BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (188 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P10514 Protein traE n=48 Tax=root RepID=TRAE2_ECOLX 383 e-105 UniRef50_P12057 Protein traE n=8 Tax=Gammaproteobacteria RepID=T... 175 7e-43 UniRef50_B6ICF2 TraE protein n=1 Tax=Escherichia coli SE11 RepID... 143 3e-33 UniRef50_Q2NQ47 Putative TraE n=1 Tax=Sodalis glossinidius str. ... 129 5e-29 UniRef50_A4WGS2 TraE family protein n=1 Tax=Enterobacter sp. 638... 92 7e-18 UniRef50_D2U003 Conjugal transfer pilus assembly protein TraE n=... 84 2e-15 UniRef50_B2VB07 TraE protein n=1 Tax=Erwinia tasmaniensis RepID=... 76 6e-13 UniRef50_A8QYP7 TraE protein n=2 Tax=Legionellaceae RepID=A8QYP7... 75 2e-12 UniRef50_C8QE98 TraE family protein n=2 Tax=Pantoea sp. At-9b Re... 72 8e-12 UniRef50_A9L6K5 Type IV conjugative transfer system protein TraE... 72 1e-11 UniRef50_Q7MBN7 Putative conjugative transfer protein TraE n=4 T... 71 2e-11 UniRef50_B6ESX5 Conjugative transfer protein TraE n=2 Tax=Vibrio... 65 2e-09 UniRef50_Q1MXI2 Plasmid-like conjugative transfer protein TraE n... 63 4e-09 UniRef50_Q8D6A3 Putative uncharacterized protein n=1 Tax=Vibrio ... 59 8e-08 UniRef50_UPI00016ACDC8 hypothetical protein Bpse38_32205 n=1 Tax... 58 1e-07 UniRef50_A1WDF9 Putative uncharacterized protein n=1 Tax=Acidovo... 58 1e-07 UniRef50_Q47DN0 Plasmid-like conjugative transfer protein TraE n... 57 3e-07 UniRef50_B4EQI4 Putative TraE conjugative transfer protein n=1 T... 55 8e-07 UniRef50_Q5ZTS0 Putative conjugative transfer protein TraE n=1 T... 55 1e-06 UniRef50_Q5WSC2 Putative uncharacterized protein n=2 Tax=Legione... 54 2e-06 UniRef50_A1AKM2 Conserved hypothetical sex pilus assembly and sy... 54 3e-06 UniRef50_Q2LTZ4 Hypothetical sex pilus assembly and synthesis pr... 52 1e-05 UniRef50_A5KZF3 Sex pilus assembly and synthesis protein TraE n=... 51 2e-05 UniRef50_C9NPU8 Putative conjugative transfer protein TraE n=1 T... 49 1e-04 UniRef50_B4RLS3 TraE n=10 Tax=Neisseria RepID=B4RLS3_NEIG2 48 1e-04 UniRef50_D0SGY9 Putative uncharacterized protein n=1 Tax=Acineto... 47 2e-04 UniRef50_A3VN26 Putative uncharacterized protein n=1 Tax=Parvula... 47 3e-04 UniRef50_C5SIK2 Putative uncharacterized protein n=1 Tax=Asticca... 47 4e-04 UniRef50_Q0F358 Plasmid-like conjugative transfer protein TraE n... 46 8e-04 UniRef50_Q1NGT9 Hypothetical sex pilus assembly and synthesis pr... 43 0.004 UniRef50_A7H3G4 Putative conjugative transfer protein TraE n=4 T... 43 0.006 UniRef50_A0B4M7 Putative uncharacterized protein n=3 Tax=Burkhol... 41 0.023 UniRef50_Q6MBA2 Putative F pilus assembly protein traE n=2 Tax=C... 40 0.037 UniRef50_A0R7R2 Conserved hypothetical sex pilus assembly and sy... 39 0.096 >UniRef50_P10514 Protein traE n=48 Tax=root RepID=TRAE2_ECOLX Length = 188 Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/188 (98%), Positives = 185/188 (98%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPM FN PFAV Sbjct: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMGFNVPFAV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK Sbjct: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 NDNVNSAFFQTSVRVWPQYGRVEI GVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF Sbjct: 121 NDNVNSAFFQTSVRVWPQYGRVEIHGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 Query: 181 GETDDEKK 188 GETDDEKK Sbjct: 181 GETDDEKK 188 >UniRef50_P12057 Protein traE n=8 Tax=Gammaproteobacteria RepID=TRAE1_SALTI Length = 187 Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 87/188 (46%), Positives = 127/188 (67%), Gaps = 2/188 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLI-VLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFA 59 ME AR S+++++A+ + ++ L+ +L +V + V N L +EQRT VTPM +NAPF Sbjct: 1 MEISARNSSTKIIAVIILSLTTLVFILGFAVAWL-AVTNRALIHEQRTVVTPMTYNAPFV 59 Query: 60 VSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRI 119 VS+ AD Y + M LSF+ALRLNVS ETVD++H L+ ++ P A+ + K +L EEA +I Sbjct: 60 VSETKADTEYFRMMTLSFLALRLNVSPETVDSNHAFLMSFVEPEAREEFKKVLQEEAAQI 119 Query: 120 KNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 K ++VNS F+ T + V+P GR+++RGVLK WIG+S+P T+IK Y L LK G T + Sbjct: 120 KANDVNSTFYTTEINVYPVDGRIDVRGVLKMWIGNSRPSTEIKTYRLRLKYTGGFTRIGR 179 Query: 180 FGETDDEK 187 F E +EK Sbjct: 180 FYEVTNEK 187 >UniRef50_B6ICF2 TraE protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF2_ECOSE Length = 192 Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/188 (43%), Positives = 117/188 (62%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ A S + ++ F+ + + LSLS NV+ + L+ Q+ PM FN PF++ Sbjct: 1 MDLSAHRSALKFTSLTFVILLFFLGLSLSANVLAWLRIEDLERGQKETYIPMFFNQPFSL 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+N ADASYLQQ+A S + LRLNV+ E++ A HQALL+Y A+ QMK IL EA +I Sbjct: 61 SRNVADASYLQQVAESLMFLRLNVTPESIKAQHQALLRYFDTAARPQMKAILDAEASQII 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +NV+SAF+ T + V+PQ G V+ RG LKTWIG + + K Y L L +G+T + +F Sbjct: 121 TNNVSSAFYMTGIDVYPQAGVVDFRGTLKTWIGKREALPEEKAYRLELGYRDGMTTIRSF 180 Query: 181 GETDDEKK 188 E +EK+ Sbjct: 181 KELVNEKE 188 >UniRef50_Q2NQ47 Putative TraE n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NQ47_SODGM Length = 118 Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 59/120 (49%), Positives = 89/120 (74%), Gaps = 2/120 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+H ARL++++++A++ + + + LS++ NVI + YRLQ +++ V PM F APFA+ Sbjct: 1 MKHAARLNSNKIIALSLVLLDAFLFLSVTANVILAITYYRLQGDRQVVVVPMLFKAPFAL 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+NS DASYL+QMALSF+ALRLNV+ ETV+ASHQ LL ++P AQ +K LA +R++ Sbjct: 61 SENSMDASYLEQMALSFVALRLNVTPETVEASHQFLLSMVKPSAQKSLK--LAWRKRRVR 118 >UniRef50_A4WGS2 TraE family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS2_ENT38 Length = 193 Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 95/186 (51%), Gaps = 5/186 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 ME + + ++ AFI + L+VLS + NV+ G + Q+T TPM +N PF Sbjct: 1 MELKIKGERDKQLSYAFIGLVSLLVLSGTGNVLTGSLAWYFATTQKTVTTPMTYNQPFTS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 SADAS + A SFI RLNVS E +D + + LL ++ ++ ++ L EA+RIK Sbjct: 61 DAVSADASGMTMFASSFIYWRLNVSPENIDNNQKMLLGFVPSTERDLLRKALDVEAERIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGD---SKPFTD-IKHYILILKRENGVTW 176 + + F +RV G VE G LK+ + + P D K Y L + +NG+ Sbjct: 121 KGGITTRFDTKDIRVMTD-GSVEFSGTLKSATTNGAITTPLKDQDKTYRLNISYQNGLVN 179 Query: 177 LDNFGE 182 L +F E Sbjct: 180 LHSFEE 185 >UniRef50_D2U003 Conjugal transfer pilus assembly protein TraE n=1 Tax=Arsenophonus nasoniae RepID=D2U003_9ENTR Length = 172 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 75/143 (52%) Query: 40 RLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQY 99 +L N +T + PM + F+ DA YL+ M LS + LRLNVS++T+ SH LL Y Sbjct: 27 QLINNHQTIIIPMVDHEGFSFYGTRGDARYLRLMGLSLLNLRLNVSAQTIKDSHNLLLAY 86 Query: 100 IRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFT 159 + ++ +LAEE +R+ + +S F+ V+V P G V+I G L + G Sbjct: 87 SDTHLREKLIEVLAEERQRMAINEASSTFYLKEVKVSPDSGVVDITGELHFFYGIKAVEP 146 Query: 160 DIKHYILILKRENGVTWLDNFGE 182 KHY L L+ +G L +F E Sbjct: 147 VDKHYRLRLETRDGALKLTDFVE 169 >UniRef50_B2VB07 TraE protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB07_ERWT9 Length = 188 Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 6/183 (3%) Query: 6 RLSTSRVM----AIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVS 61 +LST + + A+AF+ M+ L+ SL +V ++ N Q PM F+ PF S Sbjct: 2 KLSTKKDIDKRTAVAFLAMAGLLSASLLTSVGAIGLAWKFHNTQERITVPMGFDKPFVSS 61 Query: 62 QNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKN 121 DA+ + + ++LRLNV+ ET+D + LL Y + ++K L EA I Sbjct: 62 NQRGDANLNSMLVRALVSLRLNVTPETIDPQQKELLSYTDSENRAELKRALEVEADYIHK 121 Query: 122 DNVNSAFFQTSVRVWPQYGRVEIRG--VLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 ++V++ F P+ E+ G + T G K KHYI+ + NG+ L+ Sbjct: 122 NDVSAQFLIEKFDYNPETNDTEVAGQQLASTSGGKLKLPDSSKHYIVNVSYVNGMVKLNK 181 Query: 180 FGE 182 F E Sbjct: 182 FTE 184 >UniRef50_A8QYP7 TraE protein n=2 Tax=Legionellaceae RepID=A8QYP7_9GAMM Length = 189 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/154 (32%), Positives = 75/154 (48%) Query: 13 MAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQ 72 ++ F M VL+ L NV+ + N VTP + N + S D YL Sbjct: 13 LSARFNLMVVLVFGLLVSNVLLSCFLNKAWNHHTIEVTPFSGNPGYFKSATRVDGHYLSL 72 Query: 73 MALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTS 132 MA +F+ RLNV+ ETVDA+H+ LL ++ Q+ +L EAK IK ++S F T Sbjct: 73 MAENFVNERLNVTPETVDANHKRLLSFVNHQKYTQILRLLTNEAKVIKAKKMSSTFDITE 132 Query: 133 VRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYIL 166 ++ P + GVLK ++G + K Y+L Sbjct: 133 IKTNPNQLTAVVSGVLKRYVGLQSLSDERKTYLL 166 >UniRef50_C8QE98 TraE family protein n=2 Tax=Pantoea sp. At-9b RepID=C8QE98_9ENTR Length = 199 Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 71/128 (55%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M + R +RV +A + L+ LSL+ N I G + Q+T PM F+ PF Sbjct: 1 MRYKVREGRNRVTVLALAGLGSLLALSLAANGITGALAWHFARTQKTITVPMLFDRPFVS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 + S D + + SFI LRL+V+ ETVD+ H ALL+++ P ++ MK LA EA+ I+ Sbjct: 61 TAASGDDALNGLLVRSFINLRLSVTPETVDSQHAALLRFVPPEDRDAMKKQLAAEAEYIR 120 Query: 121 NDNVNSAF 128 + V+S F Sbjct: 121 KNGVSSVF 128 >UniRef50_A9L6K5 Type IV conjugative transfer system protein TraE n=6 Tax=Shewanella baltica RepID=A9L6K5_SHEB9 Length = 188 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 1/131 (0%) Query: 43 NEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRP 102 N+ RT V P +A F VS S D YLQQM+ F L+LNV+ +VD ++ L YI Sbjct: 44 NKSRTVVPP-TISAAFTVSDTSIDEPYLQQMSEYFAFLKLNVTPASVDHQYKQLASYIDE 102 Query: 103 GAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIK 162 + M+ +L +EA IK N++S F ++ +V V+I G L ++G+ + Sbjct: 103 ADWHVMQPLLVDEAAMIKKQNISSHFTISTSQVALDDRLVKITGTLNKYVGNRALEPETI 162 Query: 163 HYILILKRENG 173 YI+ + ++G Sbjct: 163 SYIIAMNYDHG 173 >UniRef50_Q7MBN7 Putative conjugative transfer protein TraE n=4 Tax=Vibrionales RepID=Q7MBN7_VIBVY Length = 200 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 5/166 (3%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F+++LI N++ G +Y+ Q + P + F VS + D YL+QMA + Sbjct: 33 FLAMLIT-----NLVLGYTSYQALTHQSRTLIPPTISKAFTVSDGAVDEPYLEQMADYLL 87 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQ 138 L+LNV+ V LL+Y+ + N ++ L EA IK DN++S F S+R+ Sbjct: 88 YLKLNVTPANVSRQFGQLLEYVDAQSWNSVQPKLLREATVIKKDNISSQFSVDSIRISLD 147 Query: 139 YGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETD 184 +V++ G L+ ++G ++K Y + E G L + E + Sbjct: 148 TLQVQLYGKLQKYVGRRALEPEMKWYQVSFSYEQGSIGLLSIEEVE 193 >UniRef50_B6ESX5 Conjugative transfer protein TraE n=2 Tax=Vibrionaceae RepID=B6ESX5_ALISL Length = 186 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 2/150 (1%) Query: 25 VLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNV 84 VLSL V++ + L N + + P + + F VS + D SY QMA + L+LNV Sbjct: 25 VLSLVVSITLALGLLSLANNKSRTLVPPSISKAFTVSDGTIDESYASQMAEYILYLKLNV 84 Query: 85 SSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEI 144 + V+ LL Y A + ++ L E+ IK N++S F + V V V + Sbjct: 85 TPANVERQFSQLLDYANADAWSSVQPQLVRESVLIKKSNLSSTFSVSRVEVAMDSLIVNV 144 Query: 145 RGVLKTWIGDSKPFTDIK-HYILILKRENG 173 GVL +GD + T + Y++ LK E G Sbjct: 145 HGVLNKSVGD-RALTPVSCSYLIYLKYEQG 173 >UniRef50_Q1MXI2 Plasmid-like conjugative transfer protein TraE n=1 Tax=Bermanella marisrubri RepID=Q1MXI2_9GAMM Length = 194 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 72/141 (51%), Gaps = 2/141 (1%) Query: 13 MAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQ 72 M ++ +F + L L + NV+ ++T + P+ F + F V D YL+Q Sbjct: 13 MNVSRLFWASLSSLLIVSNVLLAYFVVTADTSEKTTLVPIGFESEFWVHNEEVDPEYLEQ 72 Query: 73 MALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTS 132 M+L F+ L + V++ + +L+Y+ P A ++ EA+RI+N +++S F ++ Sbjct: 73 MSLFFLDLYTDYHPSNVESRFKMILKYVEPSAHGLLERRFDSEAQRIRNSSLSSTFHPSA 132 Query: 133 VRVWPQYGRVEIRGVLKTWIG 153 +++ + V + G+L+ + Sbjct: 133 IKI--RETTVFVHGILQGLVA 151 >UniRef50_Q8D6A3 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D6A3_VIBVU Length = 189 Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 19/185 (10%) Query: 2 EHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVS 61 G L+ S+++ +F S+ VNV+ G++ + +E+ + P + F +S Sbjct: 5 HQGNLLALSKLLNFLLVFG---FAASMLVNVVLGLSLAKTLSEKSRTLVPPTISQAFTIS 61 Query: 62 QNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKN 121 + DA YLQ M F+ L+LNV+ V + LL Y+ + ++ +L ++A+ +K Sbjct: 62 DTAIDAPYLQLMGEYFLKLKLNVTPANVFRQYGLLLDYVPTENWSTIQPVLVKDAEHLKK 121 Query: 122 DNVNSAFFQTSVRVWPQYGRVEIR---------GVLKTWIGDSKPFTDIKHYILILKREN 172 N S F P GR EI G L +GD +++ Y + + N Sbjct: 122 YNTTSRF-----DALP--GRTEISIENRQFKQTGHLTKTVGDRTLPSELVTYTVQMDYSN 174 Query: 173 GVTWL 177 GV L Sbjct: 175 GVIEL 179 >UniRef50_UPI00016ACDC8 hypothetical protein Bpse38_32205 n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDC8 Length = 196 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Query: 47 TAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQN 106 T + P P+ + AD YL M+ ++L L + ETVD ++ LL+ + P Sbjct: 47 TRIVPPEVKRPYQIGAGQADQDYLSDMSGYVLSLILTSTPETVDYNNSILLKLVEPDQYP 106 Query: 107 QMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKH 163 K A RIK + + + + S +++ + RV +G LKT+IGD +P + + H Sbjct: 107 VYKTRFDAAAIRIKREKITTIWSPQSQQIFVEAKRVIWKGTLKTYIGD-QPVSTLPH 162 >UniRef50_A1WDF9 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WDF9_ACISJ Length = 197 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 52/108 (48%) Query: 47 TAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQN 106 T + P P+ + N A+ YL MA + L V+ ETVD +++ +L+ P Sbjct: 47 TKIVPPEVKRPYEIGSNYANKDYLLDMAGYVLGTVLTVTPETVDYNNKVILKMADPDGYA 106 Query: 107 QMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGD 154 +K L A R+K + V + + V Q RV++ G LKT+I D Sbjct: 107 GLKTALDAAAMRLKQERVTTIWVPRKEEVSEQDKRVKVSGKLKTFIAD 154 >UniRef50_Q47DN0 Plasmid-like conjugative transfer protein TraE n=5 Tax=Betaproteobacteria RepID=Q47DN0_DECAR Length = 188 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Query: 46 RTAVTPMAFNAPFAVSQNSADASYLQQMALSFIA-LRLNVSSETVDASHQALLQYIRPGA 104 RT V P + + F V+++ A YL+QM SFIA L L+V+ ++D + LL Y+ P Sbjct: 46 RTVVVPPSIDKTFWVTRDKASNEYLEQMG-SFIAWLVLDVTPASIDWKKEILLGYVEPEQ 104 Query: 105 QNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHY 164 +K EA+R+K N + F + + V IRG L+T + + D+K Y Sbjct: 105 YGPLKTRQEVEAERLKRINAATVFAPQQLVPSEEGQSVVIRGRLRTVVNGFETANDLKAY 164 >UniRef50_B4EQI4 Putative TraE conjugative transfer protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI4_BURCJ Length = 196 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 62/136 (45%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F+ + +V +L V+ + L T + P + + +A+ YL M+ + Sbjct: 19 FLKLCLVFTLGTIVLGLILVMFLVLRDPTRIVPPEIQHAYVIGSGTANGDYLSDMSDYVL 78 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQ 138 +L+ + ETVD ++ +L+ P A +K +L A RIK + + + F + + Sbjct: 79 SLQATTTPETVDHNNAVILKMTDPAAYPVIKTMLDAAAIRIKRERITTIFVMRTKSIDRP 138 Query: 139 YGRVEIRGVLKTWIGD 154 RV G KT+IGD Sbjct: 139 NNRVITTGTFKTYIGD 154 >UniRef50_Q5ZTS0 Putative conjugative transfer protein TraE n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS0_LEGPH