Phyre 2 alignment of P39221 with c1h2iG_

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Job Description | P39221
Confidence | 0.64% | Date | Thu Jan 5 11:58:35 GMT 2012
Rank | 60 | Aligned Residues | 31
% Identity | 16% | Template | c1h2iG_
PDB info | PDB header:dna-binding protein | Chain: G: PDB Molecule:dna repair protein rad52 homolog; | PDBTitle: human rad52 protein, n-terminal domain
Resolution | 2.7 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 6 | . | . | . | 10 | . | . | . |  |  | . | . | . | . |  |  |  | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | L | Y | D | E | V | I | I | . | . | I | N | K | I | . | . | . | P | P | K | K | I | D | T | K | G | V | A | T | E | E | V | A | T | K | K
Query Conservation |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | I | L | D | K | D | Y | L | R | S | L | N | K | L | P | R | Q | L | P | L | E | V | D | L | T | K | A | K | R | Q | D | L | E | P | S | V
Template Known Secondary structure |  | G | G | G |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  | S |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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