAVEHMCK 135 Query: 118 SEN-GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 G+ILVTG TGSGK+TTLA+M+ Y+N++ +HI+T+EDP+E++Y + C+I QR IG Sbjct: 136 EIYRGIILVTGPTGSGKTTTLASMINYINKNRKSHIITIEDPIEFVYKDENCIINQRSIG 195 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 FA LR ALREDPD+IL+GE+RD ETI +A+ AAETGHLVL+TLHT A + R Sbjct: 196 QDTTNFADALRGALREDPDIILVGEMRDLETIEIAMHAAETGHLVLSTLHTVDAKDTIGR 255 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 ++ FP E++ ++ LA L+ ++SQ+L GRVA E+++ TP + NLI E + Sbjct: 256 IISMFPGNEQNRIKLSLASVLKGIISQRLCKRADGSGRVAALEIMLATPRIKNLILENRA 315 Query: 296 HQ-LPHVI-QTGQQVGMITFQQSYQHRVGEGRL 326 + I ++ GM TF +G + Sbjct: 316 SDMIYDAIAESSANSGMQTFDTHLLKLFIDGII 348 >UniRef50_A6W7B3 Twitching motility protein n=6 Tax=Bacteria RepID=A6W7B3_KINRD Length = 396 Score = 364 bits (934), Expect = 3e-99, Method: Composition-based stats. Identities = 133/324 (41%), Positives = 187/324 (57%), Gaps = 6/324 (1%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLEN 63 + V SDLH + P R RI GR+ +A E +L + L D Sbjct: 45 LRALVDLRGSDLHCKAGSPPRIRIDGRLRALQAPALTADVTERMLEQILRPDLVEEFART 104 Query: 64 GQLDFAVSLAEN-QRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 + DFA SL R R +AF QR + L LR + + L LG P V+ +L GL Sbjct: 105 HEADFAYSLPHGAGRFRVNAFRQRGSVGLVLRRVAAQAVPLAGLGVPPVIEQLALEHRGL 164 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LVTG TGSGK+TTLA M+ ++N ++HI+T+EDP+E L+ R +I QRE+ L F Sbjct: 165 LLVTGPTGSGKTTTLAGMIDHINTVRESHIVTIEDPIEVLHTDNRSMISQREVRLDTADF 224 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 + LRAA+R+DPDVIL+GE+RD ET++ AL+AAETGH V++TLHT AA+ + R++D FP Sbjct: 225 TTALRAAMRQDPDVILVGEMRDQETVKAALSAAETGHFVMSTLHTIDAAETIARIIDFFP 284 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE-GKTHQLPH 300 E+ VR LAGSLR ++ Q+L GR + E+ +NT + + I + KT Q+ Sbjct: 285 PHEQKQVRLALAGSLRGIVCQRLVPRADGAGRCVVMEVCVNTGRIADAISDPDKTSQITD 344 Query: 301 VIQTGQQVGMITFQQSYQHRVGEG 324 +I+ GQ M TF Q V +G Sbjct: 345 LIREGQYYRMQTFDQHLVALVRDG 368 >UniRef50_B1ZN20 Twitching motility protein n=3 Tax=Verrucomicrobia RepID=B1ZN20_OPITP Length = 367 Score = 364 bits (934), Expect = 3e-99, Method: Composition-based stats. Identities = 122/331 (36%), Positives = 198/331 (59%), Gaps = 7/331 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 + +++ L+V VSD+ + + P R+ GR++ P +P+ + + E + + R Sbjct: 11 INDLLKLAVDSGVSDVIIKANKPGYVRLAGRLKPVEMDPITSPEAQAFVDEHVPEVFRQK 70 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGA---PTVLPELL 116 +GQ+DFA ++ R R +AF QR +S+ +R + S P QLG L L+ Sbjct: 71 WEASGQIDFAYAVESIGRFRVNAFHQRGLVSIVMRHIKSTVPTFAQLGLDFASEALVRLV 130 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 ++++G++LV GATGSGKS+T+AAM+ ++NQ+ D HI+T+EDP+EY + ++ L QQREIG Sbjct: 131 QAKDGILLVCGATGSGKSSTMAAMLNWVNQNMDKHIVTIEDPIEYTFQDEKSLFQQREIG 190 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 L +F ++A LR++PDVIL+GE+RD ET A++AAETGHLV +T+H AQ++ R Sbjct: 191 LDVSSFDEAIKAVLRQNPDVILIGEMRDRETFETAISAAETGHLVFSTMHAATVAQSLTR 250 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKT 295 L + FP +E+ R +AGSLR + QKL + GRV E+L V NLI EG+ Sbjct: 251 LFEFFPPEEQIQARRAIAGSLRGFICQKLIPALEGGGRVVTNEILTADAVVKNLILEGQF 310 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ +++ +F + + G++ Sbjct: 311 EKIQGILEGSGDSNSYSFNKDLYRLIKAGKI 341 >UniRef50_B9YDY2 Putative uncharacterized protein n=6 Tax=Bacteria RepID=B9YDY2_9FIRM Length = 357 Score = 363 bits (932), Expect = 5e-99, Method: Composition-based stats. Identities = 122/332 (36%), Positives = 188/332 (56%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQR 57 M+ I+ +V SD+ + + P +I G M + E L++E Q Sbjct: 1 MDCPTILQQAVDRRASDIFIVAGTPLTIKINGEMVQLDDQRLTPAMTEALIQEIFKLSQN 60 Query: 58 A---ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 L + G+ DF+ SL++ R R + + QR ++ LR++ P +L + Sbjct: 61 RTMDRLHQTGEDDFSFSLSQMGRFRVNVYRQRGSLAAVLRVVRFVLPDANELHIGPEILS 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + + GL+L+TGA GSGKSTTLA ++ +N HI+T+EDP+E L+ Q+ ++ QRE Sbjct: 121 FSELKKGLVLITGAAGSGKSTTLACLIDAINHSRSGHIITIEDPIEVLHRHQKSIVSQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 IG + L AALRE PDVIL+GE+RD ET++ L+AAETGHLV ++LHT GAA + Sbjct: 181 IGQDTPDYIHALTAALREAPDVILVGEMRDLETMQTVLSAAETGHLVFSSLHTTGAANTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 R++D FPA+++ +R QL+ L+A++SQ+L G + FE++ AV IRE K Sbjct: 241 NRIIDVFPAEKQQQIRVQLSMVLQAIVSQQLIPAVGGGLIPAFEIMKVNNAVQTQIRENK 300 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ + IQ + GMIT S + + GR+ Sbjct: 301 IHQIDNTIQANAREGMITMDASLLNLLKAGRI 332 >UniRef50_C7QZF3 Twitching motility protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZF3_JONDD Length = 432 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 131/324 (40%), Positives = 184/324 (56%), Gaps = 5/324 (1%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLE 62 ++ V SDLH+ + R R+ GR+ + D +L E L + L Sbjct: 81 LLHALVSTGGSDLHIKAGSVPRVRVDGRLRRLQVPDLTDGDTARMLEEVLPEQLHQEFLT 140 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 N + DFA L R R +A+ R + + R + H L +LG P V+ EL GL Sbjct: 141 NHETDFAYYLQGVGRFRVNAYRARGMVGIVFRRVAEHAMSLHELGLPEVVGELALEPRGL 200 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LVTG TGSGKSTTLA+MV +N + +I+T+EDP+E L++ ++ ++ QRE+ F Sbjct: 201 VLVTGPTGSGKSTTLASMVDLINTLREVNIVTIEDPIEVLHSDKKAIVSQREVRFDTADF 260 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 S LRAA+R+DPDVIL+GE+RD+ET+R AL A ETGHLVL+TLHT A + V R+VD FP Sbjct: 261 NSALRAAMRQDPDVILVGEMRDAETVRAALQAGETGHLVLSTLHTIDAEETVNRIVDFFP 320 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGN-LIREGKTHQLPH 300 + E+ VR LA SLR ++SQ+L EGR + E++INT +I T L Sbjct: 321 SHEQMQVRMALAQSLRGIVSQRLVRRADNEGRHVVAEVMINTGRTAEAIIAPSTTASLTD 380 Query: 301 VIQTGQQVGMITFQQSYQHRVGEG 324 +I G+ M TF Q V +G Sbjct: 381 LIADGEYYNMQTFDQHLFGLVRDG 404 >UniRef50_Q1QT12 Twitching motility protein n=19 Tax=Gammaproteobacteria RepID=Q1QT12_CHRSD Length = 385 Score = 362 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 118/328 (35%), Positives = 188/328 (57%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 + +++ + + SDL + + P +I G + V EL+ L R Sbjct: 7 LTQLLDIMLDKQASDLLVSTGAPPSLKIDGALVTLGDKAMSVGQVRELVSAALPQGVRER 66 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + +FA+S+ R R SAF QR +++ +R + P LE L P+ L EL+ + Sbjct: 67 FEAEREANFALSVPGKGRFRVSAFYQRSQMAMVVRRIAYDIPDLESLALPSALGELVNRQ 126 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+ + G TGSGKSTTLA+M+ + NQ H++++EDP+EY++ R +I QRE+G+ Sbjct: 127 RGLVFIVGGTGSGKSTTLASMIQHRNQTTGGHVISIEDPIEYIHPHGRAIINQREVGIDT 186 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F L+ ALR+ PDVIL+GE+R E + ALT AETGHL LATLH A QA+ER+ Sbjct: 187 ESFEVALKNALRQAPDVILIGEVRSREVMEHALTFAETGHLCLATLHANNANQALERIQH 246 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 FP++ + V L+ +L+A+++Q+L + GR A E+++ +P + +LIR+G H + Sbjct: 247 FFPSERHEQVWMDLSLNLQAIVAQRLLPREDGEGRCAAVEVMLRSPLISDLIRKGAIHDI 306 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 V+Q + GM TF Q+ +GR+ Sbjct: 307 KEVMQRSRDQGMQTFDQALYALYRQGRI 334 >UniRef50_A1TQ20 Twitching motility protein n=3 Tax=Comamonadaceae RepID=A1TQ20_ACIAC Length = 387 Score = 362 bits (931), Expect = 8e-99, Method: Composition-based stats. Identities = 119/328 (36%), Positives = 183/328 (55%), Gaps = 3/328 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQRA 58 ME I+ L + SD++L + P +I G + + + LL E + D+ Sbjct: 3 TMERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAPKNLLAEIVPPDRIE 62 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L E G+L+ V L R R SA QR ++ +R + H P+L L P +L EL+ Sbjct: 63 ELEETGELNMGVPLTGVGRFRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELILE 122 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 + GL+LV GATGSGKSTTLA+M+ N HILT+EDPVEY + +++ ++ QREIG Sbjct: 123 KRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVEDPVEYQFKNKKSIVNQREIGSD 182 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + + L+ ALR+ PDVIL+GE+RD ET+ A+ A++GHL LATLH + A+ R++ Sbjct: 183 TQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNRIL 242 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 +P + + + LA +L+A++SQ+L R+ E+L+NT VG +I +G + Sbjct: 243 SFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFSGV 302 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ G TF+ V EGR+ Sbjct: 303 REAMEKSMAEGSQTFEHDLARLVVEGRI 330 >UniRef50_D1Y3N0 Twitching mobility protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3N0_9BACT Length = 361 Score = 362 bits (929), Expect = 1e-98, Method: Composition-based stats. Identities = 138/327 (42%), Positives = 192/327 (58%), Gaps = 6/327 (1%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELL---REWLDDDQRAILLE 62 + + + SD+HL +R+ GR+E E LL R L + Sbjct: 9 LFDEAAERRASDVHLSCGRAPLFRVDGRLEDGGRAVVGREWLLASIRRMLSAAEWDDWEL 68 Query: 63 NGQLDFAVSLAEN---QRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 N + A +R R S F + A+RL+P+ P EQ G P VL L Sbjct: 69 NKSVSAAHEFGAPSAPRRFRLSCFRSMGQPAAAIRLIPARIPAPEQCGLPAVLKGLCAKG 128 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +GL+L TG +GSGKST LA++V +LN+ HI+TLEDP+E+++ +R L+ QR+IG C Sbjct: 129 HGLLLFTGPSGSGKSTALASLVDWLNETCRIHIVTLEDPIEFVHEGKRALLHQRQIGRDC 188 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+GLR ALR+DPDVI +GE+RD ETI A+TAAETGHLVLATLH A QAVER++D Sbjct: 189 PSFAAGLRDALRQDPDVIGIGEMRDGETISAAITAAETGHLVLATLHAPDAPQAVERIID 248 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 +FPA ++ VR Q A SL V + +L + GR E+L+ TPAV + IRE +T QL Sbjct: 249 AFPAAQQAQVRAQTALSLAGVCAMRLVPQRAGGRCLATEMLVATPAVRSAIRESRTAQLK 308 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++QT ++ GM T +QS V + R+ Sbjct: 309 TILQTSRRDGMYTMEQSLLKLVEQKRI 335 >UniRef50_B3E8J7 Twitching motility protein n=8 Tax=Desulfuromonadales RepID=B3E8J7_GEOLS Length = 357 Score = 361 bits (927), Expect = 2e-98, Method: Composition-based stats. Identities = 121/329 (36%), Positives = 193/329 (58%), Gaps = 5/329 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 + +I+ ++ + VSDLH P +R G++ + D E + + L R + Sbjct: 6 LNQILGIAFEKRVSDLHFEVDNPPFFRAHGQLIRSKLPSLTPQDTEFIAKTVLAQSNRQL 65 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + +LD A +L R R S F QR + + +R++P + +L P VL E+ ++ Sbjct: 66 PEDLRELDAAYALPNGGRFRVSIFRQRCSVGIVMRVIPPYIAAFNELNLPPVLGEICQAP 125 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 NGLILVTG TG+GKSTTLA+M+ ++NQ+ +I+T+EDP+E+L+AS + I QRE+G+ Sbjct: 126 NGLILVTGPTGNGKSTTLASMLQFINQNDSFNIITIEDPIEFLFASDKSCIIQREVGIDT 185 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F++ L+A+LR DPDVI++GE+RD ETI + AAETGHLV +TLHT+ A+ + RLV Sbjct: 186 GSFSAALKASLRMDPDVIMVGEMRDLETIDSCIKAAETGHLVFSTLHTQSASSTINRLVG 245 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQL 298 FP ++ +R +LA L A +S +L DK RV + E++ T + IREG+ ++ Sbjct: 246 HFPPDAQEVIRQRLADILVATISLRLINDKTGERVLPVVEIMRTTTTIQACIREGRFDEI 305 Query: 299 PHVIQTGQ-QVGMITFQQSYQHRVGEGRL 326 I+ G+ Q M + Q + + Sbjct: 306 EKHIENGRTQYQMQSLDQHLVQLCQQELI 334 >UniRef50_Q2LRM4 Pili retraction protein n=11 Tax=Bacteria RepID=Q2LRM4_SYNAS Length = 404 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 127/336 (37%), Positives = 195/336 (58%), Gaps = 13/336 (3%) Query: 2 NMEEIVALSVKH--NVSDLHLCSAWPARWRIRGRMEAAPFDTP-------DVEELLREWL 52 ++ I+ + NVSDL++ P + G++ A FD P E + + Sbjct: 19 ELDYILTKMLDAYDNVSDLNMTVGKPFQVESSGQLTAVDFDPPCEKLTPFQTETIALNLI 78 Query: 53 DDDQR--AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT 110 + D+R L+ G D + +L R R + F+QR S+ LR L + P L+ L P Sbjct: 79 NGDRRLTETLVAEGSCDSSYTLQGKARFRVNIFSQRGNYSIVLRKLETRIPTLQDLNLPE 138 Query: 111 VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 ++ + +NG+ILVTGATGSGKST+LAAM+ +N+ H++TLEDPVE+++ ++ Sbjct: 139 AFEKMAQEKNGIILVTGATGSGKSTSLAAMLNEINERKSVHVVTLEDPVEFVHPHKQATF 198 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 QRE+G TFA+GLRAALR+ P VIL+GE+RD ET+ +AL+AAETGHLV++TLHT A Sbjct: 199 NQREMGTDFDTFANGLRAALRQAPKVILVGEMRDRETVEIALSAAETGHLVVSTLHTVDA 258 Query: 231 AQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLI 290 Q + R++ F +E+ +R +LA ++R ++ Q+L + GRVA FE++ N V + I Sbjct: 259 GQTINRILGMFSIEEERQIRIRLADTVRWIVCQRLLPKEGGGRVAAFEVMGNNLRVKDTI 318 Query: 291 REGKTHQ--LPHVIQTGQQVGMITFQQSYQHRVGEG 324 G++ +IQ G+ GM+TF G Sbjct: 319 LNGESEGKTFYEIIQAGKAFGMVTFDDYIVELYQRG 354 >UniRef50_Q1CXQ1 Twitching motility protein n=4 Tax=Myxococcales RepID=Q1CXQ1_MYXXD Length = 574 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 129/324 (39%), Positives = 200/324 (61%), Gaps = 3/324 (0%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRM--EAAPFDTPDVEELLREWLDDDQRAILLEN 63 ++ + SD+H+ + P +R G + + D VE+LL + + R +L Sbjct: 198 LLEEGRRGLASDVHIIAERPPLFRFAGELMAQGPVLDATTVEKLLLPVVPERLRPVLERE 257 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLI 123 G DF++ E R R + QR G+ RL+ P LE LG P + + GLI Sbjct: 258 GSCDFSLETPEMGRFRVNVSRQRTGLKGTFRLIAREVPTLESLGLPADIAKATHHHQGLI 317 Query: 124 LVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFA 183 ++TG +G GK++TLAA+V +N+ H+LT+EDPVE+++ +R LI QRE+G H TFA Sbjct: 318 VITGPSGHGKTSTLAALVDLINRETSHHVLTVEDPVEFVHPRKRALISQREVGSHTKTFA 377 Query: 184 SGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPA 243 S L+ +LREDPDVI++GELRD+ET+R+AL+AAETGHL+++T++T AA+ ++RL+D FP Sbjct: 378 SALKGSLREDPDVIVVGELRDTETVRMALSAAETGHLLISTMNTPSAAKTIDRLIDLFPP 437 Query: 244 QEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVI 302 ++ VR L+ LR ++SQ+L G VA E+L + ++GNLIR+ KT Q+P + Sbjct: 438 GDQQQVRLSLSSGLRLIVSQRLMPSADGKGLVAAAEVLPGSVSLGNLIRDNKTFQIPSLQ 497 Query: 303 QTGQQVGMITFQQSYQHRVGEGRL 326 Q G+ +G+I F+ S V G++ Sbjct: 498 QRGKSLGIIRFEDSLADLVRAGKV 521 >UniRef50_C8WIR6 Twitching motility protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WIR6_EGGLE Length = 351 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 139/333 (41%), Positives = 203/333 (60%), Gaps = 9/333 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME------AAPFDTPDVEELLREWLDD 54 MN+E I+ ++ + SD+HL P ++R+ G +E AP D E+L R D Sbjct: 1 MNVEHIIDMARQVGASDVHLVCGLPVKFRLAGCLENAGVDGDAPLSHDDCEQLARRLAGD 60 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 + G+LD A ++ R+R + F Q+ +S ALRLL P LE LG P+ + + Sbjct: 61 G-FDRIQRIGELDRAETIGG-VRVRINLFRQQGHVSAALRLLSDRIPALETLGLPSAVMD 118 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + + G+++VTG TGSGKSTTLAA++ +N +I+T+EDP+EY+Y + +I QRE Sbjct: 119 FPRIQRGIVVVTGETGSGKSTTLAALIDSINHTRAENIITMEDPIEYVYTPDQSVISQRE 178 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 IG ++++ LRA LREDPD+IL+GE+RD +TI+ ALTAAETGH VLATLHT+ AA ++ Sbjct: 179 IGQDTESYSNALRAVLREDPDIILVGEMRDLDTIQTALTAAETGHFVLATLHTKSAADSI 238 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREG 293 +R+VD FP + VR QL+ +L AVLSQ+L + GR EL++ TPA+ NLIREG Sbjct: 239 DRMVDVFPEGLQRQVRMQLSTTLVAVLSQQLLPRRDGMGRALACELMMVTPAIRNLIREG 298 Query: 294 KTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 KT Q+ + T G +T + + Sbjct: 299 KTPQIAGSLATSASAGSVTMDNALIALARNRDI 331 >UniRef50_B7C7D1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7D1_9FIRM Length = 351 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 114/332 (34%), Positives = 195/332 (58%), Gaps = 7/332 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA------PFDTPDVEELLREWLDD 54 M++ EI+ ++K N SD+ + P ++ ++ A P DT ++ + L + Sbjct: 1 MDVVEILKKAIKENASDIFFVAGSPCMLKVGQQLVAITQEKMMPNDTKNIVQQLYGFAPY 60 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 +NG+ DF+ SL++ R R + + QR+ + LR++ P+ E P + Sbjct: 61 CSYENFEKNGEDDFSFSLSQVGRFRVNVYRQRNSEAAVLRVVKFELPKPEDFHIPESILS 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L G+ILV+G GSGKSTTLA ++ +N+ + HI+T+EDP+E+L++ ++ ++ QRE Sbjct: 121 LSNRRKGIILVSGPAGSGKSTTLACLIDRMNETRNCHIITIEDPIEFLHSHKKSIVSQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 + + + L++ALRE P++ILLGE+RD ET+ AL+AAETGHL+L+TLHT GA + Sbjct: 181 VYHDTKNYLTALKSALREAPEIILLGEMRDEETVSTALSAAETGHLILSTLHTVGAVNTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 +R+VD F +D VR+QL+ L AV+S++L + +FE++ PA+ + IRE K Sbjct: 241 DRIVDMFQGH-QDQVRSQLSMILEAVISEQLIPTIDGELIPVFEIMQVNPAIRSQIRENK 299 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ + + + +Q GM+ S + ++ Sbjct: 300 IHQIENTMASNRQNGMVMMDDSIFELYQQNKI 331 >UniRef50_B2KCH7 Twitching motility protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCH7_ELUMP Length = 362 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 119/327 (36%), Positives = 198/327 (60%), Gaps = 4/327 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIR---GRMEAAPFDTPDVEELLREWLDDDQRAI 59 + ++ V + S LHL + R+ ++E + +V ++ + D ++ I Sbjct: 5 LTSLLKTVVDNKASGLHLRGNSFSFVRLNRQIKQIEDSFLSNDEVRKIAYACMSDREKKI 64 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAP-TVLPELLKS 118 ENG +DF++ EN R R + + Q + +++R +P P L P VL ++ ++ Sbjct: 65 FEENGTVDFSLDAKENGRFRFNVYRQSGKVCISIRHIPLKIPTFADLNLPGDVLEKITEN 124 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKS+TLAAM+GY+N+ HILT+EDP+E+++ ++C++ Q +GL Sbjct: 125 RRGLVLVTGMTGSGKSSTLAAMLGYINRARRGHILTIEDPIEFVHTEEKCIVSQLALGLD 184 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++ + LRA++R+DPDVI++GELRDS+ +R A+ AAETGHLV T+HT A Q + RL+ Sbjct: 185 THSYMAALRASMRQDPDVIMIGELRDSDVVRAAIAAAETGHLVFTTVHTVDAVQTLNRLI 244 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 SFP +++ V+ QLA ++ ++SQ+L D + G + E++++TP + LI +GK ++ Sbjct: 245 QSFPFEQQAQVKVQLAELIKGIVSQRLLPDLKGGMIPAVEVMVDTPQIKKLITDGKIDEV 304 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGR 325 I G+ GM TF QS G+ Sbjct: 305 SRHIGMGEYYGMQTFDQSLVELYRAGK 331 >UniRef50_A6DU37 Pili retraction protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DU37_9BACT Length = 478 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 127/329 (38%), Positives = 189/329 (57%), Gaps = 7/329 (2%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWR---IRGRMEAAPFDTPDVEELLR-EWLDDDQRAIL 60 + + + ++ SD HL + R I + TPD+ + L L + Sbjct: 130 QFLQAARRNGSSDAHLSADAYPFVRHFGINYLLREQAIMTPDMAKKLNLSLLGEKDLKAF 189 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGA--PTVLPELLKS 118 E G LD+ S + +R R + G+ + R++ L +LG P VL +L Sbjct: 190 EEVGDLDYCYSFSRTERYRSNLMVHNDGVEGSYRIVSEGIKTLAELGFQEPAVLEKLTTY 249 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLIL+TG SGK+TTLAAMV +N++ HI+T+EDPVE L S+ C + QRE+ Sbjct: 250 HQGLILITGPASSGKTTTLAAMVDLINKNRKDHIITVEDPVEILIPSKDCNVSQRELHTG 309 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA+ L+AALREDPD+I+LGE+RD ETI + L+AAETGHLV+ TLHT A+ ++R++ Sbjct: 310 TKSFANALKAALREDPDIIILGEMRDLETIEMGLSAAETGHLVIGTLHTNSASSTLDRIL 369 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP ++ +R +A SLR V+ Q L +K E G + E+LI AV NLI++ KT Q Sbjct: 370 DVFPPDQQSQIRAMVAESLRGVICQYLVPNKDETGLLMAPEILIGNIAVANLIKDNKTSQ 429 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 L VI+ G++ GM+ + S+ EG++ Sbjct: 430 LTSVIEVGKKQGMVLKEDSFLRLYHEGKI 458 >UniRef50_A1VIC5 Twitching motility protein n=2 Tax=Proteobacteria RepID=A1VIC5_POLNA Length = 384 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 122/323 (37%), Positives = 189/323 (58%), Gaps = 3/323 (0%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRAILLEN 63 +AL V H SDL L + A +I+GR+ P ++ L + D Q + Sbjct: 25 LALMVAHGASDLFLSAEVAASLKIQGRIRRLPEPPLTGTHIKRLAYSVMRDSQVREFEAD 84 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLI 123 + D A+++ R R + F QR +++ +R + S P LE L P VL L + GL+ Sbjct: 85 LECDLAIAMDALGRFRVNVFRQRGEVAVVVRHINSTIPTLESLKLPPVLKTLAMLKRGLV 144 Query: 124 LVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFA 183 LV GA GSGKSTTLAAM+ Y N A HILT+EDP+E+ ++ ++C++ QRE+GL +F Sbjct: 145 LVVGAAGSGKSTTLAAMLDYRNNMASDHILTVEDPMEFEHSHKKCIVDQREVGLDTRSFD 204 Query: 184 SGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPA 243 LR A+RE PDVI++GE+RD ET++ A+ AETGHL ++TLH A QA++R+++ FP Sbjct: 205 EALRRAMREAPDVIMIGEIRDRETMQHAMAYAETGHLCVSTLHANNANQAIQRVLNFFPE 264 Query: 244 QEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 + V L+ +L+ V+ Q+L RV E+++ +P V +LI++G+T ++ V+ Sbjct: 265 TAQRQVLMDLSLNLKGVVGQRLLAGAAGKRVPAVEVMLLSPYVADLIQKGQTDEIKAVMA 324 Query: 304 TGQQVGMITFQQSYQHRVGEGRL 326 ++GM TF QS G + Sbjct: 325 KSVELGMATFDQSLYELYVRGDI 347 >UniRef50_B8GL39 Twitching motility protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL39_THISH Length = 364 Score = 357 bits (918), Expect = 2e-97, Method: Composition-based stats. Identities = 128/328 (39%), Positives = 197/328 (60%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAI 59 + + L + SDLHL P R+ G + F ++E + E L QR Sbjct: 4 INAFLKLGREQGCSDLHLAVGVPPMLRMNGDLMPIKFRDLGERELEAYVLEILTPTQRKR 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + LDF+ E R R + F + G+ R +P+ PQL++LG P+V+ EL++ Sbjct: 64 FRDGEDLDFSYVAEEVGRFRVNLFRKATGVGATFRHVPATVPQLDELGLPSVVHELIEHH 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 G++LVTG+TG+GKSTTLAA++ ++N +IL+LEDP+E+++ S++ + QRE+G H Sbjct: 124 QGMVLVTGSTGTGKSTTLAAIIDHINNRRAVNILSLEDPIEFVHHSKKAQVIQREVGTHV 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++A GLRAALREDPDVIL+GELRDSE+I +A+ AAETGHLVL TLHT A + ++R++D Sbjct: 184 QSYADGLRAALREDPDVILVGELRDSESITMAMIAAETGHLVLGTLHTTSAVKTIDRILD 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 + P + ++ + L+ +L VL+Q L GR A+ E L+ T A+ +I K HQ+ Sbjct: 244 AIPIELREQGKTFLSQNLHGVLTQNLVKKADGRGRQAVVESLVVTRAIAKMIMTDKVHQI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 P +QTG+ GM Q+ + + + Sbjct: 304 PSQMQTGRDRGMQLLDQALMEALEKKLI 331 >UniRef50_D1N9I8 Twitching motility protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9I8_9BACT Length = 551 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 127/329 (38%), Positives = 184/329 (55%), Gaps = 9/329 (2%) Query: 6 IVALSVKH-NVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAILL 61 I+ ++ SDLHL + R R+ D L + ++R Sbjct: 190 ILLTCLRALGCSDLHLSAGSQPFVRRMLGIERISDYVLTAEDARRLNLALVSAERRGQFE 249 Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTV----LPELLK 117 E ++FA+ + ++ R R + GI + RL+P H LE+LG + LL Sbjct: 250 EEMDINFALEVGQD-RFRVCLMMHKDGIEGSYRLVPDHICTLEELGFLESDVTHIKRLLD 308 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 NGL+LVTG GSGK+TTLAAMV +N HI+T+EDP+E L S+ C + QREIG Sbjct: 309 YHNGLVLVTGPIGSGKTTTLAAMVDIINDKRTDHIITVEDPIEILQWSKNCQVTQREIGR 368 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 H +++ + L+ ALREDPDVI++GE+ D ETI A+TA+ETGHLV+ TLHT AA + RL Sbjct: 369 HTVSYHAALKGALREDPDVIVIGEMHDLETIENAITASETGHLVIGTLHTSDAANTLNRL 428 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 +D FP ++ +R AGSLR ++ Q+L G +E+++NT AVG++I EGKT + Sbjct: 429 LDVFPPSQQPQIRAMTAGSLRGIICQRLVPAAAGGLTVAYEIMVNTMAVGSIINEGKTFR 488 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 L + TG + GM T Q + G + Sbjct: 489 LKSTMATGSRQGMCTLDQCLLEKYKRGLI 517 >UniRef50_C6NZC5 Twitching motility protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZC5_9PROT Length = 389 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 183/329 (55%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQR 57 M + ++ L+ SDL L P +I G + D V+ + E + + Q Sbjct: 1 MIITPLLQLAADRQASDLFLSVGAPINIKIDGVVMPVNAQILDEQTVQRIAYEMMTEQQI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + +++F+ + R + F QR +++ +R + +E+L P VL EL+ Sbjct: 61 NEFELHMEMNFSFRVPRVGNFRVNVFRQRSSVAVVIRYVRGDVLNVEELHLPLVLKELVM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+L+ GATGSGKSTTLAAM+ + N+ HILT+EDP+EY++ + ++ QRE+G Sbjct: 121 EKRGLVLMVGATGSGKSTTLAAMIQHRNETQSGHILTIEDPLEYMFRHSKSIVNQREVGT 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ + L +A+RE PDV+++GE+RD ET++ AL A+TGHL L+TLH + A+ R+ Sbjct: 181 DTTSYETALVSAMREAPDVLMVGEIRDRETLKHALIFAQTGHLCLSTLHANNSYHALNRM 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 V+ FP + + + L+ LRAV+SQ+L + Q + E+L+N+ + +LI+ + Q Sbjct: 241 VNFFPYDARPSILSDLSLCLRAVISQRLIRNAQGKLMPAVEVLLNSSLIADLIKSDQIDQ 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + I+ G TF+Q+ G + Sbjct: 301 IRDAIEQSVSPGSQTFEQALYKLFKSGHI 329 >UniRef50_B0MN56 Putative uncharacterized protein n=12 Tax=Bacteria RepID=B0MN56_9FIRM Length = 355 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 125/332 (37%), Positives = 190/332 (57%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M + EI+ +V+ SD+ + S ++ G + + E L++E R Sbjct: 1 MELMEILKGAVEKKASDIFIISGLAVTYKENGIITKQNDNMILPAEAERLIKEIYRLAGR 60 Query: 58 AI--LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT-VLPE 114 I E G DF+VS+ R R SA+ QR ++ +R++ P ++L P V+ + Sbjct: 61 DISRYEETGDDDFSVSVKGLSRFRISAYKQRGSMAAVIRVVEFDIPDYKELNIPQEVITD 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + GL+LVTG G GKSTTLA ++ +N+ ++HI+TLEDP+EYL+ +++ +I QRE Sbjct: 121 TVARTKGLVLVTGPAGGGKSTTLACIIDEINKQRNSHIITLEDPIEYLHKNKKSIISQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 I ++ LRA LR+ PDVILLGE+RD ETI ALTAAETGHLV++TLH+ GA + Sbjct: 181 INSDSKSYIVALRACLRQSPDVILLGEMRDYETISTALTAAETGHLVISTLHSVGAQNTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 +R++D FP ++ VR QL+ L +V+SQ+L + FE++ A+ N+IRE K Sbjct: 241 DRIIDIFPPSQQQQVRIQLSQLLCSVISQQLIPCEDGILRPAFEIMKCNNAIRNMIRESK 300 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 THQ+ VI + GM T H G++ Sbjct: 301 THQIDTVITASGESGMFTMDSYLMHMYRNGQI 332 >UniRef50_C5T541 Twitching motility protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T541_ACIDE Length = 392 Score = 357 bits (916), Expect = 4e-97, Method: Composition-based stats. Identities = 117/323 (36%), Positives = 185/323 (57%), Gaps = 3/323 (0%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQRAILLEN 63 +AL+V+ SDL L + P + +G + DV ++ + Q + Sbjct: 16 LALTVREGASDLFLLAGAPPTLKRQGAFVPITKVAVSAEDVRTMVYSIMRKAQIEEFEAS 75 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLI 123 + DF+ + R R + QR + + +R + + P L++LG P+VL +L + GL+ Sbjct: 76 RECDFSFQTPDQARFRVNVHLQRGNVGVVIRHVTARIPSLDELGLPSVLKQLAFLKGGLV 135 Query: 124 LVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFA 183 L GA GSGK+TTLAAM+ Y N+ HILT+EDP+EYL+A ++ L+ QRE+GL ++ Sbjct: 136 LTVGAAGSGKTTTLAAMLDYRNERTPGHILTVEDPIEYLHAHKKSLVTQREVGLDTASYD 195 Query: 184 SGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPA 243 LR A+RE PDVI++GE+RD T++ AL AE+GHL ++TLH A QAV+R+V+ FP Sbjct: 196 EALRRAMREAPDVIMIGEIRDRATMQHALHYAESGHLCVSTLHASNANQAVQRIVNFFPE 255 Query: 244 QEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 Q + + L+ +L+AV++Q+L Q V E+++ TP V LI++G+ ++ I Sbjct: 256 QAQRQLLMDLSMNLKAVVAQRLIKGVQGSMVPAMEVMLLTPFVSELIQKGEVDEIKTAIA 315 Query: 304 TGQQVGMITFQQSYQHRVGEGRL 326 + GM TF QS G + Sbjct: 316 RSGEQGMCTFDQSLFELYEHGAI 338 >UniRef50_A3ZSU4 Twitching motility protein PilT n=2 Tax=Planctomycetaceae RepID=A3ZSU4_9PLAN Length = 381 Score = 356 bits (914), Expect = 6e-97, Method: Composition-based stats. Identities = 124/334 (37%), Positives = 186/334 (55%), Gaps = 8/334 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 + +++I VK SDLH+ P RI G + P + ++ LL LD+ + Sbjct: 18 LEVDKIFRACVKLEGSDLHMKVGRPPIVRISGTLRELNREPVEAEEMVRLLLPLLDERNK 77 Query: 58 AILLENGQLDFAVSL---AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 IL ENG DFA + R R + Q + L R + + PQ + L P ++ Sbjct: 78 RILEENGGADFAHQIQVDGVRWRFRVNMLTQLGNLGLVARRINNWIPQFDGLNLPPIMES 137 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L K + G++L+ G TGSGKSTT+A+M+ ++N + HILTLEDP+E++Y+ +CLI QRE Sbjct: 138 LCKFDQGMVLLAGVTGSGKSTTIASMLNWINANYSKHILTLEDPIEFVYSEDKCLINQRE 197 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 IG F + A+REDPD+IL+GE+RD ET A+ AAETGHLV T+H A + Sbjct: 198 IGQDVKNFEIAMGHAVREDPDIILIGEMRDQETFLTAIHAAETGHLVFGTIHASSAPSTI 257 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--DKQEGRVALFELLINTPAVGNLIRE 292 R++D FP + +R+ +A ++R +++QKL GRV E++ TP V LI E Sbjct: 258 GRILDLFPEEMHGSIRSAMAFNMRGIVAQKLLKSIKPGVGRVPTVEIMTMTPMVQKLILE 317 Query: 293 GKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 GK +LP I+ G+ GM F S + + + + Sbjct: 318 GKDSKLPDAIRIGKDDGMQDFTMSLKKLIEDDLI 351 >UniRef50_C7RKW6 Twitching motility protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKW6_9PROT Length = 368 Score = 355 bits (913), Expect = 9e-97, Method: Composition-based stats. Identities = 140/317 (44%), Positives = 189/317 (59%), Gaps = 4/317 (1%) Query: 11 VKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQRAILLENGQLD 67 V SDLHL P WR+ G M A + + ELL L Q+ L + G +D Sbjct: 23 VDKQASDLHLAGGRPPYWRLHGAVAPMSATVWPHAAMHELLTALLAAGQQRDLADKGSVD 82 Query: 68 FAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTG 127 + +R R + F ++LA R LP+ C +L P L +L +GL+LVTG Sbjct: 83 LGYTSRAGERFRINVFRSLGELALAARHLPARCASFTELRLPESLRDLAHLASGLVLVTG 142 Query: 128 ATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLR 187 TGSGKSTTLA ++ +N AHILT+EDPVE+++ + +I RE+ FA +R Sbjct: 143 ITGSGKSTTLATLINEINSTMPAHILTIEDPVEFVHRPAQAIITHRELHTDVPDFAGAVR 202 Query: 188 AALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKD 247 AALREDPDVIL+GELRD++T+R AL AAETGHLVL+TLHT A AVER V +FP QE+ Sbjct: 203 AALREDPDVILVGELRDNDTMRAALMAAETGHLVLSTLHTADATGAVERFVGAFPGQEQS 262 Query: 248 PVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 VR++L+ L+AV++Q+L GRVA E+L TPAV NLI G+T Q+ I++G+ Sbjct: 263 VVRHRLSLVLKAVIAQQLLPAVGRAGRVAAVEVLQVTPAVANLIASGRTAQIYSAIESGR 322 Query: 307 QVGMITFQQSYQHRVGE 323 GM TF Q+ + Sbjct: 323 DSGMQTFDQALAGLARD 339 >UniRef50_C1XRI8 Pilus retraction protein PilT n=2 Tax=Meiothermus RepID=C1XRI8_9DEIN Length = 374 Score = 355 bits (911), Expect = 1e-96, Method: Composition-based stats. Identities = 118/328 (35%), Positives = 186/328 (56%), Gaps = 5/328 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M E++A V SD+H+ + P R+ GR++ L+ D+ Q+ Sbjct: 1 MTFPELLAQLVSQGASDIHIHAGMPLMVRLHGRLQPIGQSKLTPQWTATLVDLMCDERQK 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + + Q+D A SL R R + F QR +S +R++ S +L+ + P E + Sbjct: 61 VLFKQRYQVDIAYSLPGVARFRVNLFRQRGSVSAVMRVINSDEEKLKIVSLPQETIEYFR 120 Query: 118 -SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 E GL+L+TG TGSGKSTTLA ++ +N+ D I+T+EDP+EYL+ ++ +I QRE+G Sbjct: 121 DQEKGLVLITGPTGSGKSTTLARILDEINRTHDKMIITIEDPIEYLHKPKKSVIVQRELG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 ++F L AA+R+DPDVI++GE+R+ ET AL AA+TGHLV +T+HT + V R Sbjct: 181 SDTLSFDEALIAAMRQDPDVIMIGEIRNYETAAAALEAAQTGHLVFSTMHTLDTVRTVNR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIRE-GKT 295 ++D FP E++ R A SL ++SQ+L K GRVA+ E+L T + ++I++ KT Sbjct: 241 MMDLFPPHEREVARILFAESLVGIVSQRLLKSKGGGRVAVTEILKGTLRIRDMIKDPAKT 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGE 323 + L ++ + GM TF G+ Sbjct: 301 YGLYDALRESRLDGMQTFDDHLAELYGQ 328 >UniRef50_UPI00016C3547 twitching motility protein PilT n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3547 Length = 359 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 131/330 (39%), Positives = 186/330 (56%), Gaps = 10/330 (3%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAILLEN 63 + +V+ SDLH+ + P R+ G + AP D E LL +D L + Sbjct: 13 LEWAVQAGASDLHVVAGHPPVIRLHGDLIELPEAPLTAADTEPLLLSSCPEDVAQRLQNS 72 Query: 64 GQLDFAVSL---AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLP-ELLKSE 119 D++ ++ R R + F RL+P P L G P L L+ Sbjct: 73 KNADYSFECELGGKSTRFRATLFLAGGDTGGCFRLIPDAIPDLTWAGFPADLAARLVALR 132 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ-RCLIQQREIGLH 178 +GL++VTGATGSGKSTTLA +V +N+ I+T+E+PVEY + + +I QRE+G Sbjct: 133 DGLVIVTGATGSGKSTTLAMLVNQINKAGGYRIITVEEPVEYRFPREPNSVITQREVGGD 192 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++FA GL+ LR+DPDVIL+GE+RD ET ++AL+AAETGHLV +TLHTR A A+ RL Sbjct: 193 VLSFADGLKYGLRQDPDVILVGEVRDRETAQMALSAAETGHLVFSTLHTRDAKGAITRLP 252 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--KQEGRVALFELLINTPAVGNLIREGKTH 296 D FP VR+QLA SLRA++SQ+L K E R E+L NT V + IR+ K Sbjct: 253 DLFPPDAHSGVRSQLAMSLRAIVSQRLLPSVQKSEKRHLALEVLWNTHPVASAIRQNKVE 312 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + + IQTG++ GM T +S + G++ Sbjct: 313 SIDNCIQTGREDGMWTCDESVRLLFRMGKI 342 >UniRef50_C5V2P0 Twitching motility protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V2P0_9PROT Length = 386 Score = 352 bits (905), Expect = 9e-96, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 176/329 (53%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQR 57 M + ++ L+ + SDL P +I G + + ++ + E + Q Sbjct: 1 MIVTPLLKLAAEKLASDLFFSVGAPVNVKIDGNAVPVNSQVLSADIIKRIAYEMMSSRQI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 N +++F+ R + F QR I++ +R + ++++L P VL L+ Sbjct: 61 IEFEANMEMNFSYREEGLGNFRVNIFRQRGDIAIVIRYIRGKISEMDKLHLPPVLKSLIM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILV GATGSGKSTTLA+M+ Y ++ HILT+EDP+EYL+ + ++ QREIG Sbjct: 121 EKRGLILVVGATGSGKSTTLASMIDYRSRTQTGHILTIEDPIEYLFKHDKSIVNQREIGT 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 + + L +RE PDV+++GE+RD ET++ AL A+TGHL L TLH + A+ R+ Sbjct: 181 DTKNYENALSCGMREAPDVLMIGEVRDRETLKHALIFAQTGHLCLTTLHANNSYHALNRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 V+ FP + V + L+ LRAV+SQ+L + +V E+L+NT + +LI+ + + Sbjct: 241 VNFFPYDSRQSVLSDLSMCLRAVISQRLVRNVHGKQVPAVEVLLNTTLIADLIKNDEIEK 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + I G TF+Q+ G + Sbjct: 301 IHEAIDKSVSAGSQTFEQALYRLFKTGVI 329 >UniRef50_D0L1U2 Twitching motility protein n=6 Tax=Gammaproteobacteria RepID=D0L1U2_HALNC Length = 387 Score = 351 bits (901), Expect = 2e-95, Method: Composition-based stats. Identities = 113/327 (34%), Positives = 185/327 (56%), Gaps = 3/327 (0%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQRAI 59 ++ + L + SDL+ + +I+G + VE + L +Q Sbjct: 6 LDPFLKLLAEKEGSDLYFSTGALPAVKIQGELRFIGKERLKPGQVEGYAKSILSPEQTDA 65 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + +L+ A+S R R + F QR S+ +R + S P++ L P V+ +L++ Sbjct: 66 FYRDLELNLALSRPSLGRFRVNIFMQRGEWSMVIRFIKSEIPRIADLNLPQVIEKLVEER 125 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GLILV GATGSGKSTTLAAM+ Y + HILT+EDP+EY + + ++ QRE+G+ Sbjct: 126 RGLILVVGATGSGKSTTLAAMIDYRAEARPGHILTIEDPMEYAFRHRNSVVNQREVGVDT 185 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++A+ L+ ALRE PDVI++GE+RD T+ AL A+TGHL ++TLH A QA++R++ Sbjct: 186 HSYAAALKEALREAPDVIMIGEVRDKATMEHALAYADTGHLCVSTLHATNAHQALDRIIR 245 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 FP + +D + L+ +LRA++SQ+L + Q RV E+++NTP + +LI+ G+ ++ Sbjct: 246 FFPPESRDQLLMDLSLNLRAIISQRLVIGSQGMRVPAVEIMVNTPFIADLIKRGEIDEMK 305 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ + G TF S G + Sbjct: 306 EAMEKNELEGSQTFDMSLHALWKAGNI 332 >UniRef50_Q31PZ1 Twitching motility protein n=5 Tax=Cyanobacteria RepID=Q31PZ1_SYNE7 Length = 370 Score = 350 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 132/329 (40%), Positives = 191/329 (58%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTP----DVEELLREWLDDDQR 57 +E++V + + SD+HL P +R+R +M P D+ L E L Q Sbjct: 5 TIEQLVRKACQVQASDIHLRVGHPPYFRLREQMYPLPNAPAATDSDMASWLNEILTPTQL 64 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + L E +LD A+ + R R F G+++ LRL+P P L L PTVL L++ Sbjct: 65 SRLNETQELDEALFYPDLIRCRVICFQTLDGVAITLRLIPLQIPSLMDLQLPTVLSALIQ 124 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILVTG TGSGKSTTLAAM+ +NQ HI+T+EDP+EY++ RCLI QRE+G Sbjct: 125 RKQGLILVTGPTGSGKSTTLAAMISEMNQSMARHIITIEDPIEYVFEPVRCLITQREVGR 184 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 H F+S +RAALR DPDVIL+GE+RD +T++ A+ AA+TGHLVL TLH R A ++RL Sbjct: 185 HVHDFSSAVRAALRADPDVILVGEIRDQKTLKAAMHAAQTGHLVLGTLHARNAIATIDRL 244 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 + + R Q L AV++Q+L R A+ E+LINTPA+ + + G+ + Sbjct: 245 IGLDGMVQSADTRKQFLELLVAVIAQQLITTYSGSRRAVLEVLINTPAIQDYLTRGELDE 304 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++ GM T ++ + +GRL Sbjct: 305 AYRLMELDTIEGMQTLNEALITEIEQGRL 333 >UniRef50_B1Y6E6 Twitching motility protein n=14 Tax=Burkholderiales RepID=B1Y6E6_LEPCP Length = 404 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 114/326 (34%), Positives = 180/326 (55%), Gaps = 3/326 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRA 58 N+E I+ L + SD+ L + P +I G++ D +LL E L Q Sbjct: 4 NLERILRLMAEKRASDVFLSANMPVLIKIHGQIMQLTQDQLAPNQTRQLLAEMLTHTQLE 63 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L E G+L+ + L R SAF QR I+ R +P+ P +E L P LP + + Sbjct: 64 DLDETGELNVGLQLPGVGSFRLSAFKQRGTIAAVFRCMPTEVPTIESLNLPDSLPAIALA 123 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+L+ GATGSGKSTTLA+M+ N+ HILT+EDP+E+L+ + + ++ QRE+G Sbjct: 124 RRGLVLMVGATGSGKSTTLASMIQQRNRTVAGHILTIEDPIEFLFTNYKSVVNQREVGRD 183 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + GL+ A+R+ PD I +GE+RD ET+ AL+ A +GHLVL+TLH + A+ R++ Sbjct: 184 VQSLQIGLKNAMRQAPDCIFIGEIRDRETMSAALSYALSGHLVLSTLHANNSHHALNRIL 243 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + + + + + LA L+A++SQ+L + GR+ E+L+NT + LI +G + Sbjct: 244 SFYTPEARPALMSDLASGLKAIVSQRLLRSTRGGRIPACEVLLNTQLIAELIDQGNFGGV 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEG 324 ++ G TF+Q + EG Sbjct: 304 KEAMERSIAEGSQTFEQDLARLISEG 329 >UniRef50_A6GEM2 Twitching motility protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GEM2_9DELT Length = 695 Score = 349 bits (896), Expect = 8e-95, Method: Composition-based stats. Identities = 124/326 (38%), Positives = 193/326 (59%), Gaps = 6/326 (1%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRMEAA--PFDTPDVEELLREWL---DDDQRAILL 61 + + + SD+HL PAR+R G + DVE +L + D L Sbjct: 286 LTEARESGASDIHLVGDQPARFRRLGSLSPVGPAIAKRDVEPMLMPLMRQAGDTLTKQLE 345 Query: 62 ENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENG 121 + G DF++ A R+R + R G+ R++ P L +LG P L ++ + G Sbjct: 346 DIGYADFSIQFASTGRMRVNFAKGRTGLKGCFRVIIDTPPTLTELGLPKELGKVAEYHQG 405 Query: 122 LILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMT 181 L +V+G +G GK+TT+AA+V +N++ HI+T+EDP+E ++ +R +I QR++GLH + Sbjct: 406 LAIVSGPSGQGKTTTMAALVDLVNRNKPDHIITVEDPIEVVHPIRRSVISQRQVGLHTAS 465 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 F L+AALREDPDVI++GELRD ET+ +AL AAETGHLV+A++ T A+ ++RL+D F Sbjct: 466 FHRALKAALREDPDVIVIGELRDRETVEMALQAAETGHLVIASMSTPSGAKTIDRLIDMF 525 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGR-VALFELLINTPAVGNLIREGKTHQLPH 300 P ++ VR+ LAG+L+ V+SQ+L R VA EL+ + +LIRE K +QLP Sbjct: 526 PPDDQSQVRSTLAGALKIVVSQRLVPAADGTRMVAAAELITGNIPLWSLIRENKLYQLPS 585 Query: 301 VIQTGQQVGMITFQQSYQHRVGEGRL 326 ++Q G+ GMI + S + +G + Sbjct: 586 LLQRGRNYGMIRVEDSLNELLAQGVI 611 >UniRef50_A4A7Z0 Twitching motility PilT family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A7Z0_9GAMM Length = 373 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 125/330 (37%), Positives = 193/330 (58%), Gaps = 4/330 (1%) Query: 1 MNME--EIVALSVKHNVSDLHLCSAWPARWR--IRGRMEAAPFDTPDVEELLREWLDDDQ 56 M++E +AL V D++ S + V+ + R D + Sbjct: 4 MDLEIAPYLALMVNKEGEDIYFHSGAKILIKGPFGFAWLGEQLQPGQVDHIFRSIASDKK 63 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 E+G++DF++ + R RGSAF QR SL R + + P +E+LG PTVL +L+ Sbjct: 64 IMEFEEHGEVDFSLGVPNLGRFRGSAFRQRGETSLVFRYVRNDIPTVEELGLPTVLNDLV 123 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +NGL++V GATGSGKST+LAAM+ + N +A HILTLEDP+EYL+ +R ++ QREIG Sbjct: 124 MEKNGLVVVVGATGSGKSTSLAAMIDHRNTNAAGHILTLEDPIEYLHNHKRSVVAQREIG 183 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + ++++G+R+A+R P+VILLGE+RD ET+ L A TGHL L TLH A A+ER Sbjct: 184 VDTESYSTGIRSAMRSAPNVILLGEIRDHETMEFGLKFANTGHLCLTTLHANNAVSALER 243 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 ++ FP +++ ++A +LR ++SQ+L G+ A E+L+NTP V +LI + Sbjct: 244 MMTFFPPEDQANEVVRIAQNLRGIISQRLVPTIDGGKCAAMEVLVNTPRVQDLITKQDLT 303 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +L + I+ G + M TF Q+ +G + Sbjct: 304 ELRNTIEQGSKYQMRTFDQALIALYEKGTI 333 >UniRef50_UPI0001744C3C Pilus retraction protein PilT n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744C3C Length = 361 Score = 346 bits (888), Expect = 7e-94, Method: Composition-based stats. Identities = 121/329 (36%), Positives = 189/329 (57%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRA 58 ++ + + L + SDLHL + P R+ G ++ D E++ L + QR+ Sbjct: 5 DLIDYLNLVCQFGGSDLHLSAESPPMMRLNGILQPLTDEVLDAETCREIILGGLKESQRS 64 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L + +LDFA+ + R RG+ + + + R +P H P L LG + + Sbjct: 65 RLEQEWELDFAIEVENLGRFRGTVYYVTSHLEGSFRHVPEHIPDLADLGHGPNVERMCDR 124 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 E+GLIL+ G +GSGK+TTLA+M+ + + +I+++EDPVEY++ R +++QR++G Sbjct: 125 EHGLILIAGTSGSGKTTTLASMIQKVARERGGNIVSIEDPVEYVFKHHRGVVRQRQVGAD 184 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F LR+ALR D DVI++GE+RD E+IR+A+TAAETGHLV+ TLHT A+ V R++ Sbjct: 185 TQSFVHALRSALRSDADVIVIGEMRDLESIRIAITAAETGHLVIGTLHTTDASTTVARIL 244 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D+FP + +D V +QLA SL V+ Q L + GRV E++ N + IR + Q Sbjct: 245 DAFPEEIQDYVSSQLAHSLIGVVCQHLITRLDQPGRVLATEVMTNNHGISACIRSRRFAQ 304 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 LP +IQ G GM T S H + G + Sbjct: 305 LPGLIQIGGNDGMHTIDDSLSHLLRHGFI 333 >UniRef50_B5YIZ9 Twitching motility protein PilT n=4 Tax=Bacteria RepID=B5YIZ9_THEYD Length = 387 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 123/323 (38%), Positives = 193/323 (59%), Gaps = 13/323 (4%) Query: 16 SDLHLCSAWPARWRIRGRMEAAPFDTPDVEELL--------REWLDDDQRAI--LLENGQ 65 SD+ P + G ++ +E L+ +++ +R I L+++G Sbjct: 21 SDIVFTVGRPFQVLHWGELKPVQLKNVPIESLIPFHTERIALILMNNQKRLIENLIKDGY 80 Query: 66 LDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILV 125 D + ++ + R R + F+QR S+ +R LP P +E+L P ++ E+ K GL+LV Sbjct: 81 CDTSYAI-QKARFRVNIFSQRGSYSIVMRKLPVKIPTVEELRLPPIIKEIAKERMGLVLV 139 Query: 126 TGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASG 185 TGATGSGKS+TLAA++ +N+ +HI+TLEDPVE+++ ++ QRE+G+ FA G Sbjct: 140 TGATGSGKSSTLAAILNIINETRASHIITLEDPVEFVHPHKKSTFNQRELGVDFHNFADG 199 Query: 186 LRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQE 245 LRAALR+ P VIL+GE+RD ET+ +A+ AAETGHLVL+TLHT A Q + R+V FP + Sbjct: 200 LRAALRQAPHVILVGEIRDRETLEIAIMAAETGHLVLSTLHTTDAGQTIGRIVGMFPPDD 259 Query: 246 KDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ--LPHVIQ 303 + +R +++ +L+ V+ Q+L +GRVA+ E++ NT V LI G+T + +I+ Sbjct: 260 ESYIRLRISDTLKWVVGQRLLPRIDKGRVAVTEIMRNTLRVRELIINGETAEKTFYDIIE 319 Query: 304 TGQQVGMITFQQSYQHRVGEGRL 326 T + GM TF QS EG + Sbjct: 320 TSEAAGMHTFDQSILKCYKEGLI 342 >UniRef50_Q2ILF7 Twitching motility protein n=5 Tax=Myxococcales RepID=Q2ILF7_ANADE Length = 370 Score = 345 bits (885), Expect = 1e-93, Method: Composition-based stats. Identities = 120/331 (36%), Positives = 186/331 (56%), Gaps = 7/331 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 + L+VK SD+H +P +R+ G + +A P D E + L Sbjct: 12 FHSFLQLAVKRQASDVHFEVGYPPTYRVFGELLSAKYPPLTHADTEAIANFVLQAPGSGF 71 Query: 60 LLEN-GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + ++D + SL R R S F QR +R +P P + L P V+ + ++ Sbjct: 72 TPLDFREVDRSYSLPGVSRFRASIFKQRGSWGAVMRTIPFQIPDFDTLNLPPVIRTIAEA 131 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLI VTGATG+GKSTT+A+++ + Q H++T+EDP+E+++A + L+ QRE+G Sbjct: 132 RRGLICVTGATGNGKSTTVASIINTIIQQERLHVVTVEDPIEFIFAGGKGLVIQREVGSD 191 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +++ LRAALR+DPD+I++GELRD E + L AAETGHLV+ +LHT +AV R+V Sbjct: 192 TASYSDALRAALRQDPDIIMVGELRDREAADICLKAAETGHLVITSLHTPDVPRAVGRIV 251 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREG-KTH 296 FPA E+D VR +LA +L+AV++ +L + G + E L+ T +V LIR+G K + Sbjct: 252 GLFPADEQDSVRARLADNLQAVIALRLLMRADATGLIPAVESLLATTSVRELIRDGSKIN 311 Query: 297 QLPHVIQT-GQQVGMITFQQSYQHRVGEGRL 326 +L + T G +GM +F Q R+ Sbjct: 312 ELRTYMDTAGADLGMHSFDQYLYRLHEAKRI 342 >UniRef50_D2QYW4 Twitching motility protein n=4 Tax=Planctomycetaceae RepID=D2QYW4_9PLAN Length = 395 Score = 343 bits (880), Expect = 6e-93, Method: Composition-based stats. Identities = 111/334 (33%), Positives = 177/334 (52%), Gaps = 8/334 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQR 57 + +++ VK SDLH+ P R+R + + + +LL ++D R Sbjct: 32 LEVDKFFRALVKFEGSDLHMKVGRPPMIRVRNELRPLNHPNIERIEMAKLLVPMMNDRNR 91 Query: 58 AILLENGQLDFAVSL---AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 I + G DF+ S R R + Q + L R + + P E L P + + Sbjct: 92 RIFDDEGGADFSHSCDVDGTTWRFRVNLLQQNGCMGLVARRINNKIPNFEGLFLPAAIEK 151 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L + G++L+ G TGSGKSTT+A+M+ ++N+ HILTLEDP+E+++ + LI QRE Sbjct: 152 LCFYDQGMVLLAGVTGSGKSTTIASMLDFINRRERIHILTLEDPIEFIFTEDKSLINQRE 211 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 IG F ++ A+REDPDV+L+GE+RD ET A+ AAETGHLV T+H A + Sbjct: 212 IGFDVKDFKIAMKHAVREDPDVMLVGEMRDEETFMTAIHAAETGHLVFGTIHASSAPSTI 271 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG--RVALFELLINTPAVGNLIRE 292 R++D FP +R+ +A +++ +++QKL + G RV E++ TP + L+ E Sbjct: 272 GRILDLFPEAMHKAIRSAIAFNMKGIVAQKLLKSIKPGVPRVPTCEIMTFTPMIKKLVLE 331 Query: 293 GKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +LP I+ G GM F S + + +G + Sbjct: 332 SHDSKLPDAIRIGAADGMQDFTMSLKQLIDDGLI 365 >UniRef50_A9LZU9 Twitching motility protein PilU n=30 Tax=Neisseriaceae RepID=A9LZU9_NEIM0 Length = 408 Score = 339 bits (870), Expect = 9e-92, Method: Composition-based stats. Identities = 97/328 (29%), Positives = 187/328 (57%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRAI 59 ++ + + N SD+ + +P +I + P + + ++ +Q I Sbjct: 39 LDRLCETAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEI 98 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 +G+++++V R R +A+ + L LR + PQ+++LG P L +L + Sbjct: 99 FRRDGEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAP 158 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+++ G TGSGKSTT+A M+ + N+ +HI+T+EDP+E++Y +RC+ QREIG+ Sbjct: 159 RGLLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT 218 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 + + + ++ A+R+ PDV+ +GE+R E++ A+ A+TGHL + TLH A Q++ER+++ Sbjct: 219 INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERILN 278 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 +P ++ + + +A +L ++ Q+L + + + GR A+ +LLINTPA+ + I +G + Sbjct: 279 FYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGDLMNI 338 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++T + GM T Q+ G + Sbjct: 339 SKIMETAKTDGMQTMDQNLFELYRHGII 366 >UniRef50_C0FXQ3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FXQ3_9FIRM Length = 360 Score = 338 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 118/329 (35%), Positives = 196/329 (59%), Gaps = 5/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRA 58 +I+ + K SD+H RI GR+ + + +EEL+ + LD Q+ Sbjct: 11 EFHKILEEAGKKGASDIHYVPKEQLLLRIDGRLVDMTEEWNVSFSMEELIEKLLDKKQQK 70 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 ENG+++F+ + N+R+R + F Q ++++RL P + LG P ++ Sbjct: 71 TFEENGEVEFSCPV-FNKRVRVNLFRQSGTCAMSVRLFAEKIPTPQMLGLPESAVQMAGK 129 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLILVTGA+GSG++TT+A+M+ ++ + + ILTLE P EYL+ S + ++ QREIG+ Sbjct: 130 RRGLILVTGASGSGRTTTMASMIDHIASNYERSILTLEKPAEYLFRSGKSMVLQREIGID 189 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++ +GL+AAL++D DVIL+ E+ D +T+ LALTAAE GHLV+A L TR A ++ER+V Sbjct: 190 SRSYEAGLKAALKQDMDVILISEMEDLDTVSLALTAAEMGHLVIAALPTRNAVASIERVV 249 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKTHQ 297 + FP + +R+QL+ L V+SQ+L GRVA FE+L+ + +LI+E K Q Sbjct: 250 ECFPDHRQHQIRSQLSDVLAGVISQQLLPRLDGGGRVAAFEVLLANQEIKSLIKEQKYFQ 309 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P V+++ ++ GM++ + + + Sbjct: 310 IPSVMRSCRKEGMVSMDDAVYDLYMKSMI 338 >UniRef50_B5YDI2 Type IV pilus assembly protein PilB n=20 Tax=Bacteria RepID=B5YDI2_DICT6 Length = 873 Score = 338 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 108/381 (28%), Positives = 171/381 (44%), Gaps = 72/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +VK SD+H+ R+RI G + F + + + D Sbjct: 492 VNSILVDAVKRGASDIHIEPTEKNVRVRFRIDGVLHEIMFIQKRFQAAIVSRIKIMSDMD 551 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTV- 111 + ++G++ + E R S G + LR+L S LE LG Sbjct: 552 ISERRIPQDGRIKANIK-GEVYDFRVSTLPGVFGEKVVLRILGRGSISLSLESLGFSEHN 610 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++LK+ G+ILVTG TGSGKSTTL A + +N D +I+T+EDPVEY Sbjct: 611 YERYLKMLKTPYGIILVTGPTGSGKSTTLYASLNMINS-PDINIITVEDPVEYQLPGIHQ 669 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR+ LR+DPDV+L+GE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 670 VQVNPKAGL---TFASALRSILRQDPDVVLVGEIRDEETARIAIQAALTGHLVLSTLHTN 726 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL+D ++ SL ++Q+L Sbjct: 727 DAPSAVTRLIDMGIE------PFLISSSLLGAVAQRLVRTICPNCKAPYEPTKEEIEAIK 780 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR A+ E+++ + +L+ + + + + + Sbjct: 781 ATLGDIDLSNVTFYKGKGCPKCNGKGYKGRTAIHEIMLMNDEIRDLVLKKASRE--TIKE 838 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 ++ GM+T ++ +V +G Sbjct: 839 VARKHGMVTLREDGMQKVLKG 859 >UniRef50_B8D2C7 Tfp pilus assembly protein PilB n=5 Tax=Firmicutes RepID=B8D2C7_HALOH Length = 558 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 108/371 (29%), Positives = 173/371 (46%), Gaps = 65/371 (17%) Query: 6 IVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I+ +++ SD+H+ R+R+ G + + L L D Sbjct: 189 IINQAIQMKASDIHIEPQEDQVRVRYRVDGVLRENMTVPKHSQAALISRLKIIADLDITE 248 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV---- 111 + ++G+++ VS +R S +G + +RLL Q+EQLG Sbjct: 249 RRVPQDGRIELNVS-GVKIDMRVSTLPTVYGEKVVIRLLNKEEKLLQIEQLGFSETNLSR 307 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 +L+K +G+ILVTG TGSGKSTTL A + LN + +I+T+EDPVEY + Sbjct: 308 FMKLIKQPHGIILVTGPTGSGKSTTLFAALNKLNT-PEKNIITVEDPVEYQLRGINQVQA 366 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 +GL TFAS LR+ LR+DPD++++GE+RD ET R+A+ AA TGHLVL+TLHT A Sbjct: 367 NSRVGL---TFASALRSILRQDPDIVMVGEIRDEETARIAVRAALTGHLVLSTLHTNDAV 423 Query: 232 QAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------------- 268 +V RL+D +A S+ V++Q+L Sbjct: 424 SSVTRLIDMGIP------PYLVASSVIGVVAQRLVRRLCTCKEEYVPGPEEMEFLQVNDI 477 Query: 269 ---------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITF 313 GR+ + E+LI + +I G+ + + + ++ GM+T Sbjct: 478 GKLQRPEGCKKCHSTGYRGRLPVHEILIMDRKLREMIVNGEGESV--IKKYARKAGMLTL 535 Query: 314 QQSYQHRVGEG 324 ++ ++V EG Sbjct: 536 KEDGVNKVIEG 546 >UniRef50_B2V7A9 Type II secretion system protein E n=5 Tax=Aquificales RepID=B2V7A9_SULSY Length = 577 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 103/382 (26%), Positives = 169/382 (44%), Gaps = 73/382 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+A ++ SD+H+ R+R+ G + +++ + + D Sbjct: 196 VNAIIAEAINLGASDIHIEPMEKELKIRFRVDGILRTYKSWPAHIKDAIAARIKILANLD 255 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC---PQLEQLGAPT- 110 L ++G++ F V+ LR S +G + +RL + +LE LG Sbjct: 256 ISEKRLPQDGRIRFRVN-NRKYDLRISTLPTVYGEKIVMRLQDAESYLNVKLENLGFEED 314 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 ++ E + S G++LVTG TGSGK+TTL + + N D +I+T+EDPVE Sbjct: 315 DLKIVREAIYSPWGMVLVTGPTGSGKTTTLYSALMERNTD-DVNIMTVEDPVEVSIPGIN 373 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + EIGL TFA+ LRA LR+DPD+IL+GE+RD ET +A+ AA TGHLV +TLHT Sbjct: 374 QVQVKEEIGL---TFAAALRAFLRQDPDIILVGEIRDRETAEIAVKAALTGHLVFSTLHT 430 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A + RLVD + ++ ++ +++Q+L Sbjct: 431 NDAPSTITRLVDIGVD------KFLVSTAVHTIIAQRLIRKLCNNCKEPANYTPEVLKTF 484 Query: 268 -------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR A+ E+L + I EGKT + Sbjct: 485 GFSDEDIQTGQFFVHHPKGCDKCNGTGYKGRTAVHEILKLDENIRKAINEGKTAD--ELK 542 Query: 303 QTGQQVGMITFQQSYQHRVGEG 324 + + GM T + ++ +G Sbjct: 543 EIAIKTGMRTLYKDGLIKMKKG 564 >UniRef50_C8X268 Type IV-A pilus assembly ATPase PilB n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X268_DESRD Length = 571 Score = 337 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 104/379 (27%), Positives = 171/379 (45%), Gaps = 69/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +++ SD+H+ + R+RI G ++ + + L D Sbjct: 193 VNLIIMDAIRKKASDIHIEPYEELFRVRFRIDGVLQEVMRPPMRLRNAIISRLKIMSHMD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 L ++G++ R S +G + +RLL L+ LG Sbjct: 253 IAERRLPQDGRVKVRTPGGLEVEFRVSVLPLLYGEKVVMRLLDKSSLNLDLRDLGLEDSA 312 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L + G+ILVTG TGSGK+TTL + + LN+ + +I T EDPVEY Sbjct: 313 LEILQRAIIKPYGMILVTGPTGSGKTTTLYSAIMELNKQ-EVNIATAEDPVEYSLEGVNQ 371 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TFA LR+ LR+DPD+IL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 372 VQVRDDIGL---TFAGALRSFLRQDPDIILVGEIRDLETAEIAVKAAMTGHLVLSTLHTN 428 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + + RL++ + +A S+ A+++Q+L Sbjct: 429 DAPRTLTRLMNMGVEE------YLIASSVNAIVAQRLVRKLCPFCKQDTELSQPVLDALG 482 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR+ L+E+L T + LI + + +PH+ Sbjct: 483 IDPATWDDSQVCAPRGCPKCNNTGYKGRIGLYEVLEVTETMQELILQRAS--VPHIHALA 540 Query: 306 QQVGMITFQQSYQHRVGEG 324 + GM+T +QS ++ +G Sbjct: 541 IEEGMLTMRQSGIEKIRQG 559 >UniRef50_C9KK06 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK06_9FIRM Length = 349 Score = 337 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 135/328 (41%), Positives = 203/328 (61%), Gaps = 6/328 (1%) Query: 4 EEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPD--VEELLREWLDDDQRA 58 + I+ +++ +D++L R+ G R+ A + D +E + L QR Sbjct: 10 DAILMEAIEACANDIYLTVGQAVWLRVDGSLCRLSRAEWQPDDAFMESMAEVLLSPAQRE 69 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L E +DF+++ A +RLRG+ + Q+ +++ LRLLPS P L + AP L LL++ Sbjct: 70 SLREGHAIDFSLAHAG-RRLRGNLYRQQAHLAMVLRLLPSSIPTLAAIHAPQALQGLLEA 128 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGK+TT+A+ + +N+ AHILTLEDP+EY++ RC I QRE+G Sbjct: 129 RQGLVLVTGRTGSGKTTTMASFLQAVNESRAAHILTLEDPIEYVFTPSRCFISQRELGRD 188 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F LR+ALRE PD++L+GE+RD ET+ AL AAETG LVL TLHTRGAA+AV R+ Sbjct: 189 FRSFPEALRSALREMPDILLVGEIRDCETMTTALAAAETGMLVLGTLHTRGAAEAVRRIE 248 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + +++ VR Q+A A+ +Q+L ++EGRV L E+L+ P+V +LIR+GK Q+ Sbjct: 249 GFYLQEQQSIVRAQVADVFCAIFAQELLPARKEGRVPLVEVLLREPSVASLIRQGKYSQI 308 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + T Q GM T Q+ Q + +G + Sbjct: 309 EMAMMTHQAQGMQTRAQALQKLLQQGLI 336 >UniRef50_A6GE25 Twitching motility protein n=2 Tax=Proteobacteria RepID=A6GE25_9DELT Length = 530 Score = 336 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 142/331 (42%), Positives = 193/331 (58%), Gaps = 7/331 (2%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRA 58 + E++ +V +D+ L + R+ G + A F D++ E L QR Sbjct: 179 ELAELLERAVLQRATDVFLSARGEVHLRVGGNIVELADANFGALDLDAAFGE-LPGHQRE 237 Query: 59 ILLENGQLDFAVSLAEN---QRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 +L +G +DFA R R + F Q G++ ALR + + P L +LG L L Sbjct: 238 LLATSGSVDFAALAGYGPTALRFRVNLFRQLGGLAAALRPVRRNPPTLRELGLGGELDSL 297 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 +GL+L+TG GSGKSTTL A++ +N+ A HI+TLEDP+EY+Y R LI QRE+ Sbjct: 298 TAHRDGLVLMTGPAGSGKSTTLVALLEAINRSAPKHIITLEDPIEYVYPPGRALIHQREL 357 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G+H +F +GLRAALRE PD+IL+GE+RD ETI+ ALTAAETGHLVL+TLH AA A+ Sbjct: 358 GVHVESFQAGLRAALRESPDIILVGEMRDPETIQAALTAAETGHLVLSTLHCSDAASAIH 417 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R+VD+FP VR QLAGSLRAV++Q L + V +EL+ V IR+ + Sbjct: 418 RIVDAFPEHRHALVREQLAGSLRAVVTQLLLPGLRSPLVPAYELMRVNTPVATKIRDSRA 477 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQL IQ G+Q GMI + V E RL Sbjct: 478 HQLRSEIQKGRQDGMIALEAVLARLVRERRL 508 >UniRef50_A6DJN8 General secretory pathway protein E n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJN8_9BACT Length = 517 Score = 335 bits (861), Expect = 9e-91, Method: Composition-based stats. Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 47/356 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + +V+ SD+H+ R+RI G + + L + Sbjct: 161 VNDVFSRAVELGASDIHVEPGDGQLNIRYRIDGILHTHFTPPFQQFAAISSRLKLIGGLN 220 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 + ++G+++ ++S + +R + +G S+ +RLL + LE +G VL Sbjct: 221 IAERRIPQDGRIELSIS-GKAIDVRMNTLPGMYGESIVMRLLQKNLQDFTLESIGMSAVL 279 Query: 113 PEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +K GL+LV G TGSGK+TTL + LN + I+T+EDP+EY Sbjct: 280 KDKFIAKIKKPYGLVLVVGPTGSGKTTTLYCALNILNS-GNEKIITIEDPIEYQINGITQ 338 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++ IGL +FA GLR+ +R+DPD+IL+GE+RD ET +++ AA TGHLVL+TLHT Sbjct: 339 VQVKKSIGL---SFADGLRSIVRQDPDIILVGEIRDKETAEISINAALTGHLVLSTLHTN 395 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA A+ RL D +A SL AVLSQ+L Sbjct: 396 DAAGAISRLQDMGVEN------FLIASSLVAVLSQRLLRRVCSACGGKEENFPCRKCANT 449 Query: 269 KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 +GRV ++E L + N + E K + I GM T ++ +V G Sbjct: 450 GYKGRVGVYEFLEVNQRIQNAVMEQKDSGQINAIAVS--QGMQTIAENANEKVEAG 503 >UniRef50_A8VZF7 Tfp pilus assembly protein pilus retraction ATPase PilT-like protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VZF7_9BACI Length = 311 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 111/244 (45%), Positives = 151/244 (61%), Gaps = 3/244 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAI 59 +EE++ + SDLH+ P R G +E D D E + R + + Sbjct: 5 IEELLRKAFYDGASDLHITVGVPPVMRTNGELEKVGTDMMKPADTEGMARAIIPEALWKN 64 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + G+LDF+ L R R +A+ QR +SLA+R++P+ P ++ L P +L + Sbjct: 65 FEKKGELDFSYGLRGVSRFRVNAYFQRSCVSLAIRVIPTVIPTIDDLNMPKILESIASKP 124 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLAAM+ Y+N + HI+TLEDP+EYL+ +I QREIG Sbjct: 125 QGLVLVTGPTGSGKSTTLAAMISYMNTRMNRHIITLEDPIEYLHKHGTSVIDQREIGFDT 184 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 FA+GLRAALR+DPDVIL+GE+RD ETI A+TAAETGHLVL TLHT A ++R++D Sbjct: 185 QNFANGLRAALRQDPDVILVGEMRDLETISTAITAAETGHLVLGTLHTTNAPSTIDRIID 244 Query: 240 SFPA 243 FP Sbjct: 245 VFPP 248 >UniRef50_C0AEU6 Type IV pilus retraction protein PilT n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0AEU6_9BACT Length = 352 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 122/323 (37%), Positives = 182/323 (56%), Gaps = 4/323 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 + +++A + +H SDLHL RI G + PF + L++ QR Sbjct: 5 LSQLLAAASEHKASDLHLIVGVAPTLRIHGEIILANHDPFSADISRAITDTLLNEKQREA 64 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + +L ++ + R+R + + + ++R ++LG P + ++ + Sbjct: 65 FARDWELCISLLHPDAGRVRVTIYRRNGIPEYSIRFCGDRIYTRDELGLPAKIDDIARRR 124 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 NGLILVTG TGSGK+TTL MV +N I+T+EDP+E+++++ R +I Q+E+ Sbjct: 125 NGLILVTGPTGSGKTTTLNYMVDLINSERRCKIITIEDPIEHVHSNNRAIIVQQEVLSDT 184 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA L ALR+DPDVI++GE+RD I ALTAAETGHLVLATLH+ A+ A+ER++ Sbjct: 185 HSFARALNHALRQDPDVIVVGEMRDHAAIMTALTAAETGHLVLATLHSPTASHAIERIIG 244 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 S+ + V QLA SL+A+L+Q L + RV ELLI PAV N+IRE K HQL Sbjct: 245 SYEGNAQRQVILQLANSLQAILAQDLVPGVDQTRRVLACELLIPNPAVRNIIRENKLHQL 304 Query: 299 PHVIQTGQQVGMITFQQSYQHRV 321 + +QTG + GMI S Sbjct: 305 VNSLQTGSREGMILMDDSLHDLY 327 >UniRef50_C4XHR9 Putative twitching mobility protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XHR9_DESMR Length = 410 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 139/326 (42%), Positives = 199/326 (61%), Gaps = 5/326 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRA 58 + +VA V+ NVSDLHL + PA R G++ F +++ELL D QR Sbjct: 3 KFKRLVASCVRSNVSDLHLRADKPAAARKNGQLHFQRDIVFSAAELDELLTSLTTDRQRR 62 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 IL E +DF+ L E+Q +R +AF G+ LA+R LP+ P E L L L Sbjct: 63 ILAERWSVDFSARLTESQ-MRLNAFHTADGLGLAVRFLPASAPSFEDLNLHPSLRALCAR 121 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLIL+ G TG+GKSTT+AAM+ +N+ AH++TLEDP+EY + S R LI QRE+G H Sbjct: 122 PFGLILICGPTGNGKSTTIAAMLREINETRPAHVVTLEDPIEYRFVSDRSLIDQRELGAH 181 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F GL+ LRED DVI++GELR+ ET+RL + AAE+GHLV+ATLH A +A+ RL Sbjct: 182 FQSFEQGLQDVLREDADVIVVGELREPETMRLTVNAAESGHLVIATLHAATAEEALLRLC 241 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG-RVALFELLINTPAVGNLIREGKTHQ 297 ++F +D VR+QLA L AV+ Q LE + G R + + ++ PA+ N+IRE + +Q Sbjct: 242 NAFAPDTQDFVRSQLASCLCAVVVQHLEFLPKAGFRAPVLSMAVSAPALRNIIRENRFNQ 301 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGE 323 + ++ Q G+ GM TF++ Q + Sbjct: 302 IENLQQAGRADGMFTFERYRQEFLEA 327 >UniRef50_A5TVA4 Possible pilus assembly ATP-binding protein n=8 Tax=Fusobacterium RepID=A5TVA4_FUSNP Length = 316 Score = 334 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 119/321 (37%), Positives = 196/321 (61%), Gaps = 11/321 (3%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 M++E+I + ++N+SD+HL +R G + + ++ L E + Sbjct: 1 MDIEKIFDYARENNISDIHLLEGEKIYFRKDGEIIEYDKNIIISKDELLEICNGKIEE-- 58 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE-LLKSE 119 DFA + ++NQR R ++F R ++L +R++ +L+ ++ E +L + Sbjct: 59 ------DFAYTDSKNQRYRVNSFLTRGKLALVIRIINKEPIKLKGKFINKLIDEKILSLK 112 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +GL+LVTG TGSGKSTTLA ++ N++ + ILT+EDP+EY++ +++ LI QRE+G Sbjct: 113 DGLVLVTGITGSGKSTTLANIIEKFNENKNLKILTIEDPIEYIFENKKSLIIQRELGKDV 172 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F L+++LR+DPDVI+LGE+RD E++ AL AETGHLV +TLHT ++V RL+ Sbjct: 173 ESFEKALKSSLRQDPDVIILGEIRDEESLYSALKLAETGHLVFSTLHTINTVESVNRLIS 232 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 +++KD +R QLA LR +LSQ+L + V +FE+L NT AV NLI K +Q+P Sbjct: 233 MVRSEKKDFIREQLASVLRFILSQELHR--GKKNVPIFEILNNTKAVANLILNNKLNQIP 290 Query: 300 HVIQTGQQVGMITFQQSYQHR 320 +I++G + MIT ++ ++ Sbjct: 291 TLIESGIENFMITKEKYLKNL 311 >UniRef50_C8NB70 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB70_9GAMM Length = 432 Score = 332 bits (853), Expect = 7e-90, Method: Composition-based stats. Identities = 106/330 (32%), Positives = 193/330 (58%), Gaps = 6/330 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP--FDTPDVEELLREWLDDDQRAIL 60 +++VA + + SD+ + S + G++ + DV L+ + Sbjct: 36 FDKLVAHAAEKKASDIFINSENYISIKTDGQLNYTKKYMEEGDVYNLIEVISRPEAFREF 95 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAP--TVLPELLKS 118 L N +L+ V + LR + + Q++ L LRL+P+ P+L+ L P +L ++ Sbjct: 96 LRNHELNMMVEVPNVTYLRVNVYLQKNVPGLVLRLIPAMIPKLDDLELPVPDILKKISMV 155 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 + GL++V GATG+GKSTTLA+M+ + N+++ HI+T+EDP+E+++ ++ ++ QRE+G+ Sbjct: 156 KRGLVIVIGATGNGKSTTLASMIDHRNENSSNHIITVEDPIEFVHKPKKSVVIQREVGID 215 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++ + L+ +LR+ PDVIL+GE+RD +T++ A+ AETGHL LATLH + QA+ER+ Sbjct: 216 TASYGTALKNSLRQAPDVILIGEIRDVDTMQYAMHFAETGHLCLATLHATNSVQALERIY 275 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 + FP +++ ++ +LA +L +++Q+L GR+ E+++NTP + +LI EG Sbjct: 276 NFFPREQRHQIQPELAENLHCLITQRLLPRSDRPGRIVAMEMMMNTPYISHLISEGDLGS 335 Query: 298 LPHVIQTGQ-QVGMITFQQSYQHRVGEGRL 326 +P ++ G G+ TF S G + Sbjct: 336 IPEAMERGNPAEGVFTFDHSIFELYESGVI 365 >UniRef50_Q1ITV6 Twitching motility protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ITV6_ACIBL Length = 391 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 123/332 (37%), Positives = 191/332 (57%), Gaps = 11/332 (3%) Query: 4 EEIVALSVK--HNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQR 57 +E++ +K VSDL + + + A P D + + + ++++ Sbjct: 23 DEMLRTMLKVSEKVSDLIFSPGRAPQVELNSALVAVPGLPTLMPVDTRRIAGDLMGNNEQ 82 Query: 58 AI--LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 A L E G D + SLA R R + F+QR ++ +R++P P EQL P L ++ Sbjct: 83 ATTSLREKGSADLSYSLARESRFRVNIFSQRGSYAIVMRVIPHSVPTFEQLNLPPQLADI 142 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 K NG++LVTG TGSGKS+TLAA++ +N HI+T+EDP+E+L+ ++C I QRE+ Sbjct: 143 TKLINGIVLVTGPTGSGKSSTLAAIINKVNLEKAWHIVTIEDPIEFLHPHKQCTIHQREL 202 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 +FA LRAALR+ P VIL+GE+RD ET+ +AL AAETGHLV++TLHT A++ VE Sbjct: 203 HSDTPSFALALRAALRQAPKVILVGEMRDRETMEIALEAAETGHLVMSTLHTTDASKTVE 262 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++ +FP ++ +R +LA S R ++SQ+L K + GRVA E+L +T + +G+ Sbjct: 263 RIIGTFPISDQHIIRIRLAKSFRYIISQRLMPKKDKTGRVAAIEILKSTIRTREYVEKGE 322 Query: 295 THQ--LPHVIQTGQQVGMITFQQSYQHRVGEG 324 L ++ G GM F + + EG Sbjct: 323 NEGKTLLDAMRDGDLDGMQCFDDVIERMIREG 354 >UniRef50_A5EV69 Twitching motility protein PilU n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EV69_DICNV Length = 406 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 107/330 (32%), Positives = 191/330 (57%), Gaps = 6/330 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 + +V + + SD+ + S + G + + A D DV + + + Sbjct: 12 FDNLVLFAHQREASDIFINSQNNVAVKTNGELHFLQEAFLDEEDVMNIAKAISRPEAFEE 71 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT--VLPELLK 117 L+ + + V + LR + + Q++ + +RL+P+ P +E+L P +L EL Sbjct: 72 FLKTYECNIMVEVPNVTYLRVNIYMQKNMPGIVMRLIPAKIPAIEELNLPQPHILKELSL 131 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+++ GATG+GKSTTLA+MV + N+ HI+T+EDP+E+++ S+ C++ QRE+G+ Sbjct: 132 VKRGLVIIIGATGNGKSTTLASMVDFRNERTKNHIITVEDPIEFMHKSKSCVVIQREVGV 191 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 T+ + L+++LRE PDVIL+GE+RD ET+ A+ AETGHL LATLH + QA+ER+ Sbjct: 192 DTKTYGAALKSSLREAPDVILIGEIRDVETMGYAMQFAETGHLCLATLHATNSVQALERI 251 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 + FP +++ ++ L+ +LR +++Q+L GR E+++NTP + LI +G+ + Sbjct: 252 YNFFPLDQREKLQLDLSENLRCLITQRLIPKIGGGRAVAMEMMMNTPYIQQLIHDGQVDK 311 Query: 298 LPHVIQTG-QQVGMITFQQSYQHRVGEGRL 326 + V++ G G+ +F + EG + Sbjct: 312 IHEVLERGDATRGVFSFDRCIFDLYEEGII 341 >UniRef50_C6BWY7 Type II secretion system protein E n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWY7_DESAD Length = 530 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 100/361 (27%), Positives = 168/361 (46%), Gaps = 52/361 (14%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ SD+H+ R+R+ G + + + + D Sbjct: 169 VNNTFRDAIAQGASDIHISPYEDGLEIRFRVDGILHVVNTVPRKYQAAIISRIKIMSNLD 228 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTVL 112 + ++G++ + ++ +R ++ G + +R+L +++ +G + Sbjct: 229 IAERRIPQDGRIRLKMEQSD-YDIRVASTPTVFGEGVVMRILDKSSIKVDISDVGFEPDM 287 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L+ +G ILVTG TGSGK+TTL A + Y+ + + I+T EDPVEY Sbjct: 288 LETWKSLVHRPHGAILVTGPTGSGKTTTLYASLNYI-KSPELKIITTEDPVEYQLRGIDQ 346 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFA+ LR+ LR+DPDVI++GE+RD ET +A+ ++ TGHLVL+TLHT Sbjct: 347 IQVNPKVGL---TFAAALRSILRQDPDVIMVGEIRDFETAEIAIQSSLTGHLVLSTLHTN 403 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RLV+ A A +L ++Q+L Sbjct: 404 DAPTAITRLVEMGIA------PYLAAPTLAGAMAQRLLRRLCSNCKKQGADGKWQAVGCE 457 Query: 269 -----KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGE 323 +GR+ +FELLINTPA+ LI+ G + + Q+ GM T Q + + Sbjct: 458 VCDGSGYKGRLGIFELLINTPAIQTLIQNGASA--ADIGAQAQKEGMRTLLQDGLAKAAK 515 Query: 324 G 324 G Sbjct: 516 G 516 >UniRef50_B8DPS9 Twitching motility protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPS9_DESVM Length = 433 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 134/325 (41%), Positives = 196/325 (60%), Gaps = 5/325 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRA 58 I++ +V SD+HL +R G + DV++L R L+ + Sbjct: 4 TFHRIISQAVAMGWSDVHLTGGHAVVYRKDGDIGMLRDTVLAPADVDDLARSLLNPHRAD 63 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 IL +DFA ++A R+R + F G+SLA+RLL P L L L E + Sbjct: 64 ILRRRWSVDFAHTVAG-VRVRMNIFNTTRGLSLAVRLLAGRIPTLAHLNLHPSLEEFTRL 122 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLILV GATGSGK+TT+AAM+ +N++ AHI+TLEDP+EY +AS++ ++QRE+G H Sbjct: 123 RAGLILVCGATGSGKTTTMAAMLDEINRNRPAHIITLEDPIEYRFASKKAFVEQRELGAH 182 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F GL LREDPDVIL+GELR++ETIRLAL+AAE+GHLV+A+LH+ +A+ RL Sbjct: 183 FPSFERGLLDVLREDPDVILVGELREAETIRLALSAAESGHLVIASLHSATPEEALYRLC 242 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEV-DKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++FP + ++ VR+QL+ +L AV+ Q+L + RV + +LI T V L+REGK Q Sbjct: 243 NAFPLEAQELVRHQLSSTLHAVVVQQLRMHPVARFRVPVLSMLIGTHPVRMLVREGKFAQ 302 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVG 322 L +++ G+ GM T Y + Sbjct: 303 LHSIMEMGRGDGMFTMGAYYDDYLN 327 >UniRef50_A7HJC2 Type II secretion system protein E n=11 Tax=Thermotogaceae RepID=A7HJC2_FERNB Length = 569 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 116/379 (30%), Positives = 175/379 (46%), Gaps = 71/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + IV+ +++ + SD+H+ R+R+ G + ++ + + D Sbjct: 189 VSNIVSHAIELDASDIHIEPQRKNVVVRYRVDGVLRRITEYPRNMHSAVVSRIKILSGLD 248 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT-- 110 L ++G+ F E LR S HG + +R+L S +LE LG Sbjct: 249 IVERRLPQDGKF-FIKKDEEQFDLRVSTMPSVHGEKVVMRILKVSSSKKKLEDLGYSPYN 307 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +L++ G+ILVTG TGSGKSTTL A++ LN D +I+T EDPVEY Sbjct: 308 YERIKKLIEHPYGIILVTGPTGSGKSTTLVAVINSLNSE-DVNIVTAEDPVEYTVDGITQ 366 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 EIGL TFA LRA LR+DPD+I++GE+RD ET +LA+ A+ TGHLVL+TLHT Sbjct: 367 CQVNAEIGL---TFAKYLRAFLRQDPDIIMVGEIRDKETAQLAVEASLTGHLVLSTLHTN 423 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A++RLV+ + ++ SL V+ Q+L Sbjct: 424 TAAGAIDRLVNMGIE------PSLISASLIGVMGQRLVRKVCPYCKVETELPPEYAEKAK 477 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLI-REGKTHQLPHVIQTG 305 +GR A+ E+LI + LI +E T +L Sbjct: 478 KIFPDMKPIQYVGQGCDKCNNTGYKGRTAVAEVLIVNDEIRRLIQKEASTFELDKA---A 534 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ GMI+ Q ++V G Sbjct: 535 RKNGMISMFQDGLYKVLSG 553 >UniRef50_C0GQP1 Type II secretion system protein E n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQP1_9DELT Length = 563 Score = 330 bits (846), Expect = 5e-89, Method: Composition-based stats. Identities = 112/380 (29%), Positives = 175/380 (46%), Gaps = 72/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +V+ SD+HL R+RI G ++ + + L + D Sbjct: 185 VNRIMTGAVEKKASDIHLEPFEGRIQVRYRIDGILQKFMEMPGHMHQALATRIKIMAGLD 244 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAP--- 109 + ++G++ ++ ++ +R S +G S+ +R+L S LEQLG P Sbjct: 245 IAERRVPQDGRIRSRIA-GKDIDIRVSCLPTVYGESVVMRILDRSSASFTLEQLGFPGRE 303 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + EL+ S +G+ILVTG TGSGK+TTL A + +N I+T+EDPVEY Sbjct: 304 YQLFQELIHSPHGIILVTGPTGSGKTTTLYAALNAINS-IQKKIITVEDPVEYELEGINQ 362 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL +FA GLR+ +R+DPDVIL+GE+RD ET +A+ +A TGHLV +TLHT Sbjct: 363 VHVNPRYGL---SFADGLRSIVRQDPDVILIGEIRDRETADIAIQSALTGHLVFSTLHTN 419 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA AV RL++ LA S+ +++Q+L Sbjct: 420 DAAGAVARLMEIGVED------YLLASSIIGIMAQRLVRILCPECRQPFSPEARILKKYD 473 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKT-HQLPHVIQT 304 GR A+FELL T + LI K+ Q+ + Sbjct: 474 LAADNDLPQELYQPAGCPACSHTGYSGRTAIFELLGITEEIRELIIGNKSAAQIRNA--- 530 Query: 305 GQQVGMITFQQSYQHRVGEG 324 G + GM ++ ++V +G Sbjct: 531 GVKQGMTLLRRDGWNKVKQG 550 >UniRef50_B5YIG2 Type IV-A pilus assembly ATPase PilB n=4 Tax=Bacteria RepID=B5YIG2_THEYD Length = 572 Score = 328 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 105/379 (27%), Positives = 166/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +I+ ++ SD+H+ R+RI G + P ++ L + D Sbjct: 193 VNQIIVNAISKRASDIHIEPFEDNIYIRYRIDGVLHDILTLPPKLKSALITRIKIMANMD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G++ + E R S G + LR+L QL+ +LG Sbjct: 253 ISERRLPQDGRIKMKIGKKE-VDFRVSTLPSIFGEKIVLRILEKGSLQLDLTKLGFEEES 311 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L G+ILVTG TGSGK+TTL + + L + + +I+T+EDPVEY Sbjct: 312 LNFFIEALSKPYGMILVTGPTGSGKTTTLYSSLMKL-RKPEVNIVTVEDPVEYTLPRITQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +IG TFA LR+ LR+DPD+IL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 371 VQVQEDIGR---TFAQVLRSFLRQDPDIILVGEIRDFETAEIAIKAALTGHLVLSTLHTN 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RLV+ +A S+ +++Q+L Sbjct: 428 DAPSTITRLVNMGIE------PFLIASSVILIVAQRLVRKLCESCKKEQKISKETFLKLG 481 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GRVAL+E++ + LI G + + + Sbjct: 482 FPEESFDSLKIYEAQGCAECNQTGYRGRVALYEVMPIKDEIRELILTGAST--NEIKKEA 539 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++GM+T + S ++ G Sbjct: 540 IKLGMLTLRHSGIRKIMAG 558 >UniRef50_C3WJA3 Pilus retraction protein PilT n=2 Tax=Fusobacterium RepID=C3WJA3_9FUSO Length = 317 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 122/319 (38%), Positives = 198/319 (62%), Gaps = 10/319 (3%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLE 62 ME+I + K+N+SD+H+ +R G + A D + L RE + E Sbjct: 1 MEKIFEYARKNNISDIHIIEGERIYFRKDGEIVAY----EDSQSLSREDILKICSGKFEE 56 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE-LLKSENG 121 DFA + ++NQR R ++F + ++L +R++ +L+ V+ E +L ++G Sbjct: 57 ----DFAYTDSKNQRYRINSFFTKGKLALVIRVINDDAIKLKGEFINKVIDEKILALKDG 112 Query: 122 LILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMT 181 L+L++G TGSGKSTTLA ++ N++ ILT+EDP+EY++ +++ LI QRE+G + Sbjct: 113 LVLISGITGSGKSTTLANIIEKFNENKSIKILTIEDPIEYIFENKKSLIIQRELGTDVES 172 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 F L+++LR+DPDVI+LGE+RD E++ AL AETGHLV +TLHT A +++ RL+ Sbjct: 173 FEKALKSSLRQDPDVIVLGEIRDEESLFSALKLAETGHLVFSTLHTMNAVESINRLISMA 232 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQLPH 300 + ++D +R QLA LR + SQ+L DK+ +V A+FE+L NT AV NLI K +Q+P Sbjct: 233 KSDKRDFIREQLASVLRFIFSQELYRDKKTKKVKAIFEILNNTKAVANLIANNKLNQIPS 292 Query: 301 VIQTGQQVGMITFQQSYQH 319 +I++G + MIT ++ ++ Sbjct: 293 LIESGIENYMITKEKYFKK 311 >UniRef50_B6J5I2 Type 4 pili biogenesis protein (Nuleotide-binding protein) n=6 Tax=Coxiella burnetii RepID=B6J5I2_COXB1 Length = 517 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 102/353 (28%), Positives = 166/353 (47%), Gaps = 43/353 (12%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ ++ SD+H + R RI G + + L D Sbjct: 159 VNQVLTDAIYREASDVHFEPMQQHYRIRMRIDGILHTTTLLPNTQSPAMSSRLKVLAELD 218 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAP--- 109 L ++G+ F + R S+ G + +RLL H + E+LG Sbjct: 219 ISEKRLPQDGRFYFTTLTHLKRDCRLSSCPTLFGEKIVIRLLNPVHHLLKFEELGLEEKP 278 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++ + +K GLILVTG T SGK+ +L A + +N +I T+EDP+E A Sbjct: 279 KQLIMKKIKQPQGLILVTGPTRSGKTVSLYAALNQINST-QKNISTVEDPIEIQLAGVTQ 337 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + + GL+ FA+ LRA LR+DPDVI++GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 338 VNIRPKAGLN---FAAVLRAFLRQDPDVIMVGEIRDFETASIAVRAAHTGHLVLSTLHTN 394 