Length = 187 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/161 (22%), Positives = 77/161 (47%), Gaps = 2/161 (1%) Query: 21 SVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIAL 80 SVL+ ++ ++ V + ++ T P + F +S YL+ M L Sbjct: 25 SVLLAMTFMQSITIVVLLHYAHSKHETHFIPPKISQEFTLSGTGVSEGYLRDMTNFLTQL 84 Query: 81 RLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYG 140 R N++S + ALL Y+ P ++ L +E ++I +++++S F+ ++ + ++ Sbjct: 85 RFNITSSSATYQFNALLGYVAPSLYGDIRAQLVKEVEQINHEHLSSVFYPSTFEIDIKHL 144 Query: 141 RVEIRGVLKTWIGDSKPFTDIKHYILI-LKRENGVTWLDNF 180 V++ G +K ++G + +D++ LI E G+ L N Sbjct: 145 SVKVMGQMKRFVG-ADLMSDVRETFLIRYSYEYGLLKLTNL 184 >UniRef50_Q5WSC2 Putative uncharacterized protein n=2 Tax=Legionella RepID=Q5WSC2_LEGPA Length = 185 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 13/159 (8%) Query: 20 MSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIA 79 ++V I+ L V+V+ N + T P+ + +S + SY++ M I Sbjct: 29 IAVFILGGLCVHVV---------NNKETHWLPICTEDGYFLSNSFFSPSYIKDMTKKVIQ 79 Query: 80 LRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQY 139 LRL + +TV A +L+ I Q K IL E+ +K N++S F++ + + Sbjct: 80 LRLTYNPDTVAARFASLVHLIPASHQEAFKTILDSESSVVKEKNISSVFYEKDIEIDEST 139 Query: 140 GRVEIRGVL-KTWIG-DSKPFTDIKHYILILKRENGVTW 176 + +++G+L +T G + KP + + Y++ NG+ W Sbjct: 140 LQAKVKGILNRTSHGLEVKPQSKV--YLVQFAHLNGMMW 176 >UniRef50_A1AKM2 Conserved hypothetical sex pilus assembly and synthesis protein n=2 Tax=Desulfuromonadales RepID=A1AKM2_PELPD Length = 192 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 1/165 (0%) Query: 9 TSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADAS 68 +S + A + V++VL ++V I + N QR + P A N+ ++S + A Sbjct: 10 SSNIFAENRLLKFVVVVLGIAV-AINTAGLFIALNSQRVILVPPAINSKISISGDKASEE 68 Query: 69 YLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAF 128 YL++ + L L + + LL P + L E A +I+N +SAF Sbjct: 69 YLKEFTRYILNLALTYNPVNARSQFSELLAVYDPAEFQATRKELYELADKIENTQASSAF 128 Query: 129 FQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENG 173 + S+ + R+E+ G KT++ D K K Y++ + ENG Sbjct: 129 YIHSIINDTEKRRLEVTGTKKTYMVDQKAEDTQKVYLIEYRFENG 173 >UniRef50_Q2LTZ4 Hypothetical sex pilus assembly and synthesis protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ4_SYNAS Length = 194 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 63/151 (41%) Query: 35 GVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQ 94 V YR N QRT + P + ++ + Y++ + AL + S TV Sbjct: 35 AVMTYRALNYQRTIIVPPVLKSRIEITGDRVSEEYVKAFSRYIAALSFSYSPGTVKPQFD 94 Query: 95 ALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGD 154 LL P A + K +L E A R+ V S FF + V + ++E+ G + ++ D Sbjct: 95 ELLALYAPEAFPEGKRVLYELADRVITTRVTSVFFMGKLYVDGEKNQIEVSGQRRQYVDD 154 Query: 155 SKPFTDIKHYILILKRENGVTWLDNFGETDD 185 K K Y++ + +G + E +D Sbjct: 155 RKVEDITKTYLIDYRISDGRFQVVRISEKED 185 >UniRef50_A5KZF3 Sex pilus assembly and synthesis protein TraE n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZF3_9GAMM Length = 186 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 8/163 (4%) Query: 2 EH-GARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 EH G L +R + ++ +V+++ +L V + + Q E+RT V P A F + Sbjct: 4 EHNGEALKAARFLN--YVLTAVVLITALGVAGLSFALLSQSQAEKRTVVPPHIDRA-FTI 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S ++ D +YL MA +I L+ NV+ V L+ Y+ P + ++ L EA+ I Sbjct: 61 SSDAVDEAYLSMMADWWIHLKFNVTPSNVKRQFNLLITYVPPKYWSGLQDKLIREAEFII 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVL-KTWIG---DSKPFT 159 ++V S F ++ + ++ ++G L KT G D +P + Sbjct: 121 ENDVTSFFEVDTLSISLNEMKIRVKGTLNKTIAGRALDPEPVS 163 >UniRef50_C9NPU8 Putative conjugative transfer protein TraE n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU8_9VIBR Length = 188 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 7/114 (6%) Query: 13 MAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQ 72 +AI F+ +SV L+L+ +++ + + QR + P + F +SQ D +YL Sbjct: 20 LAIGFLSLSV-ACLALTGSLVYALTH------QRYTLVPPTISGAFTISQVKVDDAYLSM 72 Query: 73 MALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNS 126 M+ F+ L+ +V+ V + LL Y+ + ++ L E+A+RI+ +V+S Sbjct: 73 MSDYFLHLKFDVTPSNVHRQYGRLLDYVPEHMWSAVQPELLEDAQRIRQQHVSS 126 >UniRef50_B4RLS3 TraE n=10 Tax=Neisseria RepID=B4RLS3_NEIG2 Length = 216 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%) Query: 18 IFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSF 77 +F +L+ +S++VN+ +T +TP VS + YL++MA Sbjct: 13 VFFWILLGMSIAVNLFLSATLLFKGTIVQTTLTPPEIRRSMTVSNIAFSKEYLEEMAPYA 72 Query: 78 IALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWP 137 L LNV+ +TVD + LL+ + P ++ ++ L+ A +K +NV + F T Sbjct: 73 AYLLLNVTPKTVDYQNSQLLKIVSPDYKDALERELSLNALWVKKNNVGTTFSATEATADI 132 Query: 138 QYGRVEIRGVLK 149 V IRGV + Sbjct: 133 SDNTVSIRGVFE 144 >UniRef50_D0SGY9 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY9_ACIJO Length = 190 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 4/137 (2%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F +VL+ +S ++ +I G+ Y L N Q + P A + + + A+ Y M + Sbjct: 22 FTTVLMGIS-NLGLI-GLIGYILMN-QTVVIMPSEQTAKYTIGNDQANKEYFIDMTRDNV 78 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVW-P 137 L NV+ VD + LL+ + P Q MK L + +++IK D + + T + + P Sbjct: 79 NLLYNVTPINVDENFGTLLKRVAPEHQKDMKTYLDKASEQIKRDQITQVWSTTGLYQYIP 138 Query: 138 QYGRVEIRGVLKTWIGD 154 V GV KT++ D Sbjct: 139 GQQAVIANGVTKTYLAD 155 >UniRef50_A3VN26 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN26_9PROT Length = 199 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 1/131 (0%) Query: 59 AVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKR 118 A+S + YL+Q+ L LN + + +L+ P +++ L E +R Sbjct: 56 AISARAPSPEYLEQVTRDVAGLFLNRHPHNLSYFRENILRLAHPSTHGEIESALMETERR 115 Query: 119 IKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLD 178 + + F+ + V P EIRG L T++G + +D Y + E WL+ Sbjct: 116 LIATKTATVFYPAEIYVDPLTLYSEIRGELHTYLGPERVSSDPALYAADWRFEAMRLWLE 175 Query: 179 NFGE-TDDEKK 188 +F T DE + Sbjct: 176 DFYPITADEAR 186 >UniRef50_C5SIK2 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK2_9CAUL Length = 199 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Query: 20 MSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNS---ADASYLQQMALS 76 +SV+ V++ + V + L + RT + P P VS ++ AD YL++ A Sbjct: 17 LSVMTVVAAASIVTNACLSMVLVGQSRTIIIP---TIPAEVSIDAYGAADPLYLERFARD 73 Query: 77 FIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVW 136 L LN S ET+ + + + P A +M IL + + +N + ++F V Sbjct: 74 VSFLFLNRSPETLLYFQREAQKIMEPTAYQEMHKILVRDRQEAIRENRSQSWFPNDFYVD 133 Query: 137 PQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDDE 186 P+ VEIRG ++ G + K Y L + + L +F E E Sbjct: 134 PKTMYVEIRGTIRIEAGGREVDAQNKIYALTFSKNGQLVRLKSFTEITPE 183 >UniRef50_Q0F358 Plasmid-like conjugative transfer protein TraE n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F358_9PROT Length = 194 Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 7/149 (4%) Query: 6 RLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSA 65 RL++ A + S+ + L + V ++ + R++ P F VS + Sbjct: 12 RLASEVRFLRAALLGSIAVALLMLVRLLTAPTDIRME-----VAAPPTVAKDFWVSTSDF 66 Query: 66 DASYLQQMALSFIA-LRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNV 124 SYL+QM +FIA + LN + ++ + L Y+ P A +++ L + +R + Sbjct: 67 SPSYLEQMG-TFIAYMMLNATPASLKFQAEQLKPYLIPEAYGELQSELEAKRERFDRYQM 125 Query: 125 NSAFFQTSVRVWPQYGRVEIRGVLKTWIG 153 ++ F+ + + R+++ G LKT+IG Sbjct: 126 STMFYPNQIYLSKSRCRIQVEGELKTFIG 154 >UniRef50_Q1NGT9 Hypothetical sex pilus assembly and synthesis protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT9_9SPHN Length = 211 Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query: 25 VLSL-SVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLN 83 VL L + V+ G+ Y QRT V P V+ +YL+ M + +AL Sbjct: 44 VLGLFGITVVLGITLYTTSQNQRTIVVPFGAGGDLYVTGGKPSPAYLRTMTRNIVALSGT 103 Query: 84 VSSETVDASHQALLQYIRPGAQNQMK 109 S+ + D Q LL + P A N ++ Sbjct: 104 YSTLSADRQFQELLSIVHPTAYNGIR 129 >UniRef50_A7H3G4 Putative conjugative transfer protein TraE n=4 Tax=Campylobacterales RepID=A7H3G4_CAMJD Length = 192 Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 3/137 (2%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F V ++LS + V+ V R +++ + P N F ++ N YL +M FI Sbjct: 20 FRIVTLLLSFVILVLIWVILARTDSQKVVFMPPKIVNQEFWIAGNQVSKGYLHEMG-QFI 78 Query: 79 ALR-LNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWP 137 + LN++ E + LL + P ++K L E+ I ++ ++ FF +++ Sbjct: 79 SFNLLNITKENARNNIDNLLTLVDPKFYQEVKTKLLEQMNYIIDNAISRTFFVSAIDADA 138 Query: 138 QYGRVEIRGVLKTWIGD 154 + G++++ GV+K I D Sbjct: 139 K-GQIKVFGVVKDIISD 154 >UniRef50_A0B4M7 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=A0B4M7_BURCH Length = 203 Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 1/121 (0%) Query: 45 QRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGA 104 QR + P A + + A+ YL A +AL +V+ TVD + + LL + Sbjct: 45 QRVIIMPPAVRGTYVIGARYANDQYLADQAAYVLALSKSVTPTTVDNNVRILLSMVDDDR 104 Query: 105 QNQMKVILAEEAKRIKNDNVNSAFFQTSV-RVWPQYGRVEIRGVLKTWIGDSKPFTDIKH 163 + +K +A +IK+D V + F V V + V++ G L T+I + ++ K Sbjct: 105 RAALKTEWEADALQIKHDGVTNVFEPMGVGEVDFRNKAVKVTGTLTTYISGKRTSSEQKT 164 Query: 164 Y 164 Y Sbjct: 165 Y 165 >UniRef50_Q6MBA2 Putative F pilus assembly protein traE n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA2_PARUW Length = 189 Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 8/133 (6%) Query: 26 LSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVS 85 L+L + VI V+ + E R + P F V +S A+YL+Q L L L S Sbjct: 25 LTLLMGVILAVSFLCFKTE-RIIIVPSTIEKEFWVDAHSVSATYLEQFGLFLGQLLLTKS 83 Query: 86 SETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIR 145 S + D L ++ P +K L EE + +K N + F+ +V V P+ V Sbjct: 84 SYSADLHRNILCRHTEPQYLALLKQRLMEEEETLKKQNASYVFYLNNVHVNPKELTV--- 140 Query: 146 GVLKTWIGDSKPF 158 T +GD + F Sbjct: 141 ----TLLGDRQFF 149 >UniRef50_A0R7R2 Conserved hypothetical sex pilus assembly and synthesis protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7R2_PELPD Length = 199 Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 9/171 (5%) Query: 23 LIVLSLSVNVIQGVNNYRLQNEQ---RTAVTPMAFNAPFAVSQNSADASYLQQMALSFIA 79 +V+ L + + VN Y ++N Q + + P N +S A Y++Q A Sbjct: 22 FVVVVLGITTV--VNTYMIRNAQQMEKVVIIPSVINDKMWLSGTKASDEYVKQFARDVSN 79 Query: 80 LRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQY 139 + L V + LL P + + +L A+RI+ S F+ T + + Sbjct: 80 MFLTYHPSNVRTNFNDLLAMYDPSEFAEAQRVLYNLAERIEESKAASGFYITKLVNNEEK 139 Query: 140 GRVEIRGVLKTWIGDSKPFTD--IKHYILILKRENGVTWLDNFGETDDEKK 188 ++EI G KT I + K TD IK Y+L K E+G + F E + K Sbjct: 140 HQLEITGS-KTMIINGK-VTDNSIKIYLLDYKIESGKFCILRFMEKSEYDK 188 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P10514 Protein traE n=48 Tax=root RepID=TRAE2_ECOLX 239 3e-62 UniRef50_P12057 Protein traE n=8 Tax=Gammaproteobacteria RepID=T... 196 4e-49 UniRef50_B6ICF2 TraE protein n=1 Tax=Escherichia coli SE11 RepID... 189 5e-47 UniRef50_Q7MBN7 Putative conjugative transfer protein TraE n=4 T... 175 6e-43 UniRef50_A4WGS2 TraE family protein n=1 Tax=Enterobacter sp. 638... 172 3e-42 UniRef50_B2VB07 TraE protein n=1 Tax=Erwinia tasmaniensis RepID=... 169 3e-41 UniRef50_A8QYP7 TraE protein n=2 Tax=Legionellaceae RepID=A8QYP7... 166 3e-40 UniRef50_A5KZF3 Sex pilus assembly and synthesis protein TraE n=... 161 1e-38 UniRef50_A9L6K5 Type IV conjugative transfer system protein TraE... 158 1e-37 UniRef50_Q8D6A3 Putative uncharacterized protein n=1 Tax=Vibrio ... 157 1e-37 UniRef50_A1AKM2 Conserved hypothetical sex pilus assembly and sy... 156 3e-37 UniRef50_Q47DN0 Plasmid-like conjugative transfer protein TraE n... 156 3e-37 UniRef50_B6ESX5 Conjugative transfer protein TraE n=2 Tax=Vibrio... 152 5e-36 UniRef50_Q5ZTS0 Putative conjugative transfer protein TraE n=1 T... 152 6e-36 UniRef50_Q2LTZ4 Hypothetical sex pilus assembly and synthesis pr... 149 5e-35 UniRef50_UPI00016ACDC8 hypothetical protein Bpse38_32205 n=1 Tax... 149 6e-35 UniRef50_Q1MXI2 Plasmid-like conjugative transfer protein TraE n... 148 1e-34 UniRef50_D2U003 Conjugal transfer pilus assembly protein TraE n=... 148 1e-34 UniRef50_C5SIK2 Putative uncharacterized protein n=1 Tax=Asticca... 146 3e-34 UniRef50_C8QE98 TraE family protein n=2 Tax=Pantoea sp. At-9b Re... 144 1e-33 UniRef50_Q0F358 Plasmid-like conjugative transfer protein TraE n... 142 4e-33 UniRef50_C9NPU8 Putative conjugative transfer protein TraE n=1 T... 141 9e-33 UniRef50_B4EQI4 Putative TraE conjugative transfer protein n=1 T... 140 1e-32 UniRef50_B4RLS3 TraE n=10 Tax=Neisseria RepID=B4RLS3_NEIG2 140 3e-32 UniRef50_Q5WSC2 Putative uncharacterized protein n=2 Tax=Legione... 139 4e-32 UniRef50_A1WDF9 Putative uncharacterized protein n=1 Tax=Acidovo... 138 9e-32 UniRef50_A3VN26 Putative uncharacterized protein n=1 Tax=Parvula... 133 4e-30 UniRef50_Q2NQ47 Putative TraE n=1 Tax=Sodalis glossinidius str. ... 121 1e-26 UniRef50_D0SGY9 Putative uncharacterized protein n=1 Tax=Acineto... 119 7e-26 Sequences not found previously or not previously below threshold: UniRef50_A0R7R2 Conserved hypothetical sex pilus assembly and sy... 124 2e-27 UniRef50_A0B4M7 Putative uncharacterized protein n=3 Tax=Burkhol... 115 8e-25 UniRef50_A4XE91 TraE family protein n=5 Tax=Sphingomonadaceae Re... 108 9e-23 UniRef50_Q2N5H9 Putative conjugative transfer protein TraE n=5 T... 106 4e-22 UniRef50_A7H3G4 Putative conjugative transfer protein TraE n=4 T... 98 1e-19 UniRef50_Q1N904 TraE n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N904... 94 3e-18 UniRef50_B2I3Y7 Putative uncharacterized protein n=1 Tax=Acineto... 89 6e-17 UniRef50_Q1NGT9 Hypothetical sex pilus assembly and synthesis pr... 89 8e-17 UniRef50_Q5NX50 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 85 1e-15 UniRef50_Q6MBA2 Putative F pilus assembly protein traE n=2 Tax=C... 85 1e-15 UniRef50_C1SHE5 Putative uncharacterized protein n=1 Tax=Denitro... 83 5e-15 UniRef50_C4YZZ8 Putative uncharacterized protein n=1 Tax=Rickett... 74 2e-12 UniRef50_A2PNK5 Sex pilus assembly n=17 Tax=Gammaproteobacteria ... 73 6e-12 UniRef50_A4JTP4 Sex pilus assembly protein n=2 Tax=Burkholderial... 72 7e-12 UniRef50_Q3IUW8 Putative uncharacterized protein traE n=1 Tax=Rh... 72 1e-11 UniRef50_Q19NT0 TrhE n=10 Tax=Enterobacteriaceae RepID=Q19NT0_ECOK1 69 7e-11 UniRef50_C4NVT6 TraE n=10 Tax=Gammaproteobacteria RepID=C4NVT6_E... 68 1e-10 UniRef50_D2U0R4 Conjugative transfer pilus assembly protein TraE... 66 5e-10 UniRef50_B0RL16 Hypothetical sex pilus assembly and synthesis pr... 66 6e-10 UniRef50_B7J827 Type IV conjugative transfer system protein TraE... 65 1e-09 UniRef50_C0QUX4 Type IV conjugative transfer system protein TraE... 65 1e-09 UniRef50_C1MEK1 Pilus biogenesis protein n=1 Tax=Citrobacter sp.... 64 2e-09 UniRef50_B7XGQ5 Putative pilus assembly protein n=2 Tax=Pseudomo... 63 5e-09 UniRef50_Q8L278 Pilus biogenesis protein n=1 Tax=Proteus vulgari... 61 2e-08 UniRef50_A8F1T1 Conjugative transfer protein TraE n=26 Tax=Ricke... 60 3e-08 UniRef50_A0L344 Putative uncharacterized protein n=1 Tax=Shewane... 45 0.001 UniRef50_A4V6Q7 Putative transmembrane protein n=1 Tax=Pseudomon... 