Phyre 2 Results for P31469

Email | l.a.kelley@imperial.ac.uk
Description | P31469
Date | Thu Jan 5 11:47:58 GMT 2012
Unique Job ID | abf5369e4615f039

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2v5iA_ |
|  | 34.0 | 60 | PDB header:viral protein Chain: A: PDB Molecule:salmonella typhimurium db7155 bacteriophage det7 PDBTitle: structure of the receptor-binding protein of bacteriophage2 det7: a podoviral tailspike in a myovirus
2 | d2gzoa1 |
|  | 28.3 | 31 | Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like
3 | d2hafa1 |
|  | 27.8 | 27 | Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like
4 | c3kzqE_ |
|  | 26.0 | 37 | PDB header:structural genomics, unknown function Chain: E: PDB Molecule:putative uncharacterized protein vp2116; PDBTitle: the crystal structure of the protein with unknown function from vibrio2 parahaemolyticus rimd 2210633
5 | c2aj2A_ |
|  | 25.0 | 27 | PDB header:unknown function Chain: A: PDB Molecule:hypothetical upf0301 protein vc0467; PDBTitle: x-ray crystal structure of protein vc0467 from vibrio2 cholerae. northeast structural genomics consortium target3 vcr8.
6 | c2in3A_ |
|  | 24.5 | 43 | PDB header:isomerase Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a putative protein disulfide isomerase from2 nitrosomonas europaea
7 | d2do8a1 |
|  | 23.9 | 23 | Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like
8 | c1x31D_ |
|  | 23.8 | 19 | PDB header:oxidoreductase Chain: D: PDB Molecule:sarcosine oxidase delta subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96
9 | d2ct1a1 |
|  | 21.6 | 36 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
10 | c2dvwB_ |
|  | 21.1 | 31 | PDB header:cell cycle/protein-binding Chain: B: PDB Molecule:26s protease regulatory subunit 6b; PDBTitle: structure of the oncoprotein gankyrin in complex with s62 atpase of the 26s proteasome
11 | c3mjhD_ |
|  | 20.9 | 53 | PDB header:protein transport Chain: D: PDB Molecule:early endosome antigen 1; PDBTitle: crystal structure of human rab5a in complex with the c2h2 zinc finger2 of eea1
12 | c2jm1A_ |
|  | 20.7 | 26 | PDB header:metal binding protein Chain: A: PDB Molecule:transcriptional regulator atrx; PDBTitle: structures and chemical shift assignments for the add domain of the2 atrx protein
13 | c2dzoD_ |
|  | 20.5 | 31 | PDB header:protein binding Chain: D: PDB Molecule:26s protease regulatory subunit 6b homolog; PDBTitle: crystal structure analysis of yeast nas6p complexed with2 the proteasome subunit, rpt3
14 | d2gs5a1 |
|  | 19.5 | 29 | Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like
15 | d2dida1 |
|  | 19.1 | 21 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
16 | d2ew0a1 |
|  | 19.0 | 23 | Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like
17 | c3mhvC_ |
|  | 16.7 | 33 | PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of vps4 and vta1
18 | c2yrgA_ |
|  | 15.9 | 16 | PDB header:ligase Chain: A: PDB Molecule:tripartite motif-containing protein 5; PDBTitle: solution structure of the b-box domain from tripartite2 motif-containing protein 5
19 | c3gl5A_ |
|  | 15.2 | 57 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dsba oxidoreductase sco1869; PDBTitle: crystal structure of probable dsba oxidoreductase sco1869 from2 streptomyces coelicolor
20 | d2ctda2 |
|  | 14.1 | 67 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
21 | d2ct7a1 |