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-----------------DKQE 271 A + + RL+D LA L+ V++Q+L ++ + Sbjct: 395 SAVECITRLIDMGIE------PFNLASVLKLVVAQRLVRQLCAHCQATKISCPFCLNRYQ 448 Query: 272 GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 GR ++E+L TP++ LI + ++ Q + Q GM T Q+ ++ G Sbjct: 449 GRTGMYEVLPITPSIIELILQKRSAQ--EINACAIQEGMQTLWQAALNKAKTG 499 >UniRef50_B9XSZ5 Type II secretion system protein E n=1 Tax=bacterium Ellin514 RepID=B9XSZ5_9BACT Length = 401 Score = 327 bits (840), Expect = 2e-88, Method: Composition-based stats. Identities = 120/328 (36%), Positives = 183/328 (55%), Gaps = 5/328 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME--AAPFDTPDVEELLREWLDDDQRA 58 M++ ++A + + SDLHL PA R+RG + AP + + +E + D Sbjct: 1 MDLYSLIATAKANGASDLHLEPTLPAAIRVRGSLRTVGAPIAGKALLDAAQEIIGVDAWP 60 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + LE D + S+ + R R + GI +A+RLL S +E+L +L Sbjct: 61 LFLERRSYDLSKSI-QGVRCRINVLQTSRGIGMAVRLLTSFQATIEKLNLHPDFKKLTNH 119 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 NGLIL++G TGSGKS+T+AA + +N HILT+E P+EYL+ R I+QRE+G Sbjct: 120 SNGLILISGPTGSGKSSTMAAFIQEINLAETRHILTVESPIEYLFKPHRGYIRQREVGRD 179 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F L A+REDPDV+++GE+RD ET+RL L AETGHLVLAT H+ +A++R+V Sbjct: 180 TPSFEQALMDAMREDPDVLMVGEMRDPETMRLTLNVAETGHLVLATAHSGSTIEALQRMV 239 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGR-VALFELLINTPAVGNLIREGKTHQ 297 +FP + ++ V QLA L + Q+L+ V E+LI T V N IR G+ + Sbjct: 240 AAFPPEMQNNVCAQLADCLVVAICQRLQYRADLKLQVPECEVLIPTIPVKNFIRRGEFFK 299 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGR 325 + ++ G + GM T+ Q Y+ + + Sbjct: 300 IMSAMEIGAEQGMWTY-QRYRTWLDSRK 326 >UniRef50_B8FQB2 Type II secretion system protein E n=4 Tax=Clostridiales RepID=B8FQB2_DESHD Length = 573 Score = 327 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 110/377 (29%), Positives = 170/377 (45%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ +V + SD+H+ R+RI G + + + + Sbjct: 195 LNTIIENAVNNFASDIHIEPVDDELRVRFRIDGVLREIMRTPVGMTGPVVSRVKIMADLN 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQ--LGAP--- 109 L ++G++ + V + LR S +G + LR+L LE+ LG Sbjct: 255 IAERRLPQDGRITYLVG-RKMIDLRVSTAPTMYGEKVVLRILDKGSVILEKASLGLQGHN 313 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + EL+ G++LVTG TGSGK+TTL + LN + +I+TLEDPVEY + Sbjct: 314 LELFDELIAKPYGIVLVTGPTGSGKTTTLYTALNQLNT-PEKNIITLEDPVEYNFKGVNQ 372 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA GLR+ LR+DPD+I++GE+RD+ET +A+ +A TGHLVL+T+HT Sbjct: 373 MQVNPKAGL---TFAKGLRSILRQDPDIIMVGEMRDNETAEIAVRSALTGHLVLSTIHTN 429 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RLVD E +P ++ S+ ++SQ+L Sbjct: 430 DAPSAVTRLVD----MEIEPF--LISASVVGIISQRLVRKICPNCVQEYPAELKDYAFLG 483 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR A+FE++ NLI G T + + Sbjct: 484 LSQDFPLKLRRGTGCPYCHDSGYKGRTAIFEIMPIYGGHRNLISRGATAD--ELREYAIS 541 Query: 308 VGMITFQQSYQHRVGEG 324 GMIT ++S V G Sbjct: 542 QGMITLKKSATDLVLNG 558 >UniRef50_A0K2T8 General secretory pathway protein E n=91 Tax=cellular organisms RepID=A0K2T8_BURCH Length = 499 Score = 326 bits (836), Expect = 8e-88, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 55/364 (15%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + + SD+H+ A R+R+ G + + L + D Sbjct: 135 INALLTQAAREQASDIHIEPFENASVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLD 194 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTV- 111 L ++G++ V +R S HG LRLL + LE LG Sbjct: 195 IAEKRLPQDGRITLRVG-GRPVDVRVSTLPTGHGERAVLRLLEKDAQRLNLEALGMGRDT 253 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+ +G++LVTG TGSGK+TTL A + L + A +I+T+EDP+EY + Sbjct: 254 LVQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRL-ETATTNIMTVEDPIEYDLSGIGQ 312 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 IG MTFA LR+ LR+DPDVI++GE+RD ET ++A+ A+ TGHLVLATLHT Sbjct: 313 TQVNERIG---MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTN 369 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA AV RL D LA SL VL+Q+L Sbjct: 370 DAASAVTRLTDMGVE------PYLLASSLLGVLAQRLVRQLCPVCKEERHEDGRTVWHPV 423 Query: 268 -------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR 320 GR ++ELL+ ++ +LI ++ G+ GM T + + Sbjct: 424 GCAKCGHSGYAGRRGVYELLVIDDSIRSLIHRNAAD--AEILAAGRAEGMRTLRDDAERW 481 Query: 321 VGEG 324 + G Sbjct: 482 LASG 485 >UniRef50_C0QER1 PilB n=10 Tax=Proteobacteria RepID=C0QER1_DESAH Length = 739 Score = 325 bits (835), Expect = 9e-88, Method: Composition-based stats. Identities = 102/380 (26%), Positives = 164/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++ VSD+H+ + R+R+ G + A ++ + L D Sbjct: 227 VNGILIKAINDGVSDIHIEPFERSLQVRYRLDGSLYKAMNLPLTIKNAVISRLKILAELD 286 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV- 111 + ++G++ + ++ R S G S+ +R+L L +LG Sbjct: 287 IAERRVPQDGRIKLRFAKNKSVDFRVSTLPTLFGESVVMRILDQSALNVDLSKLGFEADT 346 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + GL+LVTG TGSGK+TTL +++ LN+ D ILT EDPVE+ + Sbjct: 347 FEGIKRCISQPYGLLLVTGPTGSGKTTTLYSILNRLNRE-DTKILTAEDPVEFNFRGINQ 405 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + ++G MTFA+ L++ LR+DPD+I++GE+RD T +A+ AA TGHLV +TLHT Sbjct: 406 VPVKDDVG---MTFAAALKSFLRQDPDIIMVGEIRDINTAEIAIKAAMTGHLVFSTLHTN 462 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + RLVD LA S+ VLSQ+L Sbjct: 463 DCPSTIGRLVDIGIP------PYMLASSVSMVLSQRLARRLCPQCKQVVTGYDPTDLELY 516 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GRV L+EL+ T V I + + Sbjct: 517 GFSKAEIPDLKFYGPKGCANCNGTGYKGRVGLYELMEVTDEVSKAI--NAAVPEDQLRKL 574 Query: 305 GQQVGMITFQQSYQHRVGEG 324 Q GM T + + +V +G Sbjct: 575 AIQEGMKTLRDAGLVKVRQG 594 >UniRef50_P45792 Type IV pilus assembly protein tapB n=47 Tax=Proteobacteria RepID=TAPB_AERHY Length = 568 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 102/379 (26%), Positives = 165/379 (43%), Gaps = 69/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +I+ ++K SDLH + R+RI G + ++ L D Sbjct: 189 INKIMMDAIKRGASDLHFEPYETKYRIRFRIDGILHEIATPPVNLANRFSARLKVMARLD 248 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPT-- 110 L ++G++ +S ++ +R + G + +RLL S +L EQLG Sbjct: 249 IAERRLPQDGRIKLKLSRNKSMDMRVNTLPTMWGEKIVIRLLDSSAARLNIEQLGFDDRQ 308 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L G+ILVTG TGSGK+ +L + LN + +I T EDPVE Sbjct: 309 KAQYLRALSKPQGMILVTGPTGSGKTVSLYTGLNILNTT-EVNISTAEDPVEINLPGVNQ 367 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR+ LR+DPDV+++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 368 VQVNPKAGL---TFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLSTLHTN 424 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA+ + R+++ +A S+ +++Q+L Sbjct: 425 SAAETLTRMMNMGVP------AFNIASSVTLIMAQRLARKLCDHCKAPEVVPEAELLELG 478 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GRV ++E+++ + + LI +G I Sbjct: 479 FTQQQLAAGLRLFKPVGCKDCSGGYKGRVGIYEIMLMSENIAKLIMQGANSLQIAAI--A 536 Query: 306 QQVGMITFQQSYQHRVGEG 324 Q+ GM T + S + G Sbjct: 537 QKEGMRTLRISGLEKARIG 555 >UniRef50_C9LRT0 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LRT0_9FIRM Length = 349 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 139/324 (42%), Positives = 193/324 (59%), Gaps = 5/324 (1%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRAILLE 62 I A SD+HL + R+ G M D+ ++++ L L + ++ L + Sbjct: 9 IFAEGFARGASDVHLAAGQRPFLRLDGEMTPLSEDSLTQKELQDFLAHILTEAEQERLRQ 68 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 LD +++L E + R + ++A+RLLP P L LG P L LL++++GL Sbjct: 69 EKSLDLSLALEE-RHCRAHVYGMSGSWAIAVRLLPREIPALSSLGVPPALFSLLRAQDGL 127 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 ILV G TG+GKSTTLAA + +N+ AHI+TLEDPVEY + +RC I QR +G +F Sbjct: 128 ILVGGRTGAGKSTTLAAFIEEMNKSRAAHIITLEDPVEYAFVPKRCFISQRTLGRDFPSF 187 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 GLR ALREDPDVIL+GE+R+ ET+R+AL AAE+G LVLATLHTR AA+AV R+ F Sbjct: 188 PVGLRDALREDPDVILIGEMRERETVRIALQAAESGCLVLATLHTRDAAEAVLRIEGMFA 247 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +E+ +R+Q A LRA+ SQ+L GRV E L+ PAV NLIR G+ QL I Sbjct: 248 GEEQ-QMRHQFALVLRAIFSQRLLPQSGGGRVLAAEALVAAPAVRNLIRTGRVAQLRGAI 306 Query: 303 QTGQQVGMITFQQSYQHRVGEGRL 326 +G GM T QS + + G++ Sbjct: 307 LSGGAQGMQTMAQSVEGLLRAGKI 330 >UniRef50_B7APV7 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B7APV7_9BACE Length = 566 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 99/376 (26%), Positives = 164/376 (43%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + + SD+H+ + R+R+ G + + + L D Sbjct: 188 VNSIIEQAARQRASDIHIEPFEESIRVRYRVDGVLREVIEYDKSLLGAITARLKIMSGMD 247 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 ++G++ V E +R S +G + +RL Q LG Sbjct: 248 ISEKRKPQDGRITIIVDNRE-YDIRVSNLPTVYGEKVVMRLASKEGFKKQKSDLGLTPTD 306 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +LK+ +G+ILVTG TGSGKSTTL + LN + +I+T+EDPVE Sbjct: 307 LVKFDNILKNPHGIILVTGPTGSGKSTTLYTALSSLNSE-EVNIITVEDPVEANIDGINQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + MTFA+ LR+ LR+DPD+I++GE+RDSET +A+ A+ TGHLV++TLHT Sbjct: 366 VQVNNK---ADMTFANALRSILRQDPDIIMIGEIRDSETAEIAVRASITGHLVVSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RL D +A SL +++Q+L Sbjct: 423 STANSISRLADMGVE------PYLIADSLVGIIAQRLVRRLCECKKPRLATAEEKEELAV 476 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +GR+ ++E++ TP + ++I GK+ + + + Sbjct: 477 DPSEDIVLYEPCGCKMCDNTGYKGRIGIYEIMTITPKIKSMIARGKSAD--EIKEQAIEE 534 Query: 309 GMITFQQSYQHRVGEG 324 GM T + S V +G Sbjct: 535 GMSTLKASAAKYVLDG 550 >UniRef50_Q48JN2 General secretion pathway protein GspE n=3 Tax=Proteobacteria RepID=Q48JN2_PSE14 Length = 472 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 107/363 (29%), Positives = 165/363 (45%), Gaps = 54/363 (14%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + + SD+H+ R+R+ G + + L + D Sbjct: 109 INALLTQAARDEASDIHIEPYESHSVVRYRVDGSLRDVVSPRKALHGSLVSRIKIMAQLD 168 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 L ++G++ V+ +R S HG + +RLL +LE LG Sbjct: 169 IAEKRLPQDGRIALRVA-GRPIDIRVSTVPTGHGERVVMRLLDKQAGRLRLETLGMAPDV 227 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L L++ +G++LVTG TGSGK+T+L A + L+ +ILT+EDPVEY Sbjct: 228 LTRLDNLIRQPHGIVLVTGPTGSGKTTSLYAALARLDASTS-NILTVEDPVEYDLPGISQ 286 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I MTFA LRA LR+DPD+I++GE+RD ET ++A+ A+ TGHLVLATLHT Sbjct: 287 IQVNSKID---MTFALALRAILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTN 343 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + A+ RLVD LA SL VL+Q+L Sbjct: 344 DSVSAINRLVDMGVE------PFLLASSLLGVLAQRLVRRLCPQCRQPDPTASGCWRPQG 397 Query: 269 -------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRV 321 GR + EL V +LI +G Q ++ + GM++ ++ Q V Sbjct: 398 CERCSGTGYSGRTGIHELFCIDDEVRSLIHQGADMQ--ALMGAARNAGMVSMREDGQRWV 455 Query: 322 GEG 324 +G Sbjct: 456 RDG 458 >UniRef50_A8MGF8 Type II secretion system protein E n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGF8_ALKOO Length = 560 Score = 324 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 95/376 (25%), Positives = 167/376 (44%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + I+ +VK SD+H+ R+RI G + + + + + Sbjct: 183 LNSIIEQAVKERASDIHIEPYAEDIRVRFRIDGDLREIMTLAKNSMSGIVTRIKIIGKMN 242 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPT-- 110 + ++G+++ ++ + +R S +G + +RLL + + LG Sbjct: 243 IAEKRIPQDGRVETKIN-GRDIDMRISTLPTVYGEKIVIRLLDRSNFKFTKDALGFSQKD 301 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++L G++LVTG TGSGK+TTL ++ LNQ + +++T+EDPVEY Sbjct: 302 LNLFNQILAQPYGMVLVTGPTGSGKTTTLYTILQELNQ-IEKNVVTIEDPVEYKLKGINQ 360 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFASGLR+ LR+DPD++++GE+RDSET +++ AA TGHLVL+TLHT Sbjct: 361 MQVNIKAGL---TFASGLRSVLRQDPDIVMVGEIRDSETAEISIRAAITGHLVLSTLHTN 417 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + V RL+D ++ +L V+SQ+L Sbjct: 418 DSPSTVSRLIDMGINS------YLVSSALIGVISQRLVKLLCPKCKQIYEGQSLEKKILG 471 Query: 268 -------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 + +GR A+ E++ + + LI + + + + Sbjct: 472 VPEHEKLQLSKAVGCNFCNNGYKGRKAVHEIMPISKNIRQLI--DRRASIDEIRKQAVTE 529 Query: 309 GMITFQQSYQHRVGEG 324 GM + +S G Sbjct: 530 GMHSLLESASRLAING 545 >UniRef50_C0QPL5 General secretion pathway protein E (Type II traffic warden ATPase)(Cholera toxin secretion protein EpsE) n=1 Tax=Persephonella marina EX-H1 RepID=C0QPL5_PERMH Length = 476 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 101/380 (26%), Positives = 165/380 (43%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + + +V+ + SD+H R+R+ G + + + + + Sbjct: 97 LNSLFLKAVRSDASDIHFEPFSDRVVVRFRLDGVLHEVSTIPLNAYPQVVSRIKIISKLN 156 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 L ++G++ + + +R S G + +RLL LE+LG Sbjct: 157 VAEKRLPQDGRIKVKIG-EKKLDMRVSTLPTVFGERVVIRLLDRSDTLLTLEELGFEPDD 215 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++ +GL+LVTG TGSGKSTTL A + L + +I+T+EDPVEY Sbjct: 216 LEKYERIIRKPHGLVLVTGPTGSGKSTTLYASLLKL-KTPRKNIITIEDPVEYQIDGISQ 274 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA+GLR+ LR+DPD++++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 275 IQVNPKIDL---TFANGLRSILRQDPDIVMVGEIRDLETAEIAIHASMTGHLVLSTLHTN 331 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RLVD +A SL V++Q+L Sbjct: 332 DAPSAVARLVDMGVE------PFLVASSLEGVIAQRLVRKICESCKKEYIPRDDEVEEIN 385 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GR+A++E++ + +I K + V + Sbjct: 386 RYMGRELKIGKLYKGEGCDNCLGTGFKGRIAIYEIMEIDEEMRAVI--SKQPESMAVKEK 443 Query: 305 GQQVGMITFQQSYQHRVGEG 324 + GM T Q +V +G Sbjct: 444 ALEKGMRTLIQDGLLKVVKG 463 >UniRef50_Q180E0 Putative type IV pilus-assembly protein n=8 Tax=Clostridium RepID=Q180E0_CLOD6 Length = 459 Score = 323 bits (830), Expect = 3e-87, Method: Composition-based stats. Identities = 101/368 (27%), Positives = 168/368 (45%), Gaps = 60/368 (16%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 E ++ ++K N SD+H+ R R+ G ++ DV L + D Sbjct: 90 FENLLEKAIKENASDIHIEPFKEHLIVRMRVDGELKEVSKFLVDVYPSLSTVIKLKASMD 149 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G++D + +R S+ +G + LR+L + +LG Sbjct: 150 ITEKRLPQDGRVDIKLG-GNLIDIRVSSIPTVYGEKIVLRILNRDTFLKDKLELGFSEEA 208 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++ G++LVTG TGSGK+TT+ +++ L + + +I+T+E+PVEY Sbjct: 209 IKSINRIINKRAGILLVTGPTGSGKTTTVYSLLNDL-KGINKNIMTIENPVEYKMDGISQ 267 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL +F GLRA LR+DPD+I++GE+RD+ET ++A+ AA TGHLV++TLHT Sbjct: 268 IQVNSKVGL---SFDVGLRAILRQDPDIIMVGEIRDAETAKIAVRAAITGHLVISTLHTN 324 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A ++ RL++ L SL V+SQKL Sbjct: 325 DAVSSIARLLEMQIP------PYLLNASLIGVISQKLVRKVCNHCSHEIMIKDNFSGDVN 378 Query: 268 ------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQ 315 GR A++E+L + IR + + Q GMITF+ Sbjct: 379 TKVAVGCEKCNDKGYFGRTAIYEILEINDDIKTCIRNMEDS--STIKDVAQNNGMITFED 436 Query: 316 SYQHRVGE 323 S + + E Sbjct: 437 SCKRLINE 444 >UniRef50_C4Z588 Type IV pilus assembly protein PilB n=9 Tax=Clostridia RepID=C4Z588_EUBE2 Length = 615 Score = 323 bits (830), Expect = 4e-87, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 163/377 (43%), Gaps = 69/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAA------PFDTPDVEELLREWLD 53 + ++ +V+ SD+H+ + R+RI G + + +D Sbjct: 189 INSVIEQAVRQRASDIHIEPMEKSIRVRYRIDGNLREIIDYDNTLLGAITTRIKIMSGMD 248 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQ--LGAPT- 110 ++ ++G++ V +R S +G +R+ +++ LG Sbjct: 249 ISEKRK-PQDGRITLNVD-GREYDIRVSNLPTVYGEKCVMRIASKEGFNIDKSKLGLTPA 306 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 V ++LK+ +G+ILVTG TGSGKSTTL + LN D +I+T+EDPVE Sbjct: 307 DLKVFDDILKNPHGIILVTGPTGSGKSTTLYTALSELNTE-DVNIITVEDPVEANIDGIN 365 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + L TFA+ LR+ LR+DPD+I++GE+RD ET +A+ A+ TGHLV++TLHT Sbjct: 366 QVQVNNKANL---TFATALRSILRQDPDIIMIGEIRDGETAEIAVRASITGHLVVSTLHT 422 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A +V RL D +A SL +++Q+L Sbjct: 423 NSTASSVARLEDMGIES------YLIADSLVGIIAQRLVRKLCDCKMPKEASAAEKEMLG 476 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ ++E++ TP++ LI K + Sbjct: 477 LNPDEPFTVYEPCGCKLCNGTGYYGRLGIYEIMKITPSIKRLI--SKHADAEDIKNQAIS 534 Query: 308 VGMITFQQSYQHRVGEG 324 GM T + + + V EG Sbjct: 535 EGMNTLKMAATNAVKEG 551 >UniRef50_UPI0001BC5494 hypothetical protein F3_04365 n=4 Tax=Fusobacterium RepID=UPI0001BC5494 Length = 322 Score = 323 bits (828), Expect = 6e-87, Method: Composition-based stats. Identities = 112/325 (34%), Positives = 186/325 (57%), Gaps = 7/325 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLE 62 ME++ K SDLH+ +R G + + +L E+ IL E Sbjct: 1 MEKLFVKYRKLGASDLHIREEAKLCYRKDGDLYFSEEVVST--KLFDEFCQ--SLGILKE 56 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL-EQLGAPTVLPELLKSENG 121 + D + + R R + G L++R++ P+ +L VL +L S++G Sbjct: 57 EQERDSSYEDSFGHRYRLNFAKGEKGRMLSVRIISEFLPEFPSELYI--VLKDLFTSKHG 114 Query: 122 LILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMT 181 L+LVTG+TGSGKSTTL + N+ I+ LEDP+E+ Y ++ L QREIG + Sbjct: 115 LVLVTGSTGSGKSTTLRFFLEQYNESYAKKIICLEDPIEFYYQEKKSLFFQREIGRDSES 174 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 F + ++AALR+DPD++L+GE+RD +++ AL+ AE+GHLV +TLHT + + +++ Sbjct: 175 FETAMKAALRQDPDILLIGEIRDLQSLYTALSFAESGHLVFSTLHTGNCVETIHKMISFS 234 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 ++++ +R +L+ SLR ++Q+L K+ GRV +FELL NT AV N+I G+ QLP V Sbjct: 235 SKEKQEEIRQRLSSSLRWTIAQELVKGKEGGRVPIFELLKNTKAVANMISSGREVQLPSV 294 Query: 302 IQTGQQVGMITFQQSYQHRVGEGRL 326 +++ GM + +QS ++ + +G+L Sbjct: 295 LESSASQGMCSKEQSRENWIRKGKL 319 >UniRef50_D2L8D4 Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L8D4_9DELT Length = 413 Score = 322 bits (827), Expect = 8e-87, Method: Composition-based stats. Identities = 128/326 (39%), Positives = 200/326 (61%), Gaps = 5/326 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRA 58 ++V+ V++ ++DLH+ + P R G + FDT +++ LL+ + QR Sbjct: 3 KFTKLVSTCVRNGITDLHIRTGQPVAVRKTGHLHFQREIVFDTAEMDALLKYVTTERQRR 62 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +L E +DF+ + + + ++R +AF G+ LA+R LPS P E L L EL Sbjct: 63 LLAERWSVDFS-TCSSDAQMRLNAFYTADGLGLAVRFLPSVVPDFEALNLHPSLRELCSL 121 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 +GLIL+ G TG+GKSTT+AAM+ +NQ AH++TLEDP+EY + S++ L+ QRE+G H Sbjct: 122 HHGLILICGPTGNGKSTTIAAMIREINQTRSAHVITLEDPIEYRFTSEKALMDQRELGAH 181 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F GL+ LRED DVI++GELRD ET+RL + AAE GHLV+ATLH +A+ RL Sbjct: 182 FPSFEQGLQDVLREDADVIMVGELRDPETMRLTINAAEAGHLVIATLHAGTPEEALLRLC 241 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG-RVALFELLINTPAVGNLIREGKTHQ 297 ++F +D R Q+A SL AV+ Q +E+ + G R + ++ +T +V N+IRE + +Q Sbjct: 242 NAFGEGSQDFARAQIASSLGAVVVQHMEILARVGFRAPVLSIVRSTVSVKNIIRENRFNQ 301 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGE 323 L + Q G+ GM TF++ + + + Sbjct: 302 LESIQQAGRGEGMFTFERYREDFLDQ 327 >UniRef50_A5F5L4 Type IV pilus assembly protein PilB n=41 Tax=Vibrionaceae RepID=A5F5L4_VIBC3 Length = 562 Score = 321 bits (823), Expect = 2e-86, Method: Composition-based stats. Identities = 104/377 (27%), Positives = 165/377 (43%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD--------- 53 + +++ +V+ SD+H + ++RIR R + +T L L Sbjct: 186 INQVLLDAVRKGASDIHF-EPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKL 244 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV 111 D L ++G++ +S +R S G + LRLL S L+ +LG Sbjct: 245 DIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQ 304 Query: 112 LPEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 +L LK G+IL+TG TGSGK+ +L + LN +I T EDPVE + Sbjct: 305 QKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTS-QINISTAEDPVEINLSGIN 363 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + Q +IG FA LR+ LR+DPDV+++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 364 QVQVQPKIGF---GFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHT 420 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 AA+ V RL + LA SL +++Q+L Sbjct: 421 NSAAETVIRLANMGVE------PFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQF 474 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GRV ++E++ + I + + + + + + Sbjct: 475 AFQPNEILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRAS--IHQIERLAKA 532 Query: 308 VGMITFQQSYQHRVGEG 324 GM T Q+S ++ EG Sbjct: 533 NGMQTLQESGLEKLREG 549 >UniRef50_B8CZA0 Type II secretion system protein E n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZA0_HALOH Length = 514 Score = 320 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 108/374 (28%), Positives = 169/374 (45%), Gaps = 65/374 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ ++K SD+H+ R+RI G + P ++ + + Sbjct: 141 VNAIITTALKKGASDIHIEPFEDKLRLRYRIDGVLYENPAPPLELLPAIITRIKIMSELN 200 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTVL 112 L + G++ VS +R S HG + LRLL ++ LG + Sbjct: 201 IAERRLPQEGRIRIRVS-GRELDIRVSIIPALHGEGVVLRLLDKAARLLDIKNLGFSEAM 259 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+ +G+ILVTG TGSGK+TTL A + YLN + I+T+EDPVEY Sbjct: 260 LKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSSS-RKIITIEDPVEYQLEGINQ 318 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + EI FASGLR+ LR DPD+I++GE+RD ET ++A+ AA TGHLVLATLHT Sbjct: 319 IQVKPEINFD---FASGLRSILRHDPDIIMIGEIRDVETAKIAIQAALTGHLVLATLHTN 375 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV RL++ LA +L+ +L+Q+L Sbjct: 376 DAAGAVSRLLNMGVED------YLLAATLKGILAQRLVRVLCPRCKESYQPTSSEVNLID 429 Query: 269 ------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 +GR ++ELL TP + ++I + + + + ++ G Sbjct: 430 DDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASS--SEIKEELKKTGY 487 Query: 311 ITFQQSYQHRVGEG 324 + +V +G Sbjct: 488 TSLFTDGCIKVKDG 501 >UniRef50_A6Q683 Type II secretion system protein E n=3 Tax=Epsilonproteobacteria RepID=A6Q683_SULNB Length = 503 Score = 320 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 108/376 (28%), Positives = 178/376 (47%), Gaps = 68/376 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++K SD+H+ S R RI G ++ + L+ + D Sbjct: 127 VNSLFFQAIKKGASDIHIESGERKGEVRLRIDGALKKHLDLEKSIINLVINRIKVISSLD 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTVL 112 + ++G+ ++S + +R S +G + +R+L H P L++LG L Sbjct: 187 ISEKRVPQDGRTQISIS-GKTLDVRVSVLPTYYGERVVMRILMQSEHIPSLQELGFAEDL 245 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E LL +G+ILVTG TGSGKSTTL A + ++ D +I+T+EDPVEY ++ Sbjct: 246 TEDLYKLLNHAHGMILVTGPTGSGKSTTLHAFLQHIAT-PDKNIITVEDPVEYNASNISQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFA+GLR+ LR+DPD+I++GE+RDSET +AL +A TGHL+L+TLHT Sbjct: 305 IQVNTKVGL---TFAAGLRSILRQDPDIIMVGEIRDSETADIALRSALTGHLLLSTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + ++ RL+D ++ +L VL+Q+L Sbjct: 362 DSTSSLSRLMDMGIEN------FLISATLLGVLAQRLTRKLCVHCKEKALLPSAIAEEIS 415 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREG-KTHQLPHVIQTGQQV 308 +GR A+ EL I V ++++G HQ+ V+ ++ Sbjct: 416 VAVDKLYFRAVGCKECDFTGYKGRQAIGELFIIDDRVKEMMKDGFNDHQVREVM---KKN 472 Query: 309 GMITFQQSYQHRVGEG 324 GM T + + G Sbjct: 473 GMKTIADKLKEMLLSG 488 >UniRef50_Q01NU4 Type II secretion system protein E (GspE) n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NU4_SOLUE Length = 566 Score = 320 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 99/371 (26%), Positives = 163/371 (43%), Gaps = 62/371 (16%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A +++ SD+H+ + R+R+ G + A +++ + L + Sbjct: 195 VNAMIADAIEKRASDIHIEPFEKEFRIRFRVDGVLFAQENPPRELKAAIISRLKLMAKLN 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQL-------G 107 L ++G++ + L LR S +G S+ +RLL L Sbjct: 255 IAERRLPQDGRIKIKI-LGREVDLRVSTLPTLYGESVVMRLLDRSSGDFYDLRRLGFDDH 313 Query: 108 APTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + +G+ LVTG TGSGKSTTL + + +N D I+T+EDPVEY Sbjct: 314 MLRQMEHFTSMPHGIFLVTGPTGSGKSTTLYSALKRIN-LPDKKIITIEDPVEYQMDGIN 372 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + +IGL TFA+GLR +R+DPDVI++GE+RD ET +A+ AA TGHLV ++LHT Sbjct: 373 QIHVNPQIGL---TFAAGLRHIVRQDPDVIMVGEIRDRETADIAIRAALTGHLVFSSLHT 429 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A A+ RLVD + SL AVL+Q+L Sbjct: 430 NDAPSAITRLVDMGVEN------YLITSSLVAVLAQRLVRVICPQCKIFAGEVLSPEGEM 483 Query: 268 --------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITF 313 R+ +FE++ + V LI + + + ++ GM Sbjct: 484 METWRGQGCDHCGGRGYHARMGIFEMMDVSDEVRKLIMGNADASI--LTRAARKNGMRNL 541 Query: 314 QQSYQHRVGEG 324 ++ ++ +G Sbjct: 542 REDGWRKIRDG 552 >UniRef50_Q181B0 Type IV pilus assembly protein n=5 Tax=Clostridium difficile RepID=Q181B0_CLOD6 Length = 561 Score = 320 bits (821), Expect = 4e-86, Method: Composition-based stats. Identities = 106/379 (27%), Positives = 176/379 (46%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRG------RMEAAPFDTPDVEELLREWLD 53 + I+ +V+ SD+H+ + R+RI G RM +AP+ + ++ Sbjct: 183 VNNILENAVRMEASDIHIEQSENYMRVRFRIDGMLREYMRMNSAPYKAVISRIKIMSDIN 242 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGA--- 108 ++ I ++G++ V + R S +A+R+L + E LG Sbjct: 243 ISEKRI-PQDGRIYLKVD-NKPIDFRVSTMPTNRDEKIAMRVLDKSNFMVSKEVLGIDEH 300 Query: 109 -PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + EL+ + GLILV G TGSGK+TTL +M+ LN + ++LT+EDP+EY Sbjct: 301 GSKIYDELINTPYGLILVVGPTGSGKTTTLYSMLNQLNTE-NRNLLTIEDPIEYELPGVN 359 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + GL TFASGLRA +R+DPD+I++GE+RD+ET +A+ A+ TGHLVL+TLH Sbjct: 360 QSQINEKAGL---TFASGLRAFMRQDPDIIMVGEIRDTETAEIAIRASLTGHLVLSTLHA 416 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A A+ RL+D D + S+ V+SQ+L Sbjct: 417 NTAVGAISRLLDM------DVESFLITSSVLGVISQRLTRKICEHCKVSYEADIGEKKAL 470 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR+ +FE+L TP + LI + +++ + Sbjct: 471 GIDVNESVTIYRGKGCERCNNTGYKGRLGIFEMLEITPEIKELI--DSSANQREILKMAR 528 Query: 307 QVGMITFQQSYQHRVGEGR 325 + GM++ ++ +V G+ Sbjct: 529 KQGMVSLKEDIVKKVLNGK 547 >UniRef50_B8FE33 General secretory pathway protein E n=2 Tax=Desulfobacteraceae RepID=B8FE33_DESAA Length = 578 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 100/379 (26%), Positives = 168/379 (44%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ +VK SD+H+ R+R+ G + ++ L + + Sbjct: 200 VNHILSQAVKARASDIHIEPYQTMLKVRYRVDGVLYDLIKPPKRIQSALVSRIKVMAKLN 259 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++G+++ + N +R S G + LRLL +L +G Sbjct: 260 IAEKRLPQDGRIEIRIG-DRNVDIRVSTIPTTFGERIVLRLLDKSTTILKLTDIGFTGEQ 318 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+ G+ILVTG TGSGK+T+L A++ +N D +I+T+EDPVEY + Sbjct: 319 LKTIHGLIHQPYGIILVTGPTGSGKTTSLYAVLSTINTE-DINIITIEDPVEYQISGIGQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA GLR+ +R+DPDVIL+GE+RD ET +A+ ++ TGHLV +TLHT Sbjct: 378 IQVNPKIDL---TFARGLRSVVRQDPDVILIGEIRDMETAEIAVQSSLTGHLVFSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 +A A+ RL+D + ++ S+ AV++Q+L Sbjct: 435 DSASAITRLIDM------NVEPFLISSSVLAVMAQRLVRVLCPHCKEPHTPDEASMAFLK 488 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR +FE++ + +L+ + Sbjct: 489 MTPEDLAKGQIYKPVGCPECLQTGYHGRKGIFEIMPMDRDIKSLLL--TASDANTIKAKA 546 Query: 306 QQVGMITFQQSYQHRVGEG 324 + GMIT +Q ++V G Sbjct: 547 IENGMITLRQDGVNKVLAG 565 >UniRef50_B0TEE9 Type ii secretion system protein e, putative n=12 Tax=Firmicutes RepID=B0TEE9_HELMI Length = 570 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 108/379 (28%), Positives = 163/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + K SD+HL R+R G + L + + Sbjct: 190 VNTILQQAAKEGASDIHLEPQEGGVRVRYRADGILRHVLTLPKAAHPALLSRIKLLAKMN 249 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTVL 112 L ++G++ + + +R S HG +RLL + + QLG + Sbjct: 250 IAEKRLPQDGRIQTKLG-DKMIDMRVSTLPAIHGEKCVIRLLDKSNVRFDLRQLGFRDEV 308 Query: 113 ----PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++++ G+IL+TG TGSGK+TTL A + LN + +I+T+EDPVEY+ Sbjct: 309 LRAYEKIVRNPYGMILITGPTGSGKTTTLYASIHELNT-PEKNIVTVEDPVEYVLDGVNQ 367 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL FASGLR+ LR+DPDVIL+GE+RD ET + + AA TGHLV +TLHT Sbjct: 368 VQVNMRAGLD---FASGLRSILRQDPDVILVGEIRDRETAEIGVRAATTGHLVFSTLHTN 424 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA +V RLVD +A SL V++Q+L Sbjct: 425 DAAGSVNRLVDMGVE------PFLVASSLVGVVAQRLVRRVCANCKRPYTPERGSPERIY 478 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR+A+ E+L T A LI E + + Sbjct: 479 LGVADDAPLTLFRGRGCVACNHTGYKGRLAIHEVLTVTAAQRKLILERASAD--AITAQA 536 Query: 306 QQVGMITFQQSYQHRVGEG 324 GMI +Q +V +G Sbjct: 537 ICDGMIPIRQDGMSKVLQG 555 >UniRef50_A0Q077 General secretion pathway protein E n=3 Tax=Clostridium RepID=A0Q077_CLONN Length = 515 Score = 318 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 102/374 (27%), Positives = 172/374 (45%), Gaps = 66/374 (17%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I+ ++ SD+HL R+RI G + +V L+ + D Sbjct: 140 NSIINQAINKKASDIHLEPFKNKVIVRFRIDGVLNERMTIPKEVYVLVNTRIKIKSGMDI 199 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTV---- 111 + ++ ++G++++ + LR S+ +G + +R+L ++ Sbjct: 200 SKKMIPQDGKMEYEFR-DKTFNLRVSSIPTINGEKIVIRILYKTNKNIDINNLIEDQDDL 258 Query: 112 --LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 + ++L +G+ILVTG TGSGK+TTL +M+ LN + +I+T+EDPVEY + Sbjct: 259 ILIKKILSHPSGIILVTGPTGSGKTTTLCSMLNELNSK-ERNIVTIEDPVEYEIERINQM 317 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 + GL TF+S LR+ LR+DPD I++GE+RD+ET +++ AA TGHLVL+TLHT+ Sbjct: 318 NVNNKAGL---TFSSALRSILRQDPDTIMIGEIRDAETADISVKAAITGHLVLSTLHTKD 374 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 AA RL D + +A SL AV++Q+L Sbjct: 375 AATTPMRLCDM------NVENYLIADSLVAVIAQRLVRKICPYCKEEYILNDREMEFLNI 428 Query: 269 ------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 +GR A+FE++ LIR+G++ + + GM Sbjct: 429 HNKEKVYKGRGCKFCNGSGYKGRRAVFEIMYLDETHRELIRKGQSS--NKIRNYSIKSGM 486 Query: 311 ITFQQSYQHRVGEG 324 + ++S + V G Sbjct: 487 KSIKESCEKLVLSG 500 >UniRef50_B6G0J4 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0J4_9CLOT Length = 402 Score = 318 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 121/388 (31%), Positives = 207/388 (53%), Gaps = 63/388 (16%) Query: 1 MNMEEIVALSVKHNVSDLHLCSA----------------------------------WPA 26 +N++E++ + + SD+H+ Sbjct: 4 LNIKEVILNAKRFEASDIHIICNDYITLRIDGELTKYSSKVVNSDICRKFCDDLIGSEET 63 Query: 27 RWRIR---------GRME-AAPFDTPDVEELLRE--------WLDDDQRAILLENGQLDF 68 ++R R G ++ + FD D+E + +D R I + F Sbjct: 64 KFRKRYEKYIDEECGEVDFSRDFDFVDLENEIENNDTKNNKIMENDINRYIKENVKEFSF 123 Query: 69 -AVSLAEN---------QRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 V L ++ R+R + + + G +++RL+P + ++L P ++ Sbjct: 124 YNVELNKDELNKEDKISFRIRVNIYRRNGGDCISIRLIPGYVKTAKELNIPDIVCSSGDL 183 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 ++G+IL+TGATGSGKSTTLAA++ +N+ + HI+TLE+P+EYL+ S + +I QRE G Sbjct: 184 KSGIILITGATGSGKSTTLAAIIDRINKTSKKHIITLEEPIEYLHKSDKSIISQRECGKD 243 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + F GL+++LR+DPDVI++GE+RD +T+ AL+A+ETGHLVL+T+HT A++A++R+V Sbjct: 244 TVDFLDGLKSSLRQDPDVIMIGEIRDKKTVETALSASETGHLVLSTVHTSKASEAIDRIV 303 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + F A+ +R LA LR V SQ+L GR A+FE++ NT ++ +IREGK + Sbjct: 304 NLFEAERHKEIRGLLANQLRYVFSQRLV-KANNGRRAIFEIMKNTNSIAAMIREGKDESI 362 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +I+TG++ GM F+ + +G + Sbjct: 363 DDMIKTGKKYGMQMFEDQIETLYRDGII 390 >UniRef50_A9EXH6 Putative twitching motility protein PilT n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EXH6_SORC5 Length = 350 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 119/331 (35%), Positives = 184/331 (55%), Gaps = 9/331 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDD-QRA 58 + +++ ++ + SD+HL P R+RG M D D E R L R Sbjct: 11 LHQLLGKALAAHASDIHLKVGQPPGARVRGDMVYFRVDRIRPEDSEAAARVLLAGRPSRE 70 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +L +LD A + R R + + QR +++ LR +P P E+LG P+ + +++ Sbjct: 71 LLATLQELDAAYVVPGLGRFRVNIYRQRGSLAIILRSIPLKIPTFEELGVPSAVRAMVEH 130 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 ++GL+LV G GSGKSTTLAA VG++N HI+TLEDP+E+++ R + QREIG+ Sbjct: 131 DHGLVLVAGTAGSGKSTTLAAFVGHINATVPRHIVTLEDPIEHVHEDNRSSVSQREIGVD 190 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 F + LR+ALR+DPDV+L+ LRD E++ LAL AAETGHLVLA + + +A+ RL+ Sbjct: 191 TADFPTALRSALRQDPDVVLISALRDGESLDLALHAAETGHLVLAAVSSADVTRALARLI 250 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK-TH 296 + VR +LA L+ V++Q+L + G V E+L+ T AV IR + + Sbjct: 251 ALGKSP--SEVRERLADCLQGVVAQRLLPRRDGAGEVLAAEVLVGTAAVREAIRRPEGSP 308 Query: 297 QLPHVIQTG-QQVGMITFQQSYQHRVGEGRL 326 L +++ G GM TF + V +G + Sbjct: 309 SLRELMEKGVTPYGMQTFDAHLRQLVAQGAI 339 >UniRef50_B8FQ85 Type II secretion system protein E n=2 Tax=Desulfitobacterium hafniense RepID=B8FQ85_DESHD Length = 586 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 112/376 (29%), Positives = 174/376 (46%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ ++ SD+H R+RI G++E V + + D Sbjct: 208 VDFLLRDAIMLGASDVHWEPGKTVMRVRYRIDGKLETKRSFPLGVARNVLARIKIMSGMD 267 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 L ++G+ F V A+ LR S+ HG + +R+L L+ LG Sbjct: 268 VAERRLPQDGRSSFMVG-AKTIDLRISSLPTVHGEKIVIRILDQDTAQRSLQSLGMSRGV 326 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+K +G+ILV G TGSGK+TTL A++ L +++++EDPVEY Sbjct: 327 EQSIQRLIKEPHGIILVVGPTGSGKTTTLYALLRELVSE-QLNLVSIEDPVEYQLPGVVS 385 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +IGL TFA GLR+ LR+DPDVI++GE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 386 VQVQPKIGL---TFAQGLRSILRQDPDVIMIGEIRDEETARIAIAAALTGHLVLSTLHTN 442 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA+A RL+D +A LR VLSQ+L Sbjct: 443 TAAEAFTRLLDMGIE------PYLVAAVLRGVLSQRLVRRLCEQCKEPWHLDPLEKDAMD 496 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GR+ + ELL+ + +L+ EG++ + + Sbjct: 497 LPESVRQVFRAKGCPKCRGTGYSGRIGIHELLLYHQDIKDLVLEGQSSG--AIEEKAIAK 554 Query: 309 GMITFQQSYQHRVGEG 324 GMI ++ ++V +G Sbjct: 555 GMIPLRRDGYNKVRQG 570 >UniRef50_Q1Q109 Strongly similar to general secretory system type II protein, ATPase component n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q109_9BACT Length = 582 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 105/376 (27%), Positives = 166/376 (44%), Gaps = 70/376 (18%) Query: 7 VALSVKHNVSDLH---LCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQRA 58 +V SD+H ++ R+RI G + ++ + + D Sbjct: 207 FLYAVLDKASDIHYEAFEDSFRVRYRIDGVLYERVSPPRELGIPINSRIKVMAGMDISER 266 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV----L 112 L ++G++ V + LR S + G S+ +RLL L++LG + + Sbjct: 267 RLPQDGRIKLNVG-GASIDLRVSTLPTKFGESIVMRLLDKSAVSLSLDKLGFRSEELKNI 325 Query: 113 PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQ 172 +LL NG+ILVTG TGSGK+TTL A + YLN+ I+T EDPVEY + Sbjct: 326 YQLLNIPNGIILVTGPTGSGKTTTLYAALNYLNEITT-KIITTEDPVEYDVDGLIQVQVN 384 Query: 173 REIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQ 232 IG+ FAS LR+ LR+DPD+IL+GE+RD ET R+A+ A+ TGHLV +TLHT A Sbjct: 385 PSIGVD---FASCLRSILRQDPDIILVGEIRDEETARIAIQASLTGHLVFSTLHTNDAPL 441 Query: 233 AVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------------ 268 + RL+D +A +L V+SQ+L Sbjct: 442 TITRLIDIGVK------PYLIASTLECVISQRLVRKICASCKEEYEPSDELLNELNLTKA 495 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR+ ++E++ + LI E + + + ++ G Sbjct: 496 IAEGKRFFRGRGCSDCRKIGYRGRMGIYEIMPVNEEIRGLITEQASTNV--IRNVARKNG 553 Query: 310 MITFQQSYQHRVGEGR 325 M T +++ + EG+ Sbjct: 554 MNTLRENGLKAIFEGQ 569 >UniRef50_C6CY56 Type II secretion system protein E n=3 Tax=Bacillales RepID=C6CY56_PAESJ Length = 554 Score = 317 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 101/378 (26%), Positives = 169/378 (44%), Gaps = 70/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + +++ +V+ SD+H+ R+RI G + ++ + L + Sbjct: 177 VNQMIQQAVQLRASDIHVDPGETSVTIRYRIDGVLRTERALPKQMQGFITARLKIMSKLN 236 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAP--- 109 L ++G++ + +R ++ HG + LRLL + ++QLG Sbjct: 237 IAERRLPQDGRMKMQFEF-KTVDIRVASLPTIHGEKIVLRLLDLSTGVKAVDQLGFNNHN 295 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 V E+++ G++L+TG TGSGK+TTL + + +LN+ D +I+T+EDPVEY Sbjct: 296 VQVFKEMIERPYGILLITGPTGSGKTTTLYSALSHLNEE-DTNIITVEDPVEYQLDGINQ 354 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL TFA+GLR+ LR+DP+V+++GE+RD+ET +A+ A+ TGHLVL+TLHT Sbjct: 355 VQVNPAIGL---TFATGLRSILRQDPNVVMVGEIRDTETAEIAIRASLTGHLVLSTLHTN 411 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + ++ R D +A SL V++Q+L Sbjct: 412 DSVSSITRFRDMGVE------PYLIASSLIGVVAQRLVRRICNDCREAQEATDQERLFLR 465 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLI-REGKTHQLPHVIQTGQ 306 GRVA+ E+L + LI G +L + Sbjct: 466 SRGIQSQTVYRGRGCGNCGSTGYRGRVAIHEVLHINNEIRELITLNGSLSELR---EAAA 522 Query: 307 QVGMITFQQSYQHRVGEG 324 + GMI +V G Sbjct: 523 KQGMIQLMDDGLEKVTRG 540 >UniRef50_B2A7G1 Type II secretion system protein E n=5 Tax=Firmicutes RepID=B2A7G1_NATTJ Length = 571 Score = 317 bits (813), Expect = 3e-85, Method: Composition-based stats. Identities = 98/378 (25%), Positives = 169/378 (44%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +V+ + + SD+H+ R+RI G + ++LL + D Sbjct: 189 VNSLVSQAYEQGASDIHIEPTKQGMQIRYRIDGVLHNVATPPRYAKDLLISRVKIMAGMD 248 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTV- 111 + + ++G+ ++ + LR S +G + +RLL L++LG Sbjct: 249 ITKKRIPQDGRSNYNIG-GHEIDLRVSTLPTIYGEKVVIRLLHKDKVIFSLDKLGFQQDN 307 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LLK+ G++LVTG TG GK+TTL + + +N + +I+T+EDPVEY Sbjct: 308 FKLYQGLLKNSAGMVLVTGPTGCGKTTTLYSSLNRINSS-EKNIITIEDPVEYQIEGINQ 366 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA+GLRA LR+DPD+I++GE+RD ET ++A+ +A TGHLV +TLHT Sbjct: 367 VQTNEKGGL---TFANGLRAILRQDPDIIMVGEIRDLETAQIAIRSALTGHLVFSTLHTN 423 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RLVD ++ ++ VLSQ+L Sbjct: 424 NAIATLSRLVDMGIP------PFLVSSAVEGVLSQRLVRIICSNCKIEYSPTAEEQEIYH 477 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR A+ ELLI + +++ + + + + + Sbjct: 478 RYSGEQVDTLYKGKGCTNCNNTGYKGRTAIHELLILDKTLKDMLAREASER--ELTEEAR 535 Query: 307 QVGMITFQQSYQHRVGEG 324 + G ++ +V +G Sbjct: 536 KRGFSYLIENAISKVSQG 553 >UniRef50_B0S8Q3 Type II secretory pathway ATPase, protein E n=7 Tax=Leptospira RepID=B0S8Q3_LEPBA Length = 558 Score = 317 bits (812), Expect = 4e-85, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I++ +V SD+H+ + R+R+ G ++ + + Sbjct: 182 VNVILSQAVSERASDIHIEPFEKSVIVRYRVDGVLQKVLNPPKSYLAGISTRIKIMSNLN 241 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTVL 112 L ++G++ ++ ++ +R S + G + +R+L ++ +G + Sbjct: 242 IAENRLPQDGRIKLRLA-GKDVDVRVSIIPCQFGERIVMRILNKTDQKYSIDTMGFNPQI 300 Query: 113 ----PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 EL+ G+ILVTG TGSGKSTTL + + +N + +I+T EDPVEY Sbjct: 301 LKEFKELIYKPYGIILVTGPTGSGKSTTLYSALSEINTE-ERNIITCEDPVEYQMDGISQ 359 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL TFA+GLR+ LR+DPDV+++GE+RD ET R+A+ A+ TGHLV +TLHT Sbjct: 360 MQMNDKIGL---TFAAGLRSILRQDPDVVMVGEIRDEETARIAIQASLTGHLVFSTLHTN 416 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A+ AV RLVD + S+ ++Q+L Sbjct: 417 DASSAVTRLVDMGIE------PYLITSSVLGFMAQRLVRVICKDCKTSYKPTDKDLAGLG 470 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR L+ELL + I +G + + Sbjct: 471 IQRKELKNGVLYRGKGCSSCLNSGYKGRTGLYELLTMNDEIKRAILQGADA--NRIKELA 528 Query: 306 QQVGMITFQQSYQHRVGEG 324 + G+ Q+ +++V EG Sbjct: 529 VKNGLSVLQEYGKYKVIEG 547 >UniRef50_A3DEG0 Type II secretion system protein E n=5 Tax=Clostridia RepID=A3DEG0_CLOTH Length = 787 Score = 317 bits (812), Expect = 4e-85, Method: Composition-based stats. Identities = 101/378 (26%), Positives = 170/378 (44%), Gaps = 70/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRM-EAAPFDTPDVEELLREW-----LD 53 + I +V SD+H+ R+RI G++ E +D + ++ L+ Sbjct: 409 VNIIFQKAVATRASDIHIEPQEDCVLIRFRIDGQLVEIMRYDRKILSSIVARIKIISGLN 468 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGA--- 108 ++ I ++G++ + E +R S G + +R+ + ++LG Sbjct: 469 IAEKRI-PQDGRIGIKIDDRE-YDMRVSVLPTMFGEKVVIRIADKEGFNVSKKELGFFED 526 Query: 109 -PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 +++ S G+ILVTG TGSGKSTTL + L + + +ILT+EDPVE Sbjct: 527 DLEKFDQIISSPYGIILVTGPTGSGKSTTLYTALRELCK-PNVNILTVEDPVESTIKGIN 585 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFA+ LRA LR+DPD+I++GE+RDSET +A+ AA TGHLV +TLHT Sbjct: 586 QVQVNVKAGL---TFATALRAFLRQDPDIIMVGEIRDSETAEIAIRAAITGHLVFSTLHT 642 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 AA +V R++D L+ +L +++Q+L Sbjct: 643 NDAASSVTRMIDMGIE------PFLLSSALVGLIAQRLVRRLCPHCKEAFQPDKNEREIL 696 Query: 269 ----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR+A++E+L + LI + + + + Sbjct: 697 GLKDDEEVTIYRAKGCDECNNTGYKGRIAVYEILTVNREIKELISKNVSSDV--IKDAAI 754 Query: 307 QVGMITFQQSYQHRVGEG 324 ++GM T + + V EG Sbjct: 755 KMGMKTLRMNCTRLVKEG 772 >UniRef50_A9BY08 General secretory pathway protein E n=2 Tax=Proteobacteria RepID=A9BY08_DELAS Length = 575 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 103/376 (27%), Positives = 167/376 (44%), Gaps = 70/376 (18%) Query: 6 IVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I++ +++ + SD+HL R+R+ G + AA P + + + D Sbjct: 196 IISRAIELHASDIHLEPFEAGLQVRYRMDGVIHAAELVPPRLSAAVGSRVKLLAHLDIAE 255 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP----TV 111 L ++G++ + LR S HG S+ +R+L +LE +G Sbjct: 256 RRLPQDGRIKTR-AKGRELDLRVSTAPTVHGESIVMRVLDRANVRLRLESMGFEVDTLER 314 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 LL +G++LVTG TGSGK+TTL A + ++ ++ I+T+EDPVEY + Sbjct: 315 FNTLLAKPHGIVLVTGPTGSGKTTTLYAALSKIDAVSN-KIITVEDPVEYQLDGINQIQV 373 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 +I L TFA+ LR+ LR+DPD+I++GE+RD ET ++A+ +A TGHLVL+TLHT AA Sbjct: 374 HPQIDL---TFANALRSILRQDPDIIMIGEMRDGETAQIAVQSALTGHLVLSTLHTNTAA 430 Query: 232 QAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------------ 267 AV R+ D + S+ VL+Q+L Sbjct: 431 GAVTRMRDMGVES------YLITSSVNGVLAQRLVRTLCSHCKQPDTLPAAAVEGSGLKR 484 Query: 268 -------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +GR + EL++ + I EG+ H + + Sbjct: 485 FLREGSPIYRAVGCEHCRGTGYKGRTGIHELMVIDEPLRRAIIEGQDANALHAM--AAKS 542 Query: 309 GMITFQQSYQHRVGEG 324 GM++ +V G Sbjct: 543 GMLSLYDDGLRKVASG 558 >UniRef50_C4V5N5 Tfp pilus assembly protein PilT n=2 Tax=Selenomonas RepID=C4V5N5_9FIRM Length = 332 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 133/328 (40%), Positives = 193/328 (58%), Gaps = 6/328 (1%) Query: 1 MNM-EEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD--VEELLREWLDDDQR 57 M + + ++ N SDLH + R G + A F +E+ L +QR Sbjct: 4 MEVWQALLRNMTVWNASDLHAAPCQHVQIRRDGNLMAENFVPSGAFMEQCAECMLSAEQR 63 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 A LL G +DFA + E +R RG+ + G+SLALRLLP +++G P+ L L Sbjct: 64 A-LLRAGDVDFAW-VWEKRRFRGNFYRTHDGLSLALRLLPERIMTPDEIGMPSALRTSLD 121 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + +GL+L+ GATG+GK+TTLAA++ +N AHI+TLEDPVEY++A R QRE+G Sbjct: 122 AHDGLVLLCGATGAGKTTTLAALIDAINHVRSAHIITLEDPVEYIFAPDRSFFSQRELGH 181 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +F + +R+ALREDPD++L+GE+RD T+ AL AA TG LV+ TLH AAQA R+ Sbjct: 182 DFASFPNAVRSALREDPDLLLVGEIRDRATMEAALLAATTGILVVGTLHASSAAQAARRV 241 Query: 238 VDSFPAQEKDPVRNQLAGSL-RAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 FPA +D VR Q A ++ R + Q+L + GRVA FE+L TPAV N++R+G+ Sbjct: 242 ESLFPADVRDAVRAQFADAMQRGIFVQRLLPRRGGGRVAAFEVLSATPAVRNILRQGRYE 301 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEG 324 QL ++ +G GM T + + + G Sbjct: 302 QLTALMMSGSAQGMQTMEAAEELLRRRG 329 >UniRef50_B2SSM0 Type IV-A pilus assembly ATPase PilB n=47 Tax=Proteobacteria RepID=B2SSM0_XANOP Length = 577 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 94/378 (24%), Positives = 166/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +++ SD+H + R RI G ++ + + + L D Sbjct: 199 VNKVLVDAIRRGASDIHFEPYEDDYRVRLRIDGLLKNVAKAPVKLSQRIAARLKVMSQLD 258 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ +S + R S G + LR+L +L ++LG Sbjct: 259 IAEKRVPQDGRIKLNLSKTKQIDFRVSTLPTLFGEKVVLRILDGSAAKLGIDKLGYEPDQ 318 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E + G++LVTG TGSGK+ +L +G LN +I T EDPVE Sbjct: 319 QKLFLEAIHKPYGMVLVTGPTGSGKTVSLYTALGILNDET-RNISTAEDPVEIRLPGVNQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q + G MTFA+ LR+ LR+DPD+I++GE+RD ET +A+ AA+TGH+VL+TLHT Sbjct: 378 VQQNNKRG---MTFAAALRSFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A Q + RL++ A + S+ V++Q+L Sbjct: 435 DAPQTIARLMNMGIA------PYNITSSVTLVIAQRLARRLCNNCKRKSTLPEHALLAEG 488 Query: 269 ----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR +++++ T +G ++ EG + + Q Sbjct: 489 FTPEQVANMELYEAVGCDECTEGYKGRTGIYQVMPMTDEIGAIVLEGGNA--MQIAEAAQ 546 Query: 307 QVGMITFQQSYQHRVGEG 324 ++G+ +QS + +G Sbjct: 547 KIGIRDLRQSALMKASQG 564 >UniRef50_Q1Q644 Strongly similar to general secretion pathway protein E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q644_9BACT Length = 557 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 97/375 (25%), Positives = 155/375 (41%), Gaps = 66/375 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + I+ +++ SD+H+ R+R+ G + ++ + + + Sbjct: 179 VNSILTKAIEVGASDIHIEVFERNTRLRYRVDGVLGELAPPPRELYNSIVSRIKIMAKLN 238 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 L ++G++ V+ + LR S HG + +R+L LE LG Sbjct: 239 IAEKRLPQDGRIRMRVA-GKEIDLRVSIIPMSHGEGIVMRILDRTAVMLDLETLGFQPEF 297 Query: 113 ----PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+ G+ LVTG TGSGK+TTL A++ + + I+T+EDPVEY Sbjct: 298 LKKFRRLISRPEGMFLVTGPTGSGKTTTLYAVLKEIVS-PEVKIITVEDPVEYSMQGVNQ 356 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFASGLR+ LR DPDV+L+GE+RD ET +A+ A+ TGHLV +TLHT Sbjct: 357 IQVNPQIDL---TFASGLRSILRHDPDVVLIGEIRDRETASIAVQASLTGHLVFSTLHTN 413 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 +A A RL+D ++ L VL+Q+L Sbjct: 414 DSASAFTRLMDMGVED------YLISSCLIGVLAQRLVRRLCPKCRELYMPGPEIRKTVG 467 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR + E L+ + L+ K +++ + G Sbjct: 468 LEEGVPLYGPKGCDDCNNTGLKGRRTIAEFLVVDEGIRRLVLAHKDS--SEIMKEAVKKG 525 Query: 310 MITFQQSYQHRVGEG 324 T V G Sbjct: 526 TKTLWDDGLDLVRRG 540 >UniRef50_P45759 Probable general secretion pathway protein E n=31 Tax=Gammaproteobacteria RepID=GSPE_ECOLI Length = 493 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 104/350 (29%), Positives = 159/350 (45%), Gaps = 66/350 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ ++K SD+H+ + R+RI G + + LL + D Sbjct: 112 INAILSEAIKETASDIHIETYEKTMSIRFRIDGVLRTILQPNKKLAALLISRIKVMARLD 171 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAP--- 109 + ++G++ + N +R S +G LRLL + L LG Sbjct: 172 IAEKRIPQDGRISLRIG-RRNIDVRVSTLPSIYGERAVLRLLDKNSLQLSLNNLGMTAAD 230 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L L++ +G+ILVTG TGSGKSTTL A++ LN +ILT+EDPVEY Sbjct: 231 KQDLENLIQLPHGIILVTGPTGSGKSTTLYAILSALNT-PGRNILTVEDPVEYELEGIGQ 289 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + M+FA GLRA LR+DPDV+++GE+RD+ET ++A+ A+ TGHLVL+TLHT Sbjct: 290 TQVNTRVD---MSFARGLRAILRQDPDVVMVGEIRDTETAQIAVQASLTGHLVLSTLHTN 346 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A+ AV RL D L+ SL +++Q+L Sbjct: 347 SASGAVTRLRDMGVES------FLLSSSLAGIIAQRLVRRLCPQCRQFTPVSPQQAQMFK 400 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQ 297 +GR+A+ E+++ TP + I E Q Sbjct: 401 YHQLAVTTIGTPVGCPHCHQSGYQGRMAIHEMMVVTPELRAAIHENVDEQ 450 >UniRef50_B4U620 Type II secretion system protein E n=3 Tax=Aquificaceae RepID=B4U620_HYDS0 Length = 482 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 99/356 (27%), Positives = 158/356 (44%), Gaps = 66/356 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++K SD+H+ R RI G++ T + + + + Sbjct: 105 VNNILLKAIKTGASDIHIEPYEKNVLVRMRIDGKLVVVEELTNGFYQSVLSRIKVIANMN 164 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++ + +S E +R S G + LR+L LE++G Sbjct: 165 VAEKRLPQDARFRIKISKKE-IDIRVSTIPSLFGERVVLRILDQSNTPLDLEEIGLSKEA 223 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++L G+ILVTG TGSGKST+L A + L + +I+T+EDPVEY Sbjct: 224 YEDILDILSRPYGIILVTGPTGSGKSTSLYAFLKRL-KSPSKNIITIEDPVEYQVEGISQ 282 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFASGLR+ LR+DPD+I++GE+RD ET +A+ AA TGHLVL+TLHT+ Sbjct: 283 IQVNPKVGL---TFASGLRSILRQDPDIIMIGEIRDRETAEIAIQAALTGHLVLSTLHTQ 339 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A +V RL D +A S+ +++Q+L Sbjct: 340 NALSSVTRLFDIGIE------PFLIASSIEGLIAQRLVRKICPYCKTSYKPSYVEIKELG 393 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREG-KTHQLPHVIQ 303 +GR+ LFE++ + +LI + + IQ Sbjct: 394 LKEGDYTFYKGLGCEHCMQSGYKGRIGLFEVIKADDRLKSLISQNPSWEYIKSHIQ 449 >UniRef50_B1I3E7 Type II secretion system protein E n=4 Tax=Clostridia RepID=B1I3E7_DESAP Length = 561 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 114/381 (29%), Positives = 168/381 (44%), Gaps = 73/381 (19%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I +V + SD+H+ + R+RI G + + L + D Sbjct: 182 NAIFNQAVWASASDVHIEPLEKSLRVRFRIDGVLHNILQPPRHLHASLVSRIKVMANMDI 241 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTVL- 112 + ++G+ V + +R ++ +G L LRLL LE+LG P + Sbjct: 242 AERRVPQDGRFTLRVE-GKTIDVRVASLPGSYGEKLTLRLLDRSVRLISLEELGFPPEVL 300 Query: 113 ---PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 ++++ GLILVTG TGSGKSTTL A + LN + H++T+EDPVEY + Sbjct: 301 ANYRKVMRRPYGLILVTGPTGSGKSTTLYATLSALNT-PEKHVVTVEDPVEYRLDGVNQI 359 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 GL TFA+GLR+ LR DPD+I++GE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 360 QINPRAGL---TFATGLRSILRNDPDIIMVGEIRDRETARIAVEAALTGHLVLSTLHTND 416 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV---------------------- 267 AA AV RL D A SL AV+ Q+L Sbjct: 417 AAGAVTRLGDMGIE------PFLTASSLVAVVGQRLVRVLCPQCAQSYELGREELLAGVP 470 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GR+ ++ELL+ + + L E + + + Sbjct: 471 DFPLDDGEKTITLYRPGGCLRCSHTGYRGRMGVYELLLVSETIQRLTLERAPAR--EIKE 528 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 GM+TF++ RV +G Sbjct: 529 AAVAEGMVTFRRDGLLRVKQG 549 >UniRef50_B9XM22 Type II secretion system protein E n=1 Tax=bacterium Ellin514 RepID=B9XM22_9BACT Length = 583 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 107/384 (27%), Positives = 173/384 (45%), Gaps = 76/384 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEEL------------LRE 50 + +I+ + K +D+H RIR R++ TP +L + Sbjct: 184 VNQIIWEAFKDRATDIHF-EPSEDELRIRYRIDGILHQTPMPPQLKRYQAALISRIKVMS 242 Query: 51 WLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGA 108 ++ ++ L ++G+++ + E +R S +G S++LRLL LE+LG Sbjct: 243 GMNIAEKR-LPQDGRINVRIK-GEEIDIRVSTVPTVYGESVSLRLLTRGKIFLGLEKLGF 300 Query: 109 PTV----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 V + E++ +G+ LVTG TGSGKST+L A + +N + I+T+E+PVEY Sbjct: 301 APVEETAIREIILKPHGIFLVTGPTGSGKSTSLYAFLSTINSVS-KRIITIEEPVEYELK 359 Query: 165 SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLAT 224 + + +IGL TFA GLR LR+DP+VI++GE+RD ET +A+ AA TGHLV +T Sbjct: 360 GINQIAVRSDIGL---TFAMGLRHILRQDPNVIMVGEIRDLETAEIAIRAALTGHLVFST 416 Query: 225 LHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD---------------- 268 LHT A A RL+D +A S+ AV++Q+L + Sbjct: 417 LHTNDAPSAFTRLIDMGIE------PFLVASSVEAVMAQRLVRNICPGCKTEQKVERDYL 470 Query: 269 ---------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 +GR ++ELL+ + LI + Sbjct: 471 RKIGFPANDIETAKFWRGVGCEECRQLGYQGRQGIYELLLLNEQIRPLILSRAAA--STI 528 Query: 302 IQTGQQVGMITFQQSYQHRVGEGR 325 ++GM T + ++V GR Sbjct: 529 ANRAMELGMRTLRTDGWNKVKAGR 552 >UniRef50_A8ZWZ6 General secretory pathway protein E n=2 Tax=Deltaproteobacteria RepID=A8ZWZ6_DESOH Length = 570 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 116/379 (30%), Positives = 179/379 (47%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + IVA SVK SD+H+ + + R+R+ G + ++ L + + Sbjct: 192 VNHIVAQSVKAEASDIHIEAYQDTFKIRYRVDGILYDFLSPPKRIQPALVSRIKVMAKMN 251 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAP--- 109 L ++G++ + E +R S+ G L LRLL S L+++G Sbjct: 252 IAEKRLPQDGRMQVRLGDKE-VDIRVSSIPITAGERLVLRLLNKASSMLGLQEIGFSRQT 310 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L++ NG+ILVTG TGSGK+TTL A + +N D +I+T+EDPVEY + Sbjct: 311 FDLFSRLIRYSNGIILVTGPTGSGKTTTLYAALSTINT-PDINIITIEDPVEYQVSGINQ 369 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++IGL TFA GLR+ +R+DPDVIL+GE+RD ET +A+ +A TGHLV +TLHT Sbjct: 370 IQVNQKIGL---TFARGLRSIVRQDPDVILIGEIRDQETADIAVQSALTGHLVFSTLHTN 426 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 +A AV RLVD L+ S+ AV++Q+L Sbjct: 427 DSASAVTRLVDIGVE------PFLLSSSVIAVIAQRLVRVLCPRCKEAYVPDDSAILSIG 480 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+A+FE+L+ + ++ TH + Sbjct: 481 ASVELFAGKTIYRKTGCDHCLGTGYSGRIAIFEILVMDEKIKKMVL--TTHDSGRIEAAA 538 Query: 306 QQVGMITFQQSYQHRVGEG 324 + GMIT +Q H+V +G Sbjct: 539 VKHGMITLRQDGIHKVLDG 557 >UniRef50_D1N174 Type II secretion system protein E n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N174_9BACT Length = 534 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 105/359 (29%), Positives = 165/359 (45%), Gaps = 50/359 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ +++ SD+H+ R R+ G + + + + Sbjct: 175 VNDVFNRAIELGASDIHVEPGEDSVSIRCRVDGVLAEIMNVPRSQFPAIASRIKLIAGLN 234 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 + L ++G+ +F V + +R S G S+ LRLL + + LG Sbjct: 235 IAESRLPQDGRTNFQVGRVK-LDMRVSTIPILTGESIVLRLLNNDAVTFDLRTLGMSDRD 293 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 EL++ +G+ILV G TGSGK+TTL +++ LN H I+T+EDPVEY A Sbjct: 294 LEQFNELIQIPHGMILVVGPTGSGKTTTLYSVIAQLNDHR-KKIITVEDPVEYKMAGLCQ 352 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IG+ TFASGLR+ +R+DPD+IL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 353 MQVNSKIGV---TFASGLRSIVRQDPDIILVGEIRDRETADIAINAALTGHLVLSTLHTN 409 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK------------------- 269 A AV RL+D +A +L VLSQ+L Sbjct: 410 DAVGAVTRLIDMGMES------FLVASALYGVLSQRLVRKTCTACRGTGSDASGGKCRRC 463 Query: 270 ----QEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 +GR +FELL + + + + + GM+T ++ +V G Sbjct: 464 NGTGYKGRCGIFELLRMNDDIRQAVNKNVPS--SELERLAIANGMVTLREDGIAKVRAG 520 >UniRef50_Q0EY30 Type IV pilus biogenesis protein PilB n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY30_9PROT Length = 732 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 96/376 (25%), Positives = 169/376 (44%), Gaps = 66/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAI 59 + ++ ++K SD+H+ R R+ GR+ L+ + + Sbjct: 188 VNGVIVQAMKIGSSDIHIEPGDKQSVVRLRVDGRLRPMIRFPSKAHPLVVSRIKIMSKLD 247 Query: 60 L-----LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 + ++G+ + L ++ +R S HG + +R+L L+ L Sbjct: 248 ISNTRTPQDGRARVKM-LGKSYDMRISTLPAMHGEKVVMRILDQGGLALNLDVLCFEETA 306 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + ++ G +LVTG TGSGK+TTL + + ++ Q+ + +++T+EDPVE+ A Sbjct: 307 YKHIRQCIEQPTGAVLVTGPTGSGKTTTLYSFLHHI-QNEEMNLITIEDPVEFQIAGINQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + G MTFA+ LR+ LR+DPDV+++GE+RD ET +AL AA+TGHLVL+TLHT Sbjct: 366 VQVNPKAG---MTFAAVLRSILRQDPDVVMVGEIRDEETAEIALHAAQTGHLVLSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RL+D + LA SL +++Q+L Sbjct: 423 DAPSTVTRLLDMGIE------PSMLASSLNLIVAQRLVRRLCPQCRVESKPTDELIERLG 476 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR+ + E+L + + LI G T + ++Q + Sbjct: 477 IPEGVRFYDKAGCKHCMNIGYKGRMGVHEVLYVSDRIRKLIARGATDR--ELMQAARDED 534 Query: 310 MITFQQSYQHRVGEGR 325 M+T + + G+ Sbjct: 535 MLTLFEDGMSKALAGQ 550 >UniRef50_A3ZX01 General secretion pathway protein E n=3 Tax=Planctomycetaceae RepID=A3ZX01_9PLAN Length = 575 Score = 313 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 106/383 (27%), Positives = 166/383 (43%), Gaps = 75/383 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPD--VEELLREWLDDDQR 57 + EI+ +++ SD+H+ S R+RI G + + P + + L R Sbjct: 185 VNEIMFEAIESRASDVHIESQGSGLVVRYRIDGMLHSQPVPPEINYFQAAIISRLKIMSR 244 Query: 58 -----AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPT 110 L ++G++ V +R S HG S+ +R+L + LG Sbjct: 245 LNIAEKRLPQDGRIKLKVR-GREIDIRVSMIPMIHGESIVMRILDKGSLTFDLRTLGMDE 303 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 ++ +G++LVTG TGSGK+TTL + + + Q I+T EDPVEY Sbjct: 304 DVYQQFKSIISLPHGIVLVTGPTGSGKTTTLYSSLLEI-QDESTKIITTEDPVEYQLDGI 362 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + +IGL TFA+ LR+ LR DPDV+L+GE+RD ET A+ A+ TGHLV +TLH Sbjct: 363 NQIQVHPKIGL---TFAASLRSILRHDPDVVLVGEIRDKETAENAVQASLTGHLVFSTLH 419 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T AA A R++D +A ++ V++Q+L Sbjct: 420 TNDAAGAFARMIDMGVE------PFLIASTIEGVMAQRLVRKLCPHCKVAYEPKRAELPA 473 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREG-KTHQLPHV 301 GR+ ++ELLI T + L EG TH++ Sbjct: 474 DFPWDDFIAAGGKLHQPTGCRQCRGVGYRGRMGIYELLITTEEIRELAHEGLSTHKIK-- 531 Query: 302 IQTGQQVGMITFQQSYQHRVGEG 324 Q ++ GM+T +Q + G Sbjct: 532 -QIAKKNGMLTLRQYGWRKALSG 553 >UniRef50_C7R600 Type II secretion system protein E n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R600_KANKD Length = 659 Score = 313 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 101/377 (26%), Positives = 162/377 (42%), Gaps = 66/377 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 M I+ +++ SD+HL +R+ G + + + L + D Sbjct: 275 MASIITDAIEKGASDIHLHPRAKYLQLLYRMDGSLTPIRKLNLSLHQALVSRIKIIGGMD 334 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 L ++G++++A ++ +R S +G S+ +R+L S + +LG Sbjct: 335 ISERRLPQDGRIEYA-GNGKSIDMRISVMPTVYGESVVIRILDSSQGLRDINELGLTEKD 393 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LL S G+ LVTG TGSGKSTTL A + + HI+T+E+PVEY Sbjct: 394 TERFVNLLHSSYGMFLVTGPTGSGKSTTLYAAINEKVKEGP-HIITVEEPVEYKMEGVTQ 452 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + G +FA LR LR DPDVI++GE+RD ET ++A+ ++ TGHLVL+TLHT Sbjct: 453 IPVNHKTG---YSFARALRNILRHDPDVIMVGEIRDGETAKIAVESSLTGHLVLSTLHTN 509 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE----------------- 271 A + RLV+ L +L +L+Q+L + Sbjct: 510 SAVSTITRLVEMGVE------PYLLKDALVGILAQRLVKKNCKHCLVEEKIPGSILKEIQ 563 Query: 272 ----------------------GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR +++ELL TP V I +T + + Q Q G Sbjct: 564 AAKNDKFYKGAGCAECFNTGIAGRRSVYELLSITPEVAREI--NETLDINKLNQIAQNQG 621 Query: 310 MITFQQSYQHRVGEGRL 326 M++ Q + + Sbjct: 622 MVSLAQMALELARKKEI 638 >UniRef50_B6ELG1 Type IV pilus assembly protein PilB n=13 Tax=Gammaproteobacteria RepID=B6ELG1_ALISL Length = 563 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 104/377 (27%), Positives = 166/377 (44%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD--------- 53 + +I+ +V+ VSD+H + +R+R R + + L L Sbjct: 187 INQILLEAVRKGVSDIHF-EPYEETYRVRFRCDGILVENSSPSSHLSRHLSARLKIMAKL 245 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV 111 D L ++G++ ++ + +R S+ G + LRLL S L+ +LG Sbjct: 246 DIAERRLPQDGRIKLKLNSEVSIDMRVSSLPTLWGEKIVLRLLDSSAASLDIDKLGYSDA 305 Query: 112 LPEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 EL LK G+IL+TG TGSGK+ +L + + LN + +I T EDPVE Sbjct: 306 QKELYLTALKRPQGMILMTGPTGSGKTVSLYSGLNILNTT-EKNISTAEDPVEINLNGIN 364 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + +IG TFA LR+ LR+DPD++++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 365 QVQVNPKIGF---TFAYALRSFLRQDPDIVMVGEIRDLETAEIAVKAAQTGHLVLSTLHT 421 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 AA+ V RL + LA SL +++Q+L Sbjct: 422 NSAAETVVRLGNMGIEN------FNLASSLTLIIAQRLARRLCPHCKAIDPLTPEIREEY 475 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ ++E++ T + I +G T + + Q + Sbjct: 476 GIDLLGTVFQAHTEGCNECTHGYSGRIGIYEVMPFTRELSIAILKGAT--VRQIEQLAIK 533 Query: 308 VGMITFQQSYQHRVGEG 324 GM S R+ +G Sbjct: 534 QGMDNLATSGIKRLEDG 550 >UniRef50_B4ST75 Type IV-A pilus assembly ATPase PilB n=56 Tax=Proteobacteria RepID=B4ST75_STRM5 Length = 577 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 92/379 (24%), Positives = 164/379 (43%), Gaps = 69/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +++ SD+H + R RI G ++ + + + L D Sbjct: 198 VNKVLVDAIRKGASDIHFEPYEDDYRVRLRIDGLLKMVARAPVKLNQRIAARLKVMAQLD 257 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ +S ++ R S G + LR+L +L ++LG Sbjct: 258 IAEKRVPQDGRIKLNLSKSKQIDFRVSTLPTLFGEKVVLRILDGSAAKLGIDKLGYEPDQ 317 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + G++LVTG TGSGK+ +L +G LN +I T EDPVE Sbjct: 318 QKLFQDAIHKPYGMVLVTGPTGSGKTVSLYTALGILNDET-RNISTAEDPVEIRLPGVNQ 376 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q + G MTFA+ LR+ LR+DPD+I++GE+RD ET +A+ AA+TGH+VL+TLHT Sbjct: 377 VQQNNKRG---MTFAAALRSFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTN 433 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A Q + RL++ A + S+ V++Q+L Sbjct: 434 DAPQTIARLMNMGIA------PYNITSSVTLVIAQRLARRLCGNCKRRSTLPEHALLAEG 487 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR +++++ T + ++ G + + Sbjct: 488 FTQAQLDAGIELYEAVGCDECTEGYKGRTGIYQVMPMTDEIATIVLAGGNAL--QIAEAA 545 Query: 306 QQVGMITFQQSYQHRVGEG 324 QQ+G+ +QS + G Sbjct: 546 QQIGVNDLRQSALKKAAAG 564 >UniRef50_Q1IRV6 Type II secretion system protein E n=24 Tax=Bacteria RepID=Q1IRV6_ACIBL Length = 571 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 170/382 (44%), Gaps = 72/382 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +VK SD+H+ + R+RI G ++ + + + + D Sbjct: 189 VNMILTEAVKKGASDIHMEPYEKEYRVRFRIDGILQTMMNPPMKLRDAIISRVKIMAKLD 248 Query: 55 DQRAILLENGQLDFAVSL---AENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP 109 L ++G++ ++L + R S G + LRLL +L+ +LG Sbjct: 249 ISEKRLPQDGRIMLKMNLQGKKKVLDYRVSTLPTLWGEKVVLRLLDKESLRLDMTKLGME 308 Query: 110 TV----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 + + G++LVTG TGSGK+ TL + + LN+ D +I+T EDPVE+ Sbjct: 309 QESLDKFTKAIFKPYGMVLVTGPTGSGKTNTLYSSISQLNK-PDTNIMTAEDPVEFQLHG 367 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 + + +IGL+ FA+ LR+ LR+DP++IL+GE+RD ET +A+ AA TGHLVL+TL Sbjct: 368 VNQVQMKEQIGLN---FAAALRSFLRQDPNIILVGEIRDFETAEIAIKAALTGHLVLSTL 424 Query: 226 HTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------- 268 HT GA + + RL++ +A S+ + +Q+L Sbjct: 425 HTNGAPETISRLMNMGIE------PFLVATSVHLIAAQRLIRRICSNCAEVLDLPPQALI 478 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR L+E++ + LI G + + Sbjct: 479 EAGYSPAESKTVKISKGRGCSNCNNTGYKGRTGLYEVMEIDDEIRELILVGASAL--ELK 536 Query: 303 QTGQQVGMITFQQSYQHRVGEG 324 + + GMIT ++S +V G Sbjct: 537 KKAIEKGMITLRRSGLIKVSLG 558 >UniRef50_Q0AZI9 Type II secretion system protein E n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZI9_SYNWW Length = 417 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 111/380 (29%), Positives = 171/380 (45%), Gaps = 67/380 (17%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD---- 53 + + I+ +V+ SD+H+ R+R+ G + A + + + Sbjct: 35 LLVNSILTQAVEEGCSDIHIEPEQQDIRLRFRLDGELYEAARLPLSLLSPIVSRIKIMAG 94 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPT 110 D L ++G+ + R S G LALR+L + ++ QLG + Sbjct: 95 MDISEKRLPQDGRFRATIE-EREVDFRTSTLPTAWGEKLALRILDRANALTEIRQLGFSS 153 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 L L G++LVTG +GSGK+TTL +++ +N + +I+TLEDPVEY Sbjct: 154 NNQANLLALSHCSQGMVLVTGPSGSGKTTTLYSILTQINS-IEKNIITLEDPVEYTLPGV 212 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + GL TFASGLRA LR+DPDVI++GE+RD ET RLA+ AA TGHLV +TLH Sbjct: 213 NQVQINPKAGL---TFASGLRAILRQDPDVIMVGEIRDRETARLAVQAALTGHLVFSTLH 269 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------- 267 T AA ++ RL D LA SL V+SQ+L Sbjct: 270 TNSAAGSITRLRDMGIED------FLLASSLAGVVSQRLVRKLCCYCRQEYTIEEQLAKK 323 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+AL E+++ + +L+ G++ + + +T Sbjct: 324 LGLPLDIGRVFFRSKGCRACRNTGYRGRIALQEIMLLGSEIRDLLNRGESSE-DRLQKTA 382 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GMI+ + EGR Sbjct: 383 IKNGMISIMLDAITKAREGR 402 >UniRef50_A7BSG5 Bacterial type II secretion system protein E n=1 Tax=Beggiatoa sp. PS RepID=A7BSG5_9GAMM Length = 512 Score = 312 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 103/382 (26%), Positives = 166/382 (43%), Gaps = 73/382 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + +V SD+H+ R+R+ G + + + + D Sbjct: 127 VNNMFSQAVDQRASDVHIEPEEHTFFVRYRVDGVLYEHLSLPRERFNAIASRIKLISGMD 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTV- 111 L ++G+L+ VS ++ +R S HG S+ +RLLP L QLG Sbjct: 187 IAERRLPQDGRLNTRVS-GQDLDIRVSCLPGVHGESIVMRLLPKERQTSRLGQLGMAPDH 245 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + +G+ILVTG TGSGKSTTL A + +N + I+T+EDPVEY Sbjct: 246 HNQFSQWISEPHGIILVTGPTGSGKSTTLYAALDAVN-NRTQKIITVEDPVEYQLNGITQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IG TFA LR+ LR+DPD++++GE+RD ET +A+ AA TGH+VL+TLHT Sbjct: 305 VQAHSDIG---YTFAHALRSILRQDPDIVMIGEVRDRETSEIAIQAALTGHMVLSTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A RL++ +A S+RAV +Q+L Sbjct: 362 DAVSAFTRLIEMGIE------PFLVATSVRAVQAQRLVRRLCPTCAEPTSVLAEIEAQTQ 415 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR+ ++E++ TP + LI + + Sbjct: 416 RILPTEIAEQPAQWKQPTGCPTCQGMGYQGRIGIYEMVYITPEMQTLILNRASA--TEMR 473 Query: 303 QTGQQVGMITFQQSYQHRVGEG 324 Q + G T ++ + +G Sbjct: 474 QLAVKQGFRTLREDGFIKSYQG 495 >UniRef50_D2QZA7 Type II secretion system protein E n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZA7_9PLAN Length = 596 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 106/377 (28%), Positives = 164/377 (43%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ +VK SD+H+ A R+RI G++ + ++ + + D Sbjct: 192 VNYVIYHAVKEGASDIHIEPAERCVRVRYRIDGKLYKSLEVPLNLLGAVTSRIKIMASLD 251 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G++ + LR S F G +R+L + L LG Sbjct: 252 ISERRLPQDGRVHVMLD-GRKVDLRVSTFPGNRGEKTVIRVLDTRSVSLNLRDLGFAEDI 310 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + + + NG++LVTG TGSGKSTTL A + + + +I T+EDP+EY Sbjct: 311 LTPLQQSINAPNGIVLVTGPTGSGKSTTLYAALNEIASMEN-NICTVEDPIEYHLPLINQ 369 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 Q +GL TF+ LR LR+DPDVI++GE+RD ET R A+ AA TGHLV +TLHT Sbjct: 370 FQVQERVGL---TFSKALRTLLRQDPDVIMVGEVRDDETARTAIQAALTGHLVFSTLHTN 426 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA A+ RL++ + +L AVL+Q+L Sbjct: 427 DAASAITRLINMGVE------PYLIGAALNAVLAQRLVRRICGKCREAYDPPRTLRKAIE 480 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GRV + ELLI + + I GK+ + + + Sbjct: 481 KMGYPMEKFFKGAGCRKCRNTGYSGRVGVHELLIVNDELRDAIVAGKS--VAELRRIAAA 538 Query: 308 VGMITFQQSYQHRVGEG 324 M+T + +V EG Sbjct: 539 YNMVTLRHDGFRKVREG 555 >UniRef50_D2QZD9 Type II secretion system protein E n=4 Tax=Planctomycetaceae RepID=D2QZD9_9PLAN Length = 573 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 167/380 (43%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTP--DVEELLREWLDDDQR 57 + EI+ +++ SD+H+ S R+R+ G +++ P E + L R Sbjct: 185 VNEILLEAIELRASDVHIESQPSGLAIRYRVDGMLQSQPIPPEIHRFEAAIVSRLKIMSR 244 Query: 58 -----AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPT 110 L ++G++ V +R S HG L +R+L S L+++G Sbjct: 245 LNIAEKRLPQDGRMKLKVK-GREIDVRVSVIPMIHGEGLVMRILDKGSMVFDLQKIGMEP 303 Query: 111 ----VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 V EL+ +G++LVTG TGSGK+TTL + + +N D I+T EDPVEY Sbjct: 304 DTYKVYRELIDLPHGIVLVTGPTGSGKTTTLYSSLIEINT-PDVKIITTEDPVEYQLEGI 362 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + +IGL TFA+ LR+ LR DPDV+L+GE+RD ET A+ A+ TGH+V +TLH Sbjct: 363 NQIQVHHKIGL---TFAASLRSILRHDPDVVLVGEIRDLETAENAIQASLTGHMVFSTLH 419 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T AA A RL D +A ++ AV++Q+L Sbjct: 420 TNDAASAYTRLTDMGVE------PFLVASTVEAVMAQRLVRRLCKHCKQPYDAVRDDVPS 473 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR+ ++ELL+ T + L ++Q Sbjct: 474 DFPWEDLQSRPLFKGVGCRECRNTGYRGRMGIYELLVTTNEIRQL--ACDRASSWKIMQA 531 Query: 305 GQQVGMITFQQSYQHRVGEG 324 + GM + +Q +V G Sbjct: 532 ASKEGMRSLRQDGWKKVLVG 551 >UniRef50_A6M148 Type II secretion system protein E n=18 Tax=Clostridiaceae RepID=A6M148_CLOB8 Length = 564 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 173/380 (45%), Gaps = 72/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAP------FDTPDVEELLREWLD 53 ++ + SV+ SD+H+ R+RI G+++ + L+ Sbjct: 184 VDYLFRNSVEMKTSDIHIEPFENEIRIRYRIDGKLQTVNTLGIESLGPLVTRIKILAGLN 243 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV 111 ++ I ++G++ F V A+ LR S +G + +R+L ++ +QLG Sbjct: 244 IAEKRI-PQDGRIMFEVDGAQ-VDLRVSILPVVNGEKIVIRILNTNGSILSKKQLGMSEE 301 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 L ++ + +G+ILVTG TGSGKSTTL +++ LN ++ +I+T+EDPVEY Sbjct: 302 NIHRLNRIIGNPHGIILVTGPTGSGKSTTLYSILNELNSNS-VNIITVEDPVEYTMNGIN 360 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFASGLR+ LR+DPD+I++GE+RD ET +A AA TGHLVL+TLHT Sbjct: 361 QVSVNEKAGL---TFASGLRSILRQDPDIIMIGEVRDEETAEIATRAAITGHLVLSTLHT 417 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A ++ RL+D ++ S+ V++Q+L Sbjct: 418 NDAPSSIIRLIDMGIK------PYLVSTSVVGVIAQRLVRKICNNCKEAYEASEYEKEVL 471 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREG-KTHQLPHVIQTG 305 GRV ++E++ T I G T L + Sbjct: 472 EKNINEPLTIYRGAGCGYCNNTGYSGRVGIYEIMEVTRDHREAISSGANTDDLRDI---S 528 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM T + + V GR Sbjct: 529 VRKGMKTLESECKDLVIGGR 548 >UniRef50_A6C2Q8 Type II secretion system protein E n=3 Tax=Planctomycetaceae RepID=A6C2Q8_9PLAN Length = 582 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 103/377 (27%), Positives = 160/377 (42%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +V+ SD+H+ R+R+ G ++ A + + + D Sbjct: 195 VNYIIYNAVREGASDIHIEPTEQQLRVRYRVDGVLQQALEPPVHLAPAVSSRIKIMASLD 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 L ++G++ + LR S G + +R+L + LEQLG + Sbjct: 255 ISERRLPQDGRIHVLME-GRPIDLRVSTLPMPTGEKVVIRILDNRSVNISLEQLGFSSEV 313 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L NG+ILVTG TGSGKSTTL A + + + ++ T+EDP+EY Sbjct: 314 LEHFTEQLDKPNGIILVTGPTGSGKSTTLYAALNAV-SSIEKNVCTVEDPIEYQLPMINQ 372 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 +IGL +FAS LR+ LR+DPDVI++GE+RD ET ++A+ AA TGHLV +TLHT Sbjct: 373 FQVNEKIGL---SFASILRSLLRQDPDVIMVGEIRDQETGKIAIQAALTGHLVFSTLHTN 429 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL++ + +L L+Q+L Sbjct: 430 DAISAVTRLINMGVDD------YLIGAALNMALAQRLCRKLCPKCKTPYELPKAMQLAVE 483 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ + E+L + +I T + V + Q Sbjct: 484 RIGLDVEEFYRGKGCKRCRNTGFSGRIGVHEILTIDDPLREIITTNPT--VAAVKEYAQN 541 Query: 308 VGMITFQQSYQHRVGEG 324 GMI + + EG Sbjct: 542 NGMIPLRYDALRKAKEG 558 >UniRef50_B2ULL9 Type II secretion system protein E n=2 Tax=Verrucomicrobiaceae RepID=B2ULL9_AKKM8 Length = 546 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 176/380 (46%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD------ 53 +++++ + K SD+H+ R+R+ G++ + + L Sbjct: 164 VQQMLTDAFKMRASDIHIEPMENRLRIRYRVDGKLVEVATHPKKLLSPIIARLKVMSTTM 223 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA--- 108 + ++G++ ++ + LR S+ HG S+ +R+L L QLG Sbjct: 224 SIAEKRMPQDGRIQMSIG-GKQIDLRVSSVPSNHGESIVMRILDKSALVLGLPQLGFFSD 282 Query: 109 -PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 V L+ +G+ILVTG TGSGK+TTL A + ++N+ D I+T+EDPVEY + Sbjct: 283 DEAVFDRLITLPDGIILVTGPTGSGKTTTLYACLNHINR-PDKKIITVEDPVEYELSGIN 341 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 ++ + +IG MTFA+ LRA LR+ P++I++GE+RD ET +A+ A+ TGHLV +TLHT Sbjct: 342 QVMVKADIG---MTFAAALRAMLRQAPNIIMIGEIRDMETASIAINASLTGHLVFSTLHT 398 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A AV RL D R +A S+RA+++Q+L Sbjct: 399 NDAPSAVARLADIGIK------RFLIASSVRAIMAQRLVRKLCDRCKVDGTLTEKQAHTL 452 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GR+ LFE+ V +I E T P + Q Sbjct: 453 NIDMSRLAQGQIKAPHGCDFCRGGGFKGRMGLFEIFEIDDEVRRMINENLTS--PQLRQR 510 Query: 305 GQQVGMITFQQSYQHRVGEG 324 +++GM T ++ +V G Sbjct: 511 ARELGMRTLREDGVRKVLAG 530 >UniRef50_UPI0001746A79 hypothetical protein VspiD_01995 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746A79 Length = 357 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 129/324 (39%), Positives = 185/324 (57%), Gaps = 16/324 (4%) Query: 4 EEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLEN 63 + I+ +S +SD ++ P +R+ G++ +D E + AI + Sbjct: 15 QRILQISQNSGISDFYITPWEPLVYRLNGKLY---YDVYTYEPTV---------AIEAKP 62 Query: 64 GQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT-VLPELLKSENGL 122 G D+AVS+ +R R + + R LRLLP + P LE + P + L+++NGL Sbjct: 63 GTQDYAVSMGG-RRYRVNRLSTRGRSRWVLRLLPENIPTLENIYLPPPAIKSFLEAKNGL 121 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA-SQRCLIQQREIGLHCMT 181 LV GATGSGKSTT+AA+V + H++T EDP+EYLY LI QREIG + Sbjct: 122 FLVCGATGSGKSTTIAALVLERAKRRQEHVITFEDPIEYLYPQGLPSLISQREIGSDELD 181 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 F + LRAALR+ PDVI++GE+RD ET +AL AAETGHLV+ATLHT AAQ V+R + Sbjct: 182 FGTSLRAALRQAPDVIVVGEIRDGETAEIALQAAETGHLVVATLHTSSAAQTVQRYLKLI 241 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQLPH 300 ++ + A S R +L Q+L D Q+ R A+ ELL+ +V +IR G+ +L H Sbjct: 242 SSERLENAMLSFADSFRGILCQRLLADDQKQRRFAIHELLLPYDSVCGVIRRGEFKKLDH 301 Query: 301 VIQTGQQVGMITFQQSYQHRVGEG 324 ++ G GMI+F +S Q R EG Sbjct: 302 ELEAGMTRGMISFDRSLQQREYEG 325 >UniRef50_A3CR73 PilB-like pili biogenesis ATPase, putative n=2 Tax=Firmicutes RepID=A3CR73_STRSV Length = 560 Score = 311 bits (797), Expect = 2e-83, Method: Composition-based stats. Identities = 99/376 (26%), Positives = 168/376 (44%), Gaps = 68/376 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ I++ ++K SD+H+ R+R+ G + + + + D Sbjct: 181 IDSIISQAIKTRTSDIHIEPFEKVVRVRFRVDGTLVENMQLKANAHSAIATRIKIMSGLD 240 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPT-- 110 + ++G+++ + + +R S G + +R+L + L E+LG Sbjct: 241 IAERRIPQDGRIETTID-GKEVDMRVSVLPTVFGEKIVIRILSRNATLLSKEELGFSPTN 299 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++LK+ G+IL+TG TGSGK+TTL + LN +I+T+EDPVEY Sbjct: 300 QKLFEDILKAPEGIILLTGPTGSGKTTTLYTALRELN-DVGKNIITVEDPVEYRLEGVNQ 358 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFASGLR+ LR+DPD++LLGE+RD ET +A+ AA TGH+VL+T+HT Sbjct: 359 VQVNNKAGL---TFASGLRSILRQDPDIVLLGEIRDEETASIAVRAAITGHVVLSTIHTN 415 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RLVD ++ + +++Q+L Sbjct: 416 DTASTVNRLVDMGIK------PYLVSTATVGIIAQRLIKRICPKCKTEYTVETNEHAGIG 469 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIRE-GKTHQLPHVIQTGQQV 308 GR+A+ E++ T + +LI + G T QL ++ Sbjct: 470 IHKGDTLYRGRGCNYCSGTGYYGRIAIHEIMAVTREIKSLINDGGTTSQLR---AEAKKN 526 Query: 309 GMITFQQSYQHRVGEG 324 GM + +G Sbjct: 527 GMRDLAEEAIDIAKQG 542 >UniRef50_B9JMG1 