43 0.006 >UniRef50_P10514 Protein traE n=48 Tax=root RepID=TRAE2_ECOLX Length = 188 Score = 239 bits (610), Expect = 3e-62, Method: Composition-based stats. Identities = 185/188 (98%), Positives = 185/188 (98%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPM FN PFAV Sbjct: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMGFNVPFAV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK Sbjct: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 NDNVNSAFFQTSVRVWPQYGRVEI GVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF Sbjct: 121 NDNVNSAFFQTSVRVWPQYGRVEIHGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 Query: 181 GETDDEKK 188 GETDDEKK Sbjct: 181 GETDDEKK 188 >UniRef50_P12057 Protein traE n=8 Tax=Gammaproteobacteria RepID=TRAE1_SALTI Length = 187 Score = 196 bits (497), Expect = 4e-49, Method: Composition-based stats. Identities = 85/187 (45%), Positives = 123/187 (65%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 ME AR S+++++A+ + ++ L+ + V N L +EQRT VTPM +NAPF V Sbjct: 1 MEISARNSSTKIIAVIILSLTTLVFILGFAVAWLAVTNRALIHEQRTVVTPMTYNAPFVV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+ AD Y + M LSF+ALRLNVS ETVD++H L+ ++ P A+ + K +L EEA +IK Sbjct: 61 SETKADTEYFRMMTLSFLALRLNVSPETVDSNHAFLMSFVEPEAREEFKKVLQEEAAQIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 ++VNS F+ T + V+P GR+++RGVLK WIG+S+P T+IK Y L LK G T + F Sbjct: 121 ANDVNSTFYTTEINVYPVDGRIDVRGVLKMWIGNSRPSTEIKTYRLRLKYTGGFTRIGRF 180 Query: 181 GETDDEK 187 E +EK Sbjct: 181 YEVTNEK 187 >UniRef50_B6ICF2 TraE protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF2_ECOSE Length = 192 Score = 189 bits (479), Expect = 5e-47, Method: Composition-based stats. Identities = 81/188 (43%), Positives = 117/188 (62%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ A S + ++ F+ + + LSLS NV+ + L+ Q+ PM FN PF++ Sbjct: 1 MDLSAHRSALKFTSLTFVILLFFLGLSLSANVLAWLRIEDLERGQKETYIPMFFNQPFSL 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+N ADASYLQQ+A S + LRLNV+ E++ A HQALL+Y A+ QMK IL EA +I Sbjct: 61 SRNVADASYLQQVAESLMFLRLNVTPESIKAQHQALLRYFDTAARPQMKAILDAEASQII 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +NV+SAF+ T + V+PQ G V+ RG LKTWIG + + K Y L L +G+T + +F Sbjct: 121 TNNVSSAFYMTGIDVYPQAGVVDFRGTLKTWIGKREALPEEKAYRLELGYRDGMTTIRSF 180 Query: 181 GETDDEKK 188 E +EK+ Sbjct: 181 KELVNEKE 188 >UniRef50_Q7MBN7 Putative conjugative transfer protein TraE n=4 Tax=Vibrionales RepID=Q7MBN7_VIBVY Length = 200 Score = 175 bits (444), Expect = 6e-43, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 1/170 (0%) Query: 15 IAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMA 74 + F+ ++ + + L N++ G +Y+ Q + P + F VS + D YL+QMA Sbjct: 25 LNFLLVAGFLAM-LITNLVLGYTSYQALTHQSRTLIPPTISKAFTVSDGAVDEPYLEQMA 83 Query: 75 LSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVR 134 + L+LNV+ V LL+Y+ + N ++ L EA IK DN++S F S+R Sbjct: 84 DYLLYLKLNVTPANVSRQFGQLLEYVDAQSWNSVQPKLLREATVIKKDNISSQFSVDSIR 143 Query: 135 VWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETD 184 + +V++ G L+ ++G ++K Y + E G L + E + Sbjct: 144 ISLDTLQVQLYGKLQKYVGRRALEPEMKWYQVSFSYEQGSIGLLSIEEVE 193 >UniRef50_A4WGS2 TraE family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS2_ENT38 Length = 193 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 5/189 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 ME + + ++ AFI + L+VLS + NV+ G + Q+T TPM +N PF Sbjct: 1 MELKIKGERDKQLSYAFIGLVSLLVLSGTGNVLTGSLAWYFATTQKTVTTPMTYNQPFTS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 SADAS + A SFI RLNVS E +D + + LL ++ ++ ++ L EA+RIK Sbjct: 61 DAVSADASGMTMFASSFIYWRLNVSPENIDNNQKMLLGFVPSTERDLLRKALDVEAERIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSK----PFTDIKHYILILKRENGVTW 176 + + F +RV G VE G LK+ + K Y L + +NG+ Sbjct: 121 KGGITTRFDTKDIRVMTD-GSVEFSGTLKSATTNGAITTPLKDQDKTYRLNISYQNGLVN 179 Query: 177 LDNFGETDD 185 L +F E Sbjct: 180 LHSFEELQP 188 >UniRef50_B2VB07 TraE protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB07_ERWT9 Length = 188 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 2/187 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + + A+AF+ M+ L+ SL +V ++ N Q PM F+ PF Sbjct: 1 MKLSTKKDIDKRTAVAFLAMAGLLSASLLTSVGAIGLAWKFHNTQERITVPMGFDKPFVS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S DA+ + + ++LRLNV+ ET+D + LL Y + ++K L EA I Sbjct: 61 SNQRGDANLNSMLVRALVSLRLNVTPETIDPQQKELLSYTDSENRAELKRALEVEADYIH 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGV--LKTWIGDSKPFTDIKHYILILKRENGVTWLD 178 ++V++ F P+ E+ G T G K KHYI+ + NG+ L+ Sbjct: 121 KNDVSAQFLIEKFDYNPETNDTEVAGQQLASTSGGKLKLPDSSKHYIVNVSYVNGMVKLN 180 Query: 179 NFGETDD 185 F E Sbjct: 181 KFTEVLP 187 >UniRef50_A8QYP7 TraE protein n=2 Tax=Legionellaceae RepID=A8QYP7_9GAMM Length = 189 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 85/185 (45%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + S ++ F M VL+ L NV+ + N VTP + N + Sbjct: 1 MDFKSYQSRLSQLSARFNLMVVLVFGLLVSNVLLSCFLNKAWNHHTIEVTPFSGNPGYFK 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S D YL MA +F+ RLNV+ ETVDA+H+ LL ++ Q+ +L EAK IK Sbjct: 61 SATRVDGHYLSLMAENFVNERLNVTPETVDANHKRLLSFVNHQKYTQILRLLTNEAKVIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 ++S F T ++ P + GVLK ++G + K Y+L + ++ + F Sbjct: 121 AKKMSSTFDITEIKTNPNQLTAVVSGVLKRYVGLQSLSDERKTYLLQFQYKDSRLSIIKF 180 Query: 181 GETDD 185 D Sbjct: 181 SPFKD 185 >UniRef50_A5KZF3 Sex pilus assembly and synthesis protein TraE n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZF3_9GAMM Length = 186 Score = 161 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 3/184 (1%) Query: 2 EHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVS 61 +G L +R + ++ +V+++ +L V + + Q E+RT P + F +S Sbjct: 5 HNGEALKAARFLN--YVLTAVVLITALGVAGLSFALLSQSQAEKRTV-VPPHIDRAFTIS 61 Query: 62 QNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKN 121 ++ D +YL MA +I L+ NV+ V L+ Y+ P + ++ L EA+ I Sbjct: 62 SDAVDEAYLSMMADWWIHLKFNVTPSNVKRQFNLLITYVPPKYWSGLQDKLIREAEFIIE 121 Query: 122 DNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 ++V S F ++ + ++ ++G L I + Y+L +G+ L + Sbjct: 122 NDVTSFFEVDTLSISLNEMKIRVKGTLNKTIAGRALDPEPVSYLLQADYSSGLIELHSIV 181 Query: 182 ETDD 185 + Sbjct: 182 QEVP 185 >UniRef50_A9L6K5 Type IV conjugative transfer system protein TraE n=6 Tax=Shewanella baltica RepID=A9L6K5_SHEB9 Length = 188 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 84/188 (44%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M ++ R+ + + +++ N + + + V P +A F V Sbjct: 1 MLQKNKIDFIRIAKSLNTLLLIGFTVAMISNTVLASIVWMAYFNKSRTVVPPTISAAFTV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S S D YLQQM+ F L+LNV+ +VD ++ L YI + M+ +L +EA IK Sbjct: 61 SDTSIDEPYLQQMSEYFAFLKLNVTPASVDHQYKQLASYIDEADWHVMQPLLVDEAAMIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 N++S F ++ +V V+I G L ++G+ + YI+ + ++G L Sbjct: 121 KQNISSHFTISTSQVALDDRLVKITGTLNKYVGNRALEPETISYIIAMNYDHGQLSLKAI 180 Query: 181 GETDDEKK 188 + + K Sbjct: 181 KKVQKDVK 188 >UniRef50_Q8D6A3 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D6A3_VIBVU Length = 189 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 5/182 (2%) Query: 2 EHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVS 61 G L+ S+++ +F S+ VNV+ G++ + +E+ + P + F +S Sbjct: 5 HQGNLLALSKLLNFLLVFG---FAASMLVNVVLGLSLAKTLSEKSRTLVPPTISQAFTIS 61 Query: 62 QNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKN 121 + DA YLQ M F+ L+LNV+ V + LL Y+ + ++ +L ++A+ +K Sbjct: 62 DTAIDAPYLQLMGEYFLKLKLNVTPANVFRQYGLLLDYVPTENWSTIQPVLVKDAEHLKK 121 Query: 122 DNVNSAFF--QTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 N S F + + + + G L +GD +++ Y + + NGV L Sbjct: 122 YNTTSRFDALPGRTEISIENRQFKQTGHLTKTVGDRTLPSELVTYTVQMDYSNGVIELIG 181 Query: 180 FG 181 Sbjct: 182 IK 183 >UniRef50_A1AKM2 Conserved hypothetical sex pilus assembly and synthesis protein n=2 Tax=Desulfuromonadales RepID=A1AKM2_PELPD Length = 192 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 1/176 (0%) Query: 8 STSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADA 67 +S + A + V++VL ++V I + N QR + P A N+ ++S + A Sbjct: 9 KSSNIFAENRLLKFVVVVLGIAVA-INTAGLFIALNSQRVILVPPAINSKISISGDKASE 67 Query: 68 SYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSA 127 YL++ + L L + + LL P + L E A +I+N +SA Sbjct: 68 EYLKEFTRYILNLALTYNPVNARSQFSELLAVYDPAEFQATRKELYELADKIENTQASSA 127 Query: 128 FFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 F+ S+ + R+E+ G KT++ D K K Y++ + ENG L E Sbjct: 128 FYIHSIINDTEKRRLEVTGTKKTYMVDQKAEDTQKVYLIEYRFENGKFILVRLYEK 183 >UniRef50_Q47DN0 Plasmid-like conjugative transfer protein TraE n=5 Tax=Betaproteobacteria RepID=Q47DN0_DECAR Length = 188 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 76/185 (41%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + M + + + + + ++ + L RT V P + + F V Sbjct: 1 MDFERLNGDIKEMRRRNRGLGLAVGVLAAGQILALIVILNLLGTVRTVVVPPSIDKTFWV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 +++ A YL+QM L L+V+ ++D + LL Y+ P +K EA+R+K Sbjct: 61 TRDKASNEYLEQMGSFIAWLVLDVTPASIDWKKEILLGYVEPEQYGPLKTRQEVEAERLK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 N + F + + V IRG L+T + + D+K Y + L +F Sbjct: 121 RINAATVFAPQQLVPSEEGQSVVIRGRLRTVVNGFETANDLKAYRVEFNYAGARMHLKSF 180 Query: 181 GETDD 185 E + Sbjct: 181 KEVAN 185 >UniRef50_B6ESX5 Conjugative transfer protein TraE n=2 Tax=Vibrionaceae RepID=B6ESX5_ALISL Length = 186 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 72/163 (44%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 + + VLSL V++ + L N + + P + + F VS + D SY QMA + Sbjct: 19 LLLIGFVLSLVVSITLALGLLSLANNKSRTLVPPSISKAFTVSDGTIDESYASQMAEYIL 78 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQ 138 L+LNV+ V+ LL Y A + ++ L E+ IK N++S F + V V Sbjct: 79 YLKLNVTPANVERQFSQLLDYANADAWSSVQPQLVRESVLIKKSNLSSTFSVSRVEVAMD 138 Query: 139 YGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 V + GVL +GD Y++ LK E G + Sbjct: 139 SLIVNVHGVLNKSVGDRALTPVSCSYLIYLKYEQGTLTFSSIK 181 >UniRef50_Q5ZTS0 Putative conjugative transfer protein TraE n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS0_LEGPH Length = 187 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 83/181 (45%), Gaps = 1/181 (0%) Query: 4 GARLSTSRVMAIAFIFMS-VLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQ 62 + L + + + FI +S VL+ ++ ++ V + ++ T P + F +S Sbjct: 7 KSELMKEKKIRVLFIGISSVLLAMTFMQSITIVVLLHYAHSKHETHFIPPKISQEFTLSG 66 Query: 63 NSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKND 122 YL+ M LR N++S + ALL Y+ P ++ L +E ++I ++ Sbjct: 67 TGVSEGYLRDMTNFLTQLRFNITSSSATYQFNALLGYVAPSLYGDIRAQLVKEVEQINHE 126 Query: 123 NVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGE 182 +++S F+ ++ + ++ V++ G +K ++G + +++ E G+ L N + Sbjct: 127 HLSSVFYPSTFEIDIKHLSVKVMGQMKRFVGADLMSDVRETFLIRYSYEYGLLKLTNLEK 186 Query: 183 T 183 Sbjct: 187 V 187 >UniRef50_Q2LTZ4 Hypothetical sex pilus assembly and synthesis protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ4_SYNAS Length = 194 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 1/178 (0%) Query: 8 STSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADA 67 TS ++A + + ++V+ + V YR N QRT + P + ++ + Sbjct: 9 KTSNIVAENRL-LKFVVVVIGVAAIANAVMTYRALNYQRTIIVPPVLKSRIEITGDRVSE 67 Query: 68 SYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSA 127 Y++ + AL + S TV LL P A + K +L E A R+ V S Sbjct: 68 EYVKAFSRYIAALSFSYSPGTVKPQFDELLALYAPEAFPEGKRVLYELADRVITTRVTSV 127 Query: 128 FFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDD 185 FF + V + ++E+ G + ++ D K K Y++ + +G + E +D Sbjct: 128 FFMGKLYVDGEKNQIEVSGQRRQYVDDRKVEDITKTYLIDYRISDGRFQVVRISEKED 185 >UniRef50_UPI00016ACDC8 hypothetical protein Bpse38_32205 n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDC8 Length = 196 Score = 149 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 2/185 (1%) Query: 5 ARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNS 64 A+ ++ F +I NV+ + T + P P+ + Sbjct: 6 AKNERDKLTDTIR-FHRKIISGQAIANVLLALLVGWTVLHDTTRIVPPEVKRPYQIGAGQ 64 Query: 65 ADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNV 124 AD YL M+ ++L L + ETVD ++ LL+ + P K A RIK + + Sbjct: 65 ADQDYLSDMSGYVLSLILTSTPETVDYNNSILLKLVEPDQYPVYKTRFDAAAIRIKREKI 124 Query: 125 NSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE-NGVTWLDNFGET 183 + + S +++ + RV +G LKT+IGD T Y++ L +G T++ E Sbjct: 125 TTIWSPQSQQIFVEAKRVIWKGTLKTYIGDQPVSTLPHTYVVELPISFSGRTYVRKAEEV 184 Query: 184 DDEKK 188 D + Sbjct: 185 LDSTR 189 >UniRef50_Q1MXI2 Plasmid-like conjugative transfer protein TraE n=1 Tax=Bermanella marisrubri RepID=Q1MXI2_9GAMM Length = 194 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 83/184 (45%), Gaps = 3/184 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M S M ++ +F + L L + NV+ ++T + P+ F + F V Sbjct: 1 MNRDVYKSVIAQMNVSRLFWASLSSLLIVSNVLLAYFVVTADTSEKTTLVPIGFESEFWV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 D YL+QM+L F+ L + V++ + +L+Y+ P A ++ EA+RI+ Sbjct: 61 HNEEVDPEYLEQMSLFFLDLYTDYHPSNVESRFKMILKYVEPSAHGLLERRFDSEAQRIR 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTD-IKHYILILKRENGVTWLDN 179 N +++S F +++++ + V + G+L+ + D + + + ++G ++ Sbjct: 121 NSSLSSTFHPSAIKI--RETTVFVHGILQGLVAGKATDPDLDAVFRIDFEHDHGRLFIKT 178 Query: 180 FGET 183 Sbjct: 179 IERV 182 >UniRef50_D2U003 Conjugal transfer pilus assembly protein TraE n=1 Tax=Arsenophonus nasoniae RepID=D2U003_9ENTR Length = 172 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 2/166 (1%) Query: 20 MSVLIVLSLSVNVI--QGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSF 77 + ++ L + ++ +L N +T + PM + F+ DA YL+ M LS Sbjct: 5 LITVLSLGVCYRLLMQNRELISQLINNHQTIIIPMVDHEGFSFYGTRGDARYLRLMGLSL 64 Query: 78 IALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWP 137 + LRLNVS++T+ SH LL Y + ++ +LAEE +R+ + +S F+ V+V P Sbjct: 65 LNLRLNVSAQTIKDSHNLLLAYSDTHLREKLIEVLAEERQRMAINEASSTFYLKEVKVSP 124 Query: 138 QYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 G V+I G L + G KHY L L+ +G L +F E Sbjct: 125 DSGVVDITGELHFFYGIKAVEPVDKHYRLRLETRDGALKLTDFVEL 170 >UniRef50_C5SIK2 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK2_9CAUL Length = 199 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 6/170 (3%) Query: 20 MSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNS---ADASYLQQMALS 76 +SV+ V++ + V + L + RT + P P VS ++ AD YL++ A Sbjct: 17 LSVMTVVAAASIVTNACLSMVLVGQSRTIIIP---TIPAEVSIDAYGAADPLYLERFARD 73 Query: 77 FIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVW 136 L LN S ET+ + + + P A +M IL + + +N + ++F V Sbjct: 74 VSFLFLNRSPETLLYFQREAQKIMEPTAYQEMHKILVRDRQEAIRENRSQSWFPNDFYVD 133 Query: 137 PQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDDE 186 P+ VEIRG ++ G + K Y L + + L +F E E Sbjct: 134 PKTMYVEIRGTIRIEAGGREVDAQNKIYALTFSKNGQLVRLKSFTEITPE 183 >UniRef50_C8QE98 TraE family protein n=2 Tax=Pantoea sp. At-9b RepID=C8QE98_9ENTR Length = 199 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 4/187 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M + R +RV +A + L+ LSL+ N I G + Q+T PM F+ PF Sbjct: 1 MRYKVREGRNRVTVLALAGLGSLLALSLAANGITGALAWHFARTQKTITVPMLFDRPFVS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 + S D + + SFI LRL+V+ ETVD+ H ALL+++ P ++ MK LA EA+ I+ Sbjct: 61 TAASGDDALNGLLVRSFINLRLSVTPETVDSQHAALLRFVPPEDRDAMKKQLAAEAEYIR 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLK--TWIGDSK--PFTDIKHYILILKRENGVTW 176 + V+S F G + RG L T G+ K K + L + +G+ Sbjct: 121 KNGVSSVFRLDDETTDTTTGDIIARGTLSAGTTNGNLKLSLPDTKKAWRLSVHYVDGLIR 180 Query: 177 LDNFGET 183 L F