BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (220 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=... 359 4e-98 UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Pr... 263 3e-69 UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=... 244 2e-63 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 224 1e-57 UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 197 2e-49 UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=P... 197 2e-49 UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 196 5e-49 UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=... 196 7e-49 UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 195 8e-49 UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax... 194 1e-48 UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=c... 193 4e-48 UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax... 191 2e-47 UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=... 185 1e-45 UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=... 183 4e-45 UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemm... 182 6e-45 UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 182 9e-45 UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=De... 181 1e-44 UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 181 1e-44 UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=... 179 4e-44 UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=B... 179 5e-44 UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=B... 179 6e-44 UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria... 179 6e-44 UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=F... 179 8e-44 UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax... 177 2e-43 UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=c... 176 5e-43 UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 176 6e-43 UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 176 6e-43 UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=P... 174 2e-42 UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=F... 174 2e-42 UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 174 3e-42 UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=c... 173 3e-42 UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=... 173 3e-42 UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=c... 173 4e-42 UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cy... 172 8e-42 UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=S... 171 1e-41 UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 171 1e-41 UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Ta... 171 2e-41 UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=... 170 4e-41 UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyce... 167 2e-40 UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=... 165 1e-39 UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 164 2e-39 UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=F... 163 4e-39 UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 163 5e-39 UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=... 162 6e-39 UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 161 1e-38 UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 ... 159 6e-38 UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydr... 159 6e-38 UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=p... 157 2e-37 UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 T... 155 1e-36 UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=N... 154 2e-36 UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometr... 152 6e-36 UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Ta... 149 9e-35 UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea R... 149 1e-34 UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 148 1e-34 UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 145 1e-33 UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 144 2e-33 UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd s... 142 1e-32 UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q... 135 1e-30 UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=... 131 2e-29 UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japoni... 123 5e-27 UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 ... 119 9e-26 UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=T... 119 1e-25 UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 115 8e-25 UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 114 2e-24 UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=c... 112 7e-24 UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=... 112 1e-23 UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea Rep... 111 1e-23 UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 110 2e-23 UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=T... 110 4e-23 UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 108 9e-23 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 108 2e-22 UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteob... 105 1e-21 UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=S... 105 2e-21 UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collins... 103 3e-21 UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=I... 103 5e-21 UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 102 7e-21 UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 102 7e-21 UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collins... 102 1e-20 UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (Mbx... 100 4e-20 UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 99 8e-20 UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=T... 98 2e-19 UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID... 98 2e-19 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 97 4e-19 UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 97 4e-19 UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacter... 97 4e-19 UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=... 97 4e-19 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 96 1e-18 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 95 2e-18 UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bac... 94 3e-18 UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarch... 93 6e-18 UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN 92 8e-18 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 92 9e-18 UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxi... 92 1e-17 UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, puta... 92 2e-17 UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase sma... 89 8e-17 UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 88 2e-16 UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit ... 87 5e-16 UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetom... 86 1e-15 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 86 1e-15 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 85 1e-15 UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=... 85 1e-15 UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 85 1e-15 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 84 3e-15 UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 83 7e-15 UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meio... 82 1e-14 UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=D... 82 1e-14 UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfit... 81 3e-14 UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobac... 80 6e-14 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 79 9e-14 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 79 1e-13 UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 78 2e-13 UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulf... 78 2e-13 UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 77 4e-13 UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarch... 77 5e-13 UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 ... 76 8e-13 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 76 9e-13 UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 75 2e-12 UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 75 2e-12 UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 74 3e-12 UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 74 3e-12 UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 74 3e-12 UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 72 1e-11 UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=G... 72 1e-11 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 72 1e-11 UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Ep... 71 3e-11 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 71 3e-11 UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteri... 69 1e-10 UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 68 2e-10 UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 67 3e-10 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 67 3e-10 UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 67 4e-10 UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 66 7e-10 UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 66 8e-10 UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermopl... 64 3e-09 UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen l... 64 5e-09 UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacte... 63 6e-09 UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 63 8e-09 UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospiri... 62 1e-08 UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax... 60 4e-08 UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen l... 58 2e-07 UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophi... 55 2e-06 UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 T... 54 3e-06 UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulib... 54 4e-06 UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Glucono... 51 2e-05 UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shige... 51 3e-05 UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO 49 1e-04 UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 48 2e-04 UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax... 48 2e-04 UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subuni... 45 0.002 UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=... 44 0.004 UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota ... 42 0.016 UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax... 42 0.019 UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n... 40 0.040 >UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=Bacteria RepID=NUOB_BLOPB Length = 236 Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 168/225 (74%), Positives = 197/225 (87%), Gaps = 7/225 (3%) Query: 1 MDYTLT--RIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKL----NDMVNWGRKNSI 54 M YTLT R D N E+++YPLQ+++IVTDPLE+ + +NVF GKL + +VNWGR NS+ Sbjct: 1 MKYTLTTARTD-NSEDEQYPLQEKKIVTDPLEKNIQRNVFFGKLSAFLHKIVNWGRGNSL 59 Query: 55 WPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLY 114 WPYNFGLSCCYVEM T+FTA+HDVARFG+EVLRASPRQAD MV+AGT F KM PVIQRLY Sbjct: 60 WPYNFGLSCCYVEMTTAFTAIHDVARFGSEVLRASPRQADFMVIAGTPFLKMVPVIQRLY 119 Query: 115 DQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 DQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF+PVD+YIPGCPPRPEAY+Q L+LL++ Sbjct: 120 DQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDLYIPGCPPRPEAYIQGLLLLKK 179 Query: 175 SIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDE 219 SI +ERRPLSWV+GDQG+YR NM+SER+RKR RIA T L +PD+ Sbjct: 180 SINEERRPLSWVLGDQGIYRKNMESERQRKRNTRIAETVLSSPDD 224 >UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Proteobacteria RepID=NUOB_SHEWM Length = 213 Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 120/212 (56%), Positives = 160/212 (75%), Gaps = 7/212 (3%) Query: 16 RYPLQKQEIV---TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSF 72 R+ L K EI+ T +++ V KN+ + +L D+V WGR NS+WP+NFGLSCCYVEM TSF Sbjct: 2 RWQLSKPEIIPTSTQTMQEVVEKNLLVTRLEDLVAWGRSNSLWPFNFGLSCCYVEMATSF 61 Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 T+ HD+ARFG+EV+RA+PR+ADL+V++GT F KMAPVI+ LYDQMLEPKWVI MG+CANS Sbjct: 62 TSRHDIARFGSEVIRATPREADLIVISGTVFLKMAPVIKHLYDQMLEPKWVICMGSCANS 121 Query: 133 GGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIG----KERRPLSWVVG 188 GGMYD+YSVVQG D+F+P+D+Y+PGCPPRPEA M L LLQE+I ++ RPL+ + Sbjct: 122 GGMYDVYSVVQGADRFLPIDLYVPGCPPRPEALMYGLTLLQEAIKDGAPRQARPLNRTIT 181 Query: 189 DQGVYRANMQSERERKRGERIAVTNLRTPDEI 220 + + ++ R+ K +RI L PDE+ Sbjct: 182 PEEIQAFACRNMRDEKHEQRIKADKLTPPDEV 213 >UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=Proteobacteria RepID=NUOB2_RHOS1 Length = 205 Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 115/190 (60%), Positives = 143/190 (75%), Gaps = 1/190 (0%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 E + + +L+D+V W RK+S+WP+NFGLSCCYVEM T+ T V+D ARFGAEV+R++ Sbjct: 14 EDRMAASHLFTRLDDLVAWSRKHSLWPFNFGLSCCYVEMATALTPVYDQARFGAEVIRST 73 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQADL++V+GT F KMA + RLY QM EP+WVISMGACANSGGMYDIYSVVQGVD F+ Sbjct: 74 PRQADLLIVSGTVFRKMAVPLYRLYSQMREPRWVISMGACANSGGMYDIYSVVQGVDSFL 133 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA-NMQSERERKRGER 208 PVDVY+PGCPPRPEA M+AL+LLQ I E RPL +G+ G R + R+ R R Sbjct: 134 PVDVYVPGCPPRPEALMEALVLLQSKIATEARPLQIRMGETGPARPFDPIPRRDALREAR 193 Query: 209 IAVTNLRTPD 218 +AVT L P+ Sbjct: 194 MAVTRLADPE 203 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 99/163 (60%), Positives = 129/163 (79%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 + + + KN+ + L+D +NWGRKNS+WP FGLSCC+VEM+ S T D+ARFGAEVLR Sbjct: 1 MSESIPKNIILTTLDDAINWGRKNSMWPMFFGLSCCFVEMMGSMTPRFDLARFGAEVLRG 60 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 +PR+ADLMV+AGT F KMA + R+Y++M PKWVI+MG+CANSGGMYD+YSV+QGV++ Sbjct: 61 TPREADLMVIAGTPFKKMAASMLRVYEEMANPKWVIAMGSCANSGGMYDVYSVMQGVNQV 120 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQG 191 +PVDVYIPGCPPRPEA+MQ LM LQE I ++ P V+ +G Sbjct: 121 LPVDVYIPGCPPRPEAFMQGLMTLQEKIARKESPARPVLNLRG 163 >UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_CLOB8 Length = 169 Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 86/149 (57%), Positives = 117/149 (78%), Gaps = 1/149 (0%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +++++ KN+ + KL+D +N+ R +S WP FGL+CC +EM+ + A +D+ARFG EV RA Sbjct: 11 IQEQIEKNIILTKLDDTLNYFRAHSFWPLTFGLACCAIEMMAAGGARYDIARFGYEVFRA 70 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPRQADLM+VAGT KMAP+++++YDQM EPKWVI+MG+CA SGG + D Y+VV G D Sbjct: 71 SPRQADLMIVAGTITEKMAPIVKKIYDQMPEPKWVIAMGSCATSGGPFVDSYNVVPGADT 130 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESI 176 F+PVDVYIPGCPPRPEA + L+ L+E I Sbjct: 131 FLPVDVYIPGCPPRPEALIHGLLTLKEKI 159 >UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=Planctomycetaceae RepID=D2R5G9_9PLAN Length = 192 Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 89/176 (50%), Positives = 127/176 (72%), Gaps = 6/176 (3%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 ++ +NV + KL+++ NW RKNS+WP F +CC +E++ + + HD+ARFGAEV R SPR Sbjct: 4 DLPENVMVTKLDELANWCRKNSLWPMPFATACCGIELMATGASRHDLARFGAEVFRFSPR 63 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPV 151 Q DLM+VAG KM PV+QR++ QM EPKW ISMGACA++GG++D Y+VVQG+D+FIPV Sbjct: 64 QCDLMIVAGRVVMKMLPVLQRIWQQMHEPKWCISMGACASTGGVFDTYAVVQGIDRFIPV 123 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGE 207 D+Y+PGCPPRPE QA++ LQ+ I +E + G++ + + ER+R E Sbjct: 124 DMYVPGCPPRPEQLTQAIIDLQDKIQRE----GTITGEE--FETAARQERKRALQE 173 >UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_ACIBL Length = 213 Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 87/150 (58%), Positives = 116/150 (77%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 ++ + + + L++ VNW RKNSIWP FGL+CC +EM++ + D+ARFGAEV R SP Sbjct: 50 EQPEEGIVLTTLDNAVNWIRKNSIWPMTFGLACCAIEMMSMGASRFDIARFGAEVFRPSP 109 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIP 150 RQ+DLM++AG KMAPVI+ LY QM EPKWVISMGACA SGG+++ Y++VQGV+++IP Sbjct: 110 RQSDLMIIAGRVSQKMAPVIRHLYLQMPEPKWVISMGACATSGGVFNNYALVQGVNQYIP 169 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VD+Y+PGCPPRPE + A+ LLQE I ER Sbjct: 170 VDIYVPGCPPRPEQLIYAITLLQEKIQAER 199 >UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=Bacteria RepID=NUOB2_ACIBL Length = 202 Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 83/148 (56%), Positives = 114/148 (77%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E + KN + ++ + NW RK+S+WP FGL+CC +EM+T+ TA +D+ARFG+EV R Sbjct: 4 IENKFEKNFLLSSVDYVFNWARKSSVWPMTFGLACCAIEMITASTARYDIARFGSEVFRP 63 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 SPRQ+DLM+VAGT KMAPV+QR+Y+QM EPKWV++MGACA+ GG ++ Y+ +QGVDK Sbjct: 64 SPRQSDLMIVAGTVTLKMAPVVQRIYEQMPEPKWVMAMGACASVGGPFNTYATLQGVDKI 123 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESI 176 +PVDVY+ GCPPRPE L+ LQ+ I Sbjct: 124 VPVDVYVVGCPPRPENLFYGLLKLQDKI 151 >UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_FRAAA Length = 281 Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 81/148 (54%), Positives = 114/148 (77%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 LE+++ V + + + NW R++S+WP FGL+CC +EM+++ +D++RFG EV RA Sbjct: 3 LEEKLPGGVLLASVEKLANWSRRSSLWPATFGLACCAIEMMSTGAGRYDLSRFGMEVFRA 62 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 SPRQADLM+VAG KMAPV++++YDQM EPKWV+SMG CA+SGGM++ Y++VQGVD Sbjct: 63 SPRQADLMIVAGRVSQKMAPVLRQIYDQMPEPKWVLSMGVCASSGGMFNNYAIVQGVDHI 122 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESI 176 +PVD+Y+PGCPPRPE M A++ L E I Sbjct: 123 VPVDMYLPGCPPRPEMLMDAIIKLHEKI 150 >UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax=Bacteria RepID=NUOB1_ROSS1 Length = 268 Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 92/153 (60%), Positives = 116/153 (75%), Gaps = 2/153 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 LE E VF+ + NWGR++SIWP +FGL+CC +EM+ + A D+ARFGAE+ RA Sbjct: 9 LEAE-KHGVFLTTMQRFYNWGRRSSIWPLSFGLACCAIEMMATGLARFDLARFGAEMFRA 67 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPRQADLM+VAGT KMAP + RLY+QM EP++VISMGACA SGG + D Y+V++G+D Sbjct: 68 SPRQADLMIVAGTVTKKMAPQVVRLYNQMPEPRYVISMGACATSGGPFRDGYNVLRGIDL 127 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 IPVDVYIPGCPPRPEA + ALM LQ+ I +R Sbjct: 128 LIPVDVYIPGCPPRPEALLHALMTLQKQIDAQR 160 >UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=cellular organisms RepID=NUOB_DEIGD Length = 178 Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 85/158 (53%), Positives = 119/158 (75%) Query: 22 QEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARF 81 +E+ ++ ++ V L +V WGR NS+WP FGL+CC +EM++S +D++RF Sbjct: 4 KELFDRDWQELESEGVLFSTLEKLVAWGRSNSLWPATFGLACCAIEMMSSTDGRNDLSRF 63 Query: 82 GAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSV 141 G+EV RASPRQAD+M+VAG KMAP+++R+YDQM +PKWVISMGACA+SGGM++ Y+V Sbjct: 64 GSEVFRASPRQADVMIVAGRLSKKMAPIMRRVYDQMPDPKWVISMGACASSGGMFNNYAV 123 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 VQ VD +PVDV++PGCPPRPEA + A+M LQ+ + E Sbjct: 124 VQNVDHVVPVDVFVPGCPPRPEALIYAVMQLQKKVRGE 161 >UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax=Bacteria RepID=NUOB2_OPITP Length = 191 Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 89/163 (54%), Positives = 119/163 (73%), Gaps = 4/163 (2%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 T + EV++ KL+D++ GR NS+WP FGL+CC +EM+ + A D++RFGAEV Sbjct: 25 TPEIPPEVSQIARFAKLDDLLALGRANSLWPLTFGLACCAIEMMAAGMARFDISRFGAEV 84 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI---YSVV 142 R SPRQAD+M+VAGT KMAP ++ LYDQMLEPKWVI+MG CA SGG + Y+VV Sbjct: 85 FRPSPRQADVMIVAGTVNKKMAPAVKLLYDQMLEPKWVIAMGQCAISGGPFKYPGQYAVV 144 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI-GKERRPLS 184 +GVD+ PVDVY+PGCPPRPEA ++ ++ L+E I GK R P++ Sbjct: 145 EGVDQLFPVDVYVPGCPPRPEALIEGILKLEEKITGKRRFPVA 187 >UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOB1_THEYD Length = 199 Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 89/194 (45%), Positives = 130/194 (67%), Gaps = 12/194 (6%) Query: 23 EIVTDPLEQEVN------KNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVH 76 + VT+P+E E N + L+ + +WGR +S+WP FGL+CC +EM+ + + + Sbjct: 6 DTVTEPVEIEQGIKIVPAANTIITTLDKIASWGRCSSLWPLTFGLACCAIEMMATAASHY 65 Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG ++RA+PRQAD+M++AGT KMAPVI LY QM EP++VI+MG+CA SGG++ Sbjct: 66 DLDRFGI-IMRATPRQADVMIIAGTVTKKMAPVIVNLYHQMPEPRYVIAMGSCACSGGIF 124 Query: 137 DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVG-----DQG 191 + YS VQGVD+ +PVDVYIPGCPPRPEA ++ L+ LQE I E + + D+ Sbjct: 125 NTYSTVQGVDEILPVDVYIPGCPPRPEALIEGLLKLQEKIKTEPHKKTGCLSGVCLIDKS 184 Query: 192 VYRANMQSERERKR 205 R + +S R+ K+ Sbjct: 185 QRRCSYESCRDNKK 198 >UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=Bacteria RepID=NUOB1_OPITP Length = 171 Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 82/151 (54%), Positives = 108/151 (71%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 + + + K + ++NW R NS+WP GL+CC +E++ D+ARFGAEV+R S Sbjct: 11 SSAIEGGIVVSKADAVINWIRTNSMWPMPMGLACCAIELMQVGNGRFDIARFGAEVMRFS 70 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQ+D M+VAG+ KMAP I+R+YDQM+ PKWVI+MGACA+SGGMY Y+ +QGVD+ + Sbjct: 71 PRQSDCMIVAGSVTYKMAPQIRRIYDQMMSPKWVIAMGACASSGGMYRSYAHMQGVDRIL 130 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 PVDVYI GCPPRPE + ALM LQ I ER Sbjct: 131 PVDVYISGCPPRPEGILDALMKLQAKIRTER 161 >UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Z3_GEMAT Length = 212 Score = 182 bits (462), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 78/140 (55%), Positives = 109/140 (77%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 +L+ +VNWGR S+WP FG +CC +E + + + D++RFG E L SPRQAD+++ AG Sbjct: 30 RLDFLVNWGRAGSLWPMPFGTACCAIEFMATAASRFDLSRFGMERLSYSPRQADVLLCAG 89 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP 160 K+APV++R+Y QM +PKWVISMGACA++GGM+D Y+VVQG+D IPVDVY+PGCPP Sbjct: 90 RVPLKLAPVLRRIYQQMPQPKWVISMGACASTGGMFDNYAVVQGIDTIIPVDVYVPGCPP 149 Query: 161 RPEAYMQALMLLQESIGKER 180 RPEA M A+++LQ+ + +ER Sbjct: 150 RPEALMHAIIMLQKKVMQER 169 >UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Eukaryota RepID=NDUS7_RECAM Length = 182 Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%) Query: 29 LEQEVNKNVFM-GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR 87 L + NK F+ K++++VNW RK S+WP FGL+CC VEM+ S + +D+ RFG + R Sbjct: 22 LNNKQNKTEFIVSKMDELVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLDRFGI-IFR 80 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVD 146 SPRQ+D+M+VAGT KMAP ++++YDQM EP+WV+SMG+CAN GG Y YSVV+G D Sbjct: 81 PSPRQSDVMIVAGTLTNKMAPALRKVYDQMSEPRWVVSMGSCANGGGYYHYSYSVVRGCD 140 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 + +PVD+Y+PGCPP EA + L+ LQ+ I + R+ L W+ Sbjct: 141 RIVPVDIYVPGCPPTAEALLYGLLQLQKKIKRSRKTLYWL 180 >UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=Dehalococcoides RepID=NUOB_DEHSC Length = 200 Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 83/151 (54%), Positives = 110/151 (72%), Gaps = 1/151 (0%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 +E VF+ + ++NW R S+WP FGL+CC +EM+ + D+ARFG ++ RASP Sbjct: 46 EEPPPGVFITSVEKVLNWSRHYSLWPVMFGLACCAIEMMCMAASRWDLARFGMDIFRASP 105 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFI 149 RQADLM+VAGT KMAP ++R+YDQM EPKWV++MGAC SGG++ D YSVV G + + Sbjct: 106 RQADLMIVAGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGGLFRDSYSVVPGFNLVV 165 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 PVDVY+PGCPPRPEA M+A+M + E I K R Sbjct: 166 PVDVYVPGCPPRPEALMRAIMDIHEKIDKTR 196 >UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_HELMI Length = 175 Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 81/149 (54%), Positives = 110/149 (73%), Gaps = 1/149 (0%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +++ + KN+ M L + NW R NS+WP + GL+CC +EM+ + + D+ARFG EV R Sbjct: 15 VDELIKKNIIMTSLEAVFNWARGNSLWPLSSGLACCAIEMMATGASRFDMARFGYEVFRP 74 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPRQADL+++AGT KMAP IQR+Y+QM EPKW+I+MG+CA +GG + D Y+VV GVDK Sbjct: 75 SPRQADLIIIAGTLTWKMAPAIQRVYEQMPEPKWIIAMGSCACTGGPFADSYAVVPGVDK 134 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESI 176 IPVDVY+PGCPPRPEA + + L+ I Sbjct: 135 VIPVDVYVPGCPPRPEALLDGFLKLKAKI 163 >UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=2 Tax=Bacteria RepID=UPI00016C3AA7 Length = 201 Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 77/143 (53%), Positives = 110/143 (76%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 + + L+ + N RK+S+WP F +CC +E++ + ++ +D+ARFG+E +R SPRQ D+ Sbjct: 9 DFMIAPLDYLANMARKHSLWPMPFATACCGIELMATASSRYDIARFGSEAMRFSPRQCDV 68 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYI 155 M+VAG KM PV+QR++ QM EPKW ISMGACA+SGG++D Y+VVQG+D+FIPVDVY+ Sbjct: 69 MIVAGRVAMKMVPVMQRIWLQMPEPKWCISMGACASSGGVFDTYAVVQGIDRFIPVDVYV 128 Query: 156 PGCPPRPEAYMQALMLLQESIGK 178 PGCPPRPE ++A++ LQE I K Sbjct: 129 PGCPPRPEQLIRAVLDLQEKIQK 151 >UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=Bacteria RepID=NUOB_RUBXD Length = 251 Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 88/176 (50%), Positives = 121/176 (68%), Gaps = 7/176 (3%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 N+ + + NW RKNS+WP FGL+CC +EM+++ A +D+ RFGA SPRQAD+ Sbjct: 11 NIITTSTDKLFNWARKNSLWPLQFGLACCAIEMMSTGMAHNDLERFGAGFFAGSPRQADV 70 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVY 154 M+V+GT TKMA + RLY+QM EPKWVI+MGACA SGG + D YSV+ G D+ IPVDVY Sbjct: 71 MIVSGTVSTKMAERMTRLYEQMPEPKWVIAMGACAISGGPFLDGYSVLMGADRVIPVDVY 130 Query: 155 IPGCPPRPEAYMQALMLLQESIGKER-----RPLSWVVGDQGVYRANMQSERERKR 205 +PGCPPRPEA + +M LQ+ I +E+ +P +V ++G R + ERE ++ Sbjct: 131 VPGCPPRPEALIFGIMTLQKKIEREQQVGYEKPRPALVDEEGNIREYL-PEREYRQ 185 >UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=Bacteroidales RepID=NUOB_BACV8 Length = 198 Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 83/150 (55%), Positives = 108/150 (72%), Gaps = 1/150 (0%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 E V +G L+D++NWGR NS+WP F SCC +E + A +D ARFG EV RASPR Sbjct: 31 EGGTKVLVGCLDDLINWGRSNSLWPLTFATSCCGIEFMAVGAARYDFARFGFEVARASPR 90 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIP 150 QAD+++VAGT KMAPV++RLYDQM +PK+VI++G CA SGG + Y V+ GVDK +P Sbjct: 91 QADMIMVAGTITHKMAPVLKRLYDQMADPKYVIAVGGCAISGGPFKKSYHVLNGVDKILP 150 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VDVYIPGCPPRPEA + ++ LQ + E+ Sbjct: 151 VDVYIPGCPPRPEALLYGMIQLQRKVKLEK 180 >UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria RepID=A3THJ2_9MICO Length = 198 Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 79/152 (51%), Positives = 108/152 (71%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 LE+++ + L + + RK SIWP FGL+CC +EM+ T +D+ARFG E A Sbjct: 3 LEEKLPAGFVLTTLESVAGYMRKASIWPATFGLACCAIEMMAVGTPDYDIARFGMERFSA 62 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 +PRQADLM+VAG KMAPV++++YDQM PKWVISMG CA+SGGM++ Y++VQGVD Sbjct: 63 TPRQADLMIVAGRVSNKMAPVVRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVDHI 122 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 IPVD+Y+PGCPPRPE + A++ L + I + Sbjct: 123 IPVDIYLPGCPPRPEMLLNAIIELHDQIQNSK 154 >UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ6_FIBSS Length = 211 Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 73/144 (50%), Positives = 107/144 (74%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 N+ L+ +VNWGR NS+WP+ +G +CC +E +++ +D++R G+E +R +PRQ+D+ Sbjct: 9 NIITSSLDFLVNWGRSNSLWPFPYGTACCAIEFMSTEVGRYDLSRIGSEYVRFTPRQSDV 68 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYI 155 ++VAGT K AP+++R+Y+QM EP+WVI+MGACA+SGG YD Y V G+D IPVDVYI Sbjct: 69 LLVAGTITYKQAPILKRIYEQMAEPRWVIAMGACASSGGFYDCYCTVPGIDHIIPVDVYI 128 Query: 156 PGCPPRPEAYMQALMLLQESIGKE 179 GCPPRPEA+ A+ LQ+ + E Sbjct: 129 GGCPPRPEAFFDAMFDLQKKVKDE 152 >UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax=Bacteria RepID=NUOB2_STRGG Length = 235 Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 80/148 (54%), Positives = 104/148 (70%), Gaps = 1/148 (0%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 ++NWGR+ S+W +NFGL+CC +E + + A HD R G PRQADLM+V+GT Sbjct: 45 VLNWGRRYSLWVFNFGLACCAIEFIAASMARHDFIRLGVIPFAPGPRQADLMIVSGTVTD 104 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 KMAP ++RLY+QM EPK+VIS GAC+N GG Y D YSV +GVD+ IPVDVY+PGCPPRPE Sbjct: 105 KMAPAVKRLYEQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPE 164 Query: 164 AYMQALMLLQESIGKERRPLSWVVGDQG 191 A +Q ++ LQE I +E + G G Sbjct: 165 ALLQGILKLQEKIARESLAERYATGATG 192 >UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=cellular organisms RepID=C9RKY2_FIBSS Length = 419 Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 82/150 (54%), Positives = 108/150 (72%), Gaps = 2/150 (1%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 ++ +VNW R NSIWP +G SCC +EM++S A +D+ARFG+EV R+SPRQADL ++AGT Sbjct: 24 IDYVVNWARANSIWPLTYGTSCCAIEMMSSSMARYDIARFGSEVFRSSPRQADLFILAGT 83 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGG--MYDIYSVVQGVDKFIPVDVYIPGCP 159 +MAP IQ L++Q+ PK+VI+MGAC SGG +YD YSVV+G IPVDV++PGCP Sbjct: 84 ITRRMAPAIQMLWEQIPGPKYVIAMGACTISGGPFIYDNYSVVRGAQNLIPVDVFVPGCP 143 Query: 160 PRPEAYMQALMLLQESIGKERRPLSWVVGD 189 PRPEA L+ L+E I KE W G+ Sbjct: 144 PRPEALFHGLLTLREKILKETCRNPWHEGE 173 >UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=638 Tax=cellular organisms RepID=NDUS7_HUMAN Length = 213 Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 80/148 (54%), Positives = 109/148 (73%), Gaps = 2/148 (1%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + KL+D+VNW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQ+D+M+V Sbjct: 64 VAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQSDVMIV 122 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPG 157 AGT KMAP ++++YDQM EP++V+SMG+CAN GG Y YSVV+G D+ +PVD+YIPG Sbjct: 123 AGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPG 182 Query: 158 CPPRPEAYMQALMLLQESIGKERRPLSW 185 CPP EA + ++ LQ I +ERR W Sbjct: 183 CPPTAEALLYGILQLQRKIKRERRLQIW 210 >UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_SALRD Length = 213 Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 79/146 (54%), Positives = 105/146 (71%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 + F +++ +NW R NS+ P GL+CC +EM+ +D ARFG+E +R SPRQA Sbjct: 9 GQGFFTTRVDTFLNWARSNSLMPMPMGLACCAIEMMGFAGPKYDSARFGSEAMRFSPRQA 68 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 DLM+VAG C KM+ I+R++DQM +PKW I+MGACA++GGM+ Y VVQGVD F+PVDV Sbjct: 69 DLMIVAGWCSYKMSHAIRRVWDQMGDPKWCIAMGACASTGGMHRCYGVVQGVDNFLPVDV 128 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKE 179 YI GCPPRPE+ + ALM +QE I E Sbjct: 129 YISGCPPRPESVLHALMDIQEKIRNE 154 >UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6Y4_9PLAN Length = 227 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 81/154 (52%), Positives = 108/154 (70%), Gaps = 2/154 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E V +NVF + +NW R++SIWP FGL+CC +EM+ + + +D+ RFGA RA Sbjct: 26 IEARVEENVFTTSVEQAINWARQSSIWPMTFGLACCAIEMMAAGASRYDMDRFGAGAFRA 85 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI--YSVVQGVD 146 +PRQADLM+VAGT KMA ++RLY+ M +PK+VI+MGAC GG Y Y VV+GVD Sbjct: 86 TPRQADLMIVAGTVTYKMASRVRRLYNMMPDPKFVIAMGACTVGGGPYFKWGYHVVKGVD 145 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +PVDVYIPGCPPRPEA ++ LM +Q+ I R Sbjct: 146 LVVPVDVYIPGCPPRPEALLEGLMRIQDKIKGHR 179 >UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=Firmicutes RepID=NUOB_DESRM Length = 196 Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 84/147 (57%), Positives = 107/147 (72%), Gaps = 2/147 (1%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVE-MVTSFTAVHDVARFGAEVLRASP 90 EV + V +G L ++N R NS+WP FGL+CC +E ++ + A D+ARFG EV+RASP Sbjct: 38 EVARTVSVGPLEKLLNLARANSLWPMGFGLACCAIEGLMAANMARFDLARFGYEVMRASP 97 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFI 149 RQAD+M+V GT K AP + RLY+QM EPK+VI+MG+CA SGG + D YSVV GVDK I Sbjct: 98 RQADVMLVCGTVTKKAAPFVVRLYEQMAEPKYVIAMGSCAISGGPFVDSYSVVPGVDKLI 157 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESI 176 PVDVYIPGC PRP+A + M L+E I Sbjct: 158 PVDVYIPGCAPRPDAVIHGFMKLKEKI 184 >UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=57 Tax=cellular organisms RepID=NDUS7_MOUSE Length = 224 Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 77/146 (52%), Positives = 108/146 (73%), Gaps = 2/146 (1%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 KL+D++NW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQAD+M+VAG Sbjct: 77 KLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQADVMIVAG 135 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCP 159 T KMAP ++++YDQM EP++V+SMG+CAN GG Y YSVV+G D+ +PVD+Y+PGCP Sbjct: 136 TLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCP 195 Query: 160 PRPEAYMQALMLLQESIGKERRPLSW 185 P EA + ++ LQ I +E++ W Sbjct: 196 PTAEALLYGILQLQRKIKREQKLKIW 221 >UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=cellular organisms RepID=NUOB_LEPBA Length = 186 Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 75/138 (54%), Positives = 108/138 (78%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + L+++V WG+ S+WPY F +CC +E +++ A +D+ARFGAE SPRQAD+++V Sbjct: 20 VATLDNVVQWGQSFSLWPYPFATACCGIEYMSTACADYDIARFGAERPSFSPRQADMILV 79 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGC 158 GT KMAPV++++YDQ+ EPK+VIS+GACA+SGGM+ Y V+QGVD+ +PVDVY+PGC Sbjct: 80 LGTITYKMAPVLRQIYDQLAEPKFVISVGACASSGGMFHTYGVLQGVDRILPVDVYVPGC 139 Query: 159 PPRPEAYMQALMLLQESI 176 PPRPEA + AL+ LQ+ + Sbjct: 140 PPRPEAILDALVKLQKKV 157 >UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=Actinomycetales RepID=NUOB1_SALAI Length = 188 Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 79/136 (58%), Positives = 99/136 (72%), Gaps = 1/136 (0%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 ++NWGR+ S+W +NFGL+CC +E + + + HD R G PRQADLMVV+GT Sbjct: 14 VLNWGRRYSLWVFNFGLACCAIEFIATSMSRHDFMRLGVIPFAHGPRQADLMVVSGTVTD 73 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 KMAP I+RLYDQM EPK+VIS GAC+N GG Y D YSV +GVD+ IPVDVY+PGCPPRPE Sbjct: 74 KMAPAIKRLYDQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQLIPVDVYVPGCPPRPE 133 Query: 164 AYMQALMLLQESIGKE 179 A + ++ LQE I E Sbjct: 134 ALLHGILRLQEKIAAE 149 >UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=cellular organisms RepID=NUOB_GRABC Length = 194 Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 83/161 (51%), Positives = 112/161 (69%), Gaps = 3/161 (1%) Query: 18 PLQKQEIVTDPLEQEV-NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVH 76 P QE V + E+ +K + L+ +VNW R S+WP FGL+CC VEM+ ++ + Sbjct: 26 PGPGQEAVLRGITGEMADKGFVVANLDKLVNWARTGSLWPMTFGLACCAVEMIHAYMPRY 85 Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG + RASPRQ+D+M+VAGT KMAP ++R+YDQM EP+WVISMG+CAN GG Y Sbjct: 86 DLDRFGV-IPRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRWVISMGSCANGGGYY 144 Query: 137 DI-YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 YSVV+G D+ +PVDVY+PGCPP EA + +M LQ+ I Sbjct: 145 HYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGIMQLQKKI 185 >UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cystobacterineae RepID=NUOB_MYXXD Length = 187 Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 77/145 (53%), Positives = 106/145 (73%), Gaps = 4/145 (2%) Query: 39 MGKLNDMVN----WGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQAD 94 MG L +V+ W RK S++ Y + +CC +E ++ + HD++RFGAE R SPRQAD Sbjct: 18 MGWLQSIVSKGLGWARKYSLFTYPYATACCGMEYMSVAASRHDISRFGAEFPRFSPRQAD 77 Query: 95 LMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVY 154 L++V GT K AP+++R+Y+QM EPKWV++ G CA+SGG YD Y+V+QG+D+ IPVDVY Sbjct: 78 LLMVVGTINLKQAPILKRVYEQMAEPKWVVAFGVCASSGGFYDNYAVLQGIDRIIPVDVY 137 Query: 155 IPGCPPRPEAYMQALMLLQESIGKE 179 IPGCPPRPE + LMLLQ+ IG + Sbjct: 138 IPGCPPRPEQVLDGLMLLQDKIGNQ 162 >UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=Sphingobacteriales RepID=C7PSH0_CHIPD Length = 187 Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 71/146 (48%), Positives = 107/146 (73%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 + F + ++ RKNSIWP F SCC +E + + + +D++RFG+E + +PRQ Sbjct: 22 GEGFFATTFDQVIGLARKNSIWPLPFATSCCGIEFMATMASTYDMSRFGSERMAFTPRQC 81 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 DL++V GT KMAPV++++Y QM EP+WV+++GACA+SGG++D YSV+QG+D+ IPVDV Sbjct: 82 DLLMVMGTISKKMAPVLRQVYLQMAEPRWVVAVGACASSGGVFDTYSVLQGIDQVIPVDV 141 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKE 179 Y+PGCPPRPEA + M +Q+ +G+E Sbjct: 142 YVPGCPPRPEAIIDGFMRVQDLVGQE 167 >UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteroidales RepID=NUOB_AZOPC Length = 191 Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 78/142 (54%), Positives = 101/142 (71%), Gaps = 1/142 (0%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 N+ + KLND++NWGR NS+WP F SCC +E + A +D ARFG EV R SPRQAD+ Sbjct: 25 NIAIAKLNDLINWGRSNSVWPLTFATSCCGIEFMCLGAARYDFARFGWEVTRNSPRQADV 84 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVY 154 + GT KMAPV++RLYDQM EPK+VI++G+CA SGG + Y + G+DK IPVDVY Sbjct: 85 VFCCGTIVHKMAPVLKRLYDQMSEPKYVIALGSCAISGGPFKSSYHTIMGIDKIIPVDVY 144 Query: 155 IPGCPPRPEAYMQALMLLQESI 176 IPGCPPRP+A + ++ L I Sbjct: 145 IPGCPPRPDAMIYGMIQLARKI 166 >UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Tax=cellular organisms RepID=NDHK_THEEB Length = 237 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 81/169 (47%), Positives = 110/169 (65%), Gaps = 3/169 (1%) Query: 14 NDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFT 73 N P I + QE+ +N+ + LND+ +W R +S+WP +G +CC++E Sbjct: 3 NTTSPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMIG 62 Query: 74 AVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSG 133 + D RFG V R SPRQADL++ +GT KMAP + RLY+QM PK+VI+MGAC +G Sbjct: 63 SRFDFDRFGL-VPRNSPRQADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTITG 121 Query: 134 GMY--DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 GM+ D YS V+GVDK IPVDVY+PGCPPRPEA M A++ L++ I E Sbjct: 122 GMFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIVKLRKKIANEH 170 >UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31273 Length = 229 Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 76/174 (43%), Positives = 116/174 (66%), Gaps = 9/174 (5%) Query: 11 NGENDRYPLQKQ--------EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLS 62 G + + +Q+Q ++ LEQ V + V L+ + W R NS++P FGL+ Sbjct: 14 EGGGEEFRIQQQRARDMLRGDLTDRELEQYVEERVLTTTLDKVTAWARGNSMFPATFGLA 73 Query: 63 CCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKW 122 CC +EM++ A D+ RFG E RASPRQAD+++++G KMAP+++R+YDQMLEP+W Sbjct: 74 CCAIEMMSLPGARLDIGRFGFEAFRASPRQADMLILSGRVSIKMAPIVRRIYDQMLEPRW 133 Query: 123 VISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 ISMGAC +S G+++ Y++V DKF+P+DV++PGCPPRPEA A++ L+ + Sbjct: 134 AISMGACCSSMGVFNNYALVP-ADKFMPIDVHVPGCPPRPEALAHAILKLRSKV 186 >UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCK3_PLALI Length = 225 Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 2/150 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E +N+ + L +NWG+ +S+WP FG++CC +EM+ + + +D+ RFG+ RA Sbjct: 28 IEGRFEENLIVTTLEQAMNWGQLSSVWPLTFGIACCAMEMMATGMSKYDLDRFGSGAFRA 87 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYS--VVQGVD 146 +PRQADLM+VAGT KMA I+RLYDQM +PK+VI+MGAC GG Y Y VV+GVD Sbjct: 88 TPRQADLMIVAGTVTYKMASRIRRLYDQMPDPKYVIAMGACTIGGGPYFKYGYHVVKGVD 147 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 +PVDVYIPGCPPRPEA ++ +M +Q+ I Sbjct: 148 LVVPVDVYIPGCPPRPEALLEGVMRIQDKI 177 >UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=Myxococcales RepID=NUOB2_SORC5 Length = 182 Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 81/172 (47%), Positives = 113/172 (65%), Gaps = 11/172 (6%) Query: 10 PNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMV 69 P G +Y ++T ++Q VN ++NWGR NS+W FGL+CC +E++ Sbjct: 11 PRGWEAKYESDGGGVITTSVDQTVNW---------LLNWGRSNSVWYMLFGLACCAIELM 61 Query: 70 TSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGAC 129 + D+ RFGA R SPR +DL ++AGT KMA ++RLYDQM EP++VISMG+C Sbjct: 62 QTGGPRGDLERFGAAP-RPSPRSSDLFIIAGTLTYKMATRVKRLYDQMSEPRFVISMGSC 120 Query: 130 ANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +N GG++ YSV +GVD+ IPVDVY+PGCPPRPEA ++ L+ +QE I ER Sbjct: 121 SNCGGLFQYAYSVCKGVDQIIPVDVYVPGCPPRPEALLEGLLKIQEKIKSER 172 >UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_HYDS0 Length = 177 Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 70/153 (45%), Positives = 110/153 (71%), Gaps = 2/153 (1%) Query: 29 LEQEVNKNVFMGK-LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR 87 + +N N F+ ++++++WGR+N++WP GL+CC +EM+ + + D+ R G + R Sbjct: 1 MASSINGNGFITTTVDELLSWGRRNALWPVTIGLACCAIEMMHAAASRFDIDRLGM-IFR 59 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDK 147 ASPRQAD+++VAGT K+AP+++ ++DQM EPKW ISMG CA++GG + YS +QG+D+ Sbjct: 60 ASPRQADVLIVAGTVVNKVAPMLKLVWDQMPEPKWCISMGGCASAGGPFPTYSTLQGIDR 119 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 IPVDVYIPGCPP P+ + L+ LQ I +++ Sbjct: 120 IIPVDVYIPGCPPTPQGLIYGLLELQRKIREKK 152 >UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=Flavobacteriaceae RepID=C6X0Z2_FLAB3 Length = 185 Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 70/148 (47%), Positives = 102/148 (68%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 +P E + F KL+ ++ RK S+WP F SCC +E + +D +RFG E Sbjct: 12 AEPPEGFEGEGFFATKLSSVIGMARKYSLWPLPFATSCCGIEFMAVLNPTYDASRFGMER 71 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGV 145 SPRQAD+++V GT K+ PV++++Y QM EP+WV+++GACA+SGG++D YSV+QG+ Sbjct: 72 NSFSPRQADMLMVCGTISKKLGPVLKQVYTQMAEPRWVVAVGACASSGGIFDTYSVLQGI 131 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 DK IPVDVY+PGCPPRPE ++ +M +Q Sbjct: 132 DKIIPVDVYVPGCPPRPEQIIEGVMQVQ 159 >UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Ajellomyces dermatitidis RepID=C5GDP9_AJEDR Length = 245 Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 78/158 (49%), Positives = 107/158 (67%), Gaps = 3/158 (1%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 E+ F+G ++ + NWGR+ S+WP + GL+CC +EM+ +D R G + RAS Sbjct: 86 EKTGTMGHFLGSIDAVANWGRQASLWPISLGLACCGLEMMAVSMPRYDQDRLG-TIFRAS 144 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKF 148 PRQ+DL++VAGT KMAP ++ +YDQM +PKWVISMG+CAN GG Y YSVV+GVD+ Sbjct: 145 PRQSDLLIVAGTVTNKMAPALRLVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGVDRL 204 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQES-IGKERRPLSW 185 +PVDVY+PGCPP EA M A+ +++ I K R W Sbjct: 205 LPVDVYLPGCPPTAEALMYAISVVRRKLIVKSRTTRIW 242 >UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=Bacteria RepID=NUOB2_CHLT3 Length = 195 Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 79/155 (50%), Positives = 112/155 (72%), Gaps = 4/155 (2%) Query: 29 LEQEVNKN-VFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR 87 L+Q+ +K V + +++NW R +S+WP FGL+CC +EM+ + + +D+ RFG R Sbjct: 4 LDQKFDKGGVVITAAENVLNWARLSSLWPMGFGLACCAIEMMATNASNYDLERFGI-FPR 62 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGV 145 +SPRQ+DLM+VAGT KMA + RLY+QM EP++V+SMG+C+N GG Y Y VV+GV Sbjct: 63 SSPRQSDLMIVAGTVTFKMAERVVRLYEQMPEPRYVLSMGSCSNCGGPYWEHGYHVVKGV 122 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 D+ IPVDVY+PGCPPRPEA + LM +QE I +E+ Sbjct: 123 DRIIPVDVYVPGCPPRPEALIGGLMKVQELIREEK 157 >UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_SORC5 Length = 194 Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 71/141 (50%), Positives = 100/141 (70%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 +++ ++NW +K S++ Y F +CC +E + + D+ARFGAEV R SPRQADL+ V G Sbjct: 25 RVDALLNWAKKYSLFQYPFVTACCGMEYMAMASPRFDMARFGAEVPRFSPRQADLLWVVG 84 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP 160 T + AP ++R+Y+QM +PKWV++ G CA+ GG YD Y+ V G+DK IP DVY+PGCPP Sbjct: 85 TISQRQAPALKRIYEQMADPKWVLAFGTCASCGGFYDNYTTVAGIDKVIPCDVYVPGCPP 144 Query: 161 RPEAYMQALMLLQESIGKERR 181 RPEA + LMLLQ+ I + R Sbjct: 145 RPEAVLDGLMLLQDKIARGDR 165 >UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 Tax=cellular organisms RepID=NDHK2_CYAP4 Length = 259 Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 72/150 (48%), Positives = 105/150 (70%), Gaps = 3/150 (2%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 E+++N+ + L+D+ NW R +SI+P +G +CC++E + D+ RFG RASPR Sbjct: 21 ELSENIILTSLDDIYNWARISSIYPLMYGTACCFIEFAAMIASRFDMERFGM-FPRASPR 79 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVDKFI 149 QADL+++AGT +MA +RLYDQM EPK+VI+MGAC +GGM+ D + ++G DK + Sbjct: 80 QADLIILAGTLTMQMAVPTRRLYDQMPEPKYVIAMGACMITGGMFSADSPTALRGADKLL 139 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 P+DVYIPGCPPRPEA + A+ L++ I E Sbjct: 140 PIDVYIPGCPPRPEAILDAVTKLRKKIANE 169 >UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydrogenasei, chain b) (Ndh-1, chain b) n=1 Tax=Persephonella marina EX-H1 RepID=C0QR84_PERMH Length = 181 Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 64/140 (45%), Positives = 103/140 (73%), Gaps = 1/140 (0%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 N + + + ++++WGR+NS+WP + GL+CC +EM+ + + D R G + R SPRQ+ Sbjct: 6 NNGIILTTVEEVLSWGRRNSLWPASVGLACCAIEMMHTAASRFDTDRLGI-IFRGSPRQS 64 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 D+++VAGT K+AP+++ +YDQM +PKWVI+MG C+++GG + Y+ +QGVD+ IPVDV Sbjct: 65 DVLIVAGTVVNKVAPMLKLIYDQMPDPKWVIAMGGCSSAGGPFPTYATLQGVDRIIPVDV 124 Query: 154 YIPGCPPRPEAYMQALMLLQ 173 Y+PGCPP P+A + ++ LQ Sbjct: 125 YVPGCPPTPQALLWGILELQ 144 >UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=pseudomallei group RepID=A5TDF9_BURMA Length = 293 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/157 (49%), Positives = 104/157 (66%), Gaps = 3/157 (1%) Query: 24 IVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGA 83 + PL E + L+ + +KNS+W FGL+CC VEM+ + A +D+ RFG Sbjct: 127 MANHPLTLE-KDGFIVTTLDAAMAAAQKNSLWYMTFGLACCAVEMMHAAGARYDMDRFG- 184 Query: 84 EVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVV 142 + RASPRQ DLM+VAGT KMAP ++R+YDQM EP++V+SMG+CAN GG Y YSVV Sbjct: 185 MIPRASPRQCDLMIVAGTLTNKMAPAMRRVYDQMAEPRYVVSMGSCANGGGYYHYSYSVV 244 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 +G D+ +PVDVY+PGCPP EA + LM LQ + + Sbjct: 245 RGCDRIVPVDVYVPGCPPTAEALVYGLMQLQRKVAER 281 >UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 Tax=Halobacteriaceae RepID=B0R3U2_HALS3 Length = 235 Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 71/148 (47%), Positives = 107/148 (72%), Gaps = 2/148 (1%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + K + +NW R +S++ FG++CC +EM+ +++ HD+ RF A V RASPRQAD+M+V Sbjct: 48 LTKFDKFMNWVRGSSMFMLQFGIACCSIEMMHTYSVKHDLDRFHAGVPRASPRQADVMIV 107 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPG 157 GT +K AP ++R+YDQM EPK+V++MG C+ SGG + + Y+VV+G ++ IPVD++IPG Sbjct: 108 PGTIVSKFAPRMKRVYDQMPEPKFVVNMGNCSTSGGPFQEGYNVVKGAEEVIPVDIHIPG 167 Query: 158 CPPRPEAYMQALMLLQESIGK-ERRPLS 184 CPPRPEA + + LQE I E P++ Sbjct: 168 CPPRPEALVYGVAKLQERIANGESSPVT 195 >UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A345_NITMS Length = 174 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 79/160 (49%), Positives = 104/160 (65%), Gaps = 13/160 (8%) Query: 34 NKNVFMGKLNDM------------VNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARF 81 N NVF+GKL D+ +NWGR S+WP + +CC VE + + +DV RF Sbjct: 10 NANVFVGKLGDILEKAIDKPLGYAINWGRIWSLWPVHIETACCSVEFGAASSPRYDVERF 69 Query: 82 GAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYS 140 G S RQ DL+VV GT KMAP ++ +YDQM EPK+VI+MGACA +GG+Y D Y+ Sbjct: 70 GIIEAFGSLRQCDLVVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYN 129 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 V+ G+D IPVDVY+PGCPPRPE +Q +LLQE I + + Sbjct: 130 VLPGIDGVIPVDVYVPGCPPRPETLIQGCILLQEKIKRMK 169 >UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VB41_9EURY Length = 236 Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 108/148 (72%), Gaps = 2/148 (1%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + K ++ +NW R +S++ FG++CC +EM+ +++ HD+ RF A V RASPRQAD+++V Sbjct: 49 LTKFDNFMNWVRGSSMFMLQFGIACCSIEMMHTYSVKHDLDRFAAGVPRASPRQADVIIV 108 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPG 157 GT +K AP ++R+YDQM EPK+V+ MG+C SGG + + Y+V++G ++ IPVD+++PG Sbjct: 109 PGTIVSKFAPRMKRVYDQMPEPKFVVGMGSCTVSGGPFQEGYNVIKGAEEVIPVDIHVPG 168 Query: 158 CPPRPEAYMQALMLLQESIGK-ERRPLS 184 CPPRPEA + + LQ+ I + E P++ Sbjct: 169 CPPRPEALIYGVAKLQQRIAEGESSPVT 196 >UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Tax=Thaumarchaeota RepID=A0RY66_CENSY Length = 160 Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 77/155 (49%), Positives = 101/155 (65%), Gaps = 6/155 (3%) Query: 27 DPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL 86 D LE+ ++K L +NWGR S+WP + +CC VE + +DV RFG Sbjct: 6 DILEKAIDK-----PLGYAINWGRIWSLWPVHIETACCSVEFGAASGPKYDVERFGIIEA 60 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGV 145 S RQ DL+VV GT KMAP ++ +YDQM EPK+VI+MGACA +GG+Y D Y+V+ G+ Sbjct: 61 FGSLRQCDLIVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGI 120 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 D +PVDVY+PGCPPRPE +Q MLLQE I + R Sbjct: 121 DGVLPVDVYVPGCPPRPETLIQGCMLLQEKIKRMR 155 >UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea RepID=A0B811_METTP Length = 190 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 69/152 (45%), Positives = 105/152 (69%), Gaps = 3/152 (1%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 +++++ + MG + +++NWGRKNS+W + CC VEM+ +D RFG + RA+P Sbjct: 36 EKIHQIIQMGPIKNVLNWGRKNSLWFLMQPMGCCGVEMLVFGCPHYDCDRFGI-IPRATP 94 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGG-MYDIYSVVQGVDKFI 149 RQAD+M+++G K P I+ L++QMLEPKW I++G CA SGG YD Y+++Q F Sbjct: 95 RQADVMIISGYITRKYLPAIKNLWEQMLEPKWCIAVGECAISGGPFYDSYNIIQNTSDFF 154 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 P+DVY+PGCPPRPE +++ + LQE I K+R+ Sbjct: 155 PIDVYVPGCPPRPEQFIKGFVELQEKI-KQRK 185 >UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGC1_9EURY Length = 172 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 66/140 (47%), Positives = 98/140 (70%), Gaps = 1/140 (0%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 +N ++NWGR NS+WP FG SCC +EM+T D R G SPRQ+DL++V+GT Sbjct: 24 INTVLNWGRSNSLWPLTFGTSCCAIEMMTFGATKVDADRLGVLFNGDSPRQSDLILVSGT 83 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 KMA + +Y+Q+ +PK+VI++GAC SGG+Y D Y+ ++G+D+ +PVD +IPGCPP Sbjct: 84 ITKKMARRLLNVYEQIPDPKYVIAVGACNVSGGLYHDSYNTIEGIDRIMPVDAFIPGCPP 143 Query: 161 RPEAYMQALMLLQESIGKER 180 RPE ++ A+ +LQ+ I + R Sbjct: 144 RPEEFLDAVRVLQKLIKENR 163 >UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI98_9EURY Length = 206 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 65/136 (47%), Positives = 91/136 (66%), Gaps = 1/136 (0%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 N +V W R NS+WP FGL+CC +E++ A D R G + R +PRQ D+M+VAG Sbjct: 48 NGVVKWSRSNSMWPMLFGLACCAIELMDFGAARIDAERKGYLLFRGTPRQCDVMIVAGWV 107 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGG-MYDIYSVVQGVDKFIPVDVYIPGCPPR 161 M P ++RLY+QM PK+V++ G CA +GG Y+ Y++V+G+D+ +PVDVY GCPP+ Sbjct: 108 TKSMVPRVKRLYEQMASPKYVVAYGECATAGGPWYESYNIVKGIDQVLPVDVYAIGCPPK 167 Query: 162 PEAYMQALMLLQESIG 177 PE ALM LQE +G Sbjct: 168 PENLFAALMKLQEKVG 183 >UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=7 Tax=Trypanosomatidae RepID=NDUS7_TRYBB Length = 202 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 66/136 (48%), Positives = 96/136 (70%), Gaps = 2/136 (1%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 L+D+ W S WP FGL+CC VEM+ ++ + +D+ RFG V R +PRQA++++V+GT Sbjct: 56 LHDLTEWCLAYSPWPLTFGLACCAVEMMHAYASRYDLDRFGI-VPRPTPRQAEIIIVSGT 114 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPP 160 KMAP+++ +Y QM+ PKWVISMG+CAN GG Y Y+V++G ++ IPVD +IPGCPP Sbjct: 115 VTNKMAPILRNIYVQMVNPKWVISMGSCANGGGYYHFSYAVLRGCERAIPVDFWIPGCPP 174 Query: 161 RPEAYMQALMLLQESI 176 E+ + L LQ+ I Sbjct: 175 SAESLVFCLHTLQKKI 190 >UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC56_9ZZZZ Length = 182 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/188 (43%), Positives = 114/188 (60%), Gaps = 14/188 (7%) Query: 1 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG 60 M+ ++ I P+G Q+IV D + + K + KL + WGRKNS+W + Sbjct: 1 MESSMKNILPDGTKTIV----QDIV-DGVNVAIKKVPLVKKL---ITWGRKNSLWVVHLT 52 Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP 120 CC E A +D+ RFG V+ A+ RQ D++++ G KMA V++R YDQM +P Sbjct: 53 TGCCSPEFAALAGAGYDMERFGPLVM-AAMRQCDILIIEGQVADKMAEVVKRTYDQMPDP 111 Query: 121 KWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 K+VI++G CA SGG Y D YS+V G+DK IPVDVY+PGCPPRPE ++ A+ L+Q + KE Sbjct: 112 KYVIAVGNCAISGGFYWDSYSMVMGIDKIIPVDVYVPGCPPRPEDWIDAIRLVQTRMDKE 171 Query: 180 ----RRPL 183 RPL Sbjct: 172 GLDRERPL 179 >UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q6C2Q1_YARLI Length = 216 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 4/127 (3%) Query: 28 PLEQEVNKNV--FMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 P +Q+ N V + L+ + NW R+ S WP FGL+CC VEM+ +D R G + Sbjct: 48 PSQQKPNSAVDYTLTTLDAVANWARQGSFWPVTFGLACCAVEMMHVSAPRYDQDRLGI-I 106 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQG 144 RASPRQ+D+M+VAGT KMAPV++++YDQM EP+WVISMG+CAN GG Y YSVV+G Sbjct: 107 FRASPRQSDIMIVAGTLTNKMAPVLRQVYDQMPEPRWVISMGSCANGGGYYHFSYSVVRG 166 Query: 145 VDKFIPV 151 D+ +PV Sbjct: 167 CDRIVPV 173 >UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=Selaginella uncinata RepID=Q2WGH7_SELUN Length = 215 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/139 (47%), Positives = 85/139 (61%), Gaps = 3/139 (2%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 ND N R S P +G SCC+ E + D R G+ V R+SPRQADL++ AGT Sbjct: 48 NDFTNRARLPSSRPPPYGTSCCFTEFAPLIGSRSDSDRHGS-VPRSSPRQADLIITAGTA 106 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVDKFIPVDVYIPGCPP 160 TKMAP + R Y+Q EPK I+MGAC +GGM D +S V+GVDK IP D Y PG PP Sbjct: 107 TTKMAPSLVRSYEQTPEPKHAIAMGACTVTGGMLSTDPHSTVRGVDKSIPADTYPPGRPP 166 Query: 161 RPEAYMQALMLLQESIGKE 179 +PEA + A + +E + +E Sbjct: 167 KPEAIVDATIKPREKVSRE 185 >UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japonica Group RepID=C7IWD0_ORYSJ Length = 379 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/98 (62%), Positives = 75/98 (76%), Gaps = 3/98 (3%) Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D R+G V R+SPRQADL++ AGT KMAP + RLY+QM EPK+VI+MGAC +GGM+ Sbjct: 154 DFDRYGL-VPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMF 212 Query: 137 --DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 D YS V+GVDK IPVDVY+PGCPP+PEA + AL L Sbjct: 213 STDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKL 250 >UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R6_MAGSM Length = 213 Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 2/149 (1%) Query: 33 VNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQ 92 V ++ + D+ NW R NSIW FG C +EM T D R+G + RA+PRQ Sbjct: 34 VQTGEYLQIVEDLFNWARSNSIWVLGFGTGCGAIEMRPLMTPRFDAYRYGVQ-WRATPRQ 92 Query: 93 ADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPV 151 ++L +V+G K + R Y+QM PK+V+ +G+C +GGMY D Y+ ++ +D ++PV Sbjct: 93 SNLFIVSGYLSVKTLKRVVRAYEQMQSPKYVMGLGSCTINGGMYWDSYNTIKQLDDYLPV 152 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKER 180 D+Y+ GC PRPEA + + L++ I + R Sbjct: 153 DLYVTGCMPRPEALLSGIEALKKIIREGR 181 >UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=Thermoprotei RepID=A1RZ48_THEPD Length = 171 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 3/138 (2%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + + +W S+WP +F SCC E + D RFG SPRQ +LMV+ GT Sbjct: 30 IRSLRDWAITFSLWPVHFTTSCCGAEFAATSAPRFDAERFGFLPFN-SPRQTNLMVIEGT 88 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPP 160 KM + +YDQM PK+VI+MGACA GG+ Y+ Y++V+ D +PV+ +IPGCPP Sbjct: 89 LTKKMGEAAKIVYDQMPWPKFVIAMGACAIDGGLFYNSYNIVRPKD-ILPVEYFIPGCPP 147 Query: 161 RPEAYMQALMLLQESIGK 178 RPEA QA+++LQE + K Sbjct: 148 RPEAVAQAIIMLQEKVRK 165 >UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Epsilonproteobacteria RepID=B9L626_NAUPA Length = 157 Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/141 (39%), Positives = 87/141 (61%), Gaps = 2/141 (1%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 M K+ D N+ R S W +F CC +EM+ + +D R+G ++ +PRQAD+M + Sbjct: 1 MLKVLDFFNYARSKSPWIVHFCSGCCSLEMLAAMGPRYDWERYGY-IMTPTPRQADIMFI 59 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPG 157 G K+ P + R Y+QM EP++V+++GACA GG Y D SV++ + + +P DV++ G Sbjct: 60 TGLVSKKILPALLRTYEQMPEPRYVVAIGACAYDGGPYNDSVSVIKNMTEILPADVFVAG 119 Query: 158 CPPRPEAYMQALMLLQESIGK 178 CPPRPEA + L L+E I + Sbjct: 120 CPPRPEAIIAGLEELKEKIKR 140 >UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN9_HALUD Length = 183 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 8/147 (5%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGL-SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 MG++ ++W R S W + SC C +E + + +DV RFG + + +PR AD+ Sbjct: 1 MGRI---IDWARNRSPWILHMNCGSCNGCDIETLDALMPRYDVERFGIQ-QKDTPRHADV 56 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVY 154 +V G +MAP ++R+Y+QM EPK VI+ G+CA +GG++ D Y+ +G+D IPVD+Y Sbjct: 57 LVATGPVTKQMAPRLERIYEQMPEPKLVIAAGSCAATGGVFQDCYNCHEGIDDVIPVDMY 116 Query: 155 IPGCPPRPEAYMQALMLLQESIGKERR 181 +PGCP PE + ++ L E G+E + Sbjct: 117 VPGCPISPETLIDGIVALLEEAGQEAK 143 >UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=cellular organisms RepID=A3DKH2_STAMF Length = 165 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 5/122 (4%) Query: 55 WPYNFGLSCCY---VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQ 111 W +F C +E++ + T ++D RFG + L S R AD++VV G K A ++ Sbjct: 32 WLIHFNTGACNGCDIEVLAAITPLYDPERFGIK-LAPSIRHADILVVTGAVTKKAAERLK 90 Query: 112 RLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALM 170 RLY+QM +PK+V+++GACA SGG++ + YSV+ G DK IPVD+Y+PGCPPRPEA + ++ Sbjct: 91 RLYEQMPDPKFVVAVGACAISGGVFHNSYSVLAGTDKVIPVDIYVPGCPPRPEAILDGIV 150 Query: 171 LL 172 L Sbjct: 151 KL 152 >UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=Thermoprotei RepID=A2BJ94_HYPBU Length = 209 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 3/138 (2%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + +++WG S+WP + SCC E + +D R G+ PR ++++V GT Sbjct: 33 IKSLLDWGISFSLWPVHLTTSCCGAEFAAVYDPKYDSERLGSLPF-THPRNTNVLLVEGT 91 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPP 160 KMA + +++QM PK+VI+MGACA +GG+ Y+ Y++V+ V++ +PVD Y+PGCPP Sbjct: 92 LTRKMARAARLVWEQMPWPKFVIAMGACAITGGIFYNSYNIVR-VNQILPVDYYVPGCPP 150 Query: 161 RPEAYMQALMLLQESIGK 178 PEA AL+ LQE + K Sbjct: 151 TPEAVANALIKLQEKVRK 168 >UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea RepID=B1L7S0_KORCO Length = 174 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 85/138 (61%), Gaps = 3/138 (2%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + D+ +WG S+WP +F +CC E S +D R G RQ +++ + GT Sbjct: 31 IRDIRDWGIAFSLWPVHFTTACCGAEFAASAAPKYDAERLGFLPF-IGIRQCNVLFIEGT 89 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 KMA +Y+QM EPK+VI MGACA GG++ + Y++V+ +D +PV+V+IPGCPP Sbjct: 90 LSKKMAEAAIWVYEQMPEPKFVIGMGACAIDGGIFWNSYNIVRPMD-ILPVNVFIPGCPP 148 Query: 161 RPEAYMQALMLLQESIGK 178 RPEA QA+++LQ I K Sbjct: 149 RPEAVAQAIIMLQRKIRK 166 >UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1E3_DESDA Length = 185 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 103/172 (59%), Gaps = 10/172 (5%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGL-SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 MG ++ M+ R S W +F SC C +E++ T ++DV RFG V +P+ AD+ Sbjct: 1 MGFVDKMIKRSRLKSPWIVHFDCGSCNGCDIEVLACLTPMYDVERFGV-VNAGNPKHADV 59 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVY 154 ++V GT + V++++Y+QM PK VIS+GAC SGG++ D Y+V+ G IPVDV+ Sbjct: 60 LLVTGTVNHRNRHVLKQIYEQMPSPKAVISLGACNLSGGVFKDTYNVLNGAHNVIPVDVF 119 Query: 155 IPGCPPRPEAYM----QALMLLQESIGKERRP-LSWVVGDQGVYRANMQSER 201 +PGCPP+PEA + +AL +L+ +G P +++ GD+ A + E Sbjct: 120 VPGCPPKPEAIIDGVVEALGVLKAKMGMGPVPQATFMPGDEDGTPAGARDEE 171 >UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=Thermoproteaceae RepID=A8MBS9_CALMQ Length = 374 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 91/142 (64%), Gaps = 4/142 (2%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 + + +WG K SIWP + +CC VE + +D R+G + PRQ + +V+ GT Sbjct: 25 DSLASWGTKFSIWPAHLVTACCGVEFAHASAPGYDAERWGFLPIFG-PRQTNSIVIEGTV 83 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPR 161 KMA +++ Y+QM PK+VI+MG+CA GG++ + Y VV+ V++ +PVD ++ GCPP Sbjct: 84 TRKMARIVKTAYEQMPYPKFVIAMGSCAMEGGVFWNSYHVVR-VNEIVPVDAWVMGCPPT 142 Query: 162 PEAYMQALMLLQESI-GKERRP 182 PEA ++A+ ++Q I GKE +P Sbjct: 143 PEAVIRAIRMVQSKIEGKEVKP 164 >UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=cellular organisms RepID=A9KS72_CLOPH Length = 144 Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 89/132 (67%), Gaps = 9/132 (6%) Query: 51 KNSIWPYNF-GLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S W ++ G SC C +E++ T ++DV RFG + +P+ AD++++ G+ + Sbjct: 5 KKSPWIIHYDGSSCNGCDIEVLACLTPLYDVERFGI-INTGNPKHADILLITGSVNEQNI 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 PV++++Y+QM EPK V+++G CANSGG++ + Y+V GVDK +PVDVY+PGC RPEA + Sbjct: 64 PVVKQIYEQMAEPKIVVAVGICANSGGIFAECYNVSGGVDKVLPVDVYVPGCAARPEAII 123 Query: 167 ----QALMLLQE 174 + L +L+E Sbjct: 124 DGVVKGLAILEE 135 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/127 (45%), Positives = 83/127 (65%), Gaps = 5/127 (3%) Query: 48 WGRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTK 105 +GR +I + G SC C VE+ + A++D+ RFG ++ ASPR AD ++V G Sbjct: 113 FGRSLAIREVDAG-SCNGCEVEVNSLSNAIYDIERFGLHIV-ASPRHADALLVTGPVTRN 170 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 M + + Y+ +PK VI+MGACA +GG++ D Y+V GVD +PVDVYIPGCPPRP+A Sbjct: 171 MERGLMQSYNATPDPKMVIAMGACAITGGIFRDSYAVYNGVDALVPVDVYIPGCPPRPQA 230 Query: 165 YMQALML 171 +Q +ML Sbjct: 231 IIQGIML 237 >UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteobacteria RepID=B9L8U0_NAUPA Length = 164 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 81/125 (64%), Gaps = 5/125 (4%) Query: 50 RKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 RK S W ++ G + C +E++ + +D+ RFG + R +P+Q+D+++V G + Sbjct: 8 RKKSPWILHYNTGGCNGCDIEILAALAPKYDIERFGM-LNRGNPKQSDILLVTGPVTKRC 66 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 V++RLY +M EPK V++MGACA+ GG++ D Y V GVD IPVDV+IPGC PR EA Sbjct: 67 RDVLRRLYLEMPEPKVVVAMGACAHGGGIFRDFYHVENGVDNIIPVDVWIPGCAPRVEAV 126 Query: 166 MQALM 170 + ++ Sbjct: 127 IDGMV 131 >UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=Staphylothermus marinus F1 RepID=A3DM92_STAMF Length = 179 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/135 (40%), Positives = 82/135 (60%), Gaps = 2/135 (1%) Query: 47 NWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 W R SIW ++ +C +E+ + A D R+G + SPRQAD++V+ G K Sbjct: 13 EWVRSRSIWMIHYCSACGAIELPPNMMAPLDAERWGI-MPAPSPRQADVLVIMGYVTKKT 71 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 V+ RLY QM EP++V+ C +GG+Y D YS V+ VD+F+PVDV++PGC PR E + Sbjct: 72 LKVLMRLYHQMPEPRYVMVGCNCPATGGLYWDSYSTVKAVDEFLPVDVWVPGCMPRAEDW 131 Query: 166 MQALMLLQESIGKER 180 +Q + L++ I + R Sbjct: 132 LQGFLKLRKKISEGR 146 >UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBM2_9ACTN Length = 195 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 5/122 (4%) Query: 53 SIWPYNF-GLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPV 109 S W ++ G SC C +E++ S T + D RFG V +P+ AD+ +V G+ + PV Sbjct: 8 SPWVIHYDGSSCNGCDIEVLASLTPLFDAERFGV-VNTGNPKHADIFLVTGSVNAQNLPV 66 Query: 110 IQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQA 168 ++++Y+QMLEPK V++ G CA SGG++ D Y+V+ GVD+ IPVDVY PGC RPE + A Sbjct: 67 VRQIYNQMLEPKCVVACGICACSGGVFRDAYNVIGGVDRAIPVDVYAPGCAIRPETVIDA 126 Query: 169 LM 170 ++ Sbjct: 127 IV 128 >UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X3_IGNH4 Length = 207 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 92/157 (58%), Gaps = 15/157 (9%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + + + W R+NS+W + G+ CC +EM+ + A HD R G + RA+PRQ D++++ G Sbjct: 20 VKEALKWSRRNSLWLLHLGIMCCAIEMMQAAFAFHDFERLGV-LARATPRQVDVILINGP 78 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGG--------MYDIYSVVQGVDKFIPVDV 153 K+A ++RL+ Q P++VI MG CA +GG + I+ V++ + + DV Sbjct: 79 VNRKLAERLRRLFMQTPGPRFVIVMGECAINGGPWWQSDYVLDGIHEVIESLPEEYRKDV 138 Query: 154 YI---PGCPPRPEAYMQALMLLQESIGK---ERRPLS 184 ++ GCPPRPE ++A++ ++E I + R PL+ Sbjct: 139 HVVNLAGCPPRPEGLLRAILKMEELINEGDLARAPLT 175 >UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 Length = 274 Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 19/184 (10%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 N KL + N R S++ + G SC C +E+ + T + D RFG +++ A+PR A Sbjct: 14 NDLTAKLEHLKNIKRSFSVYRIDCG-SCNGCEIEIFAAITPMWDPERFGFKLV-ANPRHA 71 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVD 152 D+++ +G +M + R Y+ +PK V++ GAC +SGG++ D YSV G+DK IPVD Sbjct: 72 DILICSGPVTRQMYYPLLRAYEAAPDPKIVVAFGACGSSGGIFHDAYSVWGGIDKIIPVD 131 Query: 153 VYIPGCPPRPEAYMQALMLLQESIGKERRPLSW-------------VVGDQGVYRANMQS 199 VYIPGCPP P + + L + I ++ S+ V+GD ++ ++Q+ Sbjct: 132 VYIPGCPPHPASVIYGLGMALGIIDQKLHKKSYEDDSTLPPPVEKSVIGDI-LFERDLQA 190 Query: 200 ERER 203 E +R Sbjct: 191 ESKR 194 >UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=cellular organisms RepID=A9BJL8_PETMO Length = 195 Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 9/151 (5%) Query: 36 NVFMGKLNDMV-------NWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 N+F LND + N R S+W ++ C VE+ + TA D+ R G + A Sbjct: 11 NIFEEDLNDTITFWEKIKNIFRGKSLWMLHYCTGCGAVELPPTMTARFDMERLGMGPM-A 69 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 +PRQAD++++ G K + Y+QM+ PK+++ G+C +GG+Y D Y+V+ +D Sbjct: 70 TPRQADVLLITGYLSVKTLRRVIYTYEQMMTPKYLVGFGSCTINGGIYYDSYAVINRLDY 129 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 ++PVD+Y+ GC PRPEA M L+ I K Sbjct: 130 YLPVDLYVAGCMPRPEAIMNTFKTLENMITK 160 >UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA3_9ACTN Length = 228 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/134 (39%), Positives = 85/134 (63%), Gaps = 5/134 (3%) Query: 52 NSIWPYNF-GLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 S W ++ G SC C +E++ S ++D+ RFG + +P+ AD+ +V G+ + Sbjct: 6 KSPWLIHYDGSSCNGCDIEVLDSMMPLYDIERFGI-INTGNPKHADIFLVTGSVNAQNIE 64 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 V++ +YDQMLEPK V++ G CA +GG++ D Y+V+ GVDK IPVDVY PGC RPE + Sbjct: 65 VVRHIYDQMLEPKVVVACGICACTGGVFRDCYNVIGGVDKAIPVDVYAPGCAVRPETIID 124 Query: 168 ALMLLQESIGKERR 181 A++ E + ++ + Sbjct: 125 AVLKAVEILDEKAK 138 >UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (MbxJ) n=11 Tax=cellular organisms RepID=C5A4Q2_THEGJ Length = 194 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 2/133 (1%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 + W RK S+W F C +EM TA +D RFG + +PR ADL ++ G Sbjct: 21 LFRWARKKSLWIVAFCTGCGGIEMPPLATARYDFERFGI-MPNPAPRMADLFLITGYVTP 79 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 K I Y+ M +PK+V++ G+C +GG+Y D Y+VV+ +DK+IP+DV I GC PRPE Sbjct: 80 KTLKRIIITYEMMQDPKYVLAHGSCPINGGVYWDSYNVVKQLDKYIPIDVAIAGCMPRPE 139 Query: 164 AYMQALMLLQESI 176 A M +M + I Sbjct: 140 AVMDGIMEIMRKI 152 >UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=54 Tax=cellular organisms RepID=B2A054_OPITP Length = 338 Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 81/134 (60%), Gaps = 9/134 (6%) Query: 48 WGRKNSIWPYNFGLSCCY---VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 G + S W ++ S C +E + T ++DV R G + +P+ AD+ +V G Sbjct: 2 LGLRKSPWIIHYDASSCNGCDIETLACLTPLYDVERLGV-INTGNPKHADIFLVTGAVNE 60 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 + VI+ +Y Q+ EPK V+++G CA+SGG++ D Y++ GVD+ IPVDVY+PGC RPE Sbjct: 61 QSKEVIRNIYHQLPEPKVVVAIGVCASSGGIFRDCYNIAGGVDRVIPVDVYVPGCAARPE 120 Query: 164 AYM----QALMLLQ 173 