Pilus assembly secretion ATP-binding protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMG1_AGRRK Length = 538 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 106/357 (29%), Positives = 165/357 (46%), Gaps = 49/357 (13%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + I+ +V +D+H+ + R R G ++ + + R Sbjct: 180 VSRILQRAVDEKATDIHIEPLEDSIRIRLRRDGLLDTLEIVPKFNAAAVTSRIKILSRLN 239 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G+L ++ + R S HG ++ LR+L +L+ LG Sbjct: 240 ISERRLPQDGRLRASIR-GQEVDFRVSVMPSIHGETIVLRILDRSNIRLDLAALGYQPES 298 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +++ NG++L+TG TGSGK+TTL +++ +N A + I T+EDPVEY A Sbjct: 299 MATIARIVRRPNGIMLLTGPTGSGKTTTLYSILSDIN-DAKSKIFTVEDPVEYRLAGVTQ 357 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 L + IGL TFA+ LR+ LR+DPD+ILLGE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 358 LQVEPSIGL---TFATALRSVLRQDPDIILLGEIRDPETARIAVQAALTGHLVLSTLHTN 414 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK------------------- 269 AA A+ RL + LA +LR ++ Q+L Sbjct: 415 SAAGAINRLREMGVES------YLLAATLRGIIGQRLLRKACPDCSSHPAGIRCETCNGA 468 Query: 270 -QEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT-GQQVGMITFQQSYQHRVGEG 324 GR A++E+L T + I + I+ + GM Q + V G Sbjct: 469 GYSGRRAVYEILEVTEPIREAIGRD---LIQSEIENLAIKEGMRPLAQQARELVAAG 522 >UniRef50_P37093 General secretion pathway protein E n=178 Tax=Proteobacteria RepID=GSPE_VIBCH Length = 503 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 102/377 (27%), Positives = 163/377 (43%), Gaps = 69/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ ++K SD+H+ + R+R+ G + + + LL + D Sbjct: 127 INAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLD 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 + ++G++ + +R S HG + +RLL + +L+ LG Sbjct: 187 IAEKRVPQDGRISLRIG-GRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHN 245 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+K +G+ILVTG TGSGKSTTL A + LN + +ILT+EDP+E+ Sbjct: 246 HDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSS-ERNILTVEDPIEFDIDGIGQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + MTFA GLRA LR+DPDV+++GE+RD ET ++A+ A+ TGHLV++TLHT Sbjct: 305 TQVNPRVD---MTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL D ++ SL VL+Q+L Sbjct: 362 TAVGAVTRLRDMGIE------PFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFD 415 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR + ELL+ A+ LI Q ++ + Sbjct: 416 SKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQ---AMEKHIR 472 Query: 308 VGMITFQQSYQHRVGEG 324 + + +V +G Sbjct: 473 ATTPSIRDDGLDKVRQG 489 >UniRef50_A8UTG3 Type IV pilus assembly protein TapB n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTG3_9AQUI Length = 565 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 101/381 (26%), Positives = 159/381 (41%), Gaps = 73/381 (19%) Query: 4 EEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 ++ +V+ SD+H+ R+R+ G ++ ++++ L D Sbjct: 185 NGLIFEAVRMGASDIHIEPFEKKVLVRYRVDGVLKIYHQLPINIKDSLVARYKILSNLDI 244 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC---PQLEQLGAPTV- 111 ++G++ + + LR S +G + +R+ + +LE LG Sbjct: 245 AEKRKPQDGRIRIKID-RKKIDLRVSTVPTVYGEKVVMRIQEAEKYLNVKLEDLGFEPDD 303 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + G+ILVTG TGSGK+TTL + + N+ D +I+T EDPVE Sbjct: 304 LEKFRGAIWKPWGMILVTGPTGSGKTTTLYSALMERNE-PDVNIMTAEDPVEVAIPGINQ 362 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL TF+S LRA LR+DPD+IL+GE+RD ET +A+ A+ TGHLV +TLHT Sbjct: 363 VQVNERIGL---TFSSVLRAFLRQDPDIILVGEIRDQETGDIAVRASLTGHLVFSTLHTN 419 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RL D + SL V++Q+L Sbjct: 420 DAPTTVTRLTDMGIE------PFLVGSSLVLVVAQRLIRRLCPDCKVPHDVPKEALVRMG 473 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR+A+ E++ + LI +G T + Sbjct: 474 VLKSPDEDAVIYKASEKGCPTCNNTGYKGRMAVHEIMEIDDELRKLIIKGGTAD--DIRD 531 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 Q GM T QS +V +G Sbjct: 532 LALQKGMRTLYQSGMLKVKKG 552 >UniRef50_Q3J755 Type II secretion system protein E n=11 Tax=Gammaproteobacteria RepID=Q3J755_NITOC Length = 580 Score = 310 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 158/380 (41%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + ++ +V+ SD+H+ + R+RI G + + + Sbjct: 200 VNLLIQRAVESRASDIHIEPFENSLRVRYRIDGVLRDVEAPPARSTAAVISRFKIMAKLN 259 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++G++ + LR S +G S+ LRLL + LG Sbjct: 260 IAERRLPQDGRIQLRIQ-GRELDLRVSTVPTLYGESVVLRLLDKGNVVLDFDSLGFQGST 318 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+ +G+I+VTG TGSGKSTTL + LN D I+T+EDPVEY Sbjct: 319 LERFLHVLEQPHGIIVVTGPTGSGKSTTLYTALHKLNT-PDRKIVTVEDPVEYQLEGINQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TFA LR+ +R+DPDVI++GE+RD ET +A+ +A TGH+VL+TLHT Sbjct: 378 IQVKPQIGL---TFAGALRSIVRQDPDVIMIGEMRDKETAGIAVQSALTGHVVLSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA V RL+D L ++ +L+Q+L Sbjct: 435 DAAGGVTRLLDMGIED------YLLTSTVNGILAQRLVRTLCKHCSEPYEALPELIEELE 488 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR A+ E L+ + + L+ + + + Sbjct: 489 LHRFSQEKPVMLHRAVGCEQCNGIGYHGRAAIMEFLVMSDPIRRLVLQHTDAG--EIQKQ 546 Query: 305 GQQVGMITFQQSYQHRVGEG 324 Q+ GM + H+ G Sbjct: 547 AQKEGMRIMYEDGLHKALSG 566 >UniRef50_A5D376 Type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D376_PELTS Length = 462 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 170/379 (44%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++A ++ SD+H+ R+RI G + ++ L + D Sbjct: 81 VNDLIAQAISARASDIHIEPQEDRVQVRFRIDGMLREVAALPWSLKFPLAARVKIMANLD 140 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTV- 111 L ++G++ + + LR S A G + +R+ + ++QLG Sbjct: 141 IVEKRLPQDGRIKIRFA-GRDIDLRVSTMATMFGEKVVIRIHDKSVQKHKIDQLGFSAED 199 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+K+ +G+IL+TG TGSGK+TTL A + L + +I+T+EDPVEY+ Sbjct: 200 LCRYRQLIKNSHGMILITGPTGSGKTTTLYATISELCSQ-EKNIVTIEDPVEYVLKGVNQ 258 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 G+ TFA GLRA LR+DPDV+++GE+RD ET +A+ AA TG LVL+T+HT Sbjct: 259 TQVNPGAGI---TFAIGLRAILRQDPDVVMVGEIRDQETASIAVRAATTGQLVLSTMHTI 315 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL+D ++ S+ ++SQ+L Sbjct: 316 DAPGALTRLIDMGVE------PFLISSSVLCIVSQRLVRLCCEFCREAYEPAGDSPERML 369 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR +FE+L T + L+R+ + + +T Sbjct: 370 LDAENGGAVCLYRSRGCEHCGYTGFKGRTGIFEILPLTAEIRRLVRKKASSD--EIRKTA 427 Query: 306 QQVGMITFQQSYQHRVGEG 324 + GMITF++ + G Sbjct: 428 TEQGMITFREDGIKKAMVG 446 >UniRef50_D2L7F7 Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L7F7_9DELT Length = 402 Score = 310 bits (794), Expect = 5e-83, Method: Composition-based stats. Identities = 128/323 (39%), Positives = 162/323 (50%), Gaps = 12/323 (3%) Query: 16 SDLHLCSAWPARWRIRGRMEAAP--------FDTPDVEELLREWLDDDQR--AILLENGQ 65 SD S P + G P E L R L D R A L G Sbjct: 21 SDYLFASGSPPGALVDGAFVPLPALPGVAGALTPRQTETLARGLLGRDARLLADLRIRGS 80 Query: 66 LDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILV 125 D A + R R +A+ + L LR LP P L LG P V + GL+LV Sbjct: 81 CDAAYAHPAGVRFRANAYRAGDSLGLVLRRLPDAPPPLASLGLPPVFTRMATLAEGLVLV 140 Query: 126 TGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASG 185 GATGSGKSTTL+A+ + H++TLEDPVE L+ R ++ QRE+G +FA G Sbjct: 141 VGATGSGKSTTLSALATAILADRPVHVVTLEDPVESLFPPGRGVVSQRELGTDFPSFADG 200 Query: 186 LRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQE 245 +RAALR+ P VIL+GE RD ET+ AL AAETGHLVLATLHT A AVERL+ F E Sbjct: 201 IRAALRQAPHVILVGEARDRETVDAALGAAETGHLVLATLHTADCAGAVERLLAFFGPSE 260 Query: 246 KDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK--THQLPHVIQ 303 + R +LAGSLR V +Q+L GR E+L T I GK + +++ Sbjct: 261 ERLARQRLAGSLRFVAAQRLLPRVGGGRAVSVEVLAATLRTRERILAGKDGSEGFSDILE 320 Query: 304 TGQQVGMITFQQSYQHRVGEGRL 326 G+ GM+TF S G + Sbjct: 321 QGEPYGMVTFDASTAALFAAGTI 343 >UniRef50_A8ZYV7 Type II secretion system protein E n=11 Tax=Deltaproteobacteria RepID=A8ZYV7_DESOH Length = 577 Score = 309 bits (793), Expect = 7e-83, Method: Composition-based stats. Identities = 104/378 (27%), Positives = 164/378 (43%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A +V+ SD+H+ R R+ G + P + + L D Sbjct: 200 VNALLAQAVRQGASDIHISPEKRYVQVRLRVDGVLHEVPAPPKTLFLSIVSRLKILANLD 259 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA---- 108 + + ++G+ + E +R S +G ++ LRLL + L+QLG Sbjct: 260 ISVSRIPQDGRFTVKIENKE-INIRVSTIPTIYGENVVLRLLDTSGGVYTLDQLGMASED 318 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L ++ G+IL TG TGSGKST+L AM+ +N+ D +I+TLEDPVEY R Sbjct: 319 QEKLKRNIQKPYGMILATGPTGSGKSTSLFAMINRINK-PDINIITLEDPVEYRIEKIRQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 R G MTFASGLR+ LR+DPDVI++GE+RD ET ++A AA TGH+V +T+HT Sbjct: 378 AQLNRRAG---MTFASGLRSILRQDPDVIMVGEIRDGETAQVATQAALTGHMVFSTVHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A+ R +D ++ + ++Q+L Sbjct: 435 DAAGAITRFIDMGVE------PFLVSSVMLVSMAQRLVRKVCEDCAEPYQPPHEALVFMG 488 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLI-REGKTHQLPHVIQTGQ 306 GR ++E+L V +I +HQ+ T Sbjct: 489 LENAKKATFKRGKGCAYCMNTGYRGRTGIYEILEIDDDVREMIVSRATSHQITRAAVTAG 548 Query: 307 QVGMITFQQSYQHRVGEG 324 ++ T +Q + G Sbjct: 549 KL--QTLKQDAARKAALG 564 >UniRef50_Q2RY72 Type II secretion system protein E n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RY72_RHORT Length = 348 Score = 309 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 131/337 (38%), Positives = 192/337 (56%), Gaps = 13/337 (3%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRM-----EAAPFDTPDVEELLREWLDDD 55 M++ ++ L+ + + SDLHL RI GR+ + A D + L+ + LD Sbjct: 1 MDLTSLLRLAHQRSASDLHLAVGMAPSLRIDGRLSEMTPQGALIDRSAIMGLIAQALDQP 60 Query: 56 QRAILLENGQLDFAVSLA----ENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTV 111 R L G+ + +SL R+R +A G +L LRLL P E LG P Sbjct: 61 ARERLERLGEAEAMLSLPMAADPPLRVRVTACRALAGPTLVLRLLADRPPAAESLGLPPA 120 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 + L +GLIL+ GA G+GK+TT A ++ +N+ HILT+EDPVE+ +A + Sbjct: 121 ITALTGRRDGLILIAGAAGAGKTTTAACLIDTINRAGGRHILTVEDPVEFRHAPLGGPVT 180 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 QRE+G H +FA+GL AALR DPDV+L+GE+RD +T+ LAL A TGHLV+ATLH AA Sbjct: 181 QREVGTHTASFAAGLTAALRADPDVVLIGEIRDPQTLALALRTAGTGHLVIATLHAASAA 240 Query: 232 QAVERLVDS----FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVG 287 A++R +D A +D R LA +L AV+ Q+L + GR+ LF LL+ +PAV Sbjct: 241 GAIDRALDLLSFDGGAPGRDAAREALATALAAVVYQRLLARRGGGRIGLFSLLLASPAVK 300 Query: 288 NLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 IR+G+T QLP +++ G+++GM+ + EG Sbjct: 301 AAIRDGQTRQLPALMEIGRRLGMLPEADARDALEAEG 337 >UniRef50_B3PF17 General secretion pathway protein E n=8 Tax=Proteobacteria RepID=B3PF17_CELJU Length = 524 Score = 308 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 112/377 (29%), Positives = 165/377 (43%), Gaps = 69/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ +V+ SD+HL R+RI G + P++ +L L D Sbjct: 148 INAILSQAVREGASDIHLEPFEDRVSVRFRIDGVLTEVLSPKPELAPVLVSRLKVMARLD 207 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 L ++G++ ++ +R S G + LRLL +LEQL P + Sbjct: 208 IAEKRLPQDGRITVRLA-GHAVDIRVSTIPSAFGERIVLRLLDQAAGQLKLEQLNMPRHV 266 Query: 113 PEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L +G+ILVTG TGSGK+TTL A + ++N +ILT+EDPVEYL Sbjct: 267 MERFAKNLLKPHGIILVTGPTGSGKTTTLYAGLSHINT-RSRNILTIEDPVEYLLPGIGQ 325 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 326 TQVNTKVD---MTFARGLRAILRQDPDVVMVGEIRDGETAEIAIQASLTGHLVLSTLHTN 382 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL D LA SL V++Q+L Sbjct: 383 TAIGAVLRLKDMGVE------PFLLASSLEVVMAQRLVRLLCSHCKEQYVPSDAERDMLK 436 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR ++EL+ + +LI E Q + T + Sbjct: 437 LPANTSIYRPAASGCKHCNHQGYRGRKGIYELIEINERLRHLIHEQAGEQ---ELLTEAR 493 Query: 308 VGMITFQQSYQHRVGEG 324 + + V +G Sbjct: 494 KHSPSISDDGRQCVLDG 510 >UniRef50_Q1D9E1 General secretory pathway protein E n=17 Tax=Proteobacteria RepID=Q1D9E1_MYXXD Length = 605 Score = 308 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 101/383 (26%), Positives = 161/383 (42%), Gaps = 74/383 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + K SD+H+ R+R+ G ++ + + + + Sbjct: 221 VNSVLFRAAKERASDIHIEPMERELLVRFRVDGVLQEVIKPPKRYQNAIVSRVKVMGQLN 280 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 L ++G++ ++ + +R S G + +RLL L ++G Sbjct: 281 IAEKRLPQDGRIRIKLA-GRDIDIRLSTIPTSFGERIVMRLLDKTATLLDLAEIGMSQKT 339 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++K +G+ILVTG TGSGK+TTL + +N D +ILT+EDPVEY Sbjct: 340 LESMEAVIKRSHGIILVTGPTGSGKTTTLYGALSKINT-PDLNILTVEDPVEYQLKGIGQ 398 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL TFA GLR+ LR+DPDVI++GE+RD ET +A+ A+ TGHLVL+T+HT Sbjct: 399 MAISPKIGL---TFAQGLRSFLRQDPDVIMVGEIRDKETAEIAIQASLTGHLVLSTVHTN 455 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV RLVD +A SL +L+Q+L Sbjct: 456 DAAGAVTRLVDMGVE------PFLVASSLTGILAQRLVRRVCPDCRVPFEPTDAELKELG 509 Query: 269 ---------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 GR ++E L V L+ K + Sbjct: 510 HSVASFKQRYGVDRIYKASGCPSCNRNGYRGRTGIYEFLPVDDDVRQLVL--KNVDASTI 567 Query: 302 IQTGQQVGMITFQQSYQHRVGEG 324 ++ GM T ++ G Sbjct: 568 KRSATSKGMTTLLDDGARKIALG 590 >UniRef50_P37094 Type IV pilus assembly protein pilF n=83 Tax=cellular organisms RepID=PILF_NEIGO Length = 558 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 159/382 (41%), Gaps = 72/382 (18%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++ +++ SD+H R+R+ G++ V L + D Sbjct: 176 IHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPIAVRGQLASRIKVMSRLD 235 Query: 55 DQRAILLENGQLDFAVSLAEN-QRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPT- 110 + ++G++ R S G + +R+L S L +QLG Sbjct: 236 ISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMRILNSDAASLNIDQLGFEPF 295 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 +L E + G++LVTG TGSGK+ +L + LN + +I T EDP E Sbjct: 296 QKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNTES-VNIATAEDPAEINLPGIN 354 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFA+ L++ LR+DPD+I++GE+RD ET +A+ AA+TGH+V +TLHT Sbjct: 355 QVNVNDKQGL---TFAAALKSFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMVFSTLHT 411 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A + R+++ A +A S+ +++Q+L Sbjct: 412 NNAPATLSRMLNMGVA------PFNIASSVSLIMAQRLLRRLCSSCKQEVERPSASALKE 465 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR ++E++ + + +I T ++ Sbjct: 466 VGFTDEDLAKDWKLYGAVGCDRCRGQGYKGRAGVYEVMPISEEMQRVIMNNGTE--VGIL 523 Query: 303 QTGQQVGMITFQQSYQHRVGEG 324 + GM+ +++ ++ +G Sbjct: 524 DVAYKEGMVDLRRAGILKIMQG 545 >UniRef50_C4XH26 General secretion pathway protein E n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH26_DESMR Length = 600 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 112/347 (32%), Positives = 166/347 (47%), Gaps = 72/347 (20%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEEL----------LREWL 52 + +++A +V+ SD+H+ + +IR R++ +D +++ +R L Sbjct: 222 VNQLLAQAVRDLCSDIHI-EPYQNSLKIRFRLDGVLYDIKTLDKRWHPPVVSHVKIRSKL 280 Query: 53 DDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT 110 D +R L ++G D + N +R S F + G L LRLL S L +LG Sbjct: 281 DIAERR-LPQDGSFDIRLG-NRNVDIRVSVFPTKFGERLVLRLLEKNSRILSLGELGLSP 338 Query: 111 ----VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 L L + +G+ILVTG TGSGKSTTL A++ ++N D +ILT+EDPVEY Sbjct: 339 GHFEELSALARLPHGIILVTGPTGSGKSTTLYALINHINST-DKNILTIEDPVEYQIEGV 397 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + +I L TFA GLR+ LR+DPDVIL+GE+RD+ET ++A AA TGHLV +TLH Sbjct: 398 GQMQVNAKIDL---TFAGGLRSILRQDPDVILVGEIRDTETAQIACQAALTGHLVFSTLH 454 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------- 267 T AA AV R+VD + +RA+++Q+L Sbjct: 455 TNDAASAVTRMVDMGIE------PYMVCSVVRALIAQRLVRVLCPHCKEAFVPTEEDLLP 508 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLI 290 GR ++ ELL+ A+ LI Sbjct: 509 FGPGAAALAGRSFCRAVGCPQCMGTGYRGRTSIHELLVIDEAMAELI 555 >UniRef50_A0LUI4 Type II secretion system protein E n=4 Tax=Bacteria RepID=A0LUI4_ACIC1 Length = 553 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 163/380 (42%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ +V+ SD+H+ R+RI G + +++ + L Sbjct: 175 VNLLITQAVQDRASDIHIEPTERDLRVRFRIDGVLHEVMRSPRNIQSGVISRLKIMADMN 234 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 + ++G++ V+ + LR ++ G + +R+L + L LG Sbjct: 235 IAERRVPQDGRMSVTVN-GKKVDLRVASLPTVWGEKVVMRILDTSTALLTLSDLGFAEDN 293 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 G+ILVTG TGSGKSTTL A + + + +++T+EDPVEY Sbjct: 294 YARYSASFTKPYGMILVTGPTGSGKSTTLYATINII-SSVEKNVITVEDPVEYRLPGINQ 352 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR LR DPD++L+GE+RD ET ++A+ AA TGHLVL+TLHT Sbjct: 353 IQTNVKAGL---TFASALRTILRADPDIVLIGEIRDHETAQIAIEAALTGHLVLSTLHTN 409 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL++ + +L VL+Q+L Sbjct: 410 DAPSAVNRLIEMGIE------PFLVGSALDCVLAQRLARRLCEKCKEPYMPTPQSLREAK 463 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GR+AL E++ T + L E + + + + Sbjct: 464 FPWRDGEPLPTLYRAVGCAACAKTGYKGRIALHEVMTVTEEIERLAVERASAE--AIGRV 521 Query: 305 GQQVGMITFQQSYQHRVGEG 324 ++ GM+T ++ +V G Sbjct: 522 AREQGMVTLREDGLRKVAAG 541 >UniRef50_C9LPW1 4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LPW1_9FIRM Length = 338 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 127/313 (40%), Positives = 181/313 (57%), Gaps = 6/313 (1%) Query: 9 LSVKHNVSDLHLCSAWPARWRIRGRMEAAPF--DTPDVEELLREWLDDDQRAILLENGQL 66 L++ +D+HL R G ++ + + L L D+R + E G Sbjct: 12 LALYPEATDIHLTEGGRVIVREYGGLKELEERAEKSFFDMLFHSSLSPDKRKVYEEKGAC 71 Query: 67 DFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVT 126 D + S+ EN R R + ALR+LP ++E+ ++ K +GLIL + Sbjct: 72 DTSFSIGEN-RFRLHLYRAGGKDCAALRVLP-VLDRVEKDPDEKWFEKIAKLSSGLILFS 129 Query: 127 GATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGL 186 G TGSGKSTT+A ++ + + HI+TLEDPVEY+ ++ + L++QREIG ++FA G+ Sbjct: 130 GPTGSGKSTTMARVLEGIGKEKARHIVTLEDPVEYVLSAGKSLVRQREIGRDAVSFAEGV 189 Query: 187 RAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEK 246 R +LREDPDVI +GE+RD ETI ALTAAETGHLVL TLH A +AV R+V FPA+E+ Sbjct: 190 RESLREDPDVIAVGEMRDRETIAAALTAAETGHLVLGTLHNGRALEAVGRMVHVFPAEEQ 249 Query: 247 DPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 + VR ++ LR V +Q+L V L E+L NTPAV NLIREGK Q+ ++TG Sbjct: 250 NEVRLIISSVLRCVSAQRL-WRMGTKTVLLREILTNTPAVANLIREGKEAQVLSYMETGV 308 Query: 307 QVGMITFQQSYQH 319 M T +Q+ Sbjct: 309 ND-MRTLRQAVYK 320 >UniRef50_B2A563 Type II secretion system protein E n=5 Tax=cellular organisms RepID=B2A563_NATTJ Length = 561 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 159/349 (45%), Gaps = 69/349 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ L++ SD+H R+R+ G M +ELL + D Sbjct: 174 IDTVIKLAIDQEASDIHFEPTSSDMLVRFRVDGMMRQITCFPKHTQELLISRIKIMTNMD 233 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++G+ +F S +N LR SA G + +RLL L++LG Sbjct: 234 ITVKRLPQDGRCEFT-SQEQNIDLRASALPTIFGEKIVIRLLYKEKIIFPLDKLGFKDKE 292 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +L +G+ILVTG TG GK+TTL + + ++N + +I+T+EDPVEY Sbjct: 293 LSQYKAMLADSSGMILVTGPTGCGKTTTLYSSLSWINS-PEKNIITVEDPVEYQLPGVNQ 351 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA GLR+ LR+DPD+I++GE+RD ET R+A+ ++ TGHLV +TLHT Sbjct: 352 VEMNEKAGL---TFAIGLRSILRQDPDIIMIGEIRDLETARIAVRSSLTGHLVFSTLHTS 408 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + A+ RL+D L S++ +LSQ+L Sbjct: 409 NSIGALSRLIDMGIPM------YLLNSSIKGILSQRLVRKICNHCKELYQPSFQELNFYE 462 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREG 293 +GR A+FELL+ + I +G Sbjct: 463 AHANHISYLPNFFRGRGCRICNGTGYQGRKAVFELLVVDNQIKKEIAKG 511 >UniRef50_B3U4T7 Type II secretion system protein E n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4T7_9BACT Length = 770 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 102/391 (26%), Positives = 163/391 (41%), Gaps = 81/391 (20%) Query: 4 EEIVALSVKHNVSDLHLCSAWP-----ARWRIRGRMEAAPFDTPDVEELLREWLD----- 53 +I+A + + SD+H+ R+R+ G P + L Sbjct: 380 NQIIADAFRQGTSDIHIEPYGEKRDTLVRFRVDGDCFEYMKIPPSYRRAIVSRLKIMASL 439 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQR-HGISLALRLLP-SHCPQLEQLGAPT- 110 D ++G++ F + + LR + + + +R+L S ++++G Sbjct: 440 DIAERRKPQDGKIKFKIGENKEIELRVATIPTAGYNEDVVMRILAASEPLPVDKMGFSER 499 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + + + G+IL G TGSGK+TTL +++GY+N D I T EDPVE R Sbjct: 500 NLREIKSIAEKPYGIILCVGPTGSGKTTTLHSVLGYINT-PDIKIWTAEDPVEITQYGLR 558 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + +IG TFA+ +RA LR DPDVI++GE+RD ET + A+ TGHLVL+TLHT Sbjct: 559 QVQVHSKIGF---TFAAAMRAFLRADPDVIMVGEMRDKETADTGIEASLTGHLVLSTLHT 615 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A + + RL+D A ++ VL+Q+L Sbjct: 616 NSAVETITRLLDMGCDS------FSFADAMLGVLAQRLARRICKDCREAYQPSKEEYEEL 669 Query: 269 -----------------------KQEG-----------RVALFELLINTPAVGNLIREGK 294 + +G RVAL ELL+ T + LI+ Sbjct: 670 RLGYGPEYWDTLGVKFDANFRLYRGKGCDTCNRTGLKGRVALHELLLGTDQMKKLIQNK- 728 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 + +++TG GM T Q +V +G Sbjct: 729 -AKTDEMLKTGMAEGMTTLVQDGIQKVLQGH 758 >UniRef50_B4U727 Type II secretion system protein E n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U727_HYDS0 Length = 560 Score = 307 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 102/376 (27%), Positives = 162/376 (43%), Gaps = 68/376 (18%) Query: 4 EEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 + I+ +VK SD+H+ R+RI G ++ +++E L D Sbjct: 184 DSILYRAVKDGASDIHIEPQEKEIVLRFRIDGMLKKIDTYPTNIKEPLVSRFKILANLDI 243 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRL-LPSH--CPQLEQLGAPTV- 111 ++G + +S + Q LR S G + +R+ P +LE LG Sbjct: 244 SERRKPQDGTIKVRISNKKVQ-LRISTLPTIFGEKIVMRVQFPDEFSALKLETLGFEEDE 302 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + G+ILV G TGSGK+TTL +++ LN+ D +I+T EDPVE Sbjct: 303 VEKLKQTYSKPYGIILVVGPTGSGKTTTLYSILQDLNKE-DVNIVTAEDPVEINIPGLNQ 361 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++G TF S LR+ LR+DPD++L+GE+RD+ T +A+ ++ TGHLVL+TLH Sbjct: 362 VQIDEKVGR---TFESVLRSFLRQDPDIMLVGEIRDAITAEIAIKSSLTGHLVLSTLHVN 418 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RL+D ++ SL AV +Q+L Sbjct: 419 DAPSTVARLIDMGIE------PFLISSSLLAVSAQRLVRKLCPYCKIPYEPTKEKREYYG 472 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +GR + EL+ + I + KT + + + + Sbjct: 473 ITTNTIYKASKQGCEHCNYLGYKGRTVIAELMFVDNEIREAINQKKTTE--EIREIAIKK 530 Query: 309 GMITFQQSYQHRVGEG 324 GM T QS +V +G Sbjct: 531 GMKTLFQSGIIKVNKG 546 >UniRef50_D2L4Z0 Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4Z0_9DELT Length = 523 Score = 307 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 97/361 (26%), Positives = 162/361 (44%), Gaps = 52/361 (14%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++ SD+HL R+R+ G + + + L D Sbjct: 163 VNNLFMEAIVQKASDIHLSPYEDGLEMRYRVDGILHVVKQVPRKFQAAIISRLKIIANLD 222 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTVL 112 + ++G++ V + +R + G +R+L Q L G + Sbjct: 223 IAERRIPQDGRIRLKVE-GHDYDIRVAVTPTVFGEGAVMRILDKASIQVALADSGFAPTM 281 Query: 113 P----ELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 EL+K NG+ILVTG TGSGK+TTL + + ++ + + +T+EDPVEY Sbjct: 282 LAQWLELIKRPNGVILVTGPTGSGKTTTLYSSLNHI-KSPEIKFITVEDPVEYQLRGVDQ 340 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++G MTFAS LR+ LR+DPDV+++GE+RD ET +A+ +A TGHLV +TLHT Sbjct: 341 IQVNAKVG---MTFASALRSILRQDPDVLMIGEIRDFETAEIAVQSALTGHLVFSTLHTS 397 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA A+ RL++ +A +L A L+Q+L Sbjct: 398 DAATAITRLIEMGME------PYLVASTLVASLAQRLVRKLCQACRRRAPDGTWSAPGCE 451 Query: 269 -----KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGE 323 +GR+ +FELL T + L+ E + + +Q G+ + + + + Sbjct: 452 LCGGSGYKGRLGIFELLRMTDPMRRLVLEKSDASVLG--ELARQEGLRSLYEDGMAKAAQ 509 Query: 324 G 324 G Sbjct: 510 G 510 >UniRef50_C1SHL1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL1_9BACT Length = 482 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 105/377 (27%), Positives = 163/377 (43%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLH---LCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + + K+ SD+H L + R+RI G++ ++E + + D Sbjct: 105 VNQTIIQAAKNGASDIHFEGLTGKFAVRFRIDGKLHTVKQYPKSLQESIIARIKVVSDLD 164 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAP--- 109 ++G+++ + + +R S G LR+L +++ G P Sbjct: 165 VAETRKAQDGRINLRIG-NRDVDIRVSTVPSVTGEKAVLRILEKSKSLVTIDKTGLPENL 223 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +K NG+ILVTG TGSGK+TTL A + L D +I+T+EDPVEY Sbjct: 224 VPRFRKAIKRPNGIILVTGPTGSGKTTTLYAALQELVSD-DTNIMTIEDPVEYQMEKITQ 282 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + R + + TFAS +RA LR+DPD+IL+GE+RD+ET + A+ A+ TGHLVL+TLHT Sbjct: 283 VQVNRTVDI---TFASAVRAFLRQDPDIILIGEIRDTETAQAAIQASLTGHLVLSTLHTN 339 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL+D D L+ S+ AVL Q+L Sbjct: 340 NAPTAVARLIDM------DVEPFLLSSSIVAVLGQRLVRKLCPHCRKEVSAEQYVKDFFM 393 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ +FE+L T + LI E + + + Sbjct: 394 IEGLEIEKYYEPVGCDRCLHTGFSGRLGVFEMLTITDGIRKLINERADS--SAIAKEARN 451 Query: 308 VGMITFQQSYQHRVGEG 324 G V G Sbjct: 452 AGYKPMMCHGYEMVSSG 468 >UniRef50_B8FI02 Type II secretion system protein E n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI02_DESAA Length = 582 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 104/379 (27%), Positives = 163/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +V + +D+H+ +A R+RI G ++ + + L L D Sbjct: 204 VNIILYWAVDTDATDIHIEAAEKETLVRYRIDGMLQTRHRFPKKIHQPLISRLKVMADMD 263 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTVL 112 ++G + LR S+ ++G + +RLL + L +LG + Sbjct: 264 IAIRRRPQDGAAKIRIK-GRKIDLRLSSLPSQYGEKMVIRLLGNSTKLLTLRELGMSPAM 322 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L GLIL TG TGSGKSTTL A + + + ++T+EDP+EY Sbjct: 323 DEQLRTCLHKPQGLILTTGPTGSGKSTTLYASLKEVISE-EISVVTVEDPIEYEIPGANQ 381 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + G+ TFA+GLRA LR+DP+VI++GE+RD ET +A A+ TGHLVL+TLH Sbjct: 382 VQVNAKAGV---TFANGLRAILRQDPNVIMVGEIRDMETAEIAFRASLTGHLVLSTLHAN 438 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK------------------- 269 + AV RLVD +A S A L Q+L Sbjct: 439 SSISAVTRLVDM------QIKPYLIASSSLAFLGQRLLRRNCQACIEEYEPPAESLERLG 492 Query: 270 ------------------------QEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+ +E+L+ + + LIR+ T Q +++ Sbjct: 493 ILAEKLAGIKYMHGAGCEKCHFSGYSGRIGTYEILMISEEIQELIRQDATEQ--KILKAA 550 Query: 306 QQVGMITFQQSYQHRVGEG 324 GM+T ++ V G Sbjct: 551 TSAGMVTMEEYALEMVAMG 569 >UniRef50_C0A4E0 Type II secretion system protein E n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=C0A4E0_9BACT Length = 574 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 175/380 (46%), Gaps = 72/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR----- 57 + + + +++ SD+HL R+R+R R++ + + L+ + + Sbjct: 193 VYQTILEAIQRRASDIHL-EPMEKRFRVRYRIDGVLIEVDGPPKRLQLAVISRVKIMANI 251 Query: 58 ----AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGA--- 108 + ++G++ S + LR S+ HG S+ +R+L QL QLG Sbjct: 252 SIAEKRIPQDGRIQINFS-GKQIDLRVSSLPTAHGESIVMRILDKEGLQLGLPQLGFMSD 310 Query: 109 -PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + +++ +G+ LVTG TGSGK+TTL + + ++N+ D ++T+EDPVEY + Sbjct: 311 DQATMEKIISMPDGIFLVTGPTGSGKTTTLYSCLHFINK-PDRKLITVEDPVEYQLSGIN 369 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + E+G MTFAS LRA LR+ P+++++GE+RD ET +A+ A+ TGH+V +TLHT Sbjct: 370 QVPVRHEVG---MTFASALRAMLRQAPNIVMVGEIRDLETAEIAINASLTGHMVFSTLHT 426 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE---------------- 271 A AV RL+D ++ SLRAV++Q+L + Sbjct: 427 NDAPGAVTRLIDIGVK------PFLVSTSLRAVMAQRLVRSICKKCIKPYTPDARELRSL 480 Query: 272 ---------------------------GRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR +FE+ I + +I + + + Sbjct: 481 NITPQQAAGATFMKGTGCTECHNTGCRGRKGIFEIFIVNDELQRMIYDNSGS--SRLREK 538 Query: 305 GQQVGMITFQQSYQHRVGEG 324 + +GM T ++ +V G Sbjct: 539 ARSLGMRTMREDGIRKVLAG 558 >UniRef50_B9XRT3 Type II secretion system protein E n=2 Tax=Verrucomicrobia RepID=B9XRT3_9BACT Length = 580 Score = 306 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 102/377 (27%), Positives = 163/377 (43%), Gaps = 72/377 (19%) Query: 6 IVALSVKHNVSDLHLCSAWPA---RWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I+ ++K SD+H+ R+R+ G + ++ L L D Sbjct: 204 ILVQAIKDRASDIHIEPFEKVIRLRYRVDGALLDVTPPPKQMQLALASRLKIMSSLDIAE 263 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV---- 111 L ++G++ VS ++ LR S HG LR+L L++LG Sbjct: 264 RRLPQDGRMRVKVS-GKDYDLRVSFLPTVHGEKCVLRVLDKSNLSASLDKLGLDPDTFQQ 322 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 + S +GLILVTG TGSGK+TTL + + LN +I+T+EDPVE+ + Sbjct: 323 FKAAVDSPHGLILVTGPTGSGKTTTLYSALNELNS-PVYNIVTVEDPVEFQLPGINQVPV 381 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 ++EIGL TFA+ LR+ LR+DPD++++GE+RD+ET +A+ AA TGH VL+T+H A Sbjct: 382 KKEIGL---TFANALRSILRQDPDIVMIGEIRDTETAEIAVEAALTGHQVLSTMHCNDAP 438 Query: 232 QAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------------- 268 A+ RL D A ++ S+ +Q+L Sbjct: 439 GAIVRLDDMGIA------PFLISSSVVLTCAQRLMRRICSHCKEPVTYNEKMYQDLNIDP 492 Query: 269 --------------------KQEGRVALFELLINTPAVGNL-IREGKTHQLPHVIQTGQQ 307 GR+A+ E + + + L I T ++ + Sbjct: 493 GIFDGVTLQRGRGCERCKGSGYSGRLAIIEAMTISDEIRKLVIARANTREMGKI---AIA 549 Query: 308 VGMITFQQSYQHRVGEG 324 GM T + + R +G Sbjct: 550 QGMRTLRMAALDRARDG 566 >UniRef50_Q1D8Z6 Type II/IV secretion system protein n=10 Tax=Deltaproteobacteria RepID=Q1D8Z6_MYXXD Length = 615 Score = 306 bits (784), Expect = 7e-82, Method: Composition-based stats. Identities = 99/381 (25%), Positives = 158/381 (41%), Gaps = 73/381 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAA-----PFDTPDVEELLREWLDD 54 ++ ++ + + SD+H+ R RI G + P P V + D Sbjct: 236 VDYLLRYAFDNRASDIHIEPKRTTSVVRLRIDGVLHPVHTLPAPVHPPIVSRVKMLARID 295 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 ++G++ LR S G + +R+ + QLG Sbjct: 296 ISERRKPQDGRIKTE-RDGREVELRVSTLPTAFGEKVVIRIFDPETLVQDIAQLGFEPDE 354 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +GLILVTG TGSGK+TTL + + L D ++ T+EDP+E ++ + Sbjct: 355 KSAFESWIDQPHGLILVTGPTGSGKTTTLYSALKAL-AGPDVNVTTIEDPIEMVWDAFNQ 413 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q ++GL FA LR LR+DPDVI++GE+RD ET A+ +A TGHLVL+TLHT Sbjct: 414 VQVQPKVGLD---FAGALRHILRQDPDVIMVGEIRDPETAENAIQSALTGHLVLSTLHTN 470 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE----------------- 271 A AV R+ D LA SL V++Q+L Sbjct: 471 DALGAVARMRDLGVPS------FLLAQSLLGVMAQRLLRRVCSHCAQETTLTPDELLALQ 524 Query: 272 ---------------------------GRVALFELLINTPAVGNLI-REGKTHQLPHVIQ 303 GR +FE++ + + +LI RE Q+ Sbjct: 525 APLPLLPGGVRLLKGAGCVRCRGTGFVGRTGVFEIVTSAGELRDLIAREAPYSQMVDA-- 582 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 ++ GM T +++ ++ +G Sbjct: 583 -ARRSGMRTLREAAVRKLAQG 602 >UniRef50_B8HI64 Twitching motility protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HI64_ARTCA Length = 373 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 110/330 (33%), Positives = 175/330 (53%), Gaps = 8/330 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAP--FDTPDVEELLREWLDDDQR 57 ++ ++ ++ SDLHL + + G+ +E D + ++LR+ + + + Sbjct: 21 VDFLLYRALDMKGSDLHLVAGTVPWATVYGKTVHLEGITRVLDADSLSKILRQMVSEQEW 80 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 A E +LDF+ S E RG R +PS P + LG P V+ + Sbjct: 81 AQFWEKKRLDFSYS-TERANFRGHFAIAGGVPMAVFRTIPSVVPDFDDLGLPEVIRSFID 139 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 +E GL L G TGSGKS++LAA++ + I T+E P+E+ +++ + L+ QRE+G Sbjct: 140 AEAGLYLFIGVTGSGKSSSLAALIKLAKEKYAKKITTIEAPIEFRHSNGKSLVVQREVGR 199 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA G+ ALRE+PD+IL+GE+RD ET+ AL+A +GHLV +TLH A A R+ Sbjct: 200 DVDSFALGVEDALRENPDIILVGEMRDPETMSAALSATSSGHLVFSTLHAGSTADAPARI 259 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 +++ PA R QLA SLR V+ QKL K GRV E+L+ A+ N+I+ T Sbjct: 260 LEAMPADRVADTRAQLARSLRGVVYQKLLPVKGGQGRVVATEVLMMNQAISNMIKNNNTE 319 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + + + G I F+ S + V +G + Sbjct: 320 GIAGQL-LAKDSGSIPFEVSLVNLVMDGII 348 >UniRef50_A6Q5B1 General secretory pathway protein E n=3 Tax=Epsilonproteobacteria RepID=A6Q5B1_NITSB Length = 560 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 161/379 (42%), Gaps = 75/379 (19%) Query: 6 IVALSVKHNVSDLHLCSAWP---ARWRIRGRM------EAAPFDTPDVEELLREWLDDDQ 56 I+ S+ SD+H+ R R+ G + + ++ D L +D + Sbjct: 182 IIEDSIHRRASDIHIEPDEKRSSVRVRVDGVLYETFVFDLEIYNALDTRIKLLGGMDISE 241 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV--- 111 R ++G+ V + R S+ +G SL +R+L +LE+LG Sbjct: 242 RRK-PQDGRFSLTVG-GKPFDFRLSSTPTIYGESLVMRILDREKVLLKLEELGFSPKNLD 299 Query: 112 -LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 +++ G++L+TG TGSGK+TTL A + + + I+T+EDPVEY + + Sbjct: 300 KFLDVIHEPYGIVLITGPTGSGKTTTLYAALNEIKSIHN-KIMTVEDPVEYRLPLVQQVQ 358 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 + GL TFA +++ LR+DPDV+L+GE+RD ET+ + AA TGHLV ATLHT A Sbjct: 359 VNEKAGL---TFAVAVKSFLRQDPDVMLIGEIRDFETLNASAQAALTGHLVFATLHTNDA 415 Query: 231 AQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV----------------------- 267 A+ RLV + +A +L +++Q+L Sbjct: 416 PGAIPRLV------QMGLKPYMIADALIGIVAQRLVRKICPYCKAEYKPPLSLLKKIEQY 469 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREG--KTHQLPHVIQTG 305 GR + E+L+ + LI EG K L + ++ Sbjct: 470 LPKDKEVHFYHGKGCAKCDFTGYFGRTMIAEILVVDDEIARLISEGATKFEILHYAMEQT 529 Query: 306 QQVGMITFQQSYQHRVGEG 324 M+ Q + +G Sbjct: 530 DFEPMV---QDGIKKALQG 545 >UniRef50_A1TUR3 General secretory pathway protein E n=5 Tax=Proteobacteria RepID=A1TUR3_ACIAC Length = 578 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 104/379 (27%), Positives = 162/379 (42%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + SD+HL R+R+ G ++ P + + + D Sbjct: 196 VNAIIGRVIDLRASDIHLEPFDDGLHVRYRVDGVIQLGELVPPRLSAAVSSRVKLLAHLD 255 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 L ++G++ V LR S HG S+ +R+L QLE +G Sbjct: 256 IAERRLPQDGRIKTRVK-GRELDLRVSTVPTVHGESVVMRVLDRASVRLQLETMGFEKDT 314 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E LL +G++LVTG TGSGK+TTL A + ++ ++ I+T+EDPVEY Sbjct: 315 LERFNMLLAKPHGILLVTGPTGSGKTTTLYAALSKIDAESN-KIITVEDPVEYQLEGINQ 373 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA+ LR+ LR+DPD+I++GE+RD ET ++A+ +A TGHLVL+TLHT Sbjct: 374 IQVHPQINL---TFANALRSILRQDPDIIMIGEMRDGETAQIAVQSALTGHLVLSTLHTN 430 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV R+ D + S+ VL+Q+L Sbjct: 431 TAAGAVIRMKDMGVEG------YLITSSVNGVLAQRLVRTLCSHCKEPYEPGDEVRRTTG 484 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + EL + + I +GK + + Sbjct: 485 LHRFSTFGQAIYRAVGCEHCRGSGYRGRTGIHELFVLDEPMRRAIIDGKDANALNTL--A 542 Query: 306 QQVGMITFQQSYQHRVGEG 324 Q GM+ + +V G Sbjct: 543 AQGGMLNLYEDGLRKVAAG 561 >UniRef50_C0GMA1 Type II secretion system protein E n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMA1_9DELT Length = 594 Score = 305 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 107/392 (27%), Positives = 168/392 (42%), Gaps = 83/392 (21%) Query: 3 MEEIVALSVKHNVSDLHLCSA-----WPARWRIRG------RMEAAPFDTPDVEELLREW 51 + ++ + + SD+H+ + R R+ G ++ A + Sbjct: 203 VNALLLEAWRRKASDIHIEPSPGSRYCLIRMRVDGTCHEFKKIRLALAKPLVSRLKIMSS 262 Query: 52 LDDDQRAILLENGQLDFAV-SLAENQRLRGSAFAQRHG-ISLALRLLPSHCP-QLEQLGA 108 LD +R L ++G+L + +++ R + G + LR+L S P L++LG Sbjct: 263 LDIAERR-LPQDGKLKIKLPEVSQVLEFRVATVPTTGGQEDVVLRVLTSGKPITLKELGL 321 Query: 109 P----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 +L+K GLILV G TGSGK+TTL + + +N D + T EDPVE Sbjct: 322 SSNNLEHFDKLIKKPYGLILVVGPTGSGKTTTLHSALSCINT-PDKKVWTAEDPVEISQE 380 Query: 165 SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLAT 224 R + +IGL TFA LR+ LR DPDVI++GE+RD ET +A+ A+ TGH+V +T Sbjct: 381 GLRQVQVNPKIGL---TFAHLLRSFLRADPDVIMVGEMRDRETAHIAVEASLTGHIVFST 437 Query: 225 LHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD---------------- 268 LHT A + + RL+D D A SL VL Q+L Sbjct: 438 LHTNTAPETITRLLDM------DLDPFNFADSLLCVLGQRLIKTLCPRCKEKYNPDSAEL 491 Query: 269 ------------------------------------KQEGRVALFELLINTPAVGNLIRE 292 GR+ + EL++NT + +LI+ Sbjct: 492 QELEMEYGEGFNAWKEHYFHKKAVLYRGKGCRDCIGGYRGRLGIHELMLNTDKIKDLIKF 551 Query: 293 GKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 K+ + + Q GM++ +Q H+V G Sbjct: 552 RKSAE--EIRQQATMEGMLSLKQDGIHKVLAG 581 >UniRef50_UPI0001BC4418 general secretion pathway protein E n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4418 Length = 531 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 96/377 (25%), Positives = 159/377 (42%), Gaps = 70/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDDDQ--- 56 + I+ V+ SD+H+ R+RI G + + ++ + L Sbjct: 155 LSAIIIQGVERGASDIHIEPGKDYIRIRYRIDGILTETEKISLELLSPMISRLKIISNLD 214 Query: 57 --RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 + ++G+ D + R S +G +R+L + E ++G Sbjct: 215 ITERRMPQDGRFDLEIR-ERKIDFRVSVMPVINGEKAVIRILDKEIIEFEIDKIGMEKSD 273 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L L +NG+ L++G TGSGKS+TL A++ LN + +I T+EDPVEY Sbjct: 274 YDRLLFQLNRKNGIFLISGPTGSGKSSTLYALLKKLNT-GEVNISTVEDPVEYEIDGINQ 332 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + IG TFAS LRA LR+DPD++++GE+RD ET +A+ AA TGHLVL+T+HT Sbjct: 333 VQCKNNIGR---TFASVLRAYLRQDPDILMVGEIRDQETAEIAVKAAITGHLVLSTIHTN 389 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + + RL++ ++ SL A+LSQ+L Sbjct: 390 DSIGGINRLLNIGIQ------PYMVSASLIAILSQRLVRKLCPHCQEKDEKWKAKIQLLG 443 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR A+FE+ + +I +G + Q + + Sbjct: 444 HDYEKYHENMFYIGKGCESCNYSGYKGRTAIFEIFEPNEKIKEMIEKGNSAQ--EIEKEA 501 Query: 306 QQVGMITFQQSYQHRVG 322 GM + +V Sbjct: 502 LNDGMKKLVEDGIEKVK 518 >UniRef50_Q894E4 General secretion pathway protein E n=1 Tax=Clostridium tetani RepID=Q894E4_CLOTE Length = 482 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 87/369 (23%), Positives = 171/369 (46%), Gaps = 61/369 (16%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++ SD+H+ R+RI G + + ++ ++ + D Sbjct: 118 LNYFLKEAIFKKASDIHIEPFEGKAIVRFRIDGVLHEFWKLSQELYRQIKGRIKILSNMD 177 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 ++G+ F ++ +R S + + +RLL +L+ LG Sbjct: 178 IAEKRYPQDGKFKFNF-YKKDLDIRVSTMPTLYDEKIVMRLLYKSEVLIKLKDLGFYGES 236 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++ K +G+ILVTG TGSGK+TTL +++ +++ +I+T+E+PVEY Sbjct: 237 FHEIKKISKYSSGMILVTGPTGSGKTTTLYSIINEMDKKH-RNIITIEEPVEYSMDGVNQ 295 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IG MTF++ L+ LR+DPDVI++GE+RD ET ++A+ A+ TGHLVLA+LHT+ Sbjct: 296 INIREKIG---MTFSNVLKYTLRQDPDVIMIGEIRDKETAKIAIRASLTGHLVLASLHTK 352 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 ++ RL+D L +L A++SQ+L Sbjct: 353 DPLSSIIRLIDMGVPD------YLLMEALNAIISQRLVRKLCPFCKEKFFYEAMNSEIYK 406 Query: 268 ---------DKQEGRVALFELLINTPAVGNLIREG-KTHQLPH-VIQTGQQVGMITFQQS 316 GRV ++E +I + ++ +G +++ ++ + +++ Sbjct: 407 KVGCEKCNDTGYLGRVLIYEKVILDEDIKEMVLKGCNMNEIRKYTLEKNKT----NLEEN 462 Query: 317 YQHRVGEGR 325 + + +G+ Sbjct: 463 ALNLIKKGK 471 >UniRef50_P31742 General secretion pathway protein E n=23 Tax=Gammaproteobacteria RepID=GSPE_XANCP Length = 567 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 95/379 (25%), Positives = 161/379 (42%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + ++ +V+ SD+H+ R+R+ G + + + + + Sbjct: 188 VNLVIQHAVELRASDIHIEPFESRLKVRYRVDGVLVEGESPPAKLTAAVISRIKIMAKLN 247 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 L ++G++ V + LR S HG S+ +RLL + +LG Sbjct: 248 IAERRLPQDGRIMLRVQ-GKELDLRVSTVPTAHGESVVMRLLDRETVVFDFYKLGFTEDF 306 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++L+ +G++LVTG TGSGK+TTL + LN D I+T+EDPVEY Sbjct: 307 LPQFRKVLEQPHGIMLVTGPTGSGKTTTLYTALSQLNTS-DVKIITVEDPVEYQIEGINQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL FA+ LR+ +R+DPD+I++GE+RD ET R+A+ +A TGHLVL+TLHT Sbjct: 366 IQAKPQIGLD---FANALRSIVRQDPDIIMIGEMRDLETARIAIQSALTGHLVLSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLE---------------------- 266 AA + RL+D L ++ +L+Q+L Sbjct: 423 NAAGGITRLLDMGVED------YLLTSTINGILAQRLVRKLDLANAERYAASPEEIERFD 476 Query: 267 ---------------------VDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + E L+ + + + + + Q Sbjct: 477 LRRLQPDGEIFLYRPRATAAAPTGYLGRTTIVEFLVMNDELRRAVM--RRAGMGEIEQLA 534 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ GM T + + G Sbjct: 535 RKSGMRTMYEDGLSKALRG 553 >UniRef50_Q15ZI3 Type II secretion system protein E n=119 Tax=Proteobacteria RepID=Q15ZI3_PSEA6 Length = 637 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 95/280 (33%), Positives = 144/280 (51%), Gaps = 25/280 (8%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ I +++ SD+H+ R R+ G ++ ++ L L D Sbjct: 184 LQSIFEDALQTKASDIHIEPDSEMLRIRLRVDGVLQENIIKEKNIASALVLRLKLMSGLD 243 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVL 112 L ++G+ + + + +R S ++G S+ +RLL LEQ G P L Sbjct: 244 ISEKRLPQDGRTNMRIK-GHSIDVRVSTMPVQNGESVVMRLLDQSAGVLSLEQTGMPAAL 302 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + LL+ +G+ILVTG TGSGK+TTL + LNQ A I+T+EDPVEY Sbjct: 303 LKRFRVLLRRPHGMILVTGPTGSGKTTTLYGALSELNQ-PSAKIITVEDPVEYRLPRINQ 361 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL+ F++ LR LR+DPD+I++GE+RD ET + L A TGHLVL+TLHT Sbjct: 362 VQTNSKIGLN---FSNVLRTTLRQDPDIIMVGEMRDQETAEIGLRGALTGHLVLSTLHTN 418 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD 268 A + RL+D +A SLRAV++Q+L Sbjct: 419 DAISSAVRLLDMGAPG------YLVASSLRAVIAQRLVRK 452 >UniRef50_B0RYX5 Type II secretory pathway ATPase n=78 Tax=cellular organisms RepID=B0RYX5_XANCB Length = 634 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 103/380 (27%), Positives = 164/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPA---RWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ + + SD+HL A R+RI G + P V + + D Sbjct: 252 VDWLLQYAYEQRASDIHLEPRREAGRMRFRIDGVLHKVLEVPPTVMTAVVSRIKVLGRMD 311 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 ++G++ +R S G +R+ +EQLG Sbjct: 312 LAERRRPQDGRIKTRSPGGREVEMRLSTMPTAFGEKCVMRIFDPDSAFKSIEQLGFSAEE 371 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L++ +G++LVTG TGSGK+TTL + + L D ++ ++EDP+E + Sbjct: 372 AAGWSALVERPHGIVLVTGPTGSGKTTTLYSTLKRLAT-PDVNVCSVEDPIEMIAPEFNQ 430 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q+ I L FASG+R LR+DPD+I++GE+RD ET ++A+ A+ TGHLVL+TLHT Sbjct: 431 MQVQQNIDLD---FASGVRTLLRQDPDIIMIGEIRDLETAQMAVQASLTGHLVLSTLHTN 487 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLE---------------------- 266 AA A+ RL+D +A +L VL+Q+L Sbjct: 488 DAASAITRLLDLGVPH------YLVASTLNGVLAQRLVRTLCVHCKRPHTLSEADWAAIQ 541 Query: 267 ----------------------VDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GRV L+ELL TP + +LIR L Q Sbjct: 542 EPGEALPEVLTVHAPVGCLECRRTGYLGRVGLYELLPVTPRLRSLIRADT--DLASFSQA 599 Query: 305 GQQVGMITFQQSYQHRVGEG 324 + G+ T +++ +V G Sbjct: 600 ARGDGLRTLRRTGLEKVAAG 619 >UniRef50_A1WFR3 Type II secretion system protein E (GspE) n=8 Tax=cellular organisms RepID=A1WFR3_VEREI Length = 578 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 166/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + SD+HL R+RI G + P + + + D Sbjct: 195 VNTIIGRVIDLRASDIHLEPFDDGLHVRYRIDGVIHPGELVPPRLSAAVNSRVKLLAHLD 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 L ++G++ + LR S HG S+ +R+L +LE +G Sbjct: 255 IAERRLPQDGRIKTRLK-GRELDLRVSTVPTVHGESVVMRVLDRASVRLELESMGFEPDT 313 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L LL +G++LVTG TGSGK+TTL A + ++ + I+T+EDPVEY A Sbjct: 314 LARLATLLARPHGILLVTGPTGSGKTTTLYAALTKIDA-GEQKIITVEDPVEYQLAGINQ 372 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA+ LR+ LR+DPD+I++GE+RD ET ++A+ +A TGHLVL+TLHT Sbjct: 373 IQVHTQIDL---TFANALRSILRQDPDIIMIGEMRDGETAQIAVQSALTGHLVLSTLHTN 429 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV R+ D + ++ VLSQ+L Sbjct: 430 TAAGAVVRMQDMGVE------PYLITSAVNGVLSQRLVRTLCEHCKQAHDPGPEIRQRTG 483 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + ELL+ ++ I EG+ + H + Sbjct: 484 LARFCAAGQPVYRAVGCEHCRQSGYRGRTGIHELLLLDDSLRRAIIEGRDANILHAM--A 541 Query: 306 QQVGMITFQQSYQHRVGEGR 325 Q GM++ + +V GR Sbjct: 542 VQGGMLSLYEDGLRKVAAGR 561 >UniRef50_A8URM8 Putative uncharacterized protein n=3 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URM8_9AQUI Length = 552 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 102/385 (26%), Positives = 165/385 (42%), Gaps = 76/385 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ + + +D+H+ +RI G + ++ L + D Sbjct: 169 VDLFMNEGIIERATDVHISPESLASHVFYRIDGVLHHYFSIPAELHPSLVSRVKIISGMD 228 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 L ++G + L E+ +R S +G ++ +RLLP + L+ LG + Sbjct: 229 ISEQRLPQDGGFSYTF-LGESYDVRASTLPTAYGENVVMRLLPKNLSLFNLKNLGFEEDI 287 Query: 113 ----PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E++ G+ILVTG TGSGK+TTL A + +N +ILT+EDP+EY + + Sbjct: 288 LQEFEEVISKPYGMILVTGPTGSGKTTTLYASLRRINSLR-KNILTVEDPIEYRFPFIKQ 346 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + G TFA +R LR+DPDVIL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 347 TQVNEKAG---YTFAKAVRHFLRQDPDVILVGEIRDEETAEMAVRAAITGHLVLSTLHTN 403 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RL+D + +A + A+ +Q+L Sbjct: 404 DAVSTIPRLIDLKVKE------YMVASGVLAISAQRLIRKICMFCREAYKTTKEELKAFG 457 Query: 268 ----------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 GRVA+ ELL +G++I G Sbjct: 458 FSEESLDKYVDKDELTLFRGKGCEHCRGTAYLGRVAVVELLRVDEEIGDMIVRGYPPL-- 515 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEG 324 ++Q ++ GM T ++ +V +G Sbjct: 516 AILQRAKEKGMRTLKEDGLLKVLKG 540 >UniRef50_Q00512 General secretion pathway protein E n=10 Tax=Proteobacteria RepID=GSPE_PSEAE Length = 502 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 104/377 (27%), Positives = 167/377 (44%), Gaps = 69/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +++ N SD+HL + R+R+ G + ++ LL + D Sbjct: 126 INAILGEAIRENASDIHLETFEKRLVVRFRVDGVLREVLEPKRELAALLVSRIKVMARLD 185 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 + ++G++ V +R S +G + LRLL L+ LG Sbjct: 186 IAEKRIPQDGRISLRVG-GREVDIRVSTLPSANGERVVLRLLDKQAGRLNLQHLGMSERD 244 Query: 113 PELL----KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+ + +G++LVTG TGSGK+TTL A + LN +ILT+EDP+EY Sbjct: 245 RKLMDETVRKPHGILLVTGPTGSGKTTTLYASLTTLN-DRTRNILTVEDPIEYHLEGIGQ 303 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 304 TQVNAKVD---MTFARGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTLHTN 360 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RLVD L+ S+ VL+Q+L Sbjct: 361 SAIGAITRLVDMGIE------PFLLSSSMLGVLAQRLVRVLCPACKEPYRADEAECALLG 414 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR ++EL++ + +LI + Q + + + Sbjct: 415 VDPAAPPTLHRARGCGECHQHGYRGRTGIYELVVFDDHMRSLIHNESSEQ--EMTRHART 472 Query: 308 VGMITFQQSYQHRVGEG 324 G + + + +V EG Sbjct: 473 SG-PSIRDDGRRKVLEG 488 >UniRef50_C4L4L3 Type II secretion system protein E n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L4L3_EXISA Length = 556 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 96/377 (25%), Positives = 163/377 (43%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ ++ SD+H R+RI G + ++ ++ L D Sbjct: 175 VNQLFLSAIDQRASDIHFDPHEKQLHVRFRIDGDLRTETVYPKKIQSVMLTRLKVMSNLD 234 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA---- 108 + L ++G++ + + R S +G + +R+L S L +LG Sbjct: 235 ITESRLPQDGRIKYTLR-NRAYDFRVSTLPTMYGEKIVIRVLDSSQGLTDLTKLGFGERN 293 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++LK NG+IL+TG TGSGKS+TL A + LN +I+T+EDPVEY Sbjct: 294 EQAYRDMLKRPNGIILITGPTGSGKSSTLYASLKELNDET-KNIITVEDPVEYQLDGINQ 352 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFASGLR+ LR+DP+++++GE+RD+ET +A+ A+ TGHLVL+TLHT Sbjct: 353 VQVNSKVGL---TFASGLRSILRQDPNIVMVGEIRDTETAEIAIRASLTGHLVLSTLHTN 409 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RLVD +A S +++Q+L Sbjct: 410 SAISSITRLVDMGVE------PFLVAASTTGLVAQRLVRRVCRDCGQVEPVSKSERSLFD 463 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+A+ E++ + +I T ++ + Sbjct: 464 AEGVHIDHIVRGKGCASCNFTGYRGRLAIHEVVPIDEGLRRMIMNQATE--SEMVDYAKS 521 Query: 308 VGMITFQQSYQHRVGEG 324 G + +V G Sbjct: 522 QGATFLLEDGLEKVAAG 538 >UniRef50_B1ZUM1 Type II secretion system protein E n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUM1_OPITP Length = 586 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 81/389 (20%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLR------------E 50 + +++A +V+ +D+H + RIR R++ P E LLR Sbjct: 198 VSDVIAQAVEDQATDIHF-EPQEGQLRIRYRVDGLLVPVPVPENLLRFQDAIISRLKIMA 256 Query: 51 WLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGA 108 L+ +R L ++G+++F + +R S + S++LRLL +++LG Sbjct: 257 RLNISERR-LPQDGRINFR-AENTVLDIRVSTIPTIYAESVSLRLLNQKKEAYSMDRLGM 314 Query: 109 PTV----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 + ++L +G+ILVTG TGSGKST+L A + +N D I+T+EDP+EY Sbjct: 315 SAEEQAQISQVLDYPHGIILVTGPTGSGKSTSLNAFLRKINST-DLRIITIEDPIEYEVP 373 Query: 165 SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLAT 224 + + EIGL TFA LR LR+DPDVI++GE+RD +T +A+ A+ TGHLV +T Sbjct: 374 GVNQMQVRPEIGL---TFADALRHVLRQDPDVIMVGEIRDKDTAEIAIRASLTGHLVFST 430 Query: 225 LHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD---------------- 268 LHT A A+ RLVD +A ++ V++Q+L Sbjct: 431 LHTNDAPGAITRLVDMGIE------PFLVASAIELVIAQRLVRRLCPVCSRDEPANKIKL 484 Query: 269 --------------------------------KQEGRVALFELLINTPAVGNLIREGKTH 296 GR+ LFE+ + L+ + ++ Sbjct: 485 RESLSILGCPAEEADTVEALKAPVGCDRCRGTGYRGRIGLFEIFRLNDEMHELVLKREST 544 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 + + ++ GM T QS +V G Sbjct: 545 RTLD--ECARRHGMRTLGQSGWEKVKAGY 571 >UniRef50_B1ZZG2 Type II secretion system protein E n=8 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZZG2_OPITP Length = 560 Score = 303 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 103/376 (27%), Positives = 166/376 (44%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ +++ +V+ + SD+H + R+R+ G + + + L + Sbjct: 187 VDVVLSQAVRAHASDVHFEPFEHEFKIRYRVDGALYEMAPPPKALALPVTSRLKVLADLN 246 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTVL 112 + ++G++ V LR S + G S+ LR+L LE +LG P + Sbjct: 247 IAERRVPQDGRIRLVVD-DHPVDLRVSTLPTQFGESVVLRVLDRSAVHLELGELGMPEDV 305 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++ NG+++VTG TGSGK+TTL + + +N + +LT EDPVEY Sbjct: 306 LRGITGTIRRPNGILVVTGPTGSGKTTTLYSALRAINST-ELKLLTAEDPVEYEIEGIMQ 364 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL +FA+ LR+ LR+DPDVIL+GE+RD ET ++A+ A+ TGHLVL+TLHT Sbjct: 365 VPVNPGIGL---SFAAALRSFLRQDPDVILVGEIRDLETAQMAIQASLTGHLVLSTLHTN 421 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK----QEGRVA--------- 275 A A+ RL+D LA +L VL+Q+L + RV Sbjct: 422 DAVGAIARLLDLGVE------PFLLASTLEGVLAQRLVRRVCVRCRTQRVPSRELGAQLG 475 Query: 276 ---------------------------LFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +FE L T + +I G Q + + Sbjct: 476 GFENEPLCAAGPGCAECGGTGYRGRRGIFEWLRITEGLREMIVAGAPSQ--DLRRQAVAG 533 Query: 309 GMITFQQSYQHRVGEG 324 GM T ++ + G Sbjct: 534 GMRTLREDGLRALQAG 549 >UniRef50_Q1YQV4 Putative general secretion pathway protein E n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQV4_9GAMM Length = 492 Score = 303 bits (777), Expect = 5e-81, Method: Composition-based stats. Identities = 116/377 (30%), Positives = 171/377 (45%), Gaps = 71/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A S+K N SD+H+ R+R+ G + + + LL + D Sbjct: 119 LNAVIAESLKENASDIHIEPYEKEALVRFRLDGVLRTVLTPSIQIAPLLISRIKVMSKLD 178 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 L ++G++ + + LR S HG + +RLL +L + LG P Sbjct: 179 IAERRLPQDGRMGVRLG-GRSIDLRVSTMPSSHGERVVMRLLDKDAGKLKTDDLGMPQDT 237 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L +L+ +G+ILVTG TGSGK+TTL A + +++ +I+T+EDPVEY Sbjct: 238 KAELVDLVSRPHGIILVTGPTGSGKTTTLYAALQQMDRQ-QRNIMTVEDPVEYDLPG--- 293 Query: 169 LIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 I Q +I L MTFA GLRA LR+DPDVIL+GE+RD ET +A A+ TGHLVL+TLHT Sbjct: 294 -ISQTQINLRAGMTFARGLRAILRQDPDVILIGEIRDGETAEIATQASLTGHLVLSTLHT 352 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 AA A+ RL D LA ++R ++SQ+L Sbjct: 353 NTAAGAITRLQDLGVDS------FLLASTVRGIVSQRLLRKLCTDCRVSEQPNEFNRNLL 406 Query: 268 -------------------DKQEGRVALFELLINTPAVGNLIREGKTH-QLPHVIQTGQQ 307 +GR ALFEL+ + LI E +L I+ Sbjct: 407 QLQPGEEIFQSSGCSECNNTGFKGRQALFELVSVDANLQTLIHENAGELELESAIRKTVP 466 Query: 308 VGMITFQQSYQHRVGEG 324 + + + V G Sbjct: 467 ----SIRDAGFELVRRG 479 >UniRef50_B1ZZ35 Type II secretion system protein E n=4 Tax=Bacteria RepID=B1ZZ35_OPITP Length = 568 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 105/380 (27%), Positives = 151/380 (39%), Gaps = 71/380 (18%) Query: 4 EEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I+ + SD+H+ R+R+ G V L L D Sbjct: 186 NRIIEDAYFAGASDIHVEPQEKEMMVRYRVDGMCSEKLRLPARVGPALVARLKIMCNLDI 245 Query: 56 QRAILLENGQLDFA--VSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV 111 L ++G++ F + LR S HG + +R+L L LG Sbjct: 246 AERRLPQDGRIIFKQYTKKGLDLDLRVSTAPLNHGEGVVMRILDKQKTTLPLPMLGFTEE 305 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 E ++ G+IL G TGSGKS TL + + +N D I T EDP+EY Sbjct: 306 NLGKYRECIRQPYGMILHCGPTGSGKSMTLYSALNEINT-PDIVIRTAEDPIEYTLPGLN 364 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + R+IGL TFAS LRA LR+DPDVIL+GE+RD ET +A+ AA TGHL+++TLHT Sbjct: 365 QMQMHRQIGL---TFASALRAFLRQDPDVILVGEIRDKETADIAVEAALTGHLLISTLHT 421 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A V RL D ++ SL V +Q+L Sbjct: 422 NDAPSTVARLTDMGIE------PFMISSSLLCVCAQRLMRRVCKTCRVPYVPQGREDEIL 475 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GRV + EL++ + I K + + + Sbjct: 476 QKAIGWSGQIFKPNPKGCPKCNSTGYKGRVGIHELMVTNEELIEGI--NKQLETAEIKKI 533 Query: 305 GQQVGMITFQQSYQHRVGEG 324 + GM T Q +V +G Sbjct: 534 AVRGGMKTLHQDSLIKVRDG 553 >UniRef50_B0UAH1 Type II secretion system protein E n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAH1_METS4 Length = 541 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 109/381 (28%), Positives = 165/381 (43%), Gaps = 72/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ +V+ +D+HL + R RI GR+ D+ + + D Sbjct: 162 IDALLERAVEVGATDIHLETGREELRVRLRIDGRLRLHQTLPKDMAPAIISRVKILAGLD 221 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAP--- 109 L ++G+ + V +E LR + +G + LR+L + ++G Sbjct: 222 IAERRLPQDGRTNVRVRASE-ADLRVAVMPTLYGETAVLRILVKDARLLDFARVGLSARD 280 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L +L +GLI+VTG TGSGK+TTLA V LN I+T+EDP+EY Sbjct: 281 RDALERMLGEPHGLIIVTGPTGSGKTTTLATAVSLLN-DPARKIVTVEDPIEYQIPGIHQ 339 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL TFA+ LR+ LR DPDVI++GE+RD ET + + AA TGHLVL TLHT Sbjct: 340 TQIKPGIGL---TFANALRSFLRHDPDVIMVGEMRDRETAAIGIQAALTGHLVLTTLHTN 396 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE----------------- 271 A AV RL D +A SLR V+ Q+L E Sbjct: 397 SAPDAVIRLADMGVE------PYLIAASLRGVVGQRLVRRLCERCRAPDPDGGAALDAVC 450 Query: 272 ----------------------------GRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GRV +FE++ A+ LIR + +++ Sbjct: 451 ARRGFARPGGGRVHRPVGCPHCGGSGFRGRVGVFEVMPVDEALTGLIRREPDPLV--LLR 508 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 ++ GM T + + +G Sbjct: 509 AAREAGMTTMLEDGLAKAADG 529 >UniRef50_D1B5J6 Type II secretion system protein E n=3 Tax=Synergistaceae RepID=D1B5J6_THEAS Length = 559 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 108/370 (29%), Positives = 172/370 (46%), Gaps = 56/370 (15%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEEL------LREWLD 53 + I+ +VK SD+H+ + R+RI G + + ++ + +D Sbjct: 185 VNSIMEQAVKEGTSDIHIEVFERSARVRYRIDGALFDSLEYPRNLHPAVCSRIKIMSGMD 244 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPT- 110 +R ++G++ V + LR S+ G + +RLL LE+LG Sbjct: 245 ISERRK-PQDGRILVKVG-NKRVDLRVSSLPALFGEKIVMRLLDQENAMVGLEKLGFEPN 302 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 +L +++ G+ILVTG TGSGKSTTL +++ +N D +I+T+EDPVEY Sbjct: 303 EKALLEDMISLPYGIILVTGPTGSGKSTTLYSLLEVMNT-PDVNIITVEDPVEYTMPGIT 361 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TF+ LR+ LR+DPD I+LGE+RD ET +LA+ AA TGHLVL+TLHT Sbjct: 362 QVQVNEKAGL---TFSETLRSILRQDPDKIMLGEIRDQETAQLAIRAALTGHLVLSTLHT 418 Query: 228 RGAAQAVERLVDSFPA------------------------QEKDPVRNQLAGSLRA---- 259 A AV RL+D + + + +A SL Sbjct: 419 NDAPSAVARLLDMGIQPFMVSSAVVGVVAQRLARRLCNFCKREMEIPPSVARSLDLPEGT 478 Query: 260 -----VLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQ 314 V + +GR ALFE+++ + I EG + + + GM T + Sbjct: 479 RVFAPVGCDECRNTGYKGRTALFEIMMVDEEIKRAIAEGAP--VYEIRKLAISKGMTTLR 536 Query: 315 QSYQHRVGEG 324 ++ +V +G Sbjct: 537 RAGIKKVLDG 546 >UniRef50_UPI0001746BDE type II secretion system protein E n=3 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746BDE Length = 584 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 102/381 (26%), Positives = 177/381 (46%), Gaps = 74/381 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEEL---------LRE 50 + +++ ++ +D+H+ R+RI G + P +++ L + Sbjct: 201 VNQVIREALLQRATDIHVEPVQDNLRIRYRIDGVLHEVPV-PENIKSLQASVLARIKVMA 259 Query: 51 WLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT 110 LD ++ L ++G+++ + ++ +R + G S++LRLL L +LG Sbjct: 260 RLDIAEKR-LPQDGRINLKLD-NQSIDVRVACIPSVEGESISLRLLGQERFTLAKLGLNA 317 Query: 111 VLPE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 LL NG++LVTG TGSGKSTTL + LN + I+T+EDPVE+ Sbjct: 318 EYRSKVDTLLARPNGIVLVTGPTGSGKSTTLYTFLSQLNSIS-RRIVTIEDPVEHKLPGV 376 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + EI +TFASGLR+ LR DP+V+++GE+RD ET +A+ A+ TGHLV +TLH Sbjct: 377 VQIAVKPEI---SLTFASGLRSILRGDPNVVMVGEIRDLETAEIAVRASLTGHLVFSTLH 433 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------- 267 T A + RLV+ ++ S+RA ++Q+L Sbjct: 434 TNDAVGGITRLVEMGVE------PFLVSSSVRAFIAQRLVRSLCPQCRKPASYSPEQLSA 487 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GR A++EL++ TPA+ +LI + +++ Sbjct: 488 AGFAIPVGHIIYSAAQSGCPACRSTGYYGRTAIYELVMVTPAIQDLIAQKANA--NTLLR 545 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 ++ G I+ ++ +V +G Sbjct: 546 QARRDGFISMREYGWQKVLDG 566 >UniRef50_Q2S330 Twitching motility protein PilT n=2 Tax=Rhodothermaceae RepID=Q2S330_SALRD Length = 476 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 101/342 (29%), Positives = 177/342 (51%), Gaps = 17/342 (4%) Query: 2 NMEEIVALSVKHNVSDLHL---CSAWPARWRIRGRM----EAAPFDTPDVEELLREWLDD 54 ++ + V +++ + SD+ L +R+ G E +D + + L+ L++ Sbjct: 116 HVNQFVRRTLELDASDMDLGGRACDGNVWYRVDGEKRREDEFGAYDPLETDILVLNLLNE 175 Query: 55 DQRAILLENGQLDFAVSL-------AENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLG 107 Q LLE G DF+ L +R R +A++ +L +R + LE LG Sbjct: 176 QQTQQLLEAGATDFSYRLEDVTGEDGRPRRFRATAYSDYDHAALNMRAITDEVFALEDLG 235 Query: 108 APTVLPELLKSEN---GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 + + + + GL L+TG TGSGKSTTL A++ N+ H++ + PVEY++ Sbjct: 236 FHEKIQQGMMFRHVRDGLTLITGVTGSGKSTTLDAIIDANNEDFPGHVVVIAQPVEYMHK 295 Query: 165 SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLAT 224 ++C+++ RE+G TF +G+ ALR+DPD++++GE+RD TI+ AL ++GH V +T Sbjct: 296 PKQCIVRHREVGKDVATFKTGITQALRQDPDIVVIGEMRDPATIQAALEITDSGHKVFST 355 Query: 225 LHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTP 284 LHT A + ++R+V P +E+ VR++LA LR V+SQ+L GR E+L Sbjct: 356 LHTSSAMETIDRIVAEVPPEEQQRVRHRLADVLRCVISQQLLPKIGGGRQMAKEVLWVDS 415 Query: 285 AVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + I+ ++ ++ G G T +Q V + ++ Sbjct: 416 SARAAIKNDNVGEVYQMMWEGGNQGQTTLEQDLYRLVRKKKI 457 >UniRef50_B1ZZG0 Type II secretion system protein E n=4 Tax=Verrucomicrobia RepID=B1ZZG0_OPITP Length = 550 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 102/324 (31%), Positives = 159/324 (49%), Gaps = 32/324 (9%) Query: 3 MEEIVALSVKHNVSDLH---LCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 ++ I+A +V+ SD+H L + R+RI G + ++ + + Sbjct: 163 VQSIIAQAVRRRASDIHWEPLERRFRVRYRIDGVLVEVENPPKRLQLAVVSRIKIMANIS 222 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTV- 111 L ++G++ + + LR S HG S+ +R+L + L +LG Sbjct: 223 IAEKRLPQDGRIAITID-GQALDLRVSTLPTAHGESVVMRILDKASLRRGLPELGFAADD 281 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LL +G++LVTG TGSGK+TTL A + LN D ++T+EDP+EY Sbjct: 282 QARFERLLALPDGMVLVTGPTGSGKTTTLYACLQRLN-LPDRKLITVEDPIEYQLTGINQ 340 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + E G+ TFA+ LRA LR+ P+++++GE+RD ET +A+ AA TGHLV +TLHT Sbjct: 341 VPVRPEAGV---TFAAALRAILRQAPNIVMIGEIRDLETAEIAIHAALTGHLVFSTLHTN 397 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFE-------LLI 281 A AV RL+D +A +LRAVL+Q+L E +E L Sbjct: 398 DAVGAVTRLIDLGVK------PFLVASALRAVLAQRLVRKTCEKCAHPYEPPTAFLAALN 451 Query: 282 NTPAVGNLIREGKTHQLPHVIQTG 305 PAV + R + P ++TG Sbjct: 452 IPPAVASAARFRRGTGCPACLRTG 475 >UniRef50_B2V6W7 Type II secretion system protein E n=2 Tax=Hydrogenothermaceae RepID=B2V6W7_SULSY Length = 578 Score = 303 bits (776), Expect = 8e-81, Method: Composition-based stats. Identities = 95/381 (24%), Positives = 153/381 (40%), Gaps = 72/381 (18%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQ---- 56 +I+ + K SD+H+ R+RI G + + + Sbjct: 197 NQIIEDAYKKGASDIHIQPTENNLRIRFRIDGDLNDYLVLPKYTADAIIARYKIMANMKL 256 Query: 57 -RAILLENGQLDFAV-SLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVL 112 L ++ ++++ + + N LR S +G L +R+L L +LG Sbjct: 257 DEKRLPQDSRINYNYYNPSINIDLRVSTIPSVYGEDLVMRILDKSNVILDLNKLGFSDEY 316 Query: 113 PEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + G+IL G TGSGK+TTL + + +++ D +LT+EDPVEY Sbjct: 317 LSLYRDSILKPYGIILHVGPTGSGKTTTLYSALKEIDK-PDIKVLTVEDPVEYQLGGS-- 373 Query: 169 LIQQREIGLHC-MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 I Q I TFA +R+ LR DPDVIL+GE+RD ET + A+ A+ TGHLV +TLHT Sbjct: 374 -IVQTNINPAAGYTFAKAIRSFLRHDPDVILVGEIRDLETAKTAVEASLTGHLVFSTLHT 432 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 + + RL +E LA SL + +Q+L Sbjct: 433 NDSVSTITRL------EEMGVETYLLADSLLLICAQRLVKKICPHCKEEYKATKKEKIIL 486 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR + ELL + ++I + + + + + Sbjct: 487 ENAGMEFEENLTLYKGAGCSVCNFTGYKGRTGIHELLKIDDVLKSMIIDKASTE--DMKK 544 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 GM T +Q + +G Sbjct: 545 YALGHGMKTLRQDGLLKALKG 565 >UniRef50_A7GEM1 General secretion pathway protein E n=10 Tax=Clostridium RepID=A7GEM1_CLOBL Length = 509 Score = 302 bits (775), Expect = 8e-81, Method: Composition-based stats. Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 26/279 (9%) Query: 4 EEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLDDDQ---- 56 + I+ +V SD+H+ R+RI G + + + + + Sbjct: 143 DSIIEEAVWRKASDIHIEPFKDFALIRFRIDGILIEFKKISKKIYTSICTRIKIISYMNI 202 Query: 57 -RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTV-- 111 + ++G++ EN R S +G L +R+L L+ LG Sbjct: 203 AEKNIPQDGKIQNNYR--ENNDFRVSTLPTVYGEKLVIRILYKNEKIADLKSLGFLKEDR 260 Query: 112 --LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 + ++LK NGLIL+TG TGSGKSTTL +M+ Y+N + + +I+T+E+PVEY + Sbjct: 261 KNIEKMLKKPNGLILITGPTGSGKSTTLYSMLQYIN-NKEKNIITIEEPVEYTINGINQV 319 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 + +TF GL++ LR+DPD+I++GE+RD ET ++A+ A+ TGHLVL+TLHT G Sbjct: 320 NVDYK---RELTFLKGLKSILRQDPDIIMVGEIRDEETAKVAVRASITGHLVLSTLHTNG 376 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD 268 A +++ RL+D L+ +LR ++SQ+L Sbjct: 377 ALESIIRLLDMKIE------PYILSDALRGIISQRLVRK 409 >UniRef50_A1U404 Type II secretion system protein E n=8 Tax=Gammaproteobacteria RepID=A1U404_MARAV Length = 579 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 161/377 (42%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A +V+ SD+H+ R+R+ G + + + + + D Sbjct: 193 VNNVLAKAVEAGASDVHIEPGEEFFIIRYRVDGVLHSQMTQSASRFPAVASRIKLISGMD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTVL 112 + L ++G++ + + +R S G S+ +RLLP LE LG Sbjct: 253 IAESRLPQDGRISTRLG-GQEMDIRVSTAPCSFGESVVMRLLPKNRESLSLESLGMEPDH 311 Query: 113 PELLKS----ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L++S NG++LVTG TGSGKSTTL + + L ++T+EDPVE+ Sbjct: 312 LKLMRSVLGFSNGIVLVTGPTGSGKSTTLYSGLSELVDGRQ-KLITVEDPVEFQVRGVTQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IG TFA LRA LR+DPD+I++GE+RD ET +A+ +A TGHLVL+TLHT Sbjct: 371 IQANGDIG---YTFARALRAILRQDPDIIMIGEIRDLETAEIAIQSALTGHLVLSTLHTN 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK------------------- 269 A A RLVD +A ++AV +Q+L Sbjct: 428 DALSAFTRLVDMGVE------PYLVAAPVKAVQAQRLVRRACPNCSEPASPPESLWKPLA 481 Query: 270 ----------------------QEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ ++E++ T + L+ + + + + Sbjct: 482 GDWIKNPAFVEPKGCERCHGTGYRGRLGIYEIIPATEELQTLVADN--ADISDLRLWAAR 539 Query: 308 VGMITFQQSYQHRVGEG 324 G Q + G Sbjct: 540 HGHRNLLQDGLIKAARG 556 >UniRef50_A6W755 Type II secretion system protein E n=3 Tax=Actinomycetales RepID=A6W755_KINRD Length = 591 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 107/379 (28%), Positives = 164/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ +V+ SD+HL S R+R+ G + V + + D Sbjct: 213 VNRILSDAVRLRCSDIHLESQRDQLRVRFRVDGLLRDVMSAPKRVAPSVISRIKIISGLD 272 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPT-- 110 + ++G+ V R S HG + +RLL P L LG Sbjct: 273 ISERRIPQDGRTRVVVD-GAAIDCRVSTLPALHGEKIVIRLLTRGDDVPSLPSLGFEPEQ 331 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + L GL+L+TG TGSGK+ TL A + + +I+TLEDPVE Sbjct: 332 LEIFEKALSVPQGLVLITGPTGSGKTNTLYAAIHA-TMSPEKNIITLEDPVEVQLPGITQ 390 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++G MTF++GLR+ LR+DPD++L+GE+RDSET LAL A+ TGHLVL TLHT Sbjct: 391 VQVHAKVG---MTFSAGLRSVLRQDPDIVLIGEVRDSETAELALKASMTGHLVLTTLHTN 447 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RLVD +A SL A ++Q+L Sbjct: 448 SAVGALTRLVDMG------AAPFLVASSLTAAIAQRLVRKPCDSCADGYIPDEDVLAVLD 501 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR A++E+L TP++ ++ T ++ Sbjct: 502 LTIEDILDATPLKGTGCPECGGTGYRGRTAVYEVLDVTPSMRKVLMHDATE--SALLAEA 559 Query: 306 QQVGMITFQQSYQHRVGEG 324 +++GM T +QS + G Sbjct: 560 ERIGMKTLRQSALEKAMRG 578 >UniRef50_B0VJ41 Type IV pilus biogenesis protein PilB n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ41_9BACT Length = 569 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 93/379 (24%), Positives = 163/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + I+ ++K +D+H+ R+R+ G + + L + + Sbjct: 190 INLIINEAIKAGATDIHIEPLTKISRIRYRVDGALREVMTPPIGMHPSLISLVKVMSKLN 249 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 L ++G + ++ ++ +R S G + +RLL +L LG Sbjct: 250 IAERRLPQDGHISLKTAM-KSVDVRVSITPTVLGEKVVMRLLDKGEFGFKLTTLGFEEDD 308 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++++ G+I+V+G TGSGKSTTL A + + ++ +++I+T+EDPVEY Sbjct: 309 MDIFKKIIRRPYGIIIVSGPTGSGKSTTLHAALKEI-ENIESNIITVEDPVEYRLEGVTQ 367 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TF S LR+ LR+DPD++L+GE+RD ET +A+ + TGHLV TLH Sbjct: 368 IETKEQIGL---TFGSALRSVLRQDPDIVLIGEIRDEETADIAIKFSLTGHLVFTTLHAN 424 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + R++D + SL V++Q+L Sbjct: 425 DAPATITRMIDIGIK------PYLVGSSLSLVMAQRLVRKICKYCIKDYIPTEQEIQDAG 478 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR +FELL P + +I EG L + + Sbjct: 479 LTPEEASKINFKIGTGCVHCDNTGYSGREGIFELLTINPEIRRIIYEGGNQDL--IREAA 536 Query: 306 QQVGMITFQQSYQHRVGEG 324 + GM T + ++ +G Sbjct: 537 LRNGMRTLHDAAITKMKKG 555 >UniRef50_Q0AKY1 Type II secretion system protein E n=2 Tax=Proteobacteria RepID=Q0AKY1_MARMM Length = 548 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 113/354 (31%), Positives = 162/354 (45%), Gaps = 47/354 (13%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRM-EAAPFDTPDVEELLREW-----LD 53 ++ +VA + SD+H+ R R+ G + + + T ++ LD Sbjct: 186 LDNLVARATDARASDIHVELQHREAQIRLRVDGVLKDHIAWPTAQALAVISRVKVLAELD 245 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTV 111 +R ++G+ V+ +R S ++G SL LRLL + +E LG Sbjct: 246 IAERRR-PQDGRFSMPVA-GRTIDVRVSVVPGQYGESLVLRLLDPEASLRGIESLGLSQS 303 Query: 112 LPE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + E +L +GLILVTG TGSGK+T+L A + L + ILT+EDP+EY A Sbjct: 304 VSEPVEAMLNMPHGLILVTGPTGSGKTTSLYAFLRRLAS-GERKILTIEDPIEYRLAGVA 362 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 I L TFA+ LRA LR DPDVI++GE+RD+ET R A+ AA TGHLVL+TLHT Sbjct: 363 QSQTNPAIDL---TFANALRAFLRHDPDVIMVGEIRDAETARTAIQAAMTGHLVLSTLHT 419 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ----------------E 271 A A+ RL D LA +L V+ Q+L Sbjct: 420 NDAPSAISRLQDMGIED------FLLAATLVGVVGQRLVRRTCPTCEGAGCQRCEESGFR 473 Query: 272 GRVALFELLINTPAVGNLIREG-KTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 GR+ + E A+ IREG + L V+ ++ G T Q G Sbjct: 474 GRLPVAEAFRVNEAIRASIREGARETGLEPVL---KRAGYQTMWQDGLALCKRG 524 >UniRef50_C9A706 Type II/IV secretion system protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A706_ENTCA Length = 534 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 92/377 (24%), Positives = 157/377 (41%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQ--- 56 + ++ +V SD+H R R+ G + ++ + L Sbjct: 152 VNTLLQDAVDRGASDIHFDPQEKGLVVRLRVDGELRTHENLPKSIQTGVTSRLKIISSLD 211 Query: 57 --RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 + ++G+ + LR S HG + +R+L +L++ Sbjct: 212 ITETRVPQDGRAMIR-NGGNVVDLRVSVLPVIHGEKVVIRVLDRSSGIRRLDEFRFEPKV 270 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L +G+ILVTG TGSGKS++L A + LN + +I+T+EDPVE+ Sbjct: 271 LATFKAILHKPHGIILVTGPTGSGKSSSLYAALQELNT-PEINIITVEDPVEFQLQGINQ 329 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +GL TF++GLR+ LR+DP+V+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 330 VAVNSNVGL---TFSAGLRSILRQDPNVVMVGEIRDGETAEIAIRASMTGHLVLSTLHTN 386 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + + RLVD +A +L +L+Q+L Sbjct: 387 DSVSTINRLVDMGVE------PFLVANALEGILAQRLVRTLCSSCKTVGPASDKDKQLFE 440 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR+A+ ELL + +I T+ ++ Q+ Sbjct: 441 SYGITVTELAQPVGCPKCGNTGFKGRMAVQELLTIDAKLRRMITNKATND--QLMDYVQE 498 Query: 308 VGMITFQQSYQHRVGEG 324 M +V +G Sbjct: 499 RKMRFLLDDGLDKVQQG 515 >UniRef50_A1SFQ9 Type II secretion system protein E n=1 Tax=Nocardioides sp. JS614 RepID=A1SFQ9_NOCSJ Length = 563 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 103/382 (26%), Positives = 162/382 (42%), Gaps = 73/382 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ ++ SD+H+ R+RI G + A ++ + L Sbjct: 185 VNLLINQAINDRASDIHIEPTERDMRVRYRIDGVLHDAHRSPKSIQNGVISRLKIMAEMN 244 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ LR + G + R+L + QL + LG Sbjct: 245 IAERRVPQDGRMSVTHQ-GRRIDLRVATLPTVWGEKVVARILDTSNTQLGLDDLGFSNEN 303 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 G+IL TG TGSGKSTTL A + LN+ D +++T+EDPVEY Sbjct: 304 YERYRASYTKPYGMILATGPTGSGKSTTLYATLNLLNR-PDVNVITVEDPVEYRLPGINQ 362 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR+ LR DPD++L+GE+RD ET ++A+ AA TGHLVL+TLHT Sbjct: 363 VQTNAKAGL---TFASALRSILRSDPDIVLIGEIRDHETAQIAVEAALTGHLVLSTLHTN 419 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL++ + +L AVL+Q+L Sbjct: 420 DAPSAVTRLIEMGIE------PFLVGSALDAVLAQRLCRSLCERCKQAYQPDPAELQRIG 473 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNL-IREGKTHQLPHVIQ 303 GR+AL E++ + V L + T ++ + Sbjct: 474 FPWAEGAEVPVLYRHVGCSSCSQTGYRGRMALHEVMTVSEEVSRLAVARASTDEVG---R 530 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 T ++ GM T + +V +GR Sbjct: 531 TAREQGMTTLKSDGWQKVLQGR 552 >UniRef50_C1XWL4 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=4 Tax=Bacteria RepID=C1XWL4_9DEIN Length = 888 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 157/379 (41%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + SD+H+ R R+ G + + + D Sbjct: 510 VNNIIREAYLQEASDIHIEPRQQEILVRIRVDGNLREYMKLPKGAGPAIASRVKIMANLD 569 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 L ++G++ F + + LR S +G + +RLL P++EQLG Sbjct: 570 IAERRLPQDGRVRFR-ERSIDLDLRLSTLPTVYGEKVVMRLLRKATEIPEIEQLGFAPGV 628 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++ G+ L+TG TGSGKS T +++ + + + T+EDPVEY Sbjct: 629 FQRFEDVISKPYGIFLITGPTGSGKSFTTFSILKRIAT-PEKNTTTIEDPVEYEIPGINQ 687 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 GL TFA LR+ LR+DPD+I++GE+RD+ET ++A AA TGHLV+ATLHT Sbjct: 688 TQVNPVAGL---TFAKALRSFLRQDPDIIMVGEIRDAETAKIATEAALTGHLVIATLHTN 744 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV RL +E ++ +L VL+Q+L Sbjct: 745 DAAGAVTRL------EEMGVELFNISAALVGVLAQRLVRRVCENCKTEVEPDPHILRRLG 798 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR A+ EL++ + I GK+ V Sbjct: 799 MSEADIRGKKLYKGVGCERCNGTGYKGRAAIHELMVINEEIRAAIVAGKSA--SEVKDIA 856 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ GM T ++ + G Sbjct: 857 RKTGMSTLREDGIQKAFMG 875 >UniRef50_B4D852 Type II secretion system protein E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D852_9BACT Length = 569 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 107/382 (28%), Positives = 176/382 (46%), Gaps = 73/382 (19%) Query: 3 MEEIVALSVKHNVSDLH---LCSAWPARWRIRGRMEAAPFD-------TPDVEEL-LREW 51 + +I+ +++ +D+H L + R+RI G + + + L + Sbjct: 182 VNQIIREAIQERATDIHVEPLENDLRIRYRIDGILHEVAVPGQLRVLQSAIISRLKVMAH 241 Query: 52 LDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH---CPQLEQLGA 108 +D +R L ++G+++ + +R S +G S++LRLL + L++LG Sbjct: 242 MDIAERR-LPQDGRINLN-THQGAIDVRVSTIPTVNGESISLRLLSRNESLSFALDRLGM 299 Query: 109 P----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 ++ LL+ NG+ILVTG TGSGKST+L + +N + I+T+E+PVEY A Sbjct: 300 SDAQMKMIRALLQEPNGIILVTGPTGSGKSTSLYCFLSSINAVS-RRIITIEEPVEYRLA 358 Query: 165 SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLAT 224 + + EIGL TFA+GLRA LR+DP+++++GE+RD ET +A+ AA TGHLV +T Sbjct: 359 GVSQIEVKSEIGL---TFANGLRAILRQDPNIVMVGEIRDFETAEIAIRAAMTGHLVFST 415 Query: 225 LHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV----------------- 267 LHT A + RL+D LA +R L+Q+L Sbjct: 416 LHTNDAVSGITRLLDMGIE------PFLLASVVRCFLAQRLVRTICPDCKAEASYLPEYL 469 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GR+A++E+ + + LI + + + Q Sbjct: 470 REINAPIPADSKLYRGKGCEHCRQTGYRGRMAIYEVCVVNENLRRLIIRKEPGSV--LKQ 527 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 GM T +Q RV G+ Sbjct: 528 RAAMDGMDTLRQDGWRRVLLGQ 549 >UniRef50_A1TTE0 Type IV-A pilus assembly ATPase PilB n=3 Tax=Comamonadaceae RepID=A1TTE0_ACIAC Length = 578 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 89/380 (23%), Positives = 159/380 (41%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR-- 