E Sbjct: 181 LTAFTEV 187 >UniRef50_Q0F358 Plasmid-like conjugative transfer protein TraE n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F358_9PROT Length = 194 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 75/176 (42%), Gaps = 5/176 (2%) Query: 5 ARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNS 64 RL++ A + S+ + L + V ++ + R++ P F VS + Sbjct: 11 ERLASEVRFLRAALLGSIAVALLMLVRLLTAPTDIRME-----VAAPPTVAKDFWVSTSD 65 Query: 65 ADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNV 124 SYL+QM + LN + ++ + L Y+ P A +++ L + +R + Sbjct: 66 FSPSYLEQMGTFIAYMMLNATPASLKFQAEQLKPYLIPEAYGELQSELEAKRERFDRYQM 125 Query: 125 NSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 ++ F+ + + R+++ G LKT+IG + + + K NG ++ + Sbjct: 126 STMFYPNQIYLSKSRCRIQVEGELKTFIGGKLGSSKTRKLDIGCKNINGRFYVTSI 181 >UniRef50_C9NPU8 Putative conjugative transfer protein TraE n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU8_9VIBR Length = 188 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 4/189 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSV-LIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFA 59 ME R + + +F+++ + LS++ + G Y QR + P + F Sbjct: 1 MERVIRHQLLELSRLLNVFLAIGFLSLSVACLALTGSLVY-ALTHQRYTLVPPTISGAFT 59 Query: 60 VSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRI 119 +SQ D +YL M+ F+ L+ +V+ V + LL Y+ + ++ L E+A+RI Sbjct: 60 ISQVKVDDAYLSMMSDYFLHLKFDVTPSNVHRQYGRLLDYVPEHMWSAVQPELLEDAQRI 119 Query: 120 KNDNVNSAFF--QTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWL 177 + +V+S ++ V + G L +G+ + ++ + + G L Sbjct: 120 RQQHVSSHLDVLPDQTQIDVDSLVVRVSGTLAKAVGERQLPPRAVDVLIQMAYQQGTLSL 179 Query: 178 DNFGETDDE 186 + + + + Sbjct: 180 LSIHQEESQ 188 >UniRef50_B4EQI4 Putative TraE conjugative transfer protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI4_BURCJ Length = 196 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 66/151 (43%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F+ + +V +L V+ + L T + P + + +A+ YL M+ + Sbjct: 19 FLKLCLVFTLGTIVLGLILVMFLVLRDPTRIVPPEIQHAYVIGSGTANGDYLSDMSDYVL 78 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQ 138 +L+ + ETVD ++ +L+ P A +K +L A RIK + + + F + + Sbjct: 79 SLQATTTPETVDHNNAVILKMTDPAAYPVIKTMLDAAAIRIKRERITTIFVMRTKSIDRP 138 Query: 139 YGRVEIRGVLKTWIGDSKPFTDIKHYILILK 169 RV G KT+IGD + + ++ Sbjct: 139 NNRVITTGTFKTYIGDKLVGEEDRSLLVAFN 169 >UniRef50_B4RLS3 TraE n=10 Tax=Neisseria RepID=B4RLS3_NEIG2 Length = 216 Score = 140 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 72/167 (43%) Query: 18 IFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSF 77 +F +L+ +S++VN+ +T +TP VS + YL++MA Sbjct: 13 VFFWILLGMSIAVNLFLSATLLFKGTIVQTTLTPPEIRRSMTVSNIAFSKEYLEEMAPYA 72 Query: 78 IALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWP 137 L LNV+ +TVD + LL+ + P ++ ++ L+ A +K +NV + F T Sbjct: 73 AYLLLNVTPKTVDYQNSQLLKIVSPDYKDALERELSLNALWVKKNNVGTTFSATEATADI 132 Query: 138 QYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETD 184 V IRGV + ++ + ++ K G L + E Sbjct: 133 SDNTVSIRGVFEVKRNNALVEQKDRELLISFKNNYGTLQLLSIKEVQ 179 >UniRef50_Q5WSC2 Putative uncharacterized protein n=2 Tax=Legionella RepID=Q5WSC2_LEGPA Length = 185 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 3/178 (1%) Query: 9 TSRVMAIAFIFMSVLIVLSLSVNV---IQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSA 65 V++ + + + + +++ + I G + N + T P+ + +S + Sbjct: 6 RDNVLSKNKVLLHLTLAWAVTSTIAVFILGGLCVHVVNNKETHWLPICTEDGYFLSNSFF 65 Query: 66 DASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVN 125 SY++ M I LRL + +TV A +L+ I Q K IL E+ +K N++ Sbjct: 66 SPSYIKDMTKKVIQLRLTYNPDTVAARFASLVHLIPASHQEAFKTILDSESSVVKEKNIS 125 Query: 126 SAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 S F++ + + + +++G+L + K Y++ NG+ W E Sbjct: 126 SVFYEKDIEIDESTLQAKVKGILNRTSHGLEVKPQSKVYLVQFAHLNGMMWPKAIKEV 183 >UniRef50_A1WDF9 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WDF9_ACISJ Length = 197 Score = 138 bits (348), Expect = 9e-32, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 1/161 (0%) Query: 25 VLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNV 84 L + + T + P P+ + N A+ YL MA + L V Sbjct: 25 AGLLGTLFFGVLLLGFVVVRDTTKIVPPEVKRPYEIGSNYANKDYLLDMAGYVLGTVLTV 84 Query: 85 SSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEI 144 + ETVD +++ +L+ P +K L A R+K + V + + V Q RV++ Sbjct: 85 TPETVDYNNKVILKMADPDGYAGLKTALDAAAMRLKQERVTTIWVPRKEEVSEQDKRVKV 144 Query: 145 RGVLKTWIGDSKPFTDIKHYILILKR-ENGVTWLDNFGETD 184 G LKT+I D K Y++ +G ++ E Sbjct: 145 SGKLKTFIADKLTSEREKDYLVEFTITTSGRLYVSKIEEIV 185 >UniRef50_A3VN26 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN26_9PROT Length = 199 Score = 133 bits (334), Expect = 4e-30, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 1/168 (0%) Query: 22 VLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALR 81 VL V +L + V + Y + R + + A+S + YL+Q+ L Sbjct: 19 VLAVFTLLLGVTGLLQTYLIATRDRHVILTPTLLSDTAISARAPSPEYLEQVTRDVAGLF 78 Query: 82 LNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGR 141 LN + + +L+ P +++ L E +R+ + F+ + V P Sbjct: 79 LNRHPHNLSYFRENILRLAHPSTHGEIESALMETERRLIATKTATVFYPAEIYVDPLTLY 138 Query: 142 VEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETD-DEKK 188 EIRG L T++G + +D Y + E WL++F DE + Sbjct: 139 SEIRGELHTYLGPERVSSDPALYAADWRFEAMRLWLEDFYPITADEAR 186 >UniRef50_A0R7R2 Conserved hypothetical sex pilus assembly and synthesis protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7R2_PELPD Length = 199 Score = 124 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 2/186 (1%) Query: 1 MEHGARLS-TSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFA 59 M+ LS S + + V++VL ++ V+ Q ++ + P N Sbjct: 1 MKMTNYLSNASNLYGQNRLLKFVVVVLGITT-VVNTYMIRNAQQMEKVVIIPSVINDKMW 59 Query: 60 VSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRI 119 +S A Y++Q A + L V + LL P + + +L A+RI Sbjct: 60 LSGTKASDEYVKQFARDVSNMFLTYHPSNVRTNFNDLLAMYDPSEFAEAQRVLYNLAERI 119 Query: 120 KNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 + S F+ T + + ++EI G I IK Y+L K E+G + Sbjct: 120 EESKAASGFYITKLVNNEEKHQLEITGSKTMIINGKVTDNSIKIYLLDYKIESGKFCILR 179 Query: 180 FGETDD 185 F E + Sbjct: 180 FMEKSE 185 >UniRef50_Q2NQ47 Putative TraE n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NQ47_SODGM Length = 118 Score = 121 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 59/120 (49%), Positives = 89/120 (74%), Gaps = 2/120 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+H ARL++++++A++ + + + LS++ NVI + YRLQ +++ V PM F APFA+ Sbjct: 1 MKHAARLNSNKIIALSLVLLDAFLFLSVTANVILAITYYRLQGDRQVVVVPMLFKAPFAL 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+NS DASYL+QMALSF+ALRLNV+ ETV+ASHQ LL ++P AQ +K LA +R++ Sbjct: 61 SENSMDASYLEQMALSFVALRLNVTPETVEASHQFLLSMVKPSAQKSLK--LAWRKRRVR 118 >UniRef50_D0SGY9 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY9_ACIJO Length = 190 Score = 119 bits (297), Expect = 7e-26, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 4/166 (2%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F +VL+ +S N+ + Q + P A + + + A+ Y M + Sbjct: 22 FTTVLMGIS---NLGLIGLIGYILMNQTVVIMPSEQTAKYTIGNDQANKEYFIDMTRDNV 78 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVW-P 137 L NV+ VD + LL+ + P Q MK L + +++IK D + + T + + P Sbjct: 79 NLLYNVTPINVDENFGTLLKRVAPEHQKDMKTYLDKASEQIKRDQITQVWSTTGLYQYIP 138 Query: 138 QYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 V GV KT++ D + + ++G + N E Sbjct: 139 GQQAVIANGVTKTYLADKLVTSRAQKIKFEYVMKSGQLFPKNITEV 184 >UniRef50_A0B4M7 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=A0B4M7_BURCH Length = 203 Score = 115 bits (288), Expect = 8e-25, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 3/187 (1%) Query: 4 GARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQN 63 A S ++ + VL+ + +V+ + L QR + P A + + Sbjct: 5 KAAQSREQLQSENRFLKKVLLGNG-TTSVVIALTCAWLVITQRVIIMPPAVRGTYVIGAR 63 Query: 64 SADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDN 123 A+ YL A +AL +V+ TVD + + LL + + +K +A +IK+D Sbjct: 64 YANDQYLADQAAYVLALSKSVTPTTVDNNVRILLSMVDDDRRAALKTEWEADALQIKHDG 123 Query: 124 VNSAFFQTSV-RVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE-NGVTWLDNFG 181 V + F V V + V++ G L T+I + ++ K Y + G L + Sbjct: 124 VTNVFEPMGVGEVDFRNKAVKVTGTLTTYISGKRTSSEQKTYEVYFGITVFGRLVLLDIR 183 Query: 182 ETDDEKK 188 E K+ Sbjct: 184 EATRGKQ 190 >UniRef50_A4XE91 TraE family protein n=5 Tax=Sphingomonadaceae RepID=A4XE91_NOVAD Length = 207 Score = 108 bits (270), Expect = 9e-23, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 3/186 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ ++ + +++ +++V+ + + R V P + Sbjct: 1 MDLSISHGQAQRLLKQRNLLAITATGLFALSVV---LTFTAAHRDREVVLQPVLAKPLTL 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S + D YL+ + L LN S + ++L P +MK L + Sbjct: 58 SSSHIDKDYLELVTRDAALLTLNRSPSNLQYWMDSILAITDPRTHGRMKAELMKIFNEQN 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 NV+ F ++ V P+ E+ GVL T +G + ++ + + + L F Sbjct: 118 GSNVSQFFTIENLSVDPEALTSEVNGVLHTVVGSKEVTSEARTFRYVWSYSGVSLKLAGF 177 Query: 181 GETDDE 186 G + Sbjct: 178 GRVTKD 183 >UniRef50_Q2N5H9 Putative conjugative transfer protein TraE n=5 Tax=Erythrobacter RepID=Q2N5H9_ERYLH Length = 189 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 72/173 (41%), Gaps = 6/173 (3%) Query: 16 AFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMAL 75 F ++ ++ L+ V++ V +++ + P+ + VS DA YL+ + Sbjct: 19 RFAVLAGVLGLTTLVSLGAAVT-----GDEKVVLVPIT-SERITVSSGGVDAPYLELVTR 72 Query: 76 SFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRV 135 + LN + E++D +L+ P + +K L + + + +++ AF + V Sbjct: 73 DTALMFLNRAPESLDYWMANILKLADPASHGVLKADLVKIVEEQRGSDISQAFVIAQIHV 132 Query: 136 WPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDDEKK 188 P+ + G LKT++G + + + + L F + +K+ Sbjct: 133 DPKALTSTVEGTLKTFVGAQVIASQRRAFRFRWSQRGLSLALAGFEQLPTDKE 185 >UniRef50_A7H3G4 Putative conjugative transfer protein TraE n=4 Tax=Campylobacterales RepID=A7H3G4_CAMJD Length = 192 Score = 97.9 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 1/176 (0%) Query: 6 RLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSA 65 + + + F V ++LS + V+ V R +++ + P N F ++ N Sbjct: 7 KNQMDKYIFENITFRIVTLLLSFVILVLIWVILARTDSQKVVFMPPKIVNQEFWIAGNQV 66 Query: 66 DASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVN 125 YL +M LN++ E + LL + P ++K L E+ I ++ ++ Sbjct: 67 SKGYLHEMGQFISFNLLNITKENARNNIDNLLTLVDPKFYQEVKTKLLEQMNYIIDNAIS 126 Query: 126 SAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 FF +++ G++++ GV+K I D + + E G L++ Sbjct: 127 RTFFVSAIDAD-AKGQIKVFGVVKDIISDKVVRSSQSVLKINYIIEQGRFILNDLS 181 >UniRef50_Q1N904 TraE n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N904_9SPHN Length = 189 Score = 93.6 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 53/146 (36%) Query: 43 NEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRP 102 +++ + +S YL+ + L LN S + +D Q++L+ P Sbjct: 40 GKEQEIILSPVIEKQVRISSREVSPEYLEAVTRDMALLVLNRSPDNLDYWRQSILKMADP 99 Query: 103 GAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIK 162 A + L + K + ++ F T + V P+ + G + T IG + + + Sbjct: 100 SAYGAINTELEKVVKAQRGTTLSQYFTMTDMHVDPETLESTVSGHVHTVIGSKEVGAEFR 159 Query: 163 HYILILKRENGVTWLDNFGETDDEKK 188 + L FG+ ++ Sbjct: 160 RFRFAWVNHGMSLKLVAFGQIVKAEE 185 >UniRef50_B2I3Y7 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Y7_ACIBC Length = 192 Score = 89.4 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 9/182 (4%) Query: 7 LSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAP-FAVSQNSA 65 S +R + L+ LS+ N++ +T + P + P + + SA Sbjct: 14 NSRNRSQTYVIFSLIGLLTLSIIANIVLA-------RSGKTIIKPSDNSGPTYILGSTSA 66 Query: 66 DASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVN 125 + Y + I NV+ V + + +L + Q++ L++ +IK + + Sbjct: 67 NKEYYLDFSNYVINYLFNVTPINVSKNFEKILGITCEPSFPQIQKYLSQSEAQIKREGLT 126 Query: 126 SAFFQTSVRVWPQ-YGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETD 184 S + + + + + I G KT++ D + G L + E Sbjct: 127 SVWSSSGAFTFQEADKAITIEGTRKTYLADRLVSEKSQKIQTKFVMSKGTICLYSLNEVK 186 Query: 185 DE 186 DE Sbjct: 187 DE 188 >UniRef50_Q1NGT9 Hypothetical sex pilus assembly and synthesis protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT9_9SPHN Length = 211 Score = 89.0 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 72/197 (36%), Gaps = 22/197 (11%) Query: 3 HGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQ 62 H +S + + ++ L + V+ G+ Y QRT V P V+ Sbjct: 24 HRYLQGSSNLFEENRLLKFSVLGL-FGITVVLGITLYTTSQNQRTIVVPFGAGGDLYVTG 82 Query: 63 NSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKND 122 +YL+ M + +AL S+ + D Q LL + P A N ++ L + N+ Sbjct: 83 GKPSPAYLRTMTRNIVALSGTYSTLSADRQFQELLSIVHPTAYNGIRDSLNAILDELANN 142 Query: 123 NVNS-----------AFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE 171 S + + V + RV I GV++ + G+ + + + Sbjct: 143 PTLSIATYIRPDQPVTWTDRQILVPVEKVRV-IGGVIRKFRGNLR---------IRYTID 192 Query: 172 NGVTWLDNFGETDDEKK 188 G WL + E + + Sbjct: 193 AGRFWLLSLTEESFDAE 209 >UniRef50_Q5NX50 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX50_AZOSE Length = 206 Score = 84.8 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 66/171 (38%), Gaps = 4/171 (2%) Query: 14 AIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQM 73 A + + + + L +++ V + ++ +R + P + + ++A A YL+ Sbjct: 12 AATAMVIVLTVGLVIAIAVGGIAVSRAMEQRERIILIPPYLDRQVQLGWSAASADYLKSF 71 Query: 74 ALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAK--RIKNDNVNSAFFQT 131 + F L NV+ +D Q L ++ ++ L A+ + + + F Sbjct: 72 GMYFTTLAANVTPNNIDFVAQNLELFVDSRIFPDVRRTLKATAENPQFRGTGSSLVFQPN 131 Query: 132 SVRVWPQYGRVEIRGV-LKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 + P+ +V + G K T++ Y L ++ G W+ + Sbjct: 132 EILFEPETMKVFVGGTATHRDAAGRKTDTEM-IYELGVEMRTGRPWITSIE 181 >UniRef50_Q6MBA2 Putative F pilus assembly protein traE n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA2_PARUW Length = 189 Score = 84.8 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 3/177 (1%) Query: 13 MAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQ 72 + + F+ V + L+L + VI V+ + E R + P F V +S A+YL+Q Sbjct: 13 LLVQRNFL-VGLSLTLLMGVILAVSFLCFKTE-RIIIVPSTIEKEFWVDAHSVSATYLEQ 70 Query: 73 MALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTS 132 L L L SS + D L ++ P +K L EE + +K N + F+ + Sbjct: 71 FGLFLGQLLLTKSSYSADLHRNILCRHTEPQYLALLKQRLMEEEETLKKQNASYVFYLNN 130 Query: 133 VRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG-ETDDEKK 188 V V P+ V + G + ++ + + Y L L E D + Sbjct: 131 VHVNPKELTVTLLGDRQFFLAGQQTTLESCGYTLHFNYSGARLLLKGITQEKTDLAR 187 >UniRef50_C1SHE5 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE5_9BACT Length = 185 Score = 82.8 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 1/176 (0%) Query: 9 TSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADAS 68 S + + + IVL+ + + + N +N Q + P AVS + DA+ Sbjct: 10 ASNLFMENRLCKFMTIVLAAVIIIQLWMLNNSFRN-QNAYLIPTGLTTKAAVSGHFLDAN 68 Query: 69 YLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAF 128 Y+Q M + L N + +TV ++ L + L A ++ ++ F Sbjct: 69 YVQAMGVYVSQLLYNFTPQTVANQYKELASLFSADCYQENSNKLISMANAYADNEISMVF 128 Query: 129 FQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETD 184 ++ + Q +EI G I + ++ NG+ + E Sbjct: 129 RVMEIKSFTQPNVIEISGETSKTILGENVQSFKASLLVYYDVFNGLFRITAIEEKQ 184 >UniRef50_C4YZZ8 Putative uncharacterized protein