| not modelled | 13.5 | 17 | Fold:RING/U-box Superfamily:RING/U-box Family:IBR domain
22 | c2e5rA_ |
| not modelled | 13.2 | 26 | PDB header:dna binding protein Chain: A: PDB Molecule:dystrobrevin alpha; PDBTitle: solution structure of the zz domain of dystrobrevin alpha2 (dystrobrevin-alpha)
23 | c1rimA_ |
| not modelled | 13.1 | 50 | PDB header:de novo protein Chain: A: PDB Molecule:e6apc2 peptide; PDBTitle: e6-binding zinc finger (e6apc2)
24 | c1x4jA_ |
| not modelled | 13.0 | 24 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ring finger protein 38; PDBTitle: solution structure of ring finger in ring finger protein 38
25 | c3bciA_ |
| not modelled | 12.1 | 38 | PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond protein a; PDBTitle: crystal structure of staphylococcus aureus dsba
26 | c1rikA_ |
| not modelled | 12.0 | 50 | PDB header:de novo protein Chain: A: PDB Molecule:e6apc1 peptide; PDBTitle: e6-binding zinc finger (e6apc1)
27 | d1ibia2 |
| not modelled | 11.9 | 75 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain
28 | c2egmA_ |
| not modelled | 11.9 | 26 | PDB header:transcription/metal binding protein Chain: A: PDB Molecule:tripartite motif-containing protein 41; PDBTitle: solution structure of the zf-b_box domain from human2 tripartite motif protein 41
29 | d2yt9a2 |
| not modelled | 11.7 | 33 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
30 | c2hr5B_ |
| not modelled | 11.7 | 13 | PDB header:metal binding protein Chain: B: PDB Molecule:rubrerythrin; PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
31 | d2djaa1 |
| not modelled | 11.6 | 30 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
32 | c1yzxB_ |
| not modelled | 11.5 | 29 | PDB header:transferase Chain: B: PDB Molecule:glutathione s-transferase kappa 1; PDBTitle: crystal structure of human kappa class glutathione2 transferase
33 | c2imeA_ |
| not modelled | 11.4 | 29 | PDB header:transferase Chain: A: PDB Molecule:2-hydroxychromene-2-carboxylate isomerase; PDBTitle: 2-hydroxychromene-2-carboxylate isomerase: a kappa class glutathione-2 s-transferase from pseudomonas putida
34 | d2fc7a1 |
| not modelled | 11.3 | 23 | Fold:RING/U-box Superfamily:RING/U-box Family:ZZ domain
35 | d1xpna_ |
| not modelled | 11.2 | 43 | Fold:Prealbumin-like Superfamily:Hypothetical protein PA1324 Family:Hypothetical protein PA1324
36 | d2d8ua1 |
| not modelled | 11.2 | 26 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
37 | c2d8uA_ |
| not modelled | 10.9 | 26 | PDB header:ligase Chain: A: PDB Molecule:ubiquitin ligase trim63; PDBTitle: solution structure of the b-box domain of the human2 tripartite motif-containing 63 protein
38 | d2ds5a1 |
| not modelled | 10.7 | 15 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:ClpX chaperone zinc binding domain
39 | c1ovxB_ |
| not modelled | 10.7 | 15 | PDB header:metal binding protein Chain: B: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: nmr structure of the e. coli clpx chaperone zinc binding domain dimer
40 | c2yt5A_ |
| not modelled | 10.6 | 26 | PDB header:transcription Chain: A: PDB Molecule:metal-response element-binding transcription PDBTitle: solution structure of the phd domain of metal-response2 element-binding transcription factor 2
41 | c3gmfA_ |
| not modelled | 10.6 | 43 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein-disulfide isomerase; PDBTitle: crystal structure of protein-disulfide isomerase from novosphingobium2 aromaticivorans