57 + +++ + SDLH + R+RI G + ++E L + R Sbjct: 199 LHKMLLDAFNMRASDLHFEPYEHQYRVRFRIDGELREIASPPIAIKEKLASRIKVISRLD 258 Query: 58 ---AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ V R S G + +R+L +L + LG Sbjct: 259 ISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVIRILDPSSAKLGIDALGYEPEE 318 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + G+ILVTG TGSGK+ +L + LN+ +I T EDP E Sbjct: 319 KERLLHAIGRPYGMILVTGPTGSGKTVSLYTCLNLLNK-PGVNIATAEDPSEINLPGVNQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA+ L++ LR+DPD+I++GE+RD ET +++ AA+TGHLVL+TLHT Sbjct: 378 VNVNEKAGL---TFATALKSFLRQDPDIIMVGEIRDLETADISIKAAQTGHLVLSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A + R+ + A +A S+ + +Q+L Sbjct: 435 DAPTTLTRMRNMGIA------PFNIASSVILITAQRLARRLCPACKAPADIPHETLLEAG 488 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLI-REGKTHQLPHVIQT 304 +GRV +++++ + + +I R+G ++ + Sbjct: 489 YREEDIDGSWVTYRPVGCSACNNGYKGRVGIYQVMPVSEEIQRIILRDGSALEIA---EQ 545 Query: 305 GQQVGMITFQQSYQHRVGEG 324 + G+ + ++S H+ G Sbjct: 546 AKAEGVRSLRESGLHKARMG 565 >UniRef50_A5N7G6 ExeE2 n=3 Tax=Clostridium RepID=A5N7G6_CLOK5 Length = 498 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 70/376 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ ++ SDLH+ + R RI G + +V LL + Sbjct: 127 INYIIDKAIDERASDLHIEPFQSSVTIRMRIDGIIGEYIKIPLNVYPLLCTRIKIMADMN 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA---- 108 + ++G++ + V N LR S +G + +R+L L LG Sbjct: 187 IAEKRMPQDGKIKY-VKQKLNYDLRVSTLPTIYGEKIVIRILYKDEGIKHLNTLGFLKQD 245 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++ +GLIL G TGSGKSTTL +++ +++ + +I+++EDPVEY + Sbjct: 246 EKKIRNMISKGHGLILAVGPTGSGKSTTLYSILNTMDK-YEKNIVSIEDPVEYTVENINQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL FA GLR+ LR+DPDVI+LGE+RD ET +A+ AA TGHLV++TLHT Sbjct: 305 VNVNSKIGLD---FAKGLRSILRQDPDVIMLGEIRDEETAHIAIRAAVTGHLVISTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A +++ RL D A+ + +L ++SQ+L Sbjct: 362 DALESIVRLKDMGIAE------YFIEDALIGIISQRLVRKICPYCKTKYVPSSREVKELN 415 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREGKT-HQLPHVIQTGQQV 308 +GR +E++ I +G + + ++ + +Q Sbjct: 416 LLSTDVLYRGEGCIKCNYTGYKGRTVAYEIVH-----SGHIEKGCLKNNIANIREKVKQS 470 Query: 309 GMITFQQSYQHRVGEG 324 M++ +Q+ + G Sbjct: 471 NMVSLKQNCIELIKSG 486 >UniRef50_Q97HA7 General secretion pathway protein E, ATPase n=1 Tax=Clostridium acetobutylicum RepID=Q97HA7_CLOAB Length = 491 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 70/376 (18%) Query: 1 MNMEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAP------FDTPDVEELLREW 51 + ++ I+ L++ N SD+H+ R RI G ++ +++ + + Sbjct: 120 LLVDSIIDLALSKNGSDIHIEPFKDIAVVRIRIDGVLKKVMELPLKAYESVCIRIKIMAD 179 Query: 52 LDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGA--- 108 ++ + ++G++ + +N R S+ G + +R+L + L Sbjct: 180 MNIVIKKA-PQDGRMYY-----KNCDFRVSSIPTIFGEKIVIRVLYKNNAALSFSDITGV 233 Query: 109 -PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + LL+ NG++L+TG TGSGKSTTL + + LN + +I+T+EDPVE + Sbjct: 234 NENEVAGLLEKPNGIVLLTGPTGSGKSTTLYSAISKLNSE-EKNIVTIEDPVEMIIEGIN 292 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + E G+ TF+SGL+ LR+DPD+I++GE+RD T +A+ AA TGHLVL+TLHT Sbjct: 293 QINVNYEAGI---TFSSGLKNILRQDPDIIMVGEIRDETTAEIAVRAAITGHLVLSTLHT 349 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A A+ RL D + + +L V++Q+L Sbjct: 350 NDAFSAINRLCDMGIQ------KYLILDALNGVIAQRLLRTICVHCKEEYKPNDYERKVL 403 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GR A+FE++ V ++I E K + + Q Sbjct: 404 GLNSSEVLYKGRGCSKCDFSGYHGRKAVFEIISINDDVRDIIAESKGADC--IKRYFIQS 461 Query: 309 GMITFQQSYQHRVGEG 324 G+ T ++S V G Sbjct: 462 GVKTLKKSGMELVKRG 477 >UniRef50_A8PPD5 Type IV pilus assembly protein TapB n=1 Tax=Rickettsiella grylli RepID=A8PPD5_9COXI Length = 586 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 66/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +++ N SD+HL R+RI G + ++ + L D Sbjct: 210 VYQLLLDAIRKNASDVHLEPLQGRLTIRFRIDGLLYSSAILPKPFMSRVITRLKIMAQLD 269 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 + ++G+ + R S HG L +R+L S+ ++++LG Sbjct: 270 IAERRIPQDGRFQVKDKFDRDVDCRLSTCPTIHGEKLVIRILDSNQMLLKIDKLGMNEKQ 329 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LKS +G+ILVTG TGSGK+ TL + +L +H+ +I T+E+P+E + Sbjct: 330 KNEFITALKSPHGMILVTGPTGSGKTITLYTALNFL-KHSTVNISTVENPIEIILPGINQ 388 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + I +TFA LRA LR+DPD+I++GE+RD ET + + AA+TGHLVL+TLHT Sbjct: 389 VNINPAI---HLTFACVLRAFLRQDPDIIMVGEMRDQETAEIGIKAAQTGHLVLSTLHTN 445 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A +++ RL + + + S+ +++Q+L Sbjct: 446 SAIESLIRL------ENMNIPTYNIVASVNLIIAQRLVRRLCDRCKIETPLPKEFIRKLN 499 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +GR +FE+L T + I K + + + + ++ Sbjct: 500 LITNSKIKTFAAKGCDHCTEGYKGRTGIFEILTLTEKIKKGIL--KKNSMLEIKKMAEKQ 557 Query: 309 GMITFQQSYQHRVGEGRL 326 GM T S ++ +G + Sbjct: 558 GMQTLYSSALEKLKQGVI 575 >UniRef50_C1AA14 Type IV pilus assembly protein PilB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA14_GEMAT Length = 634 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 85/280 (30%), Positives = 137/280 (48%), Gaps = 25/280 (8%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ +V SD+H R+RI G ++ + L Sbjct: 221 INAILGDAVHKGASDIHFECFEHELRVRYRIDGALQEVMKPPMKMRAALISRFKIMSSLN 280 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPT-- 110 + ++G++ + + R S G + LR+L LE + G Sbjct: 281 IAERRVPQDGRIKLKIG-RKVIDFRVSTLPTLFGEKVVLRILDKGNLTLELDKFGIEPRA 339 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L E + + G++LVTG TGSGK+TTL + + +N + D +I+T EDPVEY Sbjct: 340 ERELMEAISNPYGMVLVTGPTGSGKTTTLYSALSKIN-NLDTNIMTAEDPVEYNLFGINQ 398 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + EIG M+FA+ L+A LR+DP+VI++GE+RD ET +A+ AA TGH+V++TLHT Sbjct: 399 VQVRTEIG---MSFAAALKAFLRQDPNVIMVGEIRDLETGGIAVKAALTGHMVMSTLHTN 455 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD 268 A + + RL+D +A +L +L+Q+L Sbjct: 456 SAPETIVRLLDMGLE------PFNVASALNLILAQRLVRR 489 >UniRef50_Q3SKS0 Pilus assembly pathway ATPase PilB n=3 Tax=Proteobacteria RepID=Q3SKS0_THIDA Length = 577 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 101/280 (36%), Positives = 144/280 (51%), Gaps = 25/280 (8%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ + +++ N SD+H+ R+RI G + + L L D Sbjct: 197 LQTLFEDALQVNASDVHIEPQEKQLMIRFRIDGVLHRQTEADLRIAPALALRLKIVSGLD 256 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTVL 112 L ++G+ V +R S ++G S+ +RLL + P L+ LG P + Sbjct: 257 ISEKRLPQDGRFAVKVR-GRTVDVRLSTMPTQYGESVVMRLLSQGDNAPTLDTLGMPPAM 315 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E +L NGL+LVTG TGSGK+TTL A +G LN I+T+EDPVEY Sbjct: 316 LERFRAILHRPNGLVLVTGPTGSGKTTTLYAALGELN-DPGTKIITVEDPVEYRLPGVNQ 374 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L +FA LRA LR+DPDVIL+GE+RD ET ++AL AA TGHLVL+TLHT Sbjct: 375 VQANDKIDL---SFARVLRAMLRQDPDVILVGEMRDPETAQIALRAAMTGHLVLSTLHTN 431 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD 268 AA RL+D +A S++ VL+Q+L Sbjct: 432 DAASTPVRLLDMGVPS------FMVATSVQGVLAQRLLRK 465 >UniRef50_C6Y3P1 Type II secretion system protein E n=2 Tax=Sphingobacteriaceae RepID=C6Y3P1_PEDHD Length = 477 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 172/379 (45%), Gaps = 72/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRM-EAAPFDTPDVEELLREW-----LD 53 +E ++A + + SD+H+ + R RI G + E + ++ LD Sbjct: 103 LENLIAEAKRLKSSDIHIETYEEKCRVRIRIDGMLIERYLLSRLEYPAIINRIKILANLD 162 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPT- 110 ++ L ++G+++F + + +R S +G + LRLL + ++ LG Sbjct: 163 IAEKR-LPQDGRINFKTAQHQ-FDIRVSVLPTLYGEKVVLRLLNNDATNIDLYTLGFAEG 220 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 E +K NG++L++G TGSGK+TTL A + LN++ +ILT+EDP+EY Sbjct: 221 DLNNYLEGVKRPNGIVLISGPTGSGKTTTLYATLKLLNKNT-RNILTIEDPIEYTLDGIN 279 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + IGL TFA+ LR LR+DPDVI++GE+RD ET +A+ AA TGHLVL+T+HT Sbjct: 280 QVQLKENIGL---TFAAALRTFLRQDPDVIMVGEIRDPETANMAIRAALTGHLVLSTIHT 336 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A + RL+D +A +L ++Q+L Sbjct: 337 NSAWGTISRLMDMGIP------PFLVANTLNTSVAQRLVRLLCPHCKTQSSMEHSLYPKS 390 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR A++E++ + I+ G +Q P + + Sbjct: 391 FNPPEKVDVHWMAKGCDQCYFTGYKGRKAVYEVIPLDQELAFQIKAG--NQQPEAL--LK 446 Query: 307 QVGMITFQQSYQHRVGEGR 325 + G+ T ++ G Sbjct: 447 ERGIYTIGENAFALFAHGH 465 >UniRef50_P31703 General secretion pathway protein E n=26 Tax=Proteobacteria RepID=GSPE_PECCC Length = 498 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 107/375 (28%), Positives = 163/375 (43%), Gaps = 67/375 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ ++K+ SD+H+ + R+R+ G + + LL + D Sbjct: 124 INAMLTEAIKNKASDIHIETYERYLLIRFRVDGVLREILRPQRKLASLLVSRIKVMAKLD 183 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 + ++G++ V +R S +G + LRLL + LE LG Sbjct: 184 IAEKRVPQDGRMALRVG-GRAIDVRVSTLPSNYGERVVLRLLDKNSVKLDLELLGMSERN 242 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L L+ +G+ILVTG TGSGKSTTL A + LN + +I+T+EDP+EY Sbjct: 243 RQLLDSLIHRPHGIILVTGPTGSGKSTTLYAALSRLNAS-ERNIMTVEDPIEYELEGIGQ 301 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 ++ MTFA GLRA LR+DPDV+L+GE+RD ET ++A+ A+ TGHLVL+TLHT Sbjct: 302 TQVNTKVD---MTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTN 358 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL D L+ SL VL+Q+L Sbjct: 359 SALGALSRLQDMGVE------PFLLSTSLLGVLAQRLVRTLCSDCSQPQPVDPVQAEQMG 412 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR+ + EL++ V I I G + Sbjct: 413 IAPGTLLHNPVGCPQCSFTGYRGRIGIHELVLINDDVRAAIHRSDGEMAIAQILGGSRT- 471 Query: 310 MITFQQSYQHRVGEG 324 T +Q ++V G Sbjct: 472 --TIRQDGLNKVLAG 484 >UniRef50_C6Q9T1 Type II secretion system protein E n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9T1_9RHIZ Length = 554 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 102/378 (26%), Positives = 156/378 (41%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + +++ +V +D+H+ R R+ G + + + + + Sbjct: 176 VNQMIQNAVHARATDIHIEPFDGHVAIRIRVDGMLRDVTAPPAQMAKAIVSRVKILSGLN 235 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGA---- 108 L ++G+ ++ LR + HG ++A+RLL + LG Sbjct: 236 IAERRLPQDGRARIRIN-EHRLDLRIATIPTVHGEAVAIRLLDNVRRMLDFAPLGFCAID 294 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + L + GL+LVTG TGSGK+TTLA + LN+ ILT+EDP+EY Sbjct: 295 EAEIRKHLSAPYGLMLVTGPTGSGKTTTLATALSLLNE-GHRKILTIEDPIEYELDGINQ 353 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL +FA LR+ LR DPDV+++GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 354 TQAKPSIGL---SFADALRSFLRHDPDVLMVGEMRDGETASIAIHAALTGHLVLSTLHTN 410 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A+ RL+D LA SLR V+ Q+L Sbjct: 411 TAAGAIPRLLDMGIDS------FLLASSLRGVVGQRLVRVLCEHCKQPSDEVLSLGRAHG 464 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 GRV + E+L + LI+ L + Sbjct: 465 IDAVPEGSRHWRAVGCERCFGTGYSGRVVISEVLSVDDEIRELIQPNAQPALIEA--AAR 522 Query: 307 QVGMITFQQSYQHRVGEG 324 + GM T + G Sbjct: 523 RKGMTTMIMDGLAKCLSG 540 >UniRef50_C4SWB4 Type II secretion system protein n=9 Tax=Enterobacteriaceae RepID=C4SWB4_YERIN Length = 512 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 160/372 (43%), Gaps = 63/372 (16%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + L+++ SD+H + R+RI G + +P T ++ + L + Sbjct: 133 ITQTLRLAIQKRASDIHFEPYQHHYRIRFRIDGVLHESPAPTAELASRISSCLKVMAKLN 192 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP-SHCPQLEQLGA----P 109 L ++GQL ++ +R + + G + LR+L P L LG Sbjct: 193 IAEKRLPQDGQLALVLN-GTRYSIRIATLPVQFGEKVVLRILNIHQQPTLANLGLNTIAH 251 Query: 110 TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 L L + GL+LVTG TGSGK+ TL + LNQ +I ++EDP+E Sbjct: 252 QQLTRALSAPQGLVLVTGPTGSGKTVTLYCSLDQLNQ-PQRNICSVEDPIEIQADGINQT 310 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 IGL F+ LRA LR+DPDVI+LGE+RD+ET +A+ AA TGHLVL+TLHT Sbjct: 311 QTNNRIGLD---FSCVLRAMLRQDPDVIMLGEIRDNETAEIAVKAALTGHLVLSTLHTNS 367 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 ++ + RL R+ +A SL V++Q+L Sbjct: 368 TSETLIRLTQMGIE------RHLIASSLTLVIAQRLVRRLCLHCRQASPSLFQAPAGVWP 421 Query: 269 ----------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMIT 312 GR ++E+L TP + + + + + Q Q+ +T Sbjct: 422 SPLQHYLAVGCEHCCAGYYGRTGIYEMLSVTPQIQHALLSNVSP--AKLTQIAQKQEQVT 479 Query: 313 FQQSYQHRVGEG 324 + V G Sbjct: 480 LLSAGLALVESG 491 >UniRef50_D1BN08 Type II secretion system protein E n=3 Tax=Veillonella RepID=D1BN08_VEIPT Length = 339 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 121/319 (37%), Positives = 186/319 (58%), Gaps = 9/319 (2%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRI-RGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 ++E IV ++++ + +D+HL P R G + T ++ E + Sbjct: 9 SLETIVEMAIQLSSTDIHLQCGQPIYLRHGDGLKATSFMCTTELIEDILRRCGIAS---- 64 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 E LD A S R+R + I LRLL +L+ +L +L ++ + Sbjct: 65 YEWQSLDEACSCCG-VRIRIHLYRANQTICGTLRLLCHQQLKLDDNSEGQLLQKLCEAHD 123 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GL+LV G TGSGKS TLA + Y+NQ + HI+TLEDP+E+ +A ++ LI QR++G Sbjct: 124 GLLLVCGPTGSGKSFTLACCIDYINQTMERHIITLEDPIEFEFAPKKSLIHQRQLGADIN 183 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 T + G+R ALREDPDVI++GELRD ET+ AL AAETGHLV+AT+HT+ A AV R++ Sbjct: 184 TMSDGIRDALREDPDVIMVGELRDRETLEAALHAAETGHLVMATMHTQRAVMAVHRMISL 243 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 FP ++++ VRNQ++ LRAV+ Q+L + + + ++L+NT AV NLIR K Q+ Sbjct: 244 FPGEQQEEVRNQISQVLRAVICQRLL-RWNKKFITIRDILLNTHAVANLIRTRKEPQIIS 302 Query: 301 VIQTGQQVGMITFQQSYQH 319 + +T Q+ M T + + + Sbjct: 303 IQET--QLPMKTLEMAVRD 319 >UniRef50_B0MQV8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MQV8_9FIRM Length = 563 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 100/379 (26%), Positives = 163/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + IV S + N SD+H+ R R+ G + P L + Sbjct: 184 VNTIVETSFRMNASDIHIEPFKDRTRIRLRVDGELIEQMKVKPAAHNSLITRIKILGGMN 243 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL---PSHCPQLEQLGAP-- 109 + +G+ + N +R S +G +RLL ++ LG Sbjct: 244 IAEKRIPLDGRFGMTID-GVNLDVRVSTIPTVYGEKCVIRLLSTADEKTRKITDLGMTLY 302 Query: 110 --TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + ++++ +G++LVTG TGSGKSTTL A +G L++ + +I+T+EDP E Sbjct: 303 NYEMFKQIIRCPHGVMLVTGPTGSGKSTTLYATLGELSK-PNVNIVTVEDPCEKKIDGVN 361 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFA+ LR+ LR+DPD++++GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 362 QVQINAKAGL---TFAAALRSILRQDPDIVMVGEIRDGETADIAIRAAITGHLVLSTLHT 418 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 AA + RLVD A +A SL V++Q+L Sbjct: 419 NDAASTILRLVDMGVA------PYMVASSLVGVIAQRLVKLLCPECKEKVMLTDPADLRL 472 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR A+ E+++++ + LI G T + + Sbjct: 473 VGKTEPVEICKAHYGGCRSCHNTGYKGRTAIHEIIVSSNDIKELISSGATAE--QIGAQA 530 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ G + + V G Sbjct: 531 EKNGTKLLRSNVTDMVLAG 549 >UniRef50_D1RBB2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RBB2_9CHLA Length = 544 Score = 300 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 95/379 (25%), Positives = 154/379 (40%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +++ SD+H R+RI G ++ + + L + D Sbjct: 163 LNLILTEAIQQGASDIHFEPLEDGLRVRYRIDGILQNRHSPAVEFQAQLLTRIKVMAKLD 222 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 L ++G++ + E R S G + LR+L L++LG Sbjct: 223 IAEHRLPQDGRIKLRMGRRE-IDFRVSTVPIAAGERIVLRILDKGNVILGLDKLGMLPAV 281 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+ G++LVTG TGSGK+T+L + + + + +I+T+EDPVEY Sbjct: 282 LEEFKRLIALPEGIVLVTGPTGSGKTTSLYSAIFEMYSE-ETNIMTIEDPVEYNLKGIAQ 340 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +I L FA+GLR LR+DPD+I++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 341 IGVRHKIKLD---FATGLRHILRQDPDIIMIGEIRDLETAEIAIQASLTGHLVLSTLHTN 397 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RLVD L+ ++ V +Q+L Sbjct: 398 DAPSSITRLVDMGIE------PYLLSSTIVGVCAQRLVRRICPSCKTAYKPTDRELASLG 451 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR L+EL+ A+ I K+ + Sbjct: 452 LQRDELTDGNLFVGEGCSACYGTGYRGRHGLYELMSINNAIKKQIV--KSADAVEMRDVA 509 Query: 306 QQVGMITFQQSYQHRVGEG 324 GMI +G Sbjct: 510 LNTGMIGLLNHGAELAKKG 528 >UniRef50_C8W1Q1 Type II secretion system protein E n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1Q1_DESAS Length = 527 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 97/379 (25%), Positives = 164/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 +E I+ + SD+H+ R R+ G + ++ L + D Sbjct: 147 LEYILYFAATDKASDIHIEPQEKHVRVRQRLDGMLREMQIFPLAIKLSLISRIKILSQLD 206 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT-- 110 L ++G++ V+ ++ LR S G LR L L LG Sbjct: 207 IAEKRLPQDGRIPIMVN-GQHIDLRISTIPTITGEKCVLRFLYKDHKVIDLNGLGFTEYN 265 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++ +G++L+TG TGSGK+TT+ A + ++ + + +T+EDPVEY Sbjct: 266 LDRFHRIIRKPHGMVLLTGPTGSGKTTTMYAALTEIST-VEKNAITIEDPVEYSLTGVNQ 324 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL TFA+GLR+ LR+DPD+I++GE+RD ET +A+ AA TGHLVL+T+HT+ Sbjct: 325 IQVNPVAGL---TFAAGLRSILRQDPDIIMVGEIRDQETAEIAVRAATTGHLVLSTMHTK 381 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 ++ AV RL+D +A S+ VL+Q+L Sbjct: 382 DSSGAVIRLIDMGIE------PYLVASSVSGVLAQRLVRVLCPQCRVKYELHLSEQEKHM 435 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + E+L + ++ LI + + V + G Sbjct: 436 WGIEDKDAVVLFRESGCESCNFTGYRGRTCISEVLPLSRSIKKLI--NRQYSEDDVREQG 493 Query: 306 QQVGMITFQQSYQHRVGEG 324 + GM+T + ++ +G Sbjct: 494 LREGMLTLMKDGINKALQG 512 >UniRef50_C8X3E6 Type II secretion system protein E n=2 Tax=Desulfovibrionales RepID=C8X3E6_DESRD Length = 785 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 108/392 (27%), Positives = 162/392 (41%), Gaps = 83/392 (21%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP-----ARWRIRG------RMEAAPFDTPDVEELLREW 51 + ++ + K SD+H+ R R+ G + + Sbjct: 393 VNSLLIEAWKRQASDIHIEPDSRNRSCTIRLRVDGTCHEFRKFRIGLARPLVSRVKIMAH 452 Query: 52 LDDDQRAILLENGQLDFAV-SLAENQRLRGSAFAQRHG-ISLALRLLPSHCP-QLEQLGA 108 LD +R L ++G++ + + R + G + +R+L S P LEQLG Sbjct: 453 LDIAERR-LPQDGKIKLKLPGMNTVVEYRVATLPTVDGQEDVVMRVLSSGKPLPLEQLGL 511 Query: 109 P----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 ++ GL+LV G TGSGK+TTL + V Y+N D I T EDPVE Sbjct: 512 HSGVLEAFKRMVYRPYGLLLVVGPTGSGKTTTLHSAVSYINSS-DRKIWTAEDPVEITQT 570 Query: 165 SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLAT 224 R L Q +IGL TFA+ LR+ LR DPDVI++GE+RD ET + + A+ TGHLV +T Sbjct: 571 GLRQLQVQPKIGL---TFAAALRSFLRADPDVIMIGEMRDEETAHIGVEASLTGHLVFST 627 Query: 225 LHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD---------------- 268 LHT A + + RL+D E DP A SL VL+Q+L Sbjct: 628 LHTNSAPETITRLLD----MELDPF--NFADSLLCVLAQRLVKTLCPRCKKPYTPSAEEI 681 Query: 269 ------------------------------------KQEGRVALFELLINTPAVGNLIRE 292 GR + EL++NT + I+ Sbjct: 682 EELRLEFGTNWETAVPEQWRAEPVLYQPHGCSSCLGGYRGRTGIHELMLNTGGLKTCIKH 741 Query: 293 GKTHQLPHVIQTGQQVGMITFQQSYQHRVGEG 324 K + + + GM++ ++ +V EG Sbjct: 742 RKPTE--ELRLQAVEDGMLSLKEDGLLKVIEG 771 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2JJR9 Twitching motility protein n=60 Tax=Bacteria Rep... 437 e-121 UniRef50_C8WRG4 Twitching motility protein n=5 Tax=Bacteria RepI... 436 e-121 UniRef50_A5EV68 Twitching motility protein PilT n=4 Tax=Proteoba... 434 e-120 UniRef50_B5YDI2 Type IV pilus assembly protein PilB n=20 Tax=Bac... 431 e-119 UniRef50_C9RU77 Twitching motility protein n=5 Tax=Bacilli RepID... 430 e-119 UniRef50_P24559 Twitching mobility protein n=63 Tax=Bacteria Rep... 430 e-119 UniRef50_B5YDI3 Type IV pilus retraction protein PilT n=96 Tax=B... 427 e-118 UniRef50_B8D2C7 Tfp pilus assembly protein PilB n=5 Tax=Firmicut... 426 e-118 UniRef50_C7R4E5 Twitching motility protein n=13 Tax=Bacteria Rep... 425 e-117 UniRef50_Q1DAU3 Twitching mobility protein n=44 Tax=Bacteria Rep... 423 e-117 UniRef50_B2V7A9 Type II secretion system protein E n=5 Tax=Aquif... 423 e-117 UniRef50_B1I3G0 Twitching motility protein n=29 Tax=Firmicutes R... 422 e-117 UniRef50_C8X268 Type IV-A pilus assembly ATPase PilB n=1 Tax=Des... 420 e-116 UniRef50_Q1J1R7 Tfp pilus assembly protein, pilus retraction ATP... 420 e-116 UniRef50_D2R472 Twitching motility protein n=8 Tax=Bacteria RepI... 420 e-116 UniRef50_C0QPL5 General secretion pathway protein E (Type II tra... 418 e-115 UniRef50_P52052 Uncharacterized protein yggR n=137 Tax=Enterobac... 417 e-115 UniRef50_C0GQP1 Type II secretion system protein E n=1 Tax=Desul... 416 e-115 UniRef50_C1RHW7 Pilus retraction protein PilT n=3 Tax=Actinobact... 415 e-114 UniRef50_C6BWY7 Type II secretion system protein E n=1 Tax=Desul... 414 e-114 UniRef50_B5YIG2 Type IV-A pilus assembly ATPase PilB n=4 Tax=Bac... 414 e-114 UniRef50_C1AA13 Twitching mobility protein n=1 Tax=Gemmatimonas ... 412 e-114 UniRef50_A6DJN8 General secretory pathway protein E n=1 Tax=Lent... 412 e-114 UniRef50_A5IML1 Twitching motility protein n=11 Tax=Thermotogace... 412 e-113 UniRef50_Q1IRV7 Twitching motility protein n=13 Tax=Bacteria Rep... 411 e-113 UniRef50_A5GHN1 Tfp pilus assembly protein, pilus retraction ATP... 411 e-113 UniRef50_C0QER1 PilB n=10 Tax=Proteobacteria RepID=C0QER1_DESAH 410 e-113 UniRef50_Q01NU4 Type II secretion system protein E (GspE) n=1 Ta... 410 e-113 UniRef50_A7HJC2 Type II secretion system protein E n=11 Tax=Ther... 409 e-113 UniRef50_A6WCF2 Twitching motility protein n=56 Tax=Bacteria Rep... 409 e-113 UniRef50_Q3Z802 Twitching mobility protein n=13 Tax=Bacteria Rep... 408 e-112 UniRef50_B1I3E7 Type II secretion system protein E n=4 Tax=Clost... 408 e-112 UniRef50_B8D2C8 Tfp pilus assembly protein, pilus retraction ATP... 407 e-112 UniRef50_P45792 Type IV pilus assembly protein tapB n=47 Tax=Pro... 407 e-112 UniRef50_A0K2T8 General secretory pathway protein E n=91 Tax=cel... 406 e-112 UniRef50_Q3A779 Tfp pilus assembly protein, pilus retraction ATP... 406 e-112 UniRef50_B8FQB2 Type II secretion system protein E n=4 Tax=Clost... 406 e-112 UniRef50_B0TEE9 Type ii secretion system protein e, putative n=1... 406 e-112 UniRef50_A7A8S6 Putative uncharacterized protein n=2 Tax=Bacteri... 406 e-112 UniRef50_Q2JR70 Twitching mobility protein PilT n=32 Tax=Cyanoba... 406 e-112 UniRef50_Q8DLE1 Twitching mobility protein n=9 Tax=Cyanobacteria... 405 e-112 UniRef50_B2ULW6 Twitching motility protein n=4 Tax=Chlamydiae/Ve... 405 e-111 UniRef50_B7APV7 Putative uncharacterized protein n=2 Tax=Bacteri... 405 e-111 UniRef50_A1SFQ7 Twitching motility protein n=31 Tax=Bacteria Rep... 404 e-111 UniRef50_A8MGF8 Type II secretion system protein E n=1 Tax=Alkal... 404 e-111 UniRef50_B0S8Q3 Type II secretory pathway ATPase, protein E n=7 ... 403 e-111 UniRef50_Q48JN2 General secretion pathway protein GspE n=3 Tax=P... 403 e-111 UniRef50_B9Y805 Putative uncharacterized protein n=1 Tax=Holdema... 403 e-111 UniRef50_C6CY56 Type II secretion system protein E n=3 Tax=Bacil... 403 e-111 UniRef50_D1N174 Type II secretion system protein E n=1 Tax=Victi... 403 e-111 UniRef50_A8UTG3 Type IV pilus assembly protein TapB n=1 Tax=Hydr... 402 e-111 UniRef50_Q06581 Twitching motility protein n=117 Tax=Bacteria Re... 402 e-111 UniRef50_B2A7G1 Type II secretion system protein E n=5 Tax=Firmi... 402 e-111 UniRef50_Q1Q109 Strongly similar to general secretory system typ... 402 e-110 UniRef50_B8FE33 General secretory pathway protein E n=2 Tax=Desu... 402 e-110 UniRef50_B8CZA0 Type II secretion system protein E n=1 Tax=Halot... 401 e-110 UniRef50_A7BSG5 Bacterial type II secretion system protein E n=1... 401 e-110 UniRef50_A3DEG0 Type II secretion system protein E n=5 Tax=Clost... 400 e-110 UniRef50_C4Z588 Type IV pilus assembly protein PilB n=9 Tax=Clos... 400 e-110 UniRef50_Q1Q644 Strongly similar to general secretion pathway pr... 399 e-110 UniRef50_A9BY08 General secretory pathway protein E n=2 Tax=Prot... 399 e-110 UniRef50_B6J5I2 Type 4 pili biogenesis protein (Nuleotide-bindin... 399 e-110 UniRef50_P37093 General secretion pathway protein E n=178 Tax=Pr... 399 e-110 UniRef50_A8Z6P0 Twitching mobility protein n=12 Tax=Epsilonprote... 398 e-109 UniRef50_D2QZA7 Type II secretion system protein E n=1 Tax=Pirel... 398 e-109 UniRef50_A3ZX01 General secretion pathway protein E n=3 Tax=Plan... 398 e-109 UniRef50_B9XM22 Type II secretion system protein E n=1 Tax=bacte... 398 e-109 UniRef50_D2QZD9 Type II secretion system protein E n=4 Tax=Planc... 398 e-109 UniRef50_Q0EY30 Type IV pilus biogenesis protein PilB n=1 Tax=Ma... 398 e-109 UniRef50_Q1IRV6 Type II secretion system protein E n=24 Tax=Bact... 397 e-109 UniRef50_B4U620 Type II secretion system protein E n=3 Tax=Aquif... 397 e-109 UniRef50_B8FQ85 Type II secretion system protein E n=2 Tax=Desul... 397 e-109 UniRef50_A6C2Q8 Type II secretion system protein E n=3 Tax=Planc... 397 e-109 UniRef50_B6BQP9 Type II Secretion PilT n=4 Tax=Proteobacteria Re... 397 e-109 UniRef50_Q1D9E1 General secretory pathway protein E n=17 Tax=Pro... 396 e-109 UniRef50_B2ULL9 Type II secretion system protein E n=2 Tax=Verru... 395 e-109 UniRef50_P45759 Probable general secretion pathway protein E n=3... 395 e-108 UniRef50_C8W152 Twitching motility protein n=2 Tax=Bacteria RepI... 395 e-108 UniRef50_A5F5L4 Type IV pilus assembly protein PilB n=41 Tax=Vib... 395 e-108 UniRef50_Q1V0I1 Type II Secretion PilT n=3 Tax=root RepID=Q1V0I1... 394 e-108 UniRef50_Q181B0 Type IV pilus assembly protein n=5 Tax=Clostridi... 394 e-108 UniRef50_A5D376 Type II secretory pathway, ATPase PulE/tfp pilus... 393 e-108 UniRef50_A0LUI4 Type II secretion system protein E n=4 Tax=Bacte... 393 e-108 UniRef50_B2SSM0 Type IV-A pilus assembly ATPase PilB n=47 Tax=Pr... 393 e-108 UniRef50_B2V7T3 Twitching motility protein n=8 Tax=Bacteria RepI... 393 e-108 UniRef50_Q2SCC2 Tfp pilus assembly protein, ATPase PilU n=58 Tax... 393 e-108 UniRef50_Q3J755 Type II secretion system protein E n=11 Tax=Gamm... 393 e-108 UniRef50_Q0AZI9 Type II secretion system protein E n=1 Tax=Syntr... 392 e-107 UniRef50_A1SFQ9 Type II secretion system protein E n=1 Tax=Nocar... 391 e-107 UniRef50_D2L4Z0 Type II secretion system protein E n=1 Tax=Desul... 391 e-107 UniRef50_D1BGY1 Type II secretion system protein E (GspE) n=3 Ta... 391 e-107 UniRef50_B8FGS0 Twitching motility protein n=1 Tax=Desulfatibaci... 391 e-107 UniRef50_C4ZCI9 Predicted ATPase involved in pili biogenesis, Pi... 391 e-107 UniRef50_P31742 General secretion pathway protein E n=23 Tax=Gam... 390 e-107 UniRef50_C0A4E0 Type II secretion system protein E n=2 Tax=Chlam... 390 e-107 UniRef50_A8ZWZ6 General secretory pathway protein E n=2 Tax=Delt... 390 e-107 UniRef50_B4ST75 Type IV-A pilus assembly ATPase PilB n=56 Tax=Pr... 390 e-107 UniRef50_C1A6T5 Twitching mobility protein n=1 Tax=Gemmatimonas ... 390 e-107 UniRef50_C3WB33 Twitching motility protein n=2 Tax=Fusobacterium... 390 e-107 UniRef50_P37094 Type IV pilus assembly protein pilF n=83 Tax=cel... 389 e-107 UniRef50_A6M148 Type II secretion system protein E n=18 Tax=Clos... 389 e-107 UniRef50_A5FPX9 Twitching motility protein n=4 Tax=Dehalococcoid... 389 e-107 UniRef50_Q00512 General secretion pathway protein E n=10 Tax=Pro... 388 e-106 UniRef50_A8URM8 Putative uncharacterized protein n=3 Tax=Hydroge... 388 e-106 UniRef50_A1U404 Type II secretion system protein E n=8 Tax=Gamma... 388 e-106 UniRef50_C4L4L3 Type II secretion system protein E n=1 Tax=Exigu... 388 e-106 UniRef50_Q1D8Z6 Type II/IV secretion system protein n=10 Tax=Del... 388 e-106 UniRef50_A1TTE0 Type IV-A pilus assembly ATPase PilB n=3 Tax=Com... 388 e-106 UniRef50_B3PF17 General secretion pathway protein E n=8 Tax=Prot... 388 e-106 UniRef50_A8ZYV7 Type II secretion system protein E n=11 Tax=Delt... 388 e-106 UniRef50_Q1K4H3 Twitching motility protein n=1 Tax=Desulfuromona... 388 e-106 UniRef50_D1RBB2 Putative uncharacterized protein n=1 Tax=Parachl... 387 e-106 UniRef50_B4U727 Type II secretion system protein E n=1 Tax=Hydro... 387 e-106 UniRef50_A6Q683 Type II secretion system protein E n=3 Tax=Epsil... 387 e-106 UniRef50_B2SPL0 Tfp pilus assembly protein n=67 Tax=Proteobacter... 387 e-106 UniRef50_A3CR73 PilB-like pili biogenesis ATPase, putative n=2 T... 387 e-106 UniRef50_B2V6W7 Type II secretion system protein E n=2 Tax=Hydro... 387 e-106 UniRef50_C9A706 Type II/IV secretion system protein n=1 Tax=Ente... 386 e-106 UniRef50_C1XWL4 Type II secretory pathway, ATPase PulE/Tfp pilus... 386 e-106 UniRef50_UPI0001C37050 pili biogenesis protein PilT-like ATPase ... 386 e-106 UniRef50_B9XRT3 Type II secretion system protein E n=2 Tax=Verru... 386 e-106 UniRef50_A5GMV2 Twitching motility protein n=3 Tax=Synechococcus... 386 e-106 UniRef50_C0GMA1 Type II secretion system protein E n=1 Tax=Desul... 386 e-106 UniRef50_A0Q077 General secretion pathway protein E n=3 Tax=Clos... 386 e-106 UniRef50_B4D003 Twitching motility protein n=1 Tax=Chthoniobacte... 385 e-106 UniRef50_C8W1Q1 Type II secretion system protein E n=1 Tax=Desul... 385 e-106 UniRef50_C7R600 Type II secretion system protein E n=1 Tax=Kangi... 385 e-105 UniRef50_A1TUR3 General secretory pathway protein E n=5 Tax=Prot... 385 e-105 UniRef50_B6ELG1 Type IV pilus assembly protein PilB n=13 Tax=Gam... 385 e-105 UniRef50_C4XH26 General secretion pathway protein E n=1 Tax=Desu... 385 e-105 UniRef50_B9XBG1 Twitching motility protein n=1 Tax=bacterium Ell... 385 e-105 UniRef50_Q894E4 General secretion pathway protein E n=1 Tax=Clos... 385 e-105 UniRef50_Q180E0 Putative type IV pilus-assembly protein n=8 Tax=... 385 e-105 UniRef50_D1B5J6 Type II secretion system protein E n=3 Tax=Syner... 385 e-105 UniRef50_B9LZ76 Twitching motility protein n=98 Tax=cellular org... 385 e-105 UniRef50_A0RMV4 Twitching motility protein PilT n=6 Tax=Epsilonp... 384 e-105 UniRef50_A1K8L4 Twitching motility protein n=180 Tax=cellular or... 384 e-105 UniRef50_C0D956 Putative uncharacterized protein n=1 Tax=Clostri... 384 e-105 UniRef50_UPI0001746BDE type II secretion system protein E n=3 Ta... 384 e-105 UniRef50_B1ZZG2 Type II secretion system protein E n=8 Tax=Chlam... 384 e-105 UniRef50_A7I2W5 Twitching mobility protein n=7 Tax=Epsilonproteo... 384 e-105 UniRef50_B1ZZ35 Type II secretion system protein E n=4 Tax=Bacte... 383 e-105 UniRef50_B0RYX5 Type II secretory pathway ATPase n=78 Tax=cellul... 383 e-105 UniRef50_B1ZUM1 Type II secretion system protein E n=1 Tax=Opitu... 383 e-105 UniRef50_P31703 General secretion pathway protein E n=26 Tax=Pro... 383 e-105 UniRef50_B0VJ41 Type IV pilus biogenesis protein PilB n=1 Tax=Ca... 383 e-105 UniRef50_B1ZZG0 Type II secretion system protein E n=4 Tax=Verru... 383 e-105 UniRef50_Q2LUL4 General secretion pathway protein E n=4 Tax=Delt... 383 e-105 UniRef50_A8ZU34 Type II secretion system protein E n=4 Tax=Delta... 382 e-105 UniRef50_B3U4T7 Type II secretion system protein E n=1 Tax=Candi... 382 e-105 UniRef50_UPI0001BC4418 general secretion pathway protein E n=1 T... 382 e-105 UniRef50_B8GP69 Type II secretion system protein (Twitching moti... 382 e-105 UniRef50_B0T702 General secretory pathway protein E n=1 Tax=Caul... 382 e-105 UniRef50_C8X3E6 Type II secretion system protein E n=2 Tax=Desul... 382 e-104 UniRef50_A6Q5B1 General secretory pathway protein E n=3 Tax=Epsi... 382 e-104 UniRef50_C3RLB1 Twitching motility protein n=3 Tax=Bacteria RepI... 382 e-104 UniRef50_A7C206 Bacterial type II secretion system protein E n=2... 382 e-104 UniRef50_B4D852 Type II secretion system protein E n=1 Tax=Chtho... 382 e-104 UniRef50_A1WFR3 Type II secretion system protein E (GspE) n=8 Ta... 381 e-104 UniRef50_C4Z961 Predicted ATPase involved in pili biogenesis, Pi... 381 e-104 UniRef50_Q1YQV4 Putative general secretion pathway protein E n=1... 381 e-104 UniRef50_Q15QV0 Type II secretion system protein E n=1 Tax=Pseud... 381 e-104 UniRef50_B2ULW5 Twitching motility protein n=17 Tax=cellular org... 381 e-104 UniRef50_B9JMG1 Pilus assembly secretion ATP-binding protein n=1... 381 e-104 UniRef50_C1SHL1 Type II secretory pathway, ATPase PulE/Tfp pilus... 381 e-104 UniRef50_C0QQ17 Type IV pilus assembly protein TapB n=2 Tax=Bact... 380 e-104 UniRef50_Q3KLC6 General secretion pathway protein E n=14 Tax=Chl... 380 e-104 UniRef50_A6C2Q7 Twitching motility protein n=1 Tax=Planctomyces ... 380 e-104 UniRef50_D2R471 Type II secretion system protein E n=6 Tax=Planc... 380 e-104 UniRef50_B0UAH1 Type II secretion system protein E n=1 Tax=Methy... 380 e-104 UniRef50_C4Z3A4 Twitching motility protein PilT n=1 Tax=Eubacter... 380 e-104 UniRef50_C8W5J2 Type II secretion system protein E n=2 Tax=Clost... 380 e-104 UniRef50_C9RN76 Twitching motility protein n=1 Tax=Fibrobacter s... 380 e-104 UniRef50_Q5P275 Type IV fimbrial biogenesis protein,PilB n=15 Ta... 380 e-104 UniRef50_A2C5L6 General secretion pathway protein E n=7 Tax=Cyan... 380 e-104 UniRef50_C6Q9T1 Type II secretion system protein E n=1 Tax=Hypho... 380 e-104 UniRef50_B8E2U7 Type II secretion system protein E n=2 Tax=Dicty... 380 e-104 UniRef50_C6RE58 Twitching mobility protein n=2 Tax=Campylobacter... 379 e-104 UniRef50_A1AM74 Twitching motility protein n=1 Tax=Pelobacter pr... 379 e-104 UniRef50_Q1Q110 Strongly similar to general secretory system typ... 378 e-103 UniRef50_Q0VM47 Type II secretion system protein, putative n=19 ... 378 e-103 UniRef50_Q1CXQ0 Twitching motility protein PilT n=6 Tax=Deltapro... 378 e-103 UniRef50_A6W755 Type II secretion system protein E n=3 Tax=Actin... 378 e-103 UniRef50_B0MQV8 Putative uncharacterized protein n=2 Tax=Clostri... 378 e-103 UniRef50_A9BA92 Tfp pilus assembly protein, pilus retraction ATP... 378 e-103 UniRef50_Q1AWU6 Type II secretion system protein E n=1 Tax=Rubro... 378 e-103 UniRef50_A6DTL1 Twitching motility protein n=1 Tax=Lentisphaera ... 378 e-103 UniRef50_Q47FA9 Pilus retraction protein PilT n=7 Tax=Betaproteo... 378 e-103 UniRef50_B9Y801 Putative uncharacterized protein n=1 Tax=Holdema... 378 e-103 UniRef50_C1TK45 Type II secretion system protein E (GspE) n=1 Ta... 378 e-103 UniRef50_B1YJT8 Type II secretion system protein E n=5 Tax=Bacil... 378 e-103 UniRef50_D2DXQ5 Twitching motility protein n=1 Tax=uncultured Ve... 377 e-103 UniRef50_A8PPD5 Type IV pilus assembly protein TapB n=1 Tax=Rick... 377 e-103 UniRef50_Q15ZI3 Type II secretion system protein E n=119 Tax=Pro... 376 e-103 UniRef50_A0LPI4 Type II secretion system protein E (GspE) n=2 Ta... 376 e-103 UniRef50_D0LLW4 General secretory pathway protein E n=2 Tax=Nann... 375 e-103 UniRef50_A4XWG4 General secretory pathway protein E n=4 Tax=Bact... 375 e-102 UniRef50_A7IH58 Type II secretion system protein E n=10 Tax=Rhiz... 375 e-102 UniRef50_Q97HA7 General secretion pathway protein E, ATPase n=1 ... 375 e-102 UniRef50_C7QZF3 Twitching motility protein n=1 Tax=Jonesia denit... 374 e-102 UniRef50_A4J3A4 Type II secretion system protein E n=1 Tax=Desul... 374 e-102 UniRef50_Q2SZG5 Type II/IV secretion system protein n=29 Tax=Bur... 374 e-102 UniRef50_B5JLH9 Type II/IV secretion system protein n=1 Tax=Verr... 374 e-102 UniRef50_C9XVR3 Protein transport protein hofB n=6 Tax=Enterobac... 373 e-102 UniRef50_B2A563 Type II secretion system protein E n=5 Tax=cellu... 373 e-102 UniRef50_Q0AKY1 Type II secretion system protein E n=2 Tax=Prote... 373 e-102 UniRef50_C4SWB4 Type II secretion system protein n=9 Tax=Enterob... 373 e-102 UniRef50_B8FI02 Type II secretion system protein E n=1 Tax=Desul... 373 e-102 UniRef50_Q3SKS0 Pilus assembly pathway ATPase PilB n=3 Tax=Prote... 373 e-102 UniRef50_B4CW85 Twitching motility protein n=1 Tax=Chthoniobacte... 373 e-102 UniRef50_Q39PZ3 Response regulator receiver domain protein (CheY... 373 e-102 UniRef50_D2RIL2 Type II secretion system protein E n=2 Tax=Acida... 373 e-102 UniRef50_Q1J1R8 Tfp pilus assembly pathway, ATPase PilB n=7 Tax=... 373 e-102 UniRef50_C7LVR8 Putative phytochrome sensor protein n=1 Tax=Desu... 373 e-102 UniRef50_Q7NH70 PilB protein n=2 Tax=Bacteria RepID=Q7NH70_GLOVI 373 e-102 UniRef50_B1JEY0 Type II secretion system protein E n=6 Tax=Pseud... 372 e-102 UniRef50_C6MUH4 Type II secretion system protein E n=2 Tax=Delta... 372 e-102 UniRef50_A6DAK8 Putative type ii protein secretion e n=1 Tax=Cam... 372 e-102 UniRef50_Q7NM48 General secretion pathway protein E n=1 Tax=Gloe... 372 e-101 UniRef50_A6W7B3 Twitching motility protein n=6 Tax=Bacteria RepI... 371 e-101 UniRef50_Q7UE44 General secretion pathway protein E n=1 Tax=Rhod... 371 e-101 UniRef50_Q30QR7 Type II secretion system protein E n=4 Tax=Epsil... 371 e-101 UniRef50_A5N7G6 ExeE2 n=3 Tax=Clostridium RepID=A5N7G6_CLOK5 371 e-101 UniRef50_B2KC07 Type II secretion system protein E n=1 Tax=Elusi... 371 e-101 UniRef50_Q028H4 Twitching motility protein n=1 Tax=Candidatus So... 371 e-101 UniRef50_C6Y3P1 Type II secretion system protein E n=2 Tax=Sphin... 371 e-101 UniRef50_C8X565 Type II secretion system protein E n=2 Tax=Desul... 370 e-101 UniRef50_C4GX47 General secretion pathway protein E n=42 Tax=Gam... 370 e-101 UniRef50_D1VVV4 Type II secretion system protein E n=1 Tax=Pepto... 370 e-101 UniRef50_P36645 Protein transport protein hofB n=106 Tax=Enterob... 370 e-101 UniRef50_C6BTY4 Type II secretion system protein E n=1 Tax=Desul... 370 e-101 UniRef50_D1Y3N0 Twitching mobility protein n=1 Tax=Pyramidobacte... 370 e-101 UniRef50_B9YDY2 Putative uncharacterized protein n=6 Tax=Bacteri... 370 e-101 UniRef50_B3E8J7 Twitching motility protein n=8 Tax=Desulfuromona... 370 e-101 UniRef50_Q2LRM4 Pili retraction protein n=11 Tax=Bacteria RepID=... 370 e-101 UniRef50_B8GL39 Twitching motility protein n=1 Tax=Thioalkalivib... 370 e-101 UniRef50_A3RPD3 GspE-related protein n=4 Tax=Ralstonia solanacea... 370 e-101 UniRef50_Q1CLY6 Type II secretion system protein n=40 Tax=Entero... 369 e-101 UniRef50_Q0BR98 General secretion pathway protein E n=4 Tax=Acet... 368 e-100 UniRef50_C5B368 General secretion pathway protein E, ATPase comp... 368 e-100 UniRef50_D2R473 Type II secretion system protein E n=6 Tax=Planc... 368 e-100 UniRef50_B1ZN20 Twitching motility protein n=3 Tax=Verrucomicrob... 368 e-100 UniRef50_Q1V0G6 Type II Secretion System PilB n=4 Tax=root RepID... 368 e-100 UniRef50_C2LMJ4 Tfp pilus assembly protein PilT n=2 Tax=Proteus ... 368 e-100 UniRef50_A1TQ20 Twitching motility protein n=3 Tax=Comamonadacea... 368 e-100 UniRef50_C8W151 Type II secretion system protein E n=1 Tax=Desul... 367 e-100 UniRef50_B1ZZ61 Type II secretion system protein E n=1 Tax=Opitu... 367 e-100 UniRef50_C1AA14 Type IV pilus assembly protein PilB n=1 Tax=Gemm... 367 e-100 UniRef50_Q31A47 Type II secretory pathway ATPase PulE/Tfp pilus ... 367 e-100 UniRef50_Q82V45 Bacterial type II secretion system protein E n=1... 366 e-100 Sequences not found previously or not previously below threshold: >UniRef50_Q2JJR9 Twitching motility protein n=60 Tax=Bacteria RepID=Q2JJR9_SYNJB Length = 376 Score = 437 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 146/332 (43%), Positives = 213/332 (64%), Gaps = 8/332 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +E+++ V+ SD+H+ + P +RI G +E P +V+ L+ L+++QR Sbjct: 2 IEDLMEAIVQKGGSDIHISAGLPPYFRINGHLEPTEHEPLSAEEVQRLIFSMLNNNQRKQ 61 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L +N +LD + + R R + + R + A+R L S P +++LG P V E + Sbjct: 62 LEQNWELDCSYGVRGIGRFRVNVYRDRGTYACAMRALASEIPNIDKLGLPDVCKEAARLP 121 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLA+M+ +N+ HILT+EDP+EY+Y R +I QR++G Sbjct: 122 RGLVLVTGPTGSGKSTTLASMIDMINRERAEHILTIEDPIEYIYTPIRSIIHQRQLGEDT 181 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+ LRAA+REDPDVIL+GE+RD ETI+LA+TAAETGHL AT+HT AAQ V+RLVD Sbjct: 182 KSFANALRAAMREDPDVILIGEMRDLETIQLAITAAETGHLCFATVHTSSAAQTVDRLVD 241 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVD-----KQEGRVALFELLINTPAVGNLIREGK 294 FP +++ +R QL+ SL+AV SQ L + GRV + E+++ TPA+ NLIREGK Sbjct: 242 VFPPEQQQQIRVQLSNSLKAVFSQTLARRLNPKPGEPGRVLVQEIMVVTPAIANLIREGK 301 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 T Q+ IQTG + GM T +Q + +G++ Sbjct: 302 TAQIYSAIQTGGKQGMKTLEQDLANLYLQGKI 333 >UniRef50_C8WRG4 Twitching motility protein n=5 Tax=Bacteria RepID=C8WRG4_ALIAD Length = 347 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 156/329 (47%), Positives = 221/329 (67%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA--PFDTPDVEELLREWLDDDQRA 58 + ++EI+AL+ + SD+HL + P +R+ G +E D+E R+ L +++ Sbjct: 2 VQIDEILALAKEKEASDVHLSAGAPVTYRVHGDLEPMGSKLMPVDLEAFARQMLSEERWQ 61 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +E G++DF+ S+ R R +A+ QR IS+A RL+P P +E+L P+V L+ Sbjct: 62 RFMEAGEIDFSYSIPGVARFRVNAYRQRGSISIAARLIPQRIPTMEELNLPSVFKALMNR 121 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAA++ +NQ HI+TLEDP+EYL+ + +I QREIG Sbjct: 122 PYGLVLVTGPTGSGKSTTLAAVLDAINQTQRRHIITLEDPIEYLHTHKLSIIDQREIGQD 181 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 FA LRAALR+DPD++L+GE+RD ETI A+TA+ETGHLV ATLHT A Q VER++ Sbjct: 182 TSGFAPALRAALRQDPDILLVGEMRDLETIATAITASETGHLVFATLHTSDAVQTVERII 241 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP +++ +R QLAG L V+SQ+L + GRVA FE+L+NTPAV NLIR GKTHQ Sbjct: 242 DVFPPEQQGQIRIQLAGVLAGVVSQRLHRTRDGRGRVASFEVLVNTPAVANLIRSGKTHQ 301 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++QTG+Q GMIT + S + V +G++ Sbjct: 302 IGAMMQTGRQFGMITMEMSIRELVQQGKI 330 >UniRef50_A5EV68 Twitching motility protein PilT n=4 Tax=Proteobacteria RepID=A5EV68_DICNV Length = 357 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 145/329 (44%), Positives = 203/329 (61%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQR 57 + +++++ + K SDLHL P RI G + + +++ + D Q Sbjct: 13 LKLDDLLRFAQKQGASDLHLSCGVPPMIRIDGDVRRLNLPPLQNQQMRDMIFGIMTDAQM 72 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E + DF+ + R R + F Q G+ + R +PS LE L AP +++ Sbjct: 73 KSFEEKWEADFSTEIRGVSRFRVNVFQQNRGMGIVFRTIPSKVLSLEDLKAPAKFVDIID 132 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ ++N + HILT+EDP+E+++ S++CL+ QRE+ Sbjct: 133 VPRGLVLVTGPTGSGKSTTLAAMIDHINNNRHEHILTVEDPIEFVHESKKCLVNQREVHR 192 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +F++ LRAALREDPD+IL+GELRD ETIRLALTAAETGHLV TLHT AA+ ++R+ Sbjct: 193 DTQSFSNALRAALREDPDIILVGELRDLETIRLALTAAETGHLVFGTLHTSSAAKTIDRI 252 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 +D FP +EK VR+ L+ SLRAV++Q L GRVA E+L+ T AV NLIRE K Q Sbjct: 253 IDVFPGEEKQLVRSMLSESLRAVIAQTLLKKIGGGRVAAHEVLVGTSAVKNLIREDKVAQ 312 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + IQTG Q GM T Q+ V EG++ Sbjct: 313 IYSTIQTGSQYGMQTLDQALSALVKEGKV 341 >UniRef50_B5YDI2 Type IV pilus assembly protein PilB n=20 Tax=Bacteria RepID=B5YDI2_DICT6 Length = 873 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 107/382 (28%), Positives = 170/382 (44%), Gaps = 72/382 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +VK SD+H+ R+RI G + F + + + D Sbjct: 492 VNSILVDAVKRGASDIHIEPTEKNVRVRFRIDGVLHEIMFIQKRFQAAIVSRIKIMSDMD 551 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 + ++G++ + E R S G + LR+L LE LG Sbjct: 552 ISERRIPQDGRIKANIK-GEVYDFRVSTLPGVFGEKVVLRILGRGSISLSLESLGFSEHN 610 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++LK+ G+ILVTG TGSGKSTTL A + +N D +I+T+EDPVEY Sbjct: 611 YERYLKMLKTPYGIILVTGPTGSGKSTTLYASLNMINS-PDINIITVEDPVEYQLPGIHQ 669 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR+ LR+DPDV+L+GE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 670 VQVNPKAGL---TFASALRSILRQDPDVVLVGEIRDEETARIAIQAALTGHLVLSTLHTN 726 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL+D ++ SL ++Q+L Sbjct: 727 DAPSAVTRLIDMGIE------PFLISSSLLGAVAQRLVRTICPNCKAPYEPTKEEIEAIK 780 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR A+ E+++ + +L+ + + + + + Sbjct: 781 ATLGDIDLSNVTFYKGKGCPKCNGKGYKGRTAIHEIMLMNDEIRDLVLKKASRE--TIKE 838 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 ++ GM+T ++ +V +G Sbjct: 839 VARKHGMVTLREDGMQKVLKGM 860 >UniRef50_C9RU77 Twitching motility protein n=5 Tax=Bacilli RepID=C9RU77_GEOSY Length = 351 Score = 430 bits (1108), Expect = e-119, Method: Composition-based stats. Identities = 145/329 (44%), Positives = 212/329 (64%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRA 58 +E ++ + + SD+HL P +R+ G + A + E++ + + Sbjct: 4 KLEALLRAAFECRASDVHLTVGAPPIFRVNGELRAYGHERLHPEETEQMAKAVIPAPLWQ 63 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 E G+LDF+ +A R R + F QR +SLA+RL+P P LE+LG P VL + + Sbjct: 64 QFQETGELDFSYGIAGVSRFRLNVFKQRSCVSLAVRLIPVRIPTLEELGLPDVLKRIAEK 123 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 +GL+LVTG TGSGKSTTLAAM+ Y+N+ HI+TLEDP+EYL+ + +I QRE+G Sbjct: 124 PHGLVLVTGPTGSGKSTTLAAMIDYMNKTMSKHIITLEDPIEYLHKHGKSIIDQREVGFD 183 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA+GLRAALR+DPDVIL+GE+RD ETI+ A+TAAETGHLVL TLHT A A+ER++ Sbjct: 184 TGSFAAGLRAALRQDPDVILVGEMRDLETIQTAITAAETGHLVLGTLHTASAPAAIERMI 243 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP ++ +R QLA L A+++Q+L ++ + GR A E+L+N AV NLIR K HQ Sbjct: 244 DVFPPAQQAQIRLQLASVLVAIIAQRLFPNRHKTGRTAALEILVNNAAVANLIRNEKEHQ 303 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +++QT + +GM T + S + +GR+ Sbjct: 304 IINIMQTSRSIGMQTMEMSVKELAADGRI 332 >UniRef50_P24559 Twitching mobility protein n=63 Tax=Bacteria RepID=PILT_PSEAE Length = 344 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 149/329 (45%), Positives = 204/329 (62%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQR 57 M++ E++A S K SDLHL + P R+ G + + V L+ + ++D QR Sbjct: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E + DF+ + R R +AF Q G R +PS +E+LG V + Sbjct: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ YLN HILT+EDP+E+++ S++CL+ QRE+ Sbjct: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 + F+ LR+ALREDPD+IL+GE+RD ETIRLALTAAETGHLV TLHT AA+ ++R+ Sbjct: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VD FPA+EK VR+ L+ SL++V+SQ L GRVA E++I TPA+ NLIRE K Q Sbjct: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + IQTG +GM T + V +G + Sbjct: 301 MYSAIQTGGSLGMQTLDMCLKGLVAKGLI 329 >UniRef50_B5YDI3 Type IV pilus retraction protein PilT n=96 Tax=Bacteria RepID=B5YDI3_DICT6 Length = 360 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 149/331 (45%), Positives = 216/331 (65%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQ 56 +++ EI+ +++ SD+H+ S P +RI+G + L+ L ++Q Sbjct: 5 LSIIEILQSALQKEASDVHITSGIPPVFRIKGHLIPQTQYPTLTPQLTYRLIFSLLTEEQ 64 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + L EN +LDF+V ++ R R +AF QR ++ RL+P P +E+L P VL +L Sbjct: 65 KQKLQENKELDFSVGISGEGRFRVNAFWQRGSLAAVFRLIPWKIPTIEELRLPLVLKDLA 124 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GLILVTG TGSGKSTTLA+M+ Y+N + HI+T+EDP+EYL+ ++ ++ QRE+G Sbjct: 125 ALPRGLILVTGPTGSGKSTTLASMIDYINSNFSRHIITIEDPIEYLHTHKKSIVNQREVG 184 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ LR+ALREDPDVIL+GE+RD ET +A+TAAETGHLV+ATLHT A Q++ER Sbjct: 185 SDTYSFANALRSALREDPDVILVGEMRDLETTAIAITAAETGHLVMATLHTVDAVQSIER 244 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 +VD FPA ++ +R QL+G ++ ++SQ+L K GR+ E+LI PAV +LIREGKT Sbjct: 245 IVDQFPAHQQQQIRLQLSGVIQGIISQQLLPRKDGTGRIVATEILIGIPAVRSLIREGKT 304 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ VIQTG + GM T QS V +G + Sbjct: 305 PQIYSVIQTGGRYGMQTMDQSLADLVKKGLI 335 >UniRef50_B8D2C7 Tfp pilus assembly protein PilB n=5 Tax=Firmicutes RepID=B8D2C7_HALOH Length = 558 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 107/374 (28%), Positives = 172/374 (45%), Gaps = 65/374 (17%) Query: 4 EEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDDDQ---- 56 I+ +++ SD+H+ R+R+ G + + L L Sbjct: 187 NLIINQAIQMKASDIHIEPQEDQVRVRYRVDGVLRENMTVPKHSQAALISRLKIIADLDI 246 Query: 57 -RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV-- 111 + ++G+++ VS +R S +G + +RLL Q+EQLG Sbjct: 247 TERRVPQDGRIELNVS-GVKIDMRVSTLPTVYGEKVVIRLLNKEEKLLQIEQLGFSETNL 305 Query: 112 --LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 +L+K +G+ILVTG TGSGKSTTL A + LN + +I+T+EDPVEY + Sbjct: 306 SRFMKLIKQPHGIILVTGPTGSGKSTTLFAALNKLNT-PEKNIITVEDPVEYQLRGINQV 364 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 +GL TFAS LR+ LR+DPD++++GE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 365 QANSRVGL---TFASALRSILRQDPDIVMVGEIRDEETARIAVRAALTGHLVLSTLHTND 421 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 A +V RL+D +A S+ V++Q+L Sbjct: 422 AVSSVTRLIDMGIP------PYLVASSVIGVVAQRLVRRLCTCKEEYVPGPEEMEFLQVN 475 Query: 269 -----------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMI 311 GR+ + E+LI + +I G+ + + + ++ GM+ Sbjct: 476 DIGKLQRPEGCKKCHSTGYRGRLPVHEILIMDRKLREMIVNGEGESV--IKKYARKAGML 533 Query: 312 TFQQSYQHRVGEGR 325 T ++ ++V EG Sbjct: 534 TLKEDGVNKVIEGL 547 >UniRef50_C7R4E5 Twitching motility protein n=13 Tax=Bacteria RepID=C7R4E5_JONDD Length = 566 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 133/332 (40%), Positives = 198/332 (59%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA-----PFDTPDVEELLREWLDDD 55 + +++++ V + SDLHL + R G + P D + + L Sbjct: 191 LILDDVLRDMVVQDASDLHLTNRSRPMIRKAGELTPLEGYDDPLDADALRRSIYTLLTQK 250 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 QR E +LDFA + + R R + + QR + A R++P+ LE LG P + Sbjct: 251 QREQFEEALELDFAYQVPDGARFRVNLYHQRDSVGAAFRVIPTEIKPLEDLGVPPSVGAF 310 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 K GL+LVTG TGSGKSTTLA+++ +N+ HI+T+EDP+E+L+ ++C++ QRE+ Sbjct: 311 AKLARGLVLVTGPTGSGKSTTLASIIDLVNRSRADHIMTVEDPIEFLHEHKKCVVNQREV 370 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +FAS L+ LR+DPD+IL+GELRD ETI +ALTAAETGHLV ATLHT+ AAQ ++ Sbjct: 371 GTDTHSFASALKHVLRQDPDIILVGELRDLETISIALTAAETGHLVFATLHTQDAAQTID 430 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++D FP ++++ +R QLA +++ V+ Q L GRV E+L+ TP + N+IREGK Sbjct: 431 RVIDVFPPEQQEQIRVQLASAIQGVVCQTLCKRADGPGRVVATEVLVATPGIRNMIREGK 490 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 THQ+ +Q G+ GM T Q G + Sbjct: 491 THQIYSSMQAGKNDGMHTMDQHLADLTKRGSI 522 >UniRef50_Q1DAU3 Twitching mobility protein n=44 Tax=Bacteria RepID=Q1DAU3_MYXXD Length = 491 Score = 423 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 130/333 (39%), Positives = 198/333 (59%), Gaps = 7/333 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 M + EI+ ++++ SD+HL + P +R+ G + +V + +++ Q Sbjct: 24 MELNEILQIALRGGASDIHLKAGLPPMFRVDGSLVPLKDGRRLPPEEVARMAFGIMNEFQ 83 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + + ++D A + R R + F QR + LR++P ++ L P +L ++ Sbjct: 84 KEKFKGSNEVDLAYGVPGLGRFRVNVFQQRGTVGAVLRVIPFKVMTIQDLLLPQILAKIC 143 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 E GL+LVTG TGSGKSTTLAAM+ Y+N + +HI+T+EDP+E+L +R ++ QRE+G Sbjct: 144 GEERGLVLVTGTTGSGKSTTLAAMIDYINANETSHIMTIEDPIEFLIRDKRSIVNQREVG 203 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + MTFA L++ALR+DPDVIL+GE+RD ETI AL AAETGHLV++TLHT A + + R Sbjct: 204 VDTMTFAQALKSALRQDPDVILVGEMRDHETIETALHAAETGHLVMSTLHTLDATETINR 263 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE-GK 294 +V +FP ++ VR QLA L+AV+SQ+L GRVA E+L T V +I + + Sbjct: 264 IVSAFPPHQQKQVRLQLASVLKAVVSQRLVPRADGKGRVAAVEVLRVTARVREMIEDKDR 323 Query: 295 THQLPHVIQTGQQ-VGMITFQQSYQHRVGEGRL 326 T ++ I G GM TF QS V +G + Sbjct: 324 TKEIHDAIAQGTDTYGMQTFDQSLMSLVRQGLV 356 >UniRef50_B2V7A9 Type II secretion system protein E n=5 Tax=Aquificales RepID=B2V7A9_SULSY Length = 577 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 103/383 (26%), Positives = 168/383 (43%), Gaps = 73/383 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+A ++ SD+H+ R+R+ G + +++ + + D Sbjct: 196 VNAIIAEAINLGASDIHIEPMEKELKIRFRVDGILRTYKSWPAHIKDAIAARIKILANLD 255 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC---PQLEQLGAPTV 111 L ++G++ F V+ LR S +G + +RL + +LE LG Sbjct: 256 ISEKRLPQDGRIRFRVN-NRKYDLRISTLPTVYGEKIVMRLQDAESYLNVKLENLGFEED 314 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + E + S G++LVTG TGSGK+TTL + + N D +I+T+EDPVE Sbjct: 315 DLKIVREAIYSPWGMVLVTGPTGSGKTTTLYSALMERNTD-DVNIMTVEDPVEVSIPGIN 373 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + EIGL TFA+ LRA LR+DPD+IL+GE+RD ET +A+ AA TGHLV +TLHT Sbjct: 374 QVQVKEEIGL---TFAAALRAFLRQDPDIILVGEIRDRETAEIAVKAALTGHLVFSTLHT 430 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A + RLVD + ++ ++ +++Q+L Sbjct: 431 NDAPSTITRLVDIGVD------KFLVSTAVHTIIAQRLIRKLCNNCKEPANYTPEVLKTF 484 Query: 268 -------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR A+ E+L + I EGKT + Sbjct: 485 GFSDEDIQTGQFFVHHPKGCDKCNGTGYKGRTAVHEILKLDENIRKAINEGKTAD--ELK 542 Query: 303 QTGQQVGMITFQQSYQHRVGEGR 325 + + GM T + ++ +G Sbjct: 543 EIAIKTGMRTLYKDGLIKMKKGL 565 >UniRef50_B1I3G0 Twitching motility protein n=29 Tax=Firmicutes RepID=B1I3G0_DESAP Length = 372 Score = 422 bits (1087), Expect = e-117, Method: Composition-based stats. Identities = 145/330 (43%), Positives = 207/330 (62%), Gaps = 4/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 ++ + ++ ++V+ SDLHL + P RI G + P D+E+L+ L+ R Sbjct: 11 IDFDTLLRITVERQGSDLHLTAGLPPVVRIHGELVPLDYPPLKPSDIEQLVLPRLEPSYR 70 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 AIL E +LDF+ S+A R RG+ QR S LR++P P LE+LG P + L Sbjct: 71 AILDEKWELDFSYSVAGVSRFRGNIMRQRGSYSAVLRVVPYKAPALEELGLPPAVRNLCF 130 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTTLAAM+ +N+ +++T+EDP+E+L+ + +++QRE+G Sbjct: 131 LPRGLVLVTGPTGSGKSTTLAAMIDLINRERRVNVVTVEDPIEFLHRHNKAIVRQREVGS 190 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA LR LR DPDVIL+GE+RD E+I +ALTAAETGHLV +TLHT+ A + R+ Sbjct: 191 DTRSFADALRHVLRADPDVILIGEMRDLESIAIALTAAETGHLVFSTLHTQTAPLTIHRI 250 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 VD F ++D +R QLA SL+ V++Q+L GRVA EL++ +PAV LIREGK H Sbjct: 251 VDVFQEHQRDQIRQQLADSLQGVIAQQLVPRADGKGRVAAVELMLASPAVRALIREGKEH 310 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ VIQT +Q GM T Q+ G++ Sbjct: 311 QMYSVIQTSRQQGMQTMDQALAELYTAGKI 340 >UniRef50_C8X268 Type IV-A pilus assembly ATPase PilB n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X268_DESRD Length = 571 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 104/380 (27%), Positives = 170/380 (44%), Gaps = 69/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +++ SD+H+ R+RI G ++ + + L D Sbjct: 193 VNLIIMDAIRKKASDIHIEPYEELFRVRFRIDGVLQEVMRPPMRLRNAIISRLKIMSHMD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 L ++G++ R S +G + +RLL L+ LG Sbjct: 253 IAERRLPQDGRVKVRTPGGLEVEFRVSVLPLLYGEKVVMRLLDKSSLNLDLRDLGLEDSA 312 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L + G+ILVTG TGSGK+TTL + + LN+ + +I T EDPVEY Sbjct: 313 LEILQRAIIKPYGMILVTGPTGSGKTTTLYSAIMELNKQ-EVNIATAEDPVEYSLEGVNQ 371 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TFA LR+ LR+DPD+IL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 372 VQVRDDIGL---TFAGALRSFLRQDPDIILVGEIRDLETAEIAVKAAMTGHLVLSTLHTN 428 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + + RL++ + +A S+ A+++Q+L Sbjct: 429 DAPRTLTRLMNMGVEE------YLIASSVNAIVAQRLVRKLCPFCKQDTELSQPVLDALG 482 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR+ L+E+L T + LI + + +PH+ Sbjct: 483 IDPATWDDSQVCAPRGCPKCNNTGYKGRIGLYEVLEVTETMQELILQRAS--VPHIHALA 540 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM+T +QS ++ +G Sbjct: 541 IEEGMLTMRQSGIEKIRQGI 560 >UniRef50_Q1J1R7 Tfp pilus assembly protein, pilus retraction ATPase PilT n=22 Tax=Bacteria RepID=Q1J1R7_DEIGD Length = 403 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 135/329 (41%), Positives = 208/329 (63%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRA 58 ++ +I+ + + SD+ L + P ++++ G E P D +L+ +++ Q+ Sbjct: 7 DITDILRFAAEKGASDVILTAGLPPQFKLSGVYETHGFAPLAATDTRKLMYSMMNERQQR 66 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 I E +LDF+ +L E R R +AF QR + LRL+P+ +++G P + E+ + Sbjct: 67 IFEEKRELDFSFALGERARFRVNAFMQRGFVGGVLRLIPTQIRSAQEMGLPPHVIEIANA 126 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAM+ Y+N HI+T+EDP+E+++ ++ ++ QRE+G Sbjct: 127 PRGLVLVTGPTGSGKSTTLAAMIDYINSTKKLHIVTIEDPIEFMHGHKQSIVNQREVGSD 186 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 ++F LRAALR+ PDVIL+GE+RD ETIR A+TAAETGHLV+ TLHT A ++++R+V Sbjct: 187 TLSFQDALRAALRQAPDVILVGEMRDYETIRAAVTAAETGHLVMGTLHTNSAPESIDRIV 246 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP +++ +R QLA +L AV++Q+L GRV +ELLI PAV LIREGKT+Q Sbjct: 247 DVFPEEQQGQIRVQLANNLVAVMTQQLLPRLDGLGRVLAYELLIANPAVRALIREGKTYQ 306 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +QTG + GM+T + + Sbjct: 307 IVSTMQTGAREGMVTMDAYLANLYRRRII 335 >UniRef50_D2R472 Twitching motility protein n=8 Tax=Bacteria RepID=D2R472_9PLAN Length = 378 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 129/324 (39%), Positives = 193/324 (59%), Gaps = 3/324 (0%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRAI 59 +++++ +VK SD+H+ P +R+ GRM + D L++ + + Sbjct: 6 IDKLLQAAVKQGASDIHIVVGQPPVFRLHGRMRKLETKVLEADDAVGLMKSIAPERAQRE 65 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L E G DF + + R R S F QR +S+ LR +P+ +QLG P V +L+ Sbjct: 66 LQERGSADFGFAFGDLARFRVSIFKQRGFVSMVLRQIPNTMLTPQQLGLPDVCVKLVMRP 125 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL LVTG TGSGKSTTLA++V Y+N++ D HI+T+EDP+E+ + ++ + QREIG+ Sbjct: 126 RGLFLVTGPTGSGKSTTLASLVNYINENVDHHIITIEDPIEFYHYHKKSTVNQREIGVDV 185 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F+ +R ALR+DPDVIL+GE+RD ETI A++AAETGH+V TLHT A + R++D Sbjct: 186 PSFSEAIRRALRQDPDVILVGEMRDLETIEAAISAAETGHVVFGTLHTNSAQGTINRIID 245 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 +FP +D VR QL+ S+ V++Q L GR A +E+L+ T + NLIRE KT ++ Sbjct: 246 AFPGNLQDQVRTQLSTSIIGVVAQSLLPKIGGGRCAAYEILVVTSGIANLIRENKTFRIN 305 Query: 300 HVIQTGQQVGMITFQQSYQHRVGE 323 IQTG ++GM E Sbjct: 306 SAIQTGAKLGMQLMDDHLFRLWRE 329 >UniRef50_C0QPL5 General secretion pathway protein E (Type II traffic warden ATPase)(Cholera toxin secretion protein EpsE) n=1 Tax=Persephonella marina EX-H1 RepID=C0QPL5_PERMH Length = 476 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 101/381 (26%), Positives = 164/381 (43%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDD---- 55 + + +V+ + SD+H R+R+ G + + + + Sbjct: 97 LNSLFLKAVRSDASDIHFEPFSDRVVVRFRLDGVLHEVSTIPLNAYPQVVSRIKIISKLN 156 Query: 56 -QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 L ++G++ + + +R S G + +RLL LE+LG Sbjct: 157 VAEKRLPQDGRIKVKIG-EKKLDMRVSTLPTVFGERVVIRLLDRSDTLLTLEELGFEPDD 215 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++ +GL+LVTG TGSGKSTTL A + L + +I+T+EDPVEY Sbjct: 216 LEKYERIIRKPHGLVLVTGPTGSGKSTTLYASLLKL-KTPRKNIITIEDPVEYQIDGISQ 274 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA+GLR+ LR+DPD++++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 275 IQVNPKIDL---TFANGLRSILRQDPDIVMVGEIRDLETAEIAIHASMTGHLVLSTLHTN 331 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RLVD +A SL V++Q+L Sbjct: 332 DAPSAVARLVDMGVE------PFLVASSLEGVIAQRLVRKICESCKKEYIPRDDEVEEIN 385 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GR+A++E++ + +I K + V + Sbjct: 386 RYMGRELKIGKLYKGEGCDNCLGTGFKGRIAIYEIMEIDEEMRAVIS--KQPESMAVKEK 443 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 + GM T Q +V +G Sbjct: 444 ALEKGMRTLIQDGLLKVVKGV 464 >UniRef50_P52052 Uncharacterized protein yggR n=137 Tax=Enterobacteriaceae RepID=YGGR_ECOLI Length = 326 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 325/325 (100%), Positives = 325/325 (100%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL Sbjct: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAIL 60 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN Sbjct: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM Sbjct: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS Sbjct: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH Sbjct: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 Query: 301 VIQTGQQVGMITFQQSYQHRVGEGR 325 VIQTGQQVGMITFQQSYQHRVGEGR Sbjct: 301 VIQTGQQVGMITFQQSYQHRVGEGR 325 >UniRef50_C0GQP1 Type II secretion system protein E n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQP1_9DELT Length = 563 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 110/380 (28%), Positives = 172/380 (45%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +V+ SD+HL R+RI G ++ + + L + D Sbjct: 185 VNRIMTGAVEKKASDIHLEPFEGRIQVRYRIDGILQKFMEMPGHMHQALATRIKIMAGLD 244 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 + ++G++ ++ ++ +R S +G S+ +R+L LEQLG P Sbjct: 245 IAERRVPQDGRIRSRIA-GKDIDIRVSCLPTVYGESVVMRILDRSSASFTLEQLGFPGRE 303 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + EL+ S +G+ILVTG TGSGK+TTL A + +N I+T+EDPVEY Sbjct: 304 YQLFQELIHSPHGIILVTGPTGSGKTTTLYAALNAINS-IQKKIITVEDPVEYELEGINQ 362 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL +FA GLR+ +R+DPDVIL+GE+RD ET +A+ +A TGHLV +TLHT Sbjct: 363 VHVNPRYGL---SFADGLRSIVRQDPDVILIGEIRDRETADIAIQSALTGHLVFSTLHTN 419 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA AV RL++ LA S+ +++Q+L Sbjct: 420 DAAGAVARLMEIGVED------YLLASSIIGIMAQRLVRILCPECRQPFSPEARILKKYD 473 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR A+FELL T + LI K+ + G Sbjct: 474 LAADNDLPQELYQPAGCPACSHTGYSGRTAIFELLGITEEIRELIIGNKSA--AQIRNAG 531 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM ++ ++V +G Sbjct: 532 VKQGMTLLRRDGWNKVKQGV 551 >UniRef50_C1RHW7 Pilus retraction protein PilT n=3 Tax=Actinobacteridae RepID=C1RHW7_9CELL Length = 378 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 136/331 (41%), Positives = 199/331 (60%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 M ++E++ V+ SD H + P R+ G ++ P + L L Q Sbjct: 1 MPIDEVLREMVRLGASDAHFTTGSPPMVRLSGALQPLEQFGPVMPDGLRRSLYAILTQKQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R E +LD + ++ R R + + QR I A R++P LE+LG P V+ Sbjct: 61 RERYEEELELDVSYAVRGLARFRVNVYQQRESIGAAFRVIPYEIKPLEELGVPAVVGTFA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GL+LVTG TGSGKSTTLA+++ N+ HI+T+EDP+E+L+ ++ L+ QRE+G Sbjct: 121 GLPRGLVLVTGPTGSGKSTTLASIIDLANRTRQDHIMTVEDPIEFLHRHKKSLVNQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA+ L+ LR+DPD+IL+GE+RD ETI +ALTAAETGHLV ATLHT+ AAQ ++R Sbjct: 181 ADTHSFANALKHVLRQDPDIILVGEMRDLETISVALTAAETGHLVFATLHTQDAAQTIDR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 ++D FP+ ++ VR QLAG+++AV+ Q L GR E+L+ TPA+ NLIREGKT Sbjct: 241 VIDVFPSHQQAQVRTQLAGAIQAVVCQTLCKRADGPGRAVATEVLVATPAIRNLIREGKT 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ +Q G + GM T Q V +G++ Sbjct: 301 HQIYSSMQAGAKQGMHTMDQHLADLVKQGKI 331 >UniRef50_C6BWY7 Type II secretion system protein E n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWY7_DESAD Length = 530 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 99/362 (27%), Positives = 167/362 (46%), Gaps = 52/362 (14%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ SD+H+ R+R+ G + + + + D Sbjct: 169 VNNTFRDAIAQGASDIHISPYEDGLEIRFRVDGILHVVNTVPRKYQAAIISRIKIMSNLD 228 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTVL 112 + ++G++ + + + +R ++ G + +R+L +++ +G + Sbjct: 229 IAERRIPQDGRIRLKMEQS-DYDIRVASTPTVFGEGVVMRILDKSSIKVDISDVGFEPDM 287 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L+ +G ILVTG TGSGK+TTL A + Y+ + + I+T EDPVEY Sbjct: 288 LETWKSLVHRPHGAILVTGPTGSGKTTTLYASLNYI-KSPELKIITTEDPVEYQLRGIDQ 346 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFA+ LR+ LR+DPDVI++GE+RD ET +A+ ++ TGHLVL+TLHT Sbjct: 347 IQVNPKVGL---TFAAALRSILRQDPDVIMVGEIRDFETAEIAIQSSLTGHLVLSTLHTN 403 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RLV+ A +L ++Q+L Sbjct: 404 DAPTAITRLVEMGI------APYLAAPTLAGAMAQRLLRRLCSNCKKQGADGKWQAVGCE 457 Query: 269 -----KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGE 323 +GR+ +FELLINTPA+ LI+ G + + Q+ GM T Q + + Sbjct: 458 VCDGSGYKGRLGIFELLINTPAIQTLIQNGASA--ADIGAQAQKEGMRTLLQDGLAKAAK 515 Query: 324 GR 325 G Sbjct: 516 GL 517 >UniRef50_B5YIG2 Type IV-A pilus assembly ATPase PilB n=4 Tax=Bacteria RepID=B5YIG2_THEYD Length = 572 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 104/380 (27%), Positives = 166/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +I+ ++ SD+H+ R+RI G + P ++ L + D Sbjct: 193 VNQIIVNAISKRASDIHIEPFEDNIYIRYRIDGVLHDILTLPPKLKSALITRIKIMANMD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G++ + + R S G + LR+L QL+ +LG Sbjct: 253 ISERRLPQDGRIKMKIG-KKEVDFRVSTLPSIFGEKIVLRILEKGSLQLDLTKLGFEEES 311 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L G+ILVTG TGSGK+TTL + + L + + +I+T+EDPVEY Sbjct: 312 LNFFIEALSKPYGMILVTGPTGSGKTTTLYSSLMKL-RKPEVNIVTVEDPVEYTLPRITQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +IG TFA LR+ LR+DPD+IL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 371 VQVQEDIGR---TFAQVLRSFLRQDPDIILVGEIRDFETAEIAIKAALTGHLVLSTLHTN 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RLV+ +A S+ +++Q+L Sbjct: 428 DAPSTITRLVNMGIE------PFLIASSVILIVAQRLVRKLCESCKKEQKISKETFLKLG 481 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GRVAL+E++ + LI G + + + Sbjct: 482 FPEESFDSLKIYEAQGCAECNQTGYRGRVALYEVMPIKDEIRELILTGAST--NEIKKEA 539 Query: 306 QQVGMITFQQSYQHRVGEGR 325 ++GM+T + S ++ G Sbjct: 540 IKLGMLTLRHSGIRKIMAGI 559 >UniRef50_C1AA13 Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA13_GEMAT Length = 388 Score = 412 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 127/331 (38%), Positives = 195/331 (58%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME----AAPFDTPDVEELLREWLDDDQ 56 +++ ++ ++ + SDLH+ + + R+ G + D +L L ++Q Sbjct: 9 ISLRTLLDEMIERDASDLHVSAGDRPKLRVDGDIVSATVEHVLTPRDTLQLAYSVLTENQ 68 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + +LDF+ +A R RG+ F QR +S+ +R +P +L P V+ Sbjct: 69 KKRFEMEDELDFSFGIANLSRFRGNVFKQRGCVSMVIRRIPFQIKTFAELQLPQVISSFA 128 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + GL+LVTG TGSGKSTTLAAM+ +N HI+T+EDP+E+++ + C+I QRE+G Sbjct: 129 ERPRGLVLVTGPTGSGKSTTLAAMIDKINTERRGHIITVEDPIEFIHRHRNCIINQREVG 188 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FAS L+ ALREDPDVIL+GE+RD ETI+ ALT AETGHLV ATLHT AA+A+ R Sbjct: 189 ADTKSFASALKYALREDPDVILIGEMRDLETIQAALTIAETGHLVFATLHTNSAAEAINR 248 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-KQEGRVALFELLINTPAVGNLIREGKT 295 ++D FP+ ++ VR QLA L +++Q L GR E+L+ TPA+ LIR+ K Sbjct: 249 IIDVFPSHQQSQVRAQLAFVLEGIITQVLLPRLTGRGRAMAAEILVVTPAIRALIRDDKV 308 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ ++Q+G++ GM T + ++ Sbjct: 309 HQIYSLMQSGKKFGMQTMNDALYQLYVSRQV 339 >UniRef50_A6DJN8 General secretory pathway protein E n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJN8_9BACT Length = 517 Score = 412 bits (1060), Expect = e-114, Method: Composition-based stats. Identities = 105/357 (29%), Positives = 168/357 (47%), Gaps = 47/357 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + +V+ SD+H+ R+RI G + + L + Sbjct: 161 VNDVFSRAVELGASDIHVEPGDGQLNIRYRIDGILHTHFTPPFQQFAAISSRLKLIGGLN 220 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 + ++G+++ ++S + +R + +G S+ +RLL + LE +G VL Sbjct: 221 IAERRIPQDGRIELSIS-GKAIDVRMNTLPGMYGESIVMRLLQKNLQDFTLESIGMSAVL 279 Query: 113 PEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +K GL+LV G TGSGK+TTL + LN + I+T+EDP+EY Sbjct: 280 KDKFIAKIKKPYGLVLVVGPTGSGKTTTLYCALNILNS-GNEKIITIEDPIEYQINGITQ 338 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++ IGL +FA GLR+ +R+DPD+IL+GE+RD ET +++ AA TGHLVL+TLHT Sbjct: 339 VQVKKSIGL---SFADGLRSIVRQDPDIILVGEIRDKETAEISINAALTGHLVLSTLHTN 395 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA A+ RL D +A SL AVLSQ+L Sbjct: 396 DAAGAISRLQDMGVEN------FLIASSLVAVLSQRLLRRVCSACGGKEENFPCRKCANT 449 Query: 269 KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 +GRV ++E L + N + E K + GM T ++ +V G Sbjct: 450 GYKGRVGVYEFLEVNQRIQNAVMEQKDSG--QINAIAVSQGMQTIAENANEKVEAGV 504 >UniRef50_A5IML1 Twitching motility protein n=11 Tax=Thermotogaceae RepID=A5IML1_THEP1 Length = 360 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 133/327 (40%), Positives = 203/327 (62%), Gaps = 5/327 (1%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDD----DQRAIL 60 +I+ + +D+H+ P +RI G + +E + L D + Sbjct: 10 KIITEAYGLRATDVHISVGCPPYYRIDGDLVPQEKYGKLTKESIMNALKDLFTEIGQPFP 69 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 + ++DF+ ++AE R+RG+ + +R +LA RL+P ++LG P +L ++ + Sbjct: 70 PKTKEVDFSFTVAEAIRVRGNLYYERKNPALAFRLIPKKIRTFQELGLPEILKTFVERKY 129 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GLILV G TGSGKSTTLAAM+ ++N++ HI+T+EDP+EY++ +++ +I QRE+G Sbjct: 130 GLILVAGPTGSGKSTTLAAMIDHINENFPHHIITIEDPIEYVFTNKKSVIHQRELGSDTD 189 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 +F +GL+ ALR+DPDVIL+GE+RD ET+ LALTAAETGHLVLAT+HT AA A ER++D Sbjct: 190 SFYNGLKYALRQDPDVILVGEMRDLETMALALTAAETGHLVLATVHTNSAASAPERIIDV 249 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLP 299 FPA ++ + QLA +L AV+ Q+L G + E+++ TPAV NLIRE K HQL Sbjct: 250 FPAHQQRQIALQLANTLIAVIYQRLVPKANGIGFTPILEIMVGTPAVRNLIRENKLHQLE 309 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 +IQ G + GM+ F + +G + Sbjct: 310 SLIQAGARHGMVLFDDALVKAALKGEI 336 >UniRef50_Q1IRV7 Twitching motility protein n=13 Tax=Bacteria RepID=Q1IRV7_ACIBL Length = 375 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 130/331 (39%), Positives = 191/331 (57%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 + + +++ ++ SDLH+ + P + R+ G++ P + ++L + D Q+ Sbjct: 3 VTLSDLLKKMLEMQGSDLHITTNSPPQVRVHGKLVPLDLAPLTPAETKQLAYSVMTDAQK 62 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 E+ +LDF+ L R R + F QR R++P +QLG P V+ +L Sbjct: 63 HRFEEDLELDFSFGLKGLARFRANCFNQRGACGSVYRVIPFEIKNFDQLGLPAVVSKLCD 122 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GLIL+TG TGSGKSTTLAAM+ +N HI+T+EDP+E+++ + CLI QRE+ Sbjct: 123 RPRGLILITGPTGSGKSTTLAAMIDKINIDRHEHIITIEDPIEFVHQHKNCLINQREVHS 182 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 F+ LRAALREDPDV+L+GE+RD ETI AL AETGHL LATLHT A+ + R+ Sbjct: 183 DTKGFSQALRAALREDPDVVLIGEMRDLETIESALRIAETGHLTLATLHTNSASSTINRI 242 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 +D FP+ ++ +R QL+ L ++ Q L GR E+L+ AV NLIRE K H Sbjct: 243 IDVFPSHQQSQIRAQLSLVLEGIMCQSLLPKVGGNGRAMAMEILVPNAAVRNLIREDKIH 302 Query: 297 QLPHVIQTGQQV-GMITFQQSYQHRVGEGRL 326 Q+ +QTGQ GM TF Q+ V + ++ Sbjct: 303 QIYSSMQTGQDKFGMQTFNQALATLVAQKQI 333 >UniRef50_A5GHN1 Tfp pilus assembly protein, pilus retraction ATPase PilT n=5 Tax=Cyanobacteria RepID=A5GHN1_SYNPW Length = 357 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 148/332 (44%), Positives = 204/332 (61%), Gaps = 8/332 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +E+++ V+ SDLH+ S P R G++ P L+ L++ QR Sbjct: 5 IEDLMQELVEAGGSDLHIASGQPPYGRFSGQLRPMRDEPLMEESCNRLIFSMLNNSQRKT 64 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L + +LD A L R R + + Q+ + LR L S P +E L P V+ E K Sbjct: 65 LEQTWELDCAYGLKGVARFRVNVYRQKGSYAACLRALGSKIPSIELLNLPPVVVETSKRP 124 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGK+TTLAA++ ++N HILT+EDP+E++Y S + L+ QR++ Sbjct: 125 RGLVLVTGPTGSGKTTTLAALLDHINHSRAEHILTIEDPIEFVYKSDQSLVHQRQLNEDT 184 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+ LRAALREDPDVIL+GE+RD ETI+LA++AAETGHLV TLHT AAQ V+R+VD Sbjct: 185 RSFANALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVDRMVD 244 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVD-----KQEGRVALFELLINTPAVGNLIREGK 294 FP ++ +R QL+GSL AV SQ L Q GRV E++INTPA+ NLIREGK Sbjct: 245 VFPPAQQTQIRVQLSGSLVAVFSQTLCRRSNPAPGQFGRVMAQEIMINTPAIANLIREGK 304 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 T QL IQTG ++GM T +++ V ++ Sbjct: 305 TAQLYSQIQTGGELGMQTLEKALADLVKTKQI 336 >UniRef50_C0QER1 PilB n=10 Tax=Proteobacteria RepID=C0QER1_DESAH Length = 739 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 102/380 (26%), Positives = 164/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++ VSD+H+ + R+R+ G + A ++ + L D Sbjct: 227 VNGILIKAINDGVSDIHIEPFERSLQVRYRLDGSLYKAMNLPLTIKNAVISRLKILAELD 286 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV- 111 + ++G++ + ++ R S G S+ +R+L L +LG Sbjct: 287 IAERRVPQDGRIKLRFAKNKSVDFRVSTLPTLFGESVVMRILDQSALNVDLSKLGFEADT 346 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + GL+LVTG TGSGK+TTL +++ LN+ D ILT EDPVE+ + Sbjct: 347 FEGIKRCISQPYGLLLVTGPTGSGKTTTLYSILNRLNRE-DTKILTAEDPVEFNFRGINQ 405 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + ++G MTFA+ L++ LR+DPD+I++GE+RD T +A+ AA TGHLV +TLHT Sbjct: 406 VPVKDDVG---MTFAAALKSFLRQDPDIIMVGEIRDINTAEIAIKAAMTGHLVFSTLHTN 462 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + RLVD LA S+ VLSQ+L Sbjct: 463 DCPSTIGRLVDIGIP------PYMLASSVSMVLSQRLARRLCPQCKQVVTGYDPTDLELY 516 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GRV L+EL+ T V I + + Sbjct: 517 GFSKAEIPDLKFYGPKGCANCNGTGYKGRVGLYELMEVTDEVSKAINAAVPED--QLRKL 574 Query: 305 GQQVGMITFQQSYQHRVGEG 324 Q GM T + + +V +G Sbjct: 575 AIQEGMKTLRDAGLVKVRQG 594 >UniRef50_Q01NU4 Type II secretion system protein E (GspE) n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NU4_SOLUE Length = 566 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 167/372 (44%), Gaps = 62/372 (16%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A +++ SD+H+ + R+R+ G + A +++ + L + Sbjct: 195 VNAMIADAIEKRASDIHIEPFEKEFRIRFRVDGVLFAQENPPRELKAAIISRLKLMAKLN 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC---PQLEQLGAPTV 111 L ++G++ + L LR S +G S+ +RLL L +LG Sbjct: 255 IAERRLPQDGRIKIKI-LGREVDLRVSTLPTLYGESVVMRLLDRSSGDFYDLRRLGFDDH 313 Query: 112 LPELL----KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + + +G+ LVTG TGSGKSTTL + + +N D I+T+EDPVEY Sbjct: 314 MLRQMEHFTSMPHGIFLVTGPTGSGKSTTLYSALKRIN-LPDKKIITIEDPVEYQMDGIN 372 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + +IGL TFA+GLR +R+DPDVI++GE+RD ET +A+ AA TGHLV ++LHT Sbjct: 373 QIHVNPQIGL---TFAAGLRHIVRQDPDVIMVGEIRDRETADIAIRAALTGHLVFSSLHT 429 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 A A+ RLVD + SL AVL+Q+L Sbjct: 430 NDAPSAITRLVDMGVEN------YLITSSLVAVLAQRLVRVICPQCKIFAGEVLSPEGEM 483 Query: 268 --------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITF 313 R+ +FE++ + V LI + + + ++ GM Sbjct: 484 METWRGQGCDHCGGRGYHARMGIFEMMDVSDEVRKLIMGNADASI--LTRAARKNGMRNL 