n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YZZ8_9RICK Length = 220 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 64/165 (38%), Gaps = 3/165 (1%) Query: 22 VLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALR 81 + ++L+L ++ I +L + + + + Q SY+++++L ++++ Sbjct: 19 LFLILTLMLSFICCGLTLKLITTRDKTILVPGLSQEVWLGQGRVSESYIEEVSLMYLSML 78 Query: 82 LNVSSETVDASHQALLQYIRPG---AQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQ 138 L+++ + V + +YI +++ + ++ K +++ F S+ V Sbjct: 79 LDLNKDVVGYKEALISKYISHSSSKYMKEIRQYFSHVKEQYKQFGLSTYFAVKSLEVNSS 138 Query: 139 YGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 V +GVL T GD Y L L F Sbjct: 139 DNSVIAKGVLTTKFGDHGIDVKETSYFLSYDLVGSTLRLKEFHHI 183 >UniRef50_A2PNK5 Sex pilus assembly n=17 Tax=Gammaproteobacteria RepID=A2PNK5_VIBCH Length = 208 Score = 72.8 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 5/170 (2%) Query: 22 VLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALR 81 LI + + N++ V A+ P + VS+N A YL+ L L Sbjct: 22 FLIAVLVLSNLLLAVAA--FSRNTVVAIQPPTLSETAEVSRNQATQPYLESWGLYLAELM 79 Query: 82 LNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGR 141 NV+ V A+ + P Q+ L +A++I+ D V F V + G Sbjct: 80 GNVTPGNVSFIRVAIEPLLSPAVYQQVVDALEIQARQIREDRVTLKFQPRQVEYEYETGH 139 Query: 142 VEIRGVLKTWIGDSKPFTDIKHYILILK---RENGVTWLDNFGETDDEKK 188 V + G + Y + ++W+D + K+ Sbjct: 140 VFVTGYSLVSGPSGDEQRQTRTYEFDIDIDQYRPKLSWMDTYEGQARTKR 189 >UniRef50_A4JTP4 Sex pilus assembly protein n=2 Tax=Burkholderiales RepID=A4JTP4_BURVG Length = 235 Score = 72.4 bits (176), Expect = 7e-12, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 68/164 (41%), Gaps = 7/164 (4%) Query: 20 MSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIA 79 ++L + +++ L + T + P +V ++AD YL+ + L Sbjct: 18 GAMLFSNVILASLLAASMVGNLSRHETTRLVPPYLAKAVSVGWDTADVEYLEGIGLYVAT 77 Query: 80 LRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAK--RIKNDNVNSAFFQTSVRVWP 137 L NV+ + V+ L Q + P ++ + A+ ++ + F T V Sbjct: 78 LTANVTPKNVNFVADRLSQLLTPRVYQGVRQQILALAQDPVFNSNGGSVRFEATKVVSEK 137 Query: 138 QYGRVEIRGVLKTWIGDSKPFTDIKHYILILKR--ENGVTWLDN 179 + +V + G + T +S+ D K ++ +K ++G W+D+ Sbjct: 138 ETQKVYVIGQMTTQSVNSR---DTKSAVIEMKIVMKDGRPWVDS 178 >UniRef50_Q3IUW8 Putative uncharacterized protein traE n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW8_RHOS4 Length = 184 Score = 72.0 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 68/181 (37%), Gaps = 3/181 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + A +++++ +S++ N++ Q + + P + V Sbjct: 1 MDFATLSRRMKGAQRARNVVTLMLGVSIAANLLL--TWRISQENTQVVLIPSRVSDGM-V 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 ++ +AD Y++ ++L + VS T+ + + + ++ + A IK Sbjct: 58 ARGAADVRYIEALSLDAVYAMYTVSPATIRYGRDVIERISAAEDRARLLDAYDDIADDIK 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +++ F + ++ + G+L T++ ++ + +L E L Sbjct: 118 LRRISTVFRPEKIEHNLPRLQIVVEGMLSTYLDTTEVSAQRRRIMLTFIEEGSSIRLSRM 177 Query: 181 G 181 Sbjct: 178 E 178 >UniRef50_Q19NT0 TrhE n=10 Tax=Enterobacteriaceae RepID=Q19NT0_ECOK1 Length = 262 Score = 69.0 bits (167), Expect = 7e-11, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 3/154 (1%) Query: 26 LSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVS 85 +S++V + + T VTP N V N A SY Q AL F L N++ Sbjct: 74 VSIAVIGLLVAKILFF-TDPVTIVTPPNMNEEITVVGNKASESYKTQWALFFSTLLGNIN 132 Query: 86 SETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIR 145 + +L + P Q + L E+ ++ V F + P+ V + Sbjct: 133 PTNISFVTAYVLDALSPELQAKTSESLQEQINIMQARGVEQTFKPNDIYFDPKNDMVYVW 192 Query: 146 GVLKTWIGDS--KPFTDIKHYILILKRENGVTWL 177 G T + + K + Y +L +NG + Sbjct: 193 GTKTTRLVNVPDKTESSKWTYEWVLGMKNGRPRI 226 >UniRef50_C4NVT6 TraE n=10 Tax=Gammaproteobacteria RepID=C4NVT6_ECOLX Length = 208 Score = 68.2 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 55/149 (36%) Query: 24 IVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLN 83 I + ++ + E + P V++++A SY + +F L N Sbjct: 22 IFQGGLIAIVFLLVVQVFSKETIVTIQPFTLTEEAWVTKSNASQSYKEAWGFAFAQLLGN 81 Query: 84 VSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVE 143 V+ TVD + + + P + + +A++IKND V F V P+ +V Sbjct: 82 VTPGTVDFVKERITPLLSPSIYQDVIDAIEIQAQQIKNDRVTMRFEPRFVEYEPKSDKVF 141 Query: 144 IRGVLKTWIGDSKPFTDIKHYILILKREN 172 + G S + Y +K N Sbjct: 142 VYGYSYVKGASSNEERSERSYEFAIKISN 170 >UniRef50_D2U0R4 Conjugative transfer pilus assembly protein TraE n=1 Tax=Arsenophonus nasoniae RepID=D2U0R4_9ENTR Length = 184 Score = 66.3 bits (160), Expect = 5e-10, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 1/132 (0%) Query: 38 NYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALL 97 ++R + P V N +Y++ A L N + + ++L Sbjct: 3 ILIFSKDERIIIVPPNLTTTSWVDANEGSTAYMRSWAGYIATLLGNTNPSSAPFIKESLE 62 Query: 98 QYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWP-QYGRVEIRGVLKTWIGDSK 156 ++ P + + + +E +I+ D V+ +F T + P G + G + K Sbjct: 63 PFLAPTNRGAIMQTIDDETGKIRRDRVSVSFSPTKISSDPMAKGTYFVEGTQEIKSITGK 122 Query: 157 PFTDIKHYILIL 168 + YI+ + Sbjct: 123 AVSHSVTYIVTV 134 >UniRef50_B0RL16 Hypothetical sex pilus assembly and synthesis protein n=2 Tax=Yersinia RepID=B0RL16_YEREN Length = 216 Score = 65.9 bits (159), Expect = 6e-10, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 25/180 (13%) Query: 25 VLSLSVNVIQGVNNYRLQN---EQRTAVTPM--AFNAPFAVSQNSADASYLQQMALSFIA 79 + ++ V+ + Y + N + + P + F V+ +A SY+ +MA A Sbjct: 37 FILYAILVLTALTYYEVSNSADNAKIVIAPFASVDSGDFWVTGTTASESYVNRMAKLVTA 96 Query: 80 LRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQY 139 VS TV S+ +LL + P M+ E K++ + F T + Sbjct: 97 YYGTVSPTTVKNSNASLLAMVHPTRSEAMRKKFNEREKKV--TQFTTVSFITELNPEKPI 154 Query: 140 G------------------RVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 R+EI + IG++ + Y + E+ WL + Sbjct: 155 QVTTNPEVEYKEHGSLPVYRMEIPVTKRKIIGETSTNPETAKYTVDYTIESNQFWLLDIT 214 >UniRef50_B7J827 Type IV conjugative transfer system protein TraE n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J827_ACIF2 Length = 204 Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 1/161 (0%) Query: 21 SVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIAL 80 + LIV+ + V+ + + R + P + + SADA Y + L L Sbjct: 19 AFLIVIGVLAVVVLMQQWAIVTEKTRMVLVPPYIDKAVKIGYASADADYYESWGLYVSEL 78 Query: 81 RLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYG 140 N++ +A+ + + +K +A+ A N + AF SV Q G Sbjct: 79 MGNLTPGDAPFVEKAMGKLFSSVSYEGVKSRIAQSAAEEANADATFAFEAKSVIWQSQTG 138 Query: 141 RVEIRGVLKTWIG-DSKPFTDIKHYILILKRENGVTWLDNF 180 V + G L+ G + + + G LD+F Sbjct: 139 TVFVHGTLRQVNGAGRTISATPFTFSMRVHIAAGRPVLDDF 179 >UniRef50_C0QUX4 Type IV conjugative transfer system protein TraE n=1 Tax=Persephonella marina EX-H1 RepID=C0QUX4_PERMH Length = 175 Score = 64.7 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 61/182 (33%), Gaps = 12/182 (6%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M++ R S +F+ L + + + Y P Sbjct: 1 MKYIERWSELYRKNAILLFVVFLQAVLIV--FLLTAVLYLAVKRTAVIAIPPTGTQIAT- 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYI-RPGAQNQMKVILAEEAKRI 119 ++ +I L +N S +D L +I P A+ L EA+ I Sbjct: 58 ----GSETHRLLWGRYYIDLLMNFSKNDIDNRLNILFTFIQNPKARE----RLIREAEEI 109 Query: 120 KNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 K +++ F Q G V ++G +K WIG + + + L+ + L++ Sbjct: 110 KKNDIVQVFIPYESTWKVQGGVVSVKGHIKRWIGTTLVRDEDVLVKVKLRPSGSIIALED 169 Query: 180 FG 181 + Sbjct: 170 WK 171 >UniRef50_C1MEK1 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEK1_9ENTR Length = 208 Score = 64.0 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 62/163 (38%), Gaps = 8/163 (4%) Query: 28 LSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSE 87 + N++ G L Q + P + + +A +SY++ AL N + Sbjct: 28 ILANLVLGYAL--LAKTQPITIIPPNLTETAWLDEKAASSSYMKAWALYIADSFGNANPT 85 Query: 88 TVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQY-GRVEIRG 146 T+D ++ ++ ++ + ++ +IK D ++ +F V P G + G Sbjct: 86 TLDLLKNSIGPFLDASIYTKVMKAMDDQIDQIKRDRISLSFNPVGVITDPLAVGTFYVTG 145 Query: 147 --VLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDDEK 187 L+ G KP T +Y + + G + F E K Sbjct: 146 NQTLEGITG--KPSTTPVYYEITVN-VKGYRPIITFIEIKSGK 185 >UniRef50_B7XGQ5 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGQ5_PSEPU Length = 212 Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 6/163 (3%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F+ + + + N++ + L ++ V P VS+ + Y AL Sbjct: 19 FLRIAVAGLVLSNLLVSCSA--LNKDEVVTVIPPTLTETAWVSKTQSSGEYADAWALYIA 76 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSV---RV 135 + NV+ AL + +L + +I+ D V +F V + Sbjct: 77 MMLGNVTPHNASVVKDALGPILDKAIYQDTMKVLDTQIHQIRQDRVTLSFEPQKVLRDNL 136 Query: 136 WPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILK-RENGVTWL 177 V R V + GD K + L++K + ++WL Sbjct: 137 NENKFYVTGRSVSEGPAGDKKRSNRTYEFELVIKDYKPVLSWL 179 >UniRef50_Q8L278 Pilus biogenesis protein n=1 Tax=Proteus vulgaris RepID=Q8L278_PROVU Length = 205 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 39/97 (40%) Query: 41 LQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYI 100 + Q + P + +++A A Y+ A+ N + +V+ +++ ++ Sbjct: 39 MSRSQVVTIVPPNLTQTAWLDEHAASAPYMSAWAVYVAQSLGNANPSSVNMVKESIGPFL 98 Query: 101 RPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWP 137 N+M + ++ +IK D ++ F V P Sbjct: 99 DAKIYNEMMKRIDDQIDQIKRDRISLYFTPNRVITDP 135 >UniRef50_A8F1T1 Conjugative transfer protein TraE n=26 Tax=Rickettsieae RepID=A8F1T1_RICM5 Length = 184 Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 6/148 (4%) Query: 43 NEQRTAVTP-MAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIR 101 E++ + P M + VS S +YL++ A+ + S E V+ + + Sbjct: 41 TEEKWLLIPAMEPDRRMIVSSKSYHETYLKEWAVFVMKELFTTSPEEVERQIADMK--VV 98 Query: 102 PGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDI 161 Q+ E +K N++S FF V+V V I G + W ++K Sbjct: 99 SSNTEQLDKFFKEHLDFVKGSNISSVFFPKKVKVIADG--VLINGTFRYWFSENKHVATD 156 Query: 162 KHYILILKR-ENGVTWLDNFGETDDEKK 188 K Y+L KR N + L E + K+ Sbjct: 157 KTYLLTYKRGANHLLLLTGIKEEEVNKQ 184 >UniRef50_A0L344 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L344_SHESA Length = 218 Score = 45.1 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 3/145 (2%) Query: 26 LSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVS 85 L+LS++V+ + + + V P F P ++ NS + Q L + N++ Sbjct: 26 LALSISVVL-LLFMVMTKQTEVIVMPNDFKEPIVMNGNSVTQEFKIQWGLMIATIIGNIT 84 Query: 86 SETVDASHQALLQYIRPGAQN-QMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEI 144 + + + I + + +A + + V+ F + V + Sbjct: 85 PKNAKFVIDRVTKMIPLELNPDEAEATMAAAIEEMALRGVSQKFVPSDAIYSSVTDYVWV 144 Query: 145 RGVLKTWIGDSKPFTDIKHYILILK 169 G +T I D Y LK Sbjct: 145 VGE-QTTISLKTGAADTTAYTFELK 168 >UniRef50_A4V6Q7 Putative transmembrane protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V6Q7_PSEFS Length = 210 Score = 42.8 bits (99), Expect = 0.006, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 10/158 (6%) Query: 9 TSRVMAIAFIFMSVLIVLSLS--VNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSAD 66 + + +AFI ++V++ + +N + + ++ + + + VS+N Sbjct: 21 RASRINVAFIAVTVILTGVIVYLINWNNHLQDVNVELQGQRVMYGYPNAEGVFVSENEVP 80 Query: 67 ASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNS 126 ++ F+ N + ++ ++ L+ + P + + L AK+ + Sbjct: 81 ERHIIAFTSVFLDNFYNFTPDSSFSNANEALRLMSPRFRAVQEETLKLVAKQSSEQQITQ 140 Query: 127 AF---FQTSVRVWPQYGRVEI-----RGVLKTWIGDSK 156 F + PQ V R L T G +K Sbjct: 141 VFVRTSPYKIETTPQGYIVTFQALRYRATLNTVFGKAK 178 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P10514 Protein traE n=48 Tax=root RepID=TRAE2_ECOLX 191 1e-47 UniRef50_P12057 Protein traE n=8 Tax=Gammaproteobacteria RepID=T... 171 8e-42 UniRef50_B6ICF2 TraE protein n=1 Tax=Escherichia coli SE11 RepID... 168 8e-41 UniRef50_Q7MBN7 Putative conjugative transfer protein TraE n=4 T... 163 2e-39 UniRef50_Q47DN0 Plasmid-like conjugative transfer protein TraE n... 163 3e-39 UniRef50_A8QYP7 TraE protein n=2 Tax=Legionellaceae RepID=A8QYP7... 159 7e-38 UniRef50_A9L6K5 Type IV conjugative transfer system protein TraE... 157 2e-37 UniRef50_UPI00016ACDC8 hypothetical protein Bpse38_32205 n=1 Tax... 153 3e-36 UniRef50_A0B4M7 Putative uncharacterized protein n=3 Tax=Burkhol... 151 1e-35 UniRef50_A4WGS2 TraE family protein n=1 Tax=Enterobacter sp. 638... 150 2e-35 UniRef50_Q1MXI2 Plasmid-like conjugative transfer protein TraE n... 150 2e-35 UniRef50_A1AKM2 Conserved hypothetical sex pilus assembly and sy... 150 2e-35 UniRef50_A1WDF9 Putative uncharacterized protein n=1 Tax=Acidovo... 149 4e-35 UniRef50_B2VB07 TraE protein n=1 Tax=Erwinia tasmaniensis RepID=... 149 5e-35 UniRef50_A4XE91 TraE family protein n=5 Tax=Sphingomonadaceae Re... 149 6e-35 UniRef50_A5KZF3 Sex pilus assembly and synthesis protein TraE n=... 146 3e-34 UniRef50_Q0F358 Plasmid-like conjugative transfer protein TraE n... 146 4e-34 UniRef50_B6ESX5 Conjugative transfer protein TraE n=2 Tax=Vibrio... 146 4e-34 UniRef50_Q8D6A3 Putative uncharacterized protein n=1 Tax=Vibrio ... 144 1e-33 UniRef50_Q2LTZ4 Hypothetical sex pilus assembly and synthesis pr... 144 1e-33 UniRef50_C9NPU8 Putative conjugative transfer protein TraE n=1 T... 144 2e-33 UniRef50_A0R7R2 Conserved hypothetical sex pilus assembly and sy... 143 3e-33 UniRef50_Q5ZTS0 Putative conjugative transfer protein TraE n=1 T... 143 4e-33 UniRef50_C5SIK2 Putative uncharacterized protein n=1 Tax=Asticca... 140 2e-32 UniRef50_B4RLS3 TraE n=10 Tax=Neisseria RepID=B4RLS3_NEIG2 140 3e-32 UniRef50_Q5WSC2 Putative uncharacterized protein n=2 Tax=Legione... 139 7e-32 UniRef50_Q2N5H9 Putative conjugative transfer protein TraE n=5 T... 137 2e-31 UniRef50_B4EQI4 Putative TraE conjugative transfer protein n=1 T... 137 3e-31 UniRef50_A3VN26 Putative uncharacterized protein n=1 Tax=Parvula... 135 7e-31 UniRef50_D0SGY9 Putative uncharacterized protein n=1 Tax=Acineto... 134 2e-30 UniRef50_C8QE98 TraE family protein n=2 Tax=Pantoea sp. At-9b Re... 133 3e-30 UniRef50_D2U003 Conjugal transfer pilus assembly protein TraE n=... 132 7e-30 UniRef50_A7H3G4 Putative conjugative transfer protein TraE n=4 T... 130 3e-29 UniRef50_A2PNK5 Sex pilus assembly n=17 Tax=Gammaproteobacteria ... 129 3e-29 UniRef50_Q5NX50 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 129 4e-29 UniRef50_Q1N904 TraE n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N904... 128 1e-28 UniRef50_B7J827 Type IV conjugative transfer system protein TraE... 127 1e-28 UniRef50_C1SHE5 Putative uncharacterized protein n=1 Tax=Denitro... 127 2e-28 UniRef50_C4NVT6 TraE n=10 Tax=Gammaproteobacteria RepID=C4NVT6_E... 124 1e-27 UniRef50_Q6MBA2 Putative F pilus assembly protein traE n=2 Tax=C... 122 7e-27 UniRef50_Q1NGT9 Hypothetical sex pilus assembly and synthesis pr... 120 2e-26 UniRef50_Q19NT0 TrhE n=10 Tax=Enterobacteriaceae RepID=Q19NT0_ECOK1 118 1e-25 UniRef50_B2I3Y7 Putative uncharacterized protein n=1 Tax=Acineto... 117 2e-25 UniRef50_B7XGQ5 Putative pilus assembly protein n=2 Tax=Pseudomo... 116 5e-25 UniRef50_C1MEK1 Pilus biogenesis protein n=1 Tax=Citrobacter sp.... 115 6e-25 UniRef50_C4YZZ8 Putative uncharacterized protein n=1 Tax=Rickett... 115 9e-25 UniRef50_C0QUX4 Type IV conjugative transfer system protein TraE... 115 1e-24 UniRef50_A4JTP4 Sex pilus assembly protein n=2 Tax=Burkholderial... 114 1e-24 UniRef50_D2U0R4 Conjugative transfer pilus assembly protein TraE... 109 4e-23 UniRef50_Q8L278 Pilus biogenesis protein n=1 Tax=Proteus vulgari... 