409 c1gm5A_ Probab=34.10   E-value=28  Score=14.09  Aligned_columns=138  Identities=10%

Q ss_pred             HHHHHHHHHHHHCCCCEEEEE----CCH-HHHHHHHHHHCCCCCCCCCCCCC----CCCHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             999999999982898249986----795-99999999840137886644467----741145599999853976899863
Q batch____        75 EQLAIDRAKELFGADYANVQP----HSG-SQANFAVYTALLEPGDTVLGMNL----AHGGHLTHGSPVNFSGKLYNIVPY  145 (417)
Q Consensus        75 ~~~~~~~~a~l~g~~~~~v~~----~sG-t~A~~~~i~al~~pgd~v~~~~~----~~~~~~s~~~~~~~~g~~~~~~~~  145 (417)
                      ++...+..+.+-...+.++.+    +|| |..-..++......|-.+++..|    ..-.+..........|..+....-
T Consensus       368 ~~ai~eI~~dl~~~~~m~rLLqgdtGSGKT~Va~lail~ai~~G~qvlilaPTr~LA~Q~~~~l~~~~~~~gi~V~lltG  447 (729)
T c1gm5A_         368 KRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIG  447 (729)
T ss_dssp             HHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHHHHHHHHHHHHHHHTCSSCCEEECCS
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             99999999986358973067750478721589999999999659809999076999999999999960415974999988


Q ss_pred             CCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             67876565989999742335948999468989870108999999997797798141442364345556652135633775
Q batch____       146 GIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTT  225 (417)
Q Consensus       146 ~~~~~~~~D~e~l~~~~~~~~~~ii~~~~s~~g~~~dl~~i~~ia~~~g~~vivD~a~~~g~~~~~~~~~~~~~~d~~~~  225 (417)
                      ..+..   +-....+.+....+.+++..+.......++..+        .++++||+|-.+.........     +++.+
T Consensus       448 ~~~~~---~r~~~~~~i~~g~~~IvVgT~~lL~~~v~~~~l--------~lvVIDEaHrf~~l~~~~~~~-----~iL~l  511 (729)
T c1gm5A_         448 ATTPS---EKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNL--------GLVIIDEQHRFEALMNKGKMV-----DTLVM  511 (729)
T ss_dssp             SSCHH---HHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCC--------CEEEEESCCCCCCCCSSSSCC-----CEEEE
T ss_pred             CCCHH---HHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCC--------CEEECCCHHHHHHHHHCCCCC-----CEEEE
T ss_conf             99888---999999865037974898517788730141136--------678606168889998639988-----69999


Q ss_pred             CCC
Q ss_conf             385
Q batch____       226 TTH  228 (417)
Q Consensus       226 s~~  228 (417)
                      |.+
T Consensus       512 SAT  514 (729)
T c1gm5A_         512 SAT  514 (729)
T ss_dssp             ESS
T ss_pred             ECC
T ss_conf             458