541 Query: 314 QQSYQHRVGEGR 325 ++ ++ +G Sbjct: 542 REDGWRKIRDGV 553 >UniRef50_A7HJC2 Type II secretion system protein E n=11 Tax=Thermotogaceae RepID=A7HJC2_FERNB Length = 569 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 113/378 (29%), Positives = 175/378 (46%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + IV+ +++ + SD+H+ R+R+ G + ++ + + D Sbjct: 189 VSNIVSHAIELDASDIHIEPQRKNVVVRYRVDGVLRRITEYPRNMHSAVVSRIKILSGLD 248 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT-- 110 L ++G+ F E LR S HG + +R+L S +LE LG Sbjct: 249 IVERRLPQDGKF-FIKKDEEQFDLRVSTMPSVHGEKVVMRILKVSSSKKKLEDLGYSPYN 307 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +L++ G+ILVTG TGSGKSTTL A++ LN D +I+T EDPVEY Sbjct: 308 YERIKKLIEHPYGIILVTGPTGSGKSTTLVAVINSLNSE-DVNIVTAEDPVEYTVDGITQ 366 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 EIGL TFA LRA LR+DPD+I++GE+RD ET +LA+ A+ TGHLVL+TLHT Sbjct: 367 CQVNAEIGL---TFAKYLRAFLRQDPDIIMVGEIRDKETAQLAVEASLTGHLVLSTLHTN 423 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A++RLV+ + ++ SL V+ Q+L Sbjct: 424 TAAGAIDRLVNMGIE------PSLISASLIGVMGQRLVRKVCPYCKVETELPPEYAEKAK 477 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR A+ E+LI + LI++ + + + + Sbjct: 478 KIFPDMKPIQYVGQGCDKCNNTGYKGRTAVAEVLIVNDEIRRLIQKEAST--FELDKAAR 535 Query: 307 QVGMITFQQSYQHRVGEG 324 + GMI+ Q ++V G Sbjct: 536 KNGMISMFQDGLYKVLSG 553 >UniRef50_A6WCF2 Twitching motility protein n=56 Tax=Bacteria RepID=A6WCF2_KINRD Length = 382 Score = 409 bits (1052), Expect = e-113, Method: Composition-based stats. Identities = 129/329 (39%), Positives = 192/329 (58%), Gaps = 5/329 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD----VEELLREWLDDDQRA 58 + +++ +++ SD+HL R+ G +E ++E++ L QR Sbjct: 33 VNDVLIRALELGASDIHLTVGTHPSARVSGEVEPMDEFPRMTTNVLQEMIYAILTQKQRE 92 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 N +LDFA + + R R + + QR A R +P LE LG P V+ Sbjct: 93 TFEANLELDFAYQVPGHSRFRVNVYRQRESTGAAFRQIPFEIKPLEDLGVPPVVGSFAGL 152 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 + G +LVTG TGSGKSTTLA++V N+ HI+T+EDP+E+L+ + C++ QRE+G Sbjct: 153 QRGFVLVTGPTGSGKSTTLASVVDLANRTRRDHIMTVEDPIEFLHRHKSCIVNQREVGED 212 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA+ L++ LR+DPD+IL+GE+RD ETI +ALTAAETGHLV TLHT AA ++R++ Sbjct: 213 TKSFANALKSVLRQDPDIILVGEMRDLETISVALTAAETGHLVFGTLHTSSAASTIDRVI 272 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FP ++ +R Q AG+++ ++ Q L GRV E+L+ TPA+ NLIREGKTHQ Sbjct: 273 DVFPPHQQTQIRAQFAGAIQGIVCQTLCKRADGRGRVVATEVLVATPAIRNLIREGKTHQ 332 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +Q G Q GM T Q V ++ Sbjct: 333 IGTAMQAGAQFGMHTLDQHLAELVKTRQI 361 >UniRef50_Q3Z802 Twitching mobility protein n=13 Tax=Bacteria RepID=Q3Z802_DEHE1 Length = 363 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 142/331 (42%), Positives = 204/331 (61%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT----PDVEELLREWLDDDQ 56 M +E++ ++V+ SDLHL P RI G ++ +E++L E +Q Sbjct: 1 MRADELLKIAVEKKASDLHLRVPNPPVLRIDGALKPQTDWPVLYNKAIEQILEEITTPEQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R I +LDFA S+A R R + QR IS+A R +P +++LG P + EL+ Sbjct: 61 REIFYAEKELDFAYSVAGVARFRVNVMKQRGSISIAFRQVPFEIRSIDELGVPKICKELI 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GLILVTG TGSGKSTT+AAMV +LN +++T+EDP+EYLY + RC+I QR++G Sbjct: 121 LKPRGLILVTGPTGSGKSTTMAAMVDHLNNTDSRNVITIEDPIEYLYTNNRCIIAQRDLG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +F++ L+ ALR DPDVIL+GE+RD ETI A++AAETGHLV+ TLHT A Q ++R Sbjct: 181 DDTKSFSTALKYALRHDPDVILVGEMRDLETISTAISAAETGHLVVGTLHTTDAPQTIDR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-DKQEGRVALFELLINTPAVGNLIREGKT 295 L+D FP ++ +R QL+ + AVL Q L + +GRVA FE+++ AV NLIR+ K Sbjct: 241 LIDIFPPDQQQQIRMQLSLVIEAVLVQTLLPKREGKGRVAAFEIMVANTAVRNLIRDKKA 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 H+L +V+Q + GM T QS V + + Sbjct: 301 HELHNVMQLSAKDGMQTLDQSLAGLVRQNIV 331 >UniRef50_B1I3E7 Type II secretion system protein E n=4 Tax=Clostridia RepID=B1I3E7_DESAP Length = 561 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 114/382 (29%), Positives = 167/382 (43%), Gaps = 73/382 (19%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I +V + SD+H+ + R+RI G + + L + D Sbjct: 182 NAIFNQAVWASASDVHIEPLEKSLRVRFRIDGVLHNILQPPRHLHASLVSRIKVMANMDI 241 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL- 112 + ++G+ V + +R ++ +G L LRLL LE+LG P + Sbjct: 242 AERRVPQDGRFTLRVE-GKTIDVRVASLPGSYGEKLTLRLLDRSVRLISLEELGFPPEVL 300 Query: 113 ---PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 ++++ GLILVTG TGSGKSTTL A + LN + H++T+EDPVEY + Sbjct: 301 ANYRKVMRRPYGLILVTGPTGSGKSTTLYATLSALNT-PEKHVVTVEDPVEYRLDGVNQI 359 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 GL TFA+GLR+ LR DPD+I++GE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 360 QINPRAGL---TFATGLRSILRNDPDIIMVGEIRDRETARIAVEAALTGHLVLSTLHTND 416 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV---------------------- 267 AA AV RL D A SL AV+ Q+L Sbjct: 417 AAGAVTRLGDMGIE------PFLTASSLVAVVGQRLVRVLCPQCAQSYELGREELLAGVP 470 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GR+ ++ELL+ + + L E + + Sbjct: 471 DFPLDDGEKTITLYRPGGCLRCSHTGYRGRMGVYELLLVSETIQRLTLERAPA--REIKE 528 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 GM+TF++ RV +G Sbjct: 529 AAVAEGMVTFRRDGLLRVKQGI 550 >UniRef50_B8D2C8 Tfp pilus assembly protein, pilus retraction ATPase PilT n=16 Tax=Firmicutes RepID=B8D2C8_HALOH Length = 360 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 148/333 (44%), Positives = 216/333 (64%), Gaps = 7/333 (2%) Query: 1 MNMEEIVALSVK-HNVSDLHLCSAWPARWRIRGRMEAAPFDT-----PDVEELLREWLDD 54 M+++E + V+ ++SDLHL R G+++ + D++ + +E + D Sbjct: 4 MDIKEFLKKFVEDQHISDLHLTVNSKPVVRYDGKLKVFEEFSGRIGFEDMQNITKELMTD 63 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 DQ E G+LDF+ S+ R R +A+ QR I+LALR++P+ P +E+LG P +L Sbjct: 64 DQWQQFQEKGELDFSYSVPGFSRFRVNAYYQRGAIALALRIIPTKIPTIEELGLPQILKN 123 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 L GL L TG TGSGK+TTLA+M+ +N++ AHILTLEDP+EYL+ + ++ QRE Sbjct: 124 LALMRKGLFLCTGPTGSGKTTTLASMINIINKNRQAHILTLEDPIEYLHRHNKSIVHQRE 183 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +G+ +F GLR+ALR+DPDVIL+GE+RD ETI +AL AAETGHLVLATLHT A Q + Sbjct: 184 VGIDTTSFKEGLRSALRQDPDVILVGEMRDHETISIALEAAETGHLVLATLHTNDAPQTI 243 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREG 293 +R++D FP Q++ VR QL+ +L ++SQ+L K GR+A E+LI TPAV N+IR+G Sbjct: 244 DRIIDVFPPQQQRQVRVQLSLTLNGIVSQQLLPRKDGNGRIAALEVLIGTPAVRNVIRDG 303 Query: 294 KTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 K+HQL +QTG + GMIT + + + Sbjct: 304 KSHQLYSSMQTGGKYGMITMDNYILDLLSKSLI 336 >UniRef50_P45792 Type IV pilus assembly protein tapB n=47 Tax=Proteobacteria RepID=TAPB_AERHY Length = 568 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 100/380 (26%), Positives = 164/380 (43%), Gaps = 69/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +I+ ++K SDLH + R+RI G + ++ L D Sbjct: 189 INKIMMDAIKRGASDLHFEPYETKYRIRFRIDGILHEIATPPVNLANRFSARLKVMARLD 248 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPT-- 110 L ++G++ +S ++ +R + G + +RLL S +EQLG Sbjct: 249 IAERRLPQDGRIKLKLSRNKSMDMRVNTLPTMWGEKIVIRLLDSSAARLNIEQLGFDDRQ 308 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L G+ILVTG TGSGK+ +L + LN + +I T EDPVE Sbjct: 309 KAQYLRALSKPQGMILVTGPTGSGKTVSLYTGLNILNTT-EVNISTAEDPVEINLPGVNQ 367 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR+ LR+DPDV+++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 368 VQVNPKAGL---TFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLSTLHTN 424 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA+ + R+++ +A S+ +++Q+L Sbjct: 425 SAAETLTRMMNMGVP------AFNIASSVTLIMAQRLARKLCDHCKAPEVVPEAELLELG 478 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GRV ++E+++ + + LI +G + Sbjct: 479 FTQQQLAAGLRLFKPVGCKDCSGGYKGRVGIYEIMLMSENIAKLIMQGANS--LQIAAIA 536 Query: 306 QQVGMITFQQSYQHRVGEGR 325 Q+ GM T + S + G Sbjct: 537 QKEGMRTLRISGLEKARIGV 556 >UniRef50_A0K2T8 General secretory pathway protein E n=91 Tax=cellular organisms RepID=A0K2T8_BURCH Length = 499 Score = 406 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 163/364 (44%), Gaps = 55/364 (15%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + + SD+H+ A R+R+ G + + L + D Sbjct: 135 INALLTQAAREQASDIHIEPFENASVVRFRVDGTLRDVVRPKKALHGALISRIKIMAQLD 194 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTV- 111 L ++G++ V +R S HG LRLL + LE LG Sbjct: 195 IAEKRLPQDGRITLRVG-GRPVDVRVSTLPTGHGERAVLRLLEKDAQRLNLEALGMGRDT 253 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+ +G++LVTG TGSGK+TTL A + L + A +I+T+EDP+EY + Sbjct: 254 LVQFDKLIGRPHGIVLVTGPTGSGKTTTLYASMSRL-ETATTNIMTVEDPIEYDLSGIGQ 312 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 IG MTFA LR+ LR+DPDVI++GE+RD ET ++A+ A+ TGHLVLATLHT Sbjct: 313 TQVNERIG---MTFARALRSILRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTN 369 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA AV RL D LA SL VL+Q+L Sbjct: 370 DAASAVTRLTDMGVE------PYLLASSLLGVLAQRLVRQLCPVCKEERHEDGRTVWHPV 423 Query: 268 -------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHR 320 GR ++ELL+ ++ +LI ++ G+ GM T + + Sbjct: 424 GCAKCGHSGYAGRRGVYELLVIDDSIRSLIHRNAAD--AEILAAGRAEGMRTLRDDAERW 481 Query: 321 VGEG 324 + G Sbjct: 482 LASG 485 >UniRef50_Q3A779 Tfp pilus assembly protein, pilus retraction ATPase PilT n=2 Tax=Desulfuromonadales RepID=Q3A779_PELCD Length = 347 Score = 406 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 142/329 (43%), Positives = 201/329 (61%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRA 58 ++ + + + SDLHL + P R G++E + LL E + + QR Sbjct: 3 KIDALFKILKEKGGSDLHLSAGNPPLIRRSGQLEPILTQVLTHEQNKALLYEIMGEAQRK 62 Query: 59 ILLENGQLDFAVSLAE-NQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 LDFA + E R R + F R G+ RL+P+ +QLG P + + + Sbjct: 63 TYETTRDLDFAYEVTELKSRFRANIFMGRLGMGAVFRLIPAEILSADQLGLPPAVLDFTQ 122 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LVTG TGSGKSTTLAAM+ ++N+ HILT+EDP+E+++ SQ+ LI QRE+G Sbjct: 123 FKKGLVLVTGPTGSGKSTTLAAMIDHVNRTRKEHILTVEDPIEFVHVSQQSLINQREVGR 182 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 H +FA+ L+AALREDPD+IL+GE+RD ETI LA+TAAETGHLV TLHT AA+ V+R+ Sbjct: 183 HTRSFAAALKAALREDPDLILVGEMRDLETIELAITAAETGHLVFGTLHTSSAAKTVDRI 242 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP +++ VR L SL+ V++Q+L R A E+L AV NLIREGKT Q Sbjct: 243 INVFPTNQQEQVRTMLGESLKGVIAQQLLRTVDGKRCAALEILSVNSAVSNLIREGKTFQ 302 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P VIQTG+ GM Q+ Q + G++ Sbjct: 303 IPSVIQTGKTQGMQLMDQAIQDLLTAGKI 331 >UniRef50_B8FQB2 Type II secretion system protein E n=4 Tax=Clostridiales RepID=B8FQB2_DESHD Length = 573 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 108/378 (28%), Positives = 166/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ +V + SD+H+ R+RI G + + + + Sbjct: 195 LNTIIENAVNNFASDIHIEPVDDELRVRFRIDGVLREIMRTPVGMTGPVVSRVKIMADLN 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 L ++G++ + V + LR S +G + LR+L LE LG Sbjct: 255 IAERRLPQDGRITYLVGR-KMIDLRVSTAPTMYGEKVVLRILDKGSVILEKASLGLQGHN 313 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + EL+ G++LVTG TGSGK+TTL + LN + +I+TLEDPVEY + Sbjct: 314 LELFDELIAKPYGIVLVTGPTGSGKTTTLYTALNQLNT-PEKNIITLEDPVEYNFKGVNQ 372 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA GLR+ LR+DPD+I++GE+RD+ET +A+ +A TGHLVL+T+HT Sbjct: 373 MQVNPKAGL---TFAKGLRSILRQDPDIIMVGEMRDNETAEIAVRSALTGHLVLSTIHTN 429 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RLVD ++ S+ ++SQ+L Sbjct: 430 DAPSAVTRLVDMEIE------PFLISASVVGIISQRLVRKICPNCVQEYPAELKDYAFLG 483 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR A+FE++ NLI G T + + Sbjct: 484 LSQDFPLKLRRGTGCPYCHDSGYKGRTAIFEIMPIYGGHRNLISRGATAD--ELREYAIS 541 Query: 308 VGMITFQQSYQHRVGEGR 325 GMIT ++S V G Sbjct: 542 QGMITLKKSATDLVLNGV 559 >UniRef50_B0TEE9 Type ii secretion system protein e, putative n=12 Tax=Firmicutes RepID=B0TEE9_HELMI Length = 570 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 108/380 (28%), Positives = 163/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + K SD+HL R+R G + L + + Sbjct: 190 VNTILQQAAKEGASDIHLEPQEGGVRVRYRADGILRHVLTLPKAAHPALLSRIKLLAKMN 249 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTVL 112 L ++G++ + + +R S HG +RLL + + QLG + Sbjct: 250 IAEKRLPQDGRIQTKLG-DKMIDMRVSTLPAIHGEKCVIRLLDKSNVRFDLRQLGFRDEV 308 Query: 113 ----PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++++ G+IL+TG TGSGK+TTL A + LN + +I+T+EDPVEY+ Sbjct: 309 LRAYEKIVRNPYGMILITGPTGSGKTTTLYASIHELNT-PEKNIVTVEDPVEYVLDGVNQ 367 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL FASGLR+ LR+DPDVIL+GE+RD ET + + AA TGHLV +TLHT Sbjct: 368 VQVNMRAGLD---FASGLRSILRQDPDVILVGEIRDRETAEIGVRAATTGHLVFSTLHTN 424 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA +V RLVD +A SL V++Q+L Sbjct: 425 DAAGSVNRLVDMGVE------PFLVASSLVGVVAQRLVRRVCANCKRPYTPERGSPERIY 478 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR+A+ E+L T A LI E + + Sbjct: 479 LGVADDAPLTLFRGRGCVACNHTGYKGRLAIHEVLTVTAAQRKLILERASAD--AITAQA 536 Query: 306 QQVGMITFQQSYQHRVGEGR 325 GMI +Q +V +G Sbjct: 537 ICDGMIPIRQDGMSKVLQGL 556 >UniRef50_A7A8S6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A7A8S6_BIFAD Length = 601 Score = 406 bits (1044), Expect = e-112, Method: Composition-based stats. Identities = 130/325 (40%), Positives = 191/325 (58%), Gaps = 5/325 (1%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQRAILLE 62 + VK N SDLHL P R+ G++ A + E ++ ++ + + Sbjct: 252 IRQLVKLNASDLHLVINDPPMLRVDGKLRPAKGLSVWTKDHTYEAVKVMTNELEMERFKD 311 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 + +LD + ++ + R R + + R G+ ALR +P+ ++LG + +L GL Sbjct: 312 DLELDISFAIGDLLRFRVNVYRDRMGVCAALRTIPTEIKTAQELGIDPRIADLALLPRGL 371 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LV G TGSGKSTTLAA+V N HI+T+EDP+E+++ +RC++ QRE+G +F Sbjct: 372 VLVCGPTGSGKSTTLAAIVDKANAERADHIITIEDPIEFVHQHKRCVMSQREVGTDTKSF 431 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 A L+ ALREDPD+I +GELRD ETI ALTA ETGHLV ATLHT+ A V+RL+D +P Sbjct: 432 AEALKRALREDPDIIEVGELRDLETISTALTAVETGHLVFATLHTQDAGSTVDRLIDVYP 491 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHV 301 ++ +R Q+A +LRAV+ Q L GR E++IN PAV LIR GK HQ+ V Sbjct: 492 ENQQQQIRVQVASTLRAVIVQTLIPRASGHGRAPATEVMINNPAVAALIRSGKAHQIRTV 551 Query: 302 IQTGQQVGMITFQQSYQHRVGEGRL 326 +Q+G++ GM T Q V +G + Sbjct: 552 LQSGEKEGMHTLDQDLARLVNKGVI 576 >UniRef50_Q2JR70 Twitching mobility protein PilT n=32 Tax=Cyanobacteria RepID=Q2JR70_SYNJA Length = 455 Score = 406 bits (1044), Expect = e-112, Method: Composition-based stats. Identities = 131/328 (39%), Positives = 197/328 (60%), Gaps = 3/328 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE---ELLREWLDDDQRA 58 + ++V + + SD+HL R+R RG++ + E LRE L ++Q Sbjct: 105 TLRQLVQEAYEKGYSDIHLGVGEVPRFRDRGQIVIGNYPVTTTEVFYSWLRESLPENQIR 164 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 E +LD A+ R R + F G ++ LRL+P LEQL AP VL + + Sbjct: 165 QFEECLELDTAIQYEGLVRCRVNCFVSLLGPAMVLRLIPLKILTLEQLRAPEVLKRIAEE 224 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LVTG TGSGKSTTLAAMV Y+N + HI+++EDP+E+++ S++ L++QRE+G+H Sbjct: 225 HKGLVLVTGPTGSGKSTTLAAMVDYINSNFAKHIISIEDPIEFVHQSKKSLVRQREVGIH 284 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + FA+ L+A+LREDPD+IL+GE+RD ET+ AL A +TGHLV TLHT A + +ERL+ Sbjct: 285 TLEFANALKASLREDPDIILIGEMRDRETVDTALKAGQTGHLVFGTLHTNSAVRTIERLL 344 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + +E++P+R QLA +L A+++Q L R A E++ NT A+ + I+ G ++ Sbjct: 345 GIYRPEEQEPMRLQLAETLVAIIAQTLVRTTDGKRTAAHEIMRNTDAIRDYIKRGAVDEI 404 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +I G GM T QS EGR+ Sbjct: 405 EELIADGSYEGMCTMNQSLFRLYQEGRI 432 >UniRef50_Q8DLE1 Twitching mobility protein n=9 Tax=Cyanobacteria RepID=Q8DLE1_THEEB Length = 446 Score = 405 bits (1043), Expect = e-112, Method: Composition-based stats. Identities = 133/328 (40%), Positives = 192/328 (58%), Gaps = 3/328 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEE---LLREWLDDDQRA 58 ME++V + +H SD+H+ R+R RGR+E + D E L E L Q Sbjct: 96 TMEQLVREAFEHGYSDIHVGVGEAPRFRDRGRLEITNYPVTDEETFNYWLNELLTPQQIE 155 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + + D A R+R + F G ++ LRL+P LEQL P V +L Sbjct: 156 QFRTHLEYDGAYQYEGLCRVRINIFVALKGPAMVLRLIPVKILTLEQLNLPPVFKDLCHY 215 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GLILVTG TGSGKSTTLAAMV Y+N HI+++EDP+E+++ S+R LI+QRE+G+H Sbjct: 216 HKGLILVTGPTGSGKSTTLAAMVDYINTEMQKHIISIEDPIEFVHQSRRSLIRQREVGIH 275 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + F + L+A+LREDPD+IL+GE+RD ET+ AL AA+TGHLV TLHT A + +ER++ Sbjct: 276 TLKFDNALKASLREDPDIILIGEMRDRETVNTALKAAQTGHLVFGTLHTNSAVKTIERIL 335 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + + E+ P+R Q+A SL AV++Q L R A+ E++INT A+ + I G+ ++ Sbjct: 336 NLYNPDEQGPMRMQVAESLVAVIAQALVRTTDGKRAAIHEIMINTDAIKDYILRGEVEEI 395 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +I GM T Q GR+ Sbjct: 396 EAIIPQCTYDGMCTMNQCLYELYEAGRI 423 >UniRef50_B2ULW6 Twitching motility protein n=4 Tax=Chlamydiae/Verrucomicrobia group RepID=B2ULW6_AKKM8 Length = 364 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 140/328 (42%), Positives = 207/328 (63%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRAI 59 +++ V+ SDLHL P + R+ G + A + + + LL E D Sbjct: 4 IDQYFKYLVEAGGSDLHLSEGQPPKVRVNGTISAISDENLEGQAFKNLLAEICDPQAFQK 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 LE G LDFA + E R R + F Q+HG+ RL+P+ LE+LG PTV+ E Sbjct: 64 YLEEGDLDFAYEMDETSRFRCNYFKQQHGLGAVFRLIPTKIATLEELGVPTVVKEFAHMR 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +GL+LVTG TGSGKSTTLAA++ Y+N + HI+T+E+P+E+++ +++ ++ QRE+ L Sbjct: 124 SGLVLVTGPTGSGKSTTLAAIIDYINSNQARHIITVEEPIEFVHPNKKSIVTQREVPLQT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA GLRA+LRED D++L+GE+RD ETI LALTAAETG LV TLHT A++ ++R++D Sbjct: 184 PSFADGLRASLREDSDIVLVGEMRDLETISLALTAAETGLLVFGTLHTNNASKTIDRIID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 FP+ ++ VR LAGSLR V++Q L + GRVA+ E+L TPAV +IREG T ++ Sbjct: 244 VFPSDQQSQVRTMLAGSLRGVVAQLLMKRSDKPGRVAVNEILFATPAVAAIIREGATQKI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 P VI G+ +GM + ++ +G + Sbjct: 304 PDVIVGGKAMGMQFMDDAIWQKLQQGIV 331 >UniRef50_B7APV7 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B7APV7_9BACE Length = 566 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 162/376 (43%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + + SD+H+ R+R+ G + + + L D Sbjct: 188 VNSIIEQAARQRASDIHIEPFEESIRVRYRVDGVLREVIEYDKSLLGAITARLKIMSGMD 247 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 ++G++ V +R S +G + +RL Q LG Sbjct: 248 ISEKRKPQDGRITIIVD-NREYDIRVSNLPTVYGEKVVMRLASKEGFKKQKSDLGLTPTD 306 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +LK+ +G+ILVTG TGSGKSTTL + LN + +I+T+EDPVE Sbjct: 307 LVKFDNILKNPHGIILVTGPTGSGKSTTLYTALSSLNSE-EVNIITVEDPVEANIDGINQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + MTFA+ LR+ LR+DPD+I++GE+RDSET +A+ A+ TGHLV++TLHT Sbjct: 366 VQVNNKAD---MTFANALRSILRQDPDIIMIGEIRDSETAEIAVRASITGHLVVSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RL D +A SL +++Q+L Sbjct: 423 STANSISRLADMGVE------PYLIADSLVGIIAQRLVRRLCECKKPRLATAEEKEELAV 476 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +GR+ ++E++ TP + ++I GK+ + + + Sbjct: 477 DPSEDIVLYEPCGCKMCDNTGYKGRIGIYEIMTITPKIKSMIARGKSAD--EIKEQAIEE 534 Query: 309 GMITFQQSYQHRVGEG 324 GM T + S V +G Sbjct: 535 GMSTLKASAAKYVLDG 550 >UniRef50_A1SFQ7 Twitching motility protein n=31 Tax=Bacteria RepID=A1SFQ7_NOCSJ Length = 430 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 129/331 (38%), Positives = 193/331 (58%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT----PDVEELLREWLDDDQ 56 +++++++ ++ SDLHL + P R+RG MEA + L + + Q Sbjct: 69 LSLDDLLIHVLRVGASDLHLTTGAPPTVRLRGEMEAIEGYPTLDGEQLRRTLYGVMTERQ 128 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R + E +LDFA ++ + R R + F QR + +R++P LE LG P + Sbjct: 129 RKVFEEELELDFAYAVPGHARFRVNVFQQREHLGAVMRMIPWEIVPLEDLGMPEAVAGFS 188 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 + GL+LVTG TGSGKSTTLAA++ +N+ HI+T+EDP+E+L+ + CL+ QRE+G Sbjct: 189 DLKRGLVLVTGPTGSGKSTTLAAIIDRINRTRRGHIVTIEDPIEFLHEHRGCLVNQREVG 248 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 F L+ LR+DPDVIL+GELRD +TI +ALTAAETGHLV ATLHT+ A + R Sbjct: 249 SDTHGFRDALKHVLRQDPDVILVGELRDLDTISVALTAAETGHLVFATLHTQSAQDTITR 308 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKT 295 +VD FPA+++ VR QLA +L+ V+ Q L +GR A E+++ + +IR+ K Sbjct: 309 VVDVFPAEQQQQVRTQLAATLQGVVCQTLVKTADDQGRAAAVEVMVCNSGIRAMIRDDKL 368 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ +Q G + GM T V GR+ Sbjct: 369 QQIQGALQAGARDGMQTLNAHLAALVKAGRI 399 >UniRef50_A8MGF8 Type II secretion system protein E n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MGF8_ALKOO Length = 560 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 95/376 (25%), Positives = 165/376 (43%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDDD---- 55 + I+ +VK SD+H+ R+RI G + + + + Sbjct: 183 LNSIIEQAVKERASDIHIEPYAEDIRVRFRIDGDLREIMTLAKNSMSGIVTRIKIIGKMN 242 Query: 56 -QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G+++ ++ + +R S +G + +RLL + + LG Sbjct: 243 IAEKRIPQDGRVETKIN-GRDIDMRISTLPTVYGEKIVIRLLDRSNFKFTKDALGFSQKD 301 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++L G++LVTG TGSGK+TTL ++ LNQ + +++T+EDPVEY Sbjct: 302 LNLFNQILAQPYGMVLVTGPTGSGKTTTLYTILQELNQ-IEKNVVTIEDPVEYKLKGINQ 360 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFASGLR+ LR+DPD++++GE+RDSET +++ AA TGHLVL+TLHT Sbjct: 361 MQVNIKAGL---TFASGLRSVLRQDPDIVMVGEIRDSETAEISIRAAITGHLVLSTLHTN 417 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + V RL+D ++ +L V+SQ+L Sbjct: 418 DSPSTVSRLIDMGINS------YLVSSALIGVISQRLVKLLCPKCKQIYEGQSLEKKILG 471 Query: 268 -------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 + +GR A+ E++ + + LI + + + + Sbjct: 472 VPEHEKLQLSKAVGCNFCNNGYKGRKAVHEIMPISKNIRQLIDRRAS--IDEIRKQAVTE 529 Query: 309 GMITFQQSYQHRVGEG 324 GM + +S G Sbjct: 530 GMHSLLESASRLAING 545 >UniRef50_B0S8Q3 Type II secretory pathway ATPase, protein E n=7 Tax=Leptospira RepID=B0S8Q3_LEPBA Length = 558 Score = 403 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 165/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I++ +V SD+H+ R+R+ G ++ + + Sbjct: 182 VNVILSQAVSERASDIHIEPFEKSVIVRYRVDGVLQKVLNPPKSYLAGISTRIKIMSNLN 241 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 L ++G++ ++ ++ +R S + G + +R+L ++ +G Sbjct: 242 IAENRLPQDGRIKLRLA-GKDVDVRVSIIPCQFGERIVMRILNKTDQKYSIDTMGFNPQI 300 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 EL+ G+ILVTG TGSGKSTTL + + +N + +I+T EDPVEY Sbjct: 301 LKEFKELIYKPYGIILVTGPTGSGKSTTLYSALSEINTE-ERNIITCEDPVEYQMDGISQ 359 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL TFA+GLR+ LR+DPDV+++GE+RD ET R+A+ A+ TGHLV +TLHT Sbjct: 360 MQMNDKIGL---TFAAGLRSILRQDPDVVMVGEIRDEETARIAIQASLTGHLVFSTLHTN 416 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A+ AV RLVD + S+ ++Q+L Sbjct: 417 DASSAVTRLVDMGIE------PYLITSSVLGFMAQRLVRVICKDCKTSYKPTDKDLAGLG 470 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR L+ELL + I +G + + Sbjct: 471 IQRKELKNGVLYRGKGCSSCLNSGYKGRTGLYELLTMNDEIKRAILQGADA--NRIKELA 528 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + G+ Q+ +++V EG Sbjct: 529 VKNGLSVLQEYGKYKVIEGV 548 >UniRef50_Q48JN2 General secretion pathway protein GspE n=3 Tax=Proteobacteria RepID=Q48JN2_PSE14 Length = 472 Score = 403 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 106/363 (29%), Positives = 165/363 (45%), Gaps = 54/363 (14%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + + SD+H+ R+R+ G + + L + D Sbjct: 109 INALLTQAARDEASDIHIEPYESHSVVRYRVDGSLRDVVSPRKALHGSLVSRIKIMAQLD 168 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 L ++G++ V+ +R S HG + +RLL +LE LG Sbjct: 169 IAEKRLPQDGRIALRVA-GRPIDIRVSTVPTGHGERVVMRLLDKQAGRLRLETLGMAPDV 227 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L L++ +G++LVTG TGSGK+T+L A + L+ +ILT+EDPVEY Sbjct: 228 LTRLDNLIRQPHGIVLVTGPTGSGKTTSLYAALARLDASTS-NILTVEDPVEYDLPGISQ 286 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I MTFA LRA LR+DPD+I++GE+RD ET ++A+ A+ TGHLVLATLHT Sbjct: 287 IQVNSKID---MTFALALRAILRQDPDIIMIGEIRDLETAQIAVQASLTGHLVLATLHTN 343 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + A+ RLVD LA SL VL+Q+L Sbjct: 344 DSVSAINRLVDMGVE------PFLLASSLLGVLAQRLVRRLCPQCRQPDPTASGCWRPQG 397 Query: 269 -------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRV 321 GR + EL V +LI +G + ++ + GM++ ++ Q V Sbjct: 398 CERCSGTGYSGRTGIHELFCIDDEVRSLIHQG--ADMQALMGAARNAGMVSMREDGQRWV 455 Query: 322 GEG 324 +G Sbjct: 456 RDG 458 >UniRef50_B9Y805 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y805_9FIRM Length = 368 Score = 403 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 129/330 (39%), Positives = 194/330 (58%), Gaps = 5/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQR 57 M+++ + + +DLHL P R+ G + P D+ +L ++ Q+ Sbjct: 10 MDLQAWMDRGRAMDCTDLHLTVGLPVVARMLGELTILGDEPLTKEDIHSMLATVMNRTQQ 69 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + G LDF +R +A+ Q+ ALRLL + P + L P + +L Sbjct: 70 EEY-QKGDLDFGFQDTHGYSVRVNAYYQKGNPCAALRLLRNTIPSFDDLMIPEAVRKLST 128 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTG TGSGKSTT+AAM+ ++ AHI+T+EDP+EY + ++ QRE+G+ Sbjct: 129 LPRGLVLVTGPTGSGKSTTMAAMINSISHERKAHIITIEDPIEYRFEHASSVVHQREVGV 188 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA LR+ALREDPDVIL+GE+RD ETI+ A+ AAETGHLV++TLHT A ++R+ Sbjct: 189 DVASFADALRSALREDPDVILVGEMRDFETIQAAIRAAETGHLVISTLHTNSAVSTIDRI 248 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQK-LEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 +D FP ++ +R QLA L+ V++Q+ L Q GR+A FE+L+ A+ ++IRE K H Sbjct: 249 IDVFPEAQQGQIRVQLASVLKGVVTQQLLVRQDQPGRLAAFEILLTNDAIASMIRENKAH 308 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ V+QTGQ+ GM V EG++ Sbjct: 309 QISSVLQTGQKAGMRQMDYDLARLVQEGKI 338 >UniRef50_C6CY56 Type II secretion system protein E n=3 Tax=Bacillales RepID=C6CY56_PAESJ Length = 554 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 100/378 (26%), Positives = 168/378 (44%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + +++ +V+ SD+H+ R+RI G + ++ + L Sbjct: 177 VNQMIQQAVQLRASDIHVDPGETSVTIRYRIDGVLRTERALPKQMQGFITARLKIMSKLN 236 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAP--- 109 L ++G++ + +R ++ HG + LRLL + ++QLG Sbjct: 237 IAERRLPQDGRMKMQFEF-KTVDIRVASLPTIHGEKIVLRLLDLSTGVKAVDQLGFNNHN 295 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 V E+++ G++L+TG TGSGK+TTL + + +LN+ D +I+T+EDPVEY Sbjct: 296 VQVFKEMIERPYGILLITGPTGSGKTTTLYSALSHLNEE-DTNIITVEDPVEYQLDGINQ 354 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL TFA+GLR+ LR+DP+V+++GE+RD+ET +A+ A+ TGHLVL+TLHT Sbjct: 355 VQVNPAIGL---TFATGLRSILRQDPNVVMVGEIRDTETAEIAIRASLTGHLVLSTLHTN 411 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + ++ R D +A SL V++Q+L Sbjct: 412 DSVSSITRFRDMGVE------PYLIASSLIGVVAQRLVRRICNDCREAQEATDQERLFLR 465 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GRVA+ E+L + LI + L + + + Sbjct: 466 SRGIQSQTVYRGRGCGNCGSTGYRGRVAIHEVLHINNEIRELITLNGS--LSELREAAAK 523 Query: 308 VGMITFQQSYQHRVGEGR 325 GMI +V G Sbjct: 524 QGMIQLMDDGLEKVTRGI 541 >UniRef50_D1N174 Type II secretion system protein E n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N174_9BACT Length = 534 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 105/360 (29%), Positives = 164/360 (45%), Gaps = 50/360 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ +++ SD+H+ R R+ G + + + + Sbjct: 175 VNDVFNRAIELGASDIHVEPGEDSVSIRCRVDGVLAEIMNVPRSQFPAIASRIKLIAGLN 234 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 + L ++G+ +F V +R S G S+ LRLL + + LG Sbjct: 235 IAESRLPQDGRTNFQVGR-VKLDMRVSTIPILTGESIVLRLLNNDAVTFDLRTLGMSDRD 293 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 EL++ +G+ILV G TGSGK+TTL +++ LN H I+T+EDPVEY A Sbjct: 294 LEQFNELIQIPHGMILVVGPTGSGKTTTLYSVIAQLNDHR-KKIITVEDPVEYKMAGLCQ 352 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IG+ TFASGLR+ +R+DPD+IL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 353 MQVNSKIGV---TFASGLRSIVRQDPDIILVGEIRDRETADIAINAALTGHLVLSTLHTN 409 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL+D +A +L VLSQ+L Sbjct: 410 DAVGAVTRLIDMGMES------FLVASALYGVLSQRLVRKTCTACRGTGSDASGGKCRRC 463 Query: 268 --DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 +GR +FELL + + + + + GM+T ++ +V G Sbjct: 464 NGTGYKGRCGIFELLRMNDDIRQAVNKNVPS--SELERLAIANGMVTLREDGIAKVRAGV 521 >UniRef50_A8UTG3 Type IV pilus assembly protein TapB n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTG3_9AQUI Length = 565 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 101/382 (26%), Positives = 159/382 (41%), Gaps = 73/382 (19%) Query: 4 EEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 ++ +V+ SD+H+ R+R+ G ++ ++++ L D Sbjct: 185 NGLIFEAVRMGASDIHIEPFEKKVLVRYRVDGVLKIYHQLPINIKDSLVARYKILSNLDI 244 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC---PQLEQLGAPTV- 111 ++G++ + + LR S +G + +R+ + +LE LG Sbjct: 245 AEKRKPQDGRIRIKIDR-KKIDLRVSTVPTVYGEKVVMRIQEAEKYLNVKLEDLGFEPDD 303 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + G+ILVTG TGSGK+TTL + + N+ D +I+T EDPVE Sbjct: 304 LEKFRGAIWKPWGMILVTGPTGSGKTTTLYSALMERNE-PDVNIMTAEDPVEVAIPGINQ 362 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL TF+S LRA LR+DPD+IL+GE+RD ET +A+ A+ TGHLV +TLHT Sbjct: 363 VQVNERIGL---TFSSVLRAFLRQDPDIILVGEIRDQETGDIAVRASLTGHLVFSTLHTN 419 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RL D + SL V++Q+L Sbjct: 420 DAPTTVTRLTDMGIE------PFLVGSSLVLVVAQRLIRRLCPDCKVPHDVPKEALVRMG 473 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR+A+ E++ + LI +G T + Sbjct: 474 VLKSPDEDAVIYKASEKGCPTCNNTGYKGRMAVHEIMEIDDELRKLIIKGGTAD--DIRD 531 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 Q GM T QS +V +G Sbjct: 532 LALQKGMRTLYQSGMLKVKKGI 553 >UniRef50_Q06581 Twitching motility protein n=117 Tax=Bacteria RepID=PILT_NEIGO Length = 374 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 149/305 (48%), Positives = 199/305 (65%), Gaps = 4/305 (1%) Query: 26 ARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSA 82 R+ G M +V ++ ++D QR I +N ++DF+ L R R +A Sbjct: 53 PMIRVHGDMRRINLPEMSAEEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNA 112 Query: 83 FAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVG 142 F G + R +PS LE+L AP++ ++ +S G++LVTG TGSGKSTTLAAM+ Sbjct: 113 FNTGRGPAAVFRTIPSTVLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMIN 172 Query: 143 YLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGEL 202 Y+N+ AHILT+EDP+E+++ S++ LI QRE+ H ++FA+ L +ALREDPDVIL+GE+ Sbjct: 173 YINETQPAHILTIEDPIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEM 232 Query: 203 RDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLS 262 RD ETI LALTAAETGHLV TLHT GAA+ V+R+VD FPA EK+ VR+ L+ SL AV+S Sbjct: 233 RDPETIGLALTAAETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVIS 292 Query: 263 QKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRV 321 Q L GRVA E+LI PAV NLIRE K Q+ V+QTGQ GM T QS Q V Sbjct: 293 QNLLKTHDGNGRVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLV 352 Query: 322 GEGRL 326 +G + Sbjct: 353 RQGLI 357 >UniRef50_B2A7G1 Type II secretion system protein E n=5 Tax=Firmicutes RepID=B2A7G1_NATTJ Length = 571 Score = 402 bits (1034), Expect = e-111, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 168/379 (44%), Gaps = 69/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +V+ + + SD+H+ R+RI G + ++LL + D Sbjct: 189 VNSLVSQAYEQGASDIHIEPTKQGMQIRYRIDGVLHNVATPPRYAKDLLISRVKIMAGMD 248 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPTV- 111 + + ++G+ ++ + LR S +G + +RLL L++LG Sbjct: 249 ITKKRIPQDGRSNYNIG-GHEIDLRVSTLPTIYGEKVVIRLLHKDKVIFSLDKLGFQQDN 307 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LLK+ G++LVTG TG GK+TTL + + +N + +I+T+EDPVEY Sbjct: 308 FKLYQGLLKNSAGMVLVTGPTGCGKTTTLYSSLNRINSS-EKNIITIEDPVEYQIEGINQ 366 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA+GLRA LR+DPD+I++GE+RD ET ++A+ +A TGHLV +TLHT Sbjct: 367 VQTNEKGGL---TFANGLRAILRQDPDIIMVGEIRDLETAQIAIRSALTGHLVFSTLHTN 423 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RLVD ++ ++ VLSQ+L Sbjct: 424 NAIATLSRLVDMGIP------PFLVSSAVEGVLSQRLVRIICSNCKIEYSPTAEEQEIYH 477 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR A+ ELLI + +++ + + + + Sbjct: 478 RYSGEQVDTLYKGKGCTNCNNTGYKGRTAIHELLILDKTLKDMLAREASE--RELTEEAR 535 Query: 307 QVGMITFQQSYQHRVGEGR 325 + G ++ +V +G Sbjct: 536 KRGFSYLIENAISKVSQGI 554 >UniRef50_Q1Q109 Strongly similar to general secretory system type II protein, ATPase component n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q109_9BACT Length = 582 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 105/377 (27%), Positives = 167/377 (44%), Gaps = 70/377 (18%) Query: 6 IVALSVKHNVSDLH---LCSAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 + +V SD+H ++ R+RI G + ++ + + D Sbjct: 206 MFLYAVLDKASDIHYEAFEDSFRVRYRIDGVLYERVSPPRELGIPINSRIKVMAGMDISE 265 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV---- 111 L ++G++ V + LR S + G S+ +RLL L++LG + Sbjct: 266 RRLPQDGRIKLNVG-GASIDLRVSTLPTKFGESIVMRLLDKSAVSLSLDKLGFRSEELKN 324 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 + +LL NG+ILVTG TGSGK+TTL A + YLN+ I+T EDPVEY + Sbjct: 325 IYQLLNIPNGIILVTGPTGSGKTTTLYAALNYLNE-ITTKIITTEDPVEYDVDGLIQVQV 383 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 IG+ FAS LR+ LR+DPD+IL+GE+RD ET R+A+ A+ TGHLV +TLHT A Sbjct: 384 NPSIGVD---FASCLRSILRQDPDIILVGEIRDEETARIAIQASLTGHLVFSTLHTNDAP 440 Query: 232 QAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------------- 268 + RL+D +A +L V+SQ+L Sbjct: 441 LTITRLIDIGVK------PYLIASTLECVISQRLVRKICASCKEEYEPSDELLNELNLTK 494 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GR+ ++E++ + LI E + + + ++ Sbjct: 495 AIAEGKRFFRGRGCSDCRKIGYRGRMGIYEIMPVNEEIRGLITEQASTNV--IRNVARKN 552 Query: 309 GMITFQQSYQHRVGEGR 325 GM T +++ + EG+ Sbjct: 553 GMNTLRENGLKAIFEGQ 569 >UniRef50_B8FE33 General secretory pathway protein E n=2 Tax=Desulfobacteraceae RepID=B8FE33_DESAA Length = 578 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 100/380 (26%), Positives = 167/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ +VK SD+H+ R+R+ G + ++ L + + Sbjct: 200 VNHILSQAVKARASDIHIEPYQTMLKVRYRVDGVLYDLIKPPKRIQSALVSRIKVMAKLN 259 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++G+++ + N +R S G + LRLL +L +G Sbjct: 260 IAEKRLPQDGRIEIRIG-DRNVDIRVSTIPTTFGERIVLRLLDKSTTILKLTDIGFTGEQ 318 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+ G+ILVTG TGSGK+T+L A++ +N D +I+T+EDPVEY + Sbjct: 319 LKTIHGLIHQPYGIILVTGPTGSGKTTSLYAVLSTINTE-DINIITIEDPVEYQISGIGQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA GLR+ +R+DPDVIL+GE+RD ET +A+ ++ TGHLV +TLHT Sbjct: 378 IQVNPKIDL---TFARGLRSVVRQDPDVILIGEIRDMETAEIAVQSSLTGHLVFSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 +A A+ RL+D ++ S+ AV++Q+L Sbjct: 435 DSASAITRLIDMNVE------PFLISSSVLAVMAQRLVRVLCPHCKEPHTPDEASMAFLK 488 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR +FE++ + +L+ + Sbjct: 489 MTPEDLAKGQIYKPVGCPECLQTGYHGRKGIFEIMPMDRDIKSLLLT--ASDANTIKAKA 546 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GMIT +Q ++V G Sbjct: 547 IENGMITLRQDGVNKVLAGI 566 >UniRef50_B8CZA0 Type II secretion system protein E n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZA0_HALOH Length = 514 Score = 401 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 108/375 (28%), Positives = 168/375 (44%), Gaps = 65/375 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ ++K SD+H+ R+RI G + P ++ + + Sbjct: 141 VNAIITTALKKGASDIHIEPFEDKLRLRYRIDGVLYENPAPPLELLPAIITRIKIMSELN 200 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTVL 112 L + G++ VS +R S HG + LRLL ++ LG + Sbjct: 201 IAERRLPQEGRIRIRVS-GRELDIRVSIIPALHGEGVVLRLLDKAARLLDIKNLGFSEAM 259 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+ +G+ILVTG TGSGK+TTL A + YLN I+T+EDPVEY Sbjct: 260 LKRYLNLINIPHGIILVTGPTGSGKTTTLYATLQYLNSS-SRKIITIEDPVEYQLEGINQ 318 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + EI FASGLR+ LR DPD+I++GE+RD ET ++A+ AA TGHLVLATLHT Sbjct: 319 IQVKPEINFD---FASGLRSILRHDPDIIMIGEIRDVETAKIAIQAALTGHLVLATLHTN 375 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV RL++ LA +L+ +L+Q+L Sbjct: 376 DAAGAVSRLLNMGVED------YLLAATLKGILAQRLVRVLCPRCKESYQPTSSEVNLID 429 Query: 269 ------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 +GR ++ELL TP + ++I + + + + ++ G Sbjct: 430 DDVELLYRPAGCTFCNNIGFKGRTGIYELLTVTPQIESMIVQRASS--SEIKEELKKTGY 487 Query: 311 ITFQQSYQHRVGEGR 325 + +V +G Sbjct: 488 TSLFTDGCIKVKDGL 502 >UniRef50_A7BSG5 Bacterial type II secretion system protein E n=1 Tax=Beggiatoa sp. PS RepID=A7BSG5_9GAMM Length = 512 Score = 401 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 103/383 (26%), Positives = 166/383 (43%), Gaps = 73/383 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + +V SD+H+ R+R+ G + + + + D Sbjct: 127 VNNMFSQAVDQRASDVHIEPEEHTFFVRYRVDGVLYEHLSLPRERFNAIASRIKLISGMD 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTV- 111 L ++G+L+ VS ++ +R S HG S+ +RLLP L QLG Sbjct: 187 IAERRLPQDGRLNTRVS-GQDLDIRVSCLPGVHGESIVMRLLPKERQTSRLGQLGMAPDH 245 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + +G+ILVTG TGSGKSTTL A + +N + I+T+EDPVEY Sbjct: 246 HNQFSQWISEPHGIILVTGPTGSGKSTTLYAALDAVN-NRTQKIITVEDPVEYQLNGITQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IG TFA LR+ LR+DPD++++GE+RD ET +A+ AA TGH+VL+TLHT Sbjct: 305 VQAHSDIG---YTFAHALRSILRQDPDIVMIGEVRDRETSEIAIQAALTGHMVLSTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A RL++ +A S+RAV +Q+L Sbjct: 362 DAVSAFTRLIEMGIE------PFLVATSVRAVQAQRLVRRLCPTCAEPTSVLAEIEAQTQ 415 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR+ ++E++ TP + LI + + Sbjct: 416 RILPTEIAEQPAQWKQPTGCPTCQGMGYQGRIGIYEMVYITPEMQTLILNRASA--TEMR 473 Query: 303 QTGQQVGMITFQQSYQHRVGEGR 325 Q + G T ++ + +G Sbjct: 474 QLAVKQGFRTLREDGFIKSYQGV 496 >UniRef50_A3DEG0 Type II secretion system protein E n=5 Tax=Clostridia RepID=A3DEG0_CLOTH Length = 787 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 96/378 (25%), Positives = 161/378 (42%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDDD---- 55 + I +V SD+H+ R+RI G++ + + + Sbjct: 409 VNIIFQKAVATRASDIHIEPQEDCVLIRFRIDGQLVEIMRYDRKILSSIVARIKIISGLN 468 Query: 56 -QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 + ++G++ + +R S G + +R+ + +LG Sbjct: 469 IAEKRIPQDGRIGIKID-DREYDMRVSVLPTMFGEKVVIRIADKEGFNVSKKELGFFEDD 527 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++ S G+ILVTG TGSGKSTTL + L + + +ILT+EDPVE Sbjct: 528 LEKFDQIISSPYGIILVTGPTGSGKSTTLYTALRELCK-PNVNILTVEDPVESTIKGINQ 586 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA+ LRA LR+DPD+I++GE+RDSET +A+ AA TGHLV +TLHT Sbjct: 587 VQVNVKAGL---TFATALRAFLRQDPDIIMVGEIRDSETAEIAIRAAITGHLVFSTLHTN 643 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA +V R++D L+ +L +++Q+L Sbjct: 644 DAASSVTRMIDMGIE------PFLLSSALVGLIAQRLVRRLCPHCKEAFQPDKNEREILG 697 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR+A++E+L + LI + + + + + Sbjct: 698 LKDDEEVTIYRAKGCDECNNTGYKGRIAVYEILTVNREIKELISKNVSSDV--IKDAAIK 755 Query: 308 VGMITFQQSYQHRVGEGR 325 +GM T + + V EG Sbjct: 756 MGMKTLRMNCTRLVKEGI 773 >UniRef50_C4Z588 Type IV pilus assembly protein PilB n=9 Tax=Clostridia RepID=C4Z588_EUBE2 Length = 615 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 162/377 (42%), Gaps = 67/377 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ +V+ SD+H+ + R+RI G + + + + D Sbjct: 189 INSVIEQAVRQRASDIHIEPMEKSIRVRYRIDGNLREIIDYDNTLLGAITTRIKIMSGMD 248 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQ--LGAPT-- 110 ++G++ V +R S +G +R+ +++ LG Sbjct: 249 ISEKRKPQDGRITLNVD-GREYDIRVSNLPTVYGEKCVMRIASKEGFNIDKSKLGLTPAD 307 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 V ++LK+ +G+ILVTG TGSGKSTTL + LN D +I+T+EDPVE Sbjct: 308 LKVFDDILKNPHGIILVTGPTGSGKSTTLYTALSELNTE-DVNIITVEDPVEANIDGINQ 366 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + L TFA+ LR+ LR+DPD+I++GE+RD ET +A+ A+ TGHLV++TLHT Sbjct: 367 VQVNNKANL---TFATALRSILRQDPDIIMIGEIRDGETAEIAVRASITGHLVVSTLHTN 423 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A +V RL D +A SL +++Q+L Sbjct: 424 STASSVARLEDMGIES------YLIADSLVGIIAQRLVRKLCDCKMPKEASAAEKEMLGL 477 Query: 268 -------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GR+ ++E++ TP++ LI K + Sbjct: 478 NPDEPFTVYEPCGCKLCNGTGYYGRLGIYEIMKITPSIKRLIS--KHADAEDIKNQAISE 535 Query: 309 GMITFQQSYQHRVGEGR 325 GM T + + + V EG Sbjct: 536 GMNTLKMAATNAVKEGV 552 >UniRef50_Q1Q644 Strongly similar to general secretion pathway protein E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q644_9BACT Length = 557 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 97/375 (25%), Positives = 154/375 (41%), Gaps = 66/375 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ +++ SD+H+ R+R+ G + ++ + + Sbjct: 179 VNSILTKAIEVGASDIHIEVFERNTRLRYRVDGVLGELAPPPRELYNSIVSRIKIMAKLN 238 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 L ++G++ V+ + LR S HG + +R+L LE LG Sbjct: 239 IAEKRLPQDGRIRMRVA-GKEIDLRVSIIPMSHGEGIVMRILDRTAVMLDLETLGFQPEF 297 Query: 113 ----PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+ G+ LVTG TGSGK+TTL A++ + + I+T+EDPVEY Sbjct: 298 LKKFRRLISRPEGMFLVTGPTGSGKTTTLYAVLKEIVS-PEVKIITVEDPVEYSMQGVNQ 356 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFASGLR+ LR DPDV+L+GE+RD ET +A+ A+ TGHLV +TLHT Sbjct: 357 IQVNPQIDL---TFASGLRSILRHDPDVVLIGEIRDRETASIAVQASLTGHLVFSTLHTN 413 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ------------------ 270 +A A RL+D ++ L VL+Q+L Sbjct: 414 DSASAFTRLMDMGVED------YLISSCLIGVLAQRLVRRLCPKCRELYMPGPEIRKTVG 467 Query: 271 ---------------------EGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR + E L+ + L+ K +++ + G Sbjct: 468 LEEGVPLYGPKGCDDCNNTGLKGRRTIAEFLVVDEGIRRLVLAHKDS--SEIMKEAVKKG 525 Query: 310 MITFQQSYQHRVGEG 324 T V G Sbjct: 526 TKTLWDDGLDLVRRG 540 >UniRef50_A9BY08 General secretory pathway protein E n=2 Tax=Proteobacteria RepID=A9BY08_DELAS Length = 575 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 103/379 (27%), Positives = 168/379 (44%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ +++ + SD+HL R+R+ G + AA P + + + D Sbjct: 193 VTGIISRAIELHASDIHLEPFEAGLQVRYRMDGVIHAAELVPPRLSAAVGSRVKLLAHLD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 L ++G++ + LR S HG S+ +R+L +LE +G Sbjct: 253 IAERRLPQDGRIKTR-AKGRELDLRVSTAPTVHGESIVMRVLDRANVRLRLESMGFEVDT 311 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LL +G++LVTG TGSGK+TTL A + ++ ++ I+T+EDPVEY Sbjct: 312 LERFNTLLAKPHGIVLVTGPTGSGKTTTLYAALSKIDAVSN-KIITVEDPVEYQLDGINQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA+ LR+ LR+DPD+I++GE+RD ET ++A+ +A TGHLVL+TLHT Sbjct: 371 IQVHPQIDL---TFANALRSILRQDPDIIMIGEMRDGETAQIAVQSALTGHLVLSTLHTN 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA AV R+ D + S+ VL+Q+L Sbjct: 428 TAAGAVTRMRDMGVES------YLITSSVNGVLAQRLVRTLCSHCKQPDTLPAAAVEGSG 481 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR + EL++ + I EG+ H + Sbjct: 482 LKRFLREGSPIYRAVGCEHCRGTGYKGRTGIHELMVIDEPLRRAIIEGQDANALHAM--A 539 Query: 306 QQVGMITFQQSYQHRVGEG 324 + GM++ +V G Sbjct: 540 AKSGMLSLYDDGLRKVASG 558 >UniRef50_B6J5I2 Type 4 pili biogenesis protein (Nuleotide-binding protein) n=6 Tax=Coxiella burnetii RepID=B6J5I2_COXB1 Length = 517 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 165/354 (46%), Gaps = 43/354 (12%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ ++ SD+H + R RI G + + L D Sbjct: 159 VNQVLTDAIYREASDVHFEPMQQHYRIRMRIDGILHTTTLLPNTQSPAMSSRLKVLAELD 218 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTV- 111 L ++G+ F + R S+ G + +RLL H + E+LG Sbjct: 219 ISEKRLPQDGRFYFTTLTHLKRDCRLSSCPTLFGEKIVIRLLNPVHHLLKFEELGLEEKP 278 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + +K GLILVTG T SGK+ +L A + +N +I T+EDP+E A Sbjct: 279 KQLIMKKIKQPQGLILVTGPTRSGKTVSLYAALNQINST-QKNISTVEDPIEIQLAGVTQ 337 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + + GL+ FA+ LRA LR+DPDVI++GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 338 VNIRPKAGLN---FAAVLRAFLRQDPDVIMVGEIRDFETASIAVRAAHTGHLVLSTLHTN 394 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-----------------DKQE 271 A + + RL+D LA L+ V++Q+L ++ + Sbjct: 395 SAVECITRLIDMGIE------PFNLASVLKLVVAQRLVRQLCAHCQATKISCPFCLNRYQ 448 Query: 272 GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 GR ++E+L TP++ LI + ++ Q + Q GM T Q+ ++ G Sbjct: 449 GRTGMYEVLPITPSIIELILQKRSAQ--EINACAIQEGMQTLWQAALNKAKTGI 500 >UniRef50_P37093 General secretion pathway protein E n=178 Tax=Proteobacteria RepID=GSPE_VIBCH Length = 503 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 102/378 (26%), Positives = 161/378 (42%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ ++K SD+H+ + R+R+ G + + + LL + D Sbjct: 127 INAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLD 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 + ++G++ + +R S HG + +RLL + L LG Sbjct: 187 IAEKRVPQDGRISLRIG-GRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAHN 245 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+K +G+ILVTG TGSGKSTTL A + LN + +ILT+EDP+E+ Sbjct: 246 HDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSS-ERNILTVEDPIEFDIDGIGQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + MTFA GLRA LR+DPDV+++GE+RD ET ++A+ A+ TGHLV++TLHT Sbjct: 305 TQVNPRVD---MTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL D ++ SL VL+Q+L Sbjct: 362 TAVGAVTRLRDMGIE------PFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFD 415 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR + ELL+ A+ LI Q ++ + Sbjct: 416 SKKKEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDALQELIHSEAGEQ---AMEKHIR 472 Query: 308 VGMITFQQSYQHRVGEGR 325 + + +V +G Sbjct: 473 ATTPSIRDDGLDKVRQGI 490 >UniRef50_A8Z6P0 Twitching mobility protein n=12 Tax=Epsilonproteobacteria RepID=A8Z6P0_CAMC1 Length = 377 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 143/330 (43%), Positives = 200/330 (60%), Gaps = 5/330 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRA 58 +++ ++ V + SDLHL S + RI G + D+E L + D Q++ Sbjct: 26 DIQTLLKTVVFNKASDLHLVSRSEPQIRIDGTLRPLEFGVLSGKDIENLCYALITDAQKS 85 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHG-ISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L N +LDFA+ L R RG+ + +G ++ A R++P P L+ L AP + ++K Sbjct: 86 ELENNKELDFAIELPNIGRFRGNYYYTMNGDLAAAFRIIPIDIPSLDDLNAPQIFKYIIK 145 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 E GLILVTG TGSGKSTTLAAM+ +N + HI+T+EDPVE+++ +++ L R IG Sbjct: 146 REKGLILVTGPTGSGKSTTLAAMLNEINLNYRKHIITVEDPVEFVHNNKKALFSHRNIGT 205 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++ L+ ALREDPD+IL+GE+RD ETI A+TAAETGHLV TLHT A Q + R+ Sbjct: 206 DTHSYSKALKFALREDPDIILVGEMRDRETISTAITAAETGHLVFGTLHTNSAIQTINRI 265 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VDSF E+ VRN L+ SL AV+SQ L GR A+ E+LIN A+ NLIRE K HQ Sbjct: 266 VDSFDGSEQLQVRNMLSVSLTAVISQSLIPKIGGGRCAVHEILINNMAISNLIRENKVHQ 325 Query: 298 LPHVIQTGQQV-GMITFQQSYQHRVGEGRL 326 + +Q QQ GM T Q+ + EG + Sbjct: 326 IYSQMQLNQQQTGMSTQTQALMKALKEGLI 355 >UniRef50_D2QZA7 Type II secretion system protein E n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZA7_9PLAN Length = 596 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 106/378 (28%), Positives = 164/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ +VK SD+H+ A R+RI G++ + ++ + + D Sbjct: 192 VNYVIYHAVKEGASDIHIEPAERCVRVRYRIDGKLYKSLEVPLNLLGAVTSRIKIMASLD 251 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G++ + LR S F G +R+L + L LG Sbjct: 252 ISERRLPQDGRVHVMLD-GRKVDLRVSTFPGNRGEKTVIRVLDTRSVSLNLRDLGFAEDI 310 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + + + NG++LVTG TGSGKSTTL A + + + +I T+EDP+EY Sbjct: 311 LTPLQQSINAPNGIVLVTGPTGSGKSTTLYAALNEIAS-MENNICTVEDPIEYHLPLINQ 369 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 Q +GL TF+ LR LR+DPDVI++GE+RD ET R A+ AA TGHLV +TLHT Sbjct: 370 FQVQERVGL---TFSKALRTLLRQDPDVIMVGEVRDDETARTAIQAALTGHLVFSTLHTN 426 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA A+ RL++ + +L AVL+Q+L Sbjct: 427 DAASAITRLINMGVE------PYLIGAALNAVLAQRLVRRICGKCREAYDPPRTLRKAIE 480 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GRV + ELLI + + I GK+ + + + Sbjct: 481 KMGYPMEKFFKGAGCRKCRNTGYSGRVGVHELLIVNDELRDAIVAGKS--VAELRRIAAA 538 Query: 308 VGMITFQQSYQHRVGEGR 325 M+T + +V EG Sbjct: 539 YNMVTLRHDGFRKVREGL 556 >UniRef50_A3ZX01 General secretion pathway protein E n=3 Tax=Planctomycetaceae RepID=A3ZX01_9PLAN Length = 575 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 103/382 (26%), Positives = 163/382 (42%), Gaps = 73/382 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPD--VEELLREWLDD--- 54 + EI+ +++ SD+H+ S R+RI G + + P + + L Sbjct: 185 VNEIMFEAIESRASDVHIESQGSGLVVRYRIDGMLHSQPVPPEINYFQAAIISRLKIMSR 244 Query: 55 --DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPT 110 L ++G++ V +R S HG S+ +R+L + LG Sbjct: 245 LNIAEKRLPQDGRIKLKVR-GREIDIRVSMIPMIHGESIVMRILDKGSLTFDLRTLGMDE 303 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 ++ +G++LVTG TGSGK+TTL + + + Q I+T EDPVEY Sbjct: 304 DVYQQFKSIISLPHGIVLVTGPTGSGKTTTLYSSLLEI-QDESTKIITTEDPVEYQLDGI 362 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + +IGL TFA+ LR+ LR DPDV+L+GE+RD ET A+ A+ TGHLV +TLH Sbjct: 363 NQIQVHPKIGL---TFAASLRSILRHDPDVVLVGEIRDKETAENAVQASLTGHLVFSTLH 419 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T AA A R++D +A ++ V++Q+L Sbjct: 420 TNDAAGAFARMIDMGVE------PFLIASTIEGVMAQRLVRKLCPHCKVAYEPKRAELPA 473 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 GR+ ++ELLI T + L EG + + Sbjct: 474 DFPWDDFIAAGGKLHQPTGCRQCRGVGYRGRMGIYELLITTEEIRELAHEGLST--HKIK 531 Query: 303 QTGQQVGMITFQQSYQHRVGEG 324 Q ++ GM+T +Q + G Sbjct: 532 QIAKKNGMLTLRQYGWRKALSG 553 >UniRef50_B9XM22 Type II secretion system protein E n=1 Tax=bacterium Ellin514 RepID=B9XM22_9BACT Length = 583 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 106/382 (27%), Positives = 169/382 (44%), Gaps = 72/382 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDT--PDVEELLREWLD---- 53 + +I+ + K +D+H R+RI G + P + L + Sbjct: 184 VNQIIWEAFKDRATDIHFEPSEDELRIRYRIDGILHQTPMPPQLKRYQAALISRIKVMSG 243 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPT 110 + L ++G+++ + E +R S +G S++LRLL LE+LG Sbjct: 244 MNIAEKRLPQDGRINVRIK-GEEIDIRVSTVPTVYGESVSLRLLTRGKIFLGLEKLGFAP 302 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 V + E++ +G+ LVTG TGSGKST+L A + +N + I+T+E+PVEY Sbjct: 303 VEETAIREIILKPHGIFLVTGPTGSGKSTSLYAFLSTINSVSKR-IITIEEPVEYELKGI 361 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + +IGL TFA GLR LR+DP+VI++GE+RD ET +A+ AA TGHLV +TLH Sbjct: 362 NQIAVRSDIGL---TFAMGLRHILRQDPNVIMVGEIRDLETAEIAIRAALTGHLVFSTLH 418 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T A A RL+D +A S+ AV++Q+L + Sbjct: 419 TNDAPSAFTRLIDMGIE------PFLVASSVEAVMAQRLVRNICPGCKTEQKVERDYLRK 472 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR ++ELL+ + LI + Sbjct: 473 IGFPANDIETAKFWRGVGCEECRQLGYQGRQGIYELLLLNEQIRPLILSRAAA--STIAN 530 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 ++GM T + ++V GR Sbjct: 531 RAMELGMRTLRTDGWNKVKAGR 552 >UniRef50_D2QZD9 Type II secretion system protein E n=4 Tax=Planctomycetaceae RepID=D2QZD9_9PLAN Length = 573 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 104/380 (27%), Positives = 164/380 (43%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTP--DVEELLREWLDD--- 54 + EI+ +++ SD+H+ S R+R+ G +++ P E + L Sbjct: 185 VNEILLEAIELRASDVHIESQPSGLAIRYRVDGMLQSQPIPPEIHRFEAAIVSRLKIMSR 244 Query: 55 --DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT 110 L ++G++ V +R S HG L +R+L L+++G Sbjct: 245 LNIAEKRLPQDGRMKLKVK-GREIDVRVSVIPMIHGEGLVMRILDKGSMVFDLQKIGMEP 303 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 EL+ +G++LVTG TGSGK+TTL + + +N D I+T EDPVEY Sbjct: 304 DTYKVYRELIDLPHGIVLVTGPTGSGKTTTLYSSLIEINT-PDVKIITTEDPVEYQLEGI 362 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + +IGL TFA+ LR+ LR DPDV+L+GE+RD ET A+ A+ TGH+V +TLH Sbjct: 363 NQIQVHHKIGL---TFAASLRSILRHDPDVVLVGEIRDLETAENAIQASLTGHMVFSTLH 419 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T AA A RL D +A ++ AV++Q+L Sbjct: 420 TNDAASAYTRLTDMGVE------PFLVASTVEAVMAQRLVRRLCKHCKQPYDAVRDDVPS 473 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR+ ++ELL+ T + L ++Q Sbjct: 474 DFPWEDLQSRPLFKGVGCRECRNTGYRGRMGIYELLVTTNEIRQL--ACDRASSWKIMQA 531 Query: 305 GQQVGMITFQQSYQHRVGEG 324 + GM + +Q +V G Sbjct: 532 ASKEGMRSLRQDGWKKVLVG 551 >UniRef50_Q0EY30 Type IV pilus biogenesis protein PilB n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY30_9PROT Length = 732 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 97/376 (25%), Positives = 167/376 (44%), Gaps = 66/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ ++K SD+H+ R R+ GR+ L+ + D Sbjct: 188 VNGVIVQAMKIGSSDIHIEPGDKQSVVRLRVDGRLRPMIRFPSKAHPLVVSRIKIMSKLD 247 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 ++G+ + L ++ +R S HG + +R+L L+ L Sbjct: 248 ISNTRTPQDGRARVKM-LGKSYDMRISTLPAMHGEKVVMRILDQGGLALNLDVLCFEETA 306 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + ++ G +LVTG TGSGK+TTL + + ++ Q+ + +++T+EDPVE+ A Sbjct: 307 YKHIRQCIEQPTGAVLVTGPTGSGKTTTLYSFLHHI-QNEEMNLITIEDPVEFQIAGINQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + G MTFA+ LR+ LR+DPDV+++GE+RD ET +AL AA+TGHLVL+TLHT Sbjct: 366 VQVNPKAG---MTFAAVLRSILRQDPDVVMVGEIRDEETAEIALHAAQTGHLVLSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RL+D + LA SL +++Q+L Sbjct: 423 DAPSTVTRLLDMGIE------PSMLASSLNLIVAQRLVRRLCPQCRVESKPTDELIERLG 476 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR+ + E+L + + LI G T ++Q + Sbjct: 477 IPEGVRFYDKAGCKHCMNIGYKGRMGVHEVLYVSDRIRKLIARGATD--RELMQAARDED 534 Query: 310 MITFQQSYQHRVGEGR 325 M+T + + G+ Sbjct: 535 MLTLFEDGMSKALAGQ 550 >UniRef50_Q1IRV6 Type II secretion system protein E n=24 Tax=Bacteria RepID=Q1IRV6_ACIBL Length = 571 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 99/383 (25%), Positives = 168/383 (43%), Gaps = 72/383 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +VK SD+H+ + R+RI G ++ + + + + D Sbjct: 189 VNMILTEAVKKGASDIHMEPYEKEYRVRFRIDGILQTMMNPPMKLRDAIISRVKIMAKLD 248 Query: 55 DQRAILLENGQLDFAV---SLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP 109 L ++G++ + + R S G + LRLL +L+ +LG Sbjct: 249 ISEKRLPQDGRIMLKMNLQGKKKVLDYRVSTLPTLWGEKVVLRLLDKESLRLDMTKLGME 308 Query: 110 TV----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 + + G++LVTG TGSGK+ TL + + LN+ D +I+T EDPVE+ Sbjct: 309 QESLDKFTKAIFKPYGMVLVTGPTGSGKTNTLYSSISQLNK-PDTNIMTAEDPVEFQLHG 367 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 + + +IGL+ FA+ LR+ LR+DP++IL+GE+RD ET +A+ AA TGHLVL+TL Sbjct: 368 VNQVQMKEQIGLN---FAAALRSFLRQDPNIILVGEIRDFETAEIAIKAALTGHLVLSTL 424 Query: 226 HTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------- 268 HT GA + + RL++ +A S+ + +Q+L Sbjct: 425 HTNGAPETISRLMNMGIE------PFLVATSVHLIAAQRLIRRICSNCAEVLDLPPQALI 478 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR L+E++ + LI G + + Sbjct: 479 EAGYSPAESKTVKISKGRGCSNCNNTGYKGRTGLYEVMEIDDEIRELILVGASA--LELK 536 Query: 303 QTGQQVGMITFQQSYQHRVGEGR 325 + + GMIT ++S +V G Sbjct: 537 KKAIEKGMITLRRSGLIKVSLGI 559 >UniRef50_B4U620 Type II secretion system protein E n=3 Tax=Aquificaceae RepID=B4U620_HYDS0 Length = 482 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 99/378 (26%), Positives = 163/378 (43%), Gaps = 72/378 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDDDQ--- 56 + I+ ++K SD+H+ R RI G++ T + + + Sbjct: 105 VNNILLKAIKTGASDIHIEPYEKNVLVRMRIDGKLVVVEELTNGFYQSVLSRIKVIANMN 164 Query: 57 --RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++ + +S + +R S G + LR+L LE++G Sbjct: 165 VAEKRLPQDARFRIKIS-KKEIDIRVSTIPSLFGERVVLRILDQSNTPLDLEEIGLSKEA 223 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++L G+ILVTG TGSGKST+L A + L + +I+T+EDPVEY Sbjct: 224 YEDILDILSRPYGIILVTGPTGSGKSTSLYAFLKRL-KSPSKNIITIEDPVEYQVEGISQ 282 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFASGLR+ LR+DPD+I++GE+RD ET +A+ AA TGHLVL+TLHT+ Sbjct: 283 IQVNPKVGL---TFASGLRSILRQDPDIIMIGEIRDRETAEIAIQAALTGHLVLSTLHTQ 339 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A +V RL D +A S+ +++Q+L Sbjct: 340 NALSSVTRLFDIGIE------PFLIASSIEGLIAQRLVRKICPYCKTSYKPSYVEIKELG 393 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQ-LPHVIQTGQQ 307 +GR+ LFE++ + +LI + + + + IQ Sbjct: 394 LKEGDYTFYKGLGCEHCMQSGYKGRIGLFEVIKADDRLKSLISQNPSWEYIKSHIQ---- 449 Query: 308 VGMITFQQSYQHRVGEGR 325 + ++ G Sbjct: 450 --YKSLLDDGIEKILNGI 465 >UniRef50_B8FQ85 Type II secretion system protein E n=2 Tax=Desulfitobacterium hafniense RepID=B8FQ85_DESHD Length = 586 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 111/377 (29%), Positives = 173/377 (45%), Gaps = 67/377 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ ++ SD+H R+RI G++E V + + D Sbjct: 208 VDFLLRDAIMLGASDVHWEPGKTVMRVRYRIDGKLETKRSFPLGVARNVLARIKIMSGMD 267 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 L ++G+ F V + LR S+ HG + +R+L L+ LG Sbjct: 268 VAERRLPQDGRSSFMVGA-KTIDLRISSLPTVHGEKIVIRILDQDTAQRSLQSLGMSRGV 326 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+K +G+ILV G TGSGK+TTL A++ L +++++EDPVEY Sbjct: 327 EQSIQRLIKEPHGIILVVGPTGSGKTTTLYALLRELVSE-QLNLVSIEDPVEYQLPGVVS 385 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +IGL TFA GLR+ LR+DPDVI++GE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 386 VQVQPKIGL---TFAQGLRSILRQDPDVIMIGEIRDEETARIAIAAALTGHLVLSTLHTN 442 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA+A RL+D +A LR VLSQ+L Sbjct: 443 TAAEAFTRLLDMGIE------PYLVAAVLRGVLSQRLVRRLCEQCKEPWHLDPLEKDAMD 496 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GR+ + ELL+ + +L+ EG++ + + Sbjct: 497 LPESVRQVFRAKGCPKCRGTGYSGRIGIHELLLYHQDIKDLVLEGQSSG--AIEEKAIAK 554 Query: 309 GMITFQQSYQHRVGEGR 325 GMI ++ ++V +G Sbjct: 555 GMIPLRRDGYNKVRQGL 571 >UniRef50_A6C2Q8 Type II secretion system protein E n=3 Tax=Planctomycetaceae RepID=A6C2Q8_9PLAN Length = 582 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 103/378 (27%), Positives = 159/378 (42%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +V+ SD+H+ R+R+ G ++ A + + + D Sbjct: 195 VNYIIYNAVREGASDIHIEPTEQQLRVRYRVDGVLQQALEPPVHLAPAVSSRIKIMASLD 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 L ++G++ + LR S G + +R+L + LEQLG Sbjct: 255 ISERRLPQDGRIHVLME-GRPIDLRVSTLPMPTGEKVVIRILDNRSVNISLEQLGFSSEV 313 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E L NG+ILVTG TGSGKSTTL A + + + ++ T+EDP+EY Sbjct: 314 LEHFTEQLDKPNGIILVTGPTGSGKSTTLYAALNAV-SSIEKNVCTVEDPIEYQLPMINQ 372 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 +IGL +FAS LR+ LR+DPDVI++GE+RD ET ++A+ AA TGHLV +TLHT Sbjct: 373 FQVNEKIGL---SFASILRSLLRQDPDVIMVGEIRDQETGKIAIQAALTGHLVFSTLHTN 429 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL++ + +L L+Q+L Sbjct: 430 DAISAVTRLINMGVDD------YLIGAALNMALAQRLCRKLCPKCKTPYELPKAMQLAVE 483 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ + E+L + +I T + V + Q Sbjct: 484 RIGLDVEEFYRGKGCKRCRNTGFSGRIGVHEILTIDDPLREIITTNPT--VAAVKEYAQN 541 Query: 308 VGMITFQQSYQHRVGEGR 325 GMI + + EG Sbjct: 542 NGMIPLRYDALRKAKEGM 559 >UniRef50_B6BQP9 Type II Secretion PilT n=4 Tax=Proteobacteria RepID=B6BQP9_9RICK Length = 338 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 200/319 (62%), Gaps = 5/319 (1%) Query: 12 KHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQRAILLENGQLDF 68 +SD H+ S P +R G + D+++L+ ++ + A E +LD Sbjct: 12 NKKISDFHIRSGSPLAYRQTGEIIKVADTNVTAQDLKDLISMNCNEAETARFNETHELDS 71 Query: 69 AVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGA 128 AV L+ R R + + +G + LR + S P ++Q P L +++ GL+LVTG Sbjct: 72 AVMLSG-LRFRANFYKTINGPAAVLRRVESKIPDMDQFNLPQALYDIVDFHKGLVLVTGP 130 Query: 129 TGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRA 188 TGSGKSTTLAA+V +N+ ++I+T+EDPVE+++ + ++ RE+G +F++ L+A Sbjct: 131 TGSGKSTTLAAIVNEINKTRTSNIITVEDPVEFIHKDNQSIVSHREVGKQTQSFSAALKA 190 Query: 189 ALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDP 248 ALREDPDVIL+GE+RD ETI LALTAAETGHLV TLHT GA + R++D FP ++++ Sbjct: 191 ALREDPDVILVGEMRDLETISLALTAAETGHLVFGTLHTSGAPSTINRIIDVFPPEQQEQ 250 Query: 249 VRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +R Q++ SL+ V++Q+L + GRV FE++ TP V NLIRE K HQ+P ++QT + Sbjct: 251 IRAQISTSLKMVVTQRLLKTRDGQGRVGAFEIMKCTPPVQNLIREAKIHQIPSIMQTAVR 310 Query: 308 VGMITFQQSYQHRVGEGRL 326 GMIT ++S + V G++ Sbjct: 311 DGMITMEKSLEELVKSGKI 329 >UniRef50_Q1D9E1 General secretory pathway protein E n=17 Tax=Proteobacteria RepID=Q1D9E1_MYXXD Length = 605 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 100/383 (26%), Positives = 161/383 (42%), Gaps = 74/383 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ + K SD+H+ R+R+ G ++ + + + + Sbjct: 221 VNSVLFRAAKERASDIHIEPMERELLVRFRVDGVLQEVIKPPKRYQNAIVSRVKVMGQLN 280 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 L ++G++ ++ + +R S G + +RLL L ++G Sbjct: 281 IAEKRLPQDGRIRIKLA-GRDIDIRLSTIPTSFGERIVMRLLDKTATLLDLAEIGMSQKT 339 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++K +G+ILVTG TGSGK+TTL + +N D +ILT+EDPVEY Sbjct: 340 LESMEAVIKRSHGIILVTGPTGSGKTTTLYGALSKINT-PDLNILTVEDPVEYQLKGIGQ 398 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL TFA GLR+ LR+DPDVI++GE+RD ET +A+ A+ TGHLVL+T+HT Sbjct: 399 MAISPKIGL---TFAQGLRSFLRQDPDVIMVGEIRDKETAEIAIQASLTGHLVLSTVHTN 455 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV RLVD +A SL +L+Q+L Sbjct: 456 DAAGAVTRLVDMGVE------PFLVASSLTGILAQRLVRRVCPDCRVPFEPTDAELKELG 509 Query: 269 ---------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 GR ++E L V L+ + + Sbjct: 510 HSVASFKQRYGVDRIYKASGCPSCNRNGYRGRTGIYEFLPVDDDVRQLVLKNVDA--STI 567 Query: 302 IQTGQQVGMITFQQSYQHRVGEG 324 ++ GM T ++ G Sbjct: 568 KRSATSKGMTTLLDDGARKIALG 590 >UniRef50_B2ULL9 Type II secretion system protein E n=2 Tax=Verrucomicrobiaceae RepID=B2ULL9_AKKM8 Length = 546 Score = 395 bits (1017), Expect = e-109, Method: Composition-based stats. Identities = 107/381 (28%), Positives = 176/381 (46%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 +++++ + K SD+H+ R+R+ G++ + + L Sbjct: 164 VQQMLTDAFKMRASDIHIEPMENRLRIRYRVDGKLVEVATHPKKLLSPIIARLKVMSTTM 223 Query: 55 -DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA--- 108 + ++G++ ++ + LR S+ HG S+ +R+L L QLG Sbjct: 224 SIAEKRMPQDGRIQMSIG-GKQIDLRVSSVPSNHGESIVMRILDKSALVLGLPQLGFFSD 282 Query: 109 -PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 V L+ +G+ILVTG TGSGK+TTL A + ++N+ D I+T+EDPVEY + Sbjct: 283 DEAVFDRLITLPDGIILVTGPTGSGKTTTLYACLNHINR-PDKKIITVEDPVEYELSGIN 341 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 ++ + +IG MTFA+ LRA LR+ P++I++GE+RD ET +A+ A+ TGHLV +TLHT Sbjct: 342 QVMVKADIG---MTFAAALRAMLRQAPNIIMIGEIRDMETASIAINASLTGHLVFSTLHT 398 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A AV RL D R +A S+RA+++Q+L Sbjct: 399 NDAPSAVARLADIGIK------RFLIASSVRAIMAQRLVRKLCDRCKVDGTLTEKQAHTL 452 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GR+ LFE+ V +I E T P + Q Sbjct: 453 NIDMSRLAQGQIKAPHGCDFCRGGGFKGRMGLFEIFEIDDEVRRMINENLTS--PQLRQR 510 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 +++GM T ++ +V G Sbjct: 511 ARELGMRTLREDGVRKVLAGL 531 >UniRef50_P45759 Probable general secretion pathway protein E n=31 Tax=Gammaproteobacteria RepID=GSPE_ECOLI Length = 493 Score = 395 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 106/377 (28%), Positives = 167/377 (44%), Gaps = 69/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ ++K SD+H+ + R+RI G + + LL + D Sbjct: 112 INAILSEAIKETASDIHIETYEKTMSIRFRIDGVLRTILQPNKKLAALLISRIKVMARLD 171 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAP--- 109 + ++G++ + N +R S +G LRLL + L LG Sbjct: 172 IAEKRIPQDGRISLRIGR-RNIDVRVSTLPSIYGERAVLRLLDKNSLQLSLNNLGMTAAD 230 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L L++ +G+ILVTG TGSGKSTTL A++ LN +ILT+EDPVEY Sbjct: 231 KQDLENLIQLPHGIILVTGPTGSGKSTTLYAILSALNT-PGRNILTVEDPVEYELEGIGQ 289 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + M+FA GLRA LR+DPDV+++GE+RD+ET ++A+ A+ TGHLVL+TLHT Sbjct: 290 TQVNTRVD---MSFARGLRAILRQDPDVVMVGEIRDTETAQIAVQASLTGHLVLSTLHTN 346 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A+ AV RL D L+ SL +++Q+L Sbjct: 347 SASGAVTRLRDMGVES------FLLSSSLAGIIAQRLVRRLCPQCRQFTPVSPQQAQMFK 400 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR+A+ E+++ TP + I E Q ++ + Sbjct: 401 YHQLAVTTIGTPVGCPHCHQSGYQGRMAIHEMMVVTPELRAAIHENVDEQ---ALERLVR 457 Query: 308 VGMITFQQSYQHRVGEG 324 ++ +V G Sbjct: 458 QQHKALIKNGLQKVISG 474 >UniRef50_C8W152 Twitching motility protein n=2 Tax=Bacteria RepID=C8W152_DESAS Length = 368 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 135/331 (40%), Positives = 203/331 (61%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 ++ +++ S + + SDLHL S P R+ G ++ P D++ L+ + L Q Sbjct: 16 FHVNQLLKDSKERDASDLHLTSNTPPVLRMSGGLKVLDNYRPLTPEDIKRLVYQVLSPRQ 75 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 +L + +D A+ A R R +A+ QR I+ +R L P LE LG P + L Sbjct: 76 VEVLEQKLSVDLAIGFAGIGRFRVNAYFQRGAITCVMRRLADDIPLLENLGLPESVYALC 135 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 NGL+LVTGATGSGKSTTLAA++ +N+ +I+T+EDP+EY+Y +++ +I QRE+ Sbjct: 136 DLPNGLVLVTGATGSGKSTTLAAVIDRINEKYRHNIITIEDPIEYIYFNRQSIINQRELH 195 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 +FA LR++LR DPDVIL+GE+RD ETIR A+ AAETGHLV +TLH+R A +V R Sbjct: 196 TDVESFADALRSSLRSDPDVILVGEMRDLETIRTAIMAAETGHLVFSTLHSRDAVSSVSR 255 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-DKQEGRVALFELLINTPAVGNLIREGKT 295 ++ FP +E+ +R QL+ SL+AV+SQ+L +GR E+++ TPA+ NLIR GK Sbjct: 256 MIGVFPPEEQAQIRQQLSVSLKAVISQQLLSCAGGKGRALAAEVMVVTPAISNLIRLGKQ 315 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + + TG ++GM T +QS + G + Sbjct: 316 EHIHMALDTGTKLGMQTMEQSLEKLARAGAI 346 >UniRef50_A5F5L4 Type IV pilus assembly protein PilB n=41 Tax=Vibrionaceae RepID=A5F5L4_VIBC3 Length = 562 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 100/377 (26%), Positives = 161/377 (42%), Gaps = 66/377 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +V+ SD+H + R R G + + L + D Sbjct: 186 INQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRLAARIKILSKLD 245 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 L ++G++ +S +R S G + LRLL S +++LG Sbjct: 246 IAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANLDIDKLGYNPQQ 305 Query: 113 PEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L LK G+IL+TG TGSGK+ +L + LN +I T EDPVE + Sbjct: 306 KQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTS-QINISTAEDPVEINLSGINQ 364 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +IG FA LR+ LR+DPDV+++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 365 VQVQPKIGF---GFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTN 421 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA+ V RL + LA SL +++Q+L Sbjct: 422 SAAETVIRLANMGVE------PFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQFA 475 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GRV ++E++ + I + + + + + + Sbjct: 476 FQPNEILYEANAAGCNECTGGYSGRVGIYEVMAFNTELAEAIMQRAS--IHQIERLAKAN 533 Query: 309 GMITFQQSYQHRVGEGR 325 GM T Q+S ++ EG Sbjct: 534 GMQTLQESGLEKLREGI 550 >UniRef50_Q1V0I1 Type II Secretion PilT n=3 Tax=root RepID=Q1V0I1_PELUB Length = 337 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 130/319 (40%), Positives = 200/319 (62%), Gaps = 5/319 (1%) Query: 12 KHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRAILLENGQLDF 68 +SD H+ + WP +R G + D+++L+ ++ + E +LD Sbjct: 12 NKKISDFHIRTGWPLAFRQTGEIHKIQEIVVKEQDLQDLISTNCNETEMKKFSETHELDS 71 Query: 69 AVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGA 128 +V+L+ R R + + G + LR + S P+++Q P VL +++ GL+LVTG Sbjct: 72 SVTLSG-LRFRANFYKTIQGPAAVLRRVESVIPEMDQFDLPQVLYDIVDMHKGLVLVTGP 130 Query: 129 TGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRA 188 TGSGKSTTLAA+V +N+ ++I+T+EDPVE+++ + ++ RE+G TF+S L+A Sbjct: 131 TGSGKSTTLAAIVNEINKTRTSNIITVEDPVEFIHKDLKSIVSHREVGKQTKTFSSALKA 190 Query: 189 ALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDP 248 ALREDPDVIL+GE+RD ET+ LALTAAETGHLV TLHT GA + R++D FP +++ Sbjct: 191 ALREDPDVILVGEMRDLETVSLALTAAETGHLVFGTLHTSGAPNTINRIIDVFPPEQQAQ 250 Query: 249 VRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +R Q++ SL+ V++Q+L K GR A FE++ TP + NLIRE K HQ+P ++QT + Sbjct: 251 IRAQISSSLKMVVTQRLLKTKDGQGRCAAFEVMKCTPPIQNLIREAKIHQIPSIMQTSVR 310 Query: 308 VGMITFQQSYQHRVGEGRL 326 GMIT +S + V G++ Sbjct: 311 DGMITMTKSLEELVKAGKI 329 >UniRef50_Q181B0 Type IV pilus assembly protein n=5 Tax=Clostridium difficile RepID=Q181B0_CLOD6 Length = 561 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 100/378 (26%), Positives = 166/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ +V+ SD+H+ R+RI G + + + + Sbjct: 183 VNNILENAVRMEASDIHIEQSENYMRVRFRIDGMLREYMRMNSAPYKAVISRIKIMSDIN 242 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPT-- 110 + ++G++ V + R S +A+R+L E LG Sbjct: 243 ISEKRIPQDGRIYLKVD-NKPIDFRVSTMPTNRDEKIAMRVLDKSNFMVSKEVLGIDEHG 301 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + EL+ + GLILV G TGSGK+TTL +M+ LN + ++LT+EDP+EY Sbjct: 302 SKIYDELINTPYGLILVVGPTGSGKTTTLYSMLNQLNTE-NRNLLTIEDPIEYELPGVNQ 360 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL TFASGLRA +R+DPD+I++GE+RD+ET +A+ A+ TGHLVL+TLH Sbjct: 361 SQINEKAGL---TFASGLRAFMRQDPDIIMVGEIRDTETAEIAIRASLTGHLVLSTLHAN 417 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL+D + S+ V+SQ+L Sbjct: 418 TAVGAISRLLDMDVES------FLITSSVLGVISQRLTRKICEHCKVSYEADIGEKKALG 471 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR+ +FE+L TP + LI + +++ ++ Sbjct: 472 IDVNESVTIYRGKGCERCNNTGYKGRLGIFEMLEITPEIKELI--DSSANQREILKMARK 529 Query: 308 VGMITFQQSYQHRVGEGR 325 GM++ ++ +V G+ Sbjct: 530 QGMVSLKEDIVKKVLNGK 547 >UniRef50_A5D376 Type II secretory pathway, ATPase PulE/tfp pilus assembly pathway, ATPase PilB n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D376_PELTS Length = 462 Score = 393 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 101/380 (26%), Positives = 170/380 (44%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++A ++ SD+H+ R+RI G + ++ L + D Sbjct: 81 VNDLIAQAISARASDIHIEPQEDRVQVRFRIDGMLREVAALPWSLKFPLAARVKIMANLD 140 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTV- 111 L ++G++ + + LR S A G + +R+ + ++QLG Sbjct: 141 IVEKRLPQDGRIKIRFA-GRDIDLRVSTMATMFGEKVVIRIHDKSVQKHKIDQLGFSAED 199 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+K+ +G+IL+TG TGSGK+TTL A + L + +I+T+EDPVEY+ Sbjct: 200 LCRYRQLIKNSHGMILITGPTGSGKTTTLYATISELCSQ-EKNIVTIEDPVEYVLKGVNQ 258 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 G+ TFA GLRA LR+DPDV+++GE+RD ET +A+ AA TG LVL+T+HT Sbjct: 259 TQVNPGAGI---TFAIGLRAILRQDPDVVMVGEIRDQETASIAVRAATTGQLVLSTMHTI 315 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL+D ++ S+ ++SQ+L Sbjct: 316 DAPGALTRLIDMGVE------PFLISSSVLCIVSQRLVRLCCEFCREAYEPAGDSPERML 369 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR +FE+L T + L+R+ + + +T Sbjct: 370 LDAENGGAVCLYRSRGCEHCGYTGFKGRTGIFEILPLTAEIRRLVRKKASSD--EIRKTA 427 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GMITF++ + G Sbjct: 428 TEQGMITFREDGIKKAMVGL 447 >UniRef50_A0LUI4 Type II secretion system protein E n=4 Tax=Bacteria RepID=A0LUI4_ACIC1 Length = 553 Score = 393 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 98/381 (25%), Positives = 163/381 (42%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ +V+ SD+H+ R+RI G + +++ + L Sbjct: 175 VNLLITQAVQDRASDIHIEPTERDLRVRFRIDGVLHEVMRSPRNIQSGVISRLKIMADMN 234 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 + ++G++ V+ + LR ++ G + +R+L + L LG Sbjct: 235 IAERRVPQDGRMSVTVN-GKKVDLRVASLPTVWGEKVVMRILDTSTALLTLSDLGFAEDN 293 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 G+ILVTG TGSGKSTTL A + + + +++T+EDPVEY Sbjct: 294 YARYSASFTKPYGMILVTGPTGSGKSTTLYATINII-SSVEKNVITVEDPVEYRLPGINQ 352 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR LR DPD++L+GE+RD ET ++A+ AA TGHLVL+TLHT Sbjct: 353 IQTNVKAGL---TFASALRTILRADPDIVLIGEIRDHETAQIAIEAALTGHLVLSTLHTN 409 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL++ + +L VL+Q+L Sbjct: 410 DAPSAVNRLIEMGIE------PFLVGSALDCVLAQRLARRLCEKCKEPYMPTPQSLREAK 463 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GR+AL E++ T + L E + + + + Sbjct: 464 FPWRDGEPLPTLYRAVGCAACAKTGYKGRIALHEVMTVTEEIERLAVERASAE--AIGRV 521 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 ++ GM+T ++ +V G Sbjct: 522 AREQGMVTLREDGLRKVAAGV 542 >UniRef50_B2SSM0 Type IV-A pilus assembly ATPase PilB n=47 Tax=Proteobacteria RepID=B2SSM0_XANOP Length = 577 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 93/379 (24%), Positives = 165/379 (43%), Gaps = 68/379 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +++ SD+H + R RI G ++ + + + L D Sbjct: 199 VNKVLVDAIRRGASDIHFEPYEDDYRVRLRIDGLLKNVAKAPVKLSQRIAARLKVMSQLD 258 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ +S + R S G + LR+L +L ++LG Sbjct: 259 IAEKRVPQDGRIKLNLSKTKQIDFRVSTLPTLFGEKVVLRILDGSAAKLGIDKLGYEPDQ 318 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E + G++LVTG TGSGK+ +L +G LN +I T EDPVE Sbjct: 319 QKLFLEAIHKPYGMVLVTGPTGSGKTVSLYTALGILNDE-TRNISTAEDPVEIRLPGVNQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q + G MTFA+ LR+ LR+DPD+I++GE+RD ET +A+ AA+TGH+VL+TLHT Sbjct: 378 VQQNNKRG---MTFAAALRSFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A Q + RL++ + S+ V++Q+L Sbjct: 435 DAPQTIARLMNMGI------APYNITSSVTLVIAQRLARRLCNNCKRKSTLPEHALLAEG 488 Query: 269 ----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR +++++ T +G ++ EG + + Q Sbjct: 489 FTPEQVANMELYEAVGCDECTEGYKGRTGIYQVMPMTDEIGAIVLEGGNA--MQIAEAAQ 546 Query: 307 QVGMITFQQSYQHRVGEGR 325 ++G+ +QS + +G Sbjct: 547 KIGIRDLRQSALMKASQGV 565 >UniRef50_B2V7T3 Twitching motility protein n=8 Tax=Bacteria RepID=B2V7T3_SULSY Length = 372 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 132/335 (39%), Positives = 207/335 (61%), Gaps = 9/335 (2%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 M ++EI+ +VK SD+HL A + RI+ ++ P D+ + + L + Sbjct: 1 MELDEILTKAVKLGASDIHLKVASKPKVRIKTILQTLDEYNPITVEDMTNFISKILAKSE 