108 7e-23 UniRef50_Q3IUW8 Putative uncharacterized protein traE n=1 Tax=Rh... 108 1e-22 UniRef50_Q2NQ47 Putative TraE n=1 Tax=Sodalis glossinidius str. ... 105 1e-21 UniRef50_A8F1T1 Conjugative transfer protein TraE n=26 Tax=Ricke... 102 1e-20 UniRef50_A0L344 Putative uncharacterized protein n=1 Tax=Shewane... 97 3e-19 UniRef50_B0RL16 Hypothetical sex pilus assembly and synthesis pr... 90 2e-17 Sequences not found previously or not previously below threshold: UniRef50_A9AU16 Putative uncharacterized protein n=1 Tax=Burkhol... 60 4e-08 UniRef50_A4V6Q7 Putative transmembrane protein n=1 Tax=Pseudomon... 47 4e-04 UniRef50_A5CCQ0 Conjugative transfer protein n=8 Tax=Rickettsiea... 46 8e-04 >UniRef50_P10514 Protein traE n=48 Tax=root RepID=TRAE2_ECOLX Length = 188 Score = 191 bits (484), Expect = 1e-47, Method: Composition-based stats. Identities = 185/188 (98%), Positives = 185/188 (98%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPM FN PFAV Sbjct: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMGFNVPFAV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK Sbjct: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 NDNVNSAFFQTSVRVWPQYGRVEI GVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF Sbjct: 121 NDNVNSAFFQTSVRVWPQYGRVEIHGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 Query: 181 GETDDEKK 188 GETDDEKK Sbjct: 181 GETDDEKK 188 >UniRef50_P12057 Protein traE n=8 Tax=Gammaproteobacteria RepID=TRAE1_SALTI Length = 187 Score = 171 bits (434), Expect = 8e-42, Method: Composition-based stats. Identities = 85/187 (45%), Positives = 123/187 (65%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 ME AR S+++++A+ + ++ L+ + V N L +EQRT VTPM +NAPF V Sbjct: 1 MEISARNSSTKIIAVIILSLTTLVFILGFAVAWLAVTNRALIHEQRTVVTPMTYNAPFVV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+ AD Y + M LSF+ALRLNVS ETVD++H L+ ++ P A+ + K +L EEA +IK Sbjct: 61 SETKADTEYFRMMTLSFLALRLNVSPETVDSNHAFLMSFVEPEAREEFKKVLQEEAAQIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 ++VNS F+ T + V+P GR+++RGVLK WIG+S+P T+IK Y L LK G T + F Sbjct: 121 ANDVNSTFYTTEINVYPVDGRIDVRGVLKMWIGNSRPSTEIKTYRLRLKYTGGFTRIGRF 180 Query: 181 GETDDEK 187 E +EK Sbjct: 181 YEVTNEK 187 >UniRef50_B6ICF2 TraE protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF2_ECOSE Length = 192 Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats. Identities = 81/188 (43%), Positives = 117/188 (62%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ A S + ++ F+ + + LSLS NV+ + L+ Q+ PM FN PF++ Sbjct: 1 MDLSAHRSALKFTSLTFVILLFFLGLSLSANVLAWLRIEDLERGQKETYIPMFFNQPFSL 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+N ADASYLQQ+A S + LRLNV+ E++ A HQALL+Y A+ QMK IL EA +I Sbjct: 61 SRNVADASYLQQVAESLMFLRLNVTPESIKAQHQALLRYFDTAARPQMKAILDAEASQII 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +NV+SAF+ T + V+PQ G V+ RG LKTWIG + + K Y L L +G+T + +F Sbjct: 121 TNNVSSAFYMTGIDVYPQAGVVDFRGTLKTWIGKREALPEEKAYRLELGYRDGMTTIRSF 180 Query: 181 GETDDEKK 188 E +EK+ Sbjct: 181 KELVNEKE 188 >UniRef50_Q7MBN7 Putative conjugative transfer protein TraE n=4 Tax=Vibrionales RepID=Q7MBN7_VIBVY Length = 200 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 84/184 (45%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + + ++ + + L N++ G +Y+ Q + P + F V Sbjct: 10 MDPYIKRDRLAIKSLLNFLLVAGFLAMLITNLVLGYTSYQALTHQSRTLIPPTISKAFTV 69 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S + D YL+QMA + L+LNV+ V LL+Y+ + N ++ L EA IK Sbjct: 70 SDGAVDEPYLEQMADYLLYLKLNVTPANVSRQFGQLLEYVDAQSWNSVQPKLLREATVIK 129 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 DN++S F S+R+ +V++ G L+ ++G ++K Y + E G L + Sbjct: 130 KDNISSQFSVDSIRISLDTLQVQLYGKLQKYVGRRALEPEMKWYQVSFSYEQGSIGLLSI 189 Query: 181 GETD 184 E + Sbjct: 190 EEVE 193 >UniRef50_Q47DN0 Plasmid-like conjugative transfer protein TraE n=5 Tax=Betaproteobacteria RepID=Q47DN0_DECAR Length = 188 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 76/185 (41%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + M + + + + + ++ + L RT V P + + F V Sbjct: 1 MDFERLNGDIKEMRRRNRGLGLAVGVLAAGQILALIVILNLLGTVRTVVVPPSIDKTFWV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 +++ A YL+QM L L+V+ ++D + LL Y+ P +K EA+R+K Sbjct: 61 TRDKASNEYLEQMGSFIAWLVLDVTPASIDWKKEILLGYVEPEQYGPLKTRQEVEAERLK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 N + F + + V IRG L+T + + D+K Y + L +F Sbjct: 121 RINAATVFAPQQLVPSEEGQSVVIRGRLRTVVNGFETANDLKAYRVEFNYAGARMHLKSF 180 Query: 181 GETDD 185 E + Sbjct: 181 KEVAN 185 >UniRef50_A8QYP7 TraE protein n=2 Tax=Legionellaceae RepID=A8QYP7_9GAMM Length = 189 Score = 159 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 85/185 (45%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + S ++ F M VL+ L NV+ + N VTP + N + Sbjct: 1 MDFKSYQSRLSQLSARFNLMVVLVFGLLVSNVLLSCFLNKAWNHHTIEVTPFSGNPGYFK 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S D YL MA +F+ RLNV+ ETVDA+H+ LL ++ Q+ +L EAK IK Sbjct: 61 SATRVDGHYLSLMAENFVNERLNVTPETVDANHKRLLSFVNHQKYTQILRLLTNEAKVIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 ++S F T ++ P + GVLK ++G + K Y+L + ++ + F Sbjct: 121 AKKMSSTFDITEIKTNPNQLTAVVSGVLKRYVGLQSLSDERKTYLLQFQYKDSRLSIIKF 180 Query: 181 GETDD 185 D Sbjct: 181 SPFKD 185 >UniRef50_A9L6K5 Type IV conjugative transfer system protein TraE n=6 Tax=Shewanella baltica RepID=A9L6K5_SHEB9 Length = 188 Score = 157 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 84/188 (44%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M ++ R+ + + +++ N + + + V P +A F V Sbjct: 1 MLQKNKIDFIRIAKSLNTLLLIGFTVAMISNTVLASIVWMAYFNKSRTVVPPTISAAFTV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S S D YLQQM+ F L+LNV+ +VD ++ L YI + M+ +L +EA IK Sbjct: 61 SDTSIDEPYLQQMSEYFAFLKLNVTPASVDHQYKQLASYIDEADWHVMQPLLVDEAAMIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 N++S F ++ +V V+I G L ++G+ + YI+ + ++G L Sbjct: 121 KQNISSHFTISTSQVALDDRLVKITGTLNKYVGNRALEPETISYIIAMNYDHGQLSLKAI 180 Query: 181 GETDDEKK 188 + + K Sbjct: 181 KKVQKDVK 188 >UniRef50_UPI00016ACDC8 hypothetical protein Bpse38_32205 n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDC8 Length = 196 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 2/185 (1%) Query: 5 ARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNS 64 A+ ++ F +I NV+ + T + P P+ + Sbjct: 6 AKNERDKLTDTIR-FHRKIISGQAIANVLLALLVGWTVLHDTTRIVPPEVKRPYQIGAGQ 64 Query: 65 ADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNV 124 AD YL M+ ++L L + ETVD ++ LL+ + P K A RIK + + Sbjct: 65 ADQDYLSDMSGYVLSLILTSTPETVDYNNSILLKLVEPDQYPVYKTRFDAAAIRIKREKI 124 Query: 125 NSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE-NGVTWLDNFGET 183 + + S +++ + RV +G LKT+IGD T Y++ L +G T++ E Sbjct: 125 TTIWSPQSQQIFVEAKRVIWKGTLKTYIGDQPVSTLPHTYVVELPISFSGRTYVRKAEEV 184 Query: 184 DDEKK 188 D + Sbjct: 185 LDSTR 189 >UniRef50_A0B4M7 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=A0B4M7_BURCH Length = 203 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 3/187 (1%) Query: 4 GARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQN 63 A S ++ + VL+ + +V+ + L QR + P A + + Sbjct: 5 KAAQSREQLQSENRFLKKVLLGNG-TTSVVIALTCAWLVITQRVIIMPPAVRGTYVIGAR 63 Query: 64 SADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDN 123 A+ YL A +AL +V+ TVD + + LL + + +K +A +IK+D Sbjct: 64 YANDQYLADQAAYVLALSKSVTPTTVDNNVRILLSMVDDDRRAALKTEWEADALQIKHDG 123 Query: 124 VNSAFFQTSV-RVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE-NGVTWLDNFG 181 V + F V V + V++ G L T+I + ++ K Y + G L + Sbjct: 124 VTNVFEPMGVGEVDFRNKAVKVTGTLTTYISGKRTSSEQKTYEVYFGITVFGRLVLLDIR 183 Query: 182 ETDDEKK 188 E K+ Sbjct: 184 EATRGKQ 190 >UniRef50_A4WGS2 TraE family protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS2_ENT38 Length = 193 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 5/189 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 ME + + ++ AFI + L+VLS + NV+ G + Q+T TPM +N PF Sbjct: 1 MELKIKGERDKQLSYAFIGLVSLLVLSGTGNVLTGSLAWYFATTQKTVTTPMTYNQPFTS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 SADAS + A SFI RLNVS E +D + + LL ++ ++ ++ L EA+RIK Sbjct: 61 DAVSADASGMTMFASSFIYWRLNVSPENIDNNQKMLLGFVPSTERDLLRKALDVEAERIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPF----TDIKHYILILKRENGVTW 176 + + F +RV G VE G LK+ + K Y L + +NG+ Sbjct: 121 KGGITTRFDTKDIRVMTD-GSVEFSGTLKSATTNGAITTPLKDQDKTYRLNISYQNGLVN 179 Query: 177 LDNFGETDD 185 L +F E Sbjct: 180 LHSFEELQP 188 >UniRef50_Q1MXI2 Plasmid-like conjugative transfer protein TraE n=1 Tax=Bermanella marisrubri RepID=Q1MXI2_9GAMM Length = 194 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 83/184 (45%), Gaps = 3/184 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M S M ++ +F + L L + NV+ ++T + P+ F + F V Sbjct: 1 MNRDVYKSVIAQMNVSRLFWASLSSLLIVSNVLLAYFVVTADTSEKTTLVPIGFESEFWV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 D YL+QM+L F+ L + V++ + +L+Y+ P A ++ EA+RI+ Sbjct: 61 HNEEVDPEYLEQMSLFFLDLYTDYHPSNVESRFKMILKYVEPSAHGLLERRFDSEAQRIR 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTD-IKHYILILKRENGVTWLDN 179 N +++S F +++++ + V + G+L+ + D + + + ++G ++ Sbjct: 121 NSSLSSTFHPSAIKI--RETTVFVHGILQGLVAGKATDPDLDAVFRIDFEHDHGRLFIKT 178 Query: 180 FGET 183 Sbjct: 179 IERV 182 >UniRef50_A1AKM2 Conserved hypothetical sex pilus assembly and synthesis protein n=2 Tax=Desulfuromonadales RepID=A1AKM2_PELPD Length = 192 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 1/178 (0%) Query: 6 RLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSA 65 +S + A + V++VL ++V + + N QR + P A N+ ++S + A Sbjct: 7 LQKSSNIFAENRLLKFVVVVLGIAVAINTAGL-FIALNSQRVILVPPAINSKISISGDKA 65 Query: 66 DASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVN 125 YL++ + L L + + LL P + L E A +I+N + Sbjct: 66 SEEYLKEFTRYILNLALTYNPVNARSQFSELLAVYDPAEFQATRKELYELADKIENTQAS 125 Query: 126 SAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 SAF+ S+ + R+E+ G KT++ D K K Y++ + ENG L E Sbjct: 126 SAFYIHSIINDTEKRRLEVTGTKKTYMVDQKAEDTQKVYLIEYRFENGKFILVRLYEK 183 >UniRef50_A1WDF9 Putative uncharacterized protein n=1 Tax=Acidovorax sp. JS42 RepID=A1WDF9_ACISJ Length = 197 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 2/183 (1%) Query: 4 GARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQN 63 A ++ + F + L + + T + P P+ + N Sbjct: 5 KAINERDKLQSQVR-FHRAMNAGLLGTLFFGVLLLGFVVVRDTTKIVPPEVKRPYEIGSN 63 Query: 64 SADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDN 123 A+ YL MA + L V+ ETVD +++ +L+ P +K L A R+K + Sbjct: 64 YANKDYLLDMAGYVLGTVLTVTPETVDYNNKVILKMADPDGYAGLKTALDAAAMRLKQER 123 Query: 124 VNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKR-ENGVTWLDNFGE 182 V + + V Q RV++ G LKT+I D K Y++ +G ++ E Sbjct: 124 VTTIWVPRKEEVSEQDKRVKVSGKLKTFIADKLTSEREKDYLVEFTITTSGRLYVSKIEE 183 Query: 183 TDD 185 Sbjct: 184 IVK 186 >UniRef50_B2VB07 TraE protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB07_ERWT9 Length = 188 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 2/188 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + + A+AF+ M+ L+ SL +V ++ N Q PM F+ PF Sbjct: 1 MKLSTKKDIDKRTAVAFLAMAGLLSASLLTSVGAIGLAWKFHNTQERITVPMGFDKPFVS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S DA+ + + ++LRLNV+ ET+D + LL Y + ++K L EA I Sbjct: 61 SNQRGDANLNSMLVRALVSLRLNVTPETIDPQQKELLSYTDSENRAELKRALEVEADYIH 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVL--KTWIGDSKPFTDIKHYILILKRENGVTWLD 178 ++V++ F P+ E+ G T G K KHYI+ + NG+ L+ Sbjct: 121 KNDVSAQFLIEKFDYNPETNDTEVAGQQLASTSGGKLKLPDSSKHYIVNVSYVNGMVKLN 180 Query: 179 NFGETDDE 186 F E Sbjct: 181 KFTEVLPN 188 >UniRef50_A4XE91 TraE family protein n=5 Tax=Sphingomonadaceae RepID=A4XE91_NOVAD Length = 207 Score = 149 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 3/186 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ ++ + +++ +++V+ + + R V P + Sbjct: 1 MDLSISHGQAQRLLKQRNLLAITATGLFALSVVL---TFTAAHRDREVVLQPVLAKPLTL 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S + D YL+ + L LN S + ++L P +MK L + Sbjct: 58 SSSHIDKDYLELVTRDAALLTLNRSPSNLQYWMDSILAITDPRTHGRMKAELMKIFNEQN 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 NV+ F ++ V P+ E+ GVL T +G + ++ + + + L F Sbjct: 118 GSNVSQFFTIENLSVDPEALTSEVNGVLHTVVGSKEVTSEARTFRYVWSYSGVSLKLAGF 177 Query: 181 GETDDE 186 G + Sbjct: 178 GRVTKD 183 >UniRef50_A5KZF3 Sex pilus assembly and synthesis protein TraE n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZF3_9GAMM Length = 186 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 3/184 (1%) Query: 2 EHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVS 61 +G L +R + ++ +V+++ +L V + + Q E+RT P + F +S Sbjct: 5 HNGEALKAARFL--NYVLTAVVLITALGVAGLSFALLSQSQAEKRTV-VPPHIDRAFTIS 61 Query: 62 QNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKN 121 ++ D +YL MA +I L+ NV+ V L+ Y+ P + ++ L EA+ I Sbjct: 62 SDAVDEAYLSMMADWWIHLKFNVTPSNVKRQFNLLITYVPPKYWSGLQDKLIREAEFIIE 121 Query: 122 DNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 ++V S F ++ + ++ ++G L I + Y+L +G+ L + Sbjct: 122 NDVTSFFEVDTLSISLNEMKIRVKGTLNKTIAGRALDPEPVSYLLQADYSSGLIELHSIV 181 Query: 182 ETDD 185 + Sbjct: 182 QEVP 185 >UniRef50_Q0F358 Plasmid-like conjugative transfer protein TraE n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F358_9PROT Length = 194 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 5/179 (2%) Query: 2 EHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVS 61 + RL++ A + S+ + L + V ++ + R++ P F VS Sbjct: 8 DGIERLASEVRFLRAALLGSIAVALLMLVRLLTAPTDIRME-----VAAPPTVAKDFWVS 62 Query: 62 QNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKN 121 + SYL+QM + LN + ++ + L Y+ P A +++ L + +R Sbjct: 63 TSDFSPSYLEQMGTFIAYMMLNATPASLKFQAEQLKPYLIPEAYGELQSELEAKRERFDR 122 Query: 122 DNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +++ F+ + + R+++ G LKT+IG + + + K NG ++ + Sbjct: 123 YQMSTMFYPNQIYLSKSRCRIQVEGELKTFIGGKLGSSKTRKLDIGCKNINGRFYVTSI 181 >UniRef50_B6ESX5 Conjugative transfer protein TraE n=2 Tax=Vibrionaceae RepID=B6ESX5_ALISL Length = 186 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 78/184 (42%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M + ++ + + + VLSL V++ + L N + + P + + F V Sbjct: 1 MLNSNKIDFIALSKALNKLLLIGFVLSLVVSITLALGLLSLANNKSRTLVPPSISKAFTV 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S + D SY QMA + L+LNV+ V+ LL Y A + ++ L E+ IK Sbjct: 61 SDGTIDESYASQMAEYILYLKLNVTPANVERQFSQLLDYANADAWSSVQPQLVRESVLIK 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 N++S F + V V V + GVL +GD Y++ LK E G + Sbjct: 121 KSNLSSTFSVSRVEVAMDSLIVNVHGVLNKSVGDRALTPVSCSYLIYLKYEQGTLTFSSI 180 Query: 181 GETD 184 + Sbjct: 181 KKEA 184 >UniRef50_Q8D6A3 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D6A3_VIBVU Length = 189 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 82/184 (44%), Gaps = 2/184 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M++ + + + + + S+ VNV+ G++ + +E+ + P + F + Sbjct: 1 MDNQHQGNLLALSKLLNFLLVFGFAASMLVNVVLGLSLAKTLSEKSRTLVPPTISQAFTI 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S + DA YLQ M F+ L+LNV+ V + LL Y+ + ++ +L ++A+ +K Sbjct: 61 SDTAIDAPYLQLMGEYFLKLKLNVTPANVFRQYGLLLDYVPTENWSTIQPVLVKDAEHLK 120 Query: 121 NDNVNSAFF--QTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLD 178 N S F + + + + G L +GD +++ Y + + NGV L Sbjct: 