Phyre 2 alignment of P31469 with c2e5rA_

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Job Description | P31469
Confidence | 13.22% | Date | Thu Jan 5 11:47:58 GMT 2012
Rank | 22 | Aligned Residues | 46
% Identity | 26% | Template | c2e5rA_
PDB info | PDB header:dna binding protein | Chain: A: PDB Molecule:dystrobrevin alpha; | PDBTitle: solution structure of the zz domain of dystrobrevin alpha2 (dystrobrevin-alpha)
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |  |  | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |  | . | . | . | . | . | 60 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | T | G | A | F | E | Q | D | K | T | V | E | C | D | C | C | E | Q | Q | . | . | T | S | V | Y | Y | S | G | P | F | Y | C | V | D | E | V | E | H | . | L | C | P | W | C | I | A | D | G | S | A | A | E | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | S | G | S | S | G | V | F | H | P | V | E | C | S | Y | C | H | S | E | S | M | M | G | F | R | Y | R | . | . | . | . | C | Q | Q | C | H | N | Y | Q | L | C | Q | D | C | F | W | R | G | H | A | G | G | S
Template Known Secondary structure |  |  |  |  | S | S | S |  |  | S |  | S |  |  | S | S | S |  |  |  | S | S |  | S |  |  |  |  | . | . | . | . |  | S | S |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . |  |  |  |  | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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