29 c1vmaA_ Probab=97.97   E-value=4.4e-05  Score=48.45  Aligned_columns=124  Identities=17%

Q ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECC-----CCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH--
Q ss_conf             4787499972688636689999999610258847999857-----310025997279980418887879899999987--
Q batch____       118 SENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLED-----PVEYLYASQRCLIQQREIGLHCMTFASGLRAAL--  190 (326)
Q Consensus       118 ~~~glili~G~tGSGKTTtl~all~~~~~~~~~~i~tiEd-----p~E~~~~~~~~~~~~~~~g~~~~~~~~~l~~~L--  190 (326)
                      .+...++++||||+|||||+..|..++........+.--|     -+|..-......-+.........+....++.++  
T Consensus        90 ~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~  169 (294)
T c1vmaA_          90 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAH  169 (294)
T ss_dssp             SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHH
T ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH
T ss_conf             89669999806887602489999999996799489997587686479999999976198289748836989999999999


Q ss_pred             --HCCCCEEEECCCC-------CHHHHHHHHHHHHC-----CCCEEEEEECCCHHHHHHHHHHHC
Q ss_conf             --2699899985889-------98899999999975-----992599971599899999999622
Q batch____       191 --REDPDVILLGELR-------DSETIRLALTAAET-----GHLVLATLHTRGAAQAVERLVDSF  241 (326)
Q Consensus       191 --R~~PD~I~iGEiR-------d~eta~~a~~aa~t-----Ghlv~tTiHA~sa~~ai~Rl~~~~  241 (326)
                        ..+-|+|+|+-..       .-+.+....+....     -+.++-.+-|....+++......+
T Consensus       170 ~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~  234 (294)
T c1vmaA_         170 ALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFK  234 (294)
T ss_dssp             HHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred             HHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHH
T ss_conf             99779989998188898785799999999999963035668853999811468789999999996