121 KYNTTSRFDALPGRTEISIENRQFKQTGHLTKTVGDRTLPSELVTYTVQMDYSNGVIELI 180 Query: 179 NFGE 182 + Sbjct: 181 GIKK 184 >UniRef50_Q2LTZ4 Hypothetical sex pilus assembly and synthesis protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ4_SYNAS Length = 194 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 1/180 (0%) Query: 6 RLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSA 65 TS ++A + ++V+ + V YR N QRT + P + ++ + Sbjct: 7 LQKTSNIVAENRLLK-FVVVVIGVAAIANAVMTYRALNYQRTIIVPPVLKSRIEITGDRV 65 Query: 66 DASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVN 125 Y++ + AL + S TV LL P A + K +L E A R+ V Sbjct: 66 SEEYVKAFSRYIAALSFSYSPGTVKPQFDELLALYAPEAFPEGKRVLYELADRVITTRVT 125 Query: 126 SAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDD 185 S FF + V + ++E+ G + ++ D K K Y++ + +G + E +D Sbjct: 126 SVFFMGKLYVDGEKNQIEVSGQRRQYVDDRKVEDITKTYLIDYRISDGRFQVVRISEKED 185 >UniRef50_C9NPU8 Putative conjugative transfer protein TraE n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU8_9VIBR Length = 188 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 4/189 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSV-LIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFA 59 ME R + + +F+++ + LS++ + G Y QR + P + F Sbjct: 1 MERVIRHQLLELSRLLNVFLAIGFLSLSVACLALTGSLVY-ALTHQRYTLVPPTISGAFT 59 Query: 60 VSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRI 119 +SQ D +YL M+ F+ L+ +V+ V + LL Y+ + ++ L E+A+RI Sbjct: 60 ISQVKVDDAYLSMMSDYFLHLKFDVTPSNVHRQYGRLLDYVPEHMWSAVQPELLEDAQRI 119 Query: 120 KNDNVNSAFF--QTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWL 177 + +V+S ++ V + G L +G+ + ++ + + G L Sbjct: 120 RQQHVSSHLDVLPDQTQIDVDSLVVRVSGTLAKAVGERQLPPRAVDVLIQMAYQQGTLSL 179 Query: 178 DNFGETDDE 186 + + + + Sbjct: 180 LSIHQEESQ 188 >UniRef50_A0R7R2 Conserved hypothetical sex pilus assembly and synthesis protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7R2_PELPD Length = 199 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 2/186 (1%) Query: 1 MEHGARLS-TSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFA 59 M+ LS S + + V++VL ++ V+ Q ++ + P N Sbjct: 1 MKMTNYLSNASNLYGQNRLLKFVVVVLGITT-VVNTYMIRNAQQMEKVVIIPSVINDKMW 59 Query: 60 VSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRI 119 +S A Y++Q A + L V + LL P + + +L A+RI Sbjct: 60 LSGTKASDEYVKQFARDVSNMFLTYHPSNVRTNFNDLLAMYDPSEFAEAQRVLYNLAERI 119 Query: 120 KNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 + S F+ T + + ++EI G I IK Y+L K E+G + Sbjct: 120 EESKAASGFYITKLVNNEEKHQLEITGSKTMIINGKVTDNSIKIYLLDYKIESGKFCILR 179 Query: 180 FGETDD 185 F E + Sbjct: 180 FMEKSE 185 >UniRef50_Q5ZTS0 Putative conjugative transfer protein TraE n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS0_LEGPH Length = 187 Score = 143 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 83/181 (45%), Gaps = 1/181 (0%) Query: 4 GARLSTSRVMAIAFIFMS-VLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQ 62 + L + + + FI +S VL+ ++ ++ V + ++ T P + F +S Sbjct: 7 KSELMKEKKIRVLFIGISSVLLAMTFMQSITIVVLLHYAHSKHETHFIPPKISQEFTLSG 66 Query: 63 NSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKND 122 YL+ M LR N++S + ALL Y+ P ++ L +E ++I ++ Sbjct: 67 TGVSEGYLRDMTNFLTQLRFNITSSSATYQFNALLGYVAPSLYGDIRAQLVKEVEQINHE 126 Query: 123 NVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGE 182 +++S F+ ++ + ++ V++ G +K ++G + +++ E G+ L N + Sbjct: 127 HLSSVFYPSTFEIDIKHLSVKVMGQMKRFVGADLMSDVRETFLIRYSYEYGLLKLTNLEK 186 Query: 183 T 183 Sbjct: 187 V 187 >UniRef50_C5SIK2 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK2_9CAUL Length = 199 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 3/186 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ ++ A +SV+ V++ + V + L + RT + P Sbjct: 1 MDFAKTQQERKLYASR---LSVMTVVAAASIVTNACLSMVLVGQSRTIIIPTIPAEVSID 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 + +AD YL++ A L LN S ET+ + + + P A +M IL + + Sbjct: 58 AYGAADPLYLERFARDVSFLFLNRSPETLLYFQREAQKIMEPTAYQEMHKILVRDRQEAI 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +N + ++F V P+ VEIRG ++ G + K Y L + + L +F Sbjct: 118 RENRSQSWFPNDFYVDPKTMYVEIRGTIRIEAGGREVDAQNKIYALTFSKNGQLVRLKSF 177 Query: 181 GETDDE 186 E E Sbjct: 178 TEITPE 183 >UniRef50_B4RLS3 TraE n=10 Tax=Neisseria RepID=B4RLS3_NEIG2 Length = 216 Score = 140 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%) Query: 7 LSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSAD 66 LS + +F +L+ +S++VN+ +T +TP VS + Sbjct: 2 LSELAIRTGIKVFFWILLGMSIAVNLFLSATLLFKGTIVQTTLTPPEIRRSMTVSNIAFS 61 Query: 67 ASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNS 126 YL++MA L LNV+ +TVD + LL+ + P ++ ++ L+ A +K +NV + Sbjct: 62 KEYLEEMAPYAAYLLLNVTPKTVDYQNSQLLKIVSPDYKDALERELSLNALWVKKNNVGT 121 Query: 127 AFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGETDD 185 F T V IRGV + ++ + ++ K G L + E Sbjct: 122 TFSATEATADISDNTVSIRGVFEVKRNNALVEQKDRELLISFKNNYGTLQLLSIKEVQK 180 >UniRef50_Q5WSC2 Putative uncharacterized protein n=2 Tax=Legionella RepID=Q5WSC2_LEGPA Length = 185 Score = 139 bits (349), Expect = 7e-32, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 3/178 (1%) Query: 9 TSRVMAIAFIFMSVLIVLSLSVNV---IQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSA 65 V++ + + + + +++ + I G + N + T P+ + +S + Sbjct: 6 RDNVLSKNKVLLHLTLAWAVTSTIAVFILGGLCVHVVNNKETHWLPICTEDGYFLSNSFF 65 Query: 66 DASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVN 125 SY++ M I LRL + +TV A +L+ I Q K IL E+ +K N++ Sbjct: 66 SPSYIKDMTKKVIQLRLTYNPDTVAARFASLVHLIPASHQEAFKTILDSESSVVKEKNIS 125 Query: 126 SAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 S F++ + + + +++G+L + K Y++ NG+ W E Sbjct: 126 SVFYEKDIEIDESTLQAKVKGILNRTSHGLEVKPQSKVYLVQFAHLNGMMWPKAIKEV 183 >UniRef50_Q2N5H9 Putative conjugative transfer protein TraE n=5 Tax=Erythrobacter RepID=Q2N5H9_ERYLH Length = 189 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 72/188 (38%), Gaps = 3/188 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ ++ +VL + ++ + +++ + P+ + V Sbjct: 1 MQAEFAHEQAQTFLRQRNRFAVLAGVLGLTTLV--SLGAAVTGDEKVVLVPIT-SERITV 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S DA YL+ + + LN + E++D +L+ P + +K L + + + Sbjct: 58 SSGGVDAPYLELVTRDTALMFLNRAPESLDYWMANILKLADPASHGVLKADLVKIVEEQR 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +++ AF + V P+ + G LKT++G + + + + L F Sbjct: 118 GSDISQAFVIAQIHVDPKALTSTVEGTLKTFVGAQVIASQRRAFRFRWSQRGLSLALAGF 177 Query: 181 GETDDEKK 188 + +K+ Sbjct: 178 EQLPTDKE 185 >UniRef50_B4EQI4 Putative TraE conjugative transfer protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI4_BURCJ Length = 196 Score = 137 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 66/153 (43%) Query: 19 FMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFI 78 F+ + +V +L V+ + L T + P + + +A+ YL M+ + Sbjct: 19 FLKLCLVFTLGTIVLGLILVMFLVLRDPTRIVPPEIQHAYVIGSGTANGDYLSDMSDYVL 78 Query: 79 ALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQ 138 +L+ + ETVD ++ +L+ P A +K +L A RIK + + + F + + Sbjct: 79 SLQATTTPETVDHNNAVILKMTDPAAYPVIKTMLDAAAIRIKRERITTIFVMRTKSIDRP 138 Query: 139 YGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE 171 RV G KT+IGD + + ++ Sbjct: 139 NNRVITTGTFKTYIGDKLVGEEDRSLLVAFNIT 171 >UniRef50_A3VN26 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN26_9PROT Length = 199 Score = 135 bits (340), Expect = 7e-31, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 3/187 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + + ++V +L + Y + R + + A+ Sbjct: 1 MDTNVSYTRLKTALRQRNVLAVFTLLLGVTG---LLQTYLIATRDRHVILTPTLLSDTAI 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S + YL+Q+ L LN + + +L+ P +++ L E +R+ Sbjct: 58 SARAPSPEYLEQVTRDVAGLFLNRHPHNLSYFRENILRLAHPSTHGEIESALMETERRLI 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 + F+ + V P EIRG L T++G + +D Y + E WL++F Sbjct: 118 ATKTATVFYPAEIYVDPLTLYSEIRGELHTYLGPERVSSDPALYAADWRFEAMRLWLEDF 177 Query: 181 GETDDEK 187 ++ Sbjct: 178 YPITADE 184 >UniRef50_D0SGY9 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY9_ACIJO Length = 190 Score = 134 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 1/188 (0%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M T ++ VL N+ + Q + P A + + Sbjct: 1 MLKKNGEKTINELSADRKSSRFTTVLMGISNLGLIGLIGYILMNQTVVIMPSEQTAKYTI 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 + A+ Y M + L NV+ VD + LL+ + P Q MK L + +++IK Sbjct: 61 GNDQANKEYFIDMTRDNVNLLYNVTPINVDENFGTLLKRVAPEHQKDMKTYLDKASEQIK 120 Query: 121 NDNVNSAFFQTSVR-VWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 D + + T + P V GV KT++ D + + ++G + N Sbjct: 121 RDQITQVWSTTGLYQYIPGQQAVIANGVTKTYLADKLVTSRAQKIKFEYVMKSGQLFPKN 180 Query: 180 FGETDDEK 187 E + Sbjct: 181 ITEVLQNE 188 >UniRef50_C8QE98 TraE family protein n=2 Tax=Pantoea sp. At-9b RepID=C8QE98_9ENTR Length = 199 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 4/187 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M + R +RV +A + L+ LSL+ N I G + Q+T PM F+ PF Sbjct: 1 MRYKVREGRNRVTVLALAGLGSLLALSLAANGITGALAWHFARTQKTITVPMLFDRPFVS 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 + S D + + SFI LRL+V+ ETVD+ H ALL+++ P ++ MK LA EA+ I+ Sbjct: 61 TAASGDDALNGLLVRSFINLRLSVTPETVDSQHAALLRFVPPEDRDAMKKQLAAEAEYIR 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLK--TWIGDSKPF--TDIKHYILILKRENGVTW 176 + V+S F G + RG L T G+ K K + L + +G+ Sbjct: 121 KNGVSSVFRLDDETTDTTTGDIIARGTLSAGTTNGNLKLSLPDTKKAWRLSVHYVDGLIR 180 Query: 177 LDNFGET 183 L F E Sbjct: 181 LTAFTEV 187 >UniRef50_D2U003 Conjugal transfer pilus assembly protein TraE n=1 Tax=Arsenophonus nasoniae RepID=D2U003_9ENTR Length = 172 Score = 132 bits (331), Expect = 7e-30, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 2/167 (1%) Query: 19 FMSVLIVLSLSVNVI--QGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALS 76 + ++ L + ++ +L N +T + PM + F+ DA YL+ M LS Sbjct: 4 VLITVLSLGVCYRLLMQNRELISQLINNHQTIIIPMVDHEGFSFYGTRGDARYLRLMGLS 63 Query: 77 FIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVW 136 + LRLNVS++T+ SH LL Y + ++ +LAEE +R+ + +S F+ V+V Sbjct: 64 LLNLRLNVSAQTIKDSHNLLLAYSDTHLREKLIEVLAEERQRMAINEASSTFYLKEVKVS 123 Query: 137 PQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFGET 183 P G V+I G L + G KHY L L+ +G L +F E Sbjct: 124 PDSGVVDITGELHFFYGIKAVEPVDKHYRLRLETRDGALKLTDFVEL 170 >UniRef50_A7H3G4 Putative conjugative transfer protein TraE n=4 Tax=Campylobacterales RepID=A7H3G4_CAMJD Length = 192 Score = 130 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 72/178 (40%), Gaps = 1/178 (0%) Query: 4 GARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQN 63 + + + F V ++LS + V+ V R +++ + P N F ++ N Sbjct: 5 KYKNQMDKYIFENITFRIVTLLLSFVILVLIWVILARTDSQKVVFMPPKIVNQEFWIAGN 64 Query: 64 SADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDN 123 YL +M LN++ E + LL + P ++K L E+ I ++ Sbjct: 65 QVSKGYLHEMGQFISFNLLNITKENARNNIDNLLTLVDPKFYQEVKTKLLEQMNYIIDNA 124 Query: 124 VNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 ++ FF +++ G++++ GV+K I D + + E G L++ Sbjct: 125 ISRTFFVSAIDAD-AKGQIKVFGVVKDIISDKVVRSSQSVLKINYIIEQGRFILNDLS 181 >UniRef50_A2PNK5 Sex pilus assembly n=17 Tax=Gammaproteobacteria RepID=A2PNK5_VIBCH Length = 208 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 65/191 (34%), Gaps = 5/191 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ L + + + + LI + + N++ V A+ P + V Sbjct: 1 MKFDVFLKSWQGTQLENRWQRFLIAVLVLSNLLLAV--AAFSRNTVVAIQPPTLSETAEV 58 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+N A YL+ L L NV+ V A+ + P Q+ L +A++I+ Sbjct: 59 SRNQATQPYLESWGLYLAELMGNVTPGNVSFIRVAIEPLLSPAVYQQVVDALEIQARQIR 118 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVT---WL 177 D V F V + G V + G + Y + + W+ Sbjct: 119 EDRVTLKFQPRQVEYEYETGHVFVTGYSLVSGPSGDEQRQTRTYEFDIDIDQYRPKLSWM 178 Query: 178 DNFGETDDEKK 188 D + K+ Sbjct: 179 DTYEGQARTKR 189 >UniRef50_Q5NX50 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX50_AZOSE Length = 206 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 67/173 (38%), Gaps = 4/173 (2%) Query: 12 VMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQ 71 + A + + + + L +++ V + ++ +R + P + + ++A A YL+ Sbjct: 10 LQAATAMVIVLTVGLVIAIAVGGIAVSRAMEQRERIILIPPYLDRQVQLGWSAASADYLK 69 Query: 72 QMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAK--RIKNDNVNSAFF 129 + F L NV+ +D Q L ++ ++ L A+ + + + F Sbjct: 70 SFGMYFTTLAANVTPNNIDFVAQNLELFVDSRIFPDVRRTLKATAENPQFRGTGSSLVFQ 129 Query: 130 QTSVRVWPQYGRVEIRGV-LKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 + P+ +V + G K T++ Y L ++ G W+ + Sbjct: 130 PNEILFEPETMKVFVGGTATHRDAAGRKTDTEM-IYELGVEMRTGRPWITSIE 181 >UniRef50_Q1N904 TraE n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N904_9SPHN Length = 189 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 67/188 (35%), Gaps = 3/188 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ S+ + I +V+ + V V+ + +++ + + Sbjct: 1 MDVSRVQQRSKRLLIQRN---TAMVVGGLLGVGLLVSVFVNSGKEQEIILSPVIEKQVRI 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S YL+ + L LN S + +D Q++L+ P A + L + K + Sbjct: 58 SSREVSPEYLEAVTRDMALLVLNRSPDNLDYWRQSILKMADPSAYGAINTELEKVVKAQR 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 ++ F T + V P+ + G + T IG + + + + L F Sbjct: 118 GTTLSQYFTMTDMHVDPETLESTVSGHVHTVIGSKEVGAEFRRFRFAWVNHGMSLKLVAF 177 Query: 181 GETDDEKK 188 G+ ++ Sbjct: 178 GQIVKAEE 185 >UniRef50_B7J827 Type IV conjugative transfer system protein TraE n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J827_ACIF2 Length = 204 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 62/182 (34%), Gaps = 3/182 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + + LIV+ + V+ + + R + P + + Sbjct: 1 MKFELFKKDYEGLLRNN--RAFLIVIGVLAVVVLMQQWAIVTEKTRMVLVPPYIDKAVKI 58 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 SADA Y + L L N++ +A+ + + +K +A+ A Sbjct: 59 GYASADADYYESWGLYVSELMGNLTPGDAPFVEKAMGKLFSSVSYEGVKSRIAQSAAEEA 118 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIG-DSKPFTDIKHYILILKRENGVTWLDN 179 N + AF SV Q G V + G L+ G + + + G LD+ Sbjct: 119 NADATFAFEAKSVIWQSQTGTVFVHGTLRQVNGAGRTISATPFTFSMRVHIAAGRPVLDD 178 Query: 180 FG 181 F Sbjct: 179 FH 180 >UniRef50_C1SHE5 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE5_9BACT Length = 185 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 2/186 (1%) Query: 1 MEHGARLST-SRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFA 59 M +S S + + + IVL+ + + + N Q + P A Sbjct: 1 MRFDKYVSRASNLFMENRLCKFMTIVLAAVIIIQLWMLNNSF-RNQNAYLIPTGLTTKAA 59 Query: 60 VSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRI 119 VS + DA+Y+Q M + L N + +TV ++ L + L A Sbjct: 60 VSGHFLDANYVQAMGVYVSQLLYNFTPQTVANQYKELASLFSADCYQENSNKLISMANAY 119 Query: 120 KNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDN 179 ++ ++ F ++ + Q +EI G I + ++ NG+ + Sbjct: 120 ADNEISMVFRVMEIKSFTQPNVIEISGETSKTILGENVQSFKASLLVYYDVFNGLFRITA 179 Query: 180 FGETDD 185 E Sbjct: 180 IEEKQS 185 >UniRef50_C4NVT6 TraE n=10 Tax=Gammaproteobacteria RepID=C4NVT6_ECOLX Length = 208 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 2/180 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M L T + + +++ + V E + P V Sbjct: 1 MNLKKYLKTWEGTQTENKWGRIFQGGLIAIVFLLVVQV--FSKETIVTIQPFTLTEEAWV 58 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 ++++A SY + +F L NV+ TVD + + + P + + +A++IK Sbjct: 59 