A + QAL +L+ Sbjct: 121 AIIDGVVQALGVLE 134 >UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=Thermoproteaceae RepID=A4WJL4_PYRAR Length = 196 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 86/144 (59%), Gaps = 1/144 (0%) Query: 40 GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 KL + NWG + S+WP + SCC VE+ + D R+G RQ+++++V Sbjct: 20 AKLEKIFNWGVRWSLWPVHLVTSCCGVEVAHTSGPGFDAERWGVLPFHTM-RQSNVILVE 78 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCP 159 GT KMA V++ +Y+QM EPK+V++MGACA GG++ V VD +PVDVYI GCP Sbjct: 79 GTITRKMAKVLKMVYEQMPEPKFVLAMGACAVRGGLFWNSYHVVQVDTVVPVDVYIAGCP 138 Query: 160 PRPEAYMQALMLLQESIGKERRPL 183 P PEA ++A ++L I + P Sbjct: 139 PTPEAVVRAFIMLHNKIKGKPGPF 162 >UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID=B6IT61_RHOCS Length = 196 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 84/139 (60%), Gaps = 8/139 (5%) Query: 49 GRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 GR +I + G SC C +E+ V+D+ RFG + ASPR AD+++V G T M Sbjct: 42 GRSLAIRQVDAG-SCNACEMEIHALNNPVYDLERFGFSFV-ASPRHADVLLVTGPVTTNM 99 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 + + ++ +PKWV+++G CA GG + D Y+VV GV+K +PVD+ IPGCPPRP Sbjct: 100 REALLKTWEATPDPKWVVALGQCAIDGGPFADSYAVVGGVEKVVPVDLMIPGCPPRPVDI 159 Query: 166 MQALMLLQESIGKERRPLS 184 + AL+ L E+ E RP S Sbjct: 160 LAALVALIEA---EARPPS 175 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 88/151 (58%), Gaps = 6/151 (3%) Query: 30 EQEVNKNVFM---GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL 86 E E ++N+ + G + W K S+WP +F SCC VE+ + +D+ R G + Sbjct: 3 ETEKDRNIRILHSGVFTPLRRWATKWSLWPCHFLTSCCGVELAHTGACGYDMERLGTLNM 62 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGV 145 S RQA+ ++V GT KMA ++ +++QM +PK+V +G C GG++ + Y++ + Sbjct: 63 GIS-RQANFIMVEGTITRKMARALRIVWEQMPDPKFVNVIGTCGQRGGIFWNSYNITRPS 121 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 D +PVD +IPGCP PE+ ++ + +QE I Sbjct: 122 D-IVPVDFFIPGCPITPESLLRGVRAVQEKI 151 >UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=cellular organisms RepID=A1ASR2_PELPD Length = 179 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 5/137 (3%) Query: 53 SIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPV 109 S+W Y+ G + C +E++ T +DV RFG + L SPR AD+M+ G Sbjct: 13 SLWVYHANSGGCNGCDIEVLNVLTPYYDVERFGIK-LVGSPRHADVMLCQGPAMRSTGKA 71 Query: 110 IQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQA 168 +QR Y M PK V ++G+CA GG+ +D Y+V V+K IPV+ Y+PGCPPRPEA + Sbjct: 72 LQRAYAAMPGPKLVFAIGSCACGGGIWHDSYAVHGPVEKLIPVNYYVPGCPPRPEAIIWG 131 Query: 169 LMLLQESIGKERRPLSW 185 + + + K+ P+ + Sbjct: 132 VAVAAGLVDKKTAPVEF 148 >UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacteria RepID=HYCG_ECOLI Length = 255 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 13/157 (8%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + C +E+ + + + D RFG +V+ SPR AD+++ G M R + + Sbjct: 47 GCNGCEIEIFATLSPLFDAERFGIKVV-PSPRHADILLFTGAVTRAMRSPALRAWQSAPD 105 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEA----YMQALMLLQE 174 PK IS GAC NSGG++ D+Y V G DK +PVDVYIPGCPP P A + AL LL++ Sbjct: 106 PKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQ 165 Query: 175 SIGK------ERRPLSWVVGDQGVYRANMQSERERKR 205 I + +P + GD V ++ +RE +R Sbjct: 166 KIHARGPGELDEQPAEILHGDM-VQPLRVKVDREARR 201 >UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T1_UNCMA Length = 135 Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 7/126 (5%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S W Y+ G C +E+V S +D+ R G L SPR AD+++V G Sbjct: 5 KRSPWVYHAHAGGCVGCDIELVASMGPRYDLERLGVR-LVPSPRYADVLLVTGPVPLHTK 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY---DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 P ++R+Y Q EPK VI++GAC S G++ + YS+ VDK IPVDV IPGCPP+PEA Sbjct: 64 PFLERVYAQTPEPKRVIAIGACGCSCGVFIDDENYSIAGPVDKIIPVDVKIPGCPPKPEA 123 Query: 165 YMQALM 170 M+ ++ Sbjct: 124 IMEGII 129 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 10/150 (6%) Query: 29 LEQEVNKN---VFMGKLNDMV--NWGRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARF 81 +++E+N + KLN+ V +GR +I + G SC C E+ +D+ RF Sbjct: 113 IDEEINGTDYELIGKKLNEKVAKKFGRSLNIREVDAG-SCNGCDYEIQALNGPYNDIERF 171 Query: 82 GAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYS 140 G + ASPR AD+++V G M + + Y+ PK V++ GACA SGG++ D Y+ Sbjct: 172 GIHFV-ASPRHADMLLVTGCVSRNMEEALVKTYNATPSPKLVVAAGACACSGGLFKDSYA 230 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALM 170 G+D +PVDVYIPGCPPRP+A + ++ Sbjct: 231 GRNGIDTILPVDVYIPGCPPRPQALIYGIL 260 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 74/126 (58%), Gaps = 5/126 (3%) Query: 49 GRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 GR I + G SC C VE+ ++D+ RFG ++ ASPR AD+++V G M Sbjct: 148 GRSLHIREVDAG-SCNGCEVEINALSGPIYDLERFGIHLV-ASPRHADMLLVTGPVTRNM 205 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAY 165 +++ YD EP+ V+++GAC SGGM+ Y+ VD +PVDVYIPGCPP P A Sbjct: 206 ELALRKTYDATPEPRLVVAVGACGCSGGMFGRNYATCGSVDSVLPVDVYIPGCPPNPFAL 265 Query: 166 MQALML 171 + ++L Sbjct: 266 LHGILL 271 >UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bacteria RepID=C7MLM8_CRYCD Length = 283 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 23/179 (12%) Query: 42 LNDMVNWGRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 LND+ K S++ Y G + C +E+ + T V D RFG + + ASPR AD++V Sbjct: 52 LNDI-----KRSVYIYRVDCGGCNGCEIEIFGTLTPVFDAERFGIKNM-ASPRHADILVY 105 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPG 157 G M R Y+ +PK ++S GAC +GG++ D Y V G DK PVDVYIPG Sbjct: 106 TGAVTRAMRLPALRAYEAAPDPKLIVSYGACGCTGGIFHDNYCVWGGTDKLFPVDVYIPG 165 Query: 158 CPPRPE----AYMQALMLLQESIGKERRPLSWVVGDQG-------VYRANMQSERERKR 205 CPP P + AL LL + + + L G+Q Y+ + ERE +R Sbjct: 166 CPPSPAQTIYGFAMALGLLGQKL--HEKHLVEGEGEQAPIMFADIPYKLRCELEREARR 222 >UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarchaeota RepID=Y516_METJA Length = 148 Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 71/111 (63%), Gaps = 1/111 (0%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + C +E+V +D+ ++G V +PR+AD+++V G + A ++ +Y++ E Sbjct: 20 GCNGCDIEIVACLAPRYDIEQYGIYV-HNNPREADVLLVTGPVTLQWAERLKEIYEKTPE 78 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALM 170 PK V+++GACA SGG++ VV GVDK IPVD IPGCPPRP ++ ++ Sbjct: 79 PKIVVAVGACALSGGIFKEGHVVGGVDKVIPVDAKIPGCPPRPSEIIETIL 129 >UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN Length = 214 Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 3/149 (2%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + KL+D+VNW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQ+D+M+V Sbjct: 64 VAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQSDVMIV 122 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISM-GACANSGGMYDIYSV-VQGVDKFIPVDVYIP 156 AGT KMAP +++ + + + G G + ++ + +G+ P Sbjct: 123 AGTLTNKMAPALRKSPPRPDAGAALRGLHGELRQRGRLLPLFLLGGEGLRPHRARGHLHP 182 Query: 157 GCPPRPEAYMQALMLLQESIGKERRPLSW 185 P EA + ++ LQ I +ERR W Sbjct: 183 RLPTTAEALLYGILQLQRKIKRERRLQIW 211 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + C ++ T V+D++RFG + + ASPR AD +V+ G M + + YD Sbjct: 132 GCNACDADINVLNTPVYDLSRFGIKFV-ASPRHADGLVITGPVTKNMELALMKTYDATPS 190 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALM 170 PK+VI++G CA SGG++ + VV GVDK +PVD+YIPGCPP P + A + Sbjct: 191 PKFVIAVGTCAISGGIFRENEEVVGGVDKILPVDLYIPGCPPHPFTNLYAFV 242 >UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxidoreductase Fe-S protein 7 n=1 Tax=Taeniopygia guttata RepID=UPI000194DF39 Length = 183 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 39/147 (26%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + KL+D+VNW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQAD+M+V Sbjct: 73 IAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQADVMIV 131 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGC 158 AGT KMAP +++ +P C C Sbjct: 132 AGTLTNKMAPALRK------KPP-------CRGR-------------------------C 153 Query: 159 PPRPEAYMQALMLLQESIGKERRPLSW 185 PP EA + ++ LQ I +E+R W Sbjct: 154 PPTAEALLYGILQLQRKIKREKRMQIW 180 >UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, putative n=1 Tax=Ricinus communis RepID=B9SD17_RICCO Length = 188 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 2/76 (2%) Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 MAP + RLY+Q+ EPK+VI+MGAC +GGM+ D YS ++GVDK IPVD Y+ GCPP+PE Sbjct: 1 MAPSLVRLYEQIPEPKYVIAMGACTITGGMFSTDSYSTIRGVDKLIPVDAYLSGCPPKPE 60 Query: 164 AYMQALMLLQESIGKE 179 A + A+ L++ + +E Sbjct: 61 AVIDAITKLRKKLSRE 76 >UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase small subunit n=13 Tax=cellular organisms RepID=B6YU96_THEON Length = 175 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 5/133 (3%) Query: 49 GRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 GR ++ N G SC C +E++ + T +D RFG + L SPR AD+++V G + Sbjct: 34 GRSPWVFHVNSG-SCNGCDIEIIAALTPRYDAERFGVK-LVGSPRHADVLLVTGPVTDQS 91 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 ++ +Y+Q +PK VI++G+C G + Y+ + IPVDVY+PGCPPRPEA Sbjct: 92 LERVKLVYEQTPDPKIVIAVGSCPTGGSVFYESPFTNAPLSNIIPVDVYVPGCPPRPEAI 151 Query: 166 MQALMLLQESIGK 178 + ++L E + K Sbjct: 152 LYGVVLALEKLAK 164 >UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=cellular organisms RepID=A7I7C9_METB6 Length = 172 Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 3/133 (2%) Query: 48 WGRKNSIWPYNFGL-SCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +GR +I + G + +E+ A +DV RFG + ASPR AD+++V G M Sbjct: 39 FGRSLAIRELDAGSDNAAEIEINNLSNAYYDVERFGISFV-ASPRHADVLLVTGAITCNM 97 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 A Q+ YD M PK+V+++G A GG+Y Y+V+ G D PVD+ IPG PP P Sbjct: 98 AIAAQKTYDAMPSPKFVVAVGDDACDGGIYKGTYAVLGGADAIFPVDLKIPGNPPAPIQI 157 Query: 166 MQALMLLQESIGK 178 + L+ L S GK Sbjct: 158 LTGLLALMRSAGK 170 >UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit n=4 Tax=Archaea RepID=B6YWP9_THEON Length = 191 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 21/175 (12%) Query: 51 KNSIWPYNFGL-SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 KNS+W ++ SC C +E++ F +DV R G + L SPR AD + G + Sbjct: 3 KNSLWVFHLNSGSCNGCDIEILNIFAPRNDVERLGIK-LVGSPRHADAIAFTGPITRECL 61 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFI-----------PVDVYI 155 P + + EPK V+++GACA GG+ YD YSV+ GV + P V+I Sbjct: 62 PKVIDALKAVPEPKVVLAIGACACGGGIWYDTYSVIGGVKELYRILKEEYNMEPPATVFI 121 Query: 156 PGCPPRPEAYMQALMLLQESIGKERRPLSWV-----VGDQGVYRANMQSERERKR 205 PGCPP+PEA + + + + +++ +V V ++ + A + SE E+ R Sbjct: 122 PGCPPKPEAIIYGVAVASGMLESKQKKTVYVEPEESVANEKLMIAELISETEKTR 176 >UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H7B9_CHAGB Length = 189 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 44/143 (30%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + L+ ++NW R+ S+WP +FGL+CC +EM+ +D R G + RASPRQ+D+M+V Sbjct: 83 LSTLDGLINWARQGSLWPMSFGLACCAIEMMHLSMPRYDNDRQGI-IFRASPRQSDVMIV 141 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGC 158 AG GVD+ +PVD+Y+PGC Sbjct: 142 AG-------------------------------------------GVDRIVPVDIYVPGC 158 Query: 159 PPRPEAYMQALMLLQESIGKERR 181 PP EA + LQ+ + +R Sbjct: 159 PPTAEALQYGIFQLQKKMAAGQR 181 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 73/117 (62%), Gaps = 2/117 (1%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWV 123 C +E+ + +D++R+G + ASPR AD +VV G M + + YD + +PK V Sbjct: 127 CMMEVSNTQNTYYDLSRYGIK-FAASPRHADGIVVTGPVTLNMKEALIKTYDAISDPKIV 185 Query: 124 ISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 I++G+CA SGG++ D YSV + +++ + V++ IPGCPP P+A + ++ + + +E Sbjct: 186 IAVGSCAYSGGIFKDGYSVCEDLNEILKVNLVIPGCPPSPQAILYGMLKIINKLDEE 242 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/137 (40%), Positives = 86/137 (62%), Gaps = 4/137 (2%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 + WG K S+WP + +CC VE+ ++ +D R G+ + RQ +L++V G Sbjct: 2 LKEWGTKWSLWPVHLVTACCGVELAHAYACGYDAERIGS-LNYGICRQTNLIIVEGAITR 60 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 KMA V++ ++QM PK+VI MGAC GG++ + Y +V+ D +PVDV++PGCPP PE Sbjct: 61 KMARVLRITWEQMPNPKFVIVMGACGIKGGLFKNSYHMVRPWDV-VPVDVFVPGCPPTPE 119 Query: 164 AYMQALMLLQESI-GKE 179 A ++ ++ LQ+ I GKE Sbjct: 120 ALIRGIVALQKKIEGKE 136 >UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W241_DESAS Length = 236 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 2/108 (1%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWV 123 C E+ + V+D+ ++G + + ASPR AD+++V G + + + Y+ P V Sbjct: 124 CDFEINSMTNPVYDIQQYGVDFV-ASPRHADMLLVTGVVTRNLEIALHKTYEACPRPALV 182 Query: 124 ISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALM 170 +++GACA GG++ + Y+ GVDKF+PVDVY+PGCPP P ++ ++ Sbjct: 183 VAVGACACGGGVFKEAYASGGGVDKFLPVDVYVPGCPPTPAQIIKGIL 230 >UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=C5CEV5_KOSOT Length = 137 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 76/123 (61%), Gaps = 5/123 (4%) Query: 51 KNSIWPYNFGLS-C--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S+W ++ S C C +E++ T +D+ RFG + L S R AD+++V G K++ Sbjct: 9 KRSLWVFHVSASPCNNCDIEILDMLTPRYDLERFGIK-LVGSVRHADVLLVTGMGGCKVS 67 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 + R+Y+Q +P +VI++G C +G + + Y+ +D+F+PVD+YIPGCPP+PE + Sbjct: 68 ERVIRIYNQAPKPVFVIAVGTCPVAGATFKESYTRCGPLDRFVPVDLYIPGCPPKPETMI 127 Query: 167 QAL 169 L Sbjct: 128 AGL 130 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 2/118 (1%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + C + T D+ RFG + + ASPR AD + V G MA + Y+ + + Sbjct: 126 GCNACEADTNVLSTIGWDLGRFGIQFV-ASPRHADGLWVTGPVTEHMAKALLTTYEAIPD 184 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 PK V++ GACA +GG Y D V GVD +PVD+YIPGCPP P + L+ + I Sbjct: 185 PKIVVACGACAINGGPYIDTPQVCNGVDSIVPVDLYIPGCPPHPATILDGLLRILNKI 242 >UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=9 Tax=Bacteria RepID=B2IID4_BEII9 Length = 177 Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 6/128 (4%) Query: 49 GRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 GR +I + G SC C +E+ A +D+ RFG + ASPR AD+++V G M Sbjct: 40 GRSLAIREVDAG-SCNGCELEINALGNAFYDLERFGLRFV-ASPRHADVLLVTGPVTHNM 97 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ--GVDKFIPVDVYIPGCPPRPEA 164 + R YD PKWV++ G CA G++ Q GV I VD+YIPGCPP P Sbjct: 98 REALLRTYDATPNPKWVVAAGTCALGEGVFAESYACQKGGVSAVIAVDLYIPGCPPTPTD 157 Query: 165 YMQALMLL 172 ++ L+ L Sbjct: 158 LLKGLLAL 165 >UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY8_9DEIN Length = 290 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 9/149 (6%) Query: 66 VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVIS 125 E+ + HD++RFG V+ ASPR AD ++V G M + R Y EPK V++ Sbjct: 143 TEVALAGNPFHDMSRFGFSVV-ASPRHADALLVTGPVSQNMREALWRTYQATPEPKGVVA 201 Query: 126 MGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI------GK 178 +G A G ++ + +VV GVD+ +PVDVY+PG P RP + + L+LL G+ Sbjct: 202 VGNEAIGGEIFAESAAVVGGVDQVVPVDVYVPGSPARPASILHGLLLLSGQTQQVLVGGR 261 Query: 179 ERRPLSWVVGDQ-GVYRANMQSERERKRG 206 + VV + GV ++ ++ER + G Sbjct: 262 LHEERTQVVSSEAGVEASSRRAERGEEHG 290 >UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5A0_DESK1 Length = 337 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/144 (32%), Positives = 77/144 (53%), Gaps = 4/144 (2%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 L + W S+W ++ +C VE A D R+G + SPRQ+DL + G Sbjct: 2 LERIARWAYARSLWMIHYCSACGAVEFPPLVMAPLDWERYGY-MPTPSPRQSDLYIGMGY 60 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 K ++ +Y QM EPK V++ C ++GG Y D Y+ + +D FI V+ ++PGC P Sbjct: 61 LTKKTVKLVLNMYRQMPEPKLVLAGCNCTSTGGPYWDSYATYKRLDDFIEVEGWVPGCMP 120 Query: 161 RPEAYMQALMLLQESIGKERRPLS 184 P+ Y+ + +++ +GK RPL+ Sbjct: 121 MPDDYLSMIEYVRKDLGK--RPLN 142 >UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST9_DESHY Length = 155 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWV 123 C EM ++D+ RFG + + ASPR AD+++ G T + Y+ PK + Sbjct: 46 CDWEMSALLNPIYDLQRFGLDFV-ASPRHADILMCTGPMSTHLIQAALATYEGTPNPKRI 104 Query: 124 ISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 I++G CA GGM+ + Y+ GV + +PVD+ IPGCPP P+ ++ L+ L+ Sbjct: 105 IAVGDCALDGGMFKEAYAAHNGVGEALPVDIKIPGCPPSPDELLKVLLQLK 155 >UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobacteria RepID=C6ANV6_AGGAN Length = 258 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 7/128 (5%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + C +E+ ++ T V D RFG +V+ ASPR AD+++ G+ M R Y + Sbjct: 46 GCNGCEIEIFSTITPVFDAERFGIKVV-ASPRHADILLFTGSVTRAMRTPAMRAYQAAPD 104 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEA----YMQALMLLQE 174 PK I+ GAC GG++ D+Y V G D+ +PVDVYIPGCPP P A + AL LL + Sbjct: 105 PKICIAYGACGCGGGIFHDLYCVWGGSDQIVPVDVYIPGCPPTPAATIYGFAMALGLLDQ 164 Query: 175 SI-GKERR 181 + GK+ + Sbjct: 165 KLKGKQEK 172 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWV 123 C E+ +++ R G SPR ADL++V G M ++R ++ M P+WV Sbjct: 141 CESELQALNNPFYNLHRLGI-FFTPSPRFADLLLVTGPVTRAMLEPLRRTWEAMPAPRWV 199 Query: 124 ISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 ++ G CA SGG+ + G+++ +PVD+Y+PGCPP P A ++AL++ Sbjct: 200 MASGTCAVSGGIAPGGPCLSGLEEALPVDLYLPGCPPNPAAIIEALLMF 248 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 2/116 (1%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + C + T V D+ RFG + + ASPR AD +V+ G M Y+ E Sbjct: 140 GCNACEADCNVLGTLVFDLPRFGIDFV-ASPRHADGIVLTGPVSENMRLAAIDTYNATPE 198 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 P+ V+++GACA SGG++ D G+ +PVD+++PGCPP P + L++L+E Sbjct: 199 PRLVVAVGACAISGGLFRDAPQCNNGIADILPVDLFVPGCPPNPWTILDGLLMLRE 254 >UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL1_THEPD Length = 245 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 8/124 (6%) Query: 62 SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 SC C +E+ + T DV R G +++ SPR AD+++V G + PV++ Y+ + Sbjct: 26 SCNGCDIEVFDALTPYFDVERLGVKLV-LSPRMADVILVTGPVTRQFLPVLKATYEAAPK 84 Query: 120 PKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ----ALMLLQE 174 P V++ GACA GG+ YD Y GVDK IPVDVYIPGCPPRP A + AL +L++ Sbjct: 85 PCVVVACGACACGGGIWYDTYGTAGGVDKVIPVDVYIPGCPPRPHAILHGVAVALDILEQ 144 Query: 175 SIGK 178 + + Sbjct: 145 KVKR 148 >UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (Complex I-20kD) (CI-20kD) (PSST subunit). n=1 Tax=Gallus gallus RepID=UPI0000EC9F96 Length = 176 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 4/147 (2%) Query: 41 KLNDMVNWGRKNS-IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 KL+D++NW R+ + W F C M H+ + FG L A + + A Sbjct: 29 KLDDLINWARRRACFWTECF--HCVASNMGYLLWKSHERSSFGLIQLTAHMPMSTACLPA 86 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGC 158 ++P + E + +CAN GG Y YSVV+G D+ +PVD+Y+PGC Sbjct: 87 RPHENHLSPHLTSAAGLGPELCFTNIFCSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGC 146 Query: 159 PPRPEAYMQALMLLQESIGKERRPLSW 185 PP EA + ++ LQ+ I +ER+ W Sbjct: 147 PPTAEALLYGILQLQKKIKRERKLQIW 173 >UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Aquificales RepID=B2V8R1_SULSY Length = 173 Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Query: 62 SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 SC C E+ +D+ RFG + + ASP+ AD +++ G M + + Y+ + Sbjct: 53 SCNACEYEISALSNPYYDIERFGVKFV-ASPKHADAIMITGCLTRNMYEAVMKAYENVPN 111 Query: 120 PKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 PK++I++G CA GG + Y+V+ G+ +P+D++I GCPP P + L++L Sbjct: 112 PKFIIAVGDCALDGGTFKGSYAVMDGIKDKLPIDIWIKGCPPEPIDIISGLLIL 165 >UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarchaeota RepID=Y1363_METJA Length = 151 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 77/124 (62%), Gaps = 12/124 (9%) Query: 57 YNFGLSCCYVEMVTS-FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTK-MAPVIQRLY 114 Y G + C +E+V + F+ +D ++ L +PR+AD++VV G C TK +A ++++Y Sbjct: 20 YTGGCNACDIEVVNAIFSPFYDAEQYNV-FLTFNPREADILVVTG-CVTKVVAESLRKIY 77 Query: 115 DQMLEPKWVISMGACANSGGMY-----DIYS---VVQGVDKFIPVDVYIPGCPPRPEAYM 166 +++ EPK V+++GACA GG+Y D+ + V V+ IPVDV +PGC PRPE + Sbjct: 78 EKIPEPKAVVAVGACALMGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCAPRPEDII 137 Query: 167 QALM 170 ++ Sbjct: 138 AGIV 141 >UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 Tax=Ixodes scapularis RepID=B7QG38_IXOSC Length = 162 Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 32/48 (66%), Positives = 41/48 (85%), Gaps = 1/48 (2%) Query: 111 QRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPG 157 +++YDQMLEP+WVISMG+CAN GG Y YSVV+G D+ IPVD+Y+PG Sbjct: 78 RKVYDQMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPG 125 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 4/115 (3%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G S C +E+ D+ R+G +++ ASPR AD +V++G MA +Q +D + E Sbjct: 137 GCSGCEMEINALSNVNFDLGRYGIDIV-ASPRHADALVLSGPITRNMAQALQICWDAIPE 195 Query: 120 PKWVISMGACANSGGMYDIYSVV--QGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 PK VI++GACA SGG++ + Q +D F P +Y+PGCP P ++ +M L Sbjct: 196 PKLVIAVGACAISGGVFADSDALDRQFLDNFKPA-LYVPGCPAHPLTFISGIMDL 249 >UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU9_ACEP3 Length = 165 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 9/126 (7%) Query: 60 GLSCCYVEMVTSFTAVHDV--ARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQM 117 G C +E+ A +D+ A FG SPR AD++++ G MAPV++ + M Sbjct: 37 GCGGCGMELQALRYAPYDMEGAGFG---FVTSPRNADVLLITGALTRAMAPVLEAAWQAM 93 Query: 118 LEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 PK +I++G+CA GGM+ + Y+V+ G+++ + +D+ IPGCPP P+ + L L Sbjct: 94 PTPKGLIAVGSCALDGGMFPENYTVLGGLERRVSIDLKIPGCPPAPQDVLNGLCSL---F 150 Query: 177 GKERRP 182 GK+ P Sbjct: 151 GKQAVP 156 >UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Actinomycetales RepID=A1SQ82_NOCSJ Length = 162 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 4/111 (3%) Query: 62 SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 SC C +E+ +F V+D R+GA ++ ASPR AD+++V G M ++R + Sbjct: 47 SCNGCEIEVGGAFGPVYDAERYGARLV-ASPRHADVVLVTGVVTHNMLEPLRRTVEATPR 105 Query: 120 PKWVISMGACA-NSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 P+ V+++G CA N G Y V V + VD+ +PGCPP P A + AL Sbjct: 106 PRLVLAVGDCARNCGAFKGGYGVAGAVHDAVDVDLEVPGCPPEPAAIVDAL 156 >UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Proteobacteria RepID=Q12F15_POLSJ Length = 181 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 8/124 (6%) Query: 62 SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 SC C +E+ +++ G + + ASPR AD+++V G M ++R YD E Sbjct: 53 SCNGCELEIHALNNPYYNIEGLGIKFV-ASPRHADMLLVTGPVSRHMDEALRRTYDATPE 111 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 PK V+++G C +GG++ D Y+ V IPVDV +PGCPP P ++ ++ + + Sbjct: 112 PKLVVAVGDCGCTGGIFGDSYASCGRVANVIPVDVTVPGCPPPPIEILRGIL----TAVR 167 Query: 179 ERRP 182 +RRP Sbjct: 168 QRRP 171 >UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN5_METS5 Length = 203 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 11/127 (8%) Query: 46 VNWGRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCF 103 V + R ++P + G SC C +E+ + +D+ RFG +P+ AD +++ G Sbjct: 78 VTFKRSFYLYPLDAG-SCGGCNLELRLISSPQYDMTRFGI-FFTNTPKHADALLIMGNLG 135 Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPE 163 +M VI+R YD + PK VI +G CA SGG+ I ++G DV +PGCPP P Sbjct: 136 KRMEEVIRRAYDVIPSPKLVILLGTCAISGGVTGIPPDIRG-------DVIVPGCPPTPA 188 Query: 164 AYMQALM 170 + + AL+ Sbjct: 189 SILDALI 195 >UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICA0_9EURY Length = 179 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 12/111 (10%) Query: 62 SCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPK 121 S C E+ + +D+ R G PR AD+++V G KM PV++ Y+QM EPK Sbjct: 75 SSCNREISLLNSPQYDLHRLGF-FFTPVPRHADILLVIGEPTEKMIPVLKEAYEQMPEPK 133 Query: 122 WVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 V++ GACAN + ++K I VD + GCPP+P A ++AL++L Sbjct: 134 IVMTAGACAN-----------EKIEKIIKVDARVSGCPPQPIAILKALLML 173 >UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Euryarchaeota RepID=C5U7Y6_9EURY Length = 154 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 75/124 (60%), Gaps = 12/124 (9%) Query: 57 YNFGLSCCYVEMVTS-FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP-VIQRLY 114 Y G + C +E V + F+ +D ++ L +PR+ D+++V+G C TK ++++Y Sbjct: 24 YTGGCNGCDIEAVNAVFSPYYDAEQYNV-FLTFNPRETDILIVSG-CVTKFVKESLRKIY 81 Query: 115 DQMLEPKWVISMGACANSGGMY-----DIYS---VVQGVDKFIPVDVYIPGCPPRPEAYM 166 +++ EPK V+++G+CA +GG+Y D+ + V V+ IPVDV +PGC PRPE + Sbjct: 82 EKIPEPKAVVAIGSCALTGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCAPRPEDII 141 Query: 167 QALM 170 ++ Sbjct: 142 SGIV 145 >UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=Gallus gallus RepID=UPI0000E81815 Length = 187 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 48/149 (32%) Query: 38 FMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMV 97 + KL+D++NW R+ S+WP C++ Sbjct: 83 IVTKLDDLINWARRTSLWPSMLAQQNCHLH------------------------------ 112 Query: 98 VAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIP 156 P + L EP+ CAN GG Y YSVV+G D+ +PVD+Y+P Sbjct: 113 ----------PALLGL--SAAEPE-----DGCANGGGYYHYSYSVVRGCDRIVPVDIYVP 155 Query: 157 GCPPRPEAYMQALMLLQESIGKERRPLSW 185 GCPP EA + ++ LQ+ I +ER+ W Sbjct: 156 GCPPTAEALLYGILQLQKKIKRERKLQIW 184 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 10/143 (6%) Query: 43 NDMVNWGRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 + +GR I + G SC C E+ +++ R G SPR ADL++V G Sbjct: 129 KSLAGFGRSLHIRHVDAG-SCNGCESEISALLNPFYNLHRLGV-FFTPSPRFADLLLVTG 186 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCP 159 M + R ++ M EP+WV+++G CA GG Y+ QG+D +PVD+++PGCP Sbjct: 187 PVTEVMREPLLRTFEAMPEPRWVMALGTCATGGGTNGGGYACHQGLDGILPVDIWLPGCP 246 Query: 160 PRPEAYMQALMLLQESIGKERRP 182 P P A ++AL++L +RRP Sbjct: 247 PNPAAIIEALLVLL-----DRRP 264 >UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Epsilonproteobacteria RepID=A6Q6W5_SULNB Length = 168 Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 16/155 (10%) Query: 27 DPLEQEVNKNV---FMGKLN-DMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFG 82 + +++E+ +NV F G L MV+ G N+ C E +D+ R G Sbjct: 25 EAIKREIKENVKKKFAGSLAIRMVDSGSCNA----------CEAECNALSNPYYDLERLG 74 Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSV 141 + ASPR AD+M++ G M P + Y Q+ EPKWVI++GAC ++ ++V Sbjct: 75 IYFV-ASPRHADVMLLNGLMTFNMTPHVLDAYKQIPEPKWVITLGACPVMEAPFEKTFAV 133 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 +PV +IPGCPP P ++ L+ + I Sbjct: 134 KAPAADHLPVAHHIPGCPPEPLEIIRGLLEFLKKI 168 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 2/87 (2%) Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG + + ASPR AD +VV G M +++ ++ M PK VI++GA A SGG++ Sbjct: 180 DLGRFGIQFV-ASPRHADGLVVTGPVSKGMELALRKTWEAMPAPKIVIAVGAEAISGGVF 238 Query: 137 DIYSVVQ-GVDKFIPVDVYIPGCPPRP 162 + V+ GVD +PVD+YIPG PP P Sbjct: 239 AGHPQVRNGVDAIVPVDLYIPGWPPHP 265 >UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteria RepID=Q2T5T7_BURTA Length = 174 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 5/117 (4%) Query: 49 GRKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 GR I + G SC C +E+ +++ G + + ASPR AD++++ G M Sbjct: 41 GRALCIRAIDAG-SCNGCELELNALGNPYYNIEGLGIKFV-ASPRHADMLLITGPLTLNM 98 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRP 162 ++ YD PK V++ G CA +GG++ Y+V V+ +PVDV I GCPPRP Sbjct: 99 RDAVRLAYDATPAPKLVVAAGDCACTGGVFAGSYAVCGPVETLVPVDVAIAGCPPRP 155 >UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZJ00_GLUDA Length = 166 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 10/114 (8%) Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVD 146 A+PR A++++V G MAPV++ + M EP+ ++++GACA GG + + Y+V+ G++ Sbjct: 61 ATPRLAEVLLVTGPLTRAMAPVLEAAWHAMPEPRALVAVGACAIDGGPFPENYAVLGGLE 120 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 +D+ +PGCPP P A + L + E V G GV + + S Sbjct: 121 GRATLDMTVPGCPPSPAAILAGLARVLE---------RDVAGQAGVAESGLSSS 165 >UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW77_ACICJ Length = 164 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 15/142 (10%) Query: 48 WGRKNSIWPYNFGLSC--CYVEMVT-----SFTAVHDVARFGAEVLRASPRQADLMVVAG 100 GR ++ + G SC C +E+ A H +A E LRA AD+++V G Sbjct: 22 LGRSLAVRHVDAG-SCGGCEIEIAACRRLRGGMAAHGIAMV--EDLRA----ADILLVTG 74 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCP 159 +A +++ M P++V++ G CA GG++ + +V+ GV IPVD+ I GCP Sbjct: 75 VATRNLAEAVRKSLAGMAPPRFVVAAGDCALDGGVFKGVPAVLGGVQAVIPVDLLIAGCP 134 Query: 160 PRPEAYMQALMLLQESIGKERR 181 P P + L+ L E+ +E R Sbjct: 135 PAPRQILAGLVALVEANAREPR 156 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 3/108 (2%) Query: 64 CYVEM-VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKW 122 C VE+ VT+ DV + G P +AD++++ G + RLY + E K Sbjct: 26 CDVELAVTAAVDEFDVEQLGCRYTE-EPHEADILLITGPLTVRARNEALRLYAEAPETKV 84 Query: 123 VISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 +++G C SGG++ D Y+V V +++PVD+ +PGCPPRP+A + + Sbjct: 85 TVAVGVCPVSGGVFRDSYAVDGPVQRYLPVDLNVPGCPPRPQALLAGI 132 >UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=Sulfolobus RepID=D2PJN5_SULIS Length = 201 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 15/128 (11%) Query: 50 RKNSIWPYNFGLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 R ++P + G +C C +E+ + +D+ RF +PR AD +VV G KM Sbjct: 83 RSFYLYPIDSG-TCGGCNMELKLISSPEYDMTRFSI-FFTNTPRHADALVVMGVMTEKMK 140 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVD--VYIPGCPPRPEAY 165 V+++ Y+ M EPK VI +GACA SGG+ + + +P++ V I GCPP P Sbjct: 141 EVLKKAYEAMPEPKVVILLGACAISGGI---------IGEGVPLEAVVEISGCPPNPFTI 191 Query: 166 MQALMLLQ 173 ++ALM ++ Sbjct: 192 LEALMKVK 199 >UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GND6_PARBA Length = 159 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 4/90 (4%) Query: 19 LQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDV 78 +++ E ++ + + KN G ++ +VNW R+ S+WP +FGL+CC +EM+ +D Sbjct: 22 IREAERISSLISLQEEKN---GSIDKVVNWAREGSLWPLSFGLACCNMEMMAVSMPRYDQ 78 Query: 79 ARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 R G + RASPRQ+D+++VA + P Sbjct: 79 DRLGT-IFRASPRQSDVIIVADAVTKQDGP 107 >UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC3_9PROT Length = 140 Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 6/120 (5%) Query: 54 IWPYNFGLSC--CYVEMVTS-FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVI 110 I+ N G SC C VE+ S ++ D+ + G E + S AD+ ++ G + P + Sbjct: 9 IFRINTG-SCNGCDVEIAASVMSSRFDLQKLGCEYIETS-EDADIFMITGPVTARSLPFL 66 Query: 111 QRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 + + +P VIS+G C+ + G++ D Y ++ VD ++ VDV + GCPPRP+A ++ + Sbjct: 67 KEVIKNHKKPYVVISLGTCSVTCGIFRDSYPILGPVDSYVNVDVNVAGCPPRPQAILEGV 126 >UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermoplasmatales RepID=Q978D5_THEVO Length = 222 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 7/121 (5%) Query: 50 RKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 R ++P + G C +E ++ F+ +D R G ++ +PR AD ++V G M Sbjct: 87 RSFHVFPIDSGACGACNMEFLSIFSPQYDANRLGIFMVN-TPRYADALIVMGVMTPGMKE 145 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQA 168 + R Y+ M EPK VI+MGACA +GG+ + + +K+ +V I GCPP P + A Sbjct: 146 ALDRAYEAMPEPKLVIAMGACAVTGGIMGENPLDR--EKY---NVEIAGCPPSPYTLIAA 200 Query: 169 L 169 L Sbjct: 201 L 201 >UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=3 Tax=cellular organisms RepID=B6YT72_THEON Length = 266 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 24/144 (16%) Query: 52 NSIWPYNF-GLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 S+W ++ SC C +E++ T +D R G +++ SPR AD ++V+G + Sbjct: 5 KSVWVFHVDSGSCNGCDIEILDVLTPYYDAERLGIKLV-PSPRHADALLVSGPLTRQTYY 63 Query: 109 VIQRLYDQML-EPKWVISMGACANSGGM-YDIYSVV-----QGVDKF----IPV------ 151 ++ Y+ M +P+ V+++G CA+SGG+ Y+ Y + +G D+ I V Sbjct: 64 AVKAAYEAMPPKPRIVVAIGTCASSGGIFYNGYPIYNPNPERGSDRLRTGGIEVLLAEYG 123 Query: 152 ---DVYIPGCPPRPEAYMQALMLL 172 D+YIPGCPP PE + L L Sbjct: 124 KKPDMYIPGCPPSPEEILYGLAQL 147 >UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacterium acnes RepID=Q6A6I9_PROAC Length = 132 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 10/135 (7%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 ++W S++ + L+CC VE S AV A E+ +P +++V+GT T Sbjct: 3 FIDWFADGSVYVVDLALACCGVE---SGAAVLANAPVREEIPDGAPI---VVLVSGTVTT 56 Query: 105 KMAPVIQRLYDQML--EPKWVISMGACANSGGMY-DIYSVVQGV-DKFIPVDVYIPGCPP 160 +APV+ ++ P V++ GACA +GG Y D VV G+ D + D +IPGCPP Sbjct: 57 GLAPVVSDTVHELKRNHPVDVVAFGACACAGGPYWDSAGVVAGLPDAGVDADHWIPGCPP 116 Query: 161 RPEAYMQALMLLQES 175 PE L +E+ Sbjct: 117 GPETLTGLLASSREA 131 >UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B297_SULD5 Length = 138 Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 9/111 (8%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRA----SPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 C VE++ S + +FG + L P A++++V G + P +Q Q+ Sbjct: 18 CDVEILASVL----LPKFGFDALGCVYTNDPTLANILLVTGAITARSTPYLQAALKQLPS 73 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 K V+++G C SGG++ D Y++ +D F+ VDV I GCPP P+ Q L Sbjct: 74 KKIVVALGICPISGGVFRDSYAITGPLDTFVDVDVNISGCPPSPKEIAQGL 124 >UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospirillum RepID=A3ETD3_9BACT Length = 169 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ-GVD 146 ASPR ADL++V G +M + ++ M PK V+++G CA GG++ V+ GVD Sbjct: 72 ASPRHADLLLVTGPVSCQMEQPLLDTHEAMASPKTVLAVGDCACQGGVFRGSPAVRNGVD 131 Query: 147 KFIPVDVYIPGCPPRPEAYMQAL 169 P +PGCPP P ++AL Sbjct: 132 GLFPEARKVPGCPPSPSDILRAL 154 >UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU6_LEPBA Length = 273 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 7/106 (6%) Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 E+ SF +V D R G + ASP+ AD +V +G +M +Q +D + EP+ +I+ Sbjct: 155 ELNASFNSVFDSEREGIRCV-ASPKHADTIVFSGPISEQMEGPLQTAWDVLSEPRALIAC 213 Query: 127 GACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 G A SGG++ + + D+YI G PPRP+ +Q LL Sbjct: 214 GTEAVSGGLFPKGKIPK------EPDLYISGDPPRPDVILQGFRLL 253 >UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTX0_THEON Length = 273 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 36/165 (21%) Query: 52 NSIWPYNFGL-SC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 