60 Query: 57 --RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 +A L++NG++D + S+ R R + + QR ++ALR L ++ P+ E+L P V+ + Sbjct: 61 NKKAELIKNGEVDISYSIPTVSRFRVNIYRQRGTYAIALRALKTNIPRFEELLLPEVIRK 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + + GL+LVTG TGSGKSTTLA+M+ Y N+ + I+T+EDP+EY++ ++ I QRE Sbjct: 121 IAEEARGLVLVTGPTGSGKSTTLASMLDYRNEIFEETIITIEDPIEYVFRDKKAYIVQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 + L F++GLRAALREDPDVI++GE+RD ETI+ AL AAETGH VL+TLHT+ A + Sbjct: 181 VDLDTRDFSTGLRAALREDPDVIMVGEMRDLETIQTALRAAETGHFVLSTLHTQDAKDTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE- 292 R+++ FP +E++ +R LA L+AV+SQ+L K G V E+LINT A+ I + Sbjct: 241 SRIINMFPGEEQNHLRILLAAVLKAVISQRLIPRKDGKGVVPAVEVLINTGAITECIMDP 300 Query: 293 GKTHQLPHVIQTGQQ-VGMITFQQSYQHRVGEGRL 326 K + ++ G++ GM TF Q+ +G + Sbjct: 301 DKLLLINDYMEKGKKMYGMQTFDQAVVDLYNQGLI 335 >UniRef50_Q2SCC2 Tfp pilus assembly protein, ATPase PilU n=58 Tax=Bacteria RepID=Q2SCC2_HAHCH Length = 404 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 113/329 (34%), Positives = 195/329 (59%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M + + + K++ SDL+L + P + G+++ P + E+ +D++QR Sbjct: 1 MEFNQYLTVLAKNDGSDLYLSTGAPPCAKFHGKLKPIDKTPLPPGRIMEIANAIMDEEQR 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ A S+ + R R + F QR+ +S+ R + + P + LG P +L E+L Sbjct: 61 EQFAHELEMNLAYSIPQVGRFRVNIFKQRNEVSIVARNIVTDIPNADSLGLPPILKEVLM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 S+ GLIL GATGSGKST+LAA++ + N ++ HI+T+EDPVE+++ ++ +I QRE+G+ Sbjct: 121 SKRGLILFVGATGSGKSTSLAALIDHRNSNSGGHIITIEDPVEFIHKHKKSIINQREVGV 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ + L+ LR+ PDVIL+GE+RD ET+ AL AETGHL ++TLH + QA++R+ Sbjct: 181 DTRSYHNALKNTLRQAPDVILIGEIRDRETMEHALAFAETGHLCISTLHANNSNQALDRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + ++ + L+ +LRA +SQ+L R A E+L+ TP V LI G Sbjct: 241 INFFPEERRNQLLMDLSLNLRAFVSQRLVPTIDGKRTAAIEILLGTPTVSELILRGDIDG 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++Q + +GM TF + V + ++ Sbjct: 301 IKEIMQKSENIGMQTFDAALFKLVQQEKI 329 >UniRef50_Q3J755 Type II secretion system protein E n=11 Tax=Gammaproteobacteria RepID=Q3J755_NITOC Length = 580 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 157/380 (41%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ +V+ SD+H+ + R+RI G + + Sbjct: 200 VNLLIQRAVESRASDIHIEPFENSLRVRYRIDGVLRDVEAPPARSTAAVISRFKIMAKLN 259 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++G++ + LR S +G S+ LRLL + LG Sbjct: 260 IAERRLPQDGRIQLRIQ-GRELDLRVSTVPTLYGESVVLRLLDKGNVVLDFDSLGFQGST 318 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+ +G+I+VTG TGSGKSTTL + LN D I+T+EDPVEY Sbjct: 319 LERFLHVLEQPHGIIVVTGPTGSGKSTTLYTALHKLNT-PDRKIVTVEDPVEYQLEGINQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TFA LR+ +R+DPDVI++GE+RD ET +A+ +A TGH+VL+TLHT Sbjct: 378 IQVKPQIGL---TFAGALRSIVRQDPDVIMIGEMRDKETAGIAVQSALTGHVVLSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA V RL+D L ++ +L+Q+L Sbjct: 435 DAAGGVTRLLDMGIED------YLLTSTVNGILAQRLVRTLCKHCSEPYEALPELIEELE 488 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR A+ E L+ + + L+ + + + Sbjct: 489 LHRFSQEKPVMLHRAVGCEQCNGIGYHGRAAIMEFLVMSDPIRRLVL--QHTDAGEIQKQ 546 Query: 305 GQQVGMITFQQSYQHRVGEG 324 Q+ GM + H+ G Sbjct: 547 AQKEGMRIMYEDGLHKALSG 566 >UniRef50_Q0AZI9 Type II secretion system protein E n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZI9_SYNWW Length = 417 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 111/380 (29%), Positives = 170/380 (44%), Gaps = 67/380 (17%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD---- 53 + + I+ +V+ SD+H+ R+R+ G + A + + + Sbjct: 35 LLVNSILTQAVEEGCSDIHIEPEQQDIRLRFRLDGELYEAARLPLSLLSPIVSRIKIMAG 94 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAP- 109 D L ++G+ + R S G LALR+L + ++ QLG Sbjct: 95 MDISEKRLPQDGRFRATIE-EREVDFRTSTLPTAWGEKLALRILDRANALTEIRQLGFSS 153 Query: 110 ---TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 L L G++LVTG +GSGK+TTL +++ +N + +I+TLEDPVEY Sbjct: 154 NNQANLLALSHCSQGMVLVTGPSGSGKTTTLYSILTQINS-IEKNIITLEDPVEYTLPGV 212 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + GL TFASGLRA LR+DPDVI++GE+RD ET RLA+ AA TGHLV +TLH Sbjct: 213 NQVQINPKAGL---TFASGLRAILRQDPDVIMVGEIRDRETARLAVQAALTGHLVFSTLH 269 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------- 267 T AA ++ RL D LA SL V+SQ+L Sbjct: 270 TNSAAGSITRLRDMGIED------FLLASSLAGVVSQRLVRKLCCYCRQEYTIEEQLAKK 323 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+AL E+++ + +L+ G++ + + +T Sbjct: 324 LGLPLDIGRVFFRSKGCRACRNTGYRGRIALQEIMLLGSEIRDLLNRGESSE-DRLQKTA 382 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GMI+ + EGR Sbjct: 383 IKNGMISIMLDAITKAREGR 402 >UniRef50_A1SFQ9 Type II secretion system protein E n=1 Tax=Nocardioides sp. JS614 RepID=A1SFQ9_NOCSJ Length = 563 Score = 391 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 103/381 (27%), Positives = 160/381 (41%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ ++ SD+H+ R+RI G + A ++ + L Sbjct: 185 VNLLINQAINDRASDIHIEPTERDMRVRYRIDGVLHDAHRSPKSIQNGVISRLKIMAEMN 244 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAP--- 109 + ++G++ LR + G + R+L + QL + LG Sbjct: 245 IAERRVPQDGRMSVTHQ-GRRIDLRVATLPTVWGEKVVARILDTSNTQLGLDDLGFSNEN 303 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 G+IL TG TGSGKSTTL A + LN+ D +++T+EDPVEY Sbjct: 304 YERYRASYTKPYGMILATGPTGSGKSTTLYATLNLLNR-PDVNVITVEDPVEYRLPGINQ 362 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFAS LR+ LR DPD++L+GE+RD ET ++A+ AA TGHLVL+TLHT Sbjct: 363 VQTNAKAGL---TFASALRSILRSDPDIVLIGEIRDHETAQIAVEAALTGHLVLSTLHTN 419 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL++ + +L AVL+Q+L Sbjct: 420 DAPSAVTRLIEMGIE------PFLVGSALDAVLAQRLCRSLCERCKQAYQPDPAELQRIG 473 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR+AL E++ + V L + V +T Sbjct: 474 FPWAEGAEVPVLYRHVGCSSCSQTGYRGRMALHEVMTVSEEVSRLAVARASTD--EVGRT 531 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 ++ GM T + +V +GR Sbjct: 532 AREQGMTTLKSDGWQKVLQGR 552 >UniRef50_D2L4Z0 Type II secretion system protein E n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4Z0_9DELT Length = 523 Score = 391 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 97/362 (26%), Positives = 161/362 (44%), Gaps = 52/362 (14%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++ SD+HL R+R+ G + + + L D Sbjct: 163 VNNLFMEAIVQKASDIHLSPYEDGLEMRYRVDGILHVVKQVPRKFQAAIISRLKIIANLD 222 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPT-- 110 + ++G++ V + +R + G +R+L Q L G Sbjct: 223 IAERRIPQDGRIRLKVE-GHDYDIRVAVTPTVFGEGAVMRILDKASIQVALADSGFAPTM 281 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 EL+K NG+ILVTG TGSGK+TTL + + ++ + + +T+EDPVEY Sbjct: 282 LAQWLELIKRPNGVILVTGPTGSGKTTTLYSSLNHI-KSPEIKFITVEDPVEYQLRGVDQ 340 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++G MTFAS LR+ LR+DPDV+++GE+RD ET +A+ +A TGHLV +TLHT Sbjct: 341 IQVNAKVG---MTFASALRSILRQDPDVLMIGEIRDFETAEIAVQSALTGHLVFSTLHTS 397 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA A+ RL++ +A +L A L+Q+L Sbjct: 398 DAATAITRLIEMGME------PYLVASTLVASLAQRLVRKLCQACRRRAPDGTWSAPGCE 451 Query: 269 -----KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGE 323 +GR+ +FELL T + L+ E + + +Q G+ + + + + Sbjct: 452 LCGGSGYKGRLGIFELLRMTDPMRRLVLEKSDASVLG--ELARQEGLRSLYEDGMAKAAQ 509 Query: 324 GR 325 G Sbjct: 510 GL 511 >UniRef50_D1BGY1 Type II secretion system protein E (GspE) n=3 Tax=Actinobacteridae RepID=D1BGY1_SANKS Length = 557 Score = 391 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 95/381 (24%), Positives = 154/381 (40%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + IV ++ SD+H+ R+RI G + ++ + + D Sbjct: 179 VNLIVTQAITDRASDIHIEPSEHDLRVRYRIDGVLHEMQRSPKNITGGVISRVKILSDID 238 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 ++G++ + LR + G + +R+L + L+ L Sbjct: 239 IAERRKPQDGRMSVTHN-GRKIDLRVATLPTVWGEKIVMRILDNSTASLDLRDLSFGEEN 297 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E G+ILVTG TGSGKSTTL A + + + +++T+EDPVEY Sbjct: 298 YEVYSEAYNKPYGMILVTGPTGSGKSTTLYATLNAV-SKPEINVITVEDPVEYRLPGINQ 356 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA LR+ LR DPDV+LLGE+RD ET ++A+ AA TGHLVL+TLHT Sbjct: 357 VQVNPKAGL---TFAGALRSILRSDPDVVLLGEIRDHETAQIAIEAALTGHLVLSTLHTN 413 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RLV+ + ++ +++Q+L Sbjct: 414 DAPSAITRLVEMGIE------PFLVGSAIDCIVAQRLARRLCGKCKEPYEPSEVELVAAR 467 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR+AL E++ T + G + + +T Sbjct: 468 FPWTEGEPKPVLHRPGGCTTCSGTGYRGRLALHEVMRVTEDIERHAVAGSSS--AEIAKT 525 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 GM + + +V G+ Sbjct: 526 AVAQGMRSLRDDGWMKVVAGQ 546 >UniRef50_B8FGS0 Twitching motility protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGS0_DESAA Length = 366 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 134/328 (40%), Positives = 211/328 (64%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQRAI 59 ++++ + +H SD+H+ P RI+G R+++ P +L+ E L QR Sbjct: 4 LDKVFNAAAEHFASDIHIAPGEPVVLRIQGQLKRLKSGPLTQEQCRKLILEILTPAQRKQ 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L ++ QLDF L + R RG+A + G+S A R +P L +LG P V+ ++L + Sbjct: 64 LEQDLQLDFVYDLGDVGRFRGNAMFHQAGMSAAFRFIPPWISSLYELGLPPVVEKVLDNH 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GLILVTGA G GKSTT+AAMV Y+N H+LT+EDP+E+++ ++ ++ QR++G Sbjct: 124 QGLILVTGAAGQGKSTTMAAMVDYINTKRSHHVLTVEDPIEFVHPYKKAVVNQRQLGEGT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +++A+ LRAALREDPDVI++GELRD ETI LA++AAETGHLV+ TL A + ++R++D Sbjct: 184 LSYANALRAALREDPDVIMIGELRDLETISLAISAAETGHLVIGTLACGSAPKTIDRIID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQL 298 S+PA E++ +R L+ L+AV++Q+L + + E+LI T + NLIREGK Q+ Sbjct: 244 SYPAGEQNQIRAMLSEGLKAVVTQRLIPNMNGKTMELAVEVLIVTLPISNLIREGKVFQI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 P ++QT ++VGM++ S V +G++ Sbjct: 304 PSIMQTAKRVGMVSMDDSLIQLVEDGKV 331 >UniRef50_C4ZCI9 Predicted ATPase involved in pili biogenesis, PilT-like protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZCI9_EUBR3 Length = 360 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 133/329 (40%), Positives = 203/329 (61%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M + +I+ + + N SD+H+ P RI G++ + + LL + + + Sbjct: 9 MQIVDILKAAQQQNSSDIHIVPGNPVMLRIDGKLVPQGNQVLTNVETDNLLSPIVPQELK 68 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 L E G+LDFA S+ R+R + F QR + ALR+L P +QLG P + L Sbjct: 69 DELKEKGELDFAFSVEGFSRVRANVFRQRGSYAAALRILSYDVPTPQQLGIPQSVVNLTT 128 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 GL+LVTGATGSGKSTTLA+++ + +I+TLEDP+EYL++ +R +++QRE+G Sbjct: 129 KMRGLVLVTGATGSGKSTTLASLIDVIASRDSKNIITLEDPIEYLHSRRRSIVEQREVGK 188 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++A+ LRAALR+DPDVIL+GE+RD ETI A+TAAETGHLV +TLHT ++ A++R+ Sbjct: 189 DTLSYAAALRAALRQDPDVILVGEMRDLETISTAITAAETGHLVFSTLHTNSSSDAIDRM 248 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 +D FP ++ +R QL+G L +++Q L GR+A FE+L+ A+ NLIRE K Q Sbjct: 249 IDVFPPHQQQQIRVQLSGVLEGIVAQHLLPMVNGGRIAAFEVLLANNAIRNLIREAKAFQ 308 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P +IQT ++ GM+ +G + Sbjct: 309 IPSIIQTSKREGMMMMDDCILQYYSQGLI 337 >UniRef50_P31742 General secretion pathway protein E n=23 Tax=Gammaproteobacteria RepID=GSPE_XANCP Length = 567 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 95/379 (25%), Positives = 158/379 (41%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ +V+ SD+H+ R+R+ G + + + + Sbjct: 188 VNLVIQHAVELRASDIHIEPFESRLKVRYRVDGVLVEGESPPAKLTAAVISRIKIMAKLN 247 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 L ++G++ V + LR S HG S+ +RLL +LG Sbjct: 248 IAERRLPQDGRIMLRVQ-GKELDLRVSTVPTAHGESVVMRLLDRETVVFDFYKLGFTEDF 306 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++L+ +G++LVTG TGSGK+TTL + LN D I+T+EDPVEY Sbjct: 307 LPQFRKVLEQPHGIMLVTGPTGSGKTTTLYTALSQLNTS-DVKIITVEDPVEYQIEGINQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL FA+ LR+ +R+DPD+I++GE+RD ET R+A+ +A TGHLVL+TLHT Sbjct: 366 IQAKPQIGLD---FANALRSIVRQDPDIIMIGEMRDLETARIAIQSALTGHLVLSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA + RL+D L ++ +L+Q+L Sbjct: 423 NAAGGITRLLDMGVED------YLLTSTINGILAQRLVRKLDLANAERYAASPEEIERFD 476 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + E L+ + + + + Q Sbjct: 477 LRRLQPDGEIFLYRPRATAAAPTGYLGRTTIVEFLVMNDELRRAVMRR--AGMGEIEQLA 534 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ GM T + + G Sbjct: 535 RKSGMRTMYEDGLSKALRG 553 >UniRef50_C0A4E0 Type II secretion system protein E n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=C0A4E0_9BACT Length = 574 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 172/380 (45%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + + + +++ SD+HL + R+RI G + ++ + + Sbjct: 193 VYQTILEAIQRRASDIHLEPMEKRFRVRYRIDGVLIEVDGPPKRLQLAVISRVKIMANIS 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ S + LR S+ HG S+ +R+L QL QLG + Sbjct: 253 IAEKRIPQDGRIQINFS-GKQIDLRVSSLPTAHGESIVMRILDKEGLQLGLPQLGFMSDD 311 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +++ +G+ LVTG TGSGK+TTL + + ++N+ D ++T+EDPVEY + Sbjct: 312 QATMEKIISMPDGIFLVTGPTGSGKTTTLYSCLHFINK-PDRKLITVEDPVEYQLSGINQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + E+G MTFAS LRA LR+ P+++++GE+RD ET +A+ A+ TGH+V +TLHT Sbjct: 371 VPVRHEVG---MTFASALRAMLRQAPNIVMVGEIRDLETAEIAINASLTGHMVFSTLHTN 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL+D ++ SLRAV++Q+L Sbjct: 428 DAPGAVTRLIDIGVK------PFLVSTSLRAVMAQRLVRSICKKCIKPYTPDARELRSLN 481 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR +FE+ I + +I + + + Sbjct: 482 ITPQQAAGATFMKGTGCTECHNTGCRGRKGIFEIFIVNDELQRMIYDNSGS--SRLREKA 539 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + +GM T ++ +V G Sbjct: 540 RSLGMRTMREDGIRKVLAGI 559 >UniRef50_A8ZWZ6 General secretory pathway protein E n=2 Tax=Deltaproteobacteria RepID=A8ZWZ6_DESOH Length = 570 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 115/380 (30%), Positives = 178/380 (46%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + IVA SVK SD+H+ + R+R+ G + ++ L + + Sbjct: 192 VNHIVAQSVKAEASDIHIEAYQDTFKIRYRVDGILYDFLSPPKRIQPALVSRIKVMAKMN 251 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAP--- 109 L ++G++ + + +R S+ G L LRLL S L+++G Sbjct: 252 IAEKRLPQDGRMQVRLG-DKEVDIRVSSIPITAGERLVLRLLNKASSMLGLQEIGFSRQT 310 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L++ NG+ILVTG TGSGK+TTL A + +N D +I+T+EDPVEY + Sbjct: 311 FDLFSRLIRYSNGIILVTGPTGSGKTTTLYAALSTINT-PDINIITIEDPVEYQVSGINQ 369 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++IGL TFA GLR+ +R+DPDVIL+GE+RD ET +A+ +A TGHLV +TLHT Sbjct: 370 IQVNQKIGL---TFARGLRSIVRQDPDVILIGEIRDQETADIAVQSALTGHLVFSTLHTN 426 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 +A AV RLVD L+ S+ AV++Q+L Sbjct: 427 DSASAVTRLVDIGVE------PFLLSSSVIAVIAQRLVRVLCPRCKEAYVPDDSAILSIG 480 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+A+FE+L+ + ++ TH + Sbjct: 481 ASVELFAGKTIYRKTGCDHCLGTGYSGRIAIFEILVMDEKIKKMVLT--THDSGRIEAAA 538 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GMIT +Q H+V +G Sbjct: 539 VKHGMITLRQDGIHKVLDGV 558 >UniRef50_B4ST75 Type IV-A pilus assembly ATPase PilB n=56 Tax=Proteobacteria RepID=B4ST75_STRM5 Length = 577 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 91/380 (23%), Positives = 163/380 (42%), Gaps = 69/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +++ SD+H + R RI G ++ + + + L D Sbjct: 198 VNKVLVDAIRKGASDIHFEPYEDDYRVRLRIDGLLKMVARAPVKLNQRIAARLKVMAQLD 257 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ +S ++ R S G + LR+L +L ++LG Sbjct: 258 IAEKRVPQDGRIKLNLSKSKQIDFRVSTLPTLFGEKVVLRILDGSAAKLGIDKLGYEPDQ 317 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + G++LVTG TGSGK+ +L +G LN +I T EDPVE Sbjct: 318 QKLFQDAIHKPYGMVLVTGPTGSGKTVSLYTALGILNDE-TRNISTAEDPVEIRLPGVNQ 376 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q + G MTFA+ LR+ LR+DPD+I++GE+RD ET +A+ AA+TGH+VL+TLHT Sbjct: 377 VQQNNKRG---MTFAAALRSFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTN 433 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A Q + RL++ + S+ V++Q+L Sbjct: 434 DAPQTIARLMNMGI------APYNITSSVTLVIAQRLARRLCGNCKRRSTLPEHALLAEG 487 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR +++++ T + ++ G + + Sbjct: 488 FTQAQLDAGIELYEAVGCDECTEGYKGRTGIYQVMPMTDEIATIVLAGGNA--LQIAEAA 545 Query: 306 QQVGMITFQQSYQHRVGEGR 325 QQ+G+ +QS + G Sbjct: 546 QQIGVNDLRQSALKKAAAGV 565 >UniRef50_C1A6T5 Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6T5_GEMAT Length = 444 Score = 390 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 131/331 (39%), Positives = 191/331 (57%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEE----LLREWLDDDQ 56 M +E I+ +V SD+H+ + R RI GR+ E+ L ++D Sbjct: 1 MAIERIIKAAVDRGASDVHIKAGDVVRARIDGRLVVLTKQALTAEQTRAIALHLMVNDTD 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 RA + D + + R R + QR S+ +R++P P + L P+VL + Sbjct: 61 RANIDTLKDHDCSWATPGVGRFRVNIMRQRSAHSIVMRVIPEQVPTVSSLHLPSVLTRIA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +E G++LVTG TGSGKS+++AA+V +N + HILTLE+P+E+++A R + QRE+G Sbjct: 121 HTERGMVLVTGVTGSGKSSSMAALVHEINASYEKHILTLENPIEFIHADLRSSVTQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + TF GLRAALR+DPDVIL+GE+RD+ETI A+ AAETGHL+++TLHT A + R Sbjct: 181 IDTDTFRMGLRAALRQDPDVILIGEMRDAETIDTAMKAAETGHLLISTLHTPDAQSTILR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKT 295 +V FP +E+ VR +LA SL AV+SQ+L K GRV E++I T + +LI EG Sbjct: 241 IVAMFPPEEQLVVRTRLAESLHAVVSQRLLPRKNGQGRVVAAEVMIVTSTIRDLIAEGNI 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ I G Q GM TF Q V + Sbjct: 301 AEIRDYIADGAQYGMQTFDQHLAELVTTDEI 331 >UniRef50_C3WB33 Twitching motility protein n=2 Tax=Fusobacterium RepID=C3WB33_FUSMR Length = 345 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 131/329 (39%), Positives = 211/329 (64%), Gaps = 4/329 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M EE++ + + SD+HL +R+ G + + + ++ L + +R Sbjct: 8 MLFEELLTSAREQRASDIHLVYGELPTFRVNGELIKIGDELVNKRFLSLIVDLVLSERER 67 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 I +N +LD + + N R RG+ +R I +++RL+ + +E+LG P +L +L++ Sbjct: 68 NIFYQNRELDCSFEDSNNLRYRGNFHWERGNIGISIRLIENSIKSMEELGLPKILKKLIE 127 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 S+ GLIL+TG +GSGKSTTLA+MV LN + +I+TLEDP+EYL+ S++ LI+QREIG Sbjct: 128 SKKGLILITGPSGSGKSTTLASMVEELNSTKNLNIITLEDPIEYLFKSKKSLIRQREIGR 187 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +FA GL++ LR+DPDVI++GELRD E+I ALTA+ETGHLVL TLHT A++ + R+ Sbjct: 188 DTHSFAQGLKSVLRQDPDVIMVGELRDRESIAAALTASETGHLVLGTLHTNSASETISRI 247 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 VD FP +E++ +R +LA +L+ V+SQ+L K+ R +E+L++ PAV NLI K +Q Sbjct: 248 VDVFPTEEQNEIRVKLATTLKGVVSQRLVRTKER-RRGAYEILLSIPAVSNLILGNKLNQ 306 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + VI++ +++GMI + + + + Sbjct: 307 IDSVIESNKKMGMILMRNYLEDLYSQNII 335 >UniRef50_P37094 Type IV pilus assembly protein pilF n=83 Tax=cellular organisms RepID=PILF_NEIGO Length = 558 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 84/383 (21%), Positives = 157/383 (40%), Gaps = 72/383 (18%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++ +++ SD+H R+R+ G++ V L + D Sbjct: 176 IHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPIAVRGQLASRIKVMSRLD 235 Query: 55 DQRAILLENGQLDFAVSLAEN-QRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPT- 110 + ++G++ R S G + +R+L S L +QLG Sbjct: 236 ISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMRILNSDAASLNIDQLGFEPF 295 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 +L E + G++LVTG TGSGK+ +L + LN +I T EDP E Sbjct: 296 QKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNTE-SVNIATAEDPAEINLPGIN 354 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFA+ L++ LR+DPD+I++GE+RD ET +A+ AA+TGH+V +TLHT Sbjct: 355 QVNVNDKQGL---TFAAALKSFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMVFSTLHT 411 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A + R+++ +A S+ +++Q+L Sbjct: 412 NNAPATLSRMLNMGV------APFNIASSVSLIMAQRLLRRLCSSCKQEVERPSASALKE 465 Query: 269 --------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVI 302 +GR ++E++ + + +I T ++ Sbjct: 466 VGFTDEDLAKDWKLYGAVGCDRCRGQGYKGRAGVYEVMPISEEMQRVIMNNGTE--VGIL 523 Query: 303 QTGQQVGMITFQQSYQHRVGEGR 325 + GM+ +++ ++ +G Sbjct: 524 DVAYKEGMVDLRRAGILKIMQGI 546 >UniRef50_A6M148 Type II secretion system protein E n=18 Tax=Clostridiaceae RepID=A6M148_CLOB8 Length = 564 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 103/378 (27%), Positives = 165/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 ++ + SV+ SD+H+ R+RI G+++ + L + Sbjct: 184 VDYLFRNSVEMKTSDIHIEPFENEIRIRYRIDGKLQTVNTLGIESLGPLVTRIKILAGLN 243 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTV- 111 + ++G++ F V LR S +G + +R+L + +QLG Sbjct: 244 IAEKRIPQDGRIMFEVD-GAQVDLRVSILPVVNGEKIVIRILNTNGSILSKKQLGMSEEN 302 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L ++ + +G+ILVTG TGSGKSTTL +++ LN + +I+T+EDPVEY Sbjct: 303 IHRLNRIIGNPHGIILVTGPTGSGKSTTLYSILNELNSN-SVNIITVEDPVEYTMNGINQ 361 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFASGLR+ LR+DPD+I++GE+RD ET +A AA TGHLVL+TLHT Sbjct: 362 VSVNEKAGL---TFASGLRSILRQDPDIIMIGEVRDEETAEIATRAAITGHLVLSTLHTN 418 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A ++ RL+D ++ S+ V++Q+L Sbjct: 419 DAPSSIIRLIDMGIK------PYLVSTSVVGVIAQRLVRKICNNCKEAYEASEYEKEVLE 472 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GRV ++E++ T I G + + Sbjct: 473 KNINEPLTIYRGAGCGYCNNTGYSGRVGIYEIMEVTRDHREAISSGANTD--DLRDISVR 530 Query: 308 VGMITFQQSYQHRVGEGR 325 GM T + + V GR Sbjct: 531 KGMKTLESECKDLVIGGR 548 >UniRef50_A5FPX9 Twitching motility protein n=4 Tax=Dehalococcoides RepID=A5FPX9_DEHSB Length = 371 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 130/331 (39%), Positives = 199/331 (60%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP----FDTPDVEELLREWLDDDQ 56 M++ +++ + + SDLHL + P R+RG +EA D++ + ++ Sbjct: 1 MDVIKLIYEAEEKKGSDLHLVAQSPPLVRVRGDLEALNGYEQLQPADIKTAFEQLTTHEE 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R + +LDF SL RLR +A QR ISLA+RLLP + P + +L P + +L+ Sbjct: 61 RETFYQEWELDFGYSLDGVGRLRCNAAMQRGAISLAIRLLPPNIPTISELELPDICQKLV 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 GL++VTG TGSGKSTTLAAM+ +LN H++T+EDP+EY++ +C + QR++G Sbjct: 121 TKPRGLVIVTGPTGSGKSTTLAAMIQHLNNTESKHVVTIEDPIEYVHPCIKCAVTQRQLG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 ++F L+ LR++PDVI++GE+RD +T LT AETGHLVL+T H A QA+ER Sbjct: 181 SDTLSFGHALKHVLRQNPDVIMVGEMRDLDTAAAVLTIAETGHLVLSTSHAPSAYQALER 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIREGKT 295 ++D FP E+ + +LA + VL Q L +GR+ E+++ +PAV NLIREGK Sbjct: 241 IIDLFPPHERHLAQTRLASLIEGVLCQTLIPRSNTDGRIVAVEIMLGSPAVRNLIREGKF 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +QLP+VI+T GMIT ++ + + Sbjct: 301 YQLPNVIRTSHDEGMITMDEALVELYRQQVI 331 >UniRef50_Q00512 General secretion pathway protein E n=10 Tax=Proteobacteria RepID=GSPE_PSEAE Length = 502 Score = 388 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 104/378 (27%), Positives = 167/378 (44%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +++ N SD+HL + R+R+ G + ++ LL + D Sbjct: 126 INAILGEAIRENASDIHLETFEKRLVVRFRVDGVLREVLEPKRELAALLVSRIKVMARLD 185 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTVL 112 + ++G++ V +R S +G + LRLL L+ LG Sbjct: 186 IAEKRIPQDGRISLRVG-GREVDIRVSTLPSANGERVVLRLLDKQAGRLNLQHLGMSERD 244 Query: 113 PELL----KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L+ + +G++LVTG TGSGK+TTL A + LN +ILT+EDP+EY Sbjct: 245 RKLMDETVRKPHGILLVTGPTGSGKTTTLYASLTTLN-DRTRNILTVEDPIEYHLEGIGQ 303 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 304 TQVNAKVD---MTFARGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTLHTN 360 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RLVD L+ S+ VL+Q+L Sbjct: 361 SAIGAITRLVDMGIE------PFLLSSSMLGVLAQRLVRVLCPACKEPYRADEAECALLG 414 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR ++EL++ + +LI + Q + + + Sbjct: 415 VDPAAPPTLHRARGCGECHQHGYRGRTGIYELVVFDDHMRSLIHNESSEQ--EMTRHART 472 Query: 308 VGMITFQQSYQHRVGEGR 325 G + + + +V EG Sbjct: 473 SG-PSIRDDGRRKVLEGV 489 >UniRef50_A8URM8 Putative uncharacterized protein n=3 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URM8_9AQUI Length = 552 Score = 388 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 102/386 (26%), Positives = 163/386 (42%), Gaps = 76/386 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ + + +D+H+ +RI G + ++ L + D Sbjct: 169 VDLFMNEGIIERATDVHISPESLASHVFYRIDGVLHHYFSIPAELHPSLVSRVKIISGMD 228 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTV- 111 L ++G + L E+ +R S +G ++ +RLLP L+ LG Sbjct: 229 ISEQRLPQDGGFSYTF-LGESYDVRASTLPTAYGENVVMRLLPKNLSLFNLKNLGFEEDI 287 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E++ G+ILVTG TGSGK+TTL A + +N +ILT+EDP+EY + + Sbjct: 288 LQEFEEVISKPYGMILVTGPTGSGKTTTLYASLRRINSLR-KNILTVEDPIEYRFPFIKQ 346 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + G TFA +R LR+DPDVIL+GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 347 TQVNEKAG---YTFAKAVRHFLRQDPDVILVGEIRDEETAEMAVRAAITGHLVLSTLHTN 403 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RL+D + +A + A+ +Q+L Sbjct: 404 DAVSTIPRLIDLKVKE------YMVASGVLAISAQRLIRKICMFCREAYKTTKEELKAFG 457 Query: 268 ----------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 GRVA+ ELL +G++I G Sbjct: 458 FSEESLDKYVDKDELTLFRGKGCEHCRGTAYLGRVAVVELLRVDEEIGDMIVRGYPP--L 515 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGR 325 ++Q ++ GM T ++ +V +G Sbjct: 516 AILQRAKEKGMRTLKEDGLLKVLKGV 541 >UniRef50_A1U404 Type II secretion system protein E n=8 Tax=Gammaproteobacteria RepID=A1U404_MARAV Length = 579 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 161/377 (42%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A +V+ SD+H+ R+R+ G + + + + + D Sbjct: 193 VNNVLAKAVEAGASDVHIEPGEEFFIIRYRVDGVLHSQMTQSASRFPAVASRIKLISGMD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTVL 112 + L ++G++ + + +R S G S+ +RLLP LE LG Sbjct: 253 IAESRLPQDGRISTRLG-GQEMDIRVSTAPCSFGESVVMRLLPKNRESLSLESLGMEPDH 311 Query: 113 PELLKS----ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L++S NG++LVTG TGSGKSTTL + + L ++T+EDPVE+ Sbjct: 312 LKLMRSVLGFSNGIVLVTGPTGSGKSTTLYSGLSELVDGRQ-KLITVEDPVEFQVRGVTQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IG TFA LRA LR+DPD+I++GE+RD ET +A+ +A TGHLVL+TLHT Sbjct: 371 IQANGDIG---YTFARALRAILRQDPDIIMIGEIRDLETAEIAIQSALTGHLVLSTLHTN 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A RLVD +A ++AV +Q+L Sbjct: 428 DALSAFTRLVDMGVE------PYLVAAPVKAVQAQRLVRRACPNCSEPASPPESLWKPLA 481 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ ++E++ T + L+ + + + + Sbjct: 482 GDWIKNPAFVEPKGCERCHGTGYRGRLGIYEIIPATEELQTLVADN--ADISDLRLWAAR 539 Query: 308 VGMITFQQSYQHRVGEG 324 G Q + G Sbjct: 540 HGHRNLLQDGLIKAARG 556 >UniRef50_C4L4L3 Type II secretion system protein E n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L4L3_EXISA Length = 556 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 96/378 (25%), Positives = 163/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ ++ SD+H R+RI G + ++ ++ L D Sbjct: 175 VNQLFLSAIDQRASDIHFDPHEKQLHVRFRIDGDLRTETVYPKKIQSVMLTRLKVMSNLD 234 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA---- 108 + L ++G++ + + R S +G + +R+L S L +LG Sbjct: 235 ITESRLPQDGRIKYTLR-NRAYDFRVSTLPTMYGEKIVIRVLDSSQGLTDLTKLGFGERN 293 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++LK NG+IL+TG TGSGKS+TL A + LN +I+T+EDPVEY Sbjct: 294 EQAYRDMLKRPNGIILITGPTGSGKSSTLYASLKELNDE-TKNIITVEDPVEYQLDGINQ 352 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFASGLR+ LR+DP+++++GE+RD+ET +A+ A+ TGHLVL+TLHT Sbjct: 353 VQVNSKVGL---TFASGLRSILRQDPNIVMVGEIRDTETAEIAIRASLTGHLVLSTLHTN 409 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RLVD +A S +++Q+L Sbjct: 410 SAISSITRLVDMGVE------PFLVAASTTGLVAQRLVRRVCRDCGQVEPVSKSERSLFD 463 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+A+ E++ + +I T ++ + Sbjct: 464 AEGVHIDHIVRGKGCASCNFTGYRGRLAIHEVVPIDEGLRRMIMNQATE--SEMVDYAKS 521 Query: 308 VGMITFQQSYQHRVGEGR 325 G + +V G Sbjct: 522 QGATFLLEDGLEKVAAGL 539 >UniRef50_Q1D8Z6 Type II/IV secretion system protein n=10 Tax=Deltaproteobacteria RepID=Q1D8Z6_MYXXD Length = 615 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 94/380 (24%), Positives = 156/380 (41%), Gaps = 71/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ + + SD+H+ R RI G + V + + D Sbjct: 236 VDYLLRYAFDNRASDIHIEPKRTTSVVRLRIDGVLHPVHTLPAPVHPPIVSRVKMLARID 295 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 ++G++ LR S G + +R+ + QLG Sbjct: 296 ISERRKPQDGRIKTE-RDGREVELRVSTLPTAFGEKVVIRIFDPETLVQDIAQLGFEPDE 354 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +GLILVTG TGSGK+TTL + + L D ++ T+EDP+E ++ + Sbjct: 355 KSAFESWIDQPHGLILVTGPTGSGKTTTLYSALKALA-GPDVNVTTIEDPIEMVWDAFNQ 413 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q ++GL FA LR LR+DPDVI++GE+RD ET A+ +A TGHLVL+TLHT Sbjct: 414 VQVQPKVGLD---FAGALRHILRQDPDVIMVGEIRDPETAENAIQSALTGHLVLSTLHTN 470 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV R+ D LA SL V++Q+L Sbjct: 471 DALGAVARMRDLGVPS------FLLAQSLLGVMAQRLLRRVCSHCAQETTLTPDELLALQ 524 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR +FE++ + + +LI + ++ Sbjct: 525 APLPLLPGGVRLLKGAGCVRCRGTGFVGRTGVFEIVTSAGELRDLIAREAPY--SQMVDA 582 Query: 305 GQQVGMITFQQSYQHRVGEG 324 ++ GM T +++ ++ +G Sbjct: 583 ARRSGMRTLREAAVRKLAQG 602 >UniRef50_A1TTE0 Type IV-A pilus assembly ATPase PilB n=3 Tax=Comamonadaceae RepID=A1TTE0_ACIAC Length = 578 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 86/380 (22%), Positives = 155/380 (40%), Gaps = 69/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ + SDLH + R+RI G + ++E L + D Sbjct: 199 LHKMLLDAFNMRASDLHFEPYEHQYRVRFRIDGELREIASPPIAIKEKLASRIKVISRLD 258 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ V R S G + +R+L +L + LG Sbjct: 259 ISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVIRILDPSSAKLGIDALGYEPEE 318 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + G+ILVTG TGSGK+ +L + LN+ +I T EDP E Sbjct: 319 KERLLHAIGRPYGMILVTGPTGSGKTVSLYTCLNLLNK-PGVNIATAEDPSEINLPGVNQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA+ L++ LR+DPD+I++GE+RD ET +++ AA+TGHLVL+TLHT Sbjct: 378 VNVNEKAGL---TFATALKSFLRQDPDIIMVGEIRDLETADISIKAAQTGHLVLSTLHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A + R+ + +A S+ + +Q+L Sbjct: 435 DAPTTLTRMRNMGI------APFNIASSVILITAQRLARRLCPACKAPADIPHETLLEAG 488 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GRV +++++ + + +I + + + Sbjct: 489 YREEDIDGSWVTYRPVGCSACNNGYKGRVGIYQVMPVSEEIQRIILRDGSA--LEIAEQA 546 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + G+ + ++S H+ G Sbjct: 547 KAEGVRSLRESGLHKARMGL 566 >UniRef50_B3PF17 General secretion pathway protein E n=8 Tax=Proteobacteria RepID=B3PF17_CELJU Length = 524 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 110/378 (29%), Positives = 165/378 (43%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ +V+ SD+HL R+RI G + P++ +L L D Sbjct: 148 INAILSQAVREGASDIHLEPFEDRVSVRFRIDGVLTEVLSPKPELAPVLVSRLKVMARLD 207 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 L ++G++ ++ +R S G + LRLL +LEQL P Sbjct: 208 IAEKRLPQDGRITVRLA-GHAVDIRVSTIPSAFGERIVLRLLDQAAGQLKLEQLNMPRHV 266 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L +G+ILVTG TGSGK+TTL A + ++N +ILT+EDPVEYL Sbjct: 267 MERFAKNLLKPHGIILVTGPTGSGKTTTLYAGLSHINT-RSRNILTIEDPVEYLLPGIGQ 325 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 326 TQVNTKVD---MTFARGLRAILRQDPDVVMVGEIRDGETAEIAIQASLTGHLVLSTLHTN 382 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL D LA SL V++Q+L Sbjct: 383 TAIGAVLRLKDMGVE------PFLLASSLEVVMAQRLVRLLCSHCKEQYVPSDAERDMLK 436 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR ++EL+ + +LI E Q ++ ++ Sbjct: 437 LPANTSIYRPAASGCKHCNHQGYRGRKGIYELIEINERLRHLIHEQAGEQ--ELLTEARK 494 Query: 308 VGMITFQQSYQHRVGEGR 325 + + V +G Sbjct: 495 H-SPSISDDGRQCVLDGI 511 >UniRef50_A8ZYV7 Type II secretion system protein E n=11 Tax=Deltaproteobacteria RepID=A8ZYV7_DESOH Length = 577 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 102/379 (26%), Positives = 162/379 (42%), Gaps = 69/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A +V+ SD+H+ R R+ G + P + + L D Sbjct: 200 VNALLAQAVRQGASDIHISPEKRYVQVRLRVDGVLHEVPAPPKTLFLSIVSRLKILANLD 259 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA---- 108 + + ++G+ + + +R S +G ++ LRLL + L+QLG Sbjct: 260 ISVSRIPQDGRFTVKIE-NKEINIRVSTIPTIYGENVVLRLLDTSGGVYTLDQLGMASED 318 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L ++ G+IL TG TGSGKST+L AM+ +N+ D +I+TLEDPVEY R Sbjct: 319 QEKLKRNIQKPYGMILATGPTGSGKSTSLFAMINRINK-PDINIITLEDPVEYRIEKIRQ 377 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 R G MTFASGLR+ LR+DPDVI++GE+RD ET ++A AA TGH+V +T+HT Sbjct: 378 AQLNRRAG---MTFASGLRSILRQDPDVIMVGEIRDGETAQVATQAALTGHMVFSTVHTN 434 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A+ R +D ++ + ++Q+L Sbjct: 435 DAAGAITRFIDMGVE------PFLVSSVMLVSMAQRLVRKVCEDCAEPYQPPHEALVFMG 488 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR ++E+L V +I T + + Sbjct: 489 LENAKKATFKRGKGCAYCMNTGYRGRTGIYEILEIDDDVREMIVSRATS--HQITRAAVT 546 Query: 308 VG-MITFQQSYQHRVGEGR 325 G + T +Q + G Sbjct: 547 AGKLQTLKQDAARKAALGI 565 >UniRef50_Q1K4H3 Twitching motility protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K4H3_DESAC Length = 481 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 137/329 (41%), Positives = 201/329 (61%), Gaps = 4/329 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRA 58 +E+ ++ + + SDLH+ + P R G + + + E LL LD DQR+ Sbjct: 127 TLEDYLSFARRQGASDLHINAGSPPLLRKDGVLMTLEREPFTAQETEALLFSALDGDQRS 186 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 +L E LD + R R Q G A R++ P EQL P L +L + Sbjct: 187 LLYEQLALDTCCEFSGLGRYRTCFAKQSRGWDGAFRIVDQTIPTFEQLQLPMHLKQLTEY 246 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 GL+LV G GSGK+TTLAAM+ +NQH + HI+T+EDP+EY+++++ I QR++G H Sbjct: 247 HQGLVLVAGPAGSGKTTTLAAMIQLINQHREDHIITMEDPIEYVHSAEMSHISQRQVGDH 306 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 M+F++ LRAALREDPDVI++GELRD ET LA++AAETGHLV A+LHT GAAQ + R++ Sbjct: 307 TMSFSAALRAALREDPDVIMIGELRDRETATLAISAAETGHLVFASLHTTGAAQTISRIL 366 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQ 297 D FPA ++ VR+ ++ S+R ++ Q+L K+ GRV E++ N A+GNLIRE + Q Sbjct: 367 DFFPADQQGQVRSMISESIRGIVCQRLMPRKEGEGRVLALEIMYNNTAIGNLIREDRMFQ 426 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 LP ++Q + GM + S Q V E ++ Sbjct: 427 LPTMMQINRDKGMCQLEDSLQTLVQEEQI 455 >UniRef50_D1RBB2 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RBB2_9CHLA Length = 544 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 94/380 (24%), Positives = 153/380 (40%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +++ SD+H R+RI G ++ + + L + D Sbjct: 163 LNLILTEAIQQGASDIHFEPLEDGLRVRYRIDGILQNRHSPAVEFQAQLLTRIKVMAKLD 222 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 L ++G++ + R S G + LR+L L++LG Sbjct: 223 IAEHRLPQDGRIKLRMGR-REIDFRVSTVPIAAGERIVLRILDKGNVILGLDKLGMLPAV 281 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+ G++LVTG TGSGK+T+L + + + + +I+T+EDPVEY Sbjct: 282 LEEFKRLIALPEGIVLVTGPTGSGKTTSLYSAIFEMYSE-ETNIMTIEDPVEYNLKGIAQ 340 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +I L FA+GLR LR+DPD+I++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 341 IGVRHKIKLD---FATGLRHILRQDPDIIMIGEIRDLETAEIAIQASLTGHLVLSTLHTN 397 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RLVD L+ ++ V +Q+L Sbjct: 398 DAPSSITRLVDMGIE------PYLLSSTIVGVCAQRLVRRICPSCKTAYKPTDRELASLG 451 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR L+EL+ A+ I K+ + Sbjct: 452 LQRDELTDGNLFVGEGCSACYGTGYRGRHGLYELMSINNAIKKQIV--KSADAVEMRDVA 509 Query: 306 QQVGMITFQQSYQHRVGEGR 325 GMI +G Sbjct: 510 LNTGMIGLLNHGAELAKKGV 529 >UniRef50_B4U727 Type II secretion system protein E n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U727_HYDS0 Length = 560 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 101/377 (26%), Positives = 162/377 (42%), Gaps = 68/377 (18%) Query: 4 EEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 + I+ +VK SD+H+ R+RI G ++ +++E L D Sbjct: 184 DSILYRAVKDGASDIHIEPQEKEIVLRFRIDGMLKKIDTYPTNIKEPLVSRFKILANLDI 243 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRL-LPSH--CPQLEQLGAPTV- 111 ++G + +S + +LR S G + +R+ P +LE LG Sbjct: 244 SERRKPQDGTIKVRIS-NKKVQLRISTLPTIFGEKIVMRVQFPDEFSALKLETLGFEEDE 302 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + G+ILV G TGSGK+TTL +++ LN+ D +I+T EDPVE Sbjct: 303 VEKLKQTYSKPYGIILVVGPTGSGKTTTLYSILQDLNKE-DVNIVTAEDPVEINIPGLNQ 361 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++G TF S LR+ LR+DPD++L+GE+RD+ T +A+ ++ TGHLVL+TLH Sbjct: 362 VQIDEKVGR---TFESVLRSFLRQDPDIMLVGEIRDAITAEIAIKSSLTGHLVLSTLHVN 418 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RL+D ++ SL AV +Q+L Sbjct: 419 DAPSTVARLIDMGIE------PFLISSSLLAVSAQRLVRKLCPYCKIPYEPTKEKREYYG 472 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +GR + EL+ + I + KT + + + + Sbjct: 473 ITTNTIYKASKQGCEHCNYLGYKGRTVIAELMFVDNEIREAINQKKTTE--EIREIAIKK 530 Query: 309 GMITFQQSYQHRVGEGR 325 GM T QS +V +G Sbjct: 531 GMKTLFQSGIIKVNKGI 547 >UniRef50_A6Q683 Type II secretion system protein E n=3 Tax=Epsilonproteobacteria RepID=A6Q683_SULNB Length = 503 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 107/376 (28%), Positives = 178/376 (47%), Gaps = 68/376 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++K SD+H+ S R RI G ++ + L+ + D Sbjct: 127 VNSLFFQAIKKGASDIHIESGERKGEVRLRIDGALKKHLDLEKSIINLVINRIKVISSLD 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGA---- 108 + ++G+ ++S + +R S +G + +R+L H P L++LG Sbjct: 187 ISEKRVPQDGRTQISIS-GKTLDVRVSVLPTYYGERVVMRILMQSEHIPSLQELGFAEDL 245 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L +LL +G+ILVTG TGSGKSTTL A + ++ D +I+T+EDPVEY ++ Sbjct: 246 TEDLYKLLNHAHGMILVTGPTGSGKSTTLHAFLQHIAT-PDKNIITVEDPVEYNASNISQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL TFA+GLR+ LR+DPD+I++GE+RDSET +AL +A TGHL+L+TLHT Sbjct: 305 IQVNTKVGL---TFAAGLRSILRQDPDIIMVGEIRDSETADIALRSALTGHLLLSTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + ++ RL+D ++ +L VL+Q+L Sbjct: 362 DSTSSLSRLMDMGIEN------FLISATLLGVLAQRLTRKLCVHCKEKALLPSAIAEEIS 415 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREG-KTHQLPHVIQTGQQV 308 +GR A+ EL I V ++++G HQ+ V+ ++ Sbjct: 416 VAVDKLYFRAVGCKECDFTGYKGRQAIGELFIIDDRVKEMMKDGFNDHQVREVM---KKN 472 Query: 309 GMITFQQSYQHRVGEG 324 GM T + + G Sbjct: 473 GMKTIADKLKEMLLSG 488 >UniRef50_B2SPL0 Tfp pilus assembly protein n=67 Tax=Proteobacteria RepID=B2SPL0_XANOP Length = 377 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 122/329 (37%), Positives = 192/329 (58%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAP---FDTPDVEELLREWLDDDQR 57 M++ + L + N SD+ L + P +I G++ V+++ +D+ Q Sbjct: 1 MDIGYFLKLMTEKNASDMFLTTGAPVHIKIEGKLYPLGNTGLPPGMVKKIAYSLMDEGQV 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +L+ A++L + R R +AF QR + + +R + S P +E+L P VL +++ Sbjct: 61 PQFERELELNIAIALPDAGRFRVNAFKQRGEVGMVIRAIRSRIPSIEELHLPQVLKDIIM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LV G+TGSGKST+LAAM+ + N HILT+EDP+EYL+ + ++ QRE+GL Sbjct: 121 APRGLVLVVGSTGSGKSTSLAAMIDHRNSTTTGHILTIEDPIEYLHKHKMSIVNQREVGL 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 F S L+ A+RE PDVIL+GE+ D+ET+ A+ AETGHL LATLH+ A Q +ER+ Sbjct: 181 DTHAFQSALKNAMREAPDVILIGEILDAETMEAAIAFAETGHLCLATLHSNNADQTIERI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + V LA +LRAV+SQ+L R E+L+NTP + +L+R G+ H+ Sbjct: 241 LNFFPESAHNNVLMNLALNLRAVISQRLVKGLDGRRRPATEVLLNTPMIRDLLRRGQVHE 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++ + GM TF Q V G + Sbjct: 301 VKQAMEESLEEGMQTFDQCLFRMVKSGEI 329 >UniRef50_A3CR73 PilB-like pili biogenesis ATPase, putative n=2 Tax=Firmicutes RepID=A3CR73_STRSV Length = 560 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 96/375 (25%), Positives = 166/375 (44%), Gaps = 66/375 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ I++ ++K SD+H+ R+R+ G + + + + D Sbjct: 181 IDSIISQAIKTRTSDIHIEPFEKVVRVRFRVDGTLVENMQLKANAHSAIATRIKIMSGLD 240 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT-- 110 + ++G+++ + + +R S G + +R+L + E+LG Sbjct: 241 IAERRIPQDGRIETTID-GKEVDMRVSVLPTVFGEKIVIRILSRNATLLSKEELGFSPTN 299 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++LK+ G+IL+TG TGSGK+TTL + LN +I+T+EDPVEY Sbjct: 300 QKLFEDILKAPEGIILLTGPTGSGKTTTLYTALRELN-DVGKNIITVEDPVEYRLEGVNQ 358 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFASGLR+ LR+DPD++LLGE+RD ET +A+ AA TGH+VL+T+HT Sbjct: 359 VQVNNKAGL---TFASGLRSILRQDPDIVLLGEIRDEETASIAVRAAITGHVVLSTIHTN 415 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RLVD ++ + +++Q+L Sbjct: 416 DTASTVNRLVDMGIK------PYLVSTATVGIIAQRLIKRICPKCKTEYTVETNEHAGIG 469 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR+A+ E++ T + +LI +G T + ++ G Sbjct: 470 IHKGDTLYRGRGCNYCSGTGYYGRIAIHEIMAVTREIKSLINDGGTT--SQLRAEAKKNG 527 Query: 310 MITFQQSYQHRVGEG 324 M + +G Sbjct: 528 MRDLAEEAIDIAKQG 542 >UniRef50_B2V6W7 Type II secretion system protein E n=2 Tax=Hydrogenothermaceae RepID=B2V6W7_SULSY Length = 578 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 92/382 (24%), Positives = 150/382 (39%), Gaps = 72/382 (18%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQ---- 56 +I+ + K SD+H+ R+RI G + + + Sbjct: 197 NQIIEDAYKKGASDIHIQPTENNLRIRFRIDGDLNDYLVLPKYTADAIIARYKIMANMKL 256 Query: 57 -RAILLENGQLDFAV-SLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVL 112 L ++ ++++ + + N LR S +G L +R+L L +LG Sbjct: 257 DEKRLPQDSRINYNYYNPSINIDLRVSTIPSVYGEDLVMRILDKSNVILDLNKLGFSDEY 316 Query: 113 PEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS-QR 167 L + G+IL G TGSGK+TTL + + +++ D +LT+EDPVEY Sbjct: 317 LSLYRDSILKPYGIILHVGPTGSGKTTTLYSALKEIDK-PDIKVLTVEDPVEYQLGGSIV 375 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 G TFA +R+ LR DPDVIL+GE+RD ET + A+ A+ TGHLV +TLHT Sbjct: 376 QTNINPAAG---YTFAKAIRSFLRHDPDVILVGEIRDLETAKTAVEASLTGHLVFSTLHT 432 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 + + RL + LA SL + +Q+L Sbjct: 433 NDSVSTITRLEEMGVET------YLLADSLLLICAQRLVKKICPHCKEEYKATKKEKIIL 486 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR + ELL + ++I + + + + + Sbjct: 487 ENAGMEFEENLTLYKGAGCSVCNFTGYKGRTGIHELLKIDDVLKSMIIDKASTE--DMKK 544 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 GM T +Q + +G Sbjct: 545 YALGHGMKTLRQDGLLKALKGI 566 >UniRef50_C9A706 Type II/IV secretion system protein n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A706_ENTCA Length = 534 Score = 386 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 92/377 (24%), Positives = 157/377 (41%), Gaps = 68/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQ--- 56 + ++ +V SD+H R R+ G + ++ + L Sbjct: 152 VNTLLQDAVDRGASDIHFDPQEKGLVVRLRVDGELRTHENLPKSIQTGVTSRLKIISSLD 211 Query: 57 --RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 + ++G+ + LR S HG + +R+L +L++ Sbjct: 212 ITETRVPQDGRAMIR-NGGNVVDLRVSVLPVIHGEKVVIRVLDRSSGIRRLDEFRFEPKV 270 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L +G+ILVTG TGSGKS++L A + LN + +I+T+EDPVE+ Sbjct: 271 LATFKAILHKPHGIILVTGPTGSGKSSSLYAALQELNT-PEINIITVEDPVEFQLQGINQ 329 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +GL TF++GLR+ LR+DP+V+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 330 VAVNSNVGL---TFSAGLRSILRQDPNVVMVGEIRDGETAEIAIRASMTGHLVLSTLHTN 386 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + + RLVD +A +L +L+Q+L Sbjct: 387 DSVSTINRLVDMGVE------PFLVANALEGILAQRLVRTLCSSCKTVGPASDKDKQLFE 440 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR+A+ ELL + +I T+ ++ Q+ Sbjct: 441 SYGITVTELAQPVGCPKCGNTGFKGRMAVQELLTIDAKLRRMITNKATND--QLMDYVQE 498 Query: 308 VGMITFQQSYQHRVGEG 324 M +V +G Sbjct: 499 RKMRFLLDDGLDKVQQG 515 >UniRef50_C1XWL4 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=4 Tax=Bacteria RepID=C1XWL4_9DEIN Length = 888 Score = 386 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 97/380 (25%), Positives = 156/380 (41%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + SD+H+ R R+ G + + + D Sbjct: 510 VNNIIREAYLQEASDIHIEPRQQEILVRIRVDGNLREYMKLPKGAGPAIASRVKIMANLD 569 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 L ++G++ F + + LR S +G + +RLL P++EQLG Sbjct: 570 IAERRLPQDGRVRFR-ERSIDLDLRLSTLPTVYGEKVVMRLLRKATEIPEIEQLGFAPGV 628 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++ G+ L+TG TGSGKS T +++ + + + T+EDPVEY Sbjct: 629 FQRFEDVISKPYGIFLITGPTGSGKSFTTFSILKRIAT-PEKNTTTIEDPVEYEIPGINQ 687 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 GL TFA LR+ LR+DPD+I++GE+RD+ET ++A AA TGHLV+ATLHT Sbjct: 688 TQVNPVAGL---TFAKALRSFLRQDPDIIMVGEIRDAETAKIATEAALTGHLVIATLHTN 744 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV RL + ++ +L VL+Q+L Sbjct: 745 DAAGAVTRLEEMGVE------LFNISAALVGVLAQRLVRRVCENCKTEVEPDPHILRRLG 798 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR A+ EL++ + I GK+ V Sbjct: 799 MSEADIRGKKLYKGVGCERCNGTGYKGRAAIHELMVINEEIRAAIVAGKSA--SEVKDIA 856 Query: 306 QQVGMITFQQSYQHRVGEGR 325 ++ GM T ++ + G Sbjct: 857 RKTGMSTLREDGIQKAFMGI 876 >UniRef50_UPI0001C37050 pili biogenesis protein PilT-like ATPase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37050 Length = 366 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 132/332 (39%), Positives = 195/332 (58%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA-----PFDTPDVEELLREWLDDD 55 +N+ +I+ SDLH R+ G + D ++ E+ R+ ++ Sbjct: 4 INIHKILDEVRVLGCSDLHFTDRIAPVVRLNGNLRTMRTQYPEMDAEEIMEIARQMTNEK 63 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 Q+ + DF+ + N R R + + Q+ ++A+RLL + P L+ LG P++L E Sbjct: 64 QQTSINNGKDTDFSFTTRSNYRHRVNVYFQKGKPAIAIRLLRNDIPTLDDLGLPSILAEF 123 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 GL+LVTG TGSGKSTTLA M+ ++N + AHI+T+EDP+EY++ +RC++ QREI Sbjct: 124 AMRPRGLVLVTGPTGSGKSTTLAGMIDHVNLNKSAHIITIEDPIEYVHEHKRCMVNQREI 183 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G +F+ LRAALREDPDVIL+GE+RD ETI+ A+TAAETGHLV++TLHT AA + Sbjct: 184 GADVDSFSLALRAALREDPDVILVGEMRDFETIQAAVTAAETGHLVMSTLHTTSAADTIN 243 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++D +P ++ +R QLA +L V+SQ L K GR+A E+L T AV IR+ K Sbjct: 244 RIIDVYPEHQQQQIRTQLANNLVGVISQTLIPKKDGSGRIAAMEILRVTDAVSAQIRDNK 303 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 H + IQTG+ GM+ V + Sbjct: 304 IHLIQSTIQTGKAEGMMCLDFELARMVRNNVI 335 >UniRef50_B9XRT3 Type II secretion system protein E n=2 Tax=Verrucomicrobia RepID=B9XRT3_9BACT Length = 580 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 99/379 (26%), Positives = 160/379 (42%), Gaps = 70/379 (18%) Query: 4 EEIVALSVKHNVSDLHLCSAWPA---RWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I+ ++K SD+H+ R+R+ G + ++ L L D Sbjct: 202 NLILVQAIKDRASDIHIEPFEKVIRLRYRVDGALLDVTPPPKQMQLALASRLKIMSSLDI 261 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTV-- 111 L ++G++ VS ++ LR S HG LR+L L++LG Sbjct: 262 AERRLPQDGRMRVKVS-GKDYDLRVSFLPTVHGEKCVLRVLDKSNLSASLDKLGLDPDTF 320 Query: 112 --LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 + S +GLILVTG TGSGK+TTL + + LN +I+T+EDPVE+ + Sbjct: 321 QQFKAAVDSPHGLILVTGPTGSGKTTTLYSALNELNS-PVYNIVTVEDPVEFQLPGINQV 379 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 ++EIGL TFA+ LR+ LR+DPD++++GE+RD+ET +A+ AA TGH VL+T+H Sbjct: 380 PVKKEIGL---TFANALRSILRQDPDIVMIGEIRDTETAEIAVEAALTGHQVLSTMHCND 436 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 A A+ RL D ++ S+ +Q+L Sbjct: 437 APGAIVRLDDMGI------APFLISSSVVLTCAQRLMRRICSHCKEPVTYNEKMYQDLNI 490 Query: 269 ----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 GR+A+ E + + + L+ + + Sbjct: 491 DPGIFDGVTLQRGRGCERCKGSGYSGRLAIIEAMTISDEIRKLVIARANT--REMGKIAI 548 Query: 307 QVGMITFQQSYQHRVGEGR 325 GM T + + R +G Sbjct: 549 AQGMRTLRMAALDRARDGV 567 >UniRef50_A5GMV2 Twitching motility protein n=3 Tax=Synechococcus RepID=A5GMV2_SYNPW Length = 430 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 136/327 (41%), Positives = 190/327 (58%), Gaps = 4/327 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAI 59 +E+IV ++ SD+HL R+R RG M E D + LRE L + Sbjct: 81 LEDIVQIAHAKGHSDVHLGVGEIPRFRARGEMLQTEWPVTDPGTFQGWLREILSPQHIDL 140 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + + D + + R+R + G ++ LRL+P LE L P VL EL Sbjct: 141 FQQTKEFDGSHAFPF-VRVRINLLDSLLGPAMVLRLIPQTILTLEDLNLPDVLRELASRP 199 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLAAM+ ++N+H HILT+EDPVE+++ SQR LI+ RE+GLH Sbjct: 200 KGLVLVTGPTGSGKSTTLAAMIDWINRHQTRHILTIEDPVEFVHQSQRSLIRHREVGLHT 259 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 + F + LRAALREDPDVIL+GE+RD ET+ AL A++TGHLV TLHT A + VER++ Sbjct: 260 LQFHNALRAALREDPDVILVGEIRDRETLSTALEASQTGHLVFGTLHTNSAVKTVERVLG 319 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLP 299 FP +++D VR L+ SL V++Q L R A ++LINT A + I+ G + Sbjct: 320 LFPPEDQDSVRRSLSESLLGVIAQGLIRTNDGKRAAYHDILINTEACKDYIQRGALDDVE 379 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++ GM+T QS V R+ Sbjct: 380 EIMERSGFDGMVTSNQSLLALVEAERI 406 >UniRef50_C0GMA1 Type II secretion system protein E n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMA1_9DELT Length = 594 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 106/392 (27%), Positives = 164/392 (41%), Gaps = 81/392 (20%) Query: 3 MEEIVALSVKHNVSDLHLCS--AWP---ARWRIRGRMEAAPFDTPDVEELLREWLD---- 53 + ++ + + SD+H+ R R+ G + + L L Sbjct: 203 VNALLLEAWRRKASDIHIEPSPGSRYCLIRMRVDGTCHEFKKIRLALAKPLVSRLKIMSS 262 Query: 54 -DDQRAILLENGQLDFAV-SLAENQRLRGSAFAQRHG-ISLALRLLPSHCP-QLEQLGAP 109 D L ++G+L + +++ R + G + LR+L S P L++LG Sbjct: 263 LDIAERRLPQDGKLKIKLPEVSQVLEFRVATVPTTGGQEDVVLRVLTSGKPITLKELGLS 322 Query: 110 ----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 +L+K GLILV G TGSGK+TTL + + +N D + T EDPVE Sbjct: 323 SNNLEHFDKLIKKPYGLILVVGPTGSGKTTTLHSALSCINT-PDKKVWTAEDPVEISQEG 381 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 R + +IGL TFA LR+ LR DPDVI++GE+RD ET +A+ A+ TGH+V +TL Sbjct: 382 LRQVQVNPKIGL---TFAHLLRSFLRADPDVIMVGEMRDRETAHIAVEASLTGHIVFSTL 438 Query: 226 HTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------- 268 HT A + + RL+D D A SL VL Q+L Sbjct: 439 HTNTAPETITRLLDM------DLDPFNFADSLLCVLGQRLIKTLCPRCKEKYNPDSAELQ 492 Query: 269 -----------------------------------KQEGRVALFELLINTPAVGNLIREG 293 GR+ + EL++NT + +LI+ Sbjct: 493 ELEMEYGEGFNAWKEHYFHKKAVLYRGKGCRDCIGGYRGRLGIHELMLNTDKIKDLIKFR 552 Query: 294 KTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 K+ + + Q GM++ +Q H+V G Sbjct: 553 KSAE--EIRQQATMEGMLSLKQDGIHKVLAGL 582 >UniRef50_A0Q077 General secretion pathway protein E n=3 Tax=Clostridium RepID=A0Q077_CLONN Length = 515 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 66/375 (17%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I+ ++ SD+HL R+RI G + +V L+ + D Sbjct: 140 NSIINQAINKKASDIHLEPFKNKVIVRFRIDGVLNERMTIPKEVYVLVNTRIKIKSGMDI 199 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTV---- 111 + ++ ++G++++ + LR S+ +G + +R+L ++ Sbjct: 200 SKKMIPQDGKMEYEFR-DKTFNLRVSSIPTINGEKIVIRILYKTNKNIDINNLIEDQDDL 258 Query: 112 --LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 + ++L +G+ILVTG TGSGK+TTL +M+ LN + +I+T+EDPVEY + Sbjct: 259 ILIKKILSHPSGIILVTGPTGSGKTTTLCSMLNELNSK-ERNIVTIEDPVEYEIERINQM 317 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 + GL TF+S LR+ LR+DPD I++GE+RD+ET +++ AA TGHLVL+TLHT+ Sbjct: 318 NVNNKAGL---TFSSALRSILRQDPDTIMIGEIRDAETADISVKAAITGHLVLSTLHTKD 374 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 AA RL D +A SL AV++Q+L Sbjct: 375 AATTPMRLCDMNVEN------YLIADSLVAVIAQRLVRKICPYCKEEYILNDREMEFLNI 428 Query: 269 ------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 +GR A+FE++ LIR+G++ + + GM Sbjct: 429 HNKEKVYKGRGCKFCNGSGYKGRRAVFEIMYLDETHRELIRKGQSS--NKIRNYSIKSGM 486 Query: 311 ITFQQSYQHRVGEGR 325 + ++S + V G Sbjct: 487 KSIKESCEKLVLSGV 501 >UniRef50_B4D003 Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D003_9BACT Length = 359 Score = 385 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 130/330 (39%), Positives = 192/330 (58%), Gaps = 6/330 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +++ + V SDLHL P + R G + ++ ++ E D+ A Sbjct: 4 IDQFFEVLVNAGASDLHLAEGQPPKIRRHGEVMPIRNEELTNEEMAYMMSEIAGPDRWAR 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 LE G LDFA + E+ R R + Q G RL+P+ L+QLG P V+ E Sbjct: 64 YLEVGDLDFAYEMDEHSRFRCNYLKQTRGFGCVFRLIPTKILTLDQLGIPPVVKEFGHLR 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLAA++ Y+N + HI+T+E+P+E+++ +++ +I QRE+ + Sbjct: 124 GGLVLVTGPTGSGKSTTLAALIDYINVNFTRHIITVEEPIEFVHKNKKSIITQREVPENT 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +F GL+AALRED D++L+GE+RD ETI+LALTAAETG LV TLHT A + V+R++D Sbjct: 184 PSFPQGLKAALREDADIVLVGEMRDLETIQLALTAAETGLLVFGTLHTNNARKTVDRMID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDK---QEGRVALFELLINTPAVGNLIREGKTH 296 FP+ ++ VR LA SLR V++Q L GR+A+ E+L+ A +IREG T Sbjct: 244 VFPSDQQAQVRTMLAASLRGVVAQLLLKKTAEVGGGRLAVNEILVVNSAASAIIREGATQ 303 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +L VI G GM + + +G + Sbjct: 304 KLQDVIVAGGGSGMQFMDDAIWKVMQQGIV 333 >UniRef50_C8W1Q1 Type II secretion system protein E n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W1Q1_DESAS Length = 527 Score = 385 bits (991), Expect = e-106, Method: Composition-based stats. Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 +E I+ + SD+H+ R R+ G + ++ L + D Sbjct: 147 LEYILYFAATDKASDIHIEPQEKHVRVRQRLDGMLREMQIFPLAIKLSLISRIKILSQLD 206 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 L ++G++ V+ ++ LR S G LR L L LG Sbjct: 207 IAEKRLPQDGRIPIMVN-GQHIDLRISTIPTITGEKCVLRFLYKDHKVIDLNGLGFTEYN 265 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +++ +G++L+TG TGSGK+TT+ A + + + + +T+EDPVEY Sbjct: 266 LDRFHRIIRKPHGMVLLTGPTGSGKTTTMYAALTEI-STVEKNAITIEDPVEYSLTGVNQ 324 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL TFA+GLR+ LR+DPD+I++GE+RD ET +A+ AA TGHLVL+T+HT+ Sbjct: 325 IQVNPVAGL---TFAAGLRSILRQDPDIIMVGEIRDQETAEIAVRAATTGHLVLSTMHTK 381 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 ++ AV RL+D +A S+ VL+Q+L Sbjct: 382 DSSGAVIRLIDMGIE------PYLVASSVSGVLAQRLVRVLCPQCRVKYELHLSEQEKHM 435 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + E+L + ++ LI + + V + G Sbjct: 436 WGIEDKDAVVLFRESGCESCNFTGYRGRTCISEVLPLSRSIKKLI--NRQYSEDDVREQG 493 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM+T + ++ +G Sbjct: 494 LREGMLTLMKDGINKALQGL 513 >UniRef50_C7R600 Type II secretion system protein E n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R600_KANKD Length = 659 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 100/375 (26%), Positives = 161/375 (42%), Gaps = 66/375 (17%) Query: 5 EIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQ 56 I+ +++ SD+HL +R+ G + + + L + D Sbjct: 277 SIITDAIEKGASDIHLHPRAKYLQLLYRMDGSLTPIRKLNLSLHQALVSRIKIIGGMDIS 336 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV--- 111 L ++G++++A ++ +R S +G S+ +R+L S + +LG Sbjct: 337 ERRLPQDGRIEYA-GNGKSIDMRISVMPTVYGESVVIRILDSSQGLRDINELGLTEKDTE 395 Query: 112 -LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 LL S G+ LVTG TGSGKSTTL A + + HI+T+E+PVEY + Sbjct: 396 RFVNLLHSSYGMFLVTGPTGSGKSTTLYAAINEKVKEGP-HIITVEEPVEYKMEGVTQIP 454 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 + G +FA LR LR DPDVI++GE+RD ET ++A+ ++ TGHLVL+TLHT A Sbjct: 455 VNHKTG---YSFARALRNILRHDPDVIMVGEIRDGETAKIAVESSLTGHLVLSTLHTNSA 511 Query: 231 AQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE------------------- 271 + RLV+ L +L +L+Q+L + Sbjct: 512 VSTITRLVEMGVE------PYLLKDALVGILAQRLVKKNCKHCLVEEKIPGSILKEIQAA 565 Query: 272 --------------------GRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMI 311 GR +++ELL TP V I +T + + Q Q GM+ Sbjct: 566 KNDKFYKGAGCAECFNTGIAGRRSVYELLSITPEVAREI--NETLDINKLNQIAQNQGMV 623 Query: 312 TFQQSYQHRVGEGRL 326 + Q + + Sbjct: 624 SLAQMALELARKKEI 638 >UniRef50_A1TUR3 General secretory pathway protein E n=5 Tax=Proteobacteria RepID=A1TUR3_ACIAC Length = 578 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 103/380 (27%), Positives = 160/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + SD+HL R+R+ G ++ P + + + D Sbjct: 196 VNAIIGRVIDLRASDIHLEPFDDGLHVRYRVDGVIQLGELVPPRLSAAVSSRVKLLAHLD 255 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 L ++G++ V LR S HG S+ +R+L QLE +G Sbjct: 256 IAERRLPQDGRIKTRVK-GRELDLRVSTVPTVHGESVVMRVLDRASVRLQLETMGFEKDT 314 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LL +G++LVTG TGSGK+TTL A + ++ ++ I+T+EDPVEY Sbjct: 315 LERFNMLLAKPHGILLVTGPTGSGKTTTLYAALSKIDAESN-KIITVEDPVEYQLEGINQ 373 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA+ LR+ LR+DPD+I++GE+RD ET ++A+ +A TGHLVL+TLHT Sbjct: 374 IQVHPQINL---TFANALRSILRQDPDIIMIGEMRDGETAQIAVQSALTGHLVLSTLHTN 430 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV R+ D + S+ VL+Q+L Sbjct: 431 TAAGAVIRMKDMGVEG------YLITSSVNGVLAQRLVRTLCSHCKEPYEPGDEVRRTTG 484 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + EL + + I +GK + Sbjct: 485 LHRFSTFGQAIYRAVGCEHCRGSGYRGRTGIHELFVLDEPMRRAIIDGKDA--NALNTLA 542 Query: 306 QQVGMITFQQSYQHRVGEGR 325 Q GM+ + +V G Sbjct: 543 AQGGMLNLYEDGLRKVAAGM 562 >UniRef50_B6ELG1 Type IV pilus assembly protein PilB n=13 Tax=Gammaproteobacteria RepID=B6ELG1_ALISL Length = 563 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 104/376 (27%), Positives = 166/376 (44%), Gaps = 66/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +I+ +V+ VSD+H + R+R G + + + L L D Sbjct: 187 INQILLEAVRKGVSDIHFEPYEETYRVRFRCDGILVENSSPSSHLSRHLSARLKIMAKLD 246 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTVL 112 L ++G++ ++ + +R S+ G + LRLL S L+ +LG Sbjct: 247 IAERRLPQDGRIKLKLNSEVSIDMRVSSLPTLWGEKIVLRLLDSSAASLDIDKLGYSDAQ 306 Query: 113 PEL----LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 EL LK G+IL+TG TGSGK+ +L + + LN + +I T EDPVE Sbjct: 307 KELYLTALKRPQGMILMTGPTGSGKTVSLYSGLNILNTT-EKNISTAEDPVEINLNGINQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IG TFA LR+ LR+DPD++++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 366 VQVNPKIGF---TFAYALRSFLRQDPDIVMVGEIRDLETAEIAVKAAQTGHLVLSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA+ V RL + LA SL +++Q+L Sbjct: 423 SAAETVVRLGNMGIEN------FNLASSLTLIIAQRLARRLCPHCKAIDPLTPEIREEYG 476 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GR+ ++E++ T + I +G T + + Q + Sbjct: 477 IDLLGTVFQAHTEGCNECTHGYSGRIGIYEVMPFTRELSIAILKGAT--VRQIEQLAIKQ 534 Query: 309 GMITFQQSYQHRVGEG 324 GM S R+ +G Sbjct: 535 GMDNLATSGIKRLEDG 550 >UniRef50_C4XH26 General secretion pathway protein E n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XH26_DESMR Length = 600 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 112/378 (29%), Positives = 166/378 (43%), Gaps = 70/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++A +V+ SD+H+ R+R+ G + + + D Sbjct: 222 VNQLLAQAVRDLCSDIHIEPYQNSLKIRFRLDGVLYDIKTLDKRWHPPVVSHVKIRSKLD 281 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT-- 110 L ++G D + N +R S F + G L LRLL S L +LG Sbjct: 282 IAERRLPQDGSFDIRLG-NRNVDIRVSVFPTKFGERLVLRLLEKNSRILSLGELGLSPGH 340 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L L + +G+ILVTG TGSGKSTTL A++ ++N D +ILT+EDPVEY Sbjct: 341 FEELSALARLPHGIILVTGPTGSGKSTTLYALINHINST-DKNILTIEDPVEYQIEGVGQ 399 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA GLR+ LR+DPDVIL+GE+RD+ET ++A AA TGHLV +TLHT Sbjct: 400 MQVNAKIDL---TFAGGLRSILRQDPDVILVGEIRDTETAQIACQAALTGHLVFSTLHTN 456 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA AV R+VD + +RA+++Q+L Sbjct: 457 DAASAVTRMVDMGIE------PYMVCSVVRALIAQRLVRVLCPHCKEAFVPTEEDLLPFG 510 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR ++ ELL+ A+ LI + + Sbjct: 511 PGAAALAGRSFCRAVGCPQCMGTGYRGRTSIHELLVIDEAMAELILHN--PEAGRIRAAA 568 Query: 306 QQVGMITFQQSYQHRVGE 323 GM T +Q ++ Sbjct: 569 MAAGMATLRQDGMDKILR 586 >UniRef50_B9XBG1 Twitching motility protein n=1 Tax=bacterium Ellin514 RepID=B9XBG1_9BACT Length = 362 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 124/330 (37%), Positives = 201/330 (60%), Gaps = 4/330 (1%) Query: 1 MNM-EEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQ 56 M + +I+ L+ SD+H+ P +RI + A P + +++ + Sbjct: 1 MELFHKILKLAHDGAASDIHIKVGTPVVFRINRSLVAIECPIPTEEWMNNVVKNIVPVHL 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 L E + DF+ + R R + F QR +LA+RL+ ++ P E LG P V+ ++ Sbjct: 61 HKKLEEERETDFSYLEPGSGRFRTNVFQQRGSFALAMRLVKANVPSFETLGLPDVIKKIA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 +S G++L+ G+TGSGKSTTLAAM+ ++N + HI+TLEDP+EY++ +C+I+QRE+G Sbjct: 121 ESPRGIVLLAGSTGSGKSTTLAAMIEHVNAVSKKHIVTLEDPIEYVFEDNQCVIEQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 L +F L++ALR+DPD+I++GE+RDS + A++AA+TGHLVL+TLHT A Q+V R Sbjct: 181 LDTRSFQGALKSALRQDPDIIMVGEMRDSVSFSAAMSAADTGHLVLSTLHTTTAGQSVGR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 ++D F A E++ +R Q+AG+L+AV+ Q++ E++INT V +I + + Sbjct: 241 ILDFFQADEREQIRRQIAGTLQAVICQRMVPTLTGTMTPACEIMINTSTVKKMIEDNRIE 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +L I+TGQ GM F Q+ V EG++ Sbjct: 301 KLHAAIETGQDDGMQNFNQALFALVKEGKI 330 >UniRef50_Q894E4 General secretion pathway protein E n=1 Tax=Clostridium tetani RepID=Q894E4_CLOTE Length = 482 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 87/367 (23%), Positives = 169/367 (46%), Gaps = 57/367 (15%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++ SD+H+ R+RI G + + ++ ++ + D Sbjct: 118 LNYFLKEAIFKKASDIHIEPFEGKAIVRFRIDGVLHEFWKLSQELYRQIKGRIKILSNMD 177 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 ++G+ F ++ +R S + + +RLL +L+ LG Sbjct: 178 IAEKRYPQDGKFKFNF-YKKDLDIRVSTMPTLYDEKIVMRLLYKSEVLIKLKDLGFYGES 236 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++ K +G+ILVTG TGSGK+TTL +++ +++ +I+T+E+PVEY Sbjct: 237 FHEIKKISKYSSGMILVTGPTGSGKTTTLYSIINEMDKKH-RNIITIEEPVEYSMDGVNQ 295 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IG MTF++ L+ LR+DPDVI++GE+RD ET ++A+ A+ TGHLVLA+LHT+ Sbjct: 296 INIREKIG---MTFSNVLKYTLRQDPDVIMIGEIRDKETAKIAIRASLTGHLVLASLHTK 352 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 ++ RL+D L +L A++SQ+L Sbjct: 353 DPLSSIIRLIDMGVPD------YLLMEALNAIISQRLVRKLCPFCKEKFFYEAMNSEIYK 406 Query: 268 ---------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQ 318 GRV ++E +I + ++ +G + + + + +++ Sbjct: 407 KVGCEKCNDTGYLGRVLIYEKVILDEDIKEMVLKG--CNMNEIRKYTLEKNKTNLEENAL 464 Query: 319 HRVGEGR 325 + + +G+ Sbjct: 465 NLIKKGK 471 >UniRef50_Q180E0 Putative type IV pilus-assembly protein n=8 Tax=Clostridium RepID=Q180E0_CLOD6 Length = 459 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 101/368 (27%), Positives = 168/368 (45%), Gaps = 60/368 (16%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 E ++ ++K N SD+H+ R R+ G ++ DV L + D Sbjct: 90 FENLLEKAIKENASDIHIEPFKEHLIVRMRVDGELKEVSKFLVDVYPSLSTVIKLKASMD 149 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G++D + +R S+ +G + LR+L + +LG Sbjct: 150 ITEKRLPQDGRVDIKLG-GNLIDIRVSSIPTVYGEKIVLRILNRDTFLKDKLELGFSEEA 208 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++ G++LVTG TGSGK+TT+ +++ L + + +I+T+E+PVEY Sbjct: 209 IKSINRIINKRAGILLVTGPTGSGKTTTVYSLLNDL-KGINKNIMTIENPVEYKMDGISQ 267 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++GL +F GLRA LR+DPD+I++GE+RD+ET ++A+ AA TGHLV++TLHT Sbjct: 268 IQVNSKVGL---SFDVGLRAILRQDPDIIMVGEIRDAETAKIAVRAAITGHLVISTLHTN 324 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A ++ RL++ L SL V+SQKL Sbjct: 325 DAVSSIARLLEMQIP------PYLLNASLIGVISQKLVRKVCNHCSHEIMIKDNFSGDVN 378 Query: 268 ------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQ 315 GR A++E+L + IR + + Q GMITF+ Sbjct: 379 TKVAVGCEKCNDKGYFGRTAIYEILEINDDIKTCIRNMEDS--STIKDVAQNNGMITFED 436 Query: 316 SYQHRVGE 323 S + + E Sbjct: 437 SCKRLINE 444 >UniRef50_D1B5J6 Type II secretion system protein E n=3 Tax=Synergistaceae RepID=D1B5J6_THEAS Length = 559 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 106/376 (28%), Positives = 171/376 (45%), Gaps = 66/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +VK SD+H+ + R+RI G + + ++ + + D Sbjct: 185 VNSIMEQAVKEGTSDIHIEVFERSARVRYRIDGALFDSLEYPRNLHPAVCSRIKIMSGMD 244 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 ++G++ V + LR S+ G + +RLL LE+LG Sbjct: 245 ISERRKPQDGRILVKVG-NKRVDLRVSSLPALFGEKIVMRLLDQENAMVGLEKLGFEPNE 303 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L +++ G+ILVTG TGSGKSTTL +++ +N D +I+T+EDPVEY Sbjct: 304 KALLEDMISLPYGIILVTGPTGSGKSTTLYSLLEVMNT-PDVNIITVEDPVEYTMPGITQ 362 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TF+ LR+ LR+DPD I+LGE+RD ET +LA+ AA TGHLVL+TLHT Sbjct: 363 VQVNEKAGL---TFSETLRSILRQDPDKIMLGEIRDQETAQLAIRAALTGHLVLSTLHTN 419 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL+D ++ ++ V++Q+L Sbjct: 420 DAPSAVARLLDMGIQ------PFMVSSAVVGVVAQRLARRLCNFCKREMEIPPSVARSLD 473 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR ALFE+++ + I EG + + + G Sbjct: 474 LPEGTRVFAPVGCDECRNTGYKGRTALFEIMMVDEEIKRAIAEGAP--VYEIRKLAISKG 531 Query: 310 MITFQQSYQHRVGEGR 325 M T +++ +V +G Sbjct: 532 MTTLRRAGIKKVLDGI 547 >UniRef50_B9LZ76 Twitching motility protein n=98 Tax=cellular organisms RepID=B9LZ76_GEOSF Length = 356 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 144/328 (43%), Positives = 205/328 (62%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRAI 59 ++ + + + SDLHL + P +R+ G ME F + D+ +L E L + Q A Sbjct: 4 IDALFKMMNEQGASDLHLSTGSPPIFRLNGEMERLNFKSLGHEDLRSILYEILSETQIAD 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + LDFA S+ R RG+ Q GI+ R++PS +QL P + +L + Sbjct: 64 FEKRKDLDFAYSVPGIARFRGNMLMQHRGIAAVFRIIPSKILTADQLNLPEGVRKLTALK 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TGSGKSTTLAAM+ +N HILTLEDP+E+++ ++ L QR+IG H Sbjct: 124 KGLVLVTGPTGSGKSTTLAAMIDLINSTRREHILTLEDPLEFIHENKMSLFNQRQIGEHS 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 +FA+ LRAALREDPDVIL+GE+RD ETI LA++AAETGHLV TLHT AA+ V+R++D Sbjct: 184 ESFAAALRAALREDPDVILVGEMRDLETISLAMSAAETGHLVFGTLHTSSAAKTVDRIID 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 FP ++ VR L+ SL+ V+SQ+L + GR A E+++ TPA+GNLIREGKT Q+ Sbjct: 244 VFPKDAQEQVRAMLSESLKGVISQQLLRNADGKGRSAALEIMMGTPAIGNLIREGKTFQI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 P ++QT ++ GM Q + ++ Sbjct: 304 PSIMQTAKKDGMQLMDQHILDLLKTKKV 331 >UniRef50_A0RMV4 Twitching motility protein PilT n=6 Tax=Epsilonproteobacteria RepID=A0RMV4_CAMFF Length = 398 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 117/332 (35%), Positives = 182/332 (54%), Gaps = 7/332 (2%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILL 61 + + + + SDLH+ + R R++G + + + R Sbjct: 17 ELNTYLLELINSSGSDLHVKAEGIIRKRVKGEIVPISNRRVLSSKEAITLAKELLRGRFN 76 Query: 62 E---NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 E +DF ++ R R + F Q G+S R +P+ P ++LG P + + K Sbjct: 77 ELVEKKSVDFTYKFNDDYRFRVNTFFQMDGVSFVFRTIPTKLPTFDELGLPNAVEHMCKE 136 Query: 119 EN-GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 G+ILVTG TGSGK+TTLA+M+ Y+N++ +HI+T+EDP+E++Y + C+I QR IG Sbjct: 137 IYRGIILVTGPTGSGKTTTLASMINYINKNRKSHIITIEDPIEFVYKDENCIINQRSIGQ 196 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 FA LR ALREDPD+IL+GE+RD ETI +A+ AAETGHLVL+TLHT A + R+ Sbjct: 197 DTTNFADALRGALREDPDIILVGEMRDLETIEIAMHAAETGHLVLSTLHTVDAKDTIGRI 256 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 + FP E++ ++ LA L+ ++SQ+L GRVA E+++ TP + NLI E + Sbjct: 257 ISMFPGNEQNRIKLSLASVLKGIISQRLCKRADGSGRVAALEIMLATPRIKNLILENRAS 316 Query: 297 QL--PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + + ++ GM TF +G + Sbjct: 317 DMIYDAIAESSANSGMQTFDTHLLKLFIDGII 348 >UniRef50_A1K8L4 Twitching motility protein n=180 Tax=cellular organisms RepID=A1K8L4_AZOSB Length = 435 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 112/328 (34%), Positives = 188/328 (57%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRAI 59 M +++A SDL + +P + G M+ L ++ QR Sbjct: 13 MHKLLAAMSNAGGSDLFISHDFPPSMKSHGSMQPMTNQKLTGELTRSLAYSLMNAAQREE 72 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + +FA+S+ R R + F Q+ + + +R + + P E+L P VL E++ ++ Sbjct: 73 FEREMECNFAISVPGLSRFRVNVFVQQTYVGMVIRTIAAEIPNFEKLSLPEVLKEVIMNK 132 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LV G TGSGKSTTLAAM+ Y N H+ HI+T+EDPVEY++ S++ LI RE+G+ Sbjct: 133 RGLVLVVGGTGSGKSTTLAAMIDYRNSHSAGHIITIEDPVEYVHKSKKSLITHREVGVDT 192 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++ L+ LR+ PDVIL+GE+RD+ET+ A+ AETGHL L TLH A Q ++R+++ Sbjct: 193 HSWHHALKNTLRQAPDVILIGEIRDAETMEHAIAFAETGHLCLGTLHANNANQTIDRIIN 252 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 FP + ++ + L+ +LR+++SQ+L + GR A E+L+NT + I +G+ + + Sbjct: 253 FFPEERRNQLLMDLSSNLRSIISQRLVKTEDGKGRRAAIEILLNTSTIAERIFKGQYNDI 312 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++ +++GM TF + EG + Sbjct: 313 KAIMEKSRELGMRTFDWALFELYNEGHI 340 >UniRef50_C0D956 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D956_9CLOT Length = 349 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 148/330 (44%), Positives = 198/330 (60%), Gaps = 6/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M +EE++ + SDLHL P R+R GR+E D E RE + Sbjct: 1 MTIEELIRTAGDAGGSDLHLVKGLPPRFRRDGRLEDMDGEMLTDTDCEGYARELAGEAYE 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 I E G+LD A + A R+R + F Q+ IS A+RLL P+L+ LG P + Sbjct: 61 RIR-EIGELDLAGTFAG-IRVRINLFRQQGHISAAIRLLSGRIPELDSLGLPPAVSRFPS 118 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILVTG TGSGKSTTLAA++ +N+ HI+TLEDPVEY+Y +C++ QR+IG Sbjct: 119 MKRGLILVTGETGSGKSTTLAAILNEINRTRKGHIITLEDPVEYIYTPDQCVVNQRQIGT 178 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++ GLRAALREDPDVIL+GE+RD +TI ALTAAETGHLV TLHT AA +++R+ Sbjct: 179 DTRSYGDGLRAALREDPDVILIGEMRDLDTIETALTAAETGHLVFGTLHTNSAADSIDRI 238 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLE-VDKQEGRVALFELLINTPAVGNLIREGKTH 296 V+ FP + +R QL+ SL AVLSQ+L +GRVA EL++ TPA+ NLIRE KT Sbjct: 239 VNVFPDGLQRQIRLQLSTSLLAVLSQQLVERKNGKGRVAACELMMVTPAIRNLIREAKTP 298 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ + + Q G IT + + Sbjct: 299 QIASSMASAAQEGSITMDNFLVRLYKDQVI 328 >UniRef50_UPI0001746BDE type II secretion system protein E n=3 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746BDE Length = 584 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 100/380 (26%), Positives = 172/380 (45%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDT--PDVEELLREWLD---- 53 + +++ ++ +D+H+ R+RI G + P ++ + + Sbjct: 201 VNQVIREALLQRATDIHVEPVQDNLRIRYRIDGVLHEVPVPENIKSLQASVLARIKVMAR 260 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVL 112 D L ++G+++ + ++ +R + G S++LRLL L +LG Sbjct: 261 LDIAEKRLPQDGRINLKLD-NQSIDVRVACIPSVEGESISLRLLGQERFTLAKLGLNAEY 319 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LL NG++LVTG TGSGKSTTL + LN I+T+EDPVE+ Sbjct: 320 RSKVDTLLARPNGIVLVTGPTGSGKSTTLYTFLSQLNS-ISRRIVTIEDPVEHKLPGVVQ 378 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + EI +TFASGLR+ LR DP+V+++GE+RD ET +A+ A+ TGHLV +TLHT Sbjct: 379 IAVKPEI---SLTFASGLRSILRGDPNVVMVGEIRDLETAEIAVRASLTGHLVFSTLHTN 435 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RLV+ ++ S+RA ++Q+L Sbjct: 436 DAVGGITRLVEMGVE------PFLVSSSVRAFIAQRLVRSLCPQCRKPASYSPEQLSAAG 489 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR A++EL++ TPA+ +LI + +++ Sbjct: 490 FAIPVGHIIYSAAQSGCPACRSTGYYGRTAIYELVMVTPAIQDLIAQKANA--NTLLRQA 547 Query: 306 QQVGMITFQQSYQHRVGEGR 325 ++ G I+ ++ +V +G Sbjct: 548 RRDGFISMREYGWQKVLDGV 567 >UniRef50_B1ZZG2 Type II secretion system protein E n=8 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZZG2_OPITP Length = 560 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 103/377 (27%), Positives = 165/377 (43%), Gaps = 67/377 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ +++ +V+ + SD+H + R+R+ G + + + L + Sbjct: 187 VDVVLSQAVRAHASDVHFEPFEHEFKIRYRVDGALYEMAPPPKALALPVTSRLKVLADLN 246 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTVL 112 + ++G++ V LR S + G S+ LR+L LE +LG P + Sbjct: 247 IAERRVPQDGRIRLVVD-DHPVDLRVSTLPTQFGESVVLRVLDRSAVHLELGELGMPEDV 305 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++ NG+++VTG TGSGK+TTL + + +N + +LT EDPVEY Sbjct: 306 LRGITGTIRRPNGILVVTGPTGSGKTTTLYSALRAINST-ELKLLTAEDPVEYEIEGIMQ 364 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL +FA+ LR+ LR+DPDVIL+GE+RD ET ++A+ A+ TGHLVL+TLHT Sbjct: 365 VPVNPGIGL---SFAAALRSFLRQDPDVILVGEIRDLETAQMAIQASLTGHLVLSTLHTN 421 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG----RVA--------- 275 A A+ RL+D LA +L VL+Q+L RV Sbjct: 422 DAVGAIARLLDLGVE------PFLLASTLEGVLAQRLVRRVCVRCRTQRVPSRELGAQLG 475 Query: 276 ---------------------------LFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +FE L T + +I G Q + + Sbjct: 476 GFENEPLCAAGPGCAECGGTGYRGRRGIFEWLRITEGLREMIVAGAPSQ--DLRRQAVAG 533 Query: 309 GMITFQQSYQHRVGEGR 325 GM T ++ + G Sbjct: 534 GMRTLREDGLRALQAGV 550 >UniRef50_A7I2W5 Twitching mobility protein n=7 Tax=Epsilonproteobacteria RepID=A7I2W5_CAMHC Length = 402 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 127/333 (38%), Positives = 182/333 (54%), Gaps = 14/333 (4%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVE-------ELLREWLDDD 55 + + + VKH SDLH+ S R RI G + ELL + Sbjct: 23 LNQYLDYLVKHGGSDLHIKSNSVIRGRINGELVKFSTQIFTAADGIQLAKELLLTRFKE- 81 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 L+EN +DF SL + R R + F Q GIS R +P P +E+L P L ++ Sbjct: 82 ----LVENKSIDFTYSLNSDYRFRVNIFFQIDGISAVFRTIPVKIPTIEELKLPKTLGKI 137 Query: 116 LKSE-NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 G+IL+TG TGSGK+TT+A+M+ +N +HI+T+EDPVE+++ +C+I QR Sbjct: 138 CDETTRGIILLTGPTGSGKTTTIASMINRINHQRTSHIVTIEDPVEFVFKDDKCIINQRA 197 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 +G C TFA LRAALREDPD+I +GE+RD TI AL AAETGHLV +TLHT A + + Sbjct: 198 LGEDCNTFADSLRAALREDPDIIFVGEMRDLVTIETALNAAETGHLVFSTLHTVDAKETI 257 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 R++ F E++ ++ LA L AV+SQ+L RVA+ E+L + ++I EG+ Sbjct: 258 GRIIGMFEPSEQERIKMTLAAVLEAVISQRLAKTVDGKRVAVVEILRKNTRIKDMILEGR 317 Query: 295 THQLPHVIQTGQQ-VGMITFQQSYQHRVGEGRL 326 ++ I G+ GM TF Q G + Sbjct: 318 DGEITDAIADGKNTYGMQTFDQHLLELYKAGTI 350 >UniRef50_B1ZZ35 Type II secretion system protein E n=4 Tax=Bacteria RepID=B1ZZ35_OPITP Length = 568 Score = 383 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 