19/01/2012 10:10:07 : INFO  : Run start: Thu Jan 19 10:10:07 GMT 2012
19/01/2012 10:10:07 : INFO  : Initialised job
19/01/2012 10:10:07 : INFO  : Renaming log file 'phyre2_20120119_101007.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/abf5369e4615f039/phyre_20120119_101007.log'
19/01/2012 10:10:07 : INFO  : Initialised job:
Sequence
>batch____
MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCI
ADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQE
FWLAHCGDFCVFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKGGHCQGYLF
RCLHCGKLRLWGDFS

19/01/2012 10:10:07 : INFO  : Checked sequence
19/01/2012 10:10:07 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 10:10:07 : INFO  : PSI-BLAST 3 iterations
19/01/2012 10:11:16 : INFO  : PSI-BLAST 5 iterations
19/01/2012 10:11:59 : INFO  : Finished PSI-BLAST
19/01/2012 10:11:59 : INFO  : Running Buildali to generate a3m file
19/01/2012 10:13:36 : INFO  : Converting to HMM
19/01/2012 10:13:36 : INFO  : Calibrating HMM
19/01/2012 10:13:41 : INFO  : Searching HMM database
19/01/2012 10:17:25 : INFO  : Finished buildali
19/01/2012 10:17:25 : INFO  : Predicting secondary structure
19/01/2012 10:17:25 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 10:17:25 : INFO  : Predicting Disordered regions
19/01/2012 10:17:25 : INFO  : Predicted Disorder (Disopred)
19/01/2012 10:17:25 : INFO  : Running memsat_svm check
19/01/2012 10:18:48 : INFO  : Globular protein
19/01/2012 10:18:48 : INFO  : Predicted Transmembrane (memsat_svm) ID 'abf5369e4615f039'
19/01/2012 10:18:48 : INFO  : Initialising fold library search
19/01/2012 10:18:48 : INFO  : Initialised search input
19/01/2012 10:18:49 : INFO  : Building Ensemble models
19/01/2012 10:18:49 : INFO  : Building hh.c2v5iA_.model.1.pdb
19/01/2012 10:18:49 : INFO  : Building c2v5iA_.1.pdb
19/01/2012 10:18:49 : INFO  : Building d2gzoa1.2.pdb
19/01/2012 10:18:50 : INFO  : Building d2hafa1.3.pdb
19/01/2012 10:18:52 : INFO  : Building c3kzqE_.4.pdb
19/01/2012 10:18:52 : INFO  : Building c2aj2A_.5.pdb
19/01/2012 10:18:53 : INFO  : Building c2in3A_.6.pdb
19/01/2012 10:18:53 : INFO  : Building d2do8a1.7.pdb
19/01/2012 10:18:54 : INFO  : Building c1x31D_.8.pdb
19/01/2012 10:18:54 : INFO  : Building d2ct1a1.9.pdb
19/01/2012 10:18:55 : INFO  : Building c2dvwB_.10.pdb
19/01/2012 10:18:55 : INFO  : Building c3mjhD_.11.pdb
19/01/2012 10:18:55 : INFO  : Building c2jm1A_.12.pdb
19/01/2012 10:18:56 : INFO  : Building c2dzoD_.13.pdb
19/01/2012 10:18:56 : INFO  : Building d2gs5a1.14.pdb
19/01/2012 10:18:57 : INFO  : Building d2dida1.15.pdb
19/01/2012 10:18:57 : INFO  : Building d2ew0a1.16.pdb
19/01/2012 10:18:57 : INFO  : Building c3mhvC_.17.pdb
19/01/2012 10:18:58 : INFO  : Building c2yrgA_.18.pdb
19/01/2012 10:18:58 : INFO  : Building c3gl5A_.19.pdb
19/01/2012 10:19:00 : INFO  : Building d2ctda2.20.pdb
19/01/2012 10:19:01 : INFO  : Finished HH model building
19/01/2012 10:19:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 10:19:05 : INFO  : html domain output complete ID 'abf5369e4615f039'
19/01/2012 10:20:22 : INFO  : Run end  : Thu Jan 19 10:20:22 GMT 2012