SIW ++ SC C +E++ T +DV RFG +++ SPR A ++V+G + Sbjct: 8 RSIWVFHLNTGSCNGCDIEIIDVLTPFYDVERFGIKLV-GSPRHAHALLVSGPLTRQAYY 66 Query: 109 VIQRLYDQML-EPKWVISMGACANSGGM-YDIYSVVQ---------------GVDKFI-- 149 + M EP+ ++++G C SGG+ Y+ Y V + G+ + I Sbjct: 67 GAKETIKAMPPEPRVIVAIGTCTCSGGIFYNGYPVYRRPESGREGSEYPRRGGIAELIAD 126 Query: 150 ---------PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 PV +YIPGCPPRPE + + L +G + LS+ Sbjct: 127 LRDEGEKVGPV-IYIPGCPPRPEEIIYGIAQL---VGLVEKKLSY 167 >UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophilus torridus RepID=Q6L0U2_PICTO Length = 202 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 8/109 (7%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWV 123 C E+ + +D+ R+ +PR AD ++++G M VI M +P ++ Sbjct: 100 CNSELFSISIPEYDLTRYHI-FFTNTPRHADAIILSGIYNESMKDVIDNALGAMPKPGYL 158 Query: 124 ISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 I +GACA SGG + G I + IPGCPP P ++ L L Sbjct: 159 ILLGACALSGG-------IIGSGHEIKAVLEIPGCPPNPYTILKGLRRL 200 >UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 Tax=Thermococcus RepID=C5A2Q7_THEGJ Length = 283 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 28/135 (20%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQML-EPKW 122 C +E+ T +D R G L ASPR A M G + + M +P+ Sbjct: 19 CEIELFDILTPYYDAERLGVR-LAASPRHAHAMAATGPLTRQAYYAAKEAIKAMPPKPRI 77 Query: 123 VISMGACANSGGMY-----------------------DIYSVVQGV---DKFIPVDVYIP 156 ++++G CA SGG++ I+ +VQ + +++ VYIP Sbjct: 78 IVAIGTCACSGGIFYNGYPIYRRPESGREGQEYPRRGGIFELVQDLRDEGEYVGPVVYIP 137 Query: 157 GCPPRPEAYMQALML 171 GCPPRPE + + L Sbjct: 138 GCPPRPEEILYGVAL 152 >UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG7_GRABC Length = 174 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G S C +E+ A +AR G + SP AD++++ G + I + ++ M Sbjct: 55 GGSACLLELEALRAAPGLLARHGLRFV-TSPLHADILLITGDGCHNLTSAIHQAWEAMPG 113 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 P+W I++G A G+ G + IP D+ IPG PP + + L L Sbjct: 114 PRWAIAVGDGAAGDGLLRGSYASTGNMEEIPFDLVIPGSPPAADTILSGLRAL 166 >UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU78_GLUOX Length = 161 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G C++E+ + + + + G V + P AD +++ G A ++ R++ M Sbjct: 46 GCEGCFMEIESLNGSAFALEQAGF-VCVSDPADADWLLLTGAVTRVCAEMVDRVWRAMPP 104 Query: 120 PKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + +I++GACA GG + Y+ + G++ PV I GCPP P+ ++AL L + Sbjct: 105 GRSLIAVGACAVDGGPFPAGYATLGGLEALTPVRRSIAGCPPSPDDILRALQELAQ 160 >UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shigella sp. D9 RepID=UPI0001B52F0A Length = 173 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 24 IVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVAR 80 ++T + Q + + K+ + + S + Y G + C +E+ + T V D R Sbjct: 4 VLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAER 63 Query: 81 FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYS 140 FG +V+ +SPR AD+++ G M R Y+ + K +S GAC GG I + Sbjct: 64 FGIKVI-SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGFSTIST 122 Query: 141 V 141 Sbjct: 123 A 123 >UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO Length = 82 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 8/54 (14%) Query: 129 CANSGGMY--------DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 C+ G MY D YS V VDK IPVDVY P CP PE + A+ L+E Sbjct: 21 CSCPGSMYYHIEMFGTDSYSTVHEVDKLIPVDVYSPDCPTEPEVIIDAITKLRE 74 >UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU0_ACIC1 Length = 269 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 20/115 (17%) Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 E++ V+D+ R G ASPR AD+++V G MA + R P VI+ Sbjct: 141 EVLALLNPVYDIHRLGI-FFTASPRHADVLLVTGVGSRGMAAPLARTLQAAPRPLVVIAA 199 Query: 127 GACANSGGM-YDIYSVVQGVDKFIP------------------VDVYIPGCPPRP 162 G A SGG+ + Y+ G+ I VD+++PG PP P Sbjct: 200 GTDAISGGLVHPTYATSGGIGDLIAATPDSAGATGAADGDPVRVDIWVPGSPPTP 254 >UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax=Leptospira RepID=Q04P25_LEPBJ Length = 273 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%) Query: 66 VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVIS 125 E+ SF A+ D V+ ASP+ AD +V +G M + ++ M PK +++ Sbjct: 151 AEINASFNALFDSEASKIRVV-ASPKHADALVYSGPVGPNMEEPLNTAWETMPSPKALVA 209 Query: 126 MGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 G+ A SGG++ + + + D FI D PPRP+ + A L Sbjct: 210 CGSEAVSGGLFKLGKLPKEPDLFIGGD------PPRPDVIISAFRYL 250 >UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TXX1_METKA Length = 238 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 10/108 (9%) Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGG-------MYD---IYSV 141 AD++ V G A +++L + V+S+G+CA +GG M D + Sbjct: 42 DADILFVEGAVDFADAETLEKLEEAASAVSTVVSLGSCAATGGFERHVIGMRDPDRYHFT 101 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD 189 V KF+ D I GCPP + L L+E E RP + GD Sbjct: 102 VFPAAKFVETDYAINGCPPTTDVIASFLRALEEENEDELRPYEVLSGD 149 >UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=C7J5D7_ORYSJ Length = 114 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 40 GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 G+++D+ R + + L+ C VEM+ + + +D RF + R SPRQ+D M++ Sbjct: 38 GRVSDLQGR-RPHELGAEGVDLAYCAVEMMHAGASCYDFDRFRV-IFRPSPRQSDCMIIV 95 Query: 100 GTCFTKMAPVIQR 112 GT KM P + + Sbjct: 96 GTLTNKMGPALGK 108 >UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota RepID=A6UVU9_META3 Length = 227 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 10/82 (12%) Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY----------DIYSV 141 +AD+++V G+ ++ D + K ++++GACA +GG+ I+S Sbjct: 49 EADIILVEGSVCLDDHHAMEIAQDVGKKAKILVALGACAATGGITRFCRGGQMSKPIHSS 108 Query: 142 VQGVDKFIPVDVYIPGCPPRPE 163 + + + D+ IPGCPP PE Sbjct: 109 FSPITEVVKCDLAIPGCPPSPE 130 >UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax=Euryarchaeota RepID=FRHG_METBF Length = 259 Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 20/112 (17%) Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACA--------NSGGMYDI--YSV 141 + D+ +V G+ + ++ + + + K V+++G+CA + GG ++ + Sbjct: 53 EMDVALVEGSVCLQDHESVEDIKETRKKSKIVVALGSCACYGNITRFSRGGQHNQPQHES 112 Query: 142 VQGVDKFIPVDVYIPGCPPRPE-----AYMQALML-----LQESIGKERRPL 183 + I VDVYIPGCPP PE A M L+L +E GK +PL Sbjct: 113 YLPIGDLIDVDVYIPGCPPSPELIRNVAVMAYLLLEGNEEQKELAGKYLKPL 164 >UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R7_THEGJ Length = 229 Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 14/93 (15%) Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI----------YSVVQGV 145 ++ G C + +++ L + + + V++ G+CA+ GG+ + Q + Sbjct: 56 LITGGACMNE-PRILEELKEIREKARVVVAFGSCASLGGILRFARGGQEPRPDHRNFQPI 114 Query: 146 DKFIPVDVYIPGCPPRP---EAYMQALMLLQES 175 + IPVD IPGCPP P +++ + M ES Sbjct: 115 NSVIPVDYSIPGCPPTPQMLQSFFKFFMAGNES 147 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=... 316 2e-85 UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Pr... 272 7e-72 UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=... 253 4e-66 UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=... 253 4e-66 UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 251 1e-65 UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 251 1e-65 UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 248 1e-64 UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 247 3e-64 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 246 5e-64 UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=B... 245 7e-64 UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=B... 245 9e-64 UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=... 244 2e-63 UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 243 3e-63 UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 242 8e-63 UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=c... 241 2e-62 UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=P... 240 2e-62 UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Ta... 239 4e-62 UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=P... 239 5e-62 UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=c... 239 5e-62 UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 236 6e-61 UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax... 234 2e-60 UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=F... 234 2e-60 UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemm... 233 3e-60 UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyce... 230 3e-59 UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=... 229 5e-59 UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=De... 228 8e-59 UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=c... 228 1e-58 UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax... 228 1e-58 UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=... 227 1e-58 UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 227 1e-58 UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=S... 226 4e-58 UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 226 4e-58 UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=... 224 2e-57 UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria... 224 2e-57 UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=c... 223 4e-57 UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 ... 222 7e-57 UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=... 221 1e-56 UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 221 2e-56 UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=N... 220 2e-56 UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 219 7e-56 UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=F... 219 8e-56 UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=F... 218 8e-56 UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax... 216 3e-55 UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 216 4e-55 UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Ta... 216 6e-55 UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=... 215 1e-54 UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cy... 214 1e-54 UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=p... 214 2e-54 UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd s... 214 2e-54 UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydr... 212 5e-54 UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=... 212 8e-54 UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 212 1e-53 UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometr... 209 4e-53 UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 T... 207 2e-52 UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea R... 204 1e-51 UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 199 6e-50 UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 197 2e-49 UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=... 194 2e-48 UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 194 2e-48 UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=T... 191 1e-47 UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 190 2e-47 UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 190 2e-47 UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=T... 190 4e-47 UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea Rep... 187 2e-46 UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 ... 187 2e-46 UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 187 3e-46 UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=c... 186 4e-46 UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=T... 185 6e-46 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 181 1e-44 UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteob... 180 2e-44 UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q... 178 1e-43 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 178 1e-43 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 175 7e-43 UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacter... 175 8e-43 UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (Mbx... 175 8e-43 UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bac... 175 9e-43 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 175 1e-42 UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 175 1e-42 UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN 172 6e-42 UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 172 6e-42 UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=S... 172 7e-42 UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID... 172 9e-42 UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase sma... 170 2e-41 UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulf... 170 3e-41 UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 170 3e-41 UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 169 6e-41 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 169 9e-41 UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 168 1e-40 UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collins... 164 2e-39 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 163 5e-39 UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japoni... 163 5e-39 UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarch... 162 6e-39 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 162 7e-39 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 161 2e-38 UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collins... 161 2e-38 UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=... 161 2e-38 UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=... 161 2e-38 UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=... 159 6e-38 UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 159 7e-38 UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=I... 159 1e-37 UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 158 2e-37 UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit ... 157 2e-37 UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 157 3e-37 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 157 4e-37 UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 156 6e-37 UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxi... 154 2e-36 UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=D... 153 4e-36 UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meio... 153 5e-36 UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Ep... 152 7e-36 UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteri... 152 8e-36 UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen l... 150 4e-35 UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobac... 150 4e-35 UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfit... 150 4e-35 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 145 8e-34 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 143 4e-33 UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarch... 142 1e-32 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 141 2e-32 UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 139 5e-32 UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 138 9e-32 UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetom... 138 9e-32 UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 138 1e-31 UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 137 2e-31 UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen l... 137 3e-31 UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 137 3e-31 UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermopl... 135 1e-30 UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 133 3e-30 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 133 4e-30 UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospiri... 133 4e-30 UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 130 3e-29 UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 130 4e-29 UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 T... 129 8e-29 UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=G... 123 5e-27 UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 122 1e-26 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 121 2e-26 UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 119 7e-26 UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophi... 118 9e-26 UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, puta... 117 3e-25 UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulib... 114 3e-24 UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shige... 113 3e-24 UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 113 4e-24 UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Glucono... 113 5e-24 UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 112 8e-24 UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax... 110 4e-23 UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax... 104 2e-21 UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 102 8e-21 UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacte... 97 3e-19 UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 ... 82 1e-14 UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subuni... 77 3e-13 UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO 62 2e-08 Sequences not found previously or not previously below threshold: UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=... 66 1e-09 UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax... 65 2e-09 UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota ... 65 2e-09 UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 61 2e-08 UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n... 60 6e-08 UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomirag... 59 1e-07 UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13... 58 2e-07 UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 55 1e-06 UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subuni... 54 3e-06 UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gam... 54 4e-06 UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subuni... 53 5e-06 UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanoca... 53 5e-06 UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 ... 53 7e-06 UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=... 53 7e-06 UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=... 53 9e-06 UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=... 52 1e-05 UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Co... 52 1e-05 UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit F... 52 2e-05 UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (... 51 3e-05 UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 51 4e-05 UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermo... 50 7e-05 UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 49 1e-04 UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 49 1e-04 UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH 48 2e-04 UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 48 2e-04 UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Ta... 48 3e-04 UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=De... 48 3e-04 UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subuni... 47 3e-04 UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein... 47 4e-04 UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermoco... 47 4e-04 UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 47 6e-04 UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 47 7e-04 UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small sub... 46 8e-04 UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=6... 46 0.001 UniRef50_B4U5S1 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Hy... 46 0.001 UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 46 0.001 UniRef50_A0LKF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 45 0.001 UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 45 0.001 UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=De... 45 0.001 UniRef50_C7NU23 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 45 0.002 UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminiba... 45 0.002 UniRef50_B1L3Q1 Coenzyme F420-reducing hydrogenase, gamma subuni... 45 0.002 UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 45 0.002 UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Ta... 45 0.003 UniRef50_A2X3X1 Putative uncharacterized protein n=1 Tax=Oryza s... 44 0.003 UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subuni... 44 0.003 UniRef50_Q2IH66 Methyl-viologen-reducing hydrogenase, delta subu... 44 0.004 UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clost... 44 0.004 UniRef50_Q0FXV5 Putative uncharacterized protein n=1 Tax=Fulvima... 44 0.004 UniRef50_B9KFD7 Quinone-reactive Ni/Fe-hydrogenase, small subuni... 43 0.010 UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquifica... 42 0.010 UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria ... 42 0.011 UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteria... 42 0.013 UniRef50_C5S9B0 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 42 0.015 UniRef50_Q31DZ5 Ni,Fe-hydrogenase small subunit n=4 Tax=Proteoba... 42 0.016 UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI 42 0.021 UniRef50_D2BG44 Ni/Fe hydrogenase, small subunit n=5 Tax=Dehaloc... 41 0.025 UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n... 41 0.031 UniRef50_D2ATL3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 40 0.061 UniRef50_Q1AZS0 Ni Fe-hydrogenase III large subunit-like protein... 40 0.065 >UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=Bacteria RepID=NUOB_BLOPB Length = 236 Score = 316 bits (811), Expect = 2e-85, Method: Composition-based stats. Identities = 168/225 (74%), Positives = 197/225 (87%), Gaps = 7/225 (3%) Query: 1 MDYTLT--RIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKL----NDMVNWGRKNSI 54 M YTLT R D N E+++YPLQ+++IVTDPLE+ + +NVF GKL + +VNWGR NS+ Sbjct: 1 MKYTLTTARTD-NSEDEQYPLQEKKIVTDPLEKNIQRNVFFGKLSAFLHKIVNWGRGNSL 59 Query: 55 WPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLY 114 WPYNFGLSCCYVEM T+FTA+HDVARFG+EVLRASPRQAD MV+AGT F KM PVIQRLY Sbjct: 60 WPYNFGLSCCYVEMTTAFTAIHDVARFGSEVLRASPRQADFMVIAGTPFLKMVPVIQRLY 119 Query: 115 DQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 DQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF+PVD+YIPGCPPRPEAY+Q L+LL++ Sbjct: 120 DQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDLYIPGCPPRPEAYIQGLLLLKK 179 Query: 175 SIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDE 219 SI +ERRPLSWV+GDQG+YR NM+SER+RKR RIA T L +PD+ Sbjct: 180 SINEERRPLSWVLGDQGIYRKNMESERQRKRNTRIAETVLSSPDD 224 >UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Proteobacteria RepID=NUOB_SHEWM Length = 213 Score = 272 bits (695), Expect = 7e-72, Method: Composition-based stats. Identities = 120/212 (56%), Positives = 160/212 (75%), Gaps = 7/212 (3%) Query: 16 RYPLQKQEIV---TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSF 72 R+ L K EI+ T +++ V KN+ + +L D+V WGR NS+WP+NFGLSCCYVEM TSF Sbjct: 2 RWQLSKPEIIPTSTQTMQEVVEKNLLVTRLEDLVAWGRSNSLWPFNFGLSCCYVEMATSF 61 Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 T+ HD+ARFG+EV+RA+PR+ADL+V++GT F KMAPVI+ LYDQMLEPKWVI MG+CANS Sbjct: 62 TSRHDIARFGSEVIRATPREADLIVISGTVFLKMAPVIKHLYDQMLEPKWVICMGSCANS 121 Query: 133 GGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIG----KERRPLSWVVG 188 GGMYD+YSVVQG D+F+P+D+Y+PGCPPRPEA M L LLQE+I ++ RPL+ + Sbjct: 122 GGMYDVYSVVQGADRFLPIDLYVPGCPPRPEALMYGLTLLQEAIKDGAPRQARPLNRTIT 181 Query: 189 DQGVYRANMQSERERKRGERIAVTNLRTPDEI 220 + + ++ R+ K +RI L PDE+ Sbjct: 182 PEEIQAFACRNMRDEKHEQRIKADKLTPPDEV 213 >UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=Proteobacteria RepID=NUOB2_RHOS1 Length = 205 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 115/194 (59%), Positives = 144/194 (74%), Gaps = 1/194 (0%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 + E + + +L+D+V W RK+S+WP+NFGLSCCYVEM T+ T V+D ARFGAEV Sbjct: 10 AEAPEDRMAASHLFTRLDDLVAWSRKHSLWPFNFGLSCCYVEMATALTPVYDQARFGAEV 69 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGV 145 +R++PRQADL++V+GT F KMA + RLY QM EP+WVISMGACANSGGMYDIYSVVQGV Sbjct: 70 IRSTPRQADLLIVSGTVFRKMAVPLYRLYSQMREPRWVISMGACANSGGMYDIYSVVQGV 129 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA-NMQSERERK 204 D F+PVDVY+PGCPPRPEA M+AL+LLQ I E RPL +G+ G R + R+ Sbjct: 130 DSFLPVDVYVPGCPPRPEALMEALVLLQSKIATEARPLQIRMGETGPARPFDPIPRRDAL 189 Query: 205 RGERIAVTNLRTPD 218 R R+AVT L P+ Sbjct: 190 REARMAVTRLADPE 203 >UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOB1_THEYD Length = 199 Score = 253 bits (646), Expect = 4e-66, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 130/195 (66%), Gaps = 12/195 (6%) Query: 23 EIVTDPLEQEVN------KNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVH 76 + VT+P+E E N + L+ + +WGR +S+WP FGL+CC +EM+ + + + Sbjct: 6 DTVTEPVEIEQGIKIVPAANTIITTLDKIASWGRCSSLWPLTFGLACCAIEMMATAASHY 65 Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG ++RA+PRQAD+M++AGT KMAPVI LY QM EP++VI+MG+CA SGG++ Sbjct: 66 DLDRFGI-IMRATPRQADVMIIAGTVTKKMAPVIVNLYHQMPEPRYVIAMGSCACSGGIF 124 Query: 137 DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVG-----DQG 191 + YS VQGVD+ +PVDVYIPGCPPRPEA ++ L+ LQE I E + + D+ Sbjct: 125 NTYSTVQGVDEILPVDVYIPGCPPRPEALIEGLLKLQEKIKTEPHKKTGCLSGVCLIDKS 184 Query: 192 VYRANMQSERERKRG 206 R + +S R+ K+ Sbjct: 185 QRRCSYESCRDNKKD 199 >UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=57 Tax=cellular organisms RepID=NDUS7_MOUSE Length = 224 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 77/149 (51%), Positives = 109/149 (73%), Gaps = 2/149 (1%) Query: 38 FMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMV 97 + KL+D++NW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQAD+M+ Sbjct: 74 VVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQADVMI 132 Query: 98 VAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIP 156 VAGT KMAP ++++YDQM EP++V+SMG+CAN GG Y YSVV+G D+ +PVD+Y+P Sbjct: 133 VAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVP 192 Query: 157 GCPPRPEAYMQALMLLQESIGKERRPLSW 185 GCPP EA + ++ LQ I +E++ W Sbjct: 193 GCPPTAEALLYGILQLQRKIKREQKLKIW 221 >UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Eukaryota RepID=NDUS7_RECAM Length = 182 Score = 251 bits (641), Expect = 1e-65, Method: Composition-based stats. Identities = 81/167 (48%), Positives = 117/167 (70%), Gaps = 2/167 (1%) Query: 21 KQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVAR 80 K+EI ++ + K++++VNW RK S+WP FGL+CC VEM+ S + +D+ R Sbjct: 15 KKEIFMILNNKQNKTEFIVSKMDELVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLDR 74 Query: 81 FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IY 139 FG + R SPRQ+D+M+VAGT KMAP ++++YDQM EP+WV+SMG+CAN GG Y Y Sbjct: 75 FGI-IFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMSEPRWVVSMGSCANGGGYYHYSY 133 Query: 140 SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 SVV+G D+ +PVD+Y+PGCPP EA + L+ LQ+ I + R+ L W+ Sbjct: 134 SVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKRSRKTLYWL 180 >UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_CLOB8 Length = 169 Score = 248 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 86/152 (56%), Positives = 117/152 (76%), Gaps = 1/152 (0%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 +++++ KN+ + KL+D +N+ R +S WP FGL+CC +EM+ + A +D+ARFG EV Sbjct: 8 DKEIQEQIEKNIILTKLDDTLNYFRAHSFWPLTFGLACCAIEMMAAGGARYDIARFGYEV 67 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQG 144 RASPRQADLM+VAGT KMAP+++++YDQM EPKWVI+MG+CA SGG + D Y+VV G Sbjct: 68 FRASPRQADLMIVAGTITEKMAPIVKKIYDQMPEPKWVIAMGSCATSGGPFVDSYNVVPG 127 Query: 145 VDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 D F+PVDVYIPGCPPRPEA + L+ L+E I Sbjct: 128 ADTFLPVDVYIPGCPPRPEALIHGLLTLKEKI 159 >UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=638 Tax=cellular organisms RepID=NDUS7_HUMAN Length = 213 Score = 247 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 80/149 (53%), Positives = 109/149 (73%), Gaps = 2/149 (1%) Query: 38 FMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMV 97 + KL+D+VNW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQ+D+M+ Sbjct: 63 VVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQSDVMI 121 Query: 98 VAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIP 156 VAGT KMAP ++++YDQM EP++V+SMG+CAN GG Y YSVV+G D+ +PVD+YIP Sbjct: 122 VAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIP 181 Query: 157 GCPPRPEAYMQALMLLQESIGKERRPLSW 185 GCPP EA + ++ LQ I +ERR W Sbjct: 182 GCPPTAEALLYGILQLQRKIKRERRLQIW 210 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 246 bits (627), Expect = 5e-64, Method: Composition-based stats. Identities = 102/184 (55%), Positives = 135/184 (73%), Gaps = 4/184 (2%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 + + + KN+ + L+D +NWGRKNS+WP FGLSCC+VEM+ S T D+ARFGAEVLR Sbjct: 1 MSESIPKNIILTTLDDAINWGRKNSMWPMFFGLSCCFVEMMGSMTPRFDLARFGAEVLRG 60 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 +PR+ADLMV+AGT F KMA + R+Y++M PKWVI+MG+CANSGGMYD+YSV+QGV++ Sbjct: 61 TPREADLMVIAGTPFKKMAASMLRVYEEMANPKWVIAMGSCANSGGMYDVYSVMQGVNQV 120 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVV----GDQGVYRANMQSERERK 204 +PVDVYIPGCPPRPEA+MQ LM LQE I ++ P V+ G++G + + Sbjct: 121 LPVDVYIPGCPPRPEAFMQGLMTLQEKIARKESPARPVLNLRGGNEGTTVPILIDGSSKT 180 Query: 205 RGER 208 R R Sbjct: 181 RDTR 184 >UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=Bacteroidales RepID=NUOB_BACV8 Length = 198 Score = 245 bits (626), Expect = 7e-64, Method: Composition-based stats. Identities = 83/150 (55%), Positives = 108/150 (72%), Gaps = 1/150 (0%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 E V +G L+D++NWGR NS+WP F SCC +E + A +D ARFG EV RASPR Sbjct: 31 EGGTKVLVGCLDDLINWGRSNSLWPLTFATSCCGIEFMAVGAARYDFARFGFEVARASPR 90 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIP 150 QAD+++VAGT KMAPV++RLYDQM +PK+VI++G CA SGG + Y V+ GVDK +P Sbjct: 91 QADMIMVAGTITHKMAPVLKRLYDQMADPKYVIAVGGCAISGGPFKKSYHVLNGVDKILP 150 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VDVYIPGCPPRPEA + ++ LQ + E+ Sbjct: 151 VDVYIPGCPPRPEALLYGMIQLQRKVKLEK 180 >UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=Bacteria RepID=NUOB_RUBXD Length = 251 Score = 245 bits (625), Expect = 9e-64, Method: Composition-based stats. Identities = 88/183 (48%), Positives = 124/183 (67%), Gaps = 7/183 (3%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +++ N+ + + NW RKNS+WP FGL+CC +EM+++ A +D+ RFGA Sbjct: 4 MQKFDEPNIITTSTDKLFNWARKNSLWPLQFGLACCAIEMMSTGMAHNDLERFGAGFFAG 63 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPRQAD+M+V+GT TKMA + RLY+QM EPKWVI+MGACA SGG + D YSV+ G D+ Sbjct: 64 SPRQADVMIVSGTVSTKMAERMTRLYEQMPEPKWVIAMGACAISGGPFLDGYSVLMGADR 123 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKER-----RPLSWVVGDQGVYRANMQSERE 202 IPVDVY+PGCPPRPEA + +M LQ+ I +E+ +P +V ++G R + ERE Sbjct: 124 VIPVDVYVPGCPPRPEALIFGIMTLQKKIEREQQVGYEKPRPALVDEEGNIREYL-PERE 182 Query: 203 RKR 205 ++ Sbjct: 183 YRQ 185 >UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=Bacteria RepID=NUOB2_ACIBL Length = 202 Score = 244 bits (622), Expect = 2e-63, Method: Composition-based stats. Identities = 89/191 (46%), Positives = 128/191 (67%), Gaps = 2/191 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E + KN + ++ + NW RK+S+WP FGL+CC +EM+T+ TA +D+ARFG+EV R Sbjct: 4 IENKFEKNFLLSSVDYVFNWARKSSVWPMTFGLACCAIEMITASTARYDIARFGSEVFRP 63 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 SPRQ+DLM+VAGT KMAPV+QR+Y+QM EPKWV++MGACA+ GG ++ Y+ +QGVDK Sbjct: 64 SPRQSDLMIVAGTVTLKMAPVVQRIYEQMPEPKWVMAMGACASVGGPFNTYATLQGVDKI 123 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESIGKE--RRPLSWVVGDQGVYRANMQSERERKRG 206 +PVDVY+ GCPPRPE L+ LQ+ I + + V D+ + +S R + G Sbjct: 124 VPVDVYVVGCPPRPENLFYGLLKLQDKIDHMTLAKRPTDVRLDETMLDEFRKSVRIAQAG 183 Query: 207 ERIAVTNLRTP 217 + + P Sbjct: 184 STVVIQPAAPP 194 >UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_HELMI Length = 175 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 81/154 (52%), Positives = 111/154 (72%), Gaps = 1/154 (0%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +++ + KN+ M L + NW R NS+WP + GL+CC +EM+ + + D+ARFG EV R Sbjct: 15 VDELIKKNIIMTSLEAVFNWARGNSLWPLSSGLACCAIEMMATGASRFDMARFGYEVFRP 74 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPRQADL+++AGT KMAP IQR+Y+QM EPKW+I+MG+CA +GG + D Y+VV GVDK Sbjct: 75 SPRQADLIIIAGTLTWKMAPAIQRVYEQMPEPKWIIAMGSCACTGGPFADSYAVVPGVDK 134 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 IPVDVY+PGCPPRPEA + + L+ I + Sbjct: 135 VIPVDVYVPGCPPRPEALLDGFLKLKAKIQNPAK 168 >UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_ACIBL Length = 213 Score = 242 bits (617), Expect = 8e-63, Method: Composition-based stats. Identities = 88/164 (53%), Positives = 119/164 (72%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 ++ + + + L++ VNW RKNSIWP FGL+CC +EM++ + D+ARFGAEV R SP Sbjct: 50 EQPEEGIVLTTLDNAVNWIRKNSIWPMTFGLACCAIEMMSMGASRFDIARFGAEVFRPSP 109 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIP 150 RQ+DLM++AG KMAPVI+ LY QM EPKWVISMGACA SGG+++ Y++VQGV+++IP Sbjct: 110 RQSDLMIIAGRVSQKMAPVIRHLYLQMPEPKWVISMGACATSGGVFNNYALVQGVNQYIP 169 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 VD+Y+PGCPPRPE + A+ LLQE I ER + + V Sbjct: 170 VDIYVPGCPPRPEQLIYAITLLQEKIQAERGSFRRALNLEPVTP 213 >UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=cellular organisms RepID=NUOB_GRABC Length = 194 Score = 241 bits (614), Expect = 2e-62, Method: Composition-based stats. Identities = 83/163 (50%), Positives = 113/163 (69%), Gaps = 3/163 (1%) Query: 18 PLQKQEIVTDPLEQEV-NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVH 76 P QE V + E+ +K + L+ +VNW R S+WP FGL+CC VEM+ ++ + Sbjct: 26 PGPGQEAVLRGITGEMADKGFVVANLDKLVNWARTGSLWPMTFGLACCAVEMIHAYMPRY 85 Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG + RASPRQ+D+M+VAGT