105/381 (27%), Positives = 151/381 (39%), Gaps = 71/381 (18%) Query: 4 EEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I+ + SD+H+ R+R+ G V L L D Sbjct: 186 NRIIEDAYFAGASDIHVEPQEKEMMVRYRVDGMCSEKLRLPARVGPALVARLKIMCNLDI 245 Query: 56 QRAILLENGQLDFA--VSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV 111 L ++G++ F + LR S HG + +R+L L LG Sbjct: 246 AERRLPQDGRIIFKQYTKKGLDLDLRVSTAPLNHGEGVVMRILDKQKTTLPLPMLGFTEE 305 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 E ++ G+IL G TGSGKS TL + + +N D I T EDP+EY Sbjct: 306 NLGKYRECIRQPYGMILHCGPTGSGKSMTLYSALNEINT-PDIVIRTAEDPIEYTLPGLN 364 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + R+IGL TFAS LRA LR+DPDVIL+GE+RD ET +A+ AA TGHL+++TLHT Sbjct: 365 QMQMHRQIGL---TFASALRAFLRQDPDVILVGEIRDKETADIAVEAALTGHLLISTLHT 421 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A V RL D ++ SL V +Q+L Sbjct: 422 NDAPSTVARLTDMGIE------PFMISSSLLCVCAQRLMRRVCKTCRVPYVPQGREDEIL 475 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GRV + EL++ + I K + + + Sbjct: 476 QKAIGWSGQIFKPNPKGCPKCNSTGYKGRVGIHELMVTNEELIEGI--NKQLETAEIKKI 533 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 + GM T Q +V +G Sbjct: 534 AVRGGMKTLHQDSLIKVRDGV 554 >UniRef50_B0RYX5 Type II secretory pathway ATPase n=78 Tax=cellular organisms RepID=B0RYX5_XANCB Length = 634 Score = 383 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 102/381 (26%), Positives = 163/381 (42%), Gaps = 70/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ + + SD+HL R+RI G + P V + + D Sbjct: 252 VDWLLQYAYEQRASDIHLEPRREAGRMRFRIDGVLHKVLEVPPTVMTAVVSRIKVLGRMD 311 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 ++G++ +R S G +R+ +EQLG Sbjct: 312 LAERRRPQDGRIKTRSPGGREVEMRLSTMPTAFGEKCVMRIFDPDSAFKSIEQLGFSAEE 371 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L++ +G++LVTG TGSGK+TTL + + L D ++ ++EDP+E + Sbjct: 372 AAGWSALVERPHGIVLVTGPTGSGKTTTLYSTLKRLAT-PDVNVCSVEDPIEMIAPEFNQ 430 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q+ I L FASG+R LR+DPD+I++GE+RD ET ++A+ A+ TGHLVL+TLHT Sbjct: 431 MQVQQNIDLD---FASGVRTLLRQDPDIIMIGEIRDLETAQMAVQASLTGHLVLSTLHTN 487 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLE---------------------- 266 AA A+ RL+D +A +L VL+Q+L Sbjct: 488 DAASAITRLLDLGVPH------YLVASTLNGVLAQRLVRTLCVHCKRPHTLSEADWAAIQ 541 Query: 267 ----------------------VDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GRV L+ELL TP + +LIR L Q Sbjct: 542 EPGEALPEVLTVHAPVGCLECRRTGYLGRVGLYELLPVTPRLRSLIRAD--TDLASFSQA 599 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 + G+ T +++ +V G Sbjct: 600 ARGDGLRTLRRTGLEKVAAGL 620 >UniRef50_B1ZUM1 Type II secretion system protein E n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUM1_OPITP Length = 586 Score = 383 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 101/387 (26%), Positives = 169/387 (43%), Gaps = 77/387 (19%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVE--ELLREWLDD--- 54 + +++A +V+ +D+H R+R+ G + P + + + L Sbjct: 198 VSDVIAQAVEDQATDIHFEPQEGQLRIRYRVDGLLVPVPVPENLLRFQDAIISRLKIMAR 257 Query: 55 --DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPT 110 L ++G+++F + +R S + S++LRLL +++LG Sbjct: 258 LNISERRLPQDGRINFR-AENTVLDIRVSTIPTIYAESVSLRLLNQKKEAYSMDRLGMSA 316 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 + ++L +G+ILVTG TGSGKST+L A + +N D I+T+EDP+EY Sbjct: 317 EEQAQISQVLDYPHGIILVTGPTGSGKSTSLNAFLRKINST-DLRIITIEDPIEYEVPGV 375 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + EIGL TFA LR LR+DPDVI++GE+RD +T +A+ A+ TGHLV +TLH Sbjct: 376 NQMQVRPEIGL---TFADALRHVLRQDPDVIMVGEIRDKDTAEIAIRASLTGHLVFSTLH 432 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T A A+ RLVD +A ++ V++Q+L Sbjct: 433 TNDAPGAITRLVDMGIE------PFLVASAIELVIAQRLVRRLCPVCSRDEPANKIKLRE 486 Query: 269 ------------------------------KQEGRVALFELLINTPAVGNLIREGKTHQL 298 GR+ LFE+ + L+ + ++ + Sbjct: 487 SLSILGCPAEEADTVEALKAPVGCDRCRGTGYRGRIGLFEIFRLNDEMHELVLKRESTRT 546 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGR 325 + ++ GM T QS +V G Sbjct: 547 LD--ECARRHGMRTLGQSGWEKVKAGY 571 >UniRef50_P31703 General secretion pathway protein E n=26 Tax=Proteobacteria RepID=GSPE_PECCC Length = 498 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 107/376 (28%), Positives = 163/376 (43%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ ++K+ SD+H+ + R+R+ G + + LL + D Sbjct: 124 INAMLTEAIKNKASDIHIETYERYLLIRFRVDGVLREILRPQRKLASLLVSRIKVMAKLD 183 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPT-- 110 + ++G++ V +R S +G + LRLL + LE LG Sbjct: 184 IAEKRVPQDGRMALRVG-GRAIDVRVSTLPSNYGERVVLRLLDKNSVKLDLELLGMSERN 242 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L L+ +G+ILVTG TGSGKSTTL A + LN + +I+T+EDP+EY Sbjct: 243 RQLLDSLIHRPHGIILVTGPTGSGKSTTLYAALSRLNAS-ERNIMTVEDPIEYELEGIGQ 301 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 ++ MTFA GLRA LR+DPDV+L+GE+RD ET ++A+ A+ TGHLVL+TLHT Sbjct: 302 TQVNTKVD---MTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTN 358 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL D L+ SL VL+Q+L Sbjct: 359 SALGALSRLQDMGVE------PFLLSTSLLGVLAQRLVRTLCSDCSQPQPVDPVQAEQMG 412 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR+ + EL++ V I I G + Sbjct: 413 IAPGTLLHNPVGCPQCSFTGYRGRIGIHELVLINDDVRAAIHRSDGEMAIAQILGGSR-- 470 Query: 310 MITFQQSYQHRVGEGR 325 T +Q ++V G Sbjct: 471 -TTIRQDGLNKVLAGL 485 >UniRef50_B0VJ41 Type IV pilus biogenesis protein PilB n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJ41_9BACT Length = 569 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 93/380 (24%), Positives = 162/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++K +D+H+ R+R+ G + + L + + Sbjct: 190 INLIINEAIKAGATDIHIEPLTKISRIRYRVDGALREVMTPPIGMHPSLISLVKVMSKLN 249 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV- 111 L ++G + ++ ++ +R S G + +RLL +L LG Sbjct: 250 IAERRLPQDGHISLKTAM-KSVDVRVSITPTVLGEKVVMRLLDKGEFGFKLTTLGFEEDD 308 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++++ G+I+V+G TGSGKSTTL A + + ++ +++I+T+EDPVEY Sbjct: 309 MDIFKKIIRRPYGIIIVSGPTGSGKSTTLHAALKEI-ENIESNIITVEDPVEYRLEGVTQ 367 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TF S LR+ LR+DPD++L+GE+RD ET +A+ + TGHLV TLH Sbjct: 368 IETKEQIGL---TFGSALRSVLRQDPDIVLIGEIRDEETADIAIKFSLTGHLVFTTLHAN 424 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + R++D + SL V++Q+L Sbjct: 425 DAPATITRMIDIGIK------PYLVGSSLSLVMAQRLVRKICKYCIKDYIPTEQEIQDAG 478 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR +FELL P + +I EG L + + Sbjct: 479 LTPEEASKINFKIGTGCVHCDNTGYSGREGIFELLTINPEIRRIIYEGGNQDL--IREAA 536 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM T + ++ +G Sbjct: 537 LRNGMRTLHDAAITKMKKGI 556 >UniRef50_B1ZZG0 Type II secretion system protein E n=4 Tax=Verrucomicrobia RepID=B1ZZG0_OPITP Length = 550 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 102/380 (26%), Positives = 162/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 ++ I+A +V+ SD+H + R+RI G + ++ + + Sbjct: 163 VQSIIAQAVRRRASDIHWEPLERRFRVRYRIDGVLVEVENPPKRLQLAVVSRIKIMANIS 222 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ--LEQLGAPTV- 111 L ++G++ + + LR S HG S+ +R+L + L +LG Sbjct: 223 IAEKRLPQDGRIAITID-GQALDLRVSTLPTAHGESVVMRILDKASLRRGLPELGFAADD 281 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LL +G++LVTG TGSGK+TTL A + LN D ++T+EDP+EY Sbjct: 282 QARFERLLALPDGMVLVTGPTGSGKTTTLYACLQRLN-LPDRKLITVEDPIEYQLTGINQ 340 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + E G+ TFA+ LRA LR+ P+++++GE+RD ET +A+ AA TGHLV +TLHT Sbjct: 341 VPVRPEAGV---TFAAALRAILRQAPNIVMIGEIRDLETAEIAIHAALTGHLVFSTLHTN 397 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLE---------------------- 266 A AV RL+D +A +LRAVL+Q+L Sbjct: 398 DAVGAVTRLIDLGVK------PFLVASALRAVLAQRLVRKTCEKCAHPYEPPTAFLAALN 451 Query: 267 ---------------------VDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR +FELL + LI + + Sbjct: 452 IPPAVASAARFRRGTGCPACLRTGYRGRTGIFELLEIDDELQRLIHAR--SRTALLRAHA 509 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM + + + G Sbjct: 510 RAAGMRSLAEDGARQASAGL 529 >UniRef50_Q2LUL4 General secretion pathway protein E n=4 Tax=Deltaproteobacteria RepID=Q2LUL4_SYNAS Length = 784 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 94/392 (23%), Positives = 158/392 (40%), Gaps = 81/392 (20%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP-----ARWRIRGRMEAAPFDTPDVEELLREWLD---- 53 + +I+ + SD+H+ R+R+ G + L + Sbjct: 393 VNKIINDAYFRRSSDIHIEPNVAKKNVDIRFRVDGDCSLYQTVPFNYRAALVSRIKIMSN 452 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHG-ISLALRLLPS-HCPQLEQLGAPT 110 D + ++G++ F + LR + + + +R+L LE +G Sbjct: 453 LDITVKRIPQDGKIKFKSVNGDEIELRVATIPTQGNVEDVVMRILAKGETLPLEAMGMMD 512 Query: 111 ----VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 + ++L+ G++LV G TGSGK+TTL A + ++N + I T EDPVE Sbjct: 513 RNYGEMLKILEKPYGMVLVVGPTGSGKTTTLHAALRHINT-PERKIWTAEDPVEITQYGL 571 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 R + Q +IG FA+ +RA LR DPDVI++GE+RD ET + + A+ TGHLV +TLH Sbjct: 572 RQVQVQPKIGFD---FAAAMRAFLRADPDVIMVGEMRDFETAKTGVEASLTGHLVFSTLH 628 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLE-------------------- 266 T A + + RL+D + +L +L+Q+L Sbjct: 629 TNSAPETITRLLDMGID------PLNFSDALLCILAQRLVRTLCKKCKEAYHPTRAEYDE 682 Query: 267 ---------------------------------VDKQEGRVALFELLINTPAVGNLIREG 293 +GR+ + ELLI + ++ LI+ Sbjct: 683 IAESYGLEHFARLNLPYTDDFVLYRPKGCDACDRTGYKGRMGIHELLIGSDSIKRLIQ-- 740 Query: 294 KTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 K + + +T GM T Q + +G Sbjct: 741 KHADIDTMRETAIVEGMTTLLQDGIRKAIQGM 772 >UniRef50_A8ZU34 Type II secretion system protein E n=4 Tax=Deltaproteobacteria RepID=A8ZU34_DESOH Length = 605 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 96/379 (25%), Positives = 157/379 (41%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + ++ + SD+H+ R RI G + V L + D Sbjct: 227 VNHLFSYALDQHASDIHIEPKRDITMVRMRIDGVLHTIYKIPKKVHYALVSRIKNLARMD 286 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV- 111 ++G++ +R S G + +R++ LE LG Sbjct: 287 MAEKRRPQDGRIK-TDKGGSEAEVRVSTIPVAFGEKVVMRIMDPDILFQPLEGLGFSAEE 345 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++ NG+ILV G TGSGKSTTL + + YL D +I T+EDP+E ++ Sbjct: 346 MNIYQQMANRPNGIILVCGPTGSGKSTTLYSTLRYL-STPDVNITTVEDPIEMVHEDFNQ 404 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +G+ TF S LR LR+DPD+I++GE+RD ET + A+ A+ TGHLVL+TLHT Sbjct: 405 ISVQPTVGI---TFGSILRNILRQDPDIIMIGEMRDLETAQNAIQASLTGHLVLSTLHTN 461 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RL+D + +L V+SQ+L Sbjct: 462 DAPSSIIRLLDIGVPN------FLVQATLVGVVSQRLVRRICPYCREPIEIDAAEFETMG 515 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR +FELL T A+ L + + Sbjct: 516 IQTGKRGKLKLYKGKGCTKCRGTGYKGRTGIFELLPYTEAIRALTL--PQTDMAKIQAKS 573 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ GM+T +++ ++ G Sbjct: 574 REEGMMTLREAAVKKMLRG 592 >UniRef50_B3U4T7 Type II secretion system protein E n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4T7_9BACT Length = 770 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 102/391 (26%), Positives = 161/391 (41%), Gaps = 81/391 (20%) Query: 4 EEIVALSVKHNVSDLHLCSAWP-----ARWRIRGRMEAAPFDTPDVEELLREWLD----- 53 +I+A + + SD+H+ R+R+ G P + L Sbjct: 380 NQIIADAFRQGTSDIHIEPYGEKRDTLVRFRVDGDCFEYMKIPPSYRRAIVSRLKIMASL 439 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQR-HGISLALRLLP-SHCPQLEQLGAPT- 110 D ++G++ F + + LR + + + +R+L S ++++G Sbjct: 440 DIAERRKPQDGKIKFKIGENKEIELRVATIPTAGYNEDVVMRILAASEPLPVDKMGFSER 499 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + + + G+IL G TGSGK+TTL +++GY+N D I T EDPVE R Sbjct: 500 NLREIKSIAEKPYGIILCVGPTGSGKTTTLHSVLGYINT-PDIKIWTAEDPVEITQYGLR 558 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + +IG TFA+ +RA LR DPDVI++GE+RD ET + A+ TGHLVL+TLHT Sbjct: 559 QVQVHSKIGF---TFAAAMRAFLRADPDVIMVGEMRDKETADTGIEASLTGHLVLSTLHT 615 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A + + RL+D A ++ VL+Q+L Sbjct: 616 NSAVETITRLLDMGCDS------FSFADAMLGVLAQRLARRICKDCREAYQPSKEEYEEL 669 Query: 269 --KQE--------------------------------GRVALFELLINTPAVGNLIREGK 294 GRVAL ELL+ T + LI+ Sbjct: 670 RLGYGPEYWDTLGVKFDANFRLYRGKGCDTCNRTGLKGRVALHELLLGTDQMKKLIQNK- 728 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 + +++TG GM T Q +V +G Sbjct: 729 -AKTDEMLKTGMAEGMTTLVQDGIQKVLQGH 758 >UniRef50_UPI0001BC4418 general secretion pathway protein E n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC4418 Length = 531 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 96/377 (25%), Positives = 159/377 (42%), Gaps = 70/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDDDQ--- 56 + I+ V+ SD+H+ R+RI G + + ++ + L Sbjct: 155 LSAIIIQGVERGASDIHIEPGKDYIRIRYRIDGILTETEKISLELLSPMISRLKIISNLD 214 Query: 57 --RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPT-V 111 + ++G+ D + R S +G +R+L + E ++G Sbjct: 215 ITERRMPQDGRFDLEIR-ERKIDFRVSVMPVINGEKAVIRILDKEIIEFEIDKIGMEKSD 273 Query: 112 LPELL---KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LL +NG+ L++G TGSGKS+TL A++ LN + +I T+EDPVEY Sbjct: 274 YDRLLFQLNRKNGIFLISGPTGSGKSSTLYALLKKLNT-GEVNISTVEDPVEYEIDGINQ 332 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + IG TFAS LRA LR+DPD++++GE+RD ET +A+ AA TGHLVL+T+HT Sbjct: 333 VQCKNNIGR---TFASVLRAYLRQDPDILMVGEIRDQETAEIAVKAAITGHLVLSTIHTN 389 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + + RL++ ++ SL A+LSQ+L Sbjct: 390 DSIGGINRLLNIGIQ------PYMVSASLIAILSQRLVRKLCPHCQEKDEKWKAKIQLLG 443 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR A+FE+ + +I +G + Q + + Sbjct: 444 HDYEKYHENMFYIGKGCESCNYSGYKGRTAIFEIFEPNEKIKEMIEKGNSAQ--EIEKEA 501 Query: 306 QQVGMITFQQSYQHRVG 322 GM + +V Sbjct: 502 LNDGMKKLVEDGIEKVK 518 >UniRef50_B8GP69 Type II secretion system protein (Twitching motility protein) n=3 Tax=Proteobacteria RepID=B8GP69_THISH Length = 402 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 124/329 (37%), Positives = 200/329 (60%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M++E + L + N SDL PA +I G M V ++ E +D+ + Sbjct: 1 MSIEPYLKLMAQKNASDLFFTVGAPASVKIEGEMRPISRHTMAPGSVRDMAYELMDERKI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ +S+ E R R + + QR +S+ +R + S P +EQL P VL +L+ Sbjct: 61 QEFERTREMNIGISVEELGRFRVNIYVQRGEVSMVIRYIKSDVPSIEQLHLPHVLKDLVL 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 ++NGL+LV G+TGSGKST+LAAM+ Y N ++ HILT+EDP+EY + ++ ++ QRE+GL Sbjct: 121 NKNGLVLVVGSTGSGKSTSLAAMLDYRNANSYGHILTVEDPIEYSFTHRKSIVGQREVGL 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++ + LR A+RE PD+I++GE+RD ET+ ALT A+TGHLVL+TLH A QA++R+ Sbjct: 181 DTLSYENALREAMREAPDMIMIGEIRDRETMEAALTYADTGHLVLSTLHAVNANQALDRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 ++ FP + + L+ +++ ++SQ+L V K R+ E+L+NTP + LIR+G+ Sbjct: 241 INFFPPDSRRQILMDLSLNIKGIMSQRLVVTKDGKRMPATEVLLNTPYISELIRKGEISG 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + +I+ G VGM TF QS G + Sbjct: 301 IKDIIEKGASVGMHTFDQSLFELYKAGTI 329 >UniRef50_B0T702 General secretory pathway protein E n=1 Tax=Caulobacter sp. K31 RepID=B0T702_CAUSK Length = 559 Score = 382 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 104/382 (27%), Positives = 163/382 (42%), Gaps = 72/382 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ + + SD+H R+RI G + V+ + + Sbjct: 178 VNALISRAAELRASDIHAEPTEDGLKVRFRIDGVLVDQEILPHQVKAAFVSRVKVLANLN 237 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP--- 109 L ++G++ AV + LR + HG S+ LRLL L+ LG Sbjct: 238 IAERRLPQDGRMRLAVR-GQEIDLRVATAPTLHGESVVLRLLDRSNLSLDFDALGFDDTI 296 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++L +G++LVTG TGSGK+TTL A + LN ILT+EDP+EY A Sbjct: 297 LPSFQDVLARPHGIVLVTGPTGSGKTTTLYAALASLNS-PTRKILTIEDPIEYRLAGVNQ 355 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 +IGL TFA+ LR+ LR+DPDV+++GE+RD ET ++A+ +A TGH +L+TLHT Sbjct: 356 TQVSPQIGL---TFATALRSFLRQDPDVMMVGEIRDLETAQVAVQSALTGHTILSTLHTN 412 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV RL+D ++ ++ AVL+Q+L Sbjct: 413 SAAAAVTRLIDMGME------PFLISSTVNAVLAQRLVRRLCRSCRTSHVADARELSVLE 466 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR+A+ ELL + L+ + + + Sbjct: 467 AQAGERGRDPIRLWSAPGCADCGHAGFKGRLAILELLPVDDRIARLVLAR--AEAREIER 524 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 GM T Q + G Sbjct: 525 AAVAAGMRTMLQDGMAKAMAGL 546 >UniRef50_C8X3E6 Type II secretion system protein E n=2 Tax=Desulfovibrionales RepID=C8X3E6_DESRD Length = 785 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 103/392 (26%), Positives = 157/392 (40%), Gaps = 81/392 (20%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP-----ARWRIRGRMEAAPFDTPDVEELLREWLD---- 53 + ++ + K SD+H+ R R+ G + L + Sbjct: 393 VNSLLIEAWKRQASDIHIEPDSRNRSCTIRLRVDGTCHEFRKFRIGLARPLVSRVKIMAH 452 Query: 54 -DDQRAILLENGQLDFAV-SLAENQRLRGSAFAQRHG-ISLALRLLPS-HCPQLEQLGAP 109 D L ++G++ + + R + G + +R+L S LEQLG Sbjct: 453 LDIAERRLPQDGKIKLKLPGMNTVVEYRVATLPTVDGQEDVVMRVLSSGKPLPLEQLGLH 512 Query: 110 ----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 ++ GL+LV G TGSGK+TTL + V Y+N D I T EDPVE Sbjct: 513 SGVLEAFKRMVYRPYGLLLVVGPTGSGKTTTLHSAVSYINSS-DRKIWTAEDPVEITQTG 571 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 R L Q +IGL TFA+ LR+ LR DPDVI++GE+RD ET + + A+ TGHLV +TL Sbjct: 572 LRQLQVQPKIGL---TFAAALRSFLRADPDVIMIGEMRDEETAHIGVEASLTGHLVFSTL 628 Query: 226 HTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------- 268 HT A + + RL+D + A SL VL+Q+L Sbjct: 629 HTNSAPETITRLLDM------ELDPFNFADSLLCVLAQRLVKTLCPRCKKPYTPSAEEIE 682 Query: 269 -----------------------------------KQEGRVALFELLINTPAVGNLIREG 293 GR + EL++NT + I+ Sbjct: 683 ELRLEFGTNWETAVPEQWRAEPVLYQPHGCSSCLGGYRGRTGIHELMLNTGGLKTCIKHR 742 Query: 294 KTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 K + + + GM++ ++ +V EG Sbjct: 743 KPTE--ELRLQAVEDGMLSLKEDGLLKVIEGL 772 >UniRef50_A6Q5B1 General secretory pathway protein E n=3 Tax=Epsilonproteobacteria RepID=A6Q5B1_NITSB Length = 560 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 94/378 (24%), Positives = 153/378 (40%), Gaps = 71/378 (18%) Query: 6 IVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I+ S+ SD+H+ R R+ G + ++ L + D Sbjct: 182 IIEDSIHRRASDIHIEPDEKRSSVRVRVDGVLYETFVFDLEIYNALDTRIKLLGGMDISE 241 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV---- 111 ++G+ V + R S+ +G SL +R+L +LE+LG Sbjct: 242 RRKPQDGRFSLTVG-GKPFDFRLSSTPTIYGESLVMRILDREKVLLKLEELGFSPKNLDK 300 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 +++ G++L+TG TGSGK+TTL A + + + I+T+EDPVEY + + Sbjct: 301 FLDVIHEPYGIVLITGPTGSGKTTTLYAALNEI-KSIHNKIMTVEDPVEYRLPLVQQVQV 359 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 + GL TFA +++ LR+DPDV+L+GE+RD ET+ + AA TGHLV ATLHT A Sbjct: 360 NEKAGL---TFAVAVKSFLRQDPDVMLIGEIRDFETLNASAQAALTGHLVFATLHTNDAP 416 Query: 232 QAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------------ 267 A+ RLV +A +L +++Q+L Sbjct: 417 GAIPRLVQMG------LKPYMIADALIGIVAQRLVRKICPYCKAEYKPPLSLLKKIEQYL 470 Query: 268 -------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 GR + E+L+ + LI EG T ++ + Sbjct: 471 PKDKEVHFYHGKGCAKCDFTGYFGRTMIAEILVVDDEIARLISEGATK--FEILHYAMEQ 528 Query: 309 -GMITFQQSYQHRVGEGR 325 Q + +G Sbjct: 529 TDFEPMVQDGIKKALQGI 546 >UniRef50_C3RLB1 Twitching motility protein n=3 Tax=Bacteria RepID=C3RLB1_9MOLU Length = 347 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 135/327 (41%), Positives = 198/327 (60%), Gaps = 4/327 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRM--EAAPFDTPDVEELLREWLDDDQRAIL 60 + EI+ S + SD+H+ + + R G + F ++ +++ E + + Sbjct: 2 INEILKASRNNKCSDIHISANTGIKVRQDGLLADYPIEFPQNELIKMIMELIPKRLIDNV 61 Query: 61 LENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSEN 120 + DF + E R R + + ++ I A+R++ LEQL PTVL ++ Sbjct: 62 DRHEDADFVYHVWEE-RYRVNIYYEQTNICAAIRVINDEILTLEQLEMPTVLNQIAMEPR 120 Query: 121 GLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCM 180 GL+LVTG TGSGKSTTLAAM+ +N+ + HILT+EDP+EY+Y ++ LI QREIG Sbjct: 121 GLVLVTGPTGSGKSTTLAAMIDLVNKQRNCHILTIEDPIEYVYKQKQALIHQREIGEDVK 180 Query: 181 TFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDS 240 F LR+A+REDPDVIL+GE+RD ETI +T AETGHLV +TLHT GAA+ ++R++D Sbjct: 181 DFDMALRSAMREDPDVILVGEMRDYETISAVITLAETGHLVFSTLHTIGAAKTIDRIIDI 240 Query: 241 FPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLP 299 FP ++ VR QL+G L AV++Q L GRVA E++ AV NLIR+ K HQ+ Sbjct: 241 FPQHKQAQVRTQLSGVLNAVITQTLLPHASGIGRVAAVEIMRANDAVRNLIRDNKGHQIN 300 Query: 300 HVIQTGQQVGMITFQQSYQHRVGEGRL 326 VIQTG++ GMI+ + + V EG++ Sbjct: 301 SVIQTGKKEGMISLNHALANLVREGKI 327 >UniRef50_A7C206 Bacterial type II secretion system protein E n=2 Tax=Beggiatoa RepID=A7C206_9GAMM Length = 484 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 100/378 (26%), Positives = 163/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ S+ + SD+H R R+ G M V + + D Sbjct: 107 VNHLMERSLDLSASDIHFEPEEKYLKVRCRVDGVMVNLEHLPVSVISAVSSRVKLMARLD 166 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVL 112 L ++G++ + + +R S HG S+ LR+L L LG P + Sbjct: 167 IGEKRLPQDGRIQYQMG-ERLLDMRVSTLPGVHGESIVLRILDRSDIQVDLAHLGMPKDV 225 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +++ +G++LVTG TGSGK+TTL A + +N I T+EDPVEY Sbjct: 226 LKPYSQIIQQPHGIVLVTGPTGSGKTTTLYATLAKINTGKQKTI-TVEDPVEYQLEGITQ 284 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL F++GLR+ +R+DPD+I++GE+RD ET +A+ +A TGHLV +TLHT Sbjct: 285 IHVNSKIGLD---FSAGLRSIVRQDPDIIMIGEIRDRETAEIAIESALTGHLVFSTLHTN 341 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A+ RL D ++ S+ AV++Q+L Sbjct: 342 DAAGAITRLQDMGIDT------YLISSSVIAVMAQRLVRKICVNCTEEDMLTDEEADLLG 395 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GRV L+ELL + + ++I G + + Sbjct: 396 IDLMQFPQLMRGMGCERCANTGYRGRVGLYELLQVSDPIRHVI--GGGGDANQIRNKAIE 453 Query: 308 VGMITFQQSYQHRVGEGR 325 M T +Q ++ +G Sbjct: 454 EKMRTLRQDALEKLYQGI 471 >UniRef50_B4D852 Type II secretion system protein E n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D852_9BACT Length = 569 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 105/381 (27%), Positives = 169/381 (44%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDT--PDVEELLREWLD---- 53 + +I+ +++ +D+H+ R+RI G + ++ + L Sbjct: 182 VNQIIREAIQERATDIHVEPLENDLRIRYRIDGILHEVAVPGQLRVLQSAIISRLKVMAH 241 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH---CPQLEQLGAP 109 D L ++G+++ +R S +G S++LRLL + L++LG Sbjct: 242 MDIAERRLPQDGRINLNTHQG-AIDVRVSTIPTVNGESISLRLLSRNESLSFALDRLGMS 300 Query: 110 TV----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS 165 + LL+ NG+ILVTG TGSGKST+L + +N I+T+E+PVEY A Sbjct: 301 DAQMKMIRALLQEPNGIILVTGPTGSGKSTSLYCFLSSINA-VSRRIITIEEPVEYRLAG 359 Query: 166 QRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATL 225 + + EIGL TFA+GLRA LR+DP+++++GE+RD ET +A+ AA TGHLV +TL Sbjct: 360 VSQIEVKSEIGL---TFANGLRAILRQDPNIVMVGEIRDFETAEIAIRAAMTGHLVFSTL 416 Query: 226 HTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------ 267 HT A + RL+D LA +R L+Q+L Sbjct: 417 HTNDAVSGITRLLDMGIE------PFLLASVVRCFLAQRLVRTICPDCKAEASYLPEYLR 470 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR+A++E+ + + LI + + + Q Sbjct: 471 EINAPIPADSKLYRGKGCEHCRQTGYRGRMAIYEVCVVNENLRRLIIRKEPGSV--LKQR 528 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 GM T +Q RV G+ Sbjct: 529 AAMDGMDTLRQDGWRRVLLGQ 549 >UniRef50_A1WFR3 Type II secretion system protein E (GspE) n=8 Tax=cellular organisms RepID=A1WFR3_VEREI Length = 578 Score = 381 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 166/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ + SD+HL R+RI G + P + + + D Sbjct: 195 VNTIIGRVIDLRASDIHLEPFDDGLHVRYRIDGVIHPGELVPPRLSAAVNSRVKLLAHLD 254 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 L ++G++ + LR S HG S+ +R+L +LE +G Sbjct: 255 IAERRLPQDGRIKTRLK-GRELDLRVSTVPTVHGESVVMRVLDRASVRLELESMGFEPDT 313 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L LL +G++LVTG TGSGK+TTL A + ++ + I+T+EDPVEY A Sbjct: 314 LARLATLLARPHGILLVTGPTGSGKTTTLYAALTKIDA-GEQKIITVEDPVEYQLAGINQ 372 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L TFA+ LR+ LR+DPD+I++GE+RD ET ++A+ +A TGHLVL+TLHT Sbjct: 373 IQVHTQIDL---TFANALRSILRQDPDIIMIGEMRDGETAQIAVQSALTGHLVLSTLHTN 429 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA AV R+ D + ++ VLSQ+L Sbjct: 430 TAAGAVVRMQDMGVE------PYLITSAVNGVLSQRLVRTLCEHCKQAHDPGPEIRQRTG 483 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + ELL+ ++ I EG+ + H + Sbjct: 484 LARFCAAGQPVYRAVGCEHCRQSGYRGRTGIHELLLLDDSLRRAIIEGRDANILHAM--A 541 Query: 306 QQVGMITFQQSYQHRVGEGR 325 Q GM++ + +V GR Sbjct: 542 VQGGMLSLYEDGLRKVAAGR 561 >UniRef50_C4Z961 Predicted ATPase involved in pili biogenesis, PilT-like protein n=5 Tax=Bacteria RepID=C4Z961_EUBR3 Length = 358 Score = 381 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 126/331 (38%), Positives = 193/331 (58%), Gaps = 5/331 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRME---AAPFDTPDVEELLREWLDDDQR 57 M++++I+ + + SD+ + + P ++ +G ME + E + +R Sbjct: 6 MDVKKILKEATDNGASDIFIVAGRPLTYKSKGVMECLNEIRMIPKETFEFVTSIYALAER 65 Query: 58 --AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPEL 115 + E G DF+ ++ R R S F QR S +R++ P+ L P + EL Sbjct: 66 DISKFEETGDDDFSFAIPGVSRYRVSTFKQRGSYSAVIRVISFTLPKPSDLHIPDSVMEL 125 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 ++ NG++LVTG GSGKSTTLA ++ +N + HI+TLEDP+E+L+ +C++ QREI Sbjct: 126 AETNNGMVLVTGPAGSGKSTTLACIIDQINHEKEEHIITLEDPLEFLHRHDKCIVSQREI 185 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 ++ + LRAALR+ PDVILLGE+RD ETI A+TAAETGHL+ ++LHT GAA ++ Sbjct: 186 NTDTESYLTALRAALRQSPDVILLGEMRDYETINTAVTAAETGHLIFSSLHTIGAANTID 245 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R++D+FPA ++ + QLA L+AV+ QKL V FE+++ TPA+ NLIREGK Sbjct: 246 RIIDAFPASQQHQIAIQLASVLQAVVCQKLLPATNGEMVPAFEIMVLTPAIRNLIREGKV 305 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ +I T MI S + G + Sbjct: 306 HQIDGIIYTSAAENMIAMDTSIFNLYKAGVI 336 >UniRef50_Q1YQV4 Putative general secretion pathway protein E n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQV4_9GAMM Length = 492 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 111/376 (29%), Positives = 168/376 (44%), Gaps = 67/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++A S+K N SD+H+ R+R+ G + + + LL + D Sbjct: 119 LNAVIAESLKENASDIHIEPYEKEALVRFRLDGVLRTVLTPSIQIAPLLISRIKVMSKLD 178 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 L ++G++ + + LR S HG + +RLL +L + LG P Sbjct: 179 IAERRLPQDGRMGVRLG-GRSIDLRVSTMPSSHGERVVMRLLDKDAGKLKTDDLGMPQDT 237 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L +L+ +G+ILVTG TGSGK+TTL A + +++ +I+T+EDPVEY Sbjct: 238 KAELVDLVSRPHGIILVTGPTGSGKTTTLYAALQQMDRQ-QRNIMTVEDPVEYDLPGISQ 296 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 G MTFA GLRA LR+DPDVIL+GE+RD ET +A A+ TGHLVL+TLHT Sbjct: 297 TQINLRAG---MTFARGLRAILRQDPDVILIGEIRDGETAEIATQASLTGHLVLSTLHTN 353 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A+ RL D LA ++R ++SQ+L Sbjct: 354 TAAGAITRLQDLGVDS------FLLASTVRGIVSQRLLRKLCTDCRVSEQPNEFNRNLLQ 407 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR ALFEL+ + LI E +++ + Sbjct: 408 LQPGEEIFQSSGCSECNNTGFKGRQALFELVSVDANLQTLIHENAGEL---ELESAIRKT 464 Query: 310 MITFQQSYQHRVGEGR 325 + + + + V G Sbjct: 465 VPSIRDAGFELVRRGV 480 >UniRef50_Q15QV0 Type II secretion system protein E n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15QV0_PSEA6 Length = 545 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 99/373 (26%), Positives = 161/373 (43%), Gaps = 63/373 (16%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + IV +V+ SD+H+ ++ R+R+ GRM + + D Sbjct: 169 VNSIVERAVQAESSDIHIEASSKNMLVRFRVDGRMVEFMQQPMARFPAIASRIKLLAQLD 228 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTV- 111 L ++G+ + + +R S HG S+ +RLLP L+ LG + Sbjct: 229 IAERRLPQDGRFTVR-ASNKEFDVRVSTAPDVHGESIVMRLLPKKRDELSLDILGFESDH 287 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + E + NG++LVTG TGSGKSTTL ++ + + I+T+EDPVEY Sbjct: 288 LALIREWGELNNGIVLVTGPTGSGKSTTLYGLLSDI-KTGAEKIVTVEDPVEYQLDGITQ 346 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IG TFA LR LR+DPDVI++GE+RD ET +A+ ++ TGHLVL+TLHT Sbjct: 347 VQARPDIG---YTFARALRTFLRQDPDVIMVGEIRDKETADIAVQSSLTGHLVLSTLHTN 403 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A RL D +A +++ V +Q+L Sbjct: 404 DACSVFPRLTDIGVE------PFMVAATIQGVQAQRLVRKLCSHCSEPTEAPTFLDEKLN 457 Query: 268 ---------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMIT 312 GR+ ++EL+ + A+ +LI + L + ++ G + Sbjct: 458 QGDWRKPVGCKLCQGRGYRGRMGVYELVPVSSAMRDLIT--HSAPLSEIRALARRSGSRS 515 Query: 313 FQQSYQHRVGEGR 325 + G Sbjct: 516 LLDDGLLKASRGV 528 >UniRef50_B2ULW5 Twitching motility protein n=17 Tax=cellular organisms RepID=B2ULW5_AKKM8 Length = 360 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 144/332 (43%), Positives = 203/332 (61%), Gaps = 8/332 (2%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA-----PFDTPDVEELLREWLDDDQ 56 +++ + L ++ SD+HL WR G++ D E L R +L+D + Sbjct: 8 HVDGYLKLGQDYDCSDIHLAVNSRPTWRRFGQLLPIWEEAPNLTPQDTEVLARGFLEDPE 67 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTV-LPEL 115 L + G +DFA + + R R S QR G + R++ + +E++G PT + L Sbjct: 68 WNRLQQRGDVDFAYA-NDFGRYRASVVKQRLGYDICFRIINTRVRTMEEIGLPTEYVVPL 126 Query: 116 LKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + NGLILVTG+ GSGKSTTLA++V ++NQ HI+TLEDP+EYL S+ C + QRE+ Sbjct: 127 TRYTNGLILVTGSVGSGKSTTLASIVDFINQDRHDHIITLEDPIEYLIPSKNCHVNQREV 186 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 H +FA LR ALREDPDVI++GE+RD ETI LALTAAETGHLVL TLHT AA+ V+ Sbjct: 187 HKHTESFARALRGALREDPDVIMVGEMRDLETISLALTAAETGHLVLGTLHTGSAARTVD 246 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGK 294 R++D FP +++D +R ++ SLR ++SQ+L GR E+L+NTPA+ N IREGK Sbjct: 247 RVLDVFPVEQRDQIRIMVSESLRGIISQQLVPRADGNGRALAIEMLVNTPAIANCIREGK 306 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 T +P IQTG+ GMI S + G + Sbjct: 307 TFMIPGCIQTGKAQGMILMDDSLRALHQAGLI 338 >UniRef50_B9JMG1 Pilus assembly secretion ATP-binding protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JMG1_AGRRK Length = 538 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 104/357 (29%), Positives = 162/357 (45%), Gaps = 47/357 (13%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ +V +D+H+ + R R G ++ + + Sbjct: 180 VSRILQRAVDEKATDIHIEPLEDSIRIRLRRDGLLDTLEIVPKFNAAAVTSRIKILSRLN 239 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++G+L ++ + R S HG ++ LR+L +L+ LG Sbjct: 240 ISERRLPQDGRLRASIR-GQEVDFRVSVMPSIHGETIVLRILDRSNIRLDLAALGYQPES 298 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +++ NG++L+TG TGSGK+TTL +++ +N A + I T+EDPVEY A Sbjct: 299 MATIARIVRRPNGIMLLTGPTGSGKTTTLYSILSDIN-DAKSKIFTVEDPVEYRLAGVTQ 357 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 L + IGL TFA+ LR+ LR+DPD+ILLGE+RD ET R+A+ AA TGHLVL+TLHT Sbjct: 358 LQVEPSIGL---TFATALRSVLRQDPDIILLGEIRDPETARIAVQAALTGHLVLSTLHTN 414 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA A+ RL + LA +LR ++ Q+L Sbjct: 415 SAAGAINRLREMGVES------YLLAATLRGIIGQRLLRKACPDCSSHPAGIRCETCNGA 468 Query: 269 KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 GR A++E+L T + I + + GM Q + V G Sbjct: 469 GYSGRRAVYEILEVTEPIREAIGRDLIQ--SEIENLAIKEGMRPLAQQARELVAAGM 523 >UniRef50_C1SHL1 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHL1_9BACT Length = 482 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 103/378 (27%), Positives = 161/378 (42%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + + K+ SD+H + R+RI G++ ++E + + D Sbjct: 105 VNQTIIQAAKNGASDIHFEGLTGKFAVRFRIDGKLHTVKQYPKSLQESIIARIKVVSDLD 164 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAP--- 109 ++G+++ + + +R S G LR+L +++ G P Sbjct: 165 VAETRKAQDGRINLRIG-NRDVDIRVSTVPSVTGEKAVLRILEKSKSLVTIDKTGLPENL 223 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +K NG+ILVTG TGSGK+TTL A + L D +I+T+EDPVEY Sbjct: 224 VPRFRKAIKRPNGIILVTGPTGSGKTTTLYAALQELVSD-DTNIMTIEDPVEYQMEKITQ 282 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + R + + TFAS +RA LR+DPD+IL+GE+RD+ET + A+ A+ TGHLVL+TLHT Sbjct: 283 VQVNRTVDI---TFASAVRAFLRQDPDIILIGEIRDTETAQAAIQASLTGHLVLSTLHTN 339 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV RL+D L+ S+ AVL Q+L Sbjct: 340 NAPTAVARLIDMDVE------PFLLSSSIVAVLGQRLVRKLCPHCRKEVSAEQYVKDFFM 393 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+ +FE+L T + LI E + + + Sbjct: 394 IEGLEIEKYYEPVGCDRCLHTGFSGRLGVFEMLTITDGIRKLINERADS--SAIAKEARN 451 Query: 308 VGMITFQQSYQHRVGEGR 325 G V G Sbjct: 452 AGYKPMMCHGYEMVSSGI 469 >UniRef50_C0QQ17 Type IV pilus assembly protein TapB n=2 Tax=Bacteria RepID=C0QQ17_PERMH Length = 558 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 98/390 (25%), Positives = 159/390 (40%), Gaps = 80/390 (20%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ ++ +D+H+ +RI G M + + D Sbjct: 171 IDTVLNHAIIDRATDIHISPESAASHIFFRIDGIMRHYYAFPKSTHNAVVSRIKVLANLD 230 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPTVL 112 L ++G E+ +R S +G ++ +R+L L+ LG + Sbjct: 231 IAEQRLPQDGAFTHTF-FNESFDMRVSTIPTAYGENVVIRVLSKNLSLFNLKSLGFEDDM 289 Query: 113 PELLK----SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+ G++LVTG TGSGK+TTL A + +N + +ILT EDPVEY + + Sbjct: 290 LSQLEEEFLKPQGIVLVTGPTGSGKTTTLYAALRRINA-LERNILTAEDPVEYRFPFIKQ 348 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + G TFA +R LR+DPDVIL+GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 349 TQVNEKAG---YTFARAIRHFLRQDPDVILVGEIRDEETAEMAMRASITGHLVLSTLHTN 405 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL+D +A + A+ +Q+L Sbjct: 406 DAVSAIPRLIDMKIKD------YMVASGVSAITAQRLVRKTCPFCMEEEIIDIEDLKSYG 459 Query: 268 --------------------------------DKQEGRVALFELLINTPAVGNLIREGKT 295 GR + ELL + +LI +G T Sbjct: 460 FSEDSIKRYGSDYIDDGKVKIYRGKGCEHCKGTGYLGRTVIAELLKIDEDIADLIVKGST 519 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 ++Q ++ GM T ++ +V +G Sbjct: 520 P--LGIVQKAREKGMRTLKEDGLIKVFKGV 547 >UniRef50_Q3KLC6 General secretion pathway protein E n=14 Tax=Chlamydiales RepID=Q3KLC6_CHLTA Length = 501 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 90/378 (23%), Positives = 156/378 (41%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +++ SD+H R+RI G + + L + D Sbjct: 122 LNLILKEAIEERASDIHFDPVEDLLRIRYRIDGVLHDRHAPPNHLRAALITRIKVLTKLD 181 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 L ++G++ + + +R S HG + LR+L + L P Sbjct: 182 IAEHRLPQDGRIKLQLG-GQEIDMRVSTVPVIHGERVVLRILDKRNVILDIRGLCMPPKM 240 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + G++LVTG TGSGK+TTL +++ +L +I+T+EDP EY Sbjct: 241 ETSFRKAIGVPEGILLVTGPTGSGKTTTLYSVIQHL-SGPFTNIMTIEDPPEYKLPGVAQ 299 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TF+ GLR LR+DPDV+++GE+RD ET +A+ AA TGHLV++TLHT Sbjct: 300 IAVKPKIGL---TFSKGLRHLLRQDPDVLMVGEIRDQETAEIAIQAALTGHLVVSTLHTN 356 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RL+D L+ ++ ++Q+L Sbjct: 357 DAVSAIPRLLDMGVE------PYLLSATMIGAVAQRLVRRICTHCKEFCVADVQEQALLR 410 Query: 269 ----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GR ++E + T + + I G+ + + + + Sbjct: 411 ALGKDPFAPLCKGRGCSQCFRSGYKGRQGIYEFVDVTTTLRSEIALGRPYHI--LRGVAE 468 Query: 307 QVGMITFQQSYQHRVGEG 324 + G + G Sbjct: 469 REGYCPLLEHGVELALAG 486 >UniRef50_A6C2Q7 Twitching motility protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2Q7_9PLAN Length = 356 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 144/330 (43%), Positives = 204/330 (61%), Gaps = 4/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQR 57 M M +++ +V N SD+ L +RI G ++ P D + +L + L+ Q+ Sbjct: 1 MEMNDLLHAAVDSNASDILLAIDAAPMFRIDGTLKKTALEPLDPVTISDLCDQVLNPQQK 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 IL +DFA+++ R R + QR + A+R + L L P V+ EL + Sbjct: 61 EILDRQKDVDFAITIPRLGRFRFNIHVQRGTYAAAIRRFSNEICSLSSLDLPPVVEELTR 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLILVTG TGSGKSTTLAAMV +NQ HI+TLEDP+EY + R LI+QREIG Sbjct: 121 LKTGLILVTGQTGSGKSTTLAAMVEAINQRDAKHIITLEDPIEYQFQHGRSLIEQREIGE 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 C FASGL+ LR+DPDVIL+GELRD +TIR+AL AAETGHLVL++LH AA V+RL Sbjct: 181 DCPGFASGLKHVLRQDPDVILIGELRDLDTIRVALQAAETGHLVLSSLHVSSAAGVVDRL 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTH 296 V+ FP +E+ VR+ LA +LR V++QKL GRVA E+++ AV IRE +H Sbjct: 241 VEVFPPEEQSQVRSHLAETLRGVITQKLLPAADGNGRVAALEIMLMNRAVQTSIRESTSH 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +P +I T +++GM T +Q+ + ++ G++ Sbjct: 301 LIPGIISTSRRMGMQTMEQALKEQLLNGKV 330 >UniRef50_D2R471 Type II secretion system protein E n=6 Tax=Planctomycetaceae RepID=D2R471_9PLAN Length = 573 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 103/380 (27%), Positives = 163/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ +V+ SD+H+ R+RI G + + + + D Sbjct: 188 VQLMIGEAVQLRASDIHVEPFEEIVRIRYRIDGILHKRDSPPRRLLAAIVSRIKILAKMD 247 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 ++G++ V + LR S HG S+ +RLL ++ QLG Sbjct: 248 IAERRRPQDGRIKVTVG-EKELDLRVSIIPTNHGQSVVMRLLDKDNIKVGVRQLGFSEDM 306 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+K NG++LVTG TGSGK+TTL A + +N+ D I+T EDPVEY Sbjct: 307 FSTFQSLIKRPNGIVLVTGPTGSGKTTTLYAALNSMNR-PDKKIITAEDPVEYYLPGVNQ 365 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + IGL FA +RA LR+ P+VIL+GE+RDSET + + A+ TGHLV +TLHT Sbjct: 366 VEVRHSIGLD---FARIIRAMLRQAPNVILVGEMRDSETASMGIQASLTGHLVFSTLHTN 422 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV R+ D +A S+ AVL+Q+L Sbjct: 423 DAPSAVTRMTDMGVPG------YLVASSVIAVLAQRLVRLNCSRCKQPTTLSEAVLNDAG 476 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR +FEL++ + LI + + + + Sbjct: 477 ITPKMAAAATFMKGRGCGHCNKSGYKGRQGIFELMLIQSKIRELIFKNASS--TEIRRMA 534 Query: 306 QQVGMITFQQSYQHRVGEGR 325 ++GM T ++ +G Sbjct: 535 IKLGMKTLYSDGIYKTCKGI 554 >UniRef50_B0UAH1 Type II secretion system protein E n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UAH1_METS4 Length = 541 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 108/382 (28%), Positives = 164/382 (42%), Gaps = 72/382 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ +V+ +D+HL + R RI GR+ D+ + + D Sbjct: 162 IDALLERAVEVGATDIHLETGREELRVRLRIDGRLRLHQTLPKDMAPAIISRVKILAGLD 221 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAP--- 109 L ++G+ + V +E LR + +G + LR+L + ++G Sbjct: 222 IAERRLPQDGRTNVRVRASE-ADLRVAVMPTLYGETAVLRILVKDARLLDFARVGLSARD 280 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L +L +GLI+VTG TGSGK+TTLA V LN I+T+EDP+EY Sbjct: 281 RDALERMLGEPHGLIIVTGPTGSGKTTTLATAVSLLN-DPARKIVTVEDPIEYQIPGIHQ 339 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL TFA+ LR+ LR DPDVI++GE+RD ET + + AA TGHLVL TLHT Sbjct: 340 TQIKPGIGL---TFANALRSFLRHDPDVIMVGEMRDRETAAIGIQAALTGHLVLTTLHTN 396 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL D +A SLR V+ Q+L Sbjct: 397 SAPDAVIRLADMGVE------PYLIAASLRGVVGQRLVRRLCERCRAPDPDGGAALDAVC 450 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GRV +FE++ A+ LIR + +++ Sbjct: 451 ARRGFARPGGGRVHRPVGCPHCGGSGFRGRVGVFEVMPVDEALTGLIRREPDPLV--LLR 508 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 ++ GM T + + +G Sbjct: 509 AAREAGMTTMLEDGLAKAADGL 530 >UniRef50_C4Z3A4 Twitching motility protein PilT n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z3A4_EUBE2 Length = 349 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 134/330 (40%), Positives = 204/330 (61%), Gaps = 4/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT--PDVEELLREWLDDDQRA 58 M +++++ + SDLH+ + R G ++ + E++L + L+D+ Sbjct: 1 MELKQLIRKARSVQCSDLHITAGDFVAVRRFGELKLIDIKPTIEETEKMLFDILNDEDIR 60 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAP-TVLPELLK 117 + +D A S RLR + + QR ++ ++RLL ++ P E LG P +L EL Sbjct: 61 RVKNGEDIDVAASDESGGRLRINIYHQRRNLAASIRLLDANIPSFEDLGLPGKLLAELAS 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 +GL+LVTG TGSGKSTTLAAM+ Y+N + HI+T+EDP+EY+Y ++ +I QR++G Sbjct: 121 KRSGLVLVTGPTGSGKSTTLAAMIDYINNNMARHIITVEDPIEYVYGFKQSMIHQRQVGR 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 FAS LR+ALREDPDVIL+GE+RD ETI A+TAAETGHLV++TLHT+ AAQ VER+ Sbjct: 181 DVPNFASALRSALREDPDVILVGEMRDYETINAAITAAETGHLVMSTLHTKSAAQTVERI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-DKQEGRVALFELLINTPAVGNLIREGKTH 296 + + P + + + QL+ L V++Q L ++EGR+A E+++N AV NLI+E KT+ Sbjct: 241 ISACPIEAQPALTIQLSSILTGVITQTLVPFARKEGRIAATEVMLNNTAVANLIKEKKTN 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ V+Q+ GM T S + V + Sbjct: 301 QIQTVLQSNLSSGMHTLNYSLANLVKTRVI 330 >UniRef50_C8W5J2 Type II secretion system protein E n=2 Tax=Clostridiales RepID=C8W5J2_DESAS Length = 561 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 103/381 (27%), Positives = 164/381 (43%), Gaps = 72/381 (18%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 I++ ++ SD+H+ R+RI G + + L + D Sbjct: 183 NMILSQALSARASDIHIEPYEKNSRVRFRIDGVLHDIMQVPRKMHATLTSRIKVMANMDI 242 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVLP 113 + ++G++ + + LR + +G L LRLL LEQLG + Sbjct: 243 ADRRVPQDGRISLKIE-GRSVDLRVATLPTAYGERLTLRLLERSGTMITLEQLGIRESVL 301 Query: 114 E----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 E +K GLILVTG TGSGK+T+L A + ++ A +++T+EDPVEY + Sbjct: 302 EKYLATVKYPYGLILVTGPTGSGKTTSLYASLATIDTTA-KNVITVEDPVEYRIEGVSQI 360 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 ++GL TF +GLR+ LR DPD+I++GE+RD +T R+A +A TGHLVL+TLHT Sbjct: 361 PINTKVGL---TFETGLRSILRNDPDIIMVGEIRDKQTARIATESALTGHLVLSTLHTND 417 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV---------------------- 267 A A+ RL++ + SL VL+Q+L Sbjct: 418 APGAISRLIEMGIE------PFLIVSSLTCVLAQRLARVLCSHCKESYKLSRKELMNIED 471 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GRV +FE+L T + L E ++ + + Sbjct: 472 FPLSEQEEEISLYRPRGCIRCSNTGYRGRVGIFEVLFATEKIQQLTLEKRST--REIREV 529 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 GM + ++ +V +G Sbjct: 530 ALSEGMTSLRRDGLQKVKQGI 550 >UniRef50_C9RN76 Twitching motility protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RN76_FIBSS Length = 366 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 124/332 (37%), Positives = 196/332 (59%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRG---RMEAAPFDTPDVEELLREWLDDDQR 57 + +E+++ V SDLHL P +RI G R+ D+ ++ L + ++ DQ+ Sbjct: 4 LRIEQLLREMVNRKASDLHLRVGVPPVYRINGALQRLFDVRIDSAMMDSFLDDIMNRDQK 63 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 N + DFAV + R R + F QR I++ +R + + P E+L P ++ +L Sbjct: 64 QRFEANKECDFAVGARDMGRFRVNVFRQRGTIAVVIRHIKAVIPPFEELHLPEIIRDLAL 123 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GL+LVTG TGSGKSTTLA+M+ Y+NQ +++T+EDP+EYLY +I QREIG+ Sbjct: 124 TRRGLVLVTGTTGSGKSTTLASMIDYINQKESVNVITVEDPIEYLYRDNVAIISQREIGV 183 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 +++A+ LRAALR+DPDV+L+GE+RD ET+++ALTAA+TGH+V AT+HT A + + R+ Sbjct: 184 DTLSYANALRAALRQDPDVLLVGEIRDLETMQIALTAADTGHMVFATIHTTNAVETIHRV 243 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE-GKT 295 + +P + D +R LA L ++S +L K GRV E+L+NT A+ I++ K Sbjct: 244 LSMYPPHQHDEIRLLLAEVLVGIISLRLLPTKDGKGRVPAAEILVNTGAIKEYIQDKNKI 303 Query: 296 HQLPHVIQTG-QQVGMITFQQSYQHRVGEGRL 326 + + G Q TF Q+ ++ Sbjct: 304 DMVEQAVAEGHIQYHSQTFDQALLELYQNEQI 335 >UniRef50_Q5P275 Type IV fimbrial biogenesis protein,PilB n=15 Tax=Proteobacteria RepID=Q5P275_AZOSE Length = 571 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 91/380 (23%), Positives = 165/380 (43%), Gaps = 69/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 +++++ ++ SD+H + R R G + ++E + + D Sbjct: 192 IQKVLIDAINEGASDIHFEPYEKYYRIRVRTDGVLREIAQPPLILKEKIAARIKVISRLD 251 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAPTV- 111 + ++G++ +S ++ R S+ HG + +R+L + L + LG Sbjct: 252 ISEKRVPQDGRMKLVLSKNKSIDFRVSSLPTLHGEKIVMRILDASSAMLGVDALGYEPEQ 311 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L + ++ G+ILVTG TGSGK+ +L + LN+ A +I T EDP E + Sbjct: 312 KKILLDAIERPYGMILVTGPTGSGKTVSLYTCLNLLNK-AGVNISTAEDPAEINLSGINQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA+ LRA LR+DPD+I++GE+RD ET +++ AA+TGHLVL+TLHT Sbjct: 371 VNVNDKAGL---TFAASLRAFLRQDPDIIMVGEIRDLETAEISIKAAQTGHLVLSTLHTN 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A +ERL + +A S+ + +Q+L Sbjct: 428 DAPTTLERLKNMGV------APFNIASSVILITAQRLARRLCTCKQPVDIPIEALLQAGF 481 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR+ +++++ T + ++I + Sbjct: 482 PADELDGSWQPYGPVGCERCKGSGYKGRLGIYQVMPITDEIAHIIMTNGNS--MDIAAQA 539 Query: 306 QQVGMITFQQSYQHRVGEGR 325 Q+ G+ +QS +V +G Sbjct: 540 QREGVKDLRQSGLLKVRQGV 559 >UniRef50_A2C5L6 General secretion pathway protein E n=7 Tax=Cyanobacteria RepID=A2C5L6_PROM3 Length = 638 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 100/391 (25%), Positives = 157/391 (40%), Gaps = 84/391 (21%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFD-TPDVEELLREWLD----- 53 ++ I+ +++ SD+H+ R+R G ++ + + Sbjct: 212 VDRILLEALQTEASDVHVEPQQDGLQIRFRQDGVLQRYIEPLPSRLIPAVTSRFKIMADL 271 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVL- 112 D + ++G++ R ++ R+G + LRLL S P QLG ++ Sbjct: 272 DIAERRMAQDGRIRRTYR-NRMVDFRVNSLPSRYGEKICLRLLDSSAP---QLGLDKLIS 327 Query: 113 --------PELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYA 164 L G+ILVTG TGSGKSTTL +++ N+ +I T+EDP+EY Sbjct: 328 NPSALSLVRNLGSKPFGMILVTGPTGSGKSTTLYSLLAERNE-PGINISTVEDPIEYTLP 386 Query: 165 SQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLAT 224 RE G F++ LRA +R+DPDV+L+GE RD ET + A+ AA TGHLVL T Sbjct: 387 GITQCQVNREKGFD---FSTALRAFMRQDPDVLLVGETRDLETAKTAIEAALTGHLVLTT 443 Query: 225 LHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD---------------- 268 LH A+ A+ RL + ++ SL ++SQ+L Sbjct: 444 LHCNDASSAIARLNEMGVE------PFMVSASLIGIVSQRLLRRVCRSCRKSYHPTEKEL 497 Query: 269 ----------------------------------KQEGRVALFELLINTPAVGNLIREGK 294 +GRV ++E+L + + +G Sbjct: 498 GRFGLMAHTETGVTFFKAHHHGQEKQPCPNCQGSGYKGRVGVYEVLRMNEELATAVAKGA 557 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 T L V + + GM T V EG Sbjct: 558 TTDL--VRRLALEAGMKTLLGYSLDLVREGH 586 >UniRef50_C6Q9T1 Type II secretion system protein E n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6Q9T1_9RHIZ Length = 554 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 102/379 (26%), Positives = 156/379 (41%), Gaps = 69/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + +++ +V +D+H+ R R+ G + + + + + Sbjct: 176 VNQMIQNAVHARATDIHIEPFDGHVAIRIRVDGMLRDVTAPPAQMAKAIVSRVKILSGLN 235 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGA---- 108 L ++G+ ++ LR + HG ++A+RLL + LG Sbjct: 236 IAERRLPQDGRARIRINEHR-LDLRIATIPTVHGEAVAIRLLDNVRRMLDFAPLGFCAID 294 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + L + GL+LVTG TGSGK+TTLA + LN+ ILT+EDP+EY Sbjct: 295 EAEIRKHLSAPYGLMLVTGPTGSGKTTTLATALSLLNE-GHRKILTIEDPIEYELDGINQ 353 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL +FA LR+ LR DPDV+++GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 354 TQAKPSIGL---SFADALRSFLRHDPDVLMVGEMRDGETASIAIHAALTGHLVLSTLHTN 410 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA A+ RL+D LA SLR V+ Q+L Sbjct: 411 TAAGAIPRLLDMGIDS------FLLASSLRGVVGQRLVRVLCEHCKQPSDEVLSLGRAHG 464 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 GRV + E+L + LI+ L + Sbjct: 465 IDAVPEGSRHWRAVGCERCFGTGYSGRVVISEVLSVDDEIRELIQPNAQPALIEA--AAR 522 Query: 307 QVGMITFQQSYQHRVGEGR 325 + GM T + G Sbjct: 523 RKGMTTMIMDGLAKCLSGV 541 >UniRef50_B8E2U7 Type II secretion system protein E n=2 Tax=Dictyoglomus RepID=B8E2U7_DICTD Length = 561 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 98/377 (25%), Positives = 164/377 (43%), Gaps = 70/377 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++ N SD+HL R+RI G + ++++ + + D Sbjct: 180 VSSIINEAINRNASDIHLDPQEKEMKVRYRIHGILYDIMAIPKEIQDAVVTRIKVISGMD 239 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 ++G+ + LR ++ +G + +RLL +L++LG Sbjct: 240 IAEKRRPQDGRATYRYE-NRIFDLRVASIGTTYGEMVVIRLLDKTKVLIELDRLGMSDYD 298 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L++ G+ILVTG TGSGK+TTL + + LN+ + +I+TLEDPVEY Sbjct: 299 LKIFENLIRRPFGMILVTGPTGSGKTTTLYSALNVLNK-PEVNIITLEDPVEYALPGINQ 357 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +IG+ FA GLR LR DP++I++GE+RD+ET+ ++ AA TGHL+L+T H Sbjct: 358 IQIQPKIGID---FAVGLRNILRLDPNIIMVGEIRDTETLNTSIEAALTGHLLLSTFHAN 414 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + A+ RLV +A SL +++Q+L Sbjct: 415 DSVSAIARLVQMGVE------PFLIASSLIGIVAQRLVRTICLSCKEEYYPSPEEAEELG 468 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR +FE+L T + NLI G + + + Sbjct: 469 LTKEESKNITLARGKGCLFCNYTGYTGRTGVFEILRITKNIRNLITSGAS--IDEIRSAA 526 Query: 306 QQVGMITFQQSYQHRVG 322 GM T + + +V Sbjct: 527 LNEGMKTLFINAREKVL 543 >UniRef50_C6RE58 Twitching mobility protein n=2 Tax=Campylobacter RepID=C6RE58_9PROT Length = 750 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 115/329 (34%), Positives = 184/329 (55%), Gaps = 6/329 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLR---EWLDDDQRAI 59 ++ + ++ SDLH+ S+ R R G + D + + E L + + Sbjct: 368 LDGYLTKLIELGGSDLHVKSSKVVRGRFNGEIFTMGDKILDYDNSILLAKEILGANYYNL 427 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS- 118 + +DF L ++ R R + F Q G+S R +P+ P + +L P V+ +L Sbjct: 428 MKR-KSVDFTYKLNDDYRFRSNVFLQMDGVSFVFRTIPTKIPTMSELLLPPVIEKLCNKV 486 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 G++LVTG TGSGK+TTLA+M+ +LN + HI+T+EDP+E++Y + +I QR IG Sbjct: 487 NRGIVLVTGPTGSGKTTTLASMINHLNHTKNYHIVTIEDPIEFIYNDDKSVINQRGIGQD 546 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +FA LRA+LREDPDVI +GE+RD ET+R A+ AAETGHLVLATLHT A + + R++ Sbjct: 547 VDSFADALRASLREDPDVIFVGEMRDLETVRTAINAAETGHLVLATLHTLDAKETIGRVI 606 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + FP +E++ +R A A++SQ+L V R E+++ + ++I E + ++ Sbjct: 607 NMFPKEEQNRIRMTFASVAEAIISQRLVVTTTGKRRVACEIMVKNIRIRDMILEDRDSEI 666 Query: 299 PHVIQTGQQ-VGMITFQQSYQHRVGEGRL 326 I+ + GM TF+Q G + Sbjct: 667 YDAIEQSKNTYGMQTFEQHLLDMYTSGII 695 >UniRef50_A1AM74 Twitching motility protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AM74_PELPD Length = 361 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 125/328 (38%), Positives = 194/328 (59%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRAI 59 +E ++ V+ SD+HL R+R+ G ++A F + VE + +++ QR Sbjct: 8 LEVLLRTCVELGASDMHLSGGERVRFRVNGLLQAHGNELFSSDAVEAMATAIMNEHQRKE 67 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 D S ++ +R R + F + ++ +R L LE+LG P+ L EL Sbjct: 68 FFTRLTADIGYSSSDGERYRVNCFREMCKPAMTVRHLDQRLRSLEELGLPSRLRELAYLH 127 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 +GL+LVTGATGSGKS+TLA ++ +N+ D HILT+EDPVE+++ SQR L+ RE+ Sbjct: 128 SGLVLVTGATGSGKSSTLAMLLNEINRTRDCHILTVEDPVEFIHTSQRSLVHHREVHTDV 187 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++A +RAA+REDPDVI++GE+RD ET++ +L AAETGHLV +TLHT A A+ER + Sbjct: 188 PSYAEAVRAAMREDPDVIMVGEMRDLETMQASLAAAETGHLVFSTLHTGEAVGAIERFIG 247 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 F +E+ R+++A LRA+++Q+L + RV ELL+ A NLI+ +T QL Sbjct: 248 YFSGEEQAVARHRIAMVLRAIVAQRLVIGLDGRKRVPAVELLMVNTAAANLIQTSRTRQL 307 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 +++TG + GM T Q V ++ Sbjct: 308 YSMMETGAKDGMWTLDQDLARLVKSNKI 335 >UniRef50_Q1Q110 Strongly similar to general secretory system type II protein, ATPase component n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q110_9BACT Length = 571 Score = 378 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++ SD+H+ R+RI G + A ++++ + + D Sbjct: 191 VSLIINKAIVARASDIHVEPLLSKLRIRYRIDGVCQEAEVLPKNLQDSIISRIKILADMD 250 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP--- 109 ++G++ ++ +R S +G S+ +RLL ++ LG Sbjct: 251 ISEKRRPQDGRISL-YLSGKDMDIRVSCLPSIYGESIVMRLLEKSQTLMCIKNLGLCTSD 309 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++K NG+ L+TG TGSGK+TTL A++ LNQ I+T EDPVEY Sbjct: 310 FQRFQSIIKMPNGIFLITGPTGSGKTTTLYAIINELNQTG-VKIVTAEDPVEYTIKGVNQ 368 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 +IG TF LR LR+DP+VIL+GE+RD+ET +A+ +A TGHLVL+TLHT Sbjct: 369 SEVHDKIGF---TFPKILRTMLRQDPNVILVGEIRDTETADIAIASALTGHLVLSTLHTN 425 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RL+D + ++ SL+ +++Q+L Sbjct: 426 DAPSAITRLIDM------NIKPFLVSTSLQGIMAQRLVRAICHDCREQTHYTPEQITQMG 479 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR+ ++ELL + ++ + + + Sbjct: 480 FDPGMFTEYYFYKGKGCKKCNNIGFKGRIGIYELLEMNETMRDMAYNAASTD--EMRKAA 537 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM T ++ + EGR Sbjct: 538 KTAGMTTLKEDGIRKAKEGR 557 >UniRef50_Q0VM47 Type II secretion system protein, putative n=19 Tax=Gammaproteobacteria RepID=Q0VM47_ALCBS Length = 603 Score = 378 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 91/380 (23%), Positives = 154/380 (40%), Gaps = 69/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 ++ I+ + SD+HL R+RI G + + + L Sbjct: 218 VDWILQYAFSQRASDIHLEPRRETGKMRFRIDGVLHDVYELPAAIMAAVTSRLKILSRLN 277 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV- 111 ++G+L + LR S G + +R+ EQLG Sbjct: 278 VAEKRKPQDGRLKTKSPEGDEIELRISTLPTAFGEKMVMRVFDPDVLVRSFEQLGFSKED 337 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++ +G+I VTG TGSGK+TTL + + L + ++ T+EDP+E + +S Sbjct: 338 HDTWHQMTSHPHGIIFVTGPTGSGKTTTLYSTLKQLATS-EVNVCTIEDPIEMVESSFNQ 396 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q I + FA G++A LR+DPD+I++GE+RD +T +A+ AA TGHLVL+TLHT Sbjct: 397 MQIQANIDVD---FAQGVKAMLRQDPDIIMIGEIRDLQTADMAIQAALTGHLVLSTLHTN 453 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A +V RL+D ++ ++ V++Q+L Sbjct: 454 DAPSSVTRLIDLGV------APYMISATVLGVMAQRLVRTLCPNCKTATETDPQAWEELV 507 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+ ++E + + N I G L + + Sbjct: 508 RPFKMKMPATLYQPVGCLECRGTGYRGRMGVYETMPLRTTLKNHITRG--ADLETLTRAS 565 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + GM + S +V +G Sbjct: 566 LKEGMKPLRISGAIKVAKGL 585 >UniRef50_Q1CXQ0 Twitching motility protein PilT n=6 Tax=Deltaproteobacteria RepID=Q1CXQ0_MYXXD Length = 369 Score = 378 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 131/325 (40%), Positives = 197/325 (60%), Gaps = 4/325 (1%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRM---EAAPFDTPDVEELLREWLDDDQRAILLE 62 + + ++ SDLHL +P RIRG + P +++ LL E +Q+ ++E Sbjct: 9 LFDVLLEQKGSDLHLGIGYPPMGRIRGELVPLREQPLTAAEMQALLFEICSPEQQRQIVE 68 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 + LDFA S R R + F + G++ R +PS LE L P V+ +L + +GL Sbjct: 69 DLDLDFAYSYGTKARFRANYFNKMTGLAAVFRTIPSKVLSLEDLKTPEVVRKLSERRSGL 128 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LVTG TGSGKSTTLAAM+ ++N+ AH+LT+EDPVE+++ S R + RE+G H +F Sbjct: 129 VLVTGPTGSGKSTTLAAMINHINKTRPAHVLTIEDPVEFVHESMRAQVTHREVGPHASSF 188 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 A+ +R+A REDP+VIL+GELR +ET++LAL A G LV AT+HT A ++R++++FP Sbjct: 189 ATAIRSAGREDPNVILIGELRTNETMKLALQLASFGVLVFATVHTNSAPATIDRIINAFP 248 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQLPHV 301 A E+ VR LA SL +++Q+L GRVA E+L+ PA+ ++IREGK Q+ Sbjct: 249 ADEQQQVRGMLAESLAGIVAQQLIKTADGKGRVAALEILVGGPAIASMIREGKVFQIASK 308 Query: 302 IQTGQQVGMITFQQSYQHRVGEGRL 326 +Q GQ GM T + V + + Sbjct: 309 MQAGQGQGMQTLDMHLERLVKDDVI 333 >UniRef50_A6W755 Type II secretion system protein E n=3 Tax=Actinomycetales RepID=A6W755_KINRD Length = 591 Score = 378 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 107/379 (28%), Positives = 163/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I++ +V+ SD+HL S R+R+ G + V + + D Sbjct: 213 VNRILSDAVRLRCSDIHLESQRDQLRVRFRVDGLLRDVMSAPKRVAPSVISRIKIISGLD 272 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTV- 111 + ++G+ V R S HG + +RLL P L LG Sbjct: 273 ISERRIPQDGRTRVVVD-GAAIDCRVSTLPALHGEKIVIRLLTRGDDVPSLPSLGFEPEQ 331 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L GL+L+TG TGSGK+ TL A + + +I+TLEDPVE Sbjct: 332 LEIFEKALSVPQGLVLITGPTGSGKTNTLYAAIHA-TMSPEKNIITLEDPVEVQLPGITQ 390 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + ++G MTF++GLR+ LR+DPD++L+GE+RDSET LAL A+ TGHLVL TLHT Sbjct: 391 VQVHAKVG---MTFSAGLRSVLRQDPDIVLIGEVRDSETAELALKASMTGHLVLTTLHTN 447 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RLVD +A SL A ++Q+L Sbjct: 448 SAVGALTRLVDMG------AAPFLVASSLTAAIAQRLVRKPCDSCADGYIPDEDVLAVLD 501 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR A++E+L TP++ ++ T ++ Sbjct: 502 LTIEDILDATPLKGTGCPECGGTGYRGRTAVYEVLDVTPSMRKVLMHDATE--SALLAEA 559 Query: 306 QQVGMITFQQSYQHRVGEG 324 +++GM T +QS + G Sbjct: 560 ERIGMKTLRQSALEKAMRG 578 >UniRef50_B0MQV8 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MQV8_9FIRM Length = 563 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 99/379 (26%), Positives = 160/379 (42%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + IV S + N SD+H+ R R+ G + P L + Sbjct: 184 VNTIVETSFRMNASDIHIEPFKDRTRIRLRVDGELIEQMKVKPAAHNSLITRIKILGGMN 243 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL---PSHCPQLEQLGAP-- 109 + +G+ + N +R S +G +RLL ++ LG Sbjct: 244 IAEKRIPLDGRFGMTID-GVNLDVRVSTIPTVYGEKCVIRLLSTADEKTRKITDLGMTLY 302 Query: 110 --TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + ++++ +G++LVTG TGSGKSTTL A +G L + +I+T+EDP E Sbjct: 303 NYEMFKQIIRCPHGVMLVTGPTGSGKSTTLYATLGEL-SKPNVNIVTVEDPCEKKIDGVN 361 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFA+ LR+ LR+DPD++++GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 362 QVQINAKAGL---TFAAALRSILRQDPDIVMVGEIRDGETADIAIRAAITGHLVLSTLHT 418 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 AA + RLVD +A SL V++Q+L Sbjct: 419 NDAASTILRLVDMGV------APYMVASSLVGVIAQRLVKLLCPECKEKVMLTDPADLRL 472 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR A+ E+++++ + LI G T + + Sbjct: 473 VGKTEPVEICKAHYGGCRSCHNTGYKGRTAIHEIIVSSNDIKELISSGATAE--QIGAQA 530 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ G + + V G Sbjct: 531 EKNGTKLLRSNVTDMVLAG 549 >UniRef50_A9BA92 Tfp pilus assembly protein, pilus retraction ATPase PilT n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BA92_PROM4 Length = 347 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 141/325 (43%), Positives = 198/325 (60%), Gaps = 3/325 (0%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRGRME--AAPFDTPDVEELLREWLDDDQRAILLE 62 EIV+ ++K SD+HL P R+ ++ + D++ L+ E L ++ E Sbjct: 6 EIVSYAMKAGSSDIHLEEGSPIAVRVNSDIKISGQKLRSQDMDNLMMELLGKEKVNEFNE 65 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 G LD + S+ RLR +A+ L LRLLP + P+ + LG P +L K E G+ Sbjct: 66 LGDLDSSTSIEGLSRLRINAYIANEKRCLTLRLLPDNLPKWQDLGLPEPFIKLSKLERGM 125 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYAS-QRCLIQQREIGLHCMT 181 +L TG TGSGKSTTLAA + + + HILT+EDP+E+++ + +I QRE+ + Sbjct: 126 VLCTGPTGSGKSTTLAAFINCILETQKRHILTIEDPIEFIFEHTENSIIHQREVKRDTDS 185 Query: 182 FASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSF 241 FA L+AALREDPDVI +GE+RD ETI+LA+TAAETGHLVL TLHT AA+ VER+VD F Sbjct: 186 FARALKAALREDPDVIYIGEMRDLETIQLAITAAETGHLVLGTLHTSSAAKTVERIVDVF 245 Query: 242 PAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 P +++ R Q++ SL ++SQ L + R +ELLINTPA+GNLIRE K Q+ Sbjct: 246 PGDQQEQARLQVSTSLAGIMSQTLCKNTLGKRSLAYELLINTPAIGNLIRERKVSQIYSQ 305 Query: 302 IQTGQQVGMITFQQSYQHRVGEGRL 326 +QTG GM T +Q V +G + Sbjct: 306 LQTGSNDGMNTLEQCLNDLVAQGLI 330 >UniRef50_Q1AWU6 Type II secretion system protein E n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AWU6_RUBXD Length = 572 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 102/381 (26%), Positives = 160/381 (41%), Gaps = 72/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++ SD+HL R R+ G + ++ + L D Sbjct: 193 VSSILQQAISDGASDIHLEPRPGRLAVRVRVDGLLREVMSIPHRLQSGVISRLKLVSGLD 252 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVL 112 L ++G+ + + R ++ HG + LRLL + +L +LG L Sbjct: 253 IAERRLPQDGRFSVRIGQ-QKVDFRVASLPTVHGEKVVLRLLDNSHAAARLPELGLSPEL 311 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + G ILVTG TGSGKSTTL A + LN +I+T+EDPVEY Sbjct: 312 HRRYESVFRRPYGAILVTGPTGSGKSTTLYATLAELN-DPRKNIITVEDPVEYRIEGINQ 370 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL +FAS LR+ LR DPDV+++GE+RD ET ++A+ +A TGHLVLATLHT Sbjct: 371 IQVNPRIGL---SFASALRSILRSDPDVVMIGEIRDHETAKIAVESALTGHLVLATLHTS 427 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RL D A ++ V++Q+L Sbjct: 428 DAPGALTRLTDMGVE------PFLTASAVDCVVAQRLARRLCERCRRPAEVERGLLEGIG 481 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GR+ ++EL++ AVG L+ + + + Sbjct: 482 FPFQLISEEEASFHRAVGCEWCGGTGYRGRIGVYELMMVDEAVGELVLRRAST--AEIAR 539 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 + GM+ ++ + G Sbjct: 540 AAEAGGMVRLREDALLKAARG 560 >UniRef50_A6DTL1 Twitching motility protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTL1_9BACT Length = 361 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 119/330 (36%), Positives = 185/330 (56%), Gaps = 5/330 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPF----DTPDVEELLREWLDDDQR 57 + I+ V+ SD H+ P R+ G + D + + E Sbjct: 5 KLNSILVTGVQEGASDWHIREGSPVALRVHGGLYEISDGFVPDYDFLSSAIVEIAGQKVL 64 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 + LE G DFA R R + QR +S+ R + S P LE LG P ++ ++ + Sbjct: 65 DLYLETGDADFAFDEDNAGRFRANIHRQRGLLSMTFRHVKSDVPPLEALGLPEIILKIAE 124 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 E G+ILVTG TGSGKSTT+A M+ ++N + + HI+T+EDP+EY + + + +QRE+G+ Sbjct: 125 YERGIILVTGTTGSGKSTTMACMLEHMNTNMNRHIITVEDPIEYNFKDKNSIFEQREVGI 184 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 ++F + L+ ALR+DPDVI++GE+RD +I AL AA+TGH+V++TLHT A Q++ RL Sbjct: 185 DTVSFGAALKYALRQDPDVIVVGEMRDVTSIESALHAADTGHMVISTLHTANAGQSITRL 244 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKTH 296 +D+FPA ++ +R LA ++ A++ Q+L G V E++INT + LI + K Sbjct: 245 LDTFPATAREALRKSLAENVAAIVCQRLVPRASGRGMVPCNEVMINTAFIKKLILDDKVD 304 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 Q+ I G + GM TF Q V G + Sbjct: 305 QISGAIAKGSEYGMFTFDQRLLQLVNAGDI 334 >UniRef50_Q47FA9 Pilus retraction protein PilT n=7 Tax=Betaproteobacteria RepID=Q47FA9_DECAR Length = 395 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 183/329 (55%), Gaps = 3/329 (0%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQR 57 M ++++ L + SD+ + + P +I+G + +E++ E + DQ Sbjct: 1 MILDKLFQLMAEKQASDIFISAGAPIHIKIQGNTIPVNQQVMLPDMIEKIAYELMSPDQI 60 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLK 117 +++ + + R + F QR S+ +R + + P +++LG P +L EL+ Sbjct: 61 KTFEATMEMNLSFGVPNVGNFRVNIFRQRGSTSIVIRFILGNIPAMDELGLPNILGELIM 120 Query: 118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGL 177 + GLIL+ GATGSGKSTTLA+M+ + N + HILT+EDP+E+L+ ++ ++ QREIG+ Sbjct: 121 EKRGLILIVGATGSGKSTTLASMLDHRNANRSGHILTVEDPIEFLFKHKKSIVNQREIGM 180 Query: 178 HCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERL 237 M + + L+ A+R+ PD IL+GE+RD ET++ A+ A+TGHL LATLH + A+ R+ Sbjct: 181 DTMDWQAALKNAMRQAPDCILIGEIRDKETMQAAIAYAQTGHLCLATLHANNSYHALNRI 240 Query: 238 VDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQ 297 + FP + + + L+ +LRA++SQ+L R+ E+++NT + LI G+ Sbjct: 241 ISFFPLENRPALFLDLSVALRAIISQRLVKKPDGKRIPTCEIMLNTRHISELIERGEVQG 300 Query: 298 LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + ++ G TF+Q + + Sbjct: 301 IKDAMEQTLAPGSQTFEQDLFNLYSSSTI 329 >UniRef50_B9Y801 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y801_9FIRM Length = 560 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 90/376 (23%), Positives = 165/376 (43%), Gaps = 66/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ + + SD+H+ R+R G + V + L + Sbjct: 185 VNNMIRQAYETGASDIHIEPFEMTTVIRFRTDGVLHEFTRIAKSVHDALITRIKIMGNMN 244 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP---SHCPQLEQLGAPTV 111 + ++G ++ + ++ +R S+ +G + +RLL L+ LG Sbjct: 245 IAEKRIPQDGHIESQID-GKSLDIRLSSLPTVYGEKMVIRLLGHSLQQLTTLKDLGLQQK 303 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + ++ G++L TG TGSGK+TTL A++ L + + +++T+EDPVE Sbjct: 304 DYDLMESMIHQPYGILLFTGPTGSGKTTTLYAILNELARE-EVNVITIEDPVEKRMMGVN 362 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFAS LR+ LR+DPD++++GE+RD ET +A+ +A TGH VL+T+HT Sbjct: 363 QVQVNAKAGL---TFASALRSILRQDPDIVMIGEIRDEETAEIAVRSAITGHYVLSTIHT 419 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 +A A+ RL D L+ S+ +++Q+L Sbjct: 420 NDSATAIARLKDMNVE------PYLLSSSVVGIVAQRLARQLCPHCKEQVMPTAEQSQLL 473 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR ALFE+L T + +LI ++ + ++ + G Sbjct: 474 GGYTGPIYKPHGCARCNQSGYKGRTALFEILPLTAEIRDLIVS--SNDTNKIKESAIKAG 531 Query: 310 MITFQQSYQHRVGEGR 325 M T + + +G+ Sbjct: 532 MTTLSEEMVKMIIKGQ 547 >UniRef50_C1TK45 Type II secretion system protein E (GspE) n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TK45_9BACT Length = 500 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 98/371 (26%), Positives = 159/371 (42%), Gaps = 62/371 (16%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + A ++K +D+H+ S R+R+ G + + L + D Sbjct: 129 VNGLFADAMKQRATDIHVESYEDSVIIRFRVDGVLRDRLKLPRSHQAPLVSRIKVMARMD 188 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 + ++G++ V +R ++ +HG +ALRLL L LG Sbjct: 189 IAEHMAPQDGRIGITVG-GRAVDVRVNSVPTQHGERMALRLLDKGGGALTLRDLGMDERE 247 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 ++ ++ S G+IL TG TGSGKST+L A++ L + +++T+EDPVEY Sbjct: 248 LGLMERIISSPYGMILFTGPTGSGKSTSLYAILQELAK-PSVNVITVEDPVEYDLPGVAQ 306 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + G MTFAS LR+ LR+DPD++++GE+RD +T + + A+ TGHLVL+TLHT Sbjct: 307 IQVNEKAG---MTFASALRSILRQDPDIVMIGEMRDFDTAHIGVQASLTGHLVLSTLHTN 363 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + AV RL D +AGSL V++Q+L Sbjct: 364 DSISAVARLADMGVE------PYLVAGSLVGVVAQRLVRRLCPHCRQEVPVPSILAKNGV 417 Query: 269 ---------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITF 313 GRV ++E LI + I + + G T Sbjct: 418 KKAWGPTGCPDCSGTGYRGRVGIYEQLIIDDDLREAIARNAPA--AEMRALAEPQGFRTL 475 Query: 314 QQSYQHRVGEG 324 + V +G Sbjct: 476 WEIGLSLVEKG 486 >UniRef50_B1YJT8 Type II secretion system protein E n=5 Tax=Bacillales RepID=B1YJT8_EXIS2 Length = 554 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 97/378 (25%), Positives = 166/378 (43%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHL---CSAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +I+ + SD+H+ ++ R RI G + ++ +L + D Sbjct: 177 VNQILENGISQRASDIHMDPQETSLSIRIRIDGELRTENNYPKQIQNILTTRIKVMSELD 236 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPT-- 110 + L ++G++ F + R S +G + +R+L S + ++G Sbjct: 237 ITESRLPQDGRIKF-LHNGVAYDFRVSTLPTVYGEKVVIRILDSSNSNISIAKIGFSERN 295 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E+LK NG+IL+TG TGSGKS+TL A + LN +I+T+EDPVEY Sbjct: 296 EQQFREMLKRPNGIILITGPTGSGKSSTLYAALNELNDE-TRNIITVEDPVEYQVDGINQ 354 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL TFASGLR+ LR+DP+V+++GE+RD ET +++ A+ TGHLVL+TLHT Sbjct: 355 VQVNSKIGL---TFASGLRSILRQDPNVVMVGEIRDIETAEISIRASLTGHLVLSTLHTN 411 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RL+D +A S+ +++Q+L Sbjct: 412 SAVSSITRLIDMGVE------PFLVAASVTGLIAQRLVRRVCRDCGEVQPLSKREEELFA 465 Query: 269 ---------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR+A+ E+++ ++ +I T + + Sbjct: 466 QEGIAATTVMRGRGCSSCNMTGYRGRLAIQEVVMVDESLRRMIMNQSTE--SEITMYVRS 523 Query: 308 VGMITFQQSYQHRVGEGR 325 G +V +G Sbjct: 524 QGQRLLLADGLSKVAQGI 541 >UniRef50_D2DXQ5 Twitching motility protein n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXQ5_9BACT Length = 371 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 117/328 (35%), Positives = 187/328 (57%), Gaps = 4/328 (1%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRA 58 I+ +V+ SD+HL P RI G + TP + +LR + Sbjct: 10 TFRAILRAAVQSEASDIHLKPGSPPVVRIDGELVPVEAPTPTDAWLRVVLRSIIPQHLTT 69 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 + + DFA + ++ R R + F QR ++A+RL+ + L P + +L Sbjct: 70 QFEQAHEADFAFTY-QDLRFRVNIFQQRGHPTVAMRLVKQLMRNFDDLNLPPQIADLASK 128 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 + G++++ GATGSGKSTTLAAMV ++N HI+T+EDP+E+L+ + +I+QREIG+ Sbjct: 129 QRGIVIIGGATGSGKSTTLAAMVEHVNTSVRKHIVTIEDPIEFLFTDKESIIEQREIGID 188 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 T++SGLR LR+DPDVI++GE+RD+E+ A++AA G LV TLHT Q+V+R++ Sbjct: 189 TATYSSGLRHVLRQDPDVIVIGEMRDAESAHAAMSAANIGRLVFTTLHTADTIQSVQRVL 248 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 + FP+ E+D R A +L V+ Q+L +Q G + E+L+N+P++ +I E ++ Sbjct: 249 EFFPSSERDFARRLFAETLTGVVCQRLVRSEQSGTIPAAEVLLNSPSIARMIAEEHLDKI 308 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ G GM TF Q V EGR+ Sbjct: 309 RGALELGGPDGMQTFDQHLNELVREGRI 336 >UniRef50_A8PPD5 Type IV pilus assembly protein TapB n=1 Tax=Rickettsiella grylli RepID=A8PPD5_9COXI Length = 586 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 96/378 (25%), Positives = 167/378 (44%), Gaps = 66/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +++ N SD+HL R+RI G + ++ + L D Sbjct: 210 VYQLLLDAIRKNASDVHLEPLQGRLTIRFRIDGLLYSSAILPKPFMSRVITRLKIMAQLD 269 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 + ++G+ + R S HG L +R+L S+ ++++LG Sbjct: 270 IAERRIPQDGRFQVKDKFDRDVDCRLSTCPTIHGEKLVIRILDSNQMLLKIDKLGMNEKQ 329 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 LKS +G+ILVTG TGSGK+ TL + +L +H+ +I T+E+P+E + Sbjct: 330 KNEFITALKSPHGMILVTGPTGSGKTITLYTALNFL-KHSTVNISTVENPIEIILPGINQ 388 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + I L TFA LRA LR+DPD+I++GE+RD ET + + AA+TGHLVL+TLHT Sbjct: 389 VNINPAIHL---TFACVLRAFLRQDPDIIMVGEMRDQETAEIGIKAAQTGHLVLSTLHTN 445 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A +++ RL + + S+ +++Q+L Sbjct: 446 SAIESLIRLENMNIPT------YNIVASVNLIIAQRLVRRLCDRCKIETPLPKEFIRKLN 499 Query: 269 --------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQV 308 +GR +FE+L T + I K + + + + ++ Sbjct: 500 LITNSKIKTFAAKGCDHCTEGYKGRTGIFEILTLTEKIKKGIL--KKNSMLEIKKMAEKQ 557 Query: 309 GMITFQQSYQHRVGEGRL 326 GM T S ++ +G + Sbjct: 558 GMQTLYSSALEKLKQGVI 575 >UniRef50_Q15ZI3 Type II secretion system protein E n=119 Tax=Proteobacteria RepID=Q15ZI3_PSEA6 Length = 637 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 164/380 (43%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ I +++ SD+H+ R R+ G ++ ++ L L D Sbjct: 184 LQSIFEDALQTKASDIHIEPDSEMLRIRLRVDGVLQENIIKEKNIASALVLRLKLMSGLD 243 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVL 112 L ++G+ + + + +R S ++G S+ +RLL LEQ G P L Sbjct: 244 ISEKRLPQDGRTNMRIK-GHSIDVRVSTMPVQNGESVVMRLLDQSAGVLSLEQTGMPAAL 302 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + LL+ +G+ILVTG TGSGK+TTL + LNQ A I+T+EDPVEY Sbjct: 303 LKRFRVLLRRPHGMILVTGPTGSGKTTTLYGALSELNQ-PSAKIITVEDPVEYRLPRINQ 361 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL+ F++ LR LR+DPD+I++GE+RD ET + L A TGHLVL+TLHT Sbjct: 362 VQTNSKIGLN---FSNVLRTTLRQDPDIIMVGEMRDQETAEIGLRGALTGHLVLSTLHTN 418 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RL+D +A SLRAV++Q+L Sbjct: 419 DAISSAVRLLDMGAPG------YLVASSLRAVIAQRLVRKVCESCSEAYQPTREESLWLK 472 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GRV +FELL T ++ N ++ + Q Sbjct: 473 SIDSQVVNVTFRRGRGCQTCNNTGYRGRVGVFELLEMTESMMNALKTNDSVQFGQA--AL 530 Query: 306 QQVGMITFQQSYQHRVGEGR 325 G + + G Sbjct: 531 HSPGFVPLAKVALTYAKMGI 550 >UniRef50_A0LPI4 Type II secretion system protein E (GspE) n=2 Tax=Deltaproteobacteria RepID=A0LPI4_SYNFM Length = 566 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 102/381 (26%), Positives = 156/381 (40%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ ++ SD+H R R+ G + ++ + L + Sbjct: 186 VNVLISRALDMRASDIHFEPFERSFQVRCRVDGVLFDLDQPQKSMQAAIVSRLKLMANLN 245 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV- 111 L ++G++ +R S +G S+ LRLL L LG Sbjct: 246 IAERRLPQDGKIKLKFG-NREVDIRVSTVPTIYGESIVLRLLAQEGVEYNLANLGMDGED 304 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L +L++ G+ILVTG TGSGK+TTL ++ LN I+T+EDPVEY Sbjct: 305 LAYLEQLVERPFGMILVTGPTGSGKTTTLYGVLKKLNSVV-RKIITVEDPVEYQINGINQ 363 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +I L TFA+ LR+ +R+DPDV+L+GE+RD ET +A+ +A TGHLVL+TLHT Sbjct: 364 IQVKPQINL---TFANALRSLVRQDPDVLLIGEIRDKETADIAIESALTGHLVLSTLHTN 420 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL D +A SL VL+Q+L Sbjct: 421 DAPGAITRLRDIGIES------FLMADSLLTVLAQRLVRVLCPHCKEPYTAREADWNRLN 474 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR +FE+L +V + I GK + Sbjct: 475 EIIPDLPRSLTLCQNKGCDRCGYTGFRGRQGIFEVLKVNESVRSAIVAGKDAG--SIAPI 532 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 + G +V EG Sbjct: 533 AFESGYRPLLHHGYRKVIEGI 553 >UniRef50_D0LLW4 General secretory pathway protein E n=2 Tax=Nannocystineae RepID=D0LLW4_HALO1 Length = 610 Score = 375 bits (965), Expect = e-103, Method: Composition-based stats. Identities = 97/396 (24%), Positives = 165/396 (41%), Gaps = 86/396 (21%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + ++ ++K SD+H+ R+R+ G + + + Sbjct: 213 VNSLLFHAIKERASDIHIEPGEKEVMVRYRVDGVLREHKRAHRQYLPSIIARVKIMAGLN 272 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 L ++G++ V+ ++ +R + G + +RLL L +G T Sbjct: 273 IAEKRLPQDGRIRRRVA-GKDIDMRVATVPTAAGERVTIRLLDRTSVLLGLPDIGMATDT 331 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++++ +G++LVTG TGSGK+TTL A + +N + +ILT+EDPVEY Sbjct: 332 LGLVRQIIERPHGILLVTGPTGSGKTTTLYACLSEINS-PELNILTVEDPVEYQLEGISQ 390 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 +I L TFASGLR+ LR DPDVI++GE+RD ET +A+TA+ TGH V +T+HT Sbjct: 391 TQVNAKIDL---TFASGLRSFLRHDPDVIMVGEIRDRETAEIAITASLTGHFVFSTVHTN 447 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQK------------------LEVD-- 268 AA A+ RLVD +A S+ +L+Q+ L + Sbjct: 448 DAAGAITRLVDMGIE------PFLVASSMVGLLAQRLVRRPCFECATEVTPSEELVRELG 501 Query: 269 ---------------------------------------KQEGRVALFELLINTPAVGNL 289 GR A++E+L+ + + L Sbjct: 502 LDPERFFAGTYELPAVKGQRPVTPGKVLEARGCPSCLNVGYSGRTAVYEMLMISERIRQL 561 Query: 290 IREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 + + G G++T + +V +G Sbjct: 562 TLQKADAG--SIRNAGLDEGLVTLRMDGARKVMQGL 595 >UniRef50_A4XWG4 General secretory pathway protein E n=4 Tax=Bacteria RepID=A4XWG4_PSEMY Length = 495 Score = 375 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 106/378 (28%), Positives = 168/378 (44%), Gaps = 69/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++K N SD+HL + R+R+ G + ++ LL + D Sbjct: 119 INAILGEAIKENASDIHLETFEKRLVVRFRVDGILREVLEPKRELAALLVSRVKVMARLD 178 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 + ++G++ V +R S +G + LRLL L+ LG Sbjct: 179 IAEKRVPQDGRISLKVG-GREVDIRVSTLPSANGERVVLRLLDKQAGRLSLQHLGMRAED 237 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + E ++ +G++LVTG TGSGK+TTL A + LN H +ILT+EDP+EY