42 | c2wwaJ_ |
| not modelled | 10.4 | 36 | PDB header:ribosome Chain: J: PDB Molecule:60s ribosomal protein l19; PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome
43 | d6rxna_ |
| not modelled | 10.3 | 23 | Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin
44 | d1dfxa2 |
| not modelled | 10.1 | 36 | Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Desulforedoxin
45 | d1r4wa_ |
| not modelled | 9.9 | 29 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbA-like
46 | d1x68a1 |
| not modelled | 9.4 | 23 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain
47 | d1iiza_ |
| not modelled | 9.4 | 21 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme
48 | c3alrA_ |
| not modelled | 9.3 | 43 | PDB header:metal binding protein Chain: A: PDB Molecule:nanos protein; PDBTitle: crystal structure of nanos
49 | c2e6rA_ |
| not modelled | 9.3 | 24 | PDB header:dna binding protein Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; PDBTitle: solution structure of the phd domain in smcy protein
50 | c2difA_ |
| not modelled | 9.3 | 21 | PDB header:protein binding Chain: A: PDB Molecule:tripartite motif protein 39; PDBTitle: one sequence two fold ? : miss fold of the zf-b-box domain2 from human tripartite motif protein 39
51 | c2csvA_ |
| not modelled | 9.1 | 20 | PDB header:signaling protein Chain: A: PDB Molecule:tripartite motif protein 29; PDBTitle: solution structure of the zf-b_box type2 domain of human2 tripartite motif protein trim29 isoform alpha
52 | c3fz5C_ |
| not modelled | 9.1 | 0 | PDB header:isomerase Chain: C: PDB Molecule:possible 2-hydroxychromene-2-carboxylate isomerase; PDBTitle: crystal structure of possible 2-hydroxychromene-2-carboxylate2 isomerase from rhodobacter sphaeroides
53 | c3kp9A_ |
| not modelled | 8.8 | 18 | PDB header:blood coagulation,oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: structure of a bacterial homolog of vitamin k epoxide reductase
54 | c3c7mB_ |
| not modelled | 8.8 | 43 | PDB header:oxidoreductase Chain: B: PDB Molecule:thiol:disulfide interchange protein dsba-like; PDBTitle: crystal structure of reduced dsbl
55 | c2e6iA_ |
| not modelled | 8.8 | 44 | PDB header:transferase Chain: A: PDB Molecule:tyrosine-protein kinase itk/tsk; PDBTitle: solution structure of the btk motif of tyrosine-protein2 kinase itk from human
56 | d1gd6a_ |
| not modelled | 8.7 | 21 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme
57 | c2ds8A_ |
| not modelled | 8.5 | 15 | PDB header:metal binding protein, protein binding Chain: A: PDB Molecule:atp-dependent clp protease atp-binding subunit PDBTitle: structure of the zbd-xb complex
58 | d1i9za_ |
| not modelled | 8.5 | 17 | Fold:DNase I-like Superfamily:DNase I-like Family:Inositol polyphosphate 5-phosphatase (IPP5)
59 | c2k5cA_ |
| not modelled | 8.4 | 28 | PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein pf0385; PDBTitle: nmr structure for pf0385
60 | d2nwia1 |
| not modelled | 8.4 | 23 | Fold:Chorismate lyase-like Superfamily:Chorismate lyase-like Family:AF1396-like
61 | c3gn3B_ |
| not modelled | 8.4 | 43 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative protein-disulfide isomerase; PDBTitle: crystal structure of a putative protein-disulfide isomerase from2 pseudomonas syringae to 2.5a resolution.
