 |
| Job Description | P0ABG1 | | Confidence | 10.84% | Date | Thu Jan 5 11:15:26 GMT 2012 |
| Rank | 67 | Aligned Residues | 34 |
| % Identity | 15% | Template | c3h0dB_ |
| PDB info |
PDB header:transcription/dna | Chain: B: PDB Molecule:ctsr; |
PDBTitle: crystal structure of ctsr in complex with a 26bp dna duplex
|
| Resolution | 2.40 Å |
|
|   |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | G | D | L | T | E | S | M | F | K | R | E | A | G | I | K | D | S | G | H | L | I | P | G | H | G | G | I | L | D | R | I | D | S |
| Query Conservation |   |
  |
|
|
|   |
|
|   |
|
|
|   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |
|   |
|
| Template Sequence |   |
I | S | D | I | I | E | Q | Y | L | K | Q | V | L | N | X | S | D | Q | D | I | V | E | I | K | R | S | E | I | A | N | K | F | R | C |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |
|  |  |  |  |  |  |  | T | T | S |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|