Sbjct: 238 RALMEETVRKPHGILLVTGPTGSGKTTTLYASLVSLNDH-TRNILTVEDPIEYHLEGIGQ 296 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 ++ MTFA GLRA LR+DPDV+++GE+RD ET +A+ A+ TGHLVL+TLHT Sbjct: 297 TQVNAKVD---MTFARGLRAILRQDPDVVMVGEIRDKETAEIAVQASLTGHLVLSTLHTN 353 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RLVD L+ SL VL+Q+L Sbjct: 354 SAIGAITRLVDMGVE------PFLLSSSLLGVLAQRLVRVLCPACKEPYPADAAECTLLG 407 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR ++EL++ + L+ + Q + + + Sbjct: 408 VPASPPPTLYHARGCAQCHQQGYRGRTGIYELVVFDETMRTLVHSRASEQ--DMTRHART 465 Query: 308 VGMITFQQSYQHRVGEGR 325 +G + + + +V EG Sbjct: 466 LG-PSIRDDGRRKVLEGV 482 >UniRef50_A7IH58 Type II secretion system protein E n=10 Tax=Rhizobiales RepID=A7IH58_XANP2 Length = 606 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 107/382 (28%), Positives = 165/382 (43%), Gaps = 72/382 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +++ SD+H+ R RI G + P + + + + D Sbjct: 225 VNDLLEKAMELRASDIHIGPFRGTIEVRMRIDGLLRVVPAPADVLPQAVISRIKILAGLD 284 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 L ++G + +E +R + +HG + +RLLP +++LG Sbjct: 285 IAERRLPQDGAARLKLGRSE-IDVRVALMPTQHGEAAVIRLLPRDRGLLNMDKLGLSPGD 343 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L LL +G+++VTG TGSGK+TTLA ++ LN+ ILT+EDPVEY Sbjct: 344 ADILKRLLALPHGMVVVTGPTGSGKTTTLATILSILNE-PTRKILTIEDPVEYEIKGVYQ 402 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + IGL TFA+ LR+ LR DPDVI++GE+RD ET +A+ AA TGHLVL TLHT Sbjct: 403 SQVKPAIGL---TFAAALRSFLRHDPDVIMVGEVRDPETAHIAVHAALTGHLVLTTLHTD 459 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA +V RL+D L +LRAV++Q+L Sbjct: 460 TAAASVPRLLDLGVEG------FLLKSTLRAVIAQRLVRQLCDRCKRPRTLTATDVADDP 513 Query: 268 ------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 GRV +FE+L + + +I + V + Sbjct: 514 RFSALGFAAGETVYEPKGCERCGGAGYRGRVGVFEILTLSDEIREMI--DRHAGASAVDK 571 Query: 304 TGQQVGMITFQQSYQHRVGEGR 325 GM T + G Sbjct: 572 AAIAGGMTTMLDDGILKCRAGI 593 >UniRef50_Q97HA7 General secretion pathway protein E, ATPase n=1 Tax=Clostridium acetobutylicum RepID=Q97HA7_CLOAB Length = 491 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 99/375 (26%), Positives = 164/375 (43%), Gaps = 68/375 (18%) Query: 1 MNMEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLDDDQR 57 + ++ I+ L++ N SD+H+ R RI G ++ E + + Sbjct: 120 LLVDSIIDLALSKNGSDIHIEPFKDIAVVRIRIDGVLKKVMELPLKAYESVCIRIKIMAD 179 Query: 58 -----AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQL-GAP 109 ++G++ + +N R S+ G + +R+L + + G Sbjct: 180 MNIVIKKAPQDGRMYY-----KNCDFRVSSIPTIFGEKIVIRVLYKNNAALSFSDITGVN 234 Query: 110 T-VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + LL+ NG++L+TG TGSGKSTTL + + LN + +I+T+EDPVE + Sbjct: 235 ENEVAGLLEKPNGIVLLTGPTGSGKSTTLYSAISKLNSE-EKNIVTIEDPVEMIIEGINQ 293 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + E G+ TF+SGL+ LR+DPD+I++GE+RD T +A+ AA TGHLVL+TLHT Sbjct: 294 INVNYEAGI---TFSSGLKNILRQDPDIIMVGEIRDETTAEIAVRAAITGHLVLSTLHTN 350 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RL D + + +L V++Q+L Sbjct: 351 DAFSAINRLCDMGIQ------KYLILDALNGVIAQRLLRTICVHCKEEYKPNDYERKVLG 404 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR A+FE++ V ++I E K + + Q G Sbjct: 405 LNSSEVLYKGRGCSKCDFSGYHGRKAVFEIISINDDVRDIIAESKGADC--IKRYFIQSG 462 Query: 310 MITFQQSYQHRVGEG 324 + T ++S V G Sbjct: 463 VKTLKKSGMELVKRG 477 >UniRef50_C7QZF3 Twitching motility protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7QZF3_JONDD Length = 432 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 131/326 (40%), Positives = 183/326 (56%), Gaps = 5/326 (1%) Query: 6 IVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTP---DVEELLREWLDDDQRAILLE 62 ++ V SDLH+ + R R+ GR+ D +L E L + L Sbjct: 81 LLHALVSTGGSDLHIKAGSVPRVRVDGRLRRLQVPDLTDGDTARMLEEVLPEQLHQEFLT 140 Query: 63 NGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 N + DFA L R R +A+ R + + R + H L +LG P V+ EL GL Sbjct: 141 NHETDFAYYLQGVGRFRVNAYRARGMVGIVFRRVAEHAMSLHELGLPEVVGELALEPRGL 200 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LVTG TGSGKSTTLA+MV +N + +I+T+EDP+E L++ ++ ++ QRE+ F Sbjct: 201 VLVTGPTGSGKSTTLASMVDLINTLREVNIVTIEDPIEVLHSDKKAIVSQREVRFDTADF 260 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 S LRAA+R+DPDVIL+GE+RD+ET+R AL A ETGHLVL+TLHT A + V R+VD FP Sbjct: 261 NSALRAAMRQDPDVILVGEMRDAETVRAALQAGETGHLVLSTLHTIDAEETVNRIVDFFP 320 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQ-EGRVALFELLINTPAVGNLIRE-GKTHQLPH 300 + E+ VR LA SLR ++SQ+L EGR + E++INT I T L Sbjct: 321 SHEQMQVRMALAQSLRGIVSQRLVRRADNEGRHVVAEVMINTGRTAEAIIAPSTTASLTD 380 Query: 301 VIQTGQQVGMITFQQSYQHRVGEGRL 326 +I G+ M TF Q V +G + Sbjct: 381 LIADGEYYNMQTFDQHLFGLVRDGVV 406 >UniRef50_A4J3A4 Type II secretion system protein E n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3A4_DESRM Length = 554 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 97/381 (25%), Positives = 159/381 (41%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + +I+ ++ SD+H+ R+RI G + P +++ + + Sbjct: 172 VYQIIDRAIDQGASDIHIEPQEKRVRIRYRIDGMLILGMELAPTLDKAIISRIKIMSQLN 231 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP---QLEQLGAP-- 109 + ++G++ + + N LR S +G +R+L QL QLG Sbjct: 232 IAEKRVPQDGRIQYG-KQSRNFDLRVSTMPTVYGEKAVIRILNPESIKKYQLAQLGFSAY 290 Query: 110 --TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + L++ +G++L+TG TG GK+TTL A++ LN D + T+EDPVEY Sbjct: 291 NLKSFQKCLRATSGMVLITGPTGCGKTTTLYAILNELNLE-DRNFSTIEDPVEYRLEGIN 349 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + G MTFA GLRA LR+DPD+I++GE+RD ET +A+TAA TGHLV +TLHT Sbjct: 350 QTQVNTKTG---MTFAVGLRALLRQDPDIIMVGEIRDRETAEIAVTAAGTGHLVFSTLHT 406 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A A++RL+ + + + Q+L Sbjct: 407 NDALGALDRLIHMGLEIFQVASSVLVVVA------QRLVRKLCPYCKEGYLVETKSPEYA 460 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR+A+ E+L + L+ E + + Sbjct: 461 FLQSTPWQDHIFYKAKGCVHCNFIGYRGRMAIQEVLQVNGNIRKLLVERAPSG--ELKKA 518 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 Q GM T + + +G Sbjct: 519 ALQGGMTTLKTDGIEKALQGL 539 >UniRef50_Q2SZG5 Type II/IV secretion system protein n=29 Tax=Burkholderiaceae RepID=Q2SZG5_BURTA Length = 423 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 99/380 (26%), Positives = 161/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ + + + SD+H+ W R RI G + + + + D Sbjct: 42 VADMLRAAHERDASDIHVEPCESGWRVRLRIDGVLHEFARPPAHLRDACVTRIKVLARMD 101 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPTV- 111 + ++G+L A++ R S+ HG L LR L + L LG Sbjct: 102 IAERRVPQDGRLRLALAPGRAGDYRVSSLPTLHGEKLVLRRLETLPADLSLAALGFDAAQ 161 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + + +GL+LVTG TGSGK+ +L + LN ++ T+EDP E Sbjct: 162 ASGVEAAIGAPHGLVLVTGPTGSGKTLSLYCFLQMLN-DVSRNVCTVEDPAEIELDGINQ 220 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + + GL TFA LRA LR+DPDVI++GE+RD++T +AL AA+TGHLVL+TLHT Sbjct: 221 VGVREKAGL---TFAVALRAFLRQDPDVIMVGEIRDAQTADVALKAAQTGHLVLSTLHTN 277 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL+D LA +LR V +Q+L Sbjct: 278 DAPAAVARLLDIGV------APYNLAAALRLVTAQRLVRRLCPACRAPSDTSPAALRAAG 331 Query: 269 ------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 GR+ + +++ + + NLI + + + Sbjct: 332 LAAAPIDAGWRPYAATGCPACHGIGYRGRIGIHQVMPLSAELRNLIAACASS--AELARQ 389 Query: 305 GQQVGMITFQQSYQHRVGEG 324 GM + + + RV +G Sbjct: 390 ACAEGMTSLRDAALARVRDG 409 >UniRef50_B5JLH9 Type II/IV secretion system protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLH9_9BACT Length = 570 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 102/385 (26%), Positives = 166/385 (43%), Gaps = 77/385 (20%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDT--PDVEELLREWLDD--- 54 + E+ ++ +D+H R+RI G + P ++ + L Sbjct: 181 VNEVFNQAISGGATDIHFEPMEDYLRIRYRIDGLLVPVPVPENLRRFQDAIVSRLKIMAK 240 Query: 55 --DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT 110 L ++G+++ V +R S +G S++LRLL L QLG Sbjct: 241 LNISERRLPQDGRINHKVGST-TLDIRLSTMPVMYGESISLRLLNKKDKPLSLAQLGMSE 299 Query: 111 ----VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 V+ +L +G+ILVTG TGSGKST+L A + +N D I+T+EDP+EY A Sbjct: 300 RDTSVVNRVLNLPHGIILVTGPTGSGKSTSLNAFIRSINSD-DRRIITVEDPIEYEVAGV 358 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + +IG FA LR LR+DP+VI++GE+RD ET +A+ A+ TGHLV +TLH Sbjct: 359 NQIQVKPDIGF---GFAEALRHVLRQDPNVIMVGEIRDRETADIAVQASLTGHLVFSTLH 415 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T +A A+ RL+D +A S+ V++Q+L Sbjct: 416 TNDSAGAITRLIDMGVE------PFLIASSVEMVIAQRLLRRACPSCMGMRSAEPMEIED 469 Query: 269 ------------------------------KQEGRVALFELLINTPAVGNLIREGKTHQL 298 +GR+ ++E+L T + I + + Sbjct: 470 ALKVLDLSPSLASGVSELPESCGCETCRGIGYKGRIGIYEILRVTEKMHEPIVRREAAPV 529 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGE 323 + Q G + GM++ +S + V Sbjct: 530 --IRQLGLEAGMVSLGRSGWNLVDR 552 >UniRef50_C9XVR3 Protein transport protein hofB n=6 Tax=Enterobacteriaceae RepID=C9XVR3_CROTZ Length = 480 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 107/374 (28%), Positives = 153/374 (40%), Gaps = 64/374 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 +++ + +++ SD+H + R+RI G + A P + L L D Sbjct: 105 IDKTLQQALQRRASDIHFEPAEAHYQIRFRIDGVLHALPPLPARLASALTARLKVLGNLD 164 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 L ++GQ ++ R S R G + LRLL LE LG Sbjct: 165 IAERRLPQDGQFSIELA-GRTVSFRISTLLCRCGEKVVLRLLQQTEQPLEVQALGLSQAQ 223 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+ GLILVTG TGSGK+ TL + LN +I ++EDPVE Sbjct: 224 QTLFCQALQRPQGLILVTGPTGSGKTVTLYTALSALN-DPQVNICSVEDPVEIPVTGLNQ 282 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL TF + LRA LR+DPDVI++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 283 TPVLPKAGL---TFQAVLRALLRQDPDVIMIGEIRDLETAEIAVKAAQTGHLVLSTLHTN 339 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + + RL R LA +L V++Q+L Sbjct: 340 STTETLVRLEQMGLP------RWMLASALELVVAQRLVRKLCPYCRVFSQEPVTLPASLW 393 Query: 269 -----------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMI 311 GR+ALFELL A+ I G + + G+ Sbjct: 394 PRPIHPYKACGCERCYGGYYGRIALFELLSINAALRQTIASGAPP--AEIASQARAQGIT 451 Query: 312 TFQQSYQHRVGEGR 325 T + V G Sbjct: 452 TLFEHGLQAVEAGL 465 >UniRef50_B2A563 Type II secretion system protein E n=5 Tax=cellular organisms RepID=B2A563_NATTJ Length = 561 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 158/349 (45%), Gaps = 69/349 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ L++ SD+H R+R+ G M +ELL + D Sbjct: 174 IDTVIKLAIDQEASDIHFEPTSSDMLVRFRVDGMMRQITCFPKHTQELLISRIKIMTNMD 233 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPT-- 110 L ++G+ +F S +N LR SA G + +RLL L++LG Sbjct: 234 ITVKRLPQDGRCEFT-SQEQNIDLRASALPTIFGEKIVIRLLYKEKIIFPLDKLGFKDKE 292 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L +G+ILVTG TG GK+TTL + + ++N + +I+T+EDPVEY Sbjct: 293 LSQYKAMLADSSGMILVTGPTGCGKTTTLYSSLSWINS-PEKNIITVEDPVEYQLPGVNQ 351 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + GL TFA GLR+ LR+DPD+I++GE+RD ET R+A+ ++ TGHLV +TLHT Sbjct: 352 VEMNEKAGL---TFAIGLRSILRQDPDIIMIGEIRDLETARIAVRSSLTGHLVFSTLHTS 408 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + A+ RL+D L S++ +LSQ+L Sbjct: 409 NSIGALSRLIDMGIPM------YLLNSSIKGILSQRLVRKICNHCKELYQPSFQELNFYE 462 Query: 268 -----------------------DKQEGRVALFELLINTPAVGNLIREG 293 +GR A+FELL+ + I +G Sbjct: 463 AHANHISYLPNFFRGRGCRICNGTGYQGRKAVFELLVVDNQIKKEIAKG 511 >UniRef50_Q0AKY1 Type II secretion system protein E n=2 Tax=Proteobacteria RepID=Q0AKY1_MARMM Length = 548 Score = 373 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 108/353 (30%), Positives = 153/353 (43%), Gaps = 43/353 (12%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ +VA + SD+H+ R R+ G ++ + + D Sbjct: 186 LDNLVARATDARASDIHVELQHREAQIRLRVDGVLKDHIAWPTAQALAVISRVKVLAELD 245 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTVL 112 ++G+ V+ +R S ++G SL LRLL +E LG + Sbjct: 246 IAERRRPQDGRFSMPVA-GRTIDVRVSVVPGQYGESLVLRLLDPEASLRGIESLGLSQSV 304 Query: 113 PE----LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E +L +GLILVTG TGSGK+T+L A + L + ILT+EDP+EY A Sbjct: 305 SEPVEAMLNMPHGLILVTGPTGSGKTTSLYAFLRRLAS-GERKILTIEDPIEYRLAGVAQ 363 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 I L TFA+ LRA LR DPDVI++GE+RD+ET R A+ AA TGHLVL+TLHT Sbjct: 364 SQTNPAIDL---TFANALRAFLRHDPDVIMVGEIRDAETARTAIQAAMTGHLVLSTLHTN 420 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD----------------KQEG 272 A A+ RL D LA +L V+ Q+L G Sbjct: 421 DAPSAISRLQDMGIED------FLLAATLVGVVGQRLVRRTCPTCEGAGCQRCEESGFRG 474 Query: 273 RVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 R+ + E A+ IREG + ++ G T Q G Sbjct: 475 RLPVAEAFRVNEAIRASIREGARE--TGLEPVLKRAGYQTMWQDGLALCKRGL 525 >UniRef50_C4SWB4 Type II secretion system protein n=9 Tax=Enterobacteriaceae RepID=C4SWB4_YERIN Length = 512 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 101/373 (27%), Positives = 160/373 (42%), Gaps = 63/373 (16%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + L+++ SD+H + R+RI G + +P T ++ + L + Sbjct: 133 ITQTLRLAIQKRASDIHFEPYQHHYRIRFRIDGVLHESPAPTAELASRISSCLKVMAKLN 192 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP-SHCPQLEQLGA----P 109 L ++GQL ++ +R + + G + LR+L P L LG Sbjct: 193 IAEKRLPQDGQLALVLN-GTRYSIRIATLPVQFGEKVVLRILNIHQQPTLANLGLNTIAH 251 Query: 110 TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 L L + GL+LVTG TGSGK+ TL + LNQ +I ++EDP+E Sbjct: 252 QQLTRALSAPQGLVLVTGPTGSGKTVTLYCSLDQLNQ-PQRNICSVEDPIEIQADGINQT 310 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 IGL F+ LRA LR+DPDVI+LGE+RD+ET +A+ AA TGHLVL+TLHT Sbjct: 311 QTNNRIGLD---FSCVLRAMLRQDPDVIMLGEIRDNETAEIAVKAALTGHLVLSTLHTNS 367 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 ++ + RL R+ +A SL V++Q+L Sbjct: 368 TSETLIRLTQMGIE------RHLIASSLTLVIAQRLVRRLCLHCRQASPSLFQAPAGVWP 421 Query: 269 ----------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMIT 312 GR ++E+L TP + + + + + Q Q+ +T Sbjct: 422 SPLQHYLAVGCEHCCAGYYGRTGIYEMLSVTPQIQHALLSNVSP--AKLTQIAQKQEQVT 479 Query: 313 FQQSYQHRVGEGR 325 + V G Sbjct: 480 LLSAGLALVESGV 492 >UniRef50_B8FI02 Type II secretion system protein E n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI02_DESAA Length = 582 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 104/380 (27%), Positives = 162/380 (42%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ +V + +D+H+ +A R+RI G ++ + + L L D Sbjct: 204 VNIILYWAVDTDATDIHIEAAEKETLVRYRIDGMLQTRHRFPKKIHQPLISRLKVMADMD 263 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT-- 110 ++G + LR S+ ++G + +RLL + L +LG Sbjct: 264 IAIRRRPQDGAAKIRIK-GRKIDLRLSSLPSQYGEKMVIRLLGNSTKLLTLRELGMSPAM 322 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L L GLIL TG TGSGKSTTL A + + + ++T+EDP+EY Sbjct: 323 DEQLRTCLHKPQGLILTTGPTGSGKSTTLYASLKEVISE-EISVVTVEDPIEYEIPGANQ 381 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + G+ TFA+GLRA LR+DP+VI++GE+RD ET +A A+ TGHLVL+TLH Sbjct: 382 VQVNAKAGV---TFANGLRAILRQDPNVIMVGEIRDMETAEIAFRASLTGHLVLSTLHAN 438 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + AV RLVD +A S A L Q+L Sbjct: 439 SSISAVTRLVDM------QIKPYLIASSSLAFLGQRLLRRNCQACIEEYEPPAESLERLG 492 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+ +E+L+ + + LIR+ T Q +++ Sbjct: 493 ILAEKLAGIKYMHGAGCEKCHFSGYSGRIGTYEILMISEEIQELIRQDATEQ--KILKAA 550 Query: 306 QQVGMITFQQSYQHRVGEGR 325 GM+T ++ V G Sbjct: 551 TSAGMVTMEEYALEMVAMGI 570 >UniRef50_Q3SKS0 Pilus assembly pathway ATPase PilB n=3 Tax=Proteobacteria RepID=Q3SKS0_THIDA Length = 577 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 109/378 (28%), Positives = 161/378 (42%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ + +++ N SD+H+ R+RI G + + L L D Sbjct: 197 LQTLFEDALQVNASDVHIEPQEKQLMIRFRIDGVLHRQTEADLRIAPALALRLKIVSGLD 256 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPTV- 111 L ++G+ V +R S ++G S+ +RLL + P L+ LG P Sbjct: 257 ISEKRLPQDGRFAVKVR-GRTVDVRLSTMPTQYGESVVMRLLSQGDNAPTLDTLGMPPAM 315 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +L NGL+LVTG TGSGK+TTL A +G LN I+T+EDPVEY Sbjct: 316 LERFRAILHRPNGLVLVTGPTGSGKTTTLYAALGELN-DPGTKIITVEDPVEYRLPGVNQ 374 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +I L +FA LRA LR+DPDVIL+GE+RD ET ++AL AA TGHLVL+TLHT Sbjct: 375 VQANDKIDL---SFARVLRAMLRQDPDVILVGEMRDPETAQIALRAAMTGHLVLSTLHTN 431 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA RL+D +A S++ VL+Q+L Sbjct: 432 DAASTPVRLLDMGVPS------FMVATSVQGVLAQRLLRKVCEHCKAPHVPTPQERVWLG 485 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR A+ ELL + + + + + V+ + Sbjct: 486 AAYAEGDAYVAGRGCERCHGTGHAGRQAIHELLEISAPLADALARKPPAEF--VLAARAE 543 Query: 308 VGMITFQQSYQHRVGEGR 325 + T + G Sbjct: 544 LAGRTLRDQALALARSGV 561 >UniRef50_B4CW85 Twitching motility protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW85_9BACT Length = 365 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 127/330 (38%), Positives = 204/330 (61%), Gaps = 4/330 (1%) Query: 1 MNM-EEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA--PFDTPDVEELLREWL-DDDQ 56 M + I+ +V+ SD+HL P +RI G + P T + + + D Sbjct: 1 MEIFSRILQGAVQAGASDVHLKVESPVIFRITGDLVPVEAPLPTAEWFTGVLAKIVPDYL 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 R L ++ ++DFA SL R R + + QR G +ALR++ + E+L P V+P++ Sbjct: 61 RVRLEQDHEVDFAYSLPGVGRFRINVYQQRSGYVMALRVVKAKVRLFEELHLPPVIPKIA 120 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 ++ +G++L+TGATGSGKSTTLAAM+ ++N A HI+TLEDP+E+++ ++ +I+QRE+G Sbjct: 121 EATHGIVLITGATGSGKSTTLAAMIEHINITAKKHIITLEDPIEFIFEDKQSVIEQREVG 180 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 + TF +GL+ LR+DPDVI++GE+RDS ++ A++AA GHLV+ATLHT AA++++R Sbjct: 181 IDTGTFTTGLKNVLRQDPDVIVIGEMRDSSSVTAAISAANIGHLVVATLHTVDAAKSIQR 240 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTH 296 +++ FP +++P R QLA +L +V+ Q+L Q V E+L+NT AV LI G Sbjct: 241 ILEFFPGPDREPTRQQLATTLHSVVCQRLVRTPQNVIVPAVEVLLNTAAVAKLIHGGNLD 300 Query: 297 QLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ I+ G GM TF Q+ + G + Sbjct: 301 KIIGAIELGTGDGMQTFDQALYNMAKAGII 330 >UniRef50_Q39PZ3 Response regulator receiver domain protein (CheY-like) n=6 Tax=Deltaproteobacteria RepID=Q39PZ3_GEOMG Length = 823 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 69/376 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ +V++ SD+H+ R+RI G + D+ + + D Sbjct: 381 VNAVISEAVRYRASDIHIEPKTKCTVIRYRIDGLLHGKIRIPSDIHAAVVSRVKILAKMD 440 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLG-APTV 111 ++G++ + +R S +G + +R+L L++LG P Sbjct: 441 ISERRKPQDGRITVK-AGTRIVDMRVSTLPTMNGEKVVMRILDKSASIKGLDELGVLPDD 499 Query: 112 LPELL---KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +L K G+I+ TG TGSGK+T L +++ + + T+E+PVEY Sbjct: 500 MRKLTVLSKKPQGVIISTGPTGSGKTTMLYSLLSAMMDSH-KNFETIEEPVEYFLEEANQ 558 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL +FA LR+ LR+DPDVI++GE+RD ET +A A+ TGH+VL+TLHT Sbjct: 559 VAVREKIGL---SFAQVLRSTLRQDPDVIMVGEIRDQETADVAFKASLTGHMVLSTLHTN 615 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A ++ RL+D +A +L +++Q+L Sbjct: 616 SAVASITRLMDMGIK------PYIIASALEGIMAQRLVRRVCEACKTAVPPDRDLLELLR 669 Query: 269 ----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 GR+ +FEL + + I ++ + + + Sbjct: 670 VPADYLNGTVYQGKGCDKCNKTGYRGRIGVFELFVMNDDFRHFISS--HYRESELFEMAR 727 Query: 307 QVGMITFQQSYQHRVG 322 GM T + +V Sbjct: 728 ANGMKTLIEDGIEKVR 743 >UniRef50_D2RIL2 Type II secretion system protein E n=2 Tax=Acidaminococcus RepID=D2RIL2_ACIFE Length = 412 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 108/375 (28%), Positives = 162/375 (43%), Gaps = 68/375 (18%) Query: 5 EIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQ 56 E+V +++ SD+HL R R+ G ++ ++++ L D Sbjct: 39 EVVEQALEQGASDIHLEPETDGMVIRCRLDGVLQKLRTVPKNLQDPLVSRFKILSGMDIG 98 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP----T 110 L ++G+ A +R S+ HG SL LRLL L +LG Sbjct: 99 EKRLPQDGRFQEAWQ-DRQVDVRVSSLPTLHGESLVLRLLDQENVALDLSRLGFSHHNRA 157 Query: 111 VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 L L+ +GL LVTG TGSGKSTTL + L++ I+T+EDPVEY R + Sbjct: 158 RLDRCLQKPHGLFLVTGPTGSGKSTTLYGALAALDRDHQ-KIITVEDPVEYQLPGIRQVA 216 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 + +IGL TF+ LR+ LR+DPD IL+GE+RD ET +A+ AA TGH VL+TLHT A Sbjct: 217 VRPKIGL---TFSRCLRSILRQDPDCILIGEIRDGETAAMAIQAALTGHRVLSTLHTNTA 273 Query: 231 AQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD---------------------- 268 A AV R++D A +L+ V Q L Sbjct: 274 AGAVNRILDMGVE------PYLAASALQGVAGQLLVRRLCSHCKKAYTVQEQAWEWSYLG 327 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR+ L E+L+ +V I +G + + + ++ G Sbjct: 328 LQEPRTLYRAQGCPRCRHTGYGGRLPLQEVLLVEGSVRQGILDGWHEE--ALEKEARKTG 385 Query: 310 MITFQQSYQHRVGEG 324 + + + +V G Sbjct: 386 FRSLRDDGREKVLAG 400 >UniRef50_Q1J1R8 Tfp pilus assembly pathway, ATPase PilB n=7 Tax=Bacteria RepID=Q1J1R8_DEIGD Length = 891 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 97/381 (25%), Positives = 159/381 (41%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ + SD+H+ R+R+ G + P + + + D Sbjct: 512 VDNLIREAALQEASDIHIEPTESAVRVRYRVDGALREQPELPKGSAQSILARIKIMGGLD 571 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 + ++G++ F + + LR S +G +RLL + P++EQLG Sbjct: 572 IAERRVPQDGRIRFR-KGSIDLDLRLSTLPTVYGEKAVMRLLQKAENIPEVEQLGFSEHN 630 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E+++ NG+ L+TG TGSGKS T + + + + + + T+EDP+EY Sbjct: 631 FGRYLEVIEKPNGIFLITGPTGSGKSFTSFSTLKRIAR-PEKNTTTIEDPIEYEIPGIVQ 689 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 G MTFA LRA LR+DPD+I +GE+RD+ET ++A AA TGHLVLATLHT Sbjct: 690 SQVNVAAG---MTFARALRAFLRQDPDIIFVGEIRDTETAKIATEAALTGHLVLATLHTN 746 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RL + ++ S+ VL+Q+L Sbjct: 747 DAPGAITRLSEMGVEH------FNISASVVGVLAQRLVRRVCTECKQPTNADPEVLRRLG 800 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GR+ + EL++ + I G+T + Sbjct: 801 LSEAEVRGATLMRGSGCPRCGGTGYKGRMGIHELMVIDDPLRRAIAAGRTA--TELRDVA 858 Query: 306 QQV-GMITFQQSYQHRVGEGR 325 Q GM T +Q + G Sbjct: 859 MQESGMRTLRQDGIEKALAGL 879 >UniRef50_C7LVR8 Putative phytochrome sensor protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LVR8_DESBD Length = 770 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 97/391 (24%), Positives = 155/391 (39%), Gaps = 80/391 (20%) Query: 3 MEEIVALSVKHNVSDLHLCSAW-----PARWRIRGRMEAAPFDTPDVEELLREWLDD--- 54 + +I+ + K SD+H+ + R RI G + + + + Sbjct: 381 VNKIIMHAHKTGASDIHIEPSRTGRPGVVRMRIDGTCMRVLTVPESIIKPVVSRIKILSN 440 Query: 55 --DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS-HCPQLEQLGAPT- 110 L ++G+ LR + HG S LR+L S E+L Sbjct: 441 LNISERRLPQDGKARVRFK-GRELELRVATLPTVHGESAVLRMLTSGKALPFEKLNLSDA 499 Query: 111 ---VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 + L+ +G+ LV G TGSGK+TTL +++ +N D I T+EDPVE + Sbjct: 500 NAAQIERLMFKPHGIFLVVGPTGSGKTTTLHSILARINT-PDKKIWTVEDPVEITQPGLQ 558 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + IGL F +RA LR DPDVIL+GE+RD +T ++ + A+ TGH+V +TLHT Sbjct: 559 QVQVESAIGLD---FPRIMRAFLRADPDVILVGEMRDLQTAQIGVEASLTGHMVFSTLHT 615 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 AA+ V RL+D + +L +L+Q+L Sbjct: 616 NSAAETVTRLLDMGIES------LNFSEALHGILAQRLVKTLCAQCREAYAPSDEEWAYL 669 Query: 268 --------------------------------DKQEGRVALFELLINTPAVGNLIREGKT 295 GR+ + ELL+ TP V I + Sbjct: 670 LSQYGAEFFPELGIERSTASIYRAKGCGRCGQTGYRGRIGIHELLVATPEVRKAIARKQP 729 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 + V + + GM T Q ++ +G + Sbjct: 730 SE--EVARMAIEQGMRTLYQDGIAKIFKGDI 758 >UniRef50_Q7NH70 PilB protein n=2 Tax=Bacteria RepID=Q7NH70_GLOVI Length = 642 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 111/379 (29%), Positives = 155/379 (40%), Gaps = 71/379 (18%) Query: 5 EIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFD-TPDVEELLREWLD-----DD 55 +I+ +V SD+H+ R R G + A + ++ L D Sbjct: 226 QILDRAVAEGASDIHIEPQPAGVRVRLRRDGVLHEAGEPLSAELGLALVSRFKILSELDI 285 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQL----GAP 109 L ++G+L V R S R G + LRLL + L+QL G Sbjct: 286 AERRLPQDGRLHRRVG-ERAVDFRVSTLPGRFGEKVVLRLLDNAATRLGLDQLIGEAGTL 344 Query: 110 TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 T + EL++ +GL LVTG TG GK+TTL A + N+ +I T EDPVEY A + Sbjct: 345 TAVRELIRRPHGLFLVTGPTGCGKTTTLYAALAERNE-PGVNIATAEDPVEYTLAGITQV 403 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 RE GL FA LRA LR+DPDV+L+GE RD ET + A+ AA TGHLVL +LHT Sbjct: 404 QVIREKGLD---FARILRALLRQDPDVVLVGETRDRETAQTAIEAALTGHLVLTSLHTND 460 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 AA AV RL + +A +L VL+Q+L Sbjct: 461 AAGAVARLRELGV------APYLIASALVGVLAQRLLRRLCGECKEAYVPPPERLARFGL 514 Query: 269 ----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 +GRV ++E++ + LI T Q + + Sbjct: 515 TGGTYFRVRGQRGAACPGCGGVGYKGRVGVYEIMSLGEHLRQLIGREATTQ--TLREAAA 572 Query: 307 QVGMITFQQSYQHRVGEGR 325 GM + G Sbjct: 573 GGGMRSLLAGSLDLARAGV 591 >UniRef50_B1JEY0 Type II secretion system protein E n=6 Tax=Pseudomonas RepID=B1JEY0_PSEPW Length = 561 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 96/360 (26%), Positives = 162/360 (45%), Gaps = 49/360 (13%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ +V+ SD+HL R+RI G + V + L D Sbjct: 203 VDWLLQYAVEQRASDIHLEPRSEQGRLRYRIDGLLHTVYAFPASVTLAVVSRLKHLGHMD 262 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTVL 112 ++G++ ++ LR S G L LRL ++LG Sbjct: 263 VAEKRRPQDGRMKCSLPGGREVELRLSTLPTPFGEKLVLRLFDPQQLQEDFDRLGLEGEQ 322 Query: 113 PELLK----SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + +G++LVTG TGSGK++TL A + L + ++ T+EDP+E L + Sbjct: 323 LQQWQALLQRRHGMLLVTGPTGSGKTSTLYASLKRLAT-PEVNLCTIEDPIERLEPAFNQ 381 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 L Q + L +FA+G+RA LR+DPD+I++GE+RD ET +A+ AA TGHLVL+TLHT Sbjct: 382 LQVQPTLDL---SFANGVRALLRQDPDIIMIGEIRDRETALVAVQAALTGHLVLSTLHTN 438 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 + A+ RL++ + SL V++Q+L Sbjct: 439 DSCGAITRLLELGVPD------YLIKASLSGVMAQRLVRVLCRECQGCAASASGQPCLMC 492 Query: 268 --DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 +GR +FELL+ + ++ I G L + + G++ ++ + +V G Sbjct: 493 RGTGFDGRTGVFELLVPSESLRARI--GAGADLASLRRQALSEGLLDLKRCGEAKVARGL 550 >UniRef50_C6MUH4 Type II secretion system protein E n=2 Tax=Deltaproteobacteria RepID=C6MUH4_9DELT Length = 628 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 89/376 (23%), Positives = 155/376 (41%), Gaps = 66/376 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ + SD+H+ R R+ G + + + + D Sbjct: 255 VDFLLQYAFDQRASDIHIEPKREKSLVRLRVDGVLHNVHTVPKQLHPPIVSRIKMLSRMD 314 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPT-- 110 ++G++ + LR S G + +R+ +L+ +G Sbjct: 315 LAEKRRPQDGRIKTSHQ-GREVELRVSTLPVAFGEKVVIRIFDPDVLMQELDSIGFYPRE 373 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + L+ NG+ILVTG TGSGK+TTL + + L + +I+T+EDP+E + Sbjct: 374 YQLYSSFLRRPNGIILVTGPTGSGKTTTLYSSLRTL-SSPEVNIVTVEDPIEMVMEEFNQ 432 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q IG+ TF LR LR+DPD+I++GE+RD ET A+ AA TGHLVL+TLHT Sbjct: 433 VGVQSGIGV---TFDKVLRNVLRQDPDIIMIGEIRDKETAENAVQAALTGHLVLSTLHTN 489 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A +V RL+D + ++ +++Q+L Sbjct: 490 DAPSSVTRLIDLGVPS------FLITSTVIGIIAQRLLRKICPSCKRERQLSAEELEYLG 543 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR +FE+L + +I E L + + G Sbjct: 544 LKRAARVWSGEGCGECRGTGYKGRTGIFEVLDVNETIKAVISER--LDLAELQAAARLDG 601 Query: 310 MITFQQSYQHRVGEGR 325 ++T ++ ++ EG Sbjct: 602 LVTLREQAVRKMLEGI 617 >UniRef50_A6DAK8 Putative type ii protein secretion e n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAK8_9PROT Length = 544 Score = 372 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 97/374 (25%), Positives = 152/374 (40%), Gaps = 68/374 (18%) Query: 6 IVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DDQR 57 I+ S+ HN SD+H+ R RI G + V L + D Sbjct: 171 IIKSSIDHNASDIHIEPDEDGAIIRIRIYGTLFEKWDFDIGVYNALSSRIKLEAGMDVSE 230 Query: 58 AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV---- 111 ++G + + R S G S+ +R+L L+ +G Sbjct: 231 KRKPQDGSFSMDID-GNHFDFRVSTLPTVWGESIVIRILDKRNIVKSLDSIGISPQNLEL 289 Query: 112 LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQ 171 L LK NG++LVTG TGSGK+TTL A + + D ++T+EDPVEY + + Sbjct: 290 LKSGLKKPNGILLVTGPTGSGKTTTLYASLHEI-TGIDRKVITVEDPVEYKLHGIQQVEV 348 Query: 172 QREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAA 231 + GL TFAS L++ LR+DPD+I++GE+RD ET+ +A+ AA TGHLVL+TLHT A Sbjct: 349 NPKTGL---TFASALKSILRQDPDIIMIGEIRDLETLEIAIKAALTGHLVLSTLHTNDAV 405 Query: 232 QAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------------ 267 A+ R++D +A L V +Q+L Sbjct: 406 SAISRMIDMGAE------PYMVAAGLVGVEAQRLVKKNCPHCITKYKPSDAFLEPIKHII 459 Query: 268 -----------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGM 310 GR + E+ + + ++I + K + + + G Sbjct: 460 PPNAVFYKGRGCDRCNMTGYIGRTMVSEIFLVDEKLESMIAKNKDK--TEINEYLKSKGY 517 Query: 311 ITFQQSYQHRVGEG 324 + +G Sbjct: 518 KNMFYDGLIKALKG 531 >UniRef50_Q7NM48 General secretion pathway protein E n=1 Tax=Gloeobacter violaceus RepID=Q7NM48_GLOVI Length = 525 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 103/383 (26%), Positives = 162/383 (42%), Gaps = 73/383 (19%) Query: 2 NMEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD----- 53 ++ ++ ++K SD+HL S R+RI G + + L + Sbjct: 143 QLQRLLNEALKSRASDIHLESQEDGLRVRFRIDGLLREMGTFPVAESKALISRVKVLAEL 202 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCP--QLEQLGAPTV 111 D ++G++ ++ + LR S HG LRLLP + LE+LG Sbjct: 203 DIANHRSPQDGRVTQEIN-GQLVDLRVSTLPCLHGEKAVLRLLPKNNTFTLLEELGFDAA 261 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 L GLIL+TG TGSGK++TL + + + + +I+T+EDP+EY A Sbjct: 262 DLATYRHWLGRAQGLILITGPTGSGKTSTLYTSLRGILK-PECNIVTIEDPIEYQLAGIN 320 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + GL TFASGLR+ LR+DPD+I++GE+RD ET + AA TGHLVL TLHT Sbjct: 321 QVQVHPKAGL---TFASGLRSILRQDPDIIMVGEIRDLETAQTVFQAAMTGHLVLCTLHT 377 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A AV RL+D +AG+L V++Q+L Sbjct: 378 NDAPSAVSRLLDMQVE------PYLIAGALVGVVAQRLVRRVCRHCGEPYCPDSVDLQRL 431 Query: 269 ---------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 GR +FE++ + LI ++ + Sbjct: 432 KLDAHPEYANVPLEWKRAHGCQHCFGSGYFGREGIFEVMEVDNHLQGLIHARASN--AEI 489 Query: 302 IQTGQQVGMITFQQSYQHRVGEG 324 + + + ++ +V EG Sbjct: 490 TTYLRARNIRSLPEAGIAKVMEG 512 >UniRef50_A6W7B3 Twitching motility protein n=6 Tax=Bacteria RepID=A6W7B3_KINRD Length = 396 Score = 371 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 133/326 (40%), Positives = 187/326 (57%), Gaps = 6/326 (1%) Query: 7 VALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPD---VEELLREWLDDDQRAILLEN 63 + V SDLH + P R RI GR+ A E +L + L D Sbjct: 45 LRALVDLRGSDLHCKAGSPPRIRIDGRLRALQAPALTADVTERMLEQILRPDLVEEFART 104 Query: 64 GQLDFAVSLA-ENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGL 122 + DFA SL R R +AF QR + L LR + + L LG P V+ +L GL Sbjct: 105 HEADFAYSLPHGAGRFRVNAFRQRGSVGLVLRRVAAQAVPLAGLGVPPVIEQLALEHRGL 164 Query: 123 ILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTF 182 +LVTG TGSGK+TTLA M+ ++N ++HI+T+EDP+E L+ R +I QRE+ L F Sbjct: 165 LLVTGPTGSGKTTTLAGMIDHINTVRESHIVTIEDPIEVLHTDNRSMISQREVRLDTADF 224 Query: 183 ASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFP 242 + LRAA+R+DPDVIL+GE+RD ET++ AL+AAETGH V++TLHT AA+ + R++D FP Sbjct: 225 TTALRAAMRQDPDVILVGEMRDQETVKAALSAAETGHFVMSTLHTIDAAETIARIIDFFP 284 Query: 243 AQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIRE-GKTHQLPH 300 E+ VR LAGSLR ++ Q+L GR + E+ +NT + + I + KT Q+ Sbjct: 285 PHEQKQVRLALAGSLRGIVCQRLVPRADGAGRCVVMEVCVNTGRIADAISDPDKTSQITD 344 Query: 301 VIQTGQQVGMITFQQSYQHRVGEGRL 326 +I+ GQ M TF Q V +G + Sbjct: 345 LIREGQYYRMQTFDQHLVALVRDGVV 370 >UniRef50_Q7UE44 General secretion pathway protein E n=1 Tax=Rhodopirellula baltica RepID=Q7UE44_RHOBA Length = 587 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 102/380 (26%), Positives = 159/380 (41%), Gaps = 70/380 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ I++ +V SD+HL R+R+ G ++ +E+ + + D Sbjct: 183 VQAILSGAVSAGASDIHLEPHKPEMRVRYRVDGELQVVMTIPNHIEDSVISRIKVMGDMD 242 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 ++G L + R S G L LRLL L +G P Sbjct: 243 TTENRRPQDGHLTV-YENGKRVGFRISGIPTVDGQKLVLRLLDEGGQTFDLAGIGMPQRD 301 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++ +G+ +VTG TGSGKSTTL A + +LN D +I+T+EDPVEY Sbjct: 302 YETIRRVIDKPHGMFVVTGPTGSGKSTTLYAALQHLNDD-DRNIVTVEDPVEYRLPGINQ 360 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + E G M FA+ L+ +R+DPDVI+LGE+RD ET A+ AA TGHLV++TLHT Sbjct: 361 VQSDNEFG---MGFANALKYIMRQDPDVIMLGEIRDCETATTAVQAALTGHLVISTLHTN 417 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A AV+RL D ++AGSL ++Q+L Sbjct: 418 DAVGAVQRLADLGVDN------FKIAGSLLGSVAQRLLRCVCENCKVDAPANLNLLDALD 471 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GRV +FE++ + I G + + + Sbjct: 472 PEQFVPRDTTFVRGAGCKRCLGTGFAGRVPIFEIMPLNSDITAAIEAGVPN--SQLEEMA 529 Query: 306 QQVGMITFQQSYQHRVGEGR 325 GM+ +++ G+ Sbjct: 530 HAAGMVPLRRAGLEAAIAGK 549 >UniRef50_Q30QR7 Type II secretion system protein E n=4 Tax=Epsilonproteobacteria RepID=Q30QR7_SULDN Length = 577 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 103/380 (27%), Positives = 166/380 (43%), Gaps = 68/380 (17%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD---- 53 + ++ I++ +K SD+H+ R RI G++ D+ L L Sbjct: 200 LLIDVILSTCIKDRSSDVHIEPTEKNCVIRTRIDGKLVEIFIFEKDIFPPLASRLKLLAN 259 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAP- 109 D ++G+ V + R S +G S+ +R+L +LE G Sbjct: 260 LDIAEKRKPQDGRFSIMVG-TRDYDFRISTLPILYGESIVMRVLDKQKALVRLEDAGMDS 318 Query: 110 ---TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 + L+ GLILVTG TGSGK+TTL + L ++ + I+T+EDPVEY Sbjct: 319 LSYQKFLKSLQIPYGLILVTGPTGSGKTTTLYGALNEL-RNIEDKIITVEDPVEYRMNLI 377 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + ++GL TFA+ LR+ LR+DP+ I++GE+RDSET+ +A+ A+ TGHLVL+TLH Sbjct: 378 QQVQVNPKVGL---TFATALRSILRQDPNKIMIGEIRDSETLEIAIKASLTGHLVLSTLH 434 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------ 268 T + AV R+VD ++GSL A+ +Q+L Sbjct: 435 TNNSISAVTRMVDMGI------APYLISGSLVAIQAQRLVRKICLNCKVEDKVSSSAFEE 488 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR + E+L+ + +LI + + QL + Sbjct: 489 VKNLAPAHSKFYIGKGCKECRGSGYLGREMICEVLVINEKISSLIAKNASAQL--IHAQA 546 Query: 306 QQVGMITFQQSYQHRVGEGR 325 + G I Q+ + G Sbjct: 547 LEDGFIDLLQNGIDKALFGI 566 >UniRef50_A5N7G6 ExeE2 n=3 Tax=Clostridium RepID=A5N7G6_CLOK5 Length = 498 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 95/376 (25%), Positives = 166/376 (44%), Gaps = 68/376 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ ++ SDLH+ + R RI G + +V LL + Sbjct: 127 INYIIDKAIDERASDLHIEPFQSSVTIRMRIDGIIGEYIKIPLNVYPLLCTRIKIMADMN 186 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGA---- 108 + ++G++ + V N LR S +G + +R+L L LG Sbjct: 187 IAEKRMPQDGKIKY-VKQKLNYDLRVSTLPTIYGEKIVIRILYKDEGIKHLNTLGFLKQD 245 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++ +GLIL G TGSGKSTTL +++ +++ + +I+++EDPVEY + Sbjct: 246 EKKIRNMISKGHGLILAVGPTGSGKSTTLYSILNTMDK-YEKNIVSIEDPVEYTVENINQ 304 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + +IGL FA GLR+ LR+DPDVI+LGE+RD ET +A+ AA TGHLV++TLHT Sbjct: 305 VNVNSKIGLD---FAKGLRSILRQDPDVIMLGEIRDEETAHIAIRAAVTGHLVISTLHTN 361 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A +++ RL D A+ + +L ++SQ+L Sbjct: 362 DALESIVRLKDMGIAE------YFIEDALIGIISQRLVRKICPYCKTKYVPSSREVKELN 415 Query: 268 ------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 +GR +E++ + ++ + ++ + +Q Sbjct: 416 LLSTDVLYRGEGCIKCNYTGYKGRTVAYEIVHSGHIEKGCLKNN----IANIREKVKQSN 471 Query: 310 MITFQQSYQHRVGEGR 325 M++ +Q+ + G Sbjct: 472 MVSLKQNCIELIKSGV 487 >UniRef50_B2KC07 Type II secretion system protein E n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KC07_ELUMP Length = 576 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 104/384 (27%), Positives = 157/384 (40%), Gaps = 74/384 (19%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++ SD+HL R+RI G + + + + D Sbjct: 192 VNAILKQAISERTSDIHLEMFDEMVSLRFRIDGALYERTPPPKESVAAIISRIKILSKLD 251 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 L ++G +R S G L LR+L +E+LG Sbjct: 252 IAEKRLPQDGSFAIKYQ-NRTIEVRVSVCPTVFGEKLVLRILDKGTSVLTIERLGFEPRQ 310 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 +GLI +TG TGSGKSTTL A++ + + + + +TLEDPVEY Sbjct: 311 REDFLSAANLPHGLIFLTGPTGSGKSTTLNAVLSTI-KTTELNFMTLEDPVEYKLQGISQ 369 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + +IGL TFA+GLR+ LR+DPDVIL+GE+RD+ET L AA TGHLVL+TLHT Sbjct: 370 VQVKPQIGL---TFAAGLRSFLRQDPDVILVGEVRDNETAESCLKAALTGHLVLSTLHTN 426 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A A+ RL+D L+ SL V +Q+L Sbjct: 427 EALGAIPRLIDMGME------AFLLSSSLALVAAQRLIRKLCPHCRRPFTPSPELVEQAL 480 Query: 268 --------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 GR+A++E+ + N+I KT L + Sbjct: 481 RESKLPPGDKDTWTFYQKVGCPKCSETGYLGRMAIYEVFKINEEMRNIIY--KTQDLIDL 538 Query: 302 IQTGQQVGMITFQQSYQHRVGEGR 325 + ++ G + S + +G Sbjct: 539 NRAAERSGAWNLRASGWRKAVKGL 562 >UniRef50_Q028H4 Twitching motility protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028H4_SOLUE Length = 383 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 131/328 (39%), Positives = 190/328 (57%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQRAI 59 +++++ + SD+ L + P R+ G + A D DV L+ L+ Q Sbjct: 36 LDQLLHAAAGRGASDVLLIAGAPPMLRVTGNLTAGGGTVLDAEDVRSLVLPLLEHAQLEE 95 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 L + +D + R R + QR ++ ++RLLPS P +E L P L +L Sbjct: 96 LQKRKSVDLSFVRENIGRFRVNIHHQRGTLAASIRLLPSRIPSIESLHLPGSLAKLADRR 155 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 GL+LVTG TG GKS+TLAA++ +N AH++T+EDPVEY +A++ +I+Q E+G Sbjct: 156 QGLVLVTGPTGCGKSSTLAALIDIVNTRRAAHVVTIEDPVEYQHANRSAIIEQIEVGRDT 215 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 FA LR+ +R+ PDVIL+GE+RD+ETI ALTAAETGHLV +TLHT A QA R++D Sbjct: 216 PDFAVTLRSIMRQTPDVILVGEMRDAETIATALTAAETGHLVFSTLHTNDAIQATSRILD 275 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 SFPA + +R QL+ +L AV++Q+L R E++I T AV LIR+G HQL Sbjct: 276 SFPAGNQPQIRQQLSLALAAVIAQQLVPGLDGVSRWPATEIMIATDAVRALIRKGDDHQL 335 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 I G+ GM+T +QS V R+ Sbjct: 336 RSQISVGRAEGMMTMEQSLTELVKSNRI 363 >UniRef50_C6Y3P1 Type II secretion system protein E n=2 Tax=Sphingobacteriaceae RepID=C6Y3P1_PEDHD Length = 477 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 99/378 (26%), Positives = 168/378 (44%), Gaps = 70/378 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 +E ++A + + SD+H+ + R RI G + + + + D Sbjct: 103 LENLIAEAKRLKSSDIHIETYEEKCRVRIRIDGMLIERYLLSRLEYPAIINRIKILANLD 162 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPT-- 110 L ++G+++F + + +R S +G + LRLL + ++ LG Sbjct: 163 IAEKRLPQDGRINFKTAQHQ-FDIRVSVLPTLYGEKVVLRLLNNDATNIDLYTLGFAEGD 221 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 E +K NG++L++G TGSGK+TTL A + LN++ +ILT+EDP+EY Sbjct: 222 LNNYLEGVKRPNGIVLISGPTGSGKTTTLYATLKLLNKN-TRNILTIEDPIEYTLDGINQ 280 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + IGL TFA+ LR LR+DPDVI++GE+RD ET +A+ AA TGHLVL+T+HT Sbjct: 281 VQLKENIGL---TFAAALRTFLRQDPDVIMVGEIRDPETANMAIRAALTGHLVLSTIHTN 337 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 A + RL+D +A +L ++Q+L Sbjct: 338 SAWGTISRLMDMGIP------PFLVANTLNTSVAQRLVRLLCPHCKTQSSMEHSLYPKSF 391 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 +GR A++E++ + I+ G +Q P + ++ Sbjct: 392 NPPEKVDVHWMAKGCDQCYFTGYKGRKAVYEVIPLDQELAFQIKAG--NQQPEAL--LKE 447 Query: 308 VGMITFQQSYQHRVGEGR 325 G+ T ++ G Sbjct: 448 RGIYTIGENAFALFAHGH 465 >UniRef50_C8X565 Type II secretion system protein E n=2 Tax=Desulfovibrionales RepID=C8X565_DESRD Length = 599 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 100/379 (26%), Positives = 161/379 (42%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAWP---ARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 ++ ++ +++ SD+HL R+RI G + V + + D Sbjct: 218 VDYLLQSALRERASDIHLEPKRDHSLVRFRIDGVLHPLYRLPLTVHRAMVSRIKGLSRLD 277 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV- 111 ++G++ + + +R S G + LRLL SH P +QLG Sbjct: 278 ISEKRRPQDGRVQLVLEH-KPTDVRVSTLPVAFGEKMVLRLLSSHADLPAPDQLGMDADQ 336 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L +GL+LVTG TGSGKSTTL + + L +++T+EDP+E + Sbjct: 337 FSLFERFLARTHGLLLVTGPTGSGKSTTLYSALHSL-SSPLVNVVTVEDPIEMVMDDFNQ 395 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + Q +IG FA+ LR LR+DPD+I++GE+RD ET A+ AA TGHLV +TLHT Sbjct: 396 IGLQPQIGF---GFAATLRHILRQDPDLIMVGEMRDLETAEQAVQAALTGHLVFSTLHTN 452 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 AA ++ RLVD + + +L +++Q+L Sbjct: 453 DAASSLTRLVDLGLPE------YLINAALVGIIAQRLVRRICPYCKREHRLSSQTLQHWG 506 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+ +FE+L T ++ +R G + + Sbjct: 507 LSQWANDPPRLWEGKGCDACRFTGYLGRIGIFEILPFTASLQEAMRTG--ADVEDLRGIV 564 Query: 306 QQVGMITFQQSYQHRVGEG 324 Q+ G+ T S R +G Sbjct: 565 QREGLTTLLDSGLQRALKG 583 >UniRef50_C4GX47 General secretion pathway protein E n=42 Tax=Gammaproteobacteria RepID=C4GX47_YERPN Length = 503 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 103/381 (27%), Positives = 160/381 (41%), Gaps = 73/381 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ ++K SD+H+ S R+RI G + V LL + D Sbjct: 120 INSILVEAIKELASDIHIESFDKKLTVRFRIDGVLRKILELQRHVALLLVSRIKVMAKLD 179 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPTV- 111 + ++G++ ++ +R S HG + +RLL + +L+ LG Sbjct: 180 IAEKRIPQDGRIALNLA-GRALDVRVSVLPSSHGERVVMRLLDKNSIKLDLPSLGMSKDN 238 Query: 112 ---LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + + +G+ILV G TGSGKSTTL A + ++ + + +I+T+EDP+E+ Sbjct: 239 CISMNTQVHKPHGIILVVGPTGSGKSTTLYAALMGIDAN-EKNIMTVEDPIEFDIPGISQ 297 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 +I MTFA LRA LR+DPDVIL+GE+RD ET ++A+ A+ TGHLVL+TLH Sbjct: 298 TQVNPKI---EMTFARSLRAILRQDPDVILIGEIRDIETAQIAVQASLTGHLVLSTLHAN 354 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A AV RL D L+ SL A++SQ+L Sbjct: 355 SAIGAVTRLKDMNVE------AFMLSSSLLAIISQRLVRRLCIACRQESSVTEKVLQRLN 408 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREG-KTHQLPHVIQT 304 GR+AL E L+ + I +G +L + Sbjct: 409 IDDKCSLVGSVYRAKGCNKCNLTGYRGRIALHEFLVVDNLLRGAIYKGLGEFELAKLASG 468 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 + +V G Sbjct: 469 AIN----SLLSDGISKVIAGL 485 >UniRef50_D1VVV4 Type II secretion system protein E n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVV4_9FIRM Length = 482 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 88/369 (23%), Positives = 159/369 (43%), Gaps = 59/369 (15%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + I+ S++ + SD+H+ + R RI G + ++ L + D Sbjct: 111 LNYILNFSIEKDASDIHIENLEDSVLVRVRIDGSLHELSKFPKNLYPYLITRIKVMAKLD 170 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQL--EQLGAP--- 109 L ++G+ F N +R + +G + R+L E +G Sbjct: 171 IAEKRLPQDGRFSFNFR-GRNIDIRVATSPTAYGEKIVFRILDVGRVDYSPEGIGLSGEN 229 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +++ GL+L++G T SGK++TL ++ Y+ Q++ +I+T+EDP+EY A Sbjct: 230 LKKILKVISQPQGLVLISGPTSSGKTSTLYTILKYI-QNSQINIMTIEDPIEYKIAGINQ 288 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + GL +F GL++ LR DPD I++GE+R+ ET +A++A+ +GH V +T+HT Sbjct: 289 VEVNENTGL---SFERGLKSILRMDPDKIMIGEIRNKETAHIAVSASISGHTVFSTIHTE 345 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + V RL+D ++ L V+SQ+L Sbjct: 346 NSPAVVGRLIDMGIE------PYLVSAGLIGVISQRLIRKLCPHCKEKEISNNPFFKGKE 399 Query: 269 ------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQS 316 +GR+A+FE++I + +I E K+ + + GM T Sbjct: 400 IYKKRGCPKCNGGYKGRIAVFEIMIVDETLKEMISEKKS--IGKIKNYAISQGMKTLASE 457 Query: 317 YQHRVGEGR 325 V G+ Sbjct: 458 ILSLVENGQ 466 >UniRef50_P36645 Protein transport protein hofB n=106 Tax=Enterobacteriaceae RepID=HOFB_ECOLI Length = 461 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 109/374 (29%), Positives = 157/374 (41%), Gaps = 64/374 (17%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + +++ SD+H+ A + R RI G + P +PD L L D Sbjct: 85 LTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLD 144 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPS--HCPQLEQLGAPT-- 110 L ++GQ ++ R + R G + LRLL + LG Sbjct: 145 IAEHRLPQDGQFTVELA-GNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQ 203 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L+ GL+LVTG TGSGK+ TL + + LN AD +I ++EDPVE A Sbjct: 204 LADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNT-ADINICSVEDPVEIPIAGLNQ 262 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 GL TF LRA LR+DPDVI++GE+RD ET +A+ AA+TGHLVL+TLHT Sbjct: 263 TQIHPRAGL---TFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTN 319 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 + + RL R L+ +L V++Q+L Sbjct: 320 STCETLVRLQQMGV------ARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVW 373 Query: 269 -----------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMI 311 GR ALFE+L TP + LI + + +Q GM Sbjct: 374 PSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISAN--TDVESLETHARQAGMR 431 Query: 312 TFQQSYQHRVGEGR 325 T ++ V +G Sbjct: 432 TLFENGCLAVEQGL 445 >UniRef50_C6BTY4 Type II secretion system protein E n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTY4_DESAD Length = 479 Score = 370 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 96/378 (25%), Positives = 158/378 (41%), Gaps = 68/378 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + + ++ SD+H + R+R G ++A ++ + + D Sbjct: 103 VNKTLHQAISTGASDIHFEGQGNGFVVRYRQDGVLKAVKRLDKGLQPTVIARIKVMGEMD 162 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGA---- 108 + ++G++ + + +R S G LR+L + LE LG Sbjct: 163 VAESRKPQDGRIFLKLGQ-KEVDVRVSTIPTMSGEKAVLRVLDRSKNILNLEDLGLKGPD 221 Query: 109 PTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + ++L +G++LVTG TGSGK+T+L A + L + D +I+T+EDPVEY + Sbjct: 222 LELFRKVLAQPHGIVLVTGPTGSGKTTSLYAGLSELPRD-DKNIVTVEDPVEYQLSGVNQ 280 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + G MTFA+ +R+ LR+DPD+IL+GE+RD ET A+ A+ TGHLVL+TLHT Sbjct: 281 VQVNKAAG---MTFATTIRSFLRQDPDIILVGEIRDQETASTAVQASLTGHLVLSTLHTN 337 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------------- 267 AA AV R++D L Q+L Sbjct: 338 DAATAVTRMLDMGIEPFLLASSLSLVLG------QRLVRVNCKHCSRKVEVSENTYKLFE 391 Query: 268 --------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQ 307 GR ++EL+ T + LI E + + ++ Sbjct: 392 ETAGLPSTQTAGAGCEHCNFTGFSGRRGVYELIPVTEDMRGLIMEVASSD--QIKAYAKE 449 Query: 308 VGMITFQQSYQHRVGEGR 325 +G T V EG Sbjct: 450 MGRETMVDHGIRLVREGV 467 >UniRef50_D1Y3N0 Twitching mobility protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3N0_9BACT Length = 361 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 136/328 (41%), Positives = 192/328 (58%), Gaps = 6/328 (1%) Query: 5 EIVALSVKHNVSDLHLCSAWPARWRIRGRMEA---APFDTPDVEELLREWLDDDQRAILL 61 + + + SD+HL +R+ GR+E A + +R L + Sbjct: 8 ALFDEAAERRASDVHLSCGRAPLFRVDGRLEDGGRAVVGREWLLASIRRMLSAAEWDDWE 67 Query: 62 ENGQLDFAVSLAEN---QRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 N + A +R R S F + A+RL+P+ P EQ G P VL L Sbjct: 68 LNKSVSAAHEFGAPSAPRRFRLSCFRSMGQPAAAIRLIPARIPAPEQCGLPAVLKGLCAK 127 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 +GL+L TG +GSGKST LA++V +LN+ HI+TLEDP+E+++ +R L+ QR+IG Sbjct: 128 GHGLLLFTGPSGSGKSTALASLVDWLNETCRIHIVTLEDPIEFVHEGKRALLHQRQIGRD 187 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 C +FA+GLR ALR+DPDVI +GE+RD ETI A+TAAETGHLVLATLH A QAVER++ Sbjct: 188 CPSFAAGLRDALRQDPDVIGIGEMRDGETISAAITAAETGHLVLATLHAPDAPQAVERII 247 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 D+FPA ++ VR Q A SL V + +L + GR E+L+ TPAV + IRE +T QL Sbjct: 248 DAFPAAQQAQVRAQTALSLAGVCAMRLVPQRAGGRCLATEMLVATPAVRSAIRESRTAQL 307 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++QT ++ GM T +QS V + R+ Sbjct: 308 KTILQTSRRDGMYTMEQSLLKLVEQKRI 335 >UniRef50_B9YDY2 Putative uncharacterized protein n=6 Tax=Bacteria RepID=B9YDY2_9FIRM Length = 357 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 121/332 (36%), Positives = 188/332 (56%), Gaps = 6/332 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGR---MEAAPFDTPDVEELLREWLDDDQR 57 M+ I+ +V SD+ + + P +I G ++ E L++E Q Sbjct: 1 MDCPTILQQAVDRRASDIFIVAGTPLTIKINGEMVQLDDQRLTPAMTEALIQEIFKLSQN 60 Query: 58 A---ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPE 114 L + G+ DF+ SL++ R R + + QR ++ LR++ P +L + Sbjct: 61 RTMDRLHQTGEDDFSFSLSQMGRFRVNVYRQRGSLAAVLRVVRFVLPDANELHIGPEILS 120 Query: 115 LLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQRE 174 + + GL+L+TGA GSGKSTTLA ++ +N HI+T+EDP+E L+ Q+ ++ QRE Sbjct: 121 FSELKKGLVLITGAAGSGKSTTLACLIDAINHSRSGHIITIEDPIEVLHRHQKSIVSQRE 180 Query: 175 IGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAV 234 IG + L AALRE PDVIL+GE+RD ET++ L+AAETGHLV ++LHT GAA + Sbjct: 181 IGQDTPDYIHALTAALREAPDVILVGEMRDLETMQTVLSAAETGHLVFSSLHTTGAANTI 240 Query: 235 ERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGK 294 R++D FPA+++ +R QL+ L+A++SQ+L G + FE++ AV IRE K Sbjct: 241 NRIIDVFPAEKQQQIRVQLSMVLQAIVSQQLIPAVGGGLIPAFEIMKVNNAVQTQIRENK 300 Query: 295 THQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 HQ+ + IQ + GMIT S + + GR+ Sbjct: 301 IHQIDNTIQANAREGMITMDASLLNLLKAGRI 332 >UniRef50_B3E8J7 Twitching motility protein n=8 Tax=Desulfuromonadales RepID=B3E8J7_GEOLS Length = 357 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 122/330 (36%), Positives = 193/330 (58%), Gaps = 7/330 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAI 59 + +I+ ++ + VSDLH P +R G++ + D E + + L Sbjct: 6 LNQILGIAFEKRVSDLHFEVDNPPFFRAHGQLIRSKLPSLTPQDTEFIAKTVL-AQSNRQ 64 Query: 60 LLENGQ-LDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L E+ + LD A +L R R S F QR + + +R++P + +L P VL E+ ++ Sbjct: 65 LPEDLRELDAAYALPNGGRFRVSIFRQRCSVGIVMRVIPPYIAAFNELNLPPVLGEICQA 124 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 NGLILVTG TG+GKSTTLA+M+ ++NQ+ +I+T+EDP+E+L+AS + I QRE+G+ Sbjct: 125 PNGLILVTGPTGNGKSTTLASMLQFINQNDSFNIITIEDPIEFLFASDKSCIIQREVGID 184 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 +F++ L+A+LR DPDVI++GE+RD ETI + AAETGHLV +TLHT+ A+ + RLV Sbjct: 185 TGSFSAALKASLRMDPDVIMVGEMRDLETIDSCIKAAETGHLVFSTLHTQSASSTINRLV 244 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRV-ALFELLINTPAVGNLIREGKTHQ 297 FP ++ +R +LA L A +S +L DK RV + E++ T + IREG+ + Sbjct: 245 GHFPPDAQEVIRQRLADILVATISLRLINDKTGERVLPVVEIMRTTTTIQACIREGRFDE 304 Query: 298 LPHVIQTGQ-QVGMITFQQSYQHRVGEGRL 326 + I+ G+ Q M + Q + + Sbjct: 305 IEKHIENGRTQYQMQSLDQHLVQLCQQELI 334 >UniRef50_Q2LRM4 Pili retraction protein n=11 Tax=Bacteria RepID=Q2LRM4_SYNAS Length = 404 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 127/338 (37%), Positives = 196/338 (57%), Gaps = 13/338 (3%) Query: 2 NMEEIVALSVKH--NVSDLHLCSAWPARWRIRGRMEAAPFDTP-------DVEELLREWL 52 ++ I+ + NVSDL++ P + G++ A FD P E + + Sbjct: 19 ELDYILTKMLDAYDNVSDLNMTVGKPFQVESSGQLTAVDFDPPCEKLTPFQTETIALNLI 78 Query: 53 DDDQR--AILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPT 110 + D+R L+ G D + +L R R + F+QR S+ LR L + P L+ L P Sbjct: 79 NGDRRLTETLVAEGSCDSSYTLQGKARFRVNIFSQRGNYSIVLRKLETRIPTLQDLNLPE 138 Query: 111 VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 ++ + +NG+ILVTGATGSGKST+LAAM+ +N+ H++TLEDPVE+++ ++ Sbjct: 139 AFEKMAQEKNGIILVTGATGSGKSTSLAAMLNEINERKSVHVVTLEDPVEFVHPHKQATF 198 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 QRE+G TFA+GLRAALR+ P VIL+GE+RD ET+ +AL+AAETGHLV++TLHT A Sbjct: 199 NQREMGTDFDTFANGLRAALRQAPKVILVGEMRDRETVEIALSAAETGHLVVSTLHTVDA 258 Query: 231 AQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLI 290 Q + R++ F +E+ +R +LA ++R ++ Q+L + GRVA FE++ N V + I Sbjct: 259 GQTINRILGMFSIEEERQIRIRLADTVRWIVCQRLLPKEGGGRVAAFEVMGNNLRVKDTI 318 Query: 291 REGKTHQ--LPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 G++ +IQ G+ GM+TF G + Sbjct: 319 LNGESEGKTFYEIIQAGKAFGMVTFDDYIVELYQRGLV 356 >UniRef50_B8GL39 Twitching motility protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GL39_THISH Length = 364 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 128/328 (39%), Positives = 197/328 (60%), Gaps = 4/328 (1%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFD---TPDVEELLREWLDDDQRAI 59 + + L + SDLHL P R+ G + F ++E + E L QR Sbjct: 4 INAFLKLGREQGCSDLHLAVGVPPMLRMNGDLMPIKFRDLGERELEAYVLEILTPTQRKR 63 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSE 119 + LDF+ E R R + F + G+ R +P+ PQL++LG P+V+ EL++ Sbjct: 64 FRDGEDLDFSYVAEEVGRFRVNLFRKATGVGATFRHVPATVPQLDELGLPSVVHELIEHH 123 Query: 120 NGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHC 179 G++LVTG+TG+GKSTTLAA++ ++N +IL+LEDP+E+++ S++ + QRE+G H Sbjct: 124 QGMVLVTGSTGTGKSTTLAAIIDHINNRRAVNILSLEDPIEFVHHSKKAQVIQREVGTHV 183 Query: 180 MTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVD 239 ++A GLRAALREDPDVIL+GELRDSE+I +A+ AAETGHLVL TLHT A + ++R++D Sbjct: 184 QSYADGLRAALREDPDVILVGELRDSESITMAMIAAETGHLVLGTLHTTSAVKTIDRILD 243 Query: 240 SFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQE-GRVALFELLINTPAVGNLIREGKTHQL 298 + P + ++ + L+ +L VL+Q L GR A+ E L+ T A+ +I K HQ+ Sbjct: 244 AIPIELREQGKTFLSQNLHGVLTQNLVKKADGRGRQAVVESLVVTRAIAKMIMTDKVHQI 303 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 P +QTG+ GM Q+ + + + Sbjct: 304 PSQMQTGRDRGMQLLDQALMEALEKKLI 331 >UniRef50_A3RPD3 GspE-related protein n=4 Tax=Ralstonia solanacearum RepID=A3RPD3_RALSO Length = 541 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 154/368 (41%), Gaps = 58/368 (15%) Query: 3 MEEIVALSVKHNVSDLHLC---SAWPARWRIRGRMEAAPFDT-PDVEELLREWLD----- 53 ++ ++ + + SD+H+ S + R+ G + P T + + Sbjct: 173 LDAVLLDAWRAGASDIHVETSRSGLHIKLRLDGVLVPGPAFTGARSPSEVLNRIKVLAQL 232 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP-------SHCPQLEQL 106 D L ++G+ + + +R S G +RLL S LE L Sbjct: 233 DIGETRLPQDGRFRVRLE-GRDVDMRVSIMPNVFGEDAVIRLLDKAQLRGASETLTLEAL 291 Query: 107 GAP----TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYL 162 G + L K +G++LVTG TGSGK+TTL A + +N D I+T+EDPVEY Sbjct: 292 GFDTAATATIRRLTKEPHGMLLVTGPTGSGKTTTLYAALSEINTGRD-KIITIEDPVEYE 350 Query: 163 YASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVL 222 + + + GL TFA GLR+ LR DPD IL+GE+RDSET +A+ AA TGHLV Sbjct: 351 LSGILQIPVNEKKGL---TFARGLRSVLRHDPDQILVGEIRDSETAEIAVQAALTGHLVF 407 Query: 223 ATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV--------------- 267 ++H A V R + +L ++SQ+L Sbjct: 408 TSVHANSALDVVGRFLHMGVD------PYNFMSALIGIVSQRLLRLKCPECAPASPDPGC 461 Query: 268 ----------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSY 317 GR ++E++ + L+ + L + + +Q+G+++ + Sbjct: 462 RSIGCPACRYTGYRGRTVVWEIVPVNDTIRELVIRREP--LRLIREQSRQMGVVSLRDQA 519 Query: 318 QHRVGEGR 325 V G Sbjct: 520 VRMVERGL 527 >UniRef50_Q1CLY6 Type II secretion system protein n=40 Tax=Enterobacteriaceae RepID=Q1CLY6_YERPN Length = 518 Score = 369 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 99/373 (26%), Positives = 160/373 (42%), Gaps = 63/373 (16%) Query: 3 MEEIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + + ++L+++ SD+H + R RI G + + + L + Sbjct: 139 ITQTLSLAIQKRASDIHFEPYQHHYRVRLRIDGVLHEFTPPEAEWAARISSCLKVMAKLN 198 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP-SHCPQLEQLGAP---- 109 L ++GQL + +R + ++G + LR+L LE+LG Sbjct: 199 IAERRLPQDGQLTLPFGDSH-YSMRIATLPTQYGEKVVLRILQIQQQTTLEKLGMTDAAL 257 Query: 110 TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 L + L + GLILVTG TGSGK+ TL + LNQ +I ++EDP+E Sbjct: 258 KQLTQALSAPQGLILVTGPTGSGKTITLYCSLARLNQT-QRNICSVEDPIEIPVNGINQT 316 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 +IGL F+ LRA LR+DPDVI++GE+RD+ET +A+ AA+TGHLVL+TLHT Sbjct: 317 QVNSKIGLD---FSRILRAILRQDPDVIMVGEIRDNETASIAVNAAQTGHLVLSTLHTNS 373 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD--------------------- 268 A+ + R+ R+ +A SL+ V++Q+L Sbjct: 374 TAETLIRMAQMGIE------RHLIASSLKLVIAQRLVRRLCLHCRQAASHPFIPPAHIRS 427 Query: 269 ----------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMIT 312 GR ++E+L TP + I + ++Q Q+ Sbjct: 428 GPIQHYLAVGCEHCCTGYYGRTGIYEMLSVTPQIQQAILNNASP--VKLVQIAQKQEQTA 485 Query: 313 FQQSYQHRVGEGR 325 S + +G Sbjct: 486 LLCSGLALIEKGI 498 >UniRef50_Q0BR98 General secretion pathway protein E n=4 Tax=Acetobacteraceae RepID=Q0BR98_GRABC Length = 600 Score = 368 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 108/383 (28%), Positives = 157/383 (40%), Gaps = 74/383 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPD--VEELLREWLD---- 53 + +I++ +V+ SD+H+ R+R G + A + + + Sbjct: 213 VNQIISRAVETGASDIHIEPFEDRIAIRYRYDGVLHEAEGVSARGGSAAAITSRIKIMAR 272 Query: 54 -DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAP- 109 D L ++G+L AV + R S +G ++ +R+L E +LG Sbjct: 273 LDIAERRLPQDGRLKLAVR-GQEVDFRVSTVPSLYGETVVMRILDRSAVAFEFNRLGLRA 331 Query: 110 ---TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 L L NG++LVTG TGSGK+TTL A + LN I+T+EDPVEY Sbjct: 332 TVREKLERCLSMPNGIVLVTGPTGSGKTTTLYAGLNSLNS-PTRKIVTIEDPVEYQLRGI 390 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 + + +IGL +FA+ LRA LR+DPDVI++GE+RD ET +++ AA TGHLVL+TLH Sbjct: 391 NQIQVKPQIGL---SFAALLRAILRQDPDVIMVGEVRDLETAQISAQAALTGHLVLSTLH 447 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV------------------- 267 T AA V RL D L LR VL+Q+L Sbjct: 448 TNSAAATVTRLRDMGLED------YLLTAVLRGVLAQRLVRVLCPACKTSTPAPSALIER 501 Query: 268 --------------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHV 301 GR+A+ E L A+ LI Sbjct: 502 FRLDEHAPAGQTPHLWHPVGCPACRQTGYRGRMAVAEFLEPDAAIDRLIYARAGEAEIEE 561 Query: 302 IQTGQQVGMITFQQSYQHRVGEG 324 M T ++ V G Sbjct: 562 AARAAG--MRTMFEAGLDAVLAG 582 >UniRef50_C5B368 General secretion pathway protein E, ATPase component n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B368_METEA Length = 577 Score = 368 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 100/375 (26%), Positives = 161/375 (42%), Gaps = 68/375 (18%) Query: 5 EIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDD-----DQ 56 +V + + + SD+HL + R+R+ G + A V+ L + Sbjct: 201 RLVRKAFELSASDIHLEAEEADMRVRYRVDGVLVEAERLAKSVQLALTTRIKILAGLNIA 260 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLP--SHCPQLEQLGAPT---- 110 L ++G++ A + +R S HG S+ LR+L LG Sbjct: 261 ERRLPQDGRMR-APDRGQEVDIRVSTLPTAHGESVVLRVLDGSRRIEDFASLGFDAPAIA 319 Query: 111 VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLI 170 + + NGL+LVTG TGSGK+TTL A + + ++T+EDPVEY A + Sbjct: 320 RIEAMTNRPNGLVLVTGPTGSGKTTTLYAALRRI-SGPHLKVVTVEDPVEYRMAGVNQVQ 378 Query: 171 QQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGA 230 IGL FA+ LR+ LR+DPDV+++GE+RD+ET R+A+ A+ TGHLV++TLHT A Sbjct: 379 AHPGIGLD---FAAALRSILRQDPDVVMVGEIRDAETARIAVQASLTGHLVVSTLHTNSA 435 Query: 231 AQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD---------------------- 268 V RL+D +A +L V++Q+L Sbjct: 436 PATVTRLMDMGVE------PYLIAATLIGVVAQRLVRRLCAACAVPEPADDQERLRLGVA 489 Query: 269 -------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVG 309 GR+ + E++ + LI + Q + + G Sbjct: 490 PGTPLRLKRACGCAACNGTGYRGRMVVSEIMPLDADLRGLIADVAGEQAIAA--SARAAG 547 Query: 310 MITFQQSYQHRVGEG 324 M++ ++ + RV G Sbjct: 548 MVSLVETGRARVIAG 562 >UniRef50_D2R473 Type II secretion system protein E n=6 Tax=Planctomycetaceae RepID=D2R473_9PLAN Length = 572 Score = 368 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 163/379 (43%), Gaps = 70/379 (18%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + ++ L++K + SD+H + R + G + + + + D Sbjct: 192 LNMVLLLAIKDHASDIHFEPFEDEFRIRIKADGVLFEMVPPPRHLAFAITTRIKVMANLD 251 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP--- 109 + ++G+++ +V + LR S G S+ +R+L L ++G Sbjct: 252 IAERRMPQDGRIELSVG-GHSVDLRVSILPTLFGESVVMRVLDRSVVSLNLAKVGMDAPT 310 Query: 110 -TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 + +L NG++LVTG TGSGK+TTL + + LN D ++T EDPVEY Sbjct: 311 LKLFRSVLDRPNGIVLVTGPTGSGKTTTLYSALSELNSVED-KLITTEDPVEYDIDGIVQ 369 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + EIG+ TFA+ LRA LR+DPD+IL+GE+RD ET +A+ A+ TGH+V +TLHT Sbjct: 370 IPIDHEIGV---TFAACLRAILRQDPDIILVGEIRDLETAEIAVQASLTGHMVFSTLHTN 426 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A V RL D + ++ A+L+Q+L Sbjct: 427 DAPSTVTRLKDMGVPT------FLITATVEAILAQRLVRRICSQCREEVEGSEELLAEVK 480 Query: 269 -----------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 +GRV LFEL+I + +++ + + + + T Sbjct: 481 YTAEQLAGKKFYRGRGCDVCNNTGYKGRVGLFELMIMNDTLRDMVMQNAS--IDDLRTTA 538 Query: 306 QQVGMITFQQSYQHRVGEG 324 GM T + +G Sbjct: 539 SSFGMSTLRDVGMRNAFDG 557 >UniRef50_B1ZN20 Twitching motility protein n=3 Tax=Verrucomicrobia RepID=B1ZN20_OPITP Length = 367 Score = 368 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 122/331 (36%), Positives = 196/331 (59%), Gaps = 7/331 (2%) Query: 3 MEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDT---PDVEELLREWLDDDQRAI 59 + +++ L+V VSD+ + + P R+ GR++ D P+ + + E + + R Sbjct: 11 INDLLKLAVDSGVSDVIIKANKPGYVRLAGRLKPVEMDPITSPEAQAFVDEHVPEVFRQK 70 Query: 60 LLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGA---PTVLPELL 116 +GQ+DFA ++ R R +AF QR +S+ +R + S P QLG L L+ Sbjct: 71 WEASGQIDFAYAVESIGRFRVNAFHQRGLVSIVMRHIKSTVPTFAQLGLDFASEALVRLV 130 Query: 117 KSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIG 176 ++++G++LV GATGSGKS+T+AAM+ ++NQ+ D HI+T+EDP+EY + ++ L QQREIG Sbjct: 131 QAKDGILLVCGATGSGKSSTMAAMLNWVNQNMDKHIVTIEDPIEYTFQDEKSLFQQREIG 190 Query: 177 LHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVER 236 L +F ++A LR++PDVIL+GE+RD ET A++AAETGHLV +T+H AQ++ R Sbjct: 191 LDVSSFDEAIKAVLRQNPDVILIGEMRDRETFETAISAAETGHLVFSTMHAATVAQSLTR 250 Query: 237 LVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDK-QEGRVALFELLINTPAVGNLIREGKT 295 L + FP +E+ R +AGSLR + QKL GRV E+L V NLI EG+ Sbjct: 251 LFEFFPPEEQIQARRAIAGSLRGFICQKLIPALEGGGRVVTNEILTADAVVKNLILEGQF 310 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ +++ +F + + G++ Sbjct: 311 EKIQGILEGSGDSNSYSFNKDLYRLIKAGKI 341 >UniRef50_Q1V0G6 Type II Secretion System PilB n=4 Tax=root RepID=Q1V0G6_PELUB Length = 583 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 97/381 (25%), Positives = 160/381 (41%), Gaps = 74/381 (19%) Query: 5 EIVALSVKHNVSDLHLCSA---WPARWRIRGRMEAAPFDTPDVEE---LLREWLD----- 53 +VA ++K VSD+H+ R+R+ G ++ + + + Sbjct: 202 AVVADAIKMGVSDIHIEPYRFSSRVRYRLDGMLQEQETYRQFLHDNYGAVVTRFKIMGKL 261 Query: 54 DDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAP-- 109 D L ++G ++F + + LR S + + +R+L LEQL Sbjct: 262 DIAERRLPQDGAINFKIG-NKVVDLRLSILPTANNERIVMRILNKDAGDITLEQLNFEKQ 320 Query: 110 --TVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 L + + GLILVTG TGSGKSTTL +++ + +ILT EDPVEY Sbjct: 321 DLESLRKGIHGSQGLILVTGPTGSGKSTTLYSILKEV-SKPHLNILTAEDPVEYELDGVG 379 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 + + +IG TFA LR+ LR+DP++IL+GE+RD ET+ + L AA TGHLV +TLHT Sbjct: 380 QVQIKDDIGF---TFAKALRSFLRQDPEIILVGEMRDKETVDIGLKAALTGHLVFSTLHT 436 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD------------------- 268 A + RL + ++ + + V++Q+L Sbjct: 437 NDAPSTITRLQNMGTPD------YLISAACQLVVAQRLARKNCKDCRVPDDDVNPKVLKD 490 Query: 269 -------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQ 303 +GR ++E+L+ + + I + T P + + Sbjct: 491 MGFSDEDASKVKAIKGKGCAKCSDSGYKGRQGIYEILVVSKPIKEAILKQATT--PELRE 548 Query: 304 TGQQVGMITFQQSYQHRVGEG 324 + G T Q + + G Sbjct: 549 IAIKEGFRTMQDMGRRMIASG 569 >UniRef50_C2LMJ4 Tfp pilus assembly protein PilT n=2 Tax=Proteus mirabilis RepID=C2LMJ4_PROMI Length = 339 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 168/330 (50%), Positives = 221/330 (66%), Gaps = 5/330 (1%) Query: 1 MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA----PFDTPDVEELLREWLDDDQ 56 MNME+++ SVKHN SDLHLC R RI G + P + + + + +L Q Sbjct: 1 MNMEKLIIYSVKHNASDLHLCCGDVPRLRINGVLYQQNQCKPITSDTLLKWITPYLTTAQ 60 Query: 57 RAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELL 116 + GQ+D A++LAE QRLR + F Q+ GIS LR++ S P L L P + LL Sbjct: 61 LQFFGKEGQVDTAITLAEGQRLRVNLFRQQLGISAVLRVINSQLPALTSLRVPKSITALL 120 Query: 117 KS-ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREI 175 + NGLILVTGATGSGKS+TLAAM+ YLNQH HILTLE P+E++Y +++ +IQQREI Sbjct: 121 DNVSNGLILVTGATGSGKSSTLAAMIDYLNQHKRQHILTLEAPIEFIYTNKQSIIQQREI 180 Query: 176 GLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVE 235 G AS + AALR+DPDVI+LGELRD E+I++AL AAETGHLVLATLHT+G Q +E Sbjct: 181 GRDVQNIASAIEAALRQDPDVIMLGELRDLESIKMALIAAETGHLVLATLHTQGVVQTLE 240 Query: 236 RLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKT 295 R+ + F + E+ + QLAGSL+A++SQ+L Q GRVALFE++ T + +LIREGK Sbjct: 241 RVTNVFSSNERQWISAQLAGSLKAIISQQLVPATQGGRVALFEVMYMTQGIAHLIREGKY 300 Query: 296 HQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 HQ+ ++QTG + GM TF S Q R EG Sbjct: 301 HQVTTLMQTGFEYGMQTFTLSRQQRQYEGL 330 >UniRef50_A1TQ20 Twitching motility protein n=3 Tax=Comamonadaceae RepID=A1TQ20_ACIAC Length = 387 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 119/328 (36%), Positives = 181/328 (55%), Gaps = 3/328 (0%) Query: 2 NMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAA---PFDTPDVEELLREWLDDDQRA 58 ME I+ L + SD++L + P +I G + LL E + D+ Sbjct: 3 TMERILRLMAEKRASDVYLSANAPVLIKINGECVPVNSQLLPFDAPKNLLAEIVPPDRIE 62 Query: 59 ILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKS 118 L E G+L+ V L R R SA QR ++ +R + H P+L L P +L EL+ Sbjct: 63 ELEETGELNMGVPLTGVGRFRVSAMRQRGSYAVVVRFIAQHIPELPSLNLPPILGELILE 122 Query: 119 ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLH 178 + GL+LV GATGSGKSTTLA+M+ N HILT+EDPVEY + +++ ++ QREIG Sbjct: 123 KRGLLLVVGATGSGKSTTLASMIDSRNAQLTGHILTVEDPVEYQFKNKKSIVNQREIGSD 182 Query: 179 CMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLV 238 + + L+ ALR+ PDVIL+GE+RD ET+ A+ A++GHL LATLH + A+ R++ Sbjct: 183 TQSLQTALKNALRQAPDVILIGEIRDRETMSAAIAYAQSGHLCLATLHGNNSYHALNRIL 242 Query: 239 DSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQL 298 +P + + + LA +L+A++SQ+L R+ E+L+NT VG +I +G + Sbjct: 243 SFYPVEVRPTMLGDLASALKAIVSQRLVRSPTGERLPAVEVLLNTKLVGEMIEQGNFSGV 302 Query: 299 PHVIQTGQQVGMITFQQSYQHRVGEGRL 326 ++ G TF+ V EGR+ Sbjct: 303 REAMEKSMAEGSQTFEHDLARLVVEGRI 330 >UniRef50_C8W151 Type II secretion system protein E n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W151_DESAS Length = 545 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 114/379 (30%), Positives = 158/379 (41%), Gaps = 68/379 (17%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 +E ++ +V SDLHL R R+ G ++ V L+ + Sbjct: 166 LEGLIIKAVAQRASDLHLEPLSDGLRVRMRVDGMLKTVDRMPASVAPLIISRTKVLCNMN 225 Query: 55 DQRAILLENGQLDFAV-SLAENQRLRGSAFAQRHGISLALRLLPSH--CPQLEQLGAPTV 111 ++G F+ ++ +R S G LR LPS +E LG Sbjct: 226 IADKRSPQDGGFVFSQNGSGDSINVRVSTLPCAKGEKAVLRFLPSQDRLLGIEDLGMEED 285 Query: 112 ----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQR 167 LL +GLILVTG TGSGK+ TL A + YL ++ T+EDP+E Sbjct: 286 AQESFRSLLDLPHGLILVTGPTGSGKTNTLYAALKYLRSDG-VNVTTIEDPIELQMEGIT 344 Query: 168 CLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHT 227 Q + +TF+S LRA LR+DPD+I++GE+RD ET LAL AA TGHLVL+TLHT Sbjct: 345 QT--QADYSSKKLTFSSALRAILRQDPDIIMVGEIRDGETAGLALQAALTGHLVLSTLHT 402 Query: 228 RGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV-------------------- 267 AA AVERLVD R + SLRAVL+Q+L Sbjct: 403 NDAASAVERLVDMGCE------RYLVNSSLRAVLAQRLVRVICPKCRRKYAATSDELSAL 456 Query: 268 ---------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQ 306 GR+ +FELL + LI G I+ Sbjct: 457 GLDPGHGEEFYSGRGCTYCQGTGYRGRIGIFELLSLDQEMQKLISGGAD---TVAIKEQS 513 Query: 307 QVGMITFQQSYQHRVGEGR 325 + M T ++ ++ G Sbjct: 514 RDKMRTLREDGIIKLRRGV 532 >UniRef50_B1ZZ61 Type II secretion system protein E n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZ61_OPITP Length = 568 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 99/381 (25%), Positives = 164/381 (43%), Gaps = 71/381 (18%) Query: 3 MEEIVALSVKHNVSDLHLCSAW---PARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 ++EI+ +++ +D+H+ + R+RI G + + + + L Sbjct: 185 LDEIIYFALRERATDIHIEAQETQSRIRFRIDGNLREILTYSRKLHRAVVSRLKILCGLN 244 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL----PSHCPQLEQLGAPT 110 + ++G+ + +++ R S +G +R+L L+++ Sbjct: 245 ISESRFPQDGRFSMPIG-SQSANFRVSTIPSAYGEKAVVRILALTGKKSMLTLDKMMISQ 303 Query: 111 V----LPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQ 166 L+++ NG+I VTG TGSGK+TTL A + +N D +I T+EDP+E Sbjct: 304 TVLQPFKRLIQNPNGIIFVTGPTGSGKTTTLYAALHEINS-PDLNISTIEDPIEIQLPGV 362 Query: 167 RCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLH 226 I L FA+ LRA +R+DPD IL+GE+RD ET ++A AA TGH+V ATLH Sbjct: 363 TQTQVNAHIDLK---FATILRALMRQDPDAILIGEIRDLETAKIATEAALTGHIVFATLH 419 Query: 227 TRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKL--------------------- 265 T AAQA+ RL++ +A ++ VL+Q+L Sbjct: 420 TNTAAQAIVRLIEIGVE------PYMVAPTVIGVLAQRLAARICDNCKEAYYPTRDVLRR 473 Query: 266 ---------EV------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQT 304 +GRVA EL++ T + LI EGK+ Q + + Sbjct: 474 YFADEGLTDVPFYRGRGCTACRGTGYKGRVAFHELVLITEEIRTLIAEGKSAQ--EITRA 531 Query: 305 GQQVGMITFQQSYQHRVGEGR 325 +VG + +V G Sbjct: 532 AAKVGYKPLRYDGLKKVLLGL 552 >UniRef50_C1AA14 Type IV pilus assembly protein PilB n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA14_GEMAT Length = 634 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 85/284 (29%), Positives = 137/284 (48%), Gaps = 25/284 (8%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLDD----- 54 + I+ +V SD+H R+RI G ++ + L Sbjct: 221 INAILGDAVHKGASDIHFECFEHELRVRYRIDGALQEVMKPPMKMRAALISRFKIMSSLN 280 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLE--QLGAPT-- 110 + ++G++ + + R S G + LR+L LE + G Sbjct: 281 IAERRVPQDGRIKLKIGR-KVIDFRVSTLPTLFGEKVVLRILDKGNLTLELDKFGIEPRA 339 Query: 111 --VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L E + + G++LVTG TGSGK+TTL + + +N + D +I+T EDPVEY Sbjct: 340 ERELMEAISNPYGMVLVTGPTGSGKTTTLYSALSKIN-NLDTNIMTAEDPVEYNLFGINQ 398 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + + EIG M+FA+ L+A LR+DP+VI++GE+RD ET +A+ AA TGH+V++TLHT Sbjct: 399 VQVRTEIG---MSFAAALKAFLRQDPNVIMVGEIRDLETGGIAVKAALTGHMVMSTLHTN 455 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEG 272 A + + RL+D +A +L +L+Q+L Sbjct: 456 SAPETIVRLLDMGLE------PFNVASALNLILAQRLVRRICPK 493 Score = 56.5 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 268 DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGR 325 +GR ++E++ TP + L+ + Q+ + + GM+T + +V +G Sbjct: 567 TGLKGRQGVYEVMFMTPTLKKLVMQNSDVQV--IRDAAVEEGMLTLRMDGWLKVLKGV 622 >UniRef50_Q31A47 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB-like protein n=2 Tax=Prochlorococcus marinus RepID=Q31A47_PROM9 Length = 594 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 91/383 (23%), Positives = 147/383 (38%), Gaps = 75/383 (19%) Query: 3 MEEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----D 54 + +++ N SD+H+ R+RI G +E + L D Sbjct: 203 VASLLSKCFSLNASDVHIEPLEDRLRIRYRIDGMLEEVFAFPRSHISPIVSRLKIMSNLD 262 Query: 55 DQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLL--PSHCPQLEQLGAPT-- 110 + ++G++ + R S + G + LR+L S L +L Sbjct: 263 IAEKRIPQDGRIRC-LLRGRKSDFRVSTLPGKWGEKVVLRVLESDSSVLNLSKLITEKSE 321 Query: 111 -VLPELLKS-ENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRC 168 L ++ G+++V G TGSGKSTTL +M+ LN +I T+EDPVEY Sbjct: 322 LDLIRIMSKTPYGIVVVVGPTGSGKSTTLYSMLSELNS-PGVNISTVEDPVEYTLDGIHQ 380 Query: 169 LIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTR 228 + RE GL F+ LR+ +R+DPD+IL+GE RD ET + A+ AA TGH+V TLH Sbjct: 381 VQVIREKGLD---FSRALRSLMRQDPDIILVGETRDKETAQAAMEAALTGHMVFTTLHAN 437 Query: 229 GAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVD-------------------- 268 A A+ RL + + S+ V++Q+L Sbjct: 438 DTATAITRLSEMNIP------PYLIGASIIGVVAQRLVRKVCLSCSSVKSLSKGKDDRAI 491 Query: 269 ----------------------------KQEGRVALFELLINTPAVGNLIREGKTHQLPH 300 +GRV ++E++ + LI + T + Sbjct: 492 KYGLNKARIINETSNDSKSRSCPVCGGSGYKGRVGIYEVMKINENLRELIMKESTADV-- 549 Query: 301 VIQTGQQVGMITFQQSYQHRVGE 323 + V + V + Sbjct: 550 IRSKAFLVEGRSLLDYGMELVKK 572 >UniRef50_Q82V45 Bacterial type II secretion system protein E n=1 Tax=Nitrosomonas europaea RepID=Q82V45_NITEU Length = 576 Score = 366 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 108/379 (28%), Positives = 165/379 (43%), Gaps = 71/379 (18%) Query: 4 EEIVALSVKHNVSDLHLCS---AWPARWRIRGRMEAAPFDTPDVEELLREWLD-----DD 55 +++ ++ SD+HL + R+RI G ++ + + L D Sbjct: 195 HQLLTQAMDAGASDVHLEPMTDSLVVRYRIDGVLQEVDVLSNRWSRSVVSRLKLMARLDI 254 Query: 56 QRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHC--PQLEQLGAPT--- 110 L ++G++ F + + LR + F HG S+ LRLL H P+LE LG Sbjct: 255 AERRLPQDGRIRFT-TRGVSLDLRVATFPTLHGESMVLRLLGQHSVSPELESLGLDPSGL 313 Query: 111 -VLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCL 169 L L +G++L+TG TGSGK+TTL A + + + + I+T+EDPVEY L Sbjct: 314 QALRAALDRPHGIVLITGPTGSGKTTTLYAALNAI-RSPERKIVTVEDPVEYTLPGVSQL 372 Query: 170 IQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRG 229 + EIGL T+ + LR+ LR DPDVI++GE+RD ET +A+ +A TGHLVLATLHT Sbjct: 373 QVKPEIGL---TYGAALRSVLRNDPDVIMIGEIRDQETADIAIRSALTGHLVLATLHTNT 429 Query: 230 AAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEV---------------------- 267 AA A+ RL+D LA +L +Q+L Sbjct: 430 AAGAITRLLDLGVED------YLLASTLVFAGAQRLVRRICPECCTTREPTGDERHALAS 483 Query: 268 ----------------------DKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTG 305 GR+ +FE L IR+ ++ ++ Sbjct: 484 VSGHKAETCQLPVAMGCPACRGRGYTGRLPIFEALPIGLEEQAAIRQPHAEEV--LLGIT 541 Query: 306 QQVGMITFQQSYQHRVGEG 324 ++ T RV +G Sbjct: 542 RRKNTPTLWSHGLDRVIQG 560 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.193 0.680 Lambda K H 0.267 0.0592 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,608,733,333 Number of Sequences: 3077464 Number of extensions: 150929546 Number of successful extensions: 528043 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2112 Number of HSP's successfully gapped in prelim test: 1408 Number of HSP's that attempted gapping in prelim test: 514478 Number of HSP's gapped (non-prelim): 4683 length of query: 326 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 197 effective length of database: 643,403,500 effective search space: 126750489500 effective search space used: 126750489500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 94 (40.3 bits)