62 | d1x6fa1 |
| not modelled | 8.4 | 33 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
63 | d1dx8a_ |
| not modelled | 8.3 | 31 | Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin
64 | d1vq0a2 |
| not modelled | 8.2 | 30 | Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like
65 | d1wena_ |
| not modelled | 8.2 | 15 | Fold:FYVE/PHD zinc finger Superfamily:FYVE/PHD zinc finger Family:PHD domain
66 | c3ld0Q_ |
| not modelled | 7.9 | 30 | PDB header:gene regulation Chain: Q: PDB Molecule:inhibitor of trap, regulated by t-box (trp) sequence rtpa; PDBTitle: crystal structure of b.licheniformis anti-trap protein, an antagonist2 of trap-rna interactions
67 | d2csva1 |
| not modelled | 7.8 | 20 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
68 | d1fkqa_ |
| not modelled | 7.8 | 20 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme
69 | c1ij2C_ |
| not modelled | 7.8 | 27 | PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
70 | d1iu5a_ |
| not modelled | 7.7 | 27 | Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin
71 | d1vzya2 |
| not modelled | 7.6 | 20 | Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like
72 | d2dq5a1 |
| not modelled | 7.5 | 32 | Fold:B-box zinc-binding domain Superfamily:B-box zinc-binding domain Family:B-box zinc-binding domain
73 | d1xjha_ |
| not modelled | 7.5 | 30 | Fold:HSP33 redox switch-like Superfamily:HSP33 redox switch-like Family:HSP33 redox switch-like
74 | c2krkA_ |
| not modelled | 7.5 | 38 | PDB header:protein binding Chain: A: PDB Molecule:26s protease regulatory subunit 8; PDBTitle: solution nmr structure of 26s protease regulatory subunit 82 from h.sapiens, northeast structural genomics consortium3 target target hr3102a
75 | d2rdva_ |
| not modelled | 7.4 | 27 | Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin
76 | c3cegA_ |
| not modelled | 7.4 | 12 | PDB header:ligase Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 6; PDBTitle: crystal structure of the ubc domain of baculoviral iap2 repeat-containing protein 6
77 | c3ghaA_ |
| not modelled | 7.3 | 43 | PDB header:oxidoreductase Chain: A: PDB Molecule:disulfide bond formation protein d; PDBTitle: crystal structure of etda-treated bdbd (reduced)
78 | c1ij2B_ |
| not modelled | 7.3 | 27 | PDB header:transcription Chain: B: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvtl coiled-coil trimer with threonine at the a(16)2 position
79 | c3a44D_ |
| not modelled | 7.2 | 33 | PDB header:metal binding protein Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form
80 | c2h51B_ |
| not modelled | 7.1 | 27 | PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (glu390->asp and arg286->lys) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk)
81 | d1m4ma_ |
| not modelled | 7.1 | 11 | Fold:Inhibitor of apoptosis (IAP) repeat Superfamily:Inhibitor of apoptosis (IAP) repeat Family:Inhibitor of apoptosis (IAP) repeat
82 | c3gn5B_ |
| not modelled | 7.0 | 21 | PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
83 | d2dipa1 |
| not modelled | 7.0 | 24 | Fold:RING/U-box Superfamily:RING/U-box Family:ZZ domain
84 | d1ypze2 |
| not modelled | 6.9 | 17 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like)
85 | d1h7va_ |
| not modelled | 6.8 | 31 | Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin
86 | d2gvia2 |
| not modelled | 6.6 | 33 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:FwdE C-terminal domain-like
87 | c2c2zB_ |
| not modelled | 6.5 | 0 | PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-8 p10 subunit; PDBTitle: crystal structure of caspase-8 in complex with aza-peptide michael2 acceptor inhibitor
88 | d2cota1 |
| not modelled | 6.5 | 50 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
89 | d1lv3a_ |
| not modelled | 6.5 | 26 | Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Hypothetical zinc finger protein YacG
90 | d2ewla1 |
| not modelled | 6.4 | 40 | Fold:E7 C-terminal domain-like Superfamily:E7 C-terminal domain-like Family:E7 C-terminal domain-like
91 | d1hxma2 |
| not modelled | 6.4 | 22 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C1 set domains (antibody constant domain-like)
92 | d1f6sa_ |
| not modelled | 6.3 | 17 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:C-type lysozyme
93 | d1rb9a_ |
| not modelled | 6.3 | 28 | Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin
94 | c2bsjB_ |
| not modelled | 5.9 | 57 | PDB header:chaperone Chain: B: PDB Molecule:chaperone protein syct; PDBTitle: native crystal structure of the type iii secretion2 chaperone syct from yersinia enterocolitica
95 | d1llmc2 |
| not modelled | 5.9 | 50 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
96 | d1nh8a2 |
| not modelled | 5.9 | 32 | Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain
97 | c2ei5B_ |
| not modelled | 5.8 | 27 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ttha0061; PDBTitle: crystal structure of hypothetical protein(ttha0061) from thermus2 thermophilus
98 | d1paaa_ |
| not modelled | 5.8 | 25 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2
99 | d1x6ea2 |
| not modelled | 5.8 | 63 | Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2