TKSNASQSYKEAWGFAFAQLLGNVTPGTVDFVKERITPLLSPSIYQDVIDAIEIQAQQIK 118 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 ND V F V P+ +V + G S + Y +K N LD Sbjct: 119 NDRVTMRFEPRFVEYEPKSDKVFVYGYSYVKGASSNEERSERSYEFAIKISNYAPVLDYI 178 >UniRef50_Q6MBA2 Putative F pilus assembly protein traE n=2 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA2_PARUW Length = 189 Score = 122 bits (306), Expect = 7e-27, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 2/186 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 ME + + F+ V + L+L + VI V+ +R + P F V Sbjct: 1 MERIFFERNLNHLLVQRNFL-VGLSLTLLMGVILAVSFLCF-KTERIIIVPSTIEKEFWV 58 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 +S A+YL+Q L L L SS + D L ++ P +K L EE + +K Sbjct: 59 DAHSVSATYLEQFGLFLGQLLLTKSSYSADLHRNILCRHTEPQYLALLKQRLMEEEETLK 118 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 N + F+ +V V P+ V + G + ++ + + Y L L Sbjct: 119 KQNASYVFYLNNVHVNPKELTVTLLGDRQFFLAGQQTTLESCGYTLHFNYSGARLLLKGI 178 Query: 181 GETDDE 186 + + Sbjct: 179 TQEKTD 184 >UniRef50_Q1NGT9 Hypothetical sex pilus assembly and synthesis protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT9_9SPHN Length = 211 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 22/197 (11%) Query: 3 HGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQ 62 H +S + + ++ L + V+ G+ Y QRT V P V+ Sbjct: 24 HRYLQGSSNLFEENRLLKFSVLGL-FGITVVLGITLYTTSQNQRTIVVPFGAGGDLYVTG 82 Query: 63 NSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKND 122 +YL+ M + +AL S+ + D Q LL + P A N ++ L + N+ Sbjct: 83 GKPSPAYLRTMTRNIVALSGTYSTLSADRQFQELLSIVHPTAYNGIRDSLNAILDELANN 142 Query: 123 NVNS-----------AFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRE 171 S + + V + RV I GV++ + G+ + + Sbjct: 143 PTLSIATYIRPDQPVTWTDRQILVPVEKVRV-IGGVIRKFRGN---------LRIRYTID 192 Query: 172 NGVTWLDNFGETDDEKK 188 G WL + E + + Sbjct: 193 AGRFWLLSLTEESFDAE 209 >UniRef50_Q19NT0 TrhE n=10 Tax=Enterobacteriaceae RepID=Q19NT0_ECOK1 Length = 262 Score = 118 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 3/155 (1%) Query: 25 VLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNV 84 +S++V + + T VTP N V N A SY Q AL F L N+ Sbjct: 73 TVSIAVIGLLVAKILFF-TDPVTIVTPPNMNEEITVVGNKASESYKTQWALFFSTLLGNI 131 Query: 85 SSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQYGRVEI 144 + + +L + P Q + L E+ ++ V F + P+ V + Sbjct: 132 NPTNISFVTAYVLDALSPELQAKTSESLQEQINIMQARGVEQTFKPNDIYFDPKNDMVYV 191 Query: 145 RGVLKTWIGD--SKPFTDIKHYILILKRENGVTWL 177 G T + + K + Y +L +NG + Sbjct: 192 WGTKTTRLVNVPDKTESSKWTYEWVLGMKNGRPRI 226 >UniRef50_B2I3Y7 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Y7_ACIBC Length = 192 Score = 117 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 9/185 (4%) Query: 4 GARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAP-FAVSQ 62 + S +R + L+ LS+ N++ +T + P + P + + Sbjct: 11 ESLNSRNRSQTYVIFSLIGLLTLSIIANIVLA-------RSGKTIIKPSDNSGPTYILGS 63 Query: 63 NSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKND 122 SA+ Y + I NV+ V + + +L + Q++ L++ +IK + Sbjct: 64 TSANKEYYLDFSNYVINYLFNVTPINVSKNFEKILGITCEPSFPQIQKYLSQSEAQIKRE 123 Query: 123 NVNSAFFQTSVRVWPQ-YGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 + S + + + + + I G KT++ D + G L + Sbjct: 124 GLTSVWSSSGAFTFQEADKAITIEGTRKTYLADRLVSEKSQKIQTKFVMSKGTICLYSLN 183 Query: 182 ETDDE 186 E DE Sbjct: 184 EVKDE 188 >UniRef50_B7XGQ5 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGQ5_PSEPU Length = 212 Score = 116 bits (290), Expect = 5e-25, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 6/183 (3%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M + ++ M F+ + + + N++ + L ++ V P V Sbjct: 1 MLLKSLSNSFDGMRGENQFLRIAVAGLVLSNLLVSCSA--LNKDEVVTVIPPTLTETAWV 58 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 S+ + Y AL + NV+ AL + +L + +I+ Sbjct: 59 SKTQSSGEYADAWALYIAMMLGNVTPHNASVVKDALGPILDKAIYQDTMKVLDTQIHQIR 118 Query: 121 NDNVNSAFFQTSV---RVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILK-RENGVTW 176 D V +F V + V R V + GD K + L++K + ++W Sbjct: 119 QDRVTLSFEPQKVLRDNLNENKFYVTGRSVSEGPAGDKKRSNRTYEFELVIKDYKPVLSW 178 Query: 177 LDN 179 L Sbjct: 179 LST 181 >UniRef50_C1MEK1 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEK1_9ENTR Length = 208 Score = 115 bits (289), Expect = 6e-25, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 5/186 (2%) Query: 3 HGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQ 62 H + + F + + + N++ G L Q + P + + Sbjct: 4 HNFKKGLVGLQLENKSFKLIAASM-ILANLVLGYAL--LAKTQPITIIPPNLTETAWLDE 60 Query: 63 NSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKND 122 +A +SY++ AL N + T+D ++ ++ ++ + ++ +IK D Sbjct: 61 KAASSSYMKAWALYIADSFGNANPTTLDLLKNSIGPFLDASIYTKVMKAMDDQIDQIKRD 120 Query: 123 NVNSAFFQTSVRVWPQY-GRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 ++ +F V P G + G KP T +Y + + + + F Sbjct: 121 RISLSFNPVGVITDPLAVGTFYVTGNQTLEGITGKPSTTPVYYEITVNVKGYRP-IITFI 179 Query: 182 ETDDEK 187 E K Sbjct: 180 EIKSGK 185 >UniRef50_C4YZZ8 Putative uncharacterized protein n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YZZ8_9RICK Length = 220 Score = 115 bits (287), Expect = 9e-25, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 70/186 (37%), Gaps = 6/186 (3%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ ++++ + ++L+L ++ I +L + + + + Sbjct: 1 MQEKILSDQAKMLTKQR---GLFLILTLMLSFICCGLTLKLITTRDKTILVPGLSQEVWL 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPG---AQNQMKVILAEEAK 117 Q SY+++++L ++++ L+++ + V + +YI +++ + + Sbjct: 58 GQGRVSESYIEEVSLMYLSMLLDLNKDVVGYKEALISKYISHSSSKYMKEIRQYFSHVKE 117 Query: 118 RIKNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWL 177 + K +++ F S+ V V +GVL T GD Y L L Sbjct: 118 QYKQFGLSTYFAVKSLEVNSSDNSVIAKGVLTTKFGDHGIDVKETSYFLSYDLVGSTLRL 177 Query: 178 DNFGET 183 F Sbjct: 178 KEFHHI 183 >UniRef50_C0QUX4 Type IV conjugative transfer system protein TraE n=1 Tax=Persephonella marina EX-H1 RepID=C0QUX4_PERMH Length = 175 Score = 115 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 10/185 (5%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M++ R S +F+ L + + + Y P Sbjct: 1 MKYIERWSELYRKNAILLFVVFLQAVLIV--FLLTAVLYLAVKRTAVIAIPPTGTQIAT- 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 ++ +I L +N S +D L +I + + L EA+ IK Sbjct: 58 ----GSETHRLLWGRYYIDLLMNFSKNDIDNRLNILFTFI---QNPKARERLIREAEEIK 110 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +++ F Q G V ++G +K WIG + + + L+ + L+++ Sbjct: 111 KNDIVQVFIPYESTWKVQGGVVSVKGHIKRWIGTTLVRDEDVLVKVKLRPSGSIIALEDW 170 Query: 181 GETDD 185 Sbjct: 171 KYEKP 175 >UniRef50_A4JTP4 Sex pilus assembly protein n=2 Tax=Burkholderiales RepID=A4JTP4_BURVG Length = 235 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 65/168 (38%), Gaps = 3/168 (1%) Query: 15 IAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMA 74 ++L + +++ L + T + P +V ++AD YL+ + Sbjct: 13 ANKFAGAMLFSNVILASLLAASMVGNLSRHETTRLVPPYLAKAVSVGWDTADVEYLEGIG 72 Query: 75 LSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAK--RIKNDNVNSAFFQTS 132 L L NV+ + V+ L Q + P ++ + A+ ++ + F T Sbjct: 73 LYVATLTANVTPKNVNFVADRLSQLLTPRVYQGVRQQILALAQDPVFNSNGGSVRFEATK 132 Query: 133 VRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 V + +V + G + T +S+ T + + ++G W+D+ Sbjct: 133 VVSEKETQKVYVIGQMTTQSVNSR-DTKSAVIEMKIVMKDGRPWVDSM 179 >UniRef50_D2U0R4 Conjugative transfer pilus assembly protein TraE n=1 Tax=Arsenophonus nasoniae RepID=D2U0R4_9ENTR Length = 184 Score = 109 bits (273), Expect = 4e-23, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 1/146 (0%) Query: 36 VNNYRLQNEQRTAVTPMAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQA 95 + ++R + P V N +Y++ A L N + + ++ Sbjct: 1 MVILIFSKDERIIIVPPNLTTTSWVDANEGSTAYMRSWAGYIATLLGNTNPSSAPFIKES 60 Query: 96 LLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWP-QYGRVEIRGVLKTWIGD 154 L ++ P + + + +E +I+ D V+ +F T + P G + G + Sbjct: 61 LEPFLAPTNRGAIMQTIDDETGKIRRDRVSVSFSPTKISSDPMAKGTYFVEGTQEIKSIT 120 Query: 155 SKPFTDIKHYILILKRENGVTWLDNF 180 K + YI+ + + ++N Sbjct: 121 GKAVSHSVTYIVTVFIKGYKPVVENI 146 >UniRef50_Q8L278 Pilus biogenesis protein n=1 Tax=Proteus vulgaris RepID=Q8L278_PROVU Length = 205 Score = 108 bits (271), Expect = 7e-23, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 61/174 (35%), Gaps = 4/174 (2%) Query: 6 RLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSA 65 + ++ A V++ L V ++ + Q + P + +++A Sbjct: 7 KKGLLQMTAEISTLKWVVLGLLGVVVILSATL---MSRSQVVTIVPPNLTQTAWLDEHAA 63 Query: 66 DASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVN 125 A Y+ A+ N + +V+ +++ ++ N+M + ++ +IK D ++ Sbjct: 64 SAPYMSAWAVYVAQSLGNANPSSVNMVKESIGPFLDAKIYNEMMKRIDDQIDQIKRDRIS 123 Query: 126 SAFFQTSVRVWPQY-GRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLD 178 F V P G + G +P + + + + + + Sbjct: 124 LYFTPNRVITDPAAPGTFFVEGNQGLEGITGQPVVKLMTFQINVDIKGYRPVIT 177 >UniRef50_Q3IUW8 Putative uncharacterized protein traE n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW8_RHOS4 Length = 184 Score = 108 bits (269), Expect = 1e-22, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 68/181 (37%), Gaps = 3/181 (1%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+ + A +++++ +S++ N++ Q + + P + V Sbjct: 1 MDFATLSRRMKGAQRARNVVTLMLGVSIAANLLL--TWRISQENTQVVLIPSRVSDGM-V 57 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 ++ +AD Y++ ++L + VS T+ + + + ++ + A IK Sbjct: 58 ARGAADVRYIEALSLDAVYAMYTVSPATIRYGRDVIERISAAEDRARLLDAYDDIADDIK 117 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNF 180 +++ F + ++ + G+L T++ ++ + +L E L Sbjct: 118 LRRISTVFRPEKIEHNLPRLQIVVEGMLSTYLDTTEVSAQRRRIMLTFIEEGSSIRLSRM 177 Query: 181 G 181 Sbjct: 178 E 178 >UniRef50_Q2NQ47 Putative TraE n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NQ47_SODGM Length = 118 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 57/118 (48%), Positives = 86/118 (72%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M+H ARL++++++A++ + + + LS++ NVI + YRLQ +++ V PM F APFA+ Sbjct: 1 MKHAARLNSNKIIALSLVLLDAFLFLSVTANVILAITYYRLQGDRQVVVVPMLFKAPFAL 60 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKR 118 S+NS DASYL+QMALSF+ALRLNV+ ETV+ASHQ LL ++P AQ +K+ + R Sbjct: 61 SENSMDASYLEQMALSFVALRLNVTPETVEASHQFLLSMVKPSAQKSLKLAWRKRRVR 118 >UniRef50_A8F1T1 Conjugative transfer protein TraE n=26 Tax=Rickettsieae RepID=A8F1T1_RICM5 Length = 184 Score = 102 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 8/190 (4%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTP-MAFNAPFA 59 M+H + S+ + + + ++ +L +++ + E++ + P M + Sbjct: 1 MDHLFKQSSIQQLVKYNKRLLLITLLLAVTSLL--GMIKTVSTEEKWLLIPAMEPDRRMI 58 Query: 60 VSQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRI 119 VS S +YL++ A+ + S E V+ + + Q+ E + Sbjct: 59 VSSKSYHETYLKEWAVFVMKELFTTSPEEVERQIADMK--VVSSNTEQLDKFFKEHLDFV 116 Query: 120 KNDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKR-ENGVTWLD 178 K N++S FF V+V V I G + W ++K K Y+L KR N + L Sbjct: 117 KGSNISSVFFPKKVKVIADG--VLINGTFRYWFSENKHVATDKTYLLTYKRGANHLLLLT 174 Query: 179 NFGETDDEKK 188 E + K+ Sbjct: 175 GIKEEEVNKQ 184 >UniRef50_A0L344 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L344_SHESA Length = 218 Score = 97.0 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 7/184 (3%) Query: 2 EHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVS 61 + + S + + LS+SV ++ + + V P F P ++ Sbjct: 4 KSKIKESYDNLNISNKNIGRSNLALSISVVLLL---FMVMTKQTEVIVMPNDFKEPIVMN 60 Query: 62 QNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQN-QMKVILAEEAKRIK 120 NS + Q L + N++ + + + I + + +A + + Sbjct: 61 GNSVTQEFKIQWGLMIATIIGNITPKNAKFVIDRVTKMIPLELNPDEAEATMAAAIEEMA 120 Query: 121 NDNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILK--RENGVTWLD 178 V+ F + V + G +T I D Y LK NG + Sbjct: 121 LRGVSQKFVPSDAIYSSVTDYVWVVGE-QTTISLKTGAADTTAYTFELKIGIRNGNPMIL 179 Query: 179 NFGE 182 + + Sbjct: 180 DIQQ 183 >UniRef50_B0RL16 Hypothetical sex pilus assembly and synthesis protein n=2 Tax=Yersinia RepID=B0RL16_YEREN Length = 216 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 25/180 (13%) Query: 25 VLSLSVNVIQGVNNYRLQN---EQRTAVTPM--AFNAPFAVSQNSADASYLQQMALSFIA 79 + ++ V+ + Y + N + + P + F V+ +A SY+ +MA A Sbjct: 37 FILYAILVLTALTYYEVSNSADNAKIVIAPFASVDSGDFWVTGTTASESYVNRMAKLVTA 96 Query: 80 LRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNSAFFQTSVRVWPQY 139 VS TV S+ +LL + P M+ E K++ + F T + Sbjct: 97 YYGTVSPTTVKNSNASLLAMVHPTRSEAMRKKFNEREKKV--TQFTTVSFITELNPEKPI 154 Query: 140 G------------------RVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLDNFG 181 R+EI + IG++ + Y + E+ WL + Sbjct: 155 QVTTNPEVEYKEHGSLPVYRMEIPVTKRKIIGETSTNPETAKYTVDYTIESNQFWLLDIT 214 >UniRef50_A9AU16 Putative uncharacterized protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU16_BURM1 Length = 199 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 62/181 (34%), Gaps = 5/181 (2%) Query: 1 MEHGARLSTSRVMAIAFIFMSVLIVLSLSVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAV 60 M AR + ++S+ I ++ + + + Sbjct: 1 MNRTARDKSIAEYKQLNRYLSIGIGCLGIAVLLLSLRVIF--QNVIVQMQVPGMPDGAKI 58 Query: 61 SQNSADASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIK 120 +N D +Q A + +V+ +++ + + ++ P A ++ + + ++ + +K Sbjct: 59 ERNGMDVGAMQAYAFAVTNALASVNPSNGESTKRFVQPFLSPAAYTKVSLAIDQKIETLK 118 Query: 121 NDN--VNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTDIKHYILILKRENGVTWLD 178 + + F + GRV ++G + T + + ++ N +D Sbjct: 119 SQRELGSYYFVLKRFDADEKLGRVFVQGDVHTVNAAKDTG-EPWVFEYPVRFGNYRMTMD 177 Query: 179 N 179 + Sbjct: 178 D 178 >UniRef50_A4V6Q7 Putative transmembrane protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V6Q7_PSEFS Length = 210 Score = 47.0 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 10/158 (6%) Query: 9 TSRVMAIAFIFMSVLIVLSL--SVNVIQGVNNYRLQNEQRTAVTPMAFNAPFAVSQNSAD 66 + + +AFI ++V++ + +N + + ++ + + + VS+N Sbjct: 21 RASRINVAFIAVTVILTGVIVYLINWNNHLQDVNVELQGQRVMYGYPNAEGVFVSENEVP 80 Query: 67 ASYLQQMALSFIALRLNVSSETVDASHQALLQYIRPGAQNQMKVILAEEAKRIKNDNVNS 126 ++ F+ N + ++ ++ L+ + P + + L AK+ + Sbjct: 81 ERHIIAFTSVFLDNFYNFTPDSSFSNANEALRLMSPRFRAVQEETLKLVAKQSSEQQITQ 140 Query: 127 AF---FQTSVRVWPQYGRVEI-----RGVLKTWIGDSK 156 F + PQ V R L T G +K Sbjct: 141 VFVRTSPYKIETTPQGYIVTFQALRYRATLNTVFGKAK 178 >UniRef50_A5CCQ0 Conjugative transfer protein n=8 Tax=Rickettsieae RepID=A5CCQ0_ORITB Length = 110 Score = 45.8 bits (107), Expect = 8e-04, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Query: 42 QNEQRTAVTP-MAFNAPFAVSQNSADASYLQQMALSFIALRLNVSSETVDASHQAL 96 E++ + P M + VS + +YL++ A+ L S V+ + Sbjct: 40 TKEEKWLLIPAMEPDRKMMVSSKNYHETYLKEWAIYVTKLLFTTSPNEVERQIADM 95 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.136 0.327 Lambda K H 0.267 0.0418 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 797,698,725 Number of Sequences: 3077464 Number of extensions: 24595085 Number of successful extensions: 81108 Number of sequences better than 1.0e-01: 60 Number of HSP's better than 0.1 without gapping: 144 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 80919 Number of HSP's gapped (non-prelim): 155 length of query: 188 length of database: 1,040,396,356 effective HSP length: 121 effective length of query: 67 effective length of database: 668,023,212 effective search space: 44757555204 effective search space used: 44757555204 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 89 (38.9 bits)