17/01/2012 11:14:44 : INFO  : Run start: Tue Jan 17 11:14:44 GMT 2012
17/01/2012 11:14:44 : INFO  : Initialised job
17/01/2012 11:14:44 : INFO  : Renaming log file 'phyre2_20120117_111443.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ac3929887efe5264/phyre_20120117_111443.log'
17/01/2012 11:14:44 : INFO  : Initialised job:
Sequence
>batch____
MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGAT
LLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFK
ADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAH
VCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG

17/01/2012 11:14:44 : INFO  : Checked sequence
17/01/2012 11:14:44 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 11:14:44 : INFO  : PSI-BLAST 3 iterations
17/01/2012 11:16:15 : INFO  : PSI-BLAST 5 iterations
17/01/2012 11:17:44 : INFO  : Finished PSI-BLAST
17/01/2012 11:17:44 : INFO  : Running Buildali to generate a3m file
17/01/2012 11:24:56 : INFO  : Converting to HMM
17/01/2012 11:24:58 : INFO  : Calibrating HMM
17/01/2012 11:25:04 : INFO  : Searching HMM database
17/01/2012 11:29:48 : INFO  : Finished buildali
17/01/2012 11:29:48 : INFO  : Predicting secondary structure
17/01/2012 11:29:49 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 11:29:49 : INFO  : Predicting Disordered regions
17/01/2012 11:29:49 : INFO  : Predicted Disorder (Disopred)
17/01/2012 11:29:49 : INFO  : Running memsat_svm check
17/01/2012 11:30:36 : INFO  : Globular protein
17/01/2012 11:30:36 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ac3929887efe5264'
17/01/2012 11:30:36 : INFO  : Initialising fold library search
17/01/2012 11:30:36 : INFO  : Initialised search input
17/01/2012 11:30:36 : INFO  : Building Ensemble models
17/01/2012 11:30:36 : INFO  : Building hh.d1jysa_.model.1.pdb
17/01/2012 11:30:37 : INFO  : Building c3bl6A_.1.pdb
17/01/2012 11:30:37 : INFO  : Building c1zosE_.2.pdb
17/01/2012 11:30:38 : INFO  : Building d1jysa_.3.pdb
17/01/2012 11:30:38 : INFO  : Building c3eeiA_.4.pdb
17/01/2012 11:30:38 : INFO  : Building c3dp9A_.5.pdb
17/01/2012 11:30:39 : INFO  : Building c3nm5B_.6.pdb
17/01/2012 11:30:39 : INFO  : Building c2h8gA_.7.pdb
17/01/2012 11:30:39 : INFO  : Building c3bsfB_.8.pdb
17/01/2012 11:30:40 : INFO  : Building c1z34A_.9.pdb
17/01/2012 11:30:40 : INFO  : Building d1rxya_.10.pdb
17/01/2012 11:30:41 : INFO  : Building d1je0a_.11.pdb
17/01/2012 11:30:41 : INFO  : Building d1vhwa_.12.pdb
17/01/2012 11:30:42 : INFO  : Building c1nw4C_.13.pdb
17/01/2012 11:30:42 : INFO  : Building d1odka_.14.pdb
17/01/2012 11:30:43 : INFO  : Building d1q1ga_.15.pdb
17/01/2012 11:30:43 : INFO  : Building d2ac7a1.16.pdb
17/01/2012 11:30:44 : INFO  : Building d1k9sa_.17.pdb
17/01/2012 11:30:45 : INFO  : Building c3mb8A_.18.pdb
17/01/2012 11:30:45 : INFO  : Building c3tl6B_.19.pdb
17/01/2012 11:30:46 : INFO  : Building c3qpbB_.20.pdb
17/01/2012 11:30:48 : INFO  : Finished HH model building
17/01/2012 11:30:48 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 11:30:51 : INFO  : html domain output complete ID 'ac3929887efe5264'
17/01/2012 12:05:01 : INFO  : Run end  : Tue Jan 17 12:05:01 GMT 2012