KMAP ++R+YDQM EP+WVISMG+CAN GG Y Sbjct: 86 DLDRFGV-IPRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRWVISMGSCANGGGYY 144 Query: 137 D-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 YSVV+G D+ +PVDVY+PGCPP EA + +M LQ+ I + Sbjct: 145 HYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGIMQLQKKIRR 187 >UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=Planctomycetaceae RepID=D2R5G9_9PLAN Length = 192 Score = 240 bits (613), Expect = 2e-62, Method: Composition-based stats. Identities = 89/176 (50%), Positives = 127/176 (72%), Gaps = 6/176 (3%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 ++ +NV + KL+++ NW RKNS+WP F +CC +E++ + + HD+ARFGAEV R SPR Sbjct: 4 DLPENVMVTKLDELANWCRKNSLWPMPFATACCGIELMATGASRHDLARFGAEVFRFSPR 63 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPV 151 Q DLM+VAG KM PV+QR++ QM EPKW ISMGACA++GG++D Y+VVQG+D+FIPV Sbjct: 64 QCDLMIVAGRVVMKMLPVLQRIWQQMHEPKWCISMGACASTGGVFDTYAVVQGIDRFIPV 123 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGE 207 D+Y+PGCPPRPE QA++ LQ+ I +E + G++ + + ER+R E Sbjct: 124 DMYVPGCPPRPEQLTQAIIDLQDKIQRE----GTITGEE--FETAARQERKRALQE 173 >UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Tax=cellular organisms RepID=NDHK_THEEB Length = 237 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 81/170 (47%), Positives = 110/170 (64%), Gaps = 3/170 (1%) Query: 13 ENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSF 72 N P I + QE+ +N+ + LND+ +W R +S+WP +G +CC++E Sbjct: 2 TNTTSPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMI 61 Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 + D RFG V R SPRQADL++ +GT KMAP + RLY+QM PK+VI+MGAC + Sbjct: 62 GSRFDFDRFGL-VPRNSPRQADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTIT 120 Query: 133 GGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 GGM+ D YS V+GVDK IPVDVY+PGCPPRPEA M A++ L++ I E Sbjct: 121 GGMFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIVKLRKKIANEH 170 >UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6Y4_9PLAN Length = 227 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 81/154 (52%), Positives = 108/154 (70%), Gaps = 2/154 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E V +NVF + +NW R++SIWP FGL+CC +EM+ + + +D+ RFGA RA Sbjct: 26 IEARVEENVFTTSVEQAINWARQSSIWPMTFGLACCAIEMMAAGASRYDMDRFGAGAFRA 85 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVD 146 +PRQADLM+VAGT KMA ++RLY+ M +PK+VI+MGAC GG Y Y VV+GVD Sbjct: 86 TPRQADLMIVAGTVTYKMASRVRRLYNMMPDPKFVIAMGACTVGGGPYFKWGYHVVKGVD 145 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +PVDVYIPGCPPRPEA ++ LM +Q+ I R Sbjct: 146 LVVPVDVYIPGCPPRPEALLEGLMRIQDKIKGHR 179 >UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=cellular organisms RepID=NUOB_DEIGD Length = 178 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 85/159 (53%), Positives = 119/159 (74%) Query: 22 QEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARF 81 +E+ ++ ++ V L +V WGR NS+WP FGL+CC +EM++S +D++RF Sbjct: 4 KELFDRDWQELESEGVLFSTLEKLVAWGRSNSLWPATFGLACCAIEMMSSTDGRNDLSRF 63 Query: 82 GAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSV 141 G+EV RASPRQAD+M+VAG KMAP+++R+YDQM +PKWVISMGACA+SGGM++ Y+V Sbjct: 64 GSEVFRASPRQADVMIVAGRLSKKMAPIMRRVYDQMPDPKWVISMGACASSGGMFNNYAV 123 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VQ VD +PVDV++PGCPPRPEA + A+M LQ+ + E Sbjct: 124 VQNVDHVVPVDVFVPGCPPRPEALIYAVMQLQKKVRGEA 162 >UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteroidales RepID=NUOB_AZOPC Length = 191 Score = 236 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 1/145 (0%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 N+ + KLND++NWGR NS+WP F SCC +E + A +D ARFG EV R SPRQA Sbjct: 23 GANIAIAKLNDLINWGRSNSVWPLTFATSCCGIEFMCLGAARYDFARFGWEVTRNSPRQA 82 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVD 152 D++ GT KMAPV++RLYDQM EPK+VI++G+CA SGG + Y + G+DK IPVD Sbjct: 83 DVVFCCGTIVHKMAPVLKRLYDQMSEPKYVIALGSCAISGGPFKSSYHTIMGIDKIIPVD 142 Query: 153 VYIPGCPPRPEAYMQALMLLQESIG 177 VYIPGCPPRP+A + ++ L I Sbjct: 143 VYIPGCPPRPDAMIYGMIQLARKIK 167 >UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax=Bacteria RepID=NUOB1_ROSS1 Length = 268 Score = 234 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 89/151 (58%), Positives = 114/151 (75%), Gaps = 1/151 (0%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 + VF+ + NWGR++SIWP +FGL+CC +EM+ + A D+ARFGAE+ RASP Sbjct: 10 EAEKHGVFLTTMQRFYNWGRRSSIWPLSFGLACCAIEMMATGLARFDLARFGAEMFRASP 69 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFI 149 RQADLM+VAGT KMAP + RLY+QM EP++VISMGACA SGG + D Y+V++G+D I Sbjct: 70 RQADLMIVAGTVTKKMAPQVVRLYNQMPEPRYVISMGACATSGGPFRDGYNVLRGIDLLI 129 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 PVDVYIPGCPPRPEA + ALM LQ+ I +R Sbjct: 130 PVDVYIPGCPPRPEALLHALMTLQKQIDAQR 160 >UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ6_FIBSS Length = 211 Score = 234 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 79/191 (41%), Positives = 123/191 (64%), Gaps = 4/191 (2%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 + N+ L+ +VNWGR NS+WP+ +G +CC +E +++ +D++R G+E +R + Sbjct: 3 NEAEKPNIITSSLDFLVNWGRSNSLWPFPYGTACCAIEFMSTEVGRYDLSRIGSEYVRFT 62 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQ+D+++VAGT K AP+++R+Y+QM EP+WVI+MGACA+SGG YD Y V G+D I Sbjct: 63 PRQSDVLLVAGTITYKQAPILKRIYEQMAEPRWVIAMGACASSGGFYDCYCTVPGIDHII 122 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKE----RRPLSWVVGDQGVYRANMQSERERKR 205 PVDVYI GCPPRPEA+ A+ LQ+ + E +R S + + +++RE Sbjct: 123 PVDVYIGGCPPRPEAFFDAMFDLQKKVKDESFMKQRAESVKEQLEMIKVKTAEAKREAAA 182 Query: 206 GERIAVTNLRT 216 R V +++ Sbjct: 183 CAREKVVDIKD 193 >UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Z3_GEMAT Length = 212 Score = 233 bits (594), Expect = 3e-60, Method: Composition-based stats. Identities = 79/170 (46%), Positives = 115/170 (67%) Query: 27 DPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL 86 ++ + +L+ +VNWGR S+WP FG +CC +E + + + D++RFG E L Sbjct: 16 THVDAGGHDGWITTRLDFLVNWGRAGSLWPMPFGTACCAIEFMATAASRFDLSRFGMERL 75 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVD 146 SPRQAD+++ AG K+APV++R+Y QM +PKWVISMGACA++GGM+D Y+VVQG+D Sbjct: 76 SYSPRQADVLLCAGRVPLKLAPVLRRIYQQMPQPKWVISMGACASTGGMFDNYAVVQGID 135 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRAN 196 IPVDVY+PGCPPRPEA M A+++LQ+ + +ER S + + Sbjct: 136 TIIPVDVYVPGCPPRPEALMHAIIMLQKKVMQERLKDSTRHVEIDPDPTS 185 >UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCK3_PLALI Length = 225 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 77/154 (50%), Positives = 108/154 (70%), Gaps = 2/154 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E +N+ + L +NWG+ +S+WP FG++CC +EM+ + + +D+ RFG+ RA Sbjct: 28 IEGRFEENLIVTTLEQAMNWGQLSSVWPLTFGIACCAMEMMATGMSKYDLDRFGSGAFRA 87 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD--IYSVVQGVD 146 +PRQADLM+VAGT KMA I+RLYDQM +PK+VI+MGAC GG Y Y VV+GVD Sbjct: 88 TPRQADLMIVAGTVTYKMASRIRRLYDQMPDPKYVIAMGACTIGGGPYFKYGYHVVKGVD 147 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +PVDVYIPGCPPRPEA ++ +M +Q+ I + Sbjct: 148 LVVPVDVYIPGCPPRPEALLEGVMRIQDKIRARK 181 >UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=Bacteria RepID=NUOB1_OPITP Length = 171 Score = 229 bits (584), Expect = 5e-59, Method: Composition-based stats. Identities = 82/155 (52%), Positives = 109/155 (70%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 + + + K + ++NW R NS+WP GL+CC +E++ D+ARFGAEV+R S Sbjct: 11 SSAIEGGIVVSKADAVINWIRTNSMWPMPMGLACCAIELMQVGNGRFDIARFGAEVMRFS 70 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQ+D M+VAG+ KMAP I+R+YDQM+ PKWVI+MGACA+SGGMY Y+ +QGVD+ + Sbjct: 71 PRQSDCMIVAGSVTYKMAPQIRRIYDQMMSPKWVIAMGACASSGGMYRSYAHMQGVDRIL 130 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLS 184 PVDVYI GCPPRPE + ALM LQ I ER + Sbjct: 131 PVDVYISGCPPRPEGILDALMKLQAKIRTERAGQN 165 >UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=Dehalococcoides RepID=NUOB_DEHSC Length = 200 Score = 228 bits (582), Expect = 8e-59, Method: Composition-based stats. Identities = 83/151 (54%), Positives = 110/151 (72%), Gaps = 1/151 (0%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 +E VF+ + ++NW R S+WP FGL+CC +EM+ + D+ARFG ++ RASP Sbjct: 46 EEPPPGVFITSVEKVLNWSRHYSLWPVMFGLACCAIEMMCMAASRWDLARFGMDIFRASP 105 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFI 149 RQADLM+VAGT KMAP ++R+YDQM EPKWV++MGAC SGG++ D YSVV G + + Sbjct: 106 RQADLMIVAGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGGLFRDSYSVVPGFNLVV 165 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 PVDVY+PGCPPRPEA M+A+M + E I K R Sbjct: 166 PVDVYVPGCPPRPEALMRAIMDIHEKIDKTR 196 >UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=cellular organisms RepID=C9RKY2_FIBSS Length = 419 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 88/206 (42%), Positives = 124/206 (60%), Gaps = 10/206 (4%) Query: 24 IVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGA 83 + L+ + ++ +VNW R NSIWP +G SCC +EM++S A +D+ARFG+ Sbjct: 6 LAPKILDPIPGGKYVVNAIDYVVNWARANSIWPLTYGTSCCAIEMMSSSMARYDIARFGS 65 Query: 84 EVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSV 141 EV R+SPRQADL ++AGT +MAP IQ L++Q+ PK+VI+MGAC SGG + D YSV Sbjct: 66 EVFRSSPRQADLFILAGTITRRMAPAIQMLWEQIPGPKYVIAMGACTISGGPFIYDNYSV 125 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD------QGVYRA 195 V+G IPVDV++PGCPPRPEA L+ L+E I KE W G+ YR Sbjct: 126 VRGAQNLIPVDVFVPGCPPRPEALFHGLLTLREKILKETCRNPWHEGEPKDVSTMDRYRE 185 Query: 196 NMQ--SERERKRGERIAVTNLRTPDE 219 + + E + E++A + +E Sbjct: 186 AAKTWAALEEMKDEQMAEARAKFKEE 211 >UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax=Bacteria RepID=NUOB2_OPITP Length = 191 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 87/159 (54%), Positives = 116/159 (72%), Gaps = 3/159 (1%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 T + EV++ KL+D++ GR NS+WP FGL+CC +EM+ + A D++RFGAEV Sbjct: 25 TPEIPPEVSQIARFAKLDDLLALGRANSLWPLTFGLACCAIEMMAAGMARFDISRFGAEV 84 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI---YSVV 142 R SPRQAD+M+VAGT KMAP ++ LYDQMLEPKWVI+MG CA SGG + Y+VV Sbjct: 85 FRPSPRQADVMIVAGTVNKKMAPAVKLLYDQMLEPKWVIAMGQCAISGGPFKYPGQYAVV 144 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 +GVD+ PVDVY+PGCPPRPEA ++ ++ L+E I +RR Sbjct: 145 EGVDQLFPVDVYVPGCPPRPEALIEGILKLEEKITGKRR 183 >UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=Myxococcales RepID=NUOB2_SORC5 Length = 182 Score = 227 bits (580), Expect = 1e-58, Method: Composition-based stats. Identities = 81/174 (46%), Positives = 113/174 (64%), Gaps = 11/174 (6%) Query: 10 PNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMV 69 P G +Y ++T ++Q VN ++NWGR NS+W FGL+CC +E++ Sbjct: 11 PRGWEAKYESDGGGVITTSVDQTVNW---------LLNWGRSNSVWYMLFGLACCAIELM 61 Query: 70 TSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGAC 129 + D+ RFGA R SPR +DL ++AGT KMA ++RLYDQM EP++VISMG+C Sbjct: 62 QTGGPRGDLERFGA-APRPSPRSSDLFIIAGTLTYKMATRVKRLYDQMSEPRFVISMGSC 120 Query: 130 ANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRP 182 +N GG++ YSV +GVD+ IPVDVY+PGCPPRPEA ++ L+ +QE I ER Sbjct: 121 SNCGGLFQYAYSVCKGVDQIIPVDVYVPGCPPRPEALLEGLLKIQEKIKSERAL 174 >UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_FRAAA Length = 281 Score = 227 bits (580), Expect = 1e-58, Method: Composition-based stats. Identities = 82/167 (49%), Positives = 116/167 (69%) Query: 28 PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR 87 LE+++ V + + + NW R++S+WP FGL+CC +EM+++ +D++RFG EV R Sbjct: 2 GLEEKLPGGVLLASVEKLANWSRRSSLWPATFGLACCAIEMMSTGAGRYDLSRFGMEVFR 61 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDK 147 ASPRQADLM+VAG KMAPV++++YDQM EPKWV+SMG CA+SGGM++ Y++VQGVD Sbjct: 62 ASPRQADLMIVAGRVSQKMAPVLRQIYDQMPEPKWVLSMGVCASSGGMFNNYAIVQGVDH 121 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 +PVD+Y+PGCPPRPE M A++ L E I + G Sbjct: 122 IVPVDMYLPGCPPRPEMLMDAIIKLHEKILAGPVTGRTAHTESGSSP 168 >UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=Sphingobacteriales RepID=C7PSH0_CHIPD Length = 187 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 72/150 (48%), Positives = 108/150 (72%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 E + F + ++ RKNSIWP F SCC +E + + + +D++RFG+E + + Sbjct: 18 EGYSGEGFFATTFDQVIGLARKNSIWPLPFATSCCGIEFMATMASTYDMSRFGSERMAFT 77 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQ DL++V GT KMAPV++++Y QM EP+WV+++GACA+SGG++D YSV+QG+D+ I Sbjct: 78 PRQCDLLMVMGTISKKMAPVLRQVYLQMAEPRWVVAVGACASSGGVFDTYSVLQGIDQVI 137 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 PVDVY+PGCPPRPEA + M +Q+ +G+E Sbjct: 138 PVDVYVPGCPPRPEAIIDGFMRVQDLVGQE 167 >UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_HYDS0 Length = 177 Score = 226 bits (576), Expect = 4e-58, Method: Composition-based stats. Identities = 67/147 (45%), Positives = 104/147 (70%), Gaps = 1/147 (0%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 ++++++WGR+N++WP GL+CC +EM+ + + D+ R G + RASPRQA Sbjct: 7 GNGFITTTVDELLSWGRRNALWPVTIGLACCAIEMMHAAASRFDIDRLGM-IFRASPRQA 65 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 D+++VAGT K+AP+++ ++DQM EPKW ISMG CA++GG + YS +QG+D+ IPVDV Sbjct: 66 DVLIVAGTVVNKVAPMLKLVWDQMPEPKWCISMGGCASAGGPFPTYSTLQGIDRIIPVDV 125 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKER 180 YIPGCPP P+ + L+ LQ I +++ Sbjct: 126 YIPGCPPTPQGLIYGLLELQRKIREKK 152 >UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=Bacteria RepID=NUOB2_CHLT3 Length = 195 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 80/177 (45%), Positives = 113/177 (63%), Gaps = 8/177 (4%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 V + +++NW R +S+WP FGL+CC +EM+ + + +D+ RFG R+SPRQ+ Sbjct: 10 KGGVVITAAENVLNWARLSSLWPMGFGLACCAIEMMATNASNYDLERFGI-FPRSSPRQS 68 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVDKFIPV 151 DLM+VAGT KMA + RLY+QM EP++V+SMG+C+N GG Y Y VV+GVD+ IPV Sbjct: 69 DLMIVAGTVTFKMAERVVRLYEQMPEPRYVLSMGSCSNCGGPYWEHGYHVVKGVDRIIPV 128 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKE-----RRPLSWVVGDQGVYRANMQSERER 203 DVY+PGCPPRPEA + LM +QE I +E RR + + V ++ E Sbjct: 129 DVYVPGCPPRPEALIGGLMKVQELIREEKFAGDRREAIERLKPKKVKAEDVIVETSA 185 >UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria RepID=A3THJ2_9MICO Length = 198 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 79/153 (51%), Positives = 108/153 (70%) Query: 28 PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR 87 LE+++ + L + + RK SIWP FGL+CC +EM+ T +D+ARFG E Sbjct: 2 GLEEKLPAGFVLTTLESVAGYMRKASIWPATFGLACCAIEMMAVGTPDYDIARFGMERFS 61 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDK 147 A+PRQADLM+VAG KMAPV++++YDQM PKWVISMG CA+SGGM++ Y++VQGVD Sbjct: 62 ATPRQADLMIVAGRVSNKMAPVVRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVDH 121 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 IPVD+Y+PGCPPRPE + A++ L + I + Sbjct: 122 IIPVDIYLPGCPPRPEMLLNAIIELHDQIQNSK 154 >UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=cellular organisms RepID=NUOB_LEPBA Length = 186 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 75/143 (52%), Positives = 109/143 (76%) Query: 37 VFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLM 96 + L+++V WG+ S+WPY F +CC +E +++ A +D+ARFGAE SPRQAD++ Sbjct: 18 FQVATLDNVVQWGQSFSLWPYPFATACCGIEYMSTACADYDIARFGAERPSFSPRQADMI 77 Query: 97 VVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIP 156 +V GT KMAPV++++YDQ+ EPK+VIS+GACA+SGGM+ Y V+QGVD+ +PVDVY+P Sbjct: 78 LVLGTITYKMAPVLRQIYDQLAEPKFVISVGACASSGGMFHTYGVLQGVDRILPVDVYVP 137 Query: 157 GCPPRPEAYMQALMLLQESIGKE 179 GCPPRPEA + AL+ LQ+ + + Sbjct: 138 GCPPRPEAILDALVKLQKKVQSQ 160 >UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 Tax=cellular organisms RepID=NDHK2_CYAP4 Length = 259 Score = 222 bits (566), Expect = 7e-57, Method: Composition-based stats. Identities = 73/163 (44%), Positives = 109/163 (66%), Gaps = 3/163 (1%) Query: 19 LQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDV 78 + I + + E+++N+ + L+D+ NW R +SI+P +G +CC++E + D+ Sbjct: 8 SIRNPISSAEVPPELSENIILTSLDDIYNWARISSIYPLMYGTACCFIEFAAMIASRFDM 67 Query: 79 ARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-- 136 RFG RASPRQADL+++AGT +MA +RLYDQM EPK+VI+MGAC +GGM+ Sbjct: 68 ERFGM-FPRASPRQADLIILAGTLTMQMAVPTRRLYDQMPEPKYVIAMGACMITGGMFSA 126 Query: 137 DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 D + ++G DK +P+DVYIPGCPPRPEA + A+ L++ I E Sbjct: 127 DSPTALRGADKLLPIDVYIPGCPPRPEAILDAVTKLRKKIANE 169 >UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=2 Tax=Bacteria RepID=UPI00016C3AA7 Length = 201 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 77/143 (53%), Positives = 110/143 (76%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 + + L+ + N RK+S+WP F +CC +E++ + ++ +D+ARFG+E +R SPRQ D+ Sbjct: 9 DFMIAPLDYLANMARKHSLWPMPFATACCGIELMATASSRYDIARFGSEAMRFSPRQCDV 68 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYI 155 M+VAG KM PV+QR++ QM EPKW ISMGACA+SGG++D Y+VVQG+D+FIPVDVY+ Sbjct: 69 MIVAGRVAMKMVPVMQRIWLQMPEPKWCISMGACASSGGVFDTYAVVQGIDRFIPVDVYV 128 Query: 156 PGCPPRPEAYMQALMLLQESIGK 178 PGCPPRPE ++A++ LQE I K Sbjct: 129 PGCPPRPEQLIRAVLDLQEKIQK 151 >UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Ajellomyces dermatitidis RepID=C5GDP9_AJEDR Length = 245 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 78/158 (49%), Positives = 107/158 (67%), Gaps = 3/158 (1%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 E+ F+G ++ + NWGR+ S+WP + GL+CC +EM+ +D R G + RAS Sbjct: 86 EKTGTMGHFLGSIDAVANWGRQASLWPISLGLACCGLEMMAVSMPRYDQDRLGT-IFRAS 144 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKF 148 PRQ+DL++VAGT KMAP ++ +YDQM +PKWVISMG+CAN GG Y YSVV+GVD+ Sbjct: 145 PRQSDLLIVAGTVTNKMAPALRLVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGVDRL 204 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQES-IGKERRPLSW 185 +PVDVY+PGCPP EA M A+ +++ I K R W Sbjct: 205 LPVDVYLPGCPPTAEALMYAISVVRRKLIVKSRTTRIW 242 >UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A345_NITMS Length = 174 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 80/172 (46%), Positives = 109/172 (63%), Gaps = 18/172 (10%) Query: 22 QEIVTDPLEQEVNKNVFMGKLNDM------------VNWGRKNSIWPYNFGLSCCYVEMV 69 +++VT N NVF+GKL D+ +NWGR S+WP + +CC VE Sbjct: 3 KDLVTPE-----NANVFVGKLGDILEKAIDKPLGYAINWGRIWSLWPVHIETACCSVEFG 57 Query: 70 TSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGAC 129 + + +DV RFG S RQ DL+VV GT KMAP ++ +YDQM EPK+VI+MGAC Sbjct: 58 AASSPRYDVERFGIIEAFGSLRQCDLVVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGAC 117 Query: 130 ANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 A +GG+ +D Y+V+ G+D IPVDVY+PGCPPRPE +Q +LLQE I + + Sbjct: 118 AITGGLYFDSYNVLPGIDGVIPVDVYVPGCPPRPETLIQGCILLQEKIKRMK 169 >UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_SALRD Length = 213 Score = 219 bits (557), Expect = 7e-56, Method: Composition-based stats. Identities = 79/146 (54%), Positives = 105/146 (71%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 + F +++ +NW R NS+ P GL+CC +EM+ +D ARFG+E +R SPRQA Sbjct: 9 GQGFFTTRVDTFLNWARSNSLMPMPMGLACCAIEMMGFAGPKYDSARFGSEAMRFSPRQA 68 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 DLM+VAG C KM+ I+R++DQM +PKW I+MGACA++GGM+ Y VVQGVD F+PVDV Sbjct: 69 DLMIVAGWCSYKMSHAIRRVWDQMGDPKWCIAMGACASTGGMHRCYGVVQGVDNFLPVDV 128 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKE 179 YI GCPPRPE+ + ALM +QE I E Sbjct: 129 YISGCPPRPESVLHALMDIQEKIRNE 154 >UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=Firmicutes RepID=NUOB_DESRM Length = 196 Score = 219 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 85/165 (51%), Positives = 111/165 (67%), Gaps = 2/165 (1%) Query: 14 NDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVE-MVTSF 72 + K+ + EV + V +G L ++N R NS+WP FGL+CC +E ++ + Sbjct: 20 EETVKRLKKLGAEPAVIGEVARTVSVGPLEKLLNLARANSLWPMGFGLACCAIEGLMAAN 79 Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 A D+ARFG EV+RASPRQAD+M+V GT K AP + RLY+QM EPK+VI+MG+CA S Sbjct: 80 MARFDLARFGYEVMRASPRQADVMLVCGTVTKKAAPFVVRLYEQMAEPKYVIAMGSCAIS 139 Query: 133 GGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 GG + D YSVV GVDK IPVDVYIPGC PRP+A + M L+E I Sbjct: 140 GGPFVDSYSVVPGVDKLIPVDVYIPGCAPRPDAVIHGFMKLKEKI 184 >UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=Flavobacteriaceae RepID=C6X0Z2_FLAB3 Length = 185 Score = 218 bits (556), Expect = 8e-56, Method: Composition-based stats. Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 5/162 (3%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 +P E + F KL+ ++ RK S+WP F SCC +E + +D +RFG E Sbjct: 12 AEPPEGFEGEGFFATKLSSVIGMARKYSLWPLPFATSCCGIEFMAVLNPTYDASRFGMER 71 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGV 145 SPRQAD+++V GT K+ PV++++Y QM EP+WV+++GACA+SGG++D YSV+QG+ Sbjct: 72 NSFSPRQADMLMVCGTISKKLGPVLKQVYTQMAEPRWVVAVGACASSGGIFDTYSVLQGI 131 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQ-----ESIGKERRP 182 DK IPVDVY+PGCPPRPE ++ +M +Q ESI + P Sbjct: 132 DKIIPVDVYVPGCPPRPEQIIEGVMQVQALCEGESIRRRDMP 173 >UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax=Bacteria RepID=NUOB2_STRGG Length = 235 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 80/156 (51%), Positives = 106/156 (67%), Gaps = 1/156 (0%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 + ++NWGR+ S+W +NFGL+CC +E + + A HD R G PRQADLM+V+G Sbjct: 41 PMKVVLNWGRRYSLWVFNFGLACCAIEFIAASMARHDFIRLGVIPFAPGPRQADLMIVSG 100 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCP 159 T KMAP ++RLY+QM EPK+VIS GAC+N GG Y D YSV +GVD+ IPVDVY+PGCP Sbjct: 101 TVTDKMAPAVKRLYEQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYVPGCP 160 Query: 160 PRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA 195 PRPEA +Q ++ LQE I +E + G G + Sbjct: 161 PRPEALLQGILKLQEKIARESLAERYATGATGGGPS 196 >UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_SORC5 Length = 194 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 72/162 (44%), Positives = 104/162 (64%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 +++ ++NW +K S++ Y F +CC +E + + D+ARFGAEV R SPRQA Sbjct: 18 EHGFATTRVDALLNWAKKYSLFQYPFVTACCGMEYMAMASPRFDMARFGAEVPRFSPRQA 77 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 DL+ V GT + AP ++R+Y+QM +PKWV++ G CA+ GG YD Y+ V G+DK IP DV Sbjct: 78 DLLWVVGTISQRQAPALKRIYEQMADPKWVLAFGTCASCGGFYDNYTTVAGIDKVIPCDV 137 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA 195 Y+PGCPPRPEA + LMLLQ+ I + R + V + + Sbjct: 138 YVPGCPPRPEAVLDGLMLLQDKIARGDRTPAIVKPREDPAQT 179 >UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Tax=Thaumarchaeota RepID=A0RY66_CENSY Length = 160 Score = 216 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 76/155 (49%), Positives = 101/155 (65%), Gaps = 6/155 (3%) Query: 27 DPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL 86 D LE+ ++K L +NWGR S+WP + +CC VE + +DV RFG Sbjct: 6 DILEKAIDK-----PLGYAINWGRIWSLWPVHIETACCSVEFGAASGPKYDVERFGIIEA 60 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGV 145 S RQ DL+VV GT KMAP ++ +YDQM EPK+VI+MGACA +GG+ +D Y+V+ G+ Sbjct: 61 FGSLRQCDLIVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGI 120 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 D +PVDVY+PGCPPRPE +Q MLLQE I + R Sbjct: 121 DGVLPVDVYVPGCPPRPETLIQGCMLLQEKIKRMR 155 >UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=Actinomycetales RepID=NUOB1_SALAI Length = 188 Score = 215 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 1/144 (0%) Query: 37 VFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLM 96 V + ++NWGR+ S+W +NFGL+CC +E + + + HD R G PRQADLM Sbjct: 6 VLGEPIRFVLNWGRRYSLWVFNFGLACCAIEFIATSMSRHDFMRLGVIPFAHGPRQADLM 65 Query: 97 VVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYI 155 VV+GT KMAP I+RLYDQM EPK+VIS GAC+N GG Y D YSV +GVD+ IPVDVY+ Sbjct: 66 VVSGTVTDKMAPAIKRLYDQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQLIPVDVYV 125 Query: 156 PGCPPRPEAYMQALMLLQESIGKE 179 PGCPPRPEA + ++ LQE I E Sbjct: 126 PGCPPRPEALLHGILRLQEKIAAE 149 >UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cystobacterineae RepID=NUOB_MYXXD Length = 187 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 76/161 (47%), Positives = 109/161 (67%), Gaps = 2/161 (1%) Query: 19 LQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDV 78 IVT ++ + ++ + W RK S++ Y + +CC +E ++ + HD+ Sbjct: 4 ADLANIVTTRRDESMGW--LQSIVSKGLGWARKYSLFTYPYATACCGMEYMSVAASRHDI 61 Query: 79 ARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI 138 +RFGAE R SPRQADL++V GT K AP+++R+Y+QM EPKWV++ G CA+SGG YD Sbjct: 62 SRFGAEFPRFSPRQADLLMVVGTINLKQAPILKRVYEQMAEPKWVVAFGVCASSGGFYDN 121 Query: 139 YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 Y+V+QG+D+ IPVDVYIPGCPPRPE + LMLLQ+ IG + Sbjct: 122 YAVLQGIDRIIPVDVYIPGCPPRPEQVLDGLMLLQDKIGNQ 162 >UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=pseudomallei group RepID=A5TDF9_BURMA Length = 293 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 77/157 (49%), Positives = 104/157 (66%), Gaps = 3/157 (1%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFG 82 + PL E + L+ + +KNS+W FGL+CC VEM+ + A +D+ RFG Sbjct: 126 GMANHPLTLE-KDGFIVTTLDAAMAAAQKNSLWYMTFGLACCAVEMMHAAGARYDMDRFG 184 Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSV 141 + RASPRQ DLM+VAGT KMAP ++R+YDQM EP++V+SMG+CAN GG Y YSV Sbjct: 185 M-IPRASPRQCDLMIVAGTLTNKMAPAMRRVYDQMAEPRYVVSMGSCANGGGYYHYSYSV 243 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 V+G D+ +PVDVY+PGCPP EA + LM LQ + + Sbjct: 244 VRGCDRIVPVDVYVPGCPPTAEALVYGLMQLQRKVAE 280 >UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC56_9ZZZZ Length = 182 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 111/180 (61%), Gaps = 10/180 (5%) Query: 1 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG 60 M+ ++ I P+G Q+IV D + + K + KL + WGRKNS+W + Sbjct: 1 MESSMKNILPDGTKTIV----QDIV-DGVNVAIKKVPLVKKL---ITWGRKNSLWVVHLT 52 Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP 120 CC E A +D+ RFG V+ A+ RQ D++++ G KMA V++R YDQM +P Sbjct: 53 TGCCSPEFAALAGAGYDMERFGPLVM-AAMRQCDILIIEGQVADKMAEVVKRTYDQMPDP 111 Query: 121 KWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 K+VI++G CA SGG Y D YS+V G+DK IPVDVY+PGCPPRPE ++ A+ L+Q + KE Sbjct: 112 KYVIAVGNCAISGGFYWDSYSMVMGIDKIIPVDVYVPGCPPRPEDWIDAIRLVQTRMDKE 171 >UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydrogenasei, chain b) (Ndh-1, chain b) n=1 Tax=Persephonella marina EX-H1 RepID=C0QR84_PERMH Length = 181 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 66/152 (43%), Positives = 108/152 (71%), Gaps = 1/152 (0%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 N + + + ++++WGR+NS+WP + GL+CC +EM+ + + D R G + R SPRQ+ Sbjct: 6 NNGIILTTVEEVLSWGRRNSLWPASVGLACCAIEMMHTAASRFDTDRLGI-IFRGSPRQS 64 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 D+++VAGT K+AP+++ +YDQM +PKWVI+MG C+++GG + Y+ +QGVD+ IPVDV Sbjct: 65 DVLIVAGTVVNKVAPMLKLIYDQMPDPKWVIAMGGCSSAGGPFPTYATLQGVDRIIPVDV 124 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 Y+PGCPP P+A + ++ LQ+ I ++ W Sbjct: 125 YVPGCPPTPQALLWGILELQKKIKAKKEGKVW 156 >UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31273 Length = 229 Score = 212 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 79/190 (41%), Positives = 120/190 (63%), Gaps = 10/190 (5%) Query: 11 NGENDRYPLQKQ--------EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLS 62 G + + +Q+Q ++ LEQ V + V L+ + W R NS++P FGL+ Sbjct: 14 EGGGEEFRIQQQRARDMLRGDLTDRELEQYVEERVLTTTLDKVTAWARGNSMFPATFGLA 73 Query: 63 CCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKW 122 CC +EM++ A D+ RFG E RASPRQAD+++++G KMAP+++R+YDQMLEP+W Sbjct: 74 CCAIEMMSLPGARLDIGRFGFEAFRASPRQADMLILSGRVSIKMAPIVRRIYDQMLEPRW 133 Query: 123 VISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRP 182 ISMGAC +S G+++ Y++V DKF+P+DV++PGCPPRPEA A++ L+ + P Sbjct: 134 AISMGACCSSMGVFNNYALV-PADKFMPIDVHVPGCPPRPEALAHAILKLRSKVHGNP-P 191 Query: 183 LSWVVGDQGV 192 W + V Sbjct: 192 AGWRERYEAV 201 >UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGC1_9EURY Length = 172 Score = 212 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 66/142 (46%), Positives = 98/142 (69%), Gaps = 1/142 (0%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 +N ++NWGR NS+WP FG SCC +EM+T D R G SPRQ+DL++V+GT Sbjct: 24 INTVLNWGRSNSLWPLTFGTSCCAIEMMTFGATKVDADRLGVLFNGDSPRQSDLILVSGT 83 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 KMA + +Y+Q+ +PK+VI++GAC SGG+Y D Y+ ++G+D+ +PVD +IPGCPP Sbjct: 84 ITKKMARRLLNVYEQIPDPKYVIAVGACNVSGGLYHDSYNTIEGIDRIMPVDAFIPGCPP 143 Query: 161 RPEAYMQALMLLQESIGKERRP 182 RPE ++ A+ +LQ+ I + R Sbjct: 144 RPEEFLDAVRVLQKLIKENRSK 165 >UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VB41_9EURY Length = 236 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 115/175 (65%), Gaps = 8/175 (4%) Query: 7 RIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYV 66 R+ +G ++R+ + +E + K ++ +NW R +S++ FG++CC + Sbjct: 24 RMTGSGADNRFNSKLREAFGSSP-------FILTKFDNFMNWVRGSSMFMLQFGIACCSI 76 Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 EM+ +++ HD+ RF A V RASPRQAD+++V GT +K AP ++R+YDQM EPK+V+ M Sbjct: 77 EMMHTYSVKHDLDRFAAGVPRASPRQADVIIVPGTIVSKFAPRMKRVYDQMPEPKFVVGM 136 Query: 127 GACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 G+C SGG + + Y+V++G ++ IPVD+++PGCPPRPEA + + LQ+ I + Sbjct: 137 GSCTVSGGPFQEGYNVIKGAEEVIPVDIHVPGCPPRPEALIYGVAKLQQRIAEGE 191 >UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 Tax=Halobacteriaceae RepID=B0R3U2_HALS3 Length = 235 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 73/171 (42%), Positives = 112/171 (65%), Gaps = 8/171 (4%) Query: 11 NGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVT 70 +G +DR+ + +E + K + +NW R +S++ FG++CC +EM+ Sbjct: 27 DGVDDRFNSRLREAFGSTP-------FILTKFDKFMNWVRGSSMFMLQFGIACCSIEMMH 79 Query: 71 SFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACA 130 +++ HD+ RF A V RASPRQAD+M+V GT +K AP ++R+YDQM EPK+V++MG C+ Sbjct: 80 TYSVKHDLDRFHAGVPRASPRQADVMIVPGTIVSKFAPRMKRVYDQMPEPKFVVNMGNCS 139 Query: 131 NSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 SGG + + Y+VV+G ++ IPVD++IPGCPPRPEA + + LQE I Sbjct: 140 TSGGPFQEGYNVVKGAEEVIPVDIHIPGCPPRPEALVYGVAKLQERIANGE 190 >UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea RepID=A0B811_METTP Length = 190 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 67/178 (37%), Positives = 113/178 (63%), Gaps = 4/178 (2%) Query: 11 NGENDRYPLQKQEIVTD--PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEM 68 + E +++ + + ++ +++++ + MG + +++NWGRKNS+W + CC VEM Sbjct: 14 DEEIEKWTIWGRPVMDVWFTTTEKIHQIIQMGPIKNVLNWGRKNSLWFLMQPMGCCGVEM 73 Query: 69 VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 + +D RFG + RA+PRQAD+M+++G K P I+ L++QMLEPKW I++G Sbjct: 74 LVFGCPHYDCDRFGI-IPRATPRQADVMIISGYITRKYLPAIKNLWEQMLEPKWCIAVGE 132 Query: 129 CANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 CA SGG + D Y+++Q F P+DVY+PGCPPRPE +++ + LQE I + + + Sbjct: 133 CAISGGPFYDSYNIIQNTSDFFPIDVYVPGCPPRPEQFIKGFVELQEKIKQRKDKRGY 190 >UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=7 Tax=Trypanosomatidae RepID=NDUS7_TRYBB Length = 202 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 66/138 (47%), Positives = 96/138 (69%), Gaps = 2/138 (1%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 L+D+ W S WP FGL+CC VEM+ ++ + +D+ RFG V R +PRQA++++V+G Sbjct: 55 TLHDLTEWCLAYSPWPLTFGLACCAVEMMHAYASRYDLDRFGI-VPRPTPRQAEIIIVSG 113 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCP 159 T KMAP+++ +Y QM+ PKWVISMG+CAN GG Y Y+V++G ++ IPVD +IPGCP Sbjct: 114 TVTNKMAPILRNIYVQMVNPKWVISMGSCANGGGYYHFSYAVLRGCERAIPVDFWIPGCP 173 Query: 160 PRPEAYMQALMLLQESIG 177 P E+ + L LQ+ I Sbjct: 174 PSAESLVFCLHTLQKKIR 191 >UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI98_9EURY Length = 206 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 5/162 (3%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 N +V W R NS+WP FGL+CC +E++ A D R G + R +PRQ D+M+VAG Sbjct: 48 NGVVKWSRSNSMWPMLFGLACCAIELMDFGAARIDAERKGYLLFRGTPRQCDVMIVAGWV 107 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPR 161 M P ++RLY+QM PK+V++ G CA +GG Y+ Y++V+G+D+ +PVDVY GCPP+ Sbjct: 108 TKSMVPRVKRLYEQMASPKYVVAYGECATAGGPWYESYNIVKGIDQVLPVDVYAIGCPPK 167 Query: 162 PEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERER 203 PE ALM LQE +G + ++ + ++E ER Sbjct: 168 PENLFAALMKLQEKVGGK----VAGSEERTIAENPRRAENER 205 >UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=Thermoprotei RepID=A2BJ94_HYPBU Length = 209 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 2/192 (1%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFG 82 + + + + + + +++WG S+WP + SCC E + +D R G Sbjct: 14 GRLEEAAAKAMKWLLERKPIKSLLDWGISFSLWPVHLTTSCCGAEFAAVYDPKYDSERLG 73 Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVV 142 + PR ++++V GT KMA + +++QM PK+VI+MGACA +GG++ + Sbjct: 74 SLPFT-HPRNTNVLLVEGTLTRKMARAARLVWEQMPWPKFVIAMGACAITGGIFYNSYNI 132 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA-NMQSER 201 V++ +PVD Y+PGCPP PEA AL+ LQE + K + + + E+ Sbjct: 133 VRVNQILPVDYYVPGCPPTPEAVANALIKLQEKVRKGEWKPRDIEDKKFLEELMAPHYEK 192 Query: 202 ERKRGERIAVTN 213 R+ E +A T Sbjct: 193 ARRHLELLARTQ 204 >UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Epsilonproteobacteria RepID=B9L626_NAUPA Length = 157 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 2/143 (1%) Query: 39 MGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 M K+ D N+ R S W +F CC +EM+ + +D R+G ++ +PRQAD+M + Sbjct: 1 MLKVLDFFNYARSKSPWIVHFCSGCCSLEMLAAMGPRYDWERYGY-IMTPTPRQADIMFI 59 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPG 157 G K+ P + R Y+QM EP++V+++GACA GG Y D SV++ + + +P DV++ G Sbjct: 60 TGLVSKKILPALLRTYEQMPEPRYVVAIGACAYDGGPYNDSVSVIKNMTEILPADVFVAG 119 Query: 158 CPPRPEAYMQALMLLQESIGKER 180 CPPRPEA + L L+E I + Sbjct: 120 CPPRPEAIIAGLEELKEKIKRGE 142 >UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=Thermoprotei RepID=A1RZ48_THEPD Length = 171 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 3/142 (2%) Query: 40 GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 + + +W S+WP +F SCC E + D RFG SPRQ +LMV+ Sbjct: 28 TPIRSLRDWAITFSLWPVHFTTSCCGAEFAATSAPRFDAERFGFLPF-NSPRQTNLMVIE 86 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGC 158 GT KM + +YDQM PK+VI+MGACA GG++ + Y++V+ D +PV+ +IPGC Sbjct: 87 GTLTKKMGEAAKIVYDQMPWPKFVIAMGACAIDGGLFYNSYNIVRPKD-ILPVEYFIPGC 145 Query: 159 PPRPEAYMQALMLLQESIGKER 180 PPRPEA QA+++LQE + K Sbjct: 146 PPRPEAVAQAIIMLQEKVRKGE 167 >UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1E3_DESDA Length = 185 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 100/172 (58%), Gaps = 10/172 (5%) Query: 39 MGKLNDMVNWGRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 MG ++ M+ R S W +F + C +E++ T ++DV RFG V +P+ AD+ Sbjct: 1 MGFVDKMIKRSRLKSPWIVHFDCGSCNGCDIEVLACLTPMYDVERFGV-VNAGNPKHADV 59 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVY 154 ++V GT + V++++Y+QM PK VIS+GAC SGG++ D Y+V+ G IPVDV+ Sbjct: 60 LLVTGTVNHRNRHVLKQIYEQMPSPKAVISLGACNLSGGVFKDTYNVLNGAHNVIPVDVF 119 Query: 155 IPGCPPRPEAYMQALML----LQESIGKERRPL-SWVVGDQGVYRANMQSER 201 +PGCPP+PEA + ++ L+ +G P +++ GD+ A + E Sbjct: 120 VPGCPPKPEAIIDGVVEALGVLKAKMGMGPVPQATFMPGDEDGTPAGARDEE 171 >UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 Length = 274 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 101/185 (54%), Gaps = 17/185 (9%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQ 92 N KL + N R S++ + G + C +E+ + T + D RFG +++ A+PR Sbjct: 12 TANDLTAKLEHLKNIKRSFSVYRIDCGSCNGCEIEIFAAITPMWDPERFGFKLV-ANPRH 70 Query: 93 ADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPV 151 AD+++ +G +M + R Y+ +PK V++ GAC +SGG++ D YSV G+DK IPV Sbjct: 71 ADILICSGPVTRQMYYPLLRAYEAAPDPKIVVAFGACGSSGGIFHDAYSVWGGIDKIIPV 130 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW-------------VVGDQGVYRANMQ 198 DVYIPGCPP P + + L + I ++ S+ V+GD ++ ++Q Sbjct: 131 DVYIPGCPPHPASVIYGLGMALGIIDQKLHKKSYEDDSTLPPPVEKSVIGDI-LFERDLQ 189 Query: 199 SERER 203 +E +R Sbjct: 190 AESKR 194 >UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=Thermoproteaceae RepID=A8MBS9_CALMQ Length = 374 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 87/143 (60%), Gaps = 2/143 (1%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 + + +WG K SIWP + +CC VE + +D R+G + PRQ + +V+ GT Sbjct: 25 DSLASWGTKFSIWPAHLVTACCGVEFAHASAPGYDAERWGFLPIFG-PRQTNSIVIEGTV 83 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRP 162 KMA +++ Y+QM PK+VI+MG+CA GG++ V V++ +PVD ++ GCPP P Sbjct: 84 TRKMARIVKTAYEQMPYPKFVIAMGSCAMEGGVFWNSYHVVRVNEIVPVDAWVMGCPPTP 143 Query: 163 EAYMQALMLLQESI-GKERRPLS 184 EA ++A+ ++Q I GKE +P Sbjct: 144 EAVIRAIRMVQSKIEGKEVKPNI 166 >UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea RepID=B1L7S0_KORCO Length = 174 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 3/141 (2%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 + D+ +WG S+WP +F +CC E S +D R G RQ +++ + G Sbjct: 30 PIRDIRDWGIAFSLWPVHFTTACCGAEFAASAAPKYDAERLGFLPFIG-IRQCNVLFIEG 88 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCP 159 T KMA +Y+QM EPK+VI MGACA GG++ + Y++V+ +D +PV+V+IPGCP Sbjct: 89 TLSKKMAEAAIWVYEQMPEPKFVIGMGACAIDGGIFWNSYNIVRPMD-ILPVNVFIPGCP 147 Query: 160 PRPEAYMQALMLLQESIGKER 180 PRPEA QA+++LQ I K Sbjct: 148 PRPEAVAQAIIMLQRKIRKGE 168 >UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R6_MAGSM Length = 213 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 89/150 (59%), Gaps = 2/150 (1%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 V ++ + D+ NW R NSIW FG C +EM T D R+G + RA+PR Sbjct: 33 TVQTGEYLQIVEDLFNWARSNSIWVLGFGTGCGAIEMRPLMTPRFDAYRYGVQ-WRATPR 91 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIP 150 Q++L +V+G K + R Y+QM PK+V+ +G+C +GGMY D Y+ ++ +D ++P Sbjct: 92 QSNLFIVSGYLSVKTLKRVVRAYEQMQSPKYVMGLGSCTINGGMYWDSYNTIKQLDDYLP 151 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VD+Y+ GC PRPEA + + L++ I + R Sbjct: 152 VDLYVTGCMPRPEALLSGIEALKKIIREGR 181 >UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN9_HALUD Length = 183 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 15/182 (8%) Query: 42 LNDMVNWGRKNSIWPYNFGL---SCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + +++W R S W + + C +E + + +DV RFG + + +PR AD++V Sbjct: 1 MGRIIDWARNRSPWILHMNCGSCNGCDIETLDALMPRYDVERFGIQQ-KDTPRHADVLVA 59 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPG 157 G +MAP ++R+Y+QM EPK VI+ G+CA +GG++ D Y+ +G+D IPVD+Y+PG Sbjct: 60 TGPVTKQMAPRLERIYEQMPEPKLVIAAGSCAATGGVFQDCYNCHEGIDDVIPVDMYVPG 119 Query: 158 CPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTP 217 CP PE + ++ L E G+E + + + G RI P Sbjct: 120 CPISPETLIDGIVALLEEAGQEAKAERLAAAKPEIVQG----------GTRIDEAVAADP 169 Query: 218 DE 219 ++ Sbjct: 170 EQ 171 >UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=cellular organisms RepID=A3DKH2_STAMF Length = 165 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 87/138 (63%), Gaps = 5/138 (3%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 + + W +F + C +E++ + T ++D RFG + L S R AD++VV G K A Sbjct: 28 RYTPWLIHFNTGACNGCDIEVLAAITPLYDPERFGIK-LAPSIRHADILVVTGAVTKKAA 86 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 ++RLY+QM +PK+V+++GACA SGG++ + YSV+ G DK IPVD+Y+PGCPPRPEA + Sbjct: 87 ERLKRLYEQMPDPKFVVAVGACAISGGVFHNSYSVLAGTDKVIPVDIYVPGCPPRPEAIL 146 Query: 167 QALMLLQESIGKERRPLS 184 ++ L + + Sbjct: 147 DGIVKLLKRLESGETKAE 164 >UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=Thermoproteaceae RepID=A4WJL4_PYRAR Length = 196 Score = 185 bits (471), Expect = 6e-46, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 40 GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 KL + NWG + S+WP + SCC VE+ + D R+G + RQ+++++V Sbjct: 20 AKLEKIFNWGVRWSLWPVHLVTSCCGVEVAHTSGPGFDAERWGVLPFH-TMRQSNVILVE 78 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCP 159 GT KMA V++ +Y+QM EPK+V++MGACA GG++ V VD +PVDVYI GCP Sbjct: 79 GTITRKMAKVLKMVYEQMPEPKFVLAMGACAVRGGLFWNSYHVVQVDTVVPVDVYIAGCP 138 Query: 160 PRPEAYMQALMLLQESIGKERRPLS 184 P PEA ++A ++L I + P Sbjct: 139 PTPEAVVRAFIMLHNKIKGKPGPFI 163 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 8/150 (5%) Query: 29 LEQEVNKN---VFMGKLNDMV--NWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFG 82 +++E+N + KLN+ V +GR +I + G + C E+ +D+ RFG Sbjct: 113 IDEEINGTDYELIGKKLNEKVAKKFGRSLNIREVDAGSCNGCDYEIQALNGPYNDIERFG 172 Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSV 141 + ASPR AD+++V G M + + Y+ PK V++ GACA SGG++ D Y+ Sbjct: 173 IHFV-ASPRHADMLLVTGCVSRNMEEALVKTYNATPSPKLVVAAGACACSGGLFKDSYAG 231 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALML 171 G+D +PVDVYIPGCPPRP+A + ++ Sbjct: 232 RNGIDTILPVDVYIPGCPPRPQALIYGILK 261 >UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteobacteria RepID=B9L8U0_NAUPA Length = 164 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 94/157 (59%), Gaps = 7/157 (4%) Query: 50 RKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 RK S W ++ G + C +E++ + +D+ RFG + R +P+Q+D+++V G + Sbjct: 8 RKKSPWILHYNTGGCNGCDIEILAALAPKYDIERFGM-LNRGNPKQSDILLVTGPVTKRC 66 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 V++RLY +M EPK V++MGACA+ GG++ D Y V GVD IPVDV+IPGC PR EA Sbjct: 67 RDVLRRLYLEMPEPKVVVAMGACAHGGGIFRDFYHVENGVDNIIPVDVWIPGCAPRVEAV 126 Query: 166 MQALMLLQESIGKERRPLSWV--VGDQGVYRANMQSE 200 + ++ + K+ + ++ ++ + + +++ Sbjct: 127 IDGMVEAVKIWEKKTKEKEFMRNHSNELLEKLGARND 163 >UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q6C2Q1_YARLI Length = 216 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 8/146 (5%) Query: 7 RIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYV 66 R+ + +PL Q+ ++ + L+ + NW R+ S WP FGL+CC V Sbjct: 35 RVSSSSMPTDFPLPSQQKPNSAVD------YTLTTLDAVANWARQGSFWPVTFGLACCAV 88 Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 EM+ +D R G + RASPRQ+D+M+VAGT KMAPV++++YDQM EP+WVISM Sbjct: 89 EMMHVSAPRYDQDRLGI-IFRASPRQSDIMIVAGTLTNKMAPVLRQVYDQMPEPRWVISM 147 Query: 127 GACANSGGMYD-IYSVVQGVDKFIPV 151 G+CAN GG Y YSVV+G D+ +PV Sbjct: 148 GSCANGGGYYHFSYSVVRGCDRIVPV 173 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 57/136 (41%), Positives = 87/136 (63%), Gaps = 3/136 (2%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +GR +I + G + C VE+ + A++D+ RFG ++ ASPR AD ++V G M Sbjct: 113 FGRSLAIREVDAGSCNGCEVEVNSLSNAIYDIERFGLHIV-ASPRHADALLVTGPVTRNM 171 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 + + Y+ +PK VI+MGACA +GG++ D Y+V GVD +PVDVYIPGCPPRP+A Sbjct: 172 ERGLMQSYNATPDPKMVIAMGACAITGGIFRDSYAVYNGVDALVPVDVYIPGCPPRPQAI 231 Query: 166 MQALMLLQESIGKERR 181 +Q +ML + ++R+ Sbjct: 232 IQGIMLAIDRWEEKRK 247 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 30 EQEVNKNVFM---GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL 86 E E ++N+ + G + W K S+WP +F SCC VE+ + +D+ R G + Sbjct: 3 ETEKDRNIRILHSGVFTPLRRWATKWSLWPCHFLTSCCGVELAHTGACGYDMERLGTLNM 62 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVD 146 S RQA+ ++V GT KMA ++ +++QM +PK+V +G C GG++ + Sbjct: 63 GIS-RQANFIMVEGTITRKMARALRIVWEQMPDPKFVNVIGTCGQRGGIFWNSYNITRPS 121 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIG 177 +PVD +IPGCP PE+ ++ + +QE I Sbjct: 122 DIVPVDFFIPGCPITPESLLRGVRAVQEKIE 152 >UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacteria RepID=HYCG_ECOLI Length = 255 Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%) Query: 28 PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVL 86 P+ V++++ K + + R ++ + G + C +E+ + + + D RFG +V+ Sbjct: 14 PVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVV 73 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGV 145 SPR AD+++ G M R + +PK IS GAC NSGG++ D+Y V G Sbjct: 74 -PSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGT 132 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALML----LQESIGK------ERRPLSWVVGDQGVYRA 195 DK +PVDVYIPGCPP P A + + L++ I + +P + GD V Sbjct: 133 DKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDM-VQPL 191 Query: 196 NMQSERERKR------GERIAVTNLR 215 ++ +RE +R G +IA L Sbjct: 192 RVKVDREARRLAGYRYGRQIADDYLT 217 >UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (MbxJ) n=11 Tax=cellular organisms RepID=C5A4Q2_THEGJ Length = 194 Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 10/173 (5%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + W RK S+W F C +EM TA +D RFG + +PR ADL ++ G Sbjct: 18 FEPLFRWARKKSLWIVAFCTGCGGIEMPPLATARYDFERFGI-MPNPAPRMADLFLITGY 76 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 K I Y+ M +PK+V++ G+C +GG+Y D Y+VV+ +DK+IP+DV I GC P Sbjct: 77 VTPKTLKRIIITYEMMQDPKYVLAHGSCPINGGVYWDSYNVVKQLDKYIPIDVAIAGCMP 136 Query: 161 RPEAYMQALMLLQESI--------GKERRPLSWVVGDQGVYRANMQSERERKR 205 RPEA M +M + I + R W +Q E++ KR Sbjct: 137 RPEAVMDGIMEIMRKIENGEADGWKRYRENYEWYRKNQDELFGEGWREKDAKR 189 >UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bacteria RepID=C7MLM8_CRYCD Length = 283 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%) Query: 11 NGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMV 69 G R Q++ + +++ + K + + R I+ + G + C +E+ Sbjct: 18 QGYETRSTATAQKLQYQLEPKVLDQKIAEAKAALLNDIKRSVYIYRVDCGGCNGCEIEIF 77 Query: 70 TSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGAC 129 + T V D RFG + + ASPR AD++V G M R Y+ +PK ++S GAC Sbjct: 78 GTLTPVFDAERFGIKNM-ASPRHADILVYTGAVTRAMRLPALRAYEAAPDPKLIVSYGAC 136 Query: 130 ANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE--RRPLSWV 186 +GG++ D Y V G DK PVDVYIPGCPP P + + +G++ + L Sbjct: 137 GCTGGIFHDNYCVWGGTDKLFPVDVYIPGCPPSPAQTIYGFAMALGLLGQKLHEKHLVEG 196 Query: 187 VGDQG-------VYRANMQSERERKR 205 G+Q Y+ + ERE +R Sbjct: 197 EGEQAPIMFADIPYKLRCELEREARR 222 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 6/171 (3%) Query: 10 PNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEM 68 P+G R ++ +I + E +++ ++ GR I + G + C VE+ Sbjct: 112 PDGTQARM-IEAPQISETGEKTEALGRELQNRIHSLL--GRSLHIREVDAGSCNGCEVEI 168 Query: 69 VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 ++D+ RFG ++ ASPR AD+++V G M +++ YD EP+ V+++GA Sbjct: 169 NALSGPIYDLERFGIHLV-ASPRHADMLLVTGPVTRNMELALRKTYDATPEPRLVVAVGA 227 Query: 129 CANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 C SGGM+ Y+ VD +PVDVYIPGCPP P A + ++L + K Sbjct: 228 CGCSGGMFGRNYATCGSVDSVLPVDVYIPGCPPNPFALLHGILLAVGRLEK 278 >UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=cellular organisms RepID=A9KS72_CLOPH Length = 144 Score = 175 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 90/140 (64%), Gaps = 9/140 (6%) Query: 51 KNSIWPYNF-GLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S W ++ G SC C +E++ T ++DV RFG + +P+ AD++++ G+ + Sbjct: 5 KKSPWIIHYDGSSCNGCDIEVLACLTPLYDVERFGI-INTGNPKHADILLITGSVNEQNI 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 PV++++Y+QM EPK V+++G CANSGG++ + Y+V GVDK +PVDVY+PGC RPEA + Sbjct: 64 PVVKQIYEQMAEPKIVVAVGICANSGGIFAECYNVSGGVDKVLPVDVYVPGCAARPEAII 123 Query: 167 QALML----LQESIGKERRP 182 ++ L+E R+ Sbjct: 124 DGVVKGLAILEEKQKYARKK 143 >UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN Length = 214 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 3/150 (2%) Query: 38 FMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMV 97 + KL+D+VNW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQ+D+M+ Sbjct: 63 VVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQSDVMI 121 Query: 98 VAGTCFTKMAPVIQRLYDQMLEPKWVISM-GACANSGGMYDIYSVVQ-GVDKFIPVDVYI 155 VAGT KMAP +++ + + + G G + ++ + G+ Sbjct: 122 VAGTLTNKMAPALRKSPPRPDAGAALRGLHGELRQRGRLLPLFLLGGEGLRPHRARGHLH 181 Query: 156 PGCPPRPEAYMQALMLLQESIGKERRPLSW 185 P P EA + ++ LQ I +ERR W Sbjct: 182 PRLPTTAEALLYGILQLQRKIKRERRLQIW 211 >UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=9 Tax=Bacteria RepID=B2IID4_BEII9 Length = 177 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 6/164 (3%) Query: 17 YPLQKQEIVTDPLEQEVNKNVFMGKLNDMVN--WGRKNSIWPYNFG-LSCCYVEMVTSFT 73 + + +T+ + +L+ + GR +I + G + C +E+ Sbjct: 6 FQGLAKPPLTEAGPTDGEIAALAAELDHLARSRLGRSLAIREVDAGSCNGCELEINALGN 65 Query: 74 AVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSG 133 A +D+ RFG + ASPR AD+++V G M + R YD PKWV++ G CA Sbjct: 66 AFYDLERFGLRFV-ASPRHADVLLVTGPVTHNMREALLRTYDATPNPKWVVAAGTCALGE 124 Query: 134 GMYDIYSVV--QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 G++ GV I VD+YIPGCPP P ++ L+ L Sbjct: 125 GVFAESYACQKGGVSAVIAVDLYIPGCPPTPTDLLKGLLALITK 168 >UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=Staphylothermus marinus F1 RepID=A3DM92_STAMF Length = 179 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 3/170 (1%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 W R SIW ++ +C +E+ + A D R+G + SPRQAD++V+ G Sbjct: 11 FAEWVRSRSIWMIHYCSACGAIELPPNMMAPLDAERWGI-MPAPSPRQADVLVIMGYVTK 69 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 K V+ RLY QM EP++V+ C +GG+Y D YS V+ VD+F+PVDV++PGC PR E Sbjct: 70 KTLKVLMRLYHQMPEPRYVMVGCNCPATGGLYWDSYSTVKAVDEFLPVDVWVPGCMPRAE 129 Query: 164 AYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTN 213 ++Q + L++ I E R ++ ++ + R + +A Sbjct: 130 DWLQGFLKLRKKIS-EGRIVNPRPVEEPGELEELIYREIEMREKMMAKVR 178 >UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID=B6IT61_RHOCS Length = 196 Score = 172 bits (435), Expect = 9e-42, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 7/156 (4%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 GR +I + G + C +E+ V+D+ RFG + ASPR AD+++V G T M Sbjct: 42 GRSLAIRQVDAGSCNACEMEIHALNNPVYDLERFGFSFV-ASPRHADVLLVTGPVTTNMR 100 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 + + ++ +PKWV+++G CA GG + D Y+VV GV+K +PVD+ IPGCPPRP + Sbjct: 101 EALLKTWEATPDPKWVVALGQCAIDGGPFADSYAVVGGVEKVVPVDLMIPGCPPRPVDIL 160 Query: 167 QALMLLQESIGKERRPLSWVVGDQGVYRANMQSERE 202 AL+ L I E RP S G + RE Sbjct: 161 AALVAL---IEAEARPPS-RPAASGTPAGAPRERRE 192 >UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase small subunit n=13 Tax=cellular organisms RepID=B6YU96_THEON Length = 175 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 5/131 (3%) Query: 52 NSIWPYNFG---LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 S W ++ + C +E++ + T +D RFG +++ SPR AD+++V G + Sbjct: 35 RSPWVFHVNSGSCNGCDIEIIAALTPRYDAERFGVKLV-GSPRHADVLLVTGPVTDQSLE 93 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 ++ +Y+Q +PK VI++G+C G ++ + + IPVDVY+PGCPPRPEA + Sbjct: 94 RVKLVYEQTPDPKIVIAVGSCPTGGSVFYESPFTNAPLSNIIPVDVYVPGCPPRPEAILY 153 Query: 168 ALMLLQESIGK 178 ++L E + K Sbjct: 154 GVVLALEKLAK 164 >UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (Complex I-20kD) (CI-20kD) (PSST subunit). n=1 Tax=Gallus gallus RepID=UPI0000EC9F96 Length = 176 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 4/150 (2%) Query: 38 FMGKLNDMVNWGRKNS-IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLM 96 + KL+D++NW R+ + W F C M H+ + FG L A + Sbjct: 26 IVTKLDDLINWARRRACFWTECF--HCVASNMGYLLWKSHERSSFGLIQLTAHMPMSTAC 83 Query: 97 VVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYI 155 + A ++P + E + +CAN GG Y YSVV+G D+ +PVD+Y+ Sbjct: 84 LPARPHENHLSPHLTSAAGLGPELCFTNIFCSCANGGGYYHYSYSVVRGCDRIVPVDIYV 143 Query: 156 PGCPPRPEAYMQALMLLQESIGKERRPLSW 185 PGCPP EA + ++ LQ+ I +ER+ W Sbjct: 144 PGCPPTAEALLYGILQLQKKIKRERKLQIW 173 >UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=cellular organisms RepID=A1ASR2_PELPD Length = 179 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 5/138 (3%) Query: 52 NSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 S+W Y+ G + C +E++ T +DV RFG +++ SPR AD+M+ G Sbjct: 12 RSLWVYHANSGGCNGCDIEVLNVLTPYYDVERFGIKLV-GSPRHADVMLCQGPAMRSTGK 70 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 +QR Y M PK V ++G+CA GG+ +D Y+V V+K IPV+ Y+PGCPPRPEA + Sbjct: 71 ALQRAYAAMPGPKLVFAIGSCACGGGIWHDSYAVHGPVEKLIPVNYYVPGCPPRPEAIIW 130 Query: 168 ALMLLQESIGKERRPLSW 185 + + + K+ P+ + Sbjct: 131 GVAVAAGLVDKKTAPVEF 148 >UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=cellular organisms RepID=A9BJL8_PETMO Length = 195 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 2/150 (1%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 E + N + + N R S+W ++ C VE+ + TA D+ R G + A+PR Sbjct: 14 EEDLNDTITFWEKIKNIFRGKSLWMLHYCTGCGAVELPPTMTARFDMERLGMGPM-ATPR 72 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIP 150 QAD++++ G K + Y+QM+ PK+++ G+C +GG+ YD Y+V+ +D ++P Sbjct: 73 QADVLLITGYLSVKTLRRVIYTYEQMMTPKYLVGFGSCTINGGIYYDSYAVINRLDYYLP 132 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VD+Y+ GC PRPEA M L+ I K Sbjct: 133 VDLYVAGCMPRPEAIMNTFKTLENMITKGE 162 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 169 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +G+ + G + C ++ T V+D++RFG + + ASPR AD +V+ G M Sbjct: 119 FGKSVYLREVCAGGCNACDADINVLNTPVYDLSRFGIKFV-ASPRHADGLVITGPVTKNM 177 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 + + YD PK+VI++G CA SGG++ + VV GVDK +PVD+YIPGCPP P Sbjct: 178 ELALMKTYDATPSPKFVIAVGTCAISGGIFRENEEVVGGVDKILPVDLYIPGCPPHPFTN 237 Query: 166 MQALMLL 172 + A + Sbjct: 238 LYAFVKF 244 >UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=54 Tax=cellular organisms RepID=B2A054_OPITP Length = 338 Score = 168 bits (425), Expect = 1e-40, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 5/144 (3%) Query: 49 GRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTK 105 G + S W ++ + C +E + T ++DV R G + +P+ AD+ +V G + Sbjct: 3 GLRKSPWIIHYDASSCNGCDIETLACLTPLYDVERLGV-INTGNPKHADIFLVTGAVNEQ 61 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 VI+ +Y Q+ EPK V+++G CA+SGG++ D Y++ GVD+ IPVDVY+PGC RPEA Sbjct: 62 SKEVIRNIYHQLPEPKVVVAIGVCASSGGIFRDCYNIAGGVDRVIPVDVYVPGCAARPEA 121 Query: 165 YMQALMLLQESIGKERRPLSWVVG 188 + ++ + +++ +S + Sbjct: 122 IIDGVVQALGVLERKQSEMSALAN 145 >UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA3_9ACTN Length = 228 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 90/156 (57%), Gaps = 5/156 (3%) Query: 51 KNSIWPYNF-GLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 S W ++ G SC C +E++ S ++D+ RFG + +P+ AD+ +V G+ + Sbjct: 5 SKSPWLIHYDGSSCNGCDIEVLDSMMPLYDIERFGI-INTGNPKHADIFLVTGSVNAQNI 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 V++ +YDQMLEPK V++ G CA +GG++ D Y+V+ GVDK IPVDVY PGC RPE + Sbjct: 64 EVVRHIYDQMLEPKVVVACGICACTGGVFRDCYNVIGGVDKAIPVDVYAPGCAVRPETII 123 Query: 167 QALMLLQESIGKERRPLSWVVGDQGVYRANMQSERE 202 A++ E + ++ + ++ R + + Sbjct: 124 DAVLKAVEILDEKAKLMAAGKDPATAPRKGLLPRKG 159 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 163 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 3/137 (2%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 + WG K S+WP + +CC VE+ ++ +D R G+ + RQ +L++V G Sbjct: 2 LKEWGTKWSLWPVHLVTACCGVELAHAYACGYDAERIGS-LNYGICRQTNLIIVEGAITR 60 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 KMA V++ ++QM PK+VI MGAC GG++ + Y +V+ D VDV++PGCPP PE Sbjct: 61 KMARVLRITWEQMPNPKFVIVMGACGIKGGLFKNSYHMVRPWDVVP-VDVFVPGCPPTPE 119 Query: 164 AYMQALMLLQESIGKER 180 A ++ ++ LQ+ I + Sbjct: 120 ALIRGIVALQKKIEGKE 136 >UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japonica Group RepID=C7IWD0_ORYSJ Length = 379 Score = 163 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 3/102 (2%) Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 + D R+G V R+SPRQADL++ AGT KMAP + RLY+QM EPK+VI+MGAC + Sbjct: 150 GSRFDFDRYGL-VPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTIT 208 Query: 133 GGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 GGM+ D YS V+GVDK IPVDVY+PGCPP+PEA + AL L Sbjct: 209 GGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKL 250 >UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarchaeota RepID=Y516_METJA Length = 148 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 6/140 (4%) Query: 50 RKNSIWPY---NFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 RK SI G + C +E+V +D+ ++G + +PR+AD+++V G + Sbjct: 7 RKRSIHVCVVNTGGCNGCDIEIVACLAPRYDIEQYGI-YVHNNPREADVLLVTGPVTLQW 65 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 A ++ +Y++ EPK V+++GACA SGG++ VV GVDK IPVD IPGCPPRP + Sbjct: 66 AERLKEIYEKTPEPKIVVAVGACALSGGIFKEGHVVGGVDKVIPVDAKIPGCPPRPSEII 125 Query: 167 QALMLLQES--IGKERRPLS 184 + ++ + +E+R + Sbjct: 126 ETILKVAPKAIAMREKRLKN 145 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 162 bits (411), Expect = 7e-39, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 3/132 (2%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +GR + G + C + T D+ RFG + + ASPR AD + V G M Sbjct: 113 FGRSLKFREVSAGGCNACEADTNVLSTIGWDLGRFGIQFV-ASPRHADGLWVTGPVTEHM 171 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 A + Y+ + +PK V++ GACA +GG Y D V GVD +PVD+YIPGCPP P Sbjct: 172 AKALLTTYEAIPDPKIVVACGACAINGGPYIDTPQVCNGVDSIVPVDLYIPGCPPHPATI 231 Query: 166 MQALMLLQESIG 177 + L+ + I Sbjct: 232 LDGLLRILNKIK 243 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 3/135 (2%) Query: 47 NWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTK 105 + R + + G + C +E+ + +D++R+G + ASPR AD +VV G Sbjct: 109 KFKRSLVLRSVDTGSCNGCMMEVSNTQNTYYDLSRYGIK-FAASPRHADGIVVTGPVTLN 167 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 M + + YD + +PK VI++G+CA SGG++ D YSV + +++ + V++ IPGCPP P+A Sbjct: 168 MKEALIKTYDAISDPKIVIAVGSCAYSGGIFKDGYSVCEDLNEILKVNLVIPGCPPSPQA 227 Query: 165 YMQALMLLQESIGKE 179 + ++ + + +E Sbjct: 228 ILYGMLKIINKLDEE 242 >UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBM2_9ACTN Length = 195 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 5/125 (4%) Query: 51 KNSIWPYNF-GLSC--CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 S W ++ G SC C +E++ S T + D RFG V +P+ AD+ +V G+ + Sbjct: 6 SRSPWVIHYDGSSCNGCDIEVLASLTPLFDAERFGV-VNTGNPKHADIFLVTGSVNAQNL 64 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 PV++++Y+QMLEPK V++ G CA SGG++ D Y+V+ GVD+ IPVDVY PGC RPE + Sbjct: 65 PVVRQIYNQMLEPKCVVACGICACSGGVFRDAYNVIGGVDRAIPVDVYAPGCAIRPETVI 124 Query: 167 QALML 171 A++ Sbjct: 125 DAIVE 129 >UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=Selaginella uncinata RepID=Q2WGH7_SELUN Length = 215 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 87/148 (58%), Gaps = 3/148 (2%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 ++ ND N R S P +G SCC+ E + D R G+ V R+SPRQA Sbjct: 39 PDSIIPTTPNDFTNRARLPSSRPPPYGTSCCFTEFAPLIGSRSDSDRHGS-VPRSSPRQA 97 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVDKFIPV 151 DL++ AGT TKMAP + R Y+Q EPK I+MGAC +GGM D +S V+GVDK IP Sbjct: 98 DLIITAGTATTKMAPSLVRSYEQTPEPKHAIAMGACTVTGGMLSTDPHSTVRGVDKSIPA 157 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKE 179 D Y PG PP+PEA + A + +E + +E Sbjct: 158 DTYPPGRPPKPEAIVDATIKPREKVSRE 185 >UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T1_UNCMA Length = 135 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 7/131 (5%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S W Y+ G C +E+V S +D+ R G ++ SPR AD+++V G Sbjct: 5 KRSPWVYHAHAGGCVGCDIELVASMGPRYDLERLGVRLV-PSPRYADVLLVTGPVPLHTK 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY---DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 P ++R+Y Q EPK VI++GAC S G++ + YS+ VDK IPVDV IPGCPP+PEA Sbjct: 64 PFLERVYAQTPEPKRVIAIGACGCSCGVFIDDENYSIAGPVDKIIPVDVKIPGCPPKPEA 123 Query: 165 YMQALMLLQES 175 M+ ++ + Sbjct: 124 IMEGIIKVLRM 134 >UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W241_DESAS Length = 236 Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 5/150 (3%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARF 81 ++T P E K+ + + R I + G + C E+ + V+D+ ++ Sbjct: 84 PVLTAPASAEDLGRALREKIKKICH--RSLHIRYVDAGACNGCDFEINSMTNPVYDIQQY 141 Query: 82 GAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYS 140 G + + ASPR AD+++V G + + + Y+ P V+++GACA GG++ + Y+ Sbjct: 142 GVDFV-ASPRHADMLLVTGVVTRNLEIALHKTYEACPRPALVVAVGACACGGGVFKEAYA 200 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALM 170 GVDKF+PVDVY+PGCPP P ++ ++ Sbjct: 201 SGGGVDKFLPVDVYVPGCPPTPAQIIKGIL 230 >UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Aquificales RepID=B2V8R1_SULSY Length = 173 Score = 159 bits (402), Expect = 7e-38, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 6/160 (3%) Query: 21 KQEIVTDPLEQEVNKNVFMGK-LNDMVN--WGRKNSIWPYNFG-LSCCYVEMVTSFTAVH 76 K+ I + ++ +GK L + ++ + +I + G + C E+ + Sbjct: 10 KEGIKAEEIKIRDENVEILGKQLKEKIDKYFQGSFAIREVDSGSCNACEYEISALSNPYY 69 Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG + + ASP+ AD +++ G M + + Y+ + PK++I++G CA GG + Sbjct: 70 DIERFGVKFV-ASPKHADAIMITGCLTRNMYEAVMKAYENVPNPKFIIAVGDCALDGGTF 128 Query: 137 -DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 Y+V+ G+ +P+D++I GCPP P + L++L Sbjct: 129 KGSYAVMDGIKDKLPIDIWIKGCPPEPIDIISGLLILLNK 168 >UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X3_IGNH4 Length = 207 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 17/190 (8%) Query: 40 GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 + + + W R+NS+W + G+ CC +EM+ + A HD R G RA+PRQ D++++ Sbjct: 18 APVKEALKWSRRNSLWLLHLGIMCCAIEMMQAAFAFHDFERLGVLA-RATPRQVDVILIN 76 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--------DIYSVVQGVDKFIPV 151 G K+A ++RL+ Q P++VI MG CA +GG + I+ V++ + + Sbjct: 77 GPVNRKLAERLRRLFMQTPGPRFVIVMGECAINGGPWWQSDYVLDGIHEVIESLPEEYRK 136 Query: 152 DVYI---PGCPPRPEAYMQALMLLQESIGKE---RRPLS--WVVGDQGVYRANMQSERER 203 DV++ GCPPRPE ++A++ ++E I + R PL+ + ++G + + Sbjct: 137 DVHVVNLAGCPPRPEGLLRAILKMEELINEGDLARAPLTRYRLHDEEGSDKKVVDPMLRY 196 Query: 204 KRGERIAVTN 213 R A Sbjct: 197 AYNNRKAGEK 206 >UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=C5CEV5_KOSOT Length = 137 Score = 158 bits (399), Expect = 2e-37, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 5/130 (3%) Query: 51 KNSIWPYNFG---LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S+W ++ + C +E++ T +D+ RFG +++ S R AD+++V G K++ Sbjct: 9 KRSLWVFHVSASPCNNCDIEILDMLTPRYDLERFGIKLV-GSVRHADVLLVTGMGGCKVS 67 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 + R+Y+Q +P +VI++G C +G + + Y+ +D+F+PVD+YIPGCPP+PE + Sbjct: 68 ERVIRIYNQAPKPVFVIAVGTCPVAGATFKESYTRCGPLDRFVPVDLYIPGCPPKPETMI 127 Query: 167 QALMLLQESI 176 L L + Sbjct: 128 AGLSELLGRL 137 >UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit n=4 Tax=Archaea RepID=B6YWP9_THEON Length = 191 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 21/175 (12%) Query: 51 KNSIWPYNFG---LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 KNS+W ++ + C +E++ F +DV R G +++ SPR AD + G + Sbjct: 3 KNSLWVFHLNSGSCNGCDIEILNIFAPRNDVERLGIKLV-GSPRHADAIAFTGPITRECL 61 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFI-----------PVDVYI 155 P + + EPK V+++GACA GG+ YD YSV+ GV + P V+I Sbjct: 62 PKVIDALKAVPEPKVVLAIGACACGGGIWYDTYSVIGGVKELYRILKEEYNMEPPATVFI 121 Query: 156 PGCPPRPEAYMQALMLLQESIGKERRPLSWV-----VGDQGVYRANMQSERERKR 205 PGCPP+PEA + + + + +++ +V V ++ + A + SE E+ R Sbjct: 122 PGCPPKPEAIIYGVAVASGMLESKQKKTVYVEPEESVANEKLMIAELISETEKTR 176 >UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=cellular organisms RepID=A7I7C9_METB6 Length = 172 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 10/169 (5%) Query: 12 GENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGL-SCCYVEMVT 70 G+ PL ++ + + +E+ + + +GR +I + G + +E+ Sbjct: 10 GKKVTGPLPVRDEELERIGREIRREIN-------ARFGRSLAIRELDAGSDNAAEIEINN 62 Query: 71 SFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACA 130 A +DV RFG + ASPR AD+++V G MA Q+ YD M PK+V+++G A Sbjct: 63 LSNAYYDVERFGISFV-ASPRHADVLLVTGAITCNMAIAAQKTYDAMPSPKFVVAVGDDA 121 Query: 131 NSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 GG+Y Y+V+ G D PVD+ IPG PP P + L+ L S GK Sbjct: 122 CDGGIYKGTYAVLGGADAIFPVDLKIPGNPPAPIQILTGLLALMRSAGK 170 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%) Query: 50 RKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 R + + G + C E+ +++ R G SPR ADL++V G M Sbjct: 126 RSLHVRHVDAGSCNGCESELQALNNPFYNLHRLGI-FFTPSPRFADLLLVTGPVTRAMLE 184 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQA 168 ++R ++ M P+WV++ G CA SGG+ + G+++ +PVD+Y+PGCPP P A ++A Sbjct: 185 PLRRTWEAMPAPRWVMASGTCAVSGGIAPGGPCLSGLEEALPVDLYLPGCPPNPAAIIEA 244 Query: 169 LMLLQESIGKERR 181 L++ + R Sbjct: 245 LLMFLGRRAQRVR 257 >UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Proteobacteria RepID=Q12F15_POLSJ Length = 181 Score = 156 bits (394), Expect = 6e-37, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 7/151 (4%) Query: 43 NDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + ++ G+ +I + G + C +E+ +++ G + + ASPR AD+++V G Sbjct: 35 DILLILGQALTIRAVDAGSCNGCELEIHALNNPYYNIEGLGIKFV-ASPRHADMLLVTGP 93 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 M ++R YD EPK V+++G C +GG++ D Y+ V IPVDV +PGCPP Sbjct: 94 VSRHMDEALRRTYDATPEPKLVVAVGDCGCTGGIFGDSYASCGRVANVIPVDVTVPGCPP 153 Query: 161 RPEAYMQALMLLQESIGKERRPLSWVVGDQG 191 P ++ ++ ++RRP + G Sbjct: 154 PPIEILRGILT----AVRQRRPGTAGDNPAG 180 >UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxidoreductase Fe-S protein 7 n=1 Tax=Taeniopygia guttata RepID=UPI000194DF39 Length = 183 Score = 154 bits (390), Expect = 2e-36, Method: Composition-based stats. Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 39/148 (26%) Query: 38 FMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMV 97 + KL+D+VNW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQAD+M+ Sbjct: 72 VIAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQADVMI 130 Query: 98 VAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPG 157 VAGT KMAP +++ +P G Sbjct: 131 VAGTLTNKMAPALRK------KP---------PCRG-----------------------R 152 Query: 158 CPPRPEAYMQALMLLQESIGKERRPLSW 185 CPP EA + ++ LQ I +E+R W Sbjct: 153 CPPTAEALLYGILQLQRKIKREKRMQIW 180 >UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5A0_DESK1 Length = 337 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 11/183 (6%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 L + W S+W ++ +C VE A D R+G + SPRQ+DL + G Sbjct: 2 LERIARWAYARSLWMIHYCSACGAVEFPPLVMAPLDWERYGY-MPTPSPRQSDLYIGMGY 60 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 K ++ +Y QM EPK V++ C ++GG Y D Y+ + +D FI V+ ++PGC P Sbjct: 61 LTKKTVKLVLNMYRQMPEPKLVLAGCNCTSTGGPYWDSYATYKRLDDFIEVEGWVPGCMP 120 Query: 161 RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERER-------KRGERIAVTN 213 P+ Y+ + +++ +GK RPL+ V SE E + E+I + Sbjct: 121 MPDDYLSMIEYVRKDLGK--RPLNAYVSKIKPDAFKKISEWEELEKQWRKEYEEKIKEDS 178 Query: 214 LRT 216 + Sbjct: 179 SKP 181 >UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY8_9DEIN Length = 290 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 11/151 (7%) Query: 65 YVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVI 124 E+ + HD++RFG V+ ASPR AD ++V G M + R Y EPK V+ Sbjct: 142 DTEVALAGNPFHDMSRFGFSVV-ASPRHADALLVTGPVSQNMREALWRTYQATPEPKGVV 200 Query: 125 SMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK----- 178 ++G A G ++ + +VV GVD+ +PVDVY+PG P RP + + L+LL + Sbjct: 201 AVGNEAIGGEIFAESAAVVGGVDQVVPVDVYVPGSPARPASILHGLLLLSGQTQQVLVGG 260 Query: 179 ---ERRPLSWVVGDQGVYRANMQSERERKRG 206 E R V + GV ++ ++ER + G Sbjct: 261 RLHEERTQV-VSSEAGVEASSRRAERGEEHG 290 >UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Epsilonproteobacteria RepID=A6Q6W5_SULNB Length = 168 Score = 152 bits (384), Expect = 7e-36, Method: Composition-based stats. Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 10/152 (6%) Query: 27 DPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEV 85 + +++E+ +NV + +I + G + C E +D+ R G Sbjct: 25 EAIKREIKENV-------KKKFAGSLAIRMVDSGSCNACEAECNALSNPYYDLERLGI-Y 76 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQG 144 ASPR AD+M++ G M P + Y Q+ EPKWVI++GAC ++ ++V Sbjct: 77 FVASPRHADVMLLNGLMTFNMTPHVLDAYKQIPEPKWVITLGACPVMEAPFEKTFAVKAP 136 Query: 145 VDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 +PV +IPGCPP P ++ L+ + I Sbjct: 137 AADHLPVAHHIPGCPPEPLEIIRGLLEFLKKI 168 >UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteria RepID=Q2T5T7_BURTA Length = 174 Score = 152 bits (384), Expect = 8e-36, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 3/135 (2%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 GR I + G + C +E+ +++ G + + ASPR AD++++ G M Sbjct: 41 GRALCIRAIDAGSCNGCELELNALGNPYYNIEGLGIKFV-ASPRHADMLLITGPLTLNMR 99 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 ++ YD PK V++ G CA +GG++ Y+V V+ +PVDV I GCPPRP + Sbjct: 100 DAVRLAYDATPAPKLVVAAGDCACTGGVFAGSYAVCGPVETLVPVDVAIAGCPPRPIDLL 159 Query: 167 QALMLLQESIGKERR 181 + + E + R Sbjct: 160 RGIRGALERVRTGPR 174 >UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=3 Tax=cellular organisms RepID=B6YT72_THEON Length = 266 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 25/174 (14%) Query: 52 NSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 S+W ++ + C +E++ T +D R G +++ SPR AD ++V+G + Sbjct: 5 KSVWVFHVDSGSCNGCDIEILDVLTPYYDAERLGIKLV-PSPRHADALLVSGPLTRQTYY 63 Query: 109 VIQRLYDQM-LEPKWVISMGACANSGGMY-DIYSVV-----QGVDKF----IPV------ 151 ++ Y+ M +P+ V+++G CA+SGG++ + Y + +G D+ I V Sbjct: 64 AVKAAYEAMPPKPRIVVAIGTCASSGGIFYNGYPIYNPNPERGSDRLRTGGIEVLLAEYG 123 Query: 152 ---DVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD-QGVYRANMQSER 201 D+YIPGCPP PE + L L K+ + + + + V ER Sbjct: 124 KKPDMYIPGCPPSPEEILYGLAQLLGLKEKKMKGEYYYADEIEFVLPERPIEER 177 >UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobacteria RepID=C6ANV6_AGGAN Length = 258 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 15/203 (7%) Query: 14 NDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSF 72 N + P+ I T +++N+ K + N R ++ + G + C +E+ ++ Sbjct: 2 NTQIPMPVNGISTPF---SIDENIAKMKQALLKNIQRSAYVYRVDCGGCNGCEIEIFSTI 58 Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 T V D RFG +V+ ASPR AD+++ G+ M R Y +PK I+ GAC Sbjct: 59 TPVFDAERFGIKVV-ASPRHADILLFTGSVTRAMRTPAMRAYQAAPDPKICIAYGACGCG 117 Query: 133 GGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALML----LQESIGKERRPLSWVV 187 GG++ D+Y V G D+ +PVDVYIPGCPP P A + + L + + ++ Sbjct: 118 GGIFHDLYCVWGGSDQIVPVDVYIPGCPPTPAATIYGFAMALGLLDQKLKGKQEKADPNA 177 Query: 188 GDQGVYRA-----NMQSERERKR 205 + + + ERE +R Sbjct: 178 EAKLRFPTIPLDLRISLEREARR 200 >UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST9_DESHY Length = 155 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%) Query: 51 KNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPV 109 I + G + C EM ++D+ RFG + + ASPR AD+++ G T + Sbjct: 32 SWHIRHLDCGSCNGCDWEMSALLNPIYDLQRFGLDFV-ASPRHADILMCTGPMSTHLIQA 90 Query: 110 IQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQA 168 Y+ PK +I++G CA GGM+ + Y+ GV + +PVD+ IPGCPP P+ ++ Sbjct: 91 ALATYEGTPNPKRIIAVGDCALDGGMFKEAYAAHNGVGEALPVDIKIPGCPPSPDELLKV 150 Query: 169 LMLLQ 173 L+ L+ Sbjct: 151 LLQLK 155 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 145 bits (367), Expect = 8e-34, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 8/148 (5%) Query: 43 NDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + +GR I + G + C E+ +++ R G SPR ADL++V G Sbjct: 129 KSLAGFGRSLHIRHVDAGSCNGCESEISALLNPFYNLHRLGV-FFTPSPRFADLLLVTGP 187 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISM-GACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP 160 M + R ++ M EP+WV+++ G Y+ QG+D +PVD+++PGCPP Sbjct: 188 VTEVMREPLLRTFEAMPEPRWVMALGTCATGGGTNGGGYACHQGLDGILPVDIWLPGCPP 247 Query: 161 RPEAYMQALMLLQESIGKERRPLSWVVG 188 P A ++AL++L + RRP G Sbjct: 248 NPAAIIEALLVLLD-----RRPQQVHGG 270 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 3/127 (2%) Query: 50 RKNSIWPYNF-GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 R + + G + C + T V D+ RFG + + ASPR AD +V+ G M Sbjct: 129 RSLKLRQVSAAGCNACEADCNVLGTLVFDLPRFGIDFV-ASPRHADGIVLTGPVSENMRL 187 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 Y+ EP+ V+++GACA SGG++ D G+ +PVD+++PGCPP P + Sbjct: 188 AAIDTYNATPEPRLVVAVGACAISGGLFRDAPQCNNGIADILPVDLFVPGCPPNPWTILD 247 Query: 168 ALMLLQE 174 L++L+E Sbjct: 248 GLLMLRE 254 >UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarchaeota RepID=Y1363_METJA Length = 151 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 10/134 (7%) Query: 56 PYNFGLSCCYVEM-VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLY 114 Y G + C +E+ F+ +D ++ L +PR+AD++VV G +A ++++Y Sbjct: 19 VYTGGCNACDIEVVNAIFSPFYDAEQYNV-FLTFNPREADILVVTGCVTKVVAESLRKIY 77 Query: 115 DQMLEPKWVISMGACANSGGMYD--------IYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 +++ EPK V+++GACA GG+Y V V+ IPVDV +PGC PRPE + Sbjct: 78 EKIPEPKAVVAVGACALMGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCAPRPEDII 137 Query: 167 QALMLLQESIGKER 180 ++ + + + Sbjct: 138 AGIVKALPKVIEGK 151 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 5/128 (3%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +GR + + G S C +E+ D+ R+G +++ ASPR AD +V++G M Sbjct: 124 FGRSLKLRSVSAGGCSGCEMEINALSNVNFDLGRYGIDIV-ASPRHADALVLSGPITRNM 182 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVV--QGVDKFIPVDVYIPGCPPRPEA 164 A +Q +D + EPK VI++GACA SGG++ + Q +D F P +Y+PGCP P Sbjct: 183 AQALQICWDAIPEPKLVIAVGACAISGGVFADSDALDRQFLDNFKPA-LYVPGCPAHPLT 241 Query: 165 YMQALMLL 172 ++ +M L Sbjct: 242 FISGIMDL 249 >UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=Sulfolobus RepID=D2PJN5_SULIS Length = 201 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 9/129 (6%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 + R ++P + G C +E+ + +D+ RF +PR AD +VV G KM Sbjct: 81 FKRSFYLYPIDSGTCGGCNMELKLISSPEYDMTRFSI-FFTNTPRHADALVVMGVMTEKM 139 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 V+++ Y+ M EPK VI +GACA SGG+ + +GV + V I GCPP P + Sbjct: 140 KEVLKKAYEAMPEPKVVILLGACAISGGI-----IGEGVP--LEAVVEISGCPPNPFTIL 192 Query: 167 QALMLLQES 175 +ALM ++ Sbjct: 193 EALMKVKGK 201 >UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Euryarchaeota RepID=C5U7Y6_9EURY Length = 154 Score = 138 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 10/125 (8%) Query: 56 PYNFGLSCCYVE-MVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLY 114 Y G + C +E + F+ +D ++ L +PR+ D+++V+G + ++++Y Sbjct: 23 VYTGGCNGCDIEAVNAVFSPYYDAEQYNV-FLTFNPRETDILIVSGCVTKFVKESLRKIY 81 Query: 115 DQMLEPKWVISMGACANSGGMYD--------IYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 +++ EPK V+++G+CA +GG+Y V V+ IPVDV +PGC PRPE + Sbjct: 82 EKIPEPKAVVAIGSCALTGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCAPRPEDII 141 Query: 167 QALML 171 ++ Sbjct: 142 SGIVK 146 >UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H7B9_CHAGB Length = 189 Score = 138 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 47/182 (25%) Query: 2 DYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVN--KNVFMGKLNDMVNWGRKNSIWPYNF 59 Y+ + P R P + + E+ N + L+ ++NW R+ S+WP +F Sbjct: 45 RYSTEQTSP-ARQPRIPPPVRPTLAVSTEKRPNSVTEYALSTLDGLINWARQGSLWPMSF 103 Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 GL+CC +EM+ +D R G + RASPRQ+D+M+VAG Sbjct: 104 GLACCAIEMMHLSMPRYDNDRQGI-IFRASPRQSDVMIVAG------------------- 143 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 GVD+ +PVD+Y+PGCPP EA + LQ+ + Sbjct: 144 ------------------------GVDRIVPVDIYVPGCPPTAEALQYGIFQLQKKMAAG 179 Query: 180 RR 181 +R Sbjct: 180 QR 181 >UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL1_THEPD Length = 245 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 7/137 (5%) Query: 50 RKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 R + + G + C +E+ + T DV R G +++ SPR AD+++V G + P Sbjct: 15 RSVYLLRVDSGSCNGCDIEVFDALTPYFDVERLGVKLVL-SPRMADVILVTGPVTRQFLP 73 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 V++ Y+ +P V++ GACA GG+ YD Y GVDK IPVDVYIPGCPPRP A + Sbjct: 74 VLKATYEAAPKPCVVVACGACACGGGIWYDTYGTAGGVDKVIPVDVYIPGCPPRPHAILH 133 Query: 168 ALML----LQESIGKER 180 + + L++ + + Sbjct: 134 GVAVALDILEQKVKRSE 150 >UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU9_ACEP3 Length = 165 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 8/128 (6%) Query: 55 WPYNF------GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 WP G C +E+ A +D+ G + SPR AD++++ G MAP Sbjct: 26 WPLLLFHVDTGGCGGCGMELQALRYAPYDMEGAGFGFVT-SPRNADVLLITGALTRAMAP 84 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 V++ + M PK +I++G+CA GGM+ + Y+V+ G+++ + +D+ IPGCPP P+ + Sbjct: 85 VLEAAWQAMPTPKGLIAVGSCALDGGMFPENYTVLGGLERRVSIDLKIPGCPPAPQDVLN 144 Query: 168 ALMLLQES 175 L L Sbjct: 145 GLCSLFGK 152 >UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTX0_THEON Length = 273 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 33/165 (20%) Query: 52 NSIWPYNFG---LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 SIW ++ + C +E++ T +DV RFG +++ SPR A ++V+G + Sbjct: 8 RSIWVFHLNTGSCNGCDIEIIDVLTPFYDVERFGIKLV-GSPRHAHALLVSGPLTRQAYY 66 Query: 109 VIQRLYDQML-EPKWVISMGACANSGGMYDI----------------YSVVQGVDKFI-- 149 + M EP+ ++++G C SGG++ Y G+ + I Sbjct: 67 GAKETIKAMPPEPRVIVAIGTCTCSGGIFYNGYPVYRRPESGREGSEYPRRGGIAELIAD 126 Query: 150 ---------PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 PV +YIPGCPPRPE + + L + K+ + Sbjct: 127 LRDEGEKVGPV-IYIPGCPPRPEEIIYGIAQLVGLVEKKLSYQEY 170 >UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN5_METS5 Length = 203 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 9/127 (7%) Query: 46 VNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 V + R ++P + G C +E+ + +D+ RFG +P+ AD +++ G Sbjct: 78 VTFKRSFYLYPLDAGSCGGCNLELRLISSPQYDMTRFGI-FFTNTPKHADALLIMGNLGK 136 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 +M VI+R YD + PK VI +G CA SGG+ I ++G DV +PGCPP P + Sbjct: 137 RMEEVIRRAYDVIPSPKLVILLGTCAISGGVTGIPPDIRG-------DVIVPGCPPTPAS 189 Query: 165 YMQALML 171 + AL+ Sbjct: 190 ILDALIK 196 >UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermoplasmatales RepID=Q978D5_THEVO Length = 222 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 9/163 (5%) Query: 8 IDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYV 66 I P+G + + + D + + K D R ++P + G C + Sbjct: 47 ITPDGWVMEKCIFCRRCLPDYKPTGDQRIFTIKKTEDTFR--RSFHVFPIDSGACGACNM 104 Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 E ++ F+ +D R G + +PR AD ++V G M + R Y+ M EPK VI+M Sbjct: 105 EFLSIFSPQYDANRLGI-FMVNTPRYADALIVMGVMTPGMKEALDRAYEAMPEPKLVIAM 163 Query: 127 GACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 GACA +GG+ +D+ +V I GCPP P + AL Sbjct: 164 GACAVTGGIMGE----NPLDRE-KYNVEIAGCPPSPYTLIAAL 201 >UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Actinomycetales RepID=A1SQ82_NOCSJ Length = 162 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Query: 54 IWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQR 112 I + G + C +E+ +F V+D R+GA ++ ASPR AD+++V G M ++R Sbjct: 40 IRHVDAGSCNGCEIEVGGAFGPVYDAERYGARLV-ASPRHADVVLVTGVVTHNMLEPLRR 98 Query: 113 LYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALML 171 + P+ V+++G CA + G + Y V V + VD+ +PGCPP P A + AL Sbjct: 99 TVEATPRPRLVLAVGDCARNCGAFKGGYGVAGAVHDAVDVDLEVPGCPPEPAAIVDALRR 158 Query: 172 L 172 + Sbjct: 159 V 159 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 3/120 (2%) Query: 48 WGRKNSIWPYNFGLSCCY-VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +GR + + G S ++ T D+ RFG + + ASPR AD +VV G M Sbjct: 150 FGRSLRLRQVSAGGSGAEEADLNVLGTIGWDLGRFGIQFV-ASPRHADGLVVTGPVSKGM 208 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ-GVDKFIPVDVYIPGCPPRPEAY 165 +++ ++ M PK VI++GA A SGG++ + V+ GVD +PVD+YIPG PP P Sbjct: 209 ELALRKTWEAMPAPKIVIAVGAEAISGGVFAGHPQVRNGVDAIVPVDLYIPGWPPHPLTI 268 >UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospirillum RepID=A3ETD3_9BACT Length = 169 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 G SI + G + C +E+ + + R G + ASPR ADL++V G +M Sbjct: 33 GGSLSIRHVDAGSCNACELELHAMNGSYYAPERDGIRFV-ASPRHADLLLVTGPVSCQME 91 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ-GVDKFIPVDVYIPGCPPRPEAYM 166 + ++ M PK V+++G CA GG++ V+ GVD P +PGCPP P + Sbjct: 92 QPLLDTHEAMASPKTVLAVGDCACQGGVFRGSPAVRNGVDGLFPEARKVPGCPPSPSDIL 151 Query: 167 QALMLLQE 174 +AL L Sbjct: 152 RALRGLSR 159 >UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZJ00_GLUDA Length = 166 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 12/154 (7%) Query: 49 GRKNSIWPY-NFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 R +++ G C +E+ A + + G + A+PR A++++V G MA Sbjct: 22 ARPLAVFHVETGGCEGCAMEVAALDGAAYGLPATGIAFV-ATPRLAEVLLVTGPLTRAMA 80 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 PV++ + M EP+ ++++GACA GG + + Y+V+ G++ +D+ +PGCPP P A + Sbjct: 81 PVLEAAWHAMPEPRALVAVGACAIDGGPFPENYAVLGGLEGRATLDMTVPGCPPSPAAIL 140 Query: 167 QALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 L + E V G GV + + S Sbjct: 141 AGLARVLER---------DVAGQAGVAESGLSSS 165 >UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICA0_9EURY Length = 179 Score = 130 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 13/132 (9%) Query: 42 LNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 + + + + I+ + G S C E+ + +D+ R G PR AD+++V G Sbjct: 54 VRRKIPFNKSVHIFVLDVGSCSSCNREISLLNSPQYDLHRLGF-FFTPVPRHADILLVIG 112 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP 160 KM PV++ Y+QM EPK V++ GACAN + ++K I VD + GCPP Sbjct: 113 EPTEKMIPVLKEAYEQMPEPKIVMTAGACAN-----------EKIEKIIKVDARVSGCPP 161 Query: 161 RPEAYMQALMLL 172 +P A ++AL++L Sbjct: 162 QPIAILKALLML 173 >UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 Tax=Thermococcus RepID=C5A2Q7_THEGJ Length = 283 Score = 129 bits (324), Expect = 8e-29, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 33/183 (18%) Query: 50 RKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 R S++ ++ + C +E+ T +D R G L ASPR A M G + Sbjct: 2 RLRSLYVFHLDTGACNGCEIELFDILTPYYDAERLGVR-LAASPRHAHAMAATGPLTRQA 60 Query: 107 APVIQRLYDQML-EPKWVISMGACANSGGMY----------------DIYSVVQGVDKFI 149 + M +P+ ++++G CA SGG++ Y G+ + + Sbjct: 61 YYAAKEAIKAMPPKPRIIVAIGTCACSGGIFYNGYPIYRRPESGREGQEYPRRGGIFELV 120 Query: 150 -----------PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 PV VYIPGCPPRPE + + L + K+ + + Sbjct: 121 QDLRDEGEYVGPV-VYIPGCPPRPEEILYGVALALGLVEKQVKGEYYTEEVGFELPEYPI 179 Query: 199 SER 201 ER Sbjct: 180 EER 182 >UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=Gallus gallus RepID=UPI0000E81815 Length = 187 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 48/149 (32%) Query: 38 FMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMV 97 + KL+D++NW R+ S+WP C++ Sbjct: 83 IVTKLDDLINWARRTSLWPSMLAQQNCHLH------------------------------ 112 Query: 98 VAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIP 156 P + L E CAN GG Y YSVV+G D+ +PVD+Y+P Sbjct: 113 ----------PALLGLSAAEPE-------DGCANGGGYYHYSYSVVRGCDRIVPVDIYVP 155 Query: 157 GCPPRPEAYMQALMLLQESIGKERRPLSW 185 GCPP EA + ++ LQ+ I +ER+ W Sbjct: 156 GCPPTAEALLYGILQLQKKIKRERKLQIW 184 >UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW77_ACICJ Length = 164 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 GR ++ + G C +E+ +A G ++ R AD+++V G +A Sbjct: 23 GRSLAVRHVDAGSCGGCEIEIAACRRLRGGMAAHGIAMVE-DLRAADILLVTGVATRNLA 81 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 +++ M P++V++ G CA GG++ +V+ GV IPVD+ I GCPP P + Sbjct: 82 EAVRKSLAGMAPPRFVVAAGDCALDGGVFKGVPAVLGGVQAVIPVDLLIAGCPPAPRQIL 141 Query: 167 QALMLLQESIGKERR 181 L+ L E+ +E R Sbjct: 142 AGLVALVEANAREPR 156 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%) Query: 61 LSCCYVEMVTSFT-AVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 + C VE+ + DV + G P +AD++++ G + RLY + E Sbjct: 23 CNGCDVELAVTAAVDEFDVEQLGCRY-TEEPHEADILLITGPLTVRARNEALRLYAEAPE 81 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 K +++G C SGG++ D Y+V V +++PVD+ +PGCPPRP+A + + ++ Sbjct: 82 TKVTVAVGVCPVSGGVFRDSYAVDGPVQRYLPVDLNVPGCPPRPQALLAGIAQARDLWRA 141 Query: 179 ERRPLSWVVGDQGVYRANMQSERERKRGERIAVT 212 + + V + + + ++ R++ Sbjct: 142 RSKGVDAVFAAPPLAKPADEPAQQFPIRGRMSFD 175 >UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC3_9PROT Length = 140 Score = 119 bits (298), Expect = 7e-26, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Query: 61 LSCCYVEMVTS-FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 + C VE+ S ++ D+ + G E + S AD+ ++ G + P ++ + + Sbjct: 17 CNGCDVEIAASVMSSRFDLQKLGCEYIETS-EDADIFMITGPVTARSLPFLKEVIKNHKK 75 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 P VIS+G C+ + G++ D Y ++ VD ++ VDV + GCPPRP+A ++ + + + + Sbjct: 76 PYVVISLGTCSVTCGIFRDSYPILGPVDSYVNVDVNVAGCPPRPQAILEGVKTAIDILKR 135 Query: 179 E 179 + Sbjct: 136 K 136 >UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophilus torridus RepID=Q6L0U2_PICTO Length = 202 Score = 118 bits (297), Expect = 9e-26, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 11/146 (7%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLR 87 + + ++ G ++ + + +I+ + G C E+ + +D+ R+ Sbjct: 66 INGNDDISIISGSIDK--KFRKSLNIYSIDSGTCGACNSELFSISIPEYDLTRYHI-FFT 122 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDK 147 +PR AD ++++G M VI M +P ++I +GACA SGG+ ++ V Sbjct: 123 NTPRHADAIILSGIYNESMKDVIDNALGAMPKPGYLILLGACALSGGIIGSGHEIKAV-- 180 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQ 173 + IPGCPP P ++ L L Sbjct: 181 -----LEIPGCPPNPYTILKGLRRLM 201 >UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, putative n=1 Tax=Ricinus communis RepID=B9SD17_RICCO Length = 188 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 2/76 (2%) Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 MAP + RLY+Q+ EPK+VI+MGAC +GGM+ D YS ++GVDK IPVD Y+ GCPP+PE Sbjct: 1 MAPSLVRLYEQIPEPKYVIAMGACTITGGMFSTDSYSTIRGVDKLIPVDAYLSGCPPKPE 60 Query: 164 AYMQALMLLQESIGKE 179 A + A+ L++ + +E Sbjct: 61 AVIDAITKLRKKLSRE 76 >UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG7_GRABC Length = 174 Score = 114 bits (285), Expect = 3e-24, Method: Composition-based stats. Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 1/113 (0%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G S C +E+ A +AR G + SP AD++++ G + I + ++ M Sbjct: 55 GGSACLLELEALRAAPGLLARHGLRFVT-SPLHADILLITGDGCHNLTSAIHQAWEAMPG 113 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 P+W I++G A G+ G + IP D+ IPG PP + + L L Sbjct: 114 PRWAIAVGDGAAGDGLLRGSYASTGNMEEIPFDLVIPGSPPAADTILSGLRAL 166 >UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shigella sp. D9 RepID=UPI0001B52F0A Length = 173 Score = 113 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 4/124 (3%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPY---NFGLSCCYVEMVTSFTAVHDVA 79 ++T + Q + + K+ + + S + Y G + C +E+ + T V D Sbjct: 3 PVLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 Query: 80 RFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIY 139 RFG +V+ +SPR AD+++ G M R Y+ + K +S GAC GG I Sbjct: 63 RFGIKVI-SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGFSTIS 121 Query: 140 SVVQ 143 + Sbjct: 122 TASG 125 >UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B297_SULD5 Length = 138 Score = 113 bits (283), Expect = 4e-24, Method: Composition-based stats. Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 3/113 (2%) Query: 61 LSCCYVEMVTS-FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 + C VE++ S G V P A++++V G + P +Q Q+ Sbjct: 15 CNGCDVEILASVLLPKFGFDALGC-VYTNDPTLANILLVTGAITARSTPYLQAALKQLPS 73 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALML 171 K V+++G C SGG++ D Y++ +D F+ VDV I GCPP P+ Q L Sbjct: 74 KKIVVALGICPISGGVFRDSYAITGPLDTFVDVDVNISGCPPSPKEIAQGLAQ 126 >UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU78_GLUOX Length = 161 Score = 113 bits (282), Expect = 5e-24, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G C++E+ + + + + G V + P AD +++ G A ++ R++ M Sbjct: 46 GCEGCFMEIESLNGSAFALEQAGF-VCVSDPADADWLLLTGAVTRVCAEMVDRVWRAMPP 104 Query: 120 PKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + +I++GACA GG + Y+ + G++ PV I GCPP P+ ++AL L + Sbjct: 105 GRSLIAVGACAVDGGPFPAGYATLGGLEALTPVRRSIAGCPPSPDDILRALQELAQ 160 >UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GND6_PARBA Length = 159 Score = 112 bits (280), Expect = 8e-24, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Query: 19 LQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDV 78 +++ E ++ + + KN G ++ +VNW R+ S+WP +FGL+CC +EM+ +D Sbjct: 22 IREAERISSLISLQEEKN---GSIDKVVNWAREGSLWPLSFGLACCNMEMMAVSMPRYDQ 78 Query: 79 ARFGAEVLRASPRQADLMVVAGTCFTKMAPVI 110 R G + RASPRQ+D+++VA + P + Sbjct: 79 DRLGT-IFRASPRQSDVIIVADAVTKQDGPRL 109 >UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU6_LEPBA Length = 273 Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 7/113 (6%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + E+ SF +V D R G + ASP+ AD +V +G +M +Q +D + E Sbjct: 148 GNNTVESELNASFNSVFDSEREGIRCV-ASPKHADTIVFSGPISEQMEGPLQTAWDVLSE 206 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 P+ +I+ G A SGG++ + + D+YI G PPRP+ +Q LL Sbjct: 207 PRALIACGTEAVSGGLFPKGKIPK------EPDLYISGDPPRPDVILQGFRLL 253 >UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax=Leptospira RepID=Q04P25_LEPBJ Length = 273 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 65 YVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVI 124 E+ SF A+ D V+ ASP+ AD +V +G M + ++ M PK ++ Sbjct: 150 EAEINASFNALFDSEASKIRVV-ASPKHADALVYSGPVGPNMEEPLNTAWETMPSPKALV 208 Query: 125 SMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 + G+ A SGG++ + + + D++I G PPRP+ + A L Sbjct: 209 ACGSEAVSGGLFKLGKLPK------EPDLFIGGDPPRPDVIISAFRYLM 251 >UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU0_ACIC1 Length = 269 Score = 102 bits (255), Expect = 8e-21, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 21/132 (15%) Query: 51 KNSIWPYNFGLSCCY-VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPV 109 + + G E++ V+D+ R G ASPR AD+++V G MA Sbjct: 124 SIHVRHVDAGSDGADEWEVLALLNPVYDIHRLGI-FFTASPRHADVLLVTGVGSRGMAAP 182 Query: 110 IQRLYDQMLEPKWVISMGACANSGG-MYDIYSVVQGVDKFIP------------------ 150 + R P VI+ G A SGG ++ Y+ G+ I Sbjct: 183 LARTLQAAPRPLVVIAAGTDAISGGLVHPTYATSGGIGDLIAATPDSAGATGAADGDPVR 242 Query: 151 VDVYIPGCPPRP 162 VD+++PG PP P Sbjct: 243 VDIWVPGSPPTP 254 >UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacterium acnes RepID=Q6A6I9_PROAC Length = 132 Score = 97.4 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 10/135 (7%) Query: 44 DMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCF 103 ++W S++ + L+CC VE S AV A E+ +P +++V+GT Sbjct: 2 KFIDWFADGSVYVVDLALACCGVE---SGAAVLANAPVREEIPDGAPI---VVLVSGTVT 55 Query: 104 TKMAPVIQRLYDQMLE--PKWVISMGACANSGGMY-DIYSVVQGV-DKFIPVDVYIPGCP 159 T +APV+ ++ P V++ GACA +GG Y D VV G+ D + D +IPGCP Sbjct: 56 TGLAPVVSDTVHELKRNHPVDVVAFGACACAGGPYWDSAGVVAGLPDAGVDADHWIPGCP 115 Query: 160 PRPEAYMQALMLLQE 174 P PE L +E Sbjct: 116 PGPETLTGLLASSRE 130 >UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 Tax=Ixodes scapularis RepID=B7QG38_IXOSC Length = 162 Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 32/48 (66%), Positives = 41/48 (85%), Gaps = 1/48 (2%) Query: 111 QRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPG 157 +++YDQMLEP+WVISMG+CAN GG Y YSVV+G D+ IPVD+Y+PG Sbjct: 78 RKVYDQMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPG 125 >UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TXX1_METKA Length = 238 Score = 77.3 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 10/109 (9%) Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGG----------MYDIYS 140 AD++ V G A +++L + V+S+G+CA +GG + Sbjct: 41 PDADILFVEGAVDFADAETLEKLEEAASAVSTVVSLGSCAATGGFERHVIGMRDPDRYHF 100 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD 189 V KF+ D I GCPP + L L+E E RP + GD Sbjct: 101 TVFPAAKFVETDYAINGCPPTTDVIASFLRALEEENEDELRPYEVLSGD 149 >UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=C7J5D7_ORYSJ Length = 114 Score = 65.8 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 C VEM+ + + +D RF + R SPRQ+D M++ GT KM P + + Sbjct: 61 CAVEMMHAGASCYDFDRFRV-IFRPSPRQSDCMIIVGTLTNKMGPALGKT 109 >UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax=Euryarchaeota RepID=FRHG_METBF Length = 259 Score = 65.0 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 10/82 (12%) Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ---------- 143 D+ +V G+ + ++ + + + K V+++G+CA G + Q Sbjct: 55 DVALVEGSVCLQDHESVEDIKETRKKSKIVVALGSCACYGNITRFSRGGQHNQPQHESYL 114 Query: 144 GVDKFIPVDVYIPGCPPRPEAY 165 + I VDVYIPGCPP PE Sbjct: 115 PIGDLIDVDVYIPGCPPSPELI 136 >UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota RepID=A6UVU9_META3 Length = 227 Score = 64.6 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 23/130 (17%) Query: 61 LSCCYVEMVTSFTAVHD--VARFGAEVLRAS--------PRQADLMVVAGTCFTKMAPVI 110 SCC + S T ++ + GA L S +AD+++V G+ + Sbjct: 10 SSCCG--CLVSLTDTYEKLLDVLGAIDLVYSQTIADAREIPEADIILVEGSVCLDDHHAM 67 Query: 111 QRLYDQMLEPKWVISMGACANSGGMY----------DIYSVVQGVDKFIPVDVYIPGCPP 160 + D + K ++++GACA +GG+ I+S + + + D+ IPGCPP Sbjct: 68 EIAQDVGKKAKILVALGACAATGGITRFCRGGQMSKPIHSSFSPITEVVKCDLAIPGCPP 127 Query: 161 RPEAYMQALM 170 PE + L+ Sbjct: 128 SPE-IIVGLI 136 >UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO Length = 82 Score = 61.5 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 8/55 (14%) Query: 129 CANSGGMY--------DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 C+ G MY D YS V VDK IPVDVY P CP PE + A+ L+E Sbjct: 21 CSCPGSMYYHIEMFGTDSYSTVHEVDKLIPVDVYSPDCPTEPEVIIDAITKLRER 75 >UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Roseiflexus RepID=A5UWN9_ROSS1 Length = 127 Score = 61.2 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 12/114 (10%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP 120 C +E++ + A A+P +AD++++ G T L ++ Sbjct: 12 CGGCDLEVIAALAAA------ADIDWAATPHEADVLLLTGPLTTDTKKAFMALLQELDHR 65 Query: 121 KWVISMGACANSGGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 +I++G CA G + +V+ + + +D GCPP P ++A+ + Sbjct: 66 APIIAVGRCAIDGHPFGRGGVAVIPNLTVHLSLD----GCPPTPTQIVEAIRTI 115 >UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R7_THEGJ Length = 229 Score = 59.6 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 10/117 (8%) Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY----------DIYSVVQ 143 D+ ++ G +++ L + + + V++ G+CA+ GG+ + Q Sbjct: 53 DVALITGGACMNEPRILEELKEIREKARVVVAFGSCASLGGILRFARGGQEPRPDHRNFQ 112 Query: 144 GVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 ++ IPVD IPGCPP P+ R G + + ++ + Sbjct: 113 PINSVIPVDYSIPGCPPTPQMLQSFFKFFMAGNESRLRLFKVTAGLKKLSGFDLIDD 169 >UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomiragia RepID=C6YT65_9GAMM Length = 268 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 32/108 (29%) Query: 94 DLMVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM--YDIY----------- 139 D+ + G+ P +Q++ ++ K+VI++GACA +GG+ Y Sbjct: 63 DIAFIEGSVNTHHDIPRLQKIREKA---KYVIAIGACAVAGGIQALRNYTNAAELLEWQK 119 Query: 140 ---------------SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 S + + +++ VD I GCP E ++A+ L Sbjct: 120 AVYPQDTDVIIKEDLSTAKAIKEYVNVDFEISGCPITTEQILKAIRQL 167 >UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13 Tax=Methanococcales RepID=VHUG_METJA Length = 288 Score = 58.5 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 72/194 (37%), Gaps = 52/194 (26%) Query: 60 GLSCCYV----------EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPV 109 G S C++ E++ + V+ + P D+ +V G + Sbjct: 15 GCSGCHISLLDLHDKLLEVLPNLEIVYAPI---IADPKEIPEGIDVFLVEGGIRNEHDEH 71 Query: 110 IQRLYDQMLEPKWVISMGACANSGGMYDIYSV---------------------------- 141 + +++ + K VI+ G CA GG+ + ++ Sbjct: 72 L--IHEIREKSKIVIAWGTCAAYGGIPGLGNLYKKEELLNYVYSTDSTENKGEIPSEEIP 129 Query: 142 -----VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA- 195 V+ + FI VD IPGCPP P+ A++ L G+E + + +V D+ + Sbjct: 130 PLEEYVKPIKDFIKVDYTIPGCPPTPKMIADAIIALLN--GEEPKLPTKIVCDECPRKKE 187 Query: 196 NMQSER-ERKRGER 208 N+ E +R R Sbjct: 188 NVFPETFKRTHEGR 201 >UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLU1_SYNFM Length = 184 Score = 55.4 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 46/157 (29%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASP--------RQADLMVVAGTCFTKMAPVIQ 111 G + C++ ++ + DV G + SP D+ +V G C + Sbjct: 18 GCAGCHMSLLDLDERLIDV--VGLVDIVYSPVADIKVFPEGVDVTLVEGACCN--DENVH 73 Query: 112 RLYDQMLEPKWVISMGACANSGGM-----------------YDIY--------------- 139 ++ K VI+ G CA +G + ++ Sbjct: 74 LAHEVRERSKIVIAFGDCAVTGNVPSMRNRLDRDQMINSVYFEGPGKPPPTSVLGHFLPT 133 Query: 140 --SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 V + + IPVD+++PGCPP PE A++ L + Sbjct: 134 LIPKVLPLHQVIPVDIFLPGCPPDPERIWAAIVALLK 170 >UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subunit n=2 Tax=Methanopyrus kandleri RepID=Q8TYW2_METKA Length = 305 Score = 54.2 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 55/150 (36%), Gaps = 40/150 (26%) Query: 90 PRQADLMVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY------------ 136 P ++ V+ G+ + V + L + V+++G CA GG++ Sbjct: 51 PEHVNVAVIEGSIRNEEDLEVAEELREAAD---IVVAVGTCACYGGVHGLANLYQLDDIL 107 Query: 137 ----------------------DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 +++ V+ + + I VD +PGCPP+PE+ + + + E Sbjct: 108 EWVFKETPTTDDEGETPEEVVPELFGYVRPLPEVIDVDYMLPGCPPKPESIAEVITAILE 167 Query: 175 SIGKERRPLSWVVGDQGVYRANMQSERERK 204 +E + + ++ E K Sbjct: 168 --DREPELPTTNLCEECPREKEDIPIEEIK 195 >UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gamma (VhuG) n=1 Tax=Archaeoglobus fulgidus RepID=O28898_ARCFU Length = 293 Score = 53.8 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 71/190 (37%), Gaps = 51/190 (26%) Query: 53 SIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP----------RQADLMVVAGTC 102 + + + G S C + M+ ++D F V A+P + D + G Sbjct: 5 AFYIAH-GCSGCTMSMLDLGERMND---FRMRVAWAAPTLGDGKYDRIPEVDYAFIEGGI 60 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSV--------------------- 141 ++ ++ + + + + +++ G CA+ GG+ + ++ Sbjct: 61 --GLSEHVEIVRELREKSETLVAFGICASCGGIMGLANLHSKEEILEDVFGSAKSSVGDL 118 Query: 142 --------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVY 193 V+ +D + VD YI GCPP PE A ++I + R W+ + V Sbjct: 119 RIPEMLEFVKPLDSVVEVDCYIGGCPPTPEQIYNAF----KAIFEGER--GWITSGKSVC 172 Query: 194 RANMQSERER 203 ++ E+ Sbjct: 173 EFCSRNLSEK 182 >UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subunit, FrhG n=3 Tax=Methanobacteriaceae RepID=A5UM99_METS3 Length = 276 Score = 53.5 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 12/94 (12%) Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ------ 143 + DL ++ G+ + + L + + + + G+CA +G + Y+ Sbjct: 94 MPEMDLCLIEGSVCLQDEHSVHELLEAREKSALICAFGSCALNG-CFTTYARGGQQAQPK 152 Query: 144 -----GVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 + + VDV +PGCP PE + ++ L Sbjct: 153 HESFLPISSLVKVDVALPGCPVAPEMIAKTVVAL 186 >UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanocaldococcus RepID=Y726_METJA Length = 216 Score = 53.5 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 18/111 (16%) Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM----------YDIYSVVQ 143 D+++V G ++++ + K +I++G+CA SGG + V Sbjct: 26 DIVLVGGAVNLDDEEEVKKIMEIRKNSKVLIAVGSCAVSGGFQRMLIGLENGFPQRFVRI 85 Query: 144 GVDKFIPVDVYIPGCPP---RPEAYMQALMLLQESIGKE---RRPLSWVVG 188 G + VD I GCPP E ++A++ + I +P + G Sbjct: 86 G--DVVKVDYAIIGCPPDEEEVERIVKAVIEKDKEIVDSYLILKPYEVIAG 134 >UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 Tax=Dictyoglomus RepID=B5YB68_DICT6 Length = 180 Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 49/165 (29%) Query: 53 SIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP--------RQADLMVVAGTC-F 103 S+W G S C++ + + ++ G E+ A+P D+ ++ G Sbjct: 8 SVW--CEGCSGCHMSFLDMDERLVELINKGLEI-NATPITDLKIPDEGTDIGIIEGAVAT 64 Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGM--YDIY---------------SVVQG-- 144 ++ + ++ K ++++G CA GG+ Y S V G Sbjct: 65 DHHEEEVKMMRERC---KIIVALGDCAVFGGIPTMRNYIPREELLERGYITTESTVDGKI 121 Query: 145 ---------------VDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 V++ I VD+Y+PGCPP +A L + E Sbjct: 122 PTSPEIGKHLPKTKAVNEVIKVDLYVPGCPPSADAIYYVLKEVLE 166 >UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTV9_THEON Length = 225 Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 13/119 (10%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLR---ASPRQADLMVVAGTCFTKMAPVIQRLYDQ 116 G C V ++ ++ + D+ LR + D+ ++ G +++ L + Sbjct: 13 GCEGCNVSIIRAYPKLMDLIELDISYLRKDECKLDEYDVAIITGGACMNEPRILEELKEI 72 Query: 117 MLEPKWVISMGACA--------NSGG--MYDIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 + V++ G+CA GG + Q ++ I VD IPGCPP P+ Sbjct: 73 REKAHTVVAFGSCATFSGILRFCRGGQEPRPDHRNFQPINSVIKVDYSIPGCPPTPQML 131 >UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=Geobacter RepID=Q39QE2_GEOMG Length = 316 Score = 52.7 bits (125), Expect = 9e-06, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 51/160 (31%), Gaps = 42/160 (26%) Query: 93 ADLMVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSV---------- 141 A L +V+G + +I+ G+CA GG+ +V Sbjct: 52 AKLGLVSGAIRTEHDRHAAIEMRKSCD---LIIAWGSCAVYGGIAGAGNVHSRQEIIDAV 108 Query: 142 -----------------------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 V +D I VD+Y+PGC P P AL+ L E Sbjct: 109 YIGNKTTATHAPPTKEVSALEPSVSPLDSVIDVDLYLPGCAPHPAFVFDALLALLE---- 164 Query: 179 ERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD 218 R P + G+ R + E+ R + PD Sbjct: 165 GRSPRT-ATGESVCARCRRKMEKTEVDRIRKNSEGVPDPD 203 >UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=Methanococcus RepID=FRHG_METVO Length = 243 Score = 52.3 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 11/92 (11%) Query: 94 DLMVVAGTCFTKMAPVIQRLYDQML-EPKWVISMGACANSGGMY----------DIYSVV 142 D+ +V G+ + + K ++++GACA SGG+ ++ Sbjct: 66 DIALVEGSVCLDDHHSMDDILTTRKNSKKSLVALGACAASGGVTRFRRVGQMSQPSHASF 125 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + I VD+ +PGCPP E+ ++ L E Sbjct: 126 VPIGDVIKVDLALPGCPPSTESIVKLLTAALE 157 >UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Coriobacteriaceae RepID=C7MNR7_CRYCD Length = 439 Score = 52.3 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 20/97 (20%) Query: 95 LMVVAGTCFTKMA-PVIQ--------RLYDQMLEPKWVISMGACANSGGMY---DIYSVV 142 +++ G K ++ L + V+++G+CA +GG + Sbjct: 125 ILIYEGAVLEKWGGEALRVAGKPGTEHLLEAAPSANAVVALGSCAVNGGWMGANPNSAGA 184 Query: 143 QGVDKF-------IPVDVYIPGCPPRPEAYMQALMLL 172 GV+KF +PV V IPGCP PE + L+ + Sbjct: 185 VGVEKFLKESGINVPV-VNIPGCPANPEWLVAVLVDV 220 >UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit FrhG n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420D3 Length = 319 Score = 51.5 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 12/94 (12%) Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ------ 143 + DL +V G+ + ++ L + + V + G+CA +G + Y+ Sbjct: 137 MPEMDLALVEGSVCLQDEHSVKELMEVREKAGLVCAFGSCAMTG-CFTRYARGGQLAQPK 195 Query: 144 -----GVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 + + VD IPGCP PE + ++ L Sbjct: 196 HESFVPISDLVKVDCAIPGCPASPEIIAKVVVAL 229 >UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (Membrane-bound hydrogenase small subunit) (Hydrogen:quinoneoxidoreductase) n=3 Tax=Bacteria RepID=C1DUF2_SULAA Length = 416 Score = 50.8 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 17/92 (18%) Query: 95 LMVVAGTCFTKMAPV----------IQRLYDQMLEPKWVISMGACANSGGM---YDIYSV 141 L+ V G+ KM +QR+ + K VI++GACA+ GG+ Y + Sbjct: 166 LLFVEGSIPVKMEYAFTTGRHPETGVQRVRRLAKDAKAVIAVGACASFGGVPAAYPNPTG 225 Query: 142 VQGVDKF---IPVDVYIPGCPPRPEAYMQALM 170 GV +PV V IP CP P + +M Sbjct: 226 AVGVMDVVSGVPV-VNIPACPANPVNIVGVIM 256 >UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Nautilia profundicola AmH RepID=B9L8N0_NAUPA Length = 288 Score = 50.8 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 23/100 (23%) Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEP-----KWVISMGACANSGGMYDI------- 138 +Q DL++V G P + ++++ K V+++G CA GGM+ Sbjct: 51 KQCDLLIVEGAL-KNNYPRLGYSLNELISKLFFKAKKVLALGTCAVYGGMFGEGLMYNKE 109 Query: 139 ----YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 Y + DK I +PGCPP P+ L ++ E Sbjct: 110 QKGHYYKCR--DKII----NLPGCPPHPDWIAFVLDMISE 143 >UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A155_THESM Length = 267 Score = 49.6 bits (117), Expect = 7e-05, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 26/105 (24%) Query: 91 RQADLMVVAGTCFTKMA-PVIQRLYDQMLEPKWVISMGACANSGGM-------------- 135 ++ D+ + G+ T+ +++++ ++ K VI++G+CA GG+ Sbjct: 57 KEVDIAFIEGSVSTQEEVELVKKIREKA---KIVIAVGSCAVHGGVQSWDKDKEFNELWK 113 Query: 136 --YDIYSV------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 Y V + V+K+I VD + GCPP + ++ AL L Sbjct: 114 TVYGDAHVKFEPKMAEPVEKYIKVDYKLYGCPPEKKDFLYALGTL 158 >UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXK1_9DELT Length = 178 Score = 49.2 bits (116), Expect = 1e-04, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 41/154 (26%) Query: 60 GLSCCYVEMVTSF------TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 G S C++ + ++A + P + DL ++ G T RL Sbjct: 14 GCSGCHMSFLDMDELLLELAPRLELAYSPLVDRKEFPDRVDLALLEGAVSTPEDEAKARL 73 Query: 114 YDQMLEPKWVISMGACANSGGM--------------------YDIYSVVQG--------- 144 + V+++G CA G + D + Sbjct: 74 VRAHS--RLVVALGDCACQGNVPALRNRLDNEQLLDLVYRQQADGPAAAPPDRNVPPLLT 131 Query: 145 ----VDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + + I VD+++PGCPP P A ++AL + + Sbjct: 132 HSLPLHRVIAVDLFLPGCPPPPAAIVRALTAVLD 165 >UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=10 Tax=Chlorobiaceae RepID=B4SFA2_PELPB Length = 258 Score = 48.8 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 24/87 (27%) Query: 94 DLMVVAGTCFTKMA-PVIQRLYDQMLEPKWVISMGACANSGGM----------------Y 136 D+ ++ G+ + + ++ Q K +++ G CA GG+ Y Sbjct: 63 DIALIEGSISRQDEVERLLKIRQQA---KILVAFGTCACFGGINSLKNRFPAREMIDAVY 119 Query: 137 DIYSV----VQGVDKFIPVDVYIPGCP 159 + V+ + + VD+ IPGCP Sbjct: 120 PGMPIETLPVRKISDVVKVDLSIPGCP 146 >UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH Length = 330 Score = 48.1 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 13/94 (13%) Query: 95 LMVVAGTCFTKM---------APVIQRLYDQMLEPKWVISMGACANSGGM---YDIYSVV 142 + VV G+ T ++ D + + I++G CA GG+ Sbjct: 136 ICVVEGSIATAYNGAYGKVGGRTFLEIANDVIPKAAVTIALGTCAAYGGIPSAAPNPGGY 195 Query: 143 QGVDKFIPVD-VYIPGCPPRPEAYMQALMLLQES 175 +GV I V + I GCPP P + ++ Sbjct: 196 KGVKDAIGVATINISGCPPNPLNLLSTIVKYLNK 229 >UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2V8_HERA2 Length = 124 Score = 48.1 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLY-DQMLEPKWVISMGACANSGGMYDIYSVVQGVD 146 A+P AD+ V+ G + P + ++ D + + +I++G + G + G+ Sbjct: 33 ATPAHADIFVLTGPIPLLLRPALSNVWRDFIADRAPLIALGRASIDGHPFGR----GGLA 88 Query: 147 KF--IPVDVYIPGCPPRPEAYMQALML 171 + I V I G PP A ++ Sbjct: 89 ELPEIQVAAKIDGDPPTVAAIQAGIVQ 115 >UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Tax=Thermococcaceae RepID=B6YU80_THEON Length = 265 Score = 47.7 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 26/99 (26%) Query: 94 DLMVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM----------------Y 136 D+ + G+ + +++++ + K V+++GACA GG+ Y Sbjct: 54 DIAFIEGSVSTEEEVELVKKIRENA---KIVVAVGACATQGGVQSWEKDKSLEELWKAVY 110 Query: 137 DIYSV------VQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 V + ++ +I VD I GCPP + ++ A+ Sbjct: 111 GDGKVKFEPKMAEPLENYIKVDYRIYGCPPEKKDFIYAI 149 >UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=Desulfitobacterium hafniense RepID=B8FWY3_DESHD Length = 375 Score = 47.7 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Query: 121 KWVISMGACANSGGM---YDIYSVVQGVDKFIP--VDVYIPGCPPRPEAYMQALMLL 172 K+V+++G CA GG Y + GV +P + + GCP P+ M L+ L Sbjct: 145 KYVVAVGHCATYGGPVAGYPNPTQSTGVQNILPERRVINVSGCPAHPDWIMGTLLHL 201 >UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5Y5_KORCO Length = 319 Score = 47.3 bits (111), Expect = 3e-04, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 54/118 (45%) Query: 94 DLMVVAGTCF----TKMAPVIQRLYDQMLEPKWVISMGACANSGGM-------------- 135 D+ ++ G +M +++R + K VI+ G+CA+ GG+ Sbjct: 60 DVAIINGGIRTSEHEEMVKLLRR------KSKLVIAYGSCAHMGGIPALANAYTRESILK 113 Query: 136 --YDIYSVVQ----------------------------GVDKFIPVDVYIPGCPPRPE 163 Y+ V +D I VD YIPGCPP PE Sbjct: 114 YVYEEAPTVTNPEGKRPKTRVSVDGMDFELPEFLEYLDPLDAVIDVDYYIPGCPPTPE 171 >UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein n=4 Tax=Proteobacteria RepID=A7IHL6_XANP2 Length = 110 Score = 47.3 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 71 SFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 + A D++R G PRQA++++V M Y QM P+ V+ +G Sbjct: 41 ALAAGLDLSRAGLTEADG-PRQANVLLVMLPLPAPMLKAATVAYAQMPRPRTVLVLGE 97 >UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermococcaceae RepID=B6YSK0_THEON Length = 246 Score = 47.3 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 31/127 (24%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRASPR-------QADLMVVAGTCFTKMAPVIQRL 113 C + ++ + + D+ F E+ D+ +V GT ++ + + Sbjct: 15 CGGCALNILFLYEKLFDLLEF-YEITEFHMATSLSEGSHYDVALVTGTVSSQRDLALLKE 73 Query: 114 YDQMLEPKWVISMGACANSGGMY----------------DIYSVVQGVD-----KFIPVD 152 + ++I++G CA G + D + ++ +D +++ VD Sbjct: 74 ARNHSD--YLIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALDSKPVVEYVAVD 131 Query: 153 VYIPGCP 159 +PGCP Sbjct: 132 FALPGCP 138 >UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X546_DESRD Length = 334 Score = 46.5 bits (109), Expect = 6e-04, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 50/172 (29%) Query: 94 DLMVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-------------- 138 D+ + G ++ A +RL ++ + +++ GACA GG+ + Sbjct: 61 DIGLFNGVVRTSEQAEDARRLRERC---RVLVAYGACACHGGIPGLANQSDREEIFRVAY 117 Query: 139 ------------------------------YSVVQGVDKFIPVDVYIPGCPPRPEAYMQA 168 + V+ + + + VD ++PGCPP PE + Sbjct: 118 QDTVSTDNPDQIRPQQRTPVPGGEVTLPAFHDSVRALHQVVDVDYFLPGCPPTPERILDL 177 Query: 169 LMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI 220 L ++Q + P + + E +R R+ L P EI Sbjct: 178 LGVVQAYNAGDDLPPAGSILAPEATLCQECPRAETRRAGRMP--RLYRPHEI 227 >UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n=7 Tax=Deltaproteobacteria RepID=A0LP54_SYNFM Length = 324 Score = 46.5 bits (109), Expect = 7e-04, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 56/166 (33%) Query: 61 LSCCYVEMVTSFTAVHDV------------------ARFGAEVLRASPRQADLMVVAGTC 102 + C + M+ ++ + G E P +AD+ +V+G Sbjct: 13 CAGCEISMLNMGGLFLELLKEIRIVHMPLLFDHKYFGQAGEENFIGIP-EADIGIVSGGI 71 Query: 103 -FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM------------YDIYS-------VV 142 + V ++ Q + ++++G CA GG+ + Y Sbjct: 72 RNEEQLEVALKVRAQC---RILVALGTCATHGGIPALMNRYSDEDLFRRYYRTSETTEAA 128 Query: 143 QGVDKFIP--------------VDVYIPGCPPRPEAYMQALMLLQE 174 ++ +P VDVY+ GCPP P+ L + Sbjct: 129 APPNEVVPRFLDRTYALDEKARVDVYMAGCPPHPDYLGAMFRTLLD 174 >UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small subunit n=5 Tax=Dehalococcoides RepID=D2BHA4_DEHSV Length = 312 Score = 46.1 bits (108), Expect = 8e-04, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 36/116 (31%) Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSV--------- 141 +ADL ++ G + + + + K ++++G CA GG+ + ++ Sbjct: 59 PEADLGIITGGI--RNEENRELALEMRKKCKLIVALGTCACFGGIPALANLSTTEDMLKQ 116 Query: 142 -------------------------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 V VD+ I VD+++PGCPP P ++ L + Sbjct: 117 VFSKEKGTDPASPPGDKSLPKMLDRVYAVDEIITVDIHLPGCPPTPAHIVELLTAV 172 >UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=63 Tax=Proteobacteria RepID=PHNS_DESDA Length = 315 Score = 45.8 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 95 LMVVAGTCFTKM-----APVIQRLYDQ----MLEPKWVISMGACANSGGM---YDIYSVV 142 + +V G T M +YD + + K V+S+G CA GG+ + Sbjct: 120 ICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGGIQAAKPNPTAA 179 Query: 143 QGVDKFIP----VDVYIPGCPPRPEAYMQALMLLQE 174 +G++ + +PGCPP P + L+ + Sbjct: 180 KGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLK 215 >UniRef50_B4U5S1 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5S1_HYDS0 Length = 320 Score = 45.8 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 42/181 (23%) Query: 33 VNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVH-DVARF---------- 81 +N N +N + R +W + +CC ++ S + V D+ Sbjct: 31 INPNEINDIINALKQKPRIPVLWFHGLECTCCSESLMRSSSPVFSDMVSLISLEYDDLIS 90 Query: 82 ---GAEVLRASPRQAD------LMVVAGTCF------------TKMAPVIQRLYDQMLEP 120 G +L + + ++ + G+ + + Sbjct: 91 ASCGENLLNYKKKIIEQYKGNYILAIEGSITEFEDGACCMVGGRSFNEELLEAAEGA--- 147 Query: 121 KWVISMGACANSGGM---YDIYSVVQGVDKFI---PVDVYIPGCPPRPEAYMQALMLLQE 174 K +I+ G+CA+ G + Y + VD I P+ V +PGCPP PE ++ + Sbjct: 148 KAIIAWGSCASFGCVQVAYPNPTKSSSVDTIIKNKPI-VKVPGCPPIPEVMASVIVYMLL 206 Query: 175 S 175 Sbjct: 207 K 207 >UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n=46 Tax=Bacteria RepID=Q3M430_ANAVT Length = 181 Score = 45.8 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 43/156 (27%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRA------SPRQADLMVVAGTCFTKMAPVIQRL 113 G S C++ + + D+A V P D+++V G + + Sbjct: 13 GCSGCHMSFLDLDEWLIDLAAQADVVFSPFADIKEYPEGVDVVLVEGAIAN--EEHLTTI 70 Query: 114 YDQMLEPKWVISMGACANSGGMY-----------------------------------DI 138 + +IS G CA +G + + Sbjct: 71 KIVRERSQILISFGDCAVTGNVTALRNPLGSAEPVLQRCYIQAVDINPQIPQEPGIVPPL 130 Query: 139 YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 V V +PVD+Y+PGCPP AL L + Sbjct: 131 LDRVTPVHSIVPVDIYLPGCPPSATRIRAALEPLLQ 166 >UniRef50_A0LKF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKF2_SYNFM Length = 300 Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 35/124 (28%) Query: 82 GAEVLRASPRQADLMVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM----- 135 G + + PR AD+ +V+G V + + + +I+ G+CA GG+ Sbjct: 53 GDSDVVSIPR-ADVGIVSGGIRTEHGLAVAKAVRESCD---ILIANGSCACMGGIPSLAN 108 Query: 136 ----------------------YDIYSV---VQGVDKFIPVDVYIPGCPPRPEAYMQALM 170 +++ + V +++ +PVD+++PGCPP + AL Sbjct: 109 LVPPDVLKQGVPNLEHGVEDGDFELPPLTARVAAINEVVPVDIFLPGCPPPTHLFAAALQ 168 Query: 171 LLQE 174 + E Sbjct: 169 AVLE 172 >UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXG1_OPITP Length = 334 Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 140 SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 V+ +D+ + VD YIPGCPP P+ A+ L E Sbjct: 148 HTVRSLDQVVAVDYYIPGCPPTPKITKAAITALLE 182 >UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6F3_9DELT Length = 328 Score = 45.4 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%) Query: 124 ISMGACANSGGM---YDIYSVVQGVDKFIPVD--VYIPGCPPRPEAYMQALML 171 I+ G CA+ GG+ + +GVD+ P + +PGCPP P + + ++ Sbjct: 164 ITYGTCASYGGVQKAAPNPTACKGVDELFPGKPIINVPGCPPNPYSLVGTIVY 216 >UniRef50_C7NU23 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NU23_HALUD Length = 191 Score = 45.0 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 43/156 (27%) Query: 60 GLSCCYVEMVTS------FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 G S C++E + D+ V +AD+ + G + + Sbjct: 24 GCSGCHMEFLNVDHGLVDLVEEVDIVASHMIVDEKGVPEADVGIAEGVVTNEENVEVAEE 83 Query: 114 YDQMLEPKWVISMGACANSGGMY---------------------DIYSVV---------- 142 + + V++ G CA G+ D V Sbjct: 84 LRENCD--TVVAWGDCAALRGIMSLRNYQDRDEMLEETFMGEADDESEVPFGDDEGVPKL 141 Query: 143 ----QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + +D++I VDVY+PGCPP E ++L L Sbjct: 142 LEDARPLDEYIDVDVYVPGCPPDAEVMKESLEALAR 177 >UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCC1_9PROT Length = 369 Score = 45.0 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 16/114 (14%) Query: 83 AEVLRASPRQAD--LMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYS 140 + S AD + G + RL + K +I++G CA+ GG+ Sbjct: 131 LLFVEGSIPLADNGVYGTIGPSGETYKDHLLRL---ASKAKAIIAVGNCASFGGVVAANP 187 Query: 141 VVQGVDKFIPVD------VYIPGCPPRPEA-----YMQALMLLQESIGKERRPL 183 G + VD + +P CP PE M AL + +RPL Sbjct: 188 NPTGATGVMGVDGINVPIINLPACPVNPETMIGVLIMYALTGELPELDSLKRPL 241 >UniRef50_B1L3Q1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3Q1_KORCO Length = 258 Score = 44.6 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 27/133 (20%) Query: 94 DLMVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM----------------- 135 D+ V G+ + I+R+ K ++++G CA GG+ Sbjct: 53 DIAFVEGSVSTERDLEYIKRIRG---NSKILVALGDCAVWGGIQASTSGQDPKELMRSVY 109 Query: 136 ------YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD 189 Y +G+ + +PVD I GCP + + + L+ L + E + Sbjct: 110 KTEKNLYGFLGEHKGISEVVPVDYEIQGCPIEGKEFARVLIDLVRDVKPELPDYPVCIEC 169 Query: 190 QGVYRANMQSERE 202 + + ER Sbjct: 170 KVREIPCLIVERG 182 >UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NPL1_HALUD Length = 266 Score = 44.6 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 30/108 (27%) Query: 92 QAD----LMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM--------YD-- 137 +D V G + + D V+++G+CA GG+ ++ Sbjct: 50 HSDEYEIAFVEGGVATAHDERRLTDIRDNAD---VVVALGSCAAFGGINALRNHQDFETV 106 Query: 138 -------------IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 Y + + ++ I V+ IPGCP E ++ A+ L Sbjct: 107 KERVYGEDADSITSYPIARPIEDVIEVEYEIPGCPIDREEFLGAVTAL 154 >UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Tax=Bacteria RepID=Q2LYD8_SYNAS Length = 253 Score = 44.6 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 39/140 (27%) Query: 59 FGLSCCYVEMVTSFTAVHDVARFG-AEVLRASPRQA-------DLMVVAGTCF-TKMAPV 109 C +++ A+ D+ G +V+ + D+ +V G+ Sbjct: 16 ACCEGCQLQVANLGEALLDI--LGAIDVVEFREVMSEKWDKNYDVAIVEGSITDEHAEQR 73 Query: 110 IQRLYDQMLEPKWVISMGACANSGGM-----------------------YDIYSVVQGVD 146 I+++ D+ +I+ G+CA GG+ +D + + Sbjct: 74 IRKIRDRSA---VLIAYGSCATIGGVNGMKNSFVLDEIRQSVYGKDYQLFDSKKT-RPIH 129 Query: 147 KFIPVDVYIPGCPP-RPEAY 165 + + VD +I GCP PE Sbjct: 130 QVVKVDYFINGCPVYHPEVI 149 >UniRef50_A2X3X1 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2X3X1_ORYSI Length = 65 Score = 44.2 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 22/39 (56%) Query: 37 VFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAV 75 + K++D++NW R+ +WP F L+ VEM+ + Sbjct: 27 FVISKVDDLMNWARRGLMWPMTFRLTYYAVEMMHKGASR 65 >UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2X8_UNCMA Length = 232 Score = 44.2 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 16/121 (13%) Query: 59 FGLSCCYVEMVTSFTAVHDV-ARFGAEVLR-----ASPRQADLMVVAGTCFTKMAPVIQR 112 S C + + +F V D+ + + + DL+ V G + ++ Sbjct: 12 AACSGCEISFLDNFERVLDMMDMVDIDYMTLIADATEIPKVDLLFVDGAACLQSKESVES 71 Query: 113 LYDQMLEPKWVISMGACANS--------GG--MYDIYSVVQGVDKFIPVDVYIPGCPPRP 162 L ++++ G C+++ GG + + + + VD ++PG PP P Sbjct: 72 LKKARENTGFLVAWGGCSSTATINNFSRGGQSPQPQHESFPQISRLVKVDAFVPGSPPGP 131 Query: 163 E 163 E Sbjct: 132 E 132 >UniRef50_Q2IH66 Methyl-viologen-reducing hydrogenase, delta subunit n=4 Tax=Anaeromyxobacter RepID=Q2IH66_ANADE Length = 491 Score = 43.8 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQG---VDKFIPVDVYIPGCPP 160 + R + P+ + G G + ++ + + VD IPGCPP Sbjct: 274 EALLEAAYRAPPSVSNPEAPLPGGPVRADGATLSLPVLLPRTLTLADVVSVDYTIPGCPP 333 Query: 161 RPEAYMQALMLLQESI--GKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD 218 P AL L + V + R + ER R T+ P+ Sbjct: 334 SPAVVQAALDALLGDAPPPRGAVLAPDVSLCEDCPRKGSRPERIELHALRRLATSAVDPE 393 >UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clostridia RepID=Q3ABV6_CARHZ Length = 354 Score = 43.8 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Query: 121 KWVISMGACANSGGM---YDIYSVVQGVDKFI-PVDVY-IPGCPPRPE 163 K VI++G CA GG+ + V + I P V IPGCPP P+ Sbjct: 146 KAVIAIGTCAAFGGIPAADPNPTGCVPVTEVIDPKKVLNIPGCPPHPD 193 >UniRef50_Q0FXV5 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXV5_9RHIZ Length = 391 Score = 43.8 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 76 HDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVI 124 + ARF V ASPR A + ++AG + ++RL+DQM P+ + Sbjct: 19 FNDARF---VRAASPRHAAIFLIAGRMRLEDREDLRRLHDQMPHPRVTL 64 >UniRef50_B9KFD7 Quinone-reactive Ni/Fe-hydrogenase, small subunit n=2 Tax=Campylobacter RepID=B9KFD7_CAMLR Length = 544 Score = 42.7 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 7/77 (9%) Query: 97 VVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM---YDIYSVVQGVDKFIPVDV 153 + G ++Q+ K + +MG C++ GG+ + + G+ K + V Sbjct: 139 LTIGAHGENGYEILQKCAKNA---KTIFAMGTCSSFGGIQAAHPNPTKSIGISKVLEEKV 195 Query: 154 -YIPGCPPRPEAYMQAL 169 IPGCPP + AL Sbjct: 196 INIPGCPPSDANIIAAL 212 >UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquificaceae RepID=A7BI79_HYDTH Length = 345 Score = 42.3 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 20/83 (24%) Query: 95 LMVVAGTCFTKMAPV---------IQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGV 145 +++V G+ + V ++ L + VI++G+CA+ GG+ G Sbjct: 114 ILIVEGSVSPRNKGVYCTVSGKSNVELLKEAAQNAGLVIAVGSCASWGGIPHAEPNPTGA 173 Query: 146 DKFIPV--------DVYIPGCPP 160 +PV V IPGCPP Sbjct: 174 ---VPVSQILGDRQVVNIPGCPP 193 >UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria RepID=Q59113_9BACT Length = 179 Score = 42.3 bits (98), Expect = 0.011, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 35/87 (40%) Query: 121 KWVISMGACANSGGM-----------------YDIYSVVQG------------------V 145 K++++ G CA GG+ + S V + Sbjct: 77 KYLVAWGDCAVFGGINCMRNFIPKDVVLREGYIETASTVNPQGIVPSEDIPELLPRALPI 136 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLL 172 D + VDVY+PGCPP + L Sbjct: 137 DYEVKVDVYVPGCPPDADTIYYVFKEL 163 >UniRef50_B2N3C8 Hydrogenase-4 component I n=2 Tax=Enterobacteriaceae RepID=B2N3C8_ECOLX Length = 124 Score = 42.3 bits (98), Expect = 0.013, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%) Query: 151 VDVYIPGCPPRPEAYMQA----LMLLQESI 176 +DV+IPGCPP P A + L LLQ+ I Sbjct: 6 IDVWIPGCPPTPAATIHGFAVALGLLQQKI 35 >UniRef50_C5S9B0 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9B0_CHRVI Length = 251 Score = 41.9 bits (97), Expect = 0.015, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 28/89 (31%) Query: 95 LMVVAGTCFTKMAPV-IQRLYDQMLEPKWVISMGACANSGGM------------------ 135 + + G+C I+ + +Q + V+++GACA+ GG+ Sbjct: 52 IAFIEGSCTRPSDEAKIREIREQA---QIVVALGACAHLGGINAIRNRMPLEQTREYVYG 108 Query: 136 -----YDIYSVVQGVDKFIPVDVYIPGCP 159 ++ Y + + I VD IPGCP Sbjct: 109 DKKDWFETYPA-RPLSAVIEVDAVIPGCP 136 >UniRef50_Q31DZ5 Ni,Fe-hydrogenase small subunit n=4 Tax=Proteobacteria RepID=Q31DZ5_THICR Length = 813 Score = 41.9 bits (97), Expect = 0.016, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 20/94 (21%) Query: 95 LMVVAGTCFTKMA-------------PVIQRLYDQMLEPKWVISMGACANSGGMY---DI 138 +++V G M + + Q V+++G+CA GG+ Sbjct: 606 ILIVEGAVPLGMGGNFLRIGPQGETGEALLKRVAQHAS--AVMAVGSCAFDGGVVAAAPN 663 Query: 139 YSVVQGVDKFIPVD--VYIPGCPPRPEAYMQALM 170 + GV + + D + +PGCP P + L+ Sbjct: 664 PTGAVGVSEALGRDDIINLPGCPVNPINVVGTLL 697 >UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI Length = 180 Score = 41.5 bits (96), Expect = 0.021, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 V+ V + VDV++PGCPP +A L L Sbjct: 134 VKPVHGEVKVDVFVPGCPPSADAIWHVLSEL 164 >UniRef50_D2BG44 Ni/Fe hydrogenase, small subunit n=5 Tax=Dehalococcoides RepID=D2BG44_DEHSV Length = 354 Score = 41.1 bits (95), Expect = 0.025, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 28/127 (22%) Query: 110 IQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQG---VDKFI-------PVDVYIPGCP 159 ++ + + + V++ G C+ GG+ G V + + PV V +PGCP Sbjct: 141 LEHVLNLAPKALAVVAAGTCSAFGGITASAPNPTGAKAVSEILKEHNITTPV-VNLPGCP 199 Query: 160 PRPE--------AYMQALMLL-QESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIA 210 P P+ M L L + +G+ + ++ DQ R + + Sbjct: 200 PHPDWVVGTLATVLMSGLDALDLDDMGRPKAYYGKLLHDQCP--------RRGHYEKGLF 251 Query: 211 VTNLRTP 217 T L P Sbjct: 252 ATKLSEP 258 >UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n=9 Tax=Desulfovibrio RepID=PHNS2_DESVH Length = 324 Score = 40.7 bits (94), Expect = 0.031, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Query: 121 KWVISMGACANSGGMYDIYSVVQGV----DKFIPVD---VYIPGCPPRPEAYMQALMLLQ 173 K VI+MG CA+ GG+ G + P + I GCPP P Y+ ++ L Sbjct: 156 KAVIAMGTCASFGGIQAAAPNPSGAIGVREALAPFGIQPINIAGCPPNPVNYIGTVVHLL 215 Query: 174 ES 175 Sbjct: 216 TK 217 >UniRef50_D2ATL3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=10 Tax=Bacteria RepID=D2ATL3_STRRD Length = 358 Score = 40.0 bits (92), Expect = 0.061, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 12/76 (15%) Query: 117 MLEPKWVISMGACANSGGMY---DIYSVVQGVDKFIPVD---------VYIPGCPPRPEA 164 + V++ G CA GG++ + GV ++ D V +PGCP +P+ Sbjct: 137 APKATAVLAAGTCATYGGIHAMAGNPTGAMGVADYLGWDWRSKAGLPIVNVPGCPIQPDN 196 Query: 165 YMQALMLLQESIGKER 180 + ++ L + + Sbjct: 197 LSETILYLLYQVAGQA 212 >UniRef50_Q1AZS0 Ni Fe-hydrogenase III large subunit-like protein n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AZS0_RUBXD Length = 540 Score = 40.0 bits (92), Expect = 0.065, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 22/128 (17%) Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 DV G + PR A +++V G + +Y QM+ P+ V++ GA S Sbjct: 42 DVEAAGLG-MTGVPRHASVLLVVGELPAALRRAAAVVYAQMMRPRAVLAAGAGDLS--PL 98 Query: 137 DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRAN 196 V G+ + E + + L+ + + + G G Sbjct: 99 PGADVSVGLSQ---------------EELEEGVARLRTAFARGA----FAPGAAGFEPEM 139 Query: 197 MQSERERK 204 +++ E Sbjct: 140 LRARTEYA 147 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=... 275 7e-73 UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Pr... 246 4e-64 UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 239 6e-62 UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 239 7e-62 UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=... 236 6e-61 UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=... 235 8e-61 UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 235 1e-60 UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 ... 234 2e-60 UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=B... 234 2e-60 UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 231 1e-59 UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 230 2e-59 UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=... 230 3e-59 UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 230 3e-59 UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=B... 229 4e-59 UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemm... 229 7e-59 UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=F... 226 4e-58 UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Ta... 226 4e-58 UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=P... 226 5e-58 UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=c... 226 6e-58 UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=c... 225 8e-58 UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=c... 224 2e-57 UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 222 5e-57 UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=P... 221 1e-56 UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax... 221 2e-56 UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyce... 218 9e-56 UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax... 217 2e-55 UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Ba... 217 2e-55 UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=... 217 2e-55 UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=... 217 3e-55 UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=De... 216 4e-55 UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 216 5e-55 UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=S... 213 3e-54 UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 ... 212 6e-54 UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax... 212 7e-54 UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria... 212 8e-54 UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax... 211 1e-53 UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometr... 211 1e-53 UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=... 209 4e-53 UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 209 6e-53 UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=... 209 6e-53 UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=c... 208 1e-52 UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 T... 207 2e-52 UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=F... 207 2e-52 UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cy... 206 5e-52 UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Ba... 205 1e-51 UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydr... 205 1e-51 UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=F... 204 1e-51 UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=N... 204 2e-51 UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Ta... 202 8e-51 UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=... 201 2e-50 UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=p... 200 2e-50 UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=... 200 3e-50 UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea R... 199 4e-50 UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 199 6e-50 UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd s... 199 6e-50 UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=... 193 4e-48 UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=C... 191 1e-47 UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 189 4e-47 UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 187 2e-46 UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur prot... 187 3e-46 UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=T... 186 4e-46 UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bac... 185 8e-46 UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=T... 184 2e-45 UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 ... 183 3e-45 UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=c... 182 5e-45 UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 182 5e-45 UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea Rep... 181 2e-44 UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 180 3e-44 UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 180 3e-44 UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 178 1e-43 UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-li... 177 2e-43 UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 177 2e-43 UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacter... 177 2e-43 UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=T... 177 2e-43 UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteob... 177 3e-43 UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID... 177 3e-43 UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (Mbx... 175 8e-43 UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q... 174 2e-42 UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=S... 174 3e-42 UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 ... 172 8e-42 UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 170 2e-41 UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 169 6e-41 UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 169 6e-41 UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 168 1e-40 UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase sma... 167 2e-40 UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 167 2e-40 UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collins... 166 5e-40 UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=... 165 9e-40 UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 165 1e-39 UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN 162 6e-39 UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 162 9e-39 UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 161 1e-38 UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulf... 161 1e-38 UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarch... 161 2e-38 UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 160 3e-38 UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobac... 159 5e-38 UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 159 5e-38 UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=D... 159 5e-38 UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collins... 159 9e-38 UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=I... 158 1e-37 UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japoni... 157 4e-37 UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen l... 157 4e-37 UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=A... 156 5e-37 UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 155 7e-37 UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=... 155 1e-36 UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 154 2e-36 UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermopl... 154 3e-36 UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit ... 153 4e-36 UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteri... 153 5e-36 UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=... 152 8e-36 UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Ep... 151 2e-35 UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetom... 150 2e-35 UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfit... 149 6e-35 UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 148 1e-34 UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxi... 148 1e-34 UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meio... 143 4e-33 UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 143 5e-33 UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 142 7e-33 UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 141 1e-32 UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 141 2e-32 UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen l... 140 3e-32 UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarch... 140 3e-32 UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 139 6e-32 UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 139 9e-32 UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 T... 137 2e-31 UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 137 2e-31 UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 136 5e-31 UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 135 1e-30 UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospiri... 135 1e-30 UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophi... 133 5e-30 UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 132 1e-29 UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 130 4e-29 UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 127 3e-28 UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 127 3e-28 UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 123 5e-27 UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 122 7e-27 UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=G... 119 8e-26 UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Glucono... 113 5e-24 UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, puta... 109 7e-23 UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=... 108 2e-22 UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax... 107 2e-22 UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shige... 106 5e-22 UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulib... 106 6e-22 UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 104 2e-21 UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax... 102 8e-21 UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13... 96 6e-19 UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n... 95 2e-18 UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=... 94 2e-18 UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacte... 94 3e-18 UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subuni... 90 4e-17 UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax... 90 6e-17 UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 89 1e-16 UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gam... 89 1e-16 UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota ... 88 2e-16 UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 ... 84 3e-15 UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 81 3e-14 UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=... 81 3e-14 UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subuni... 80 4e-14 UniRef50_B4U5S1 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Hy... 80 6e-14 UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 80 7e-14 UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subuni... 78 2e-13 UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=... 78 2e-13 UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit F... 77 4e-13 UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 77 4e-13 UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 ... 75 2e-12 UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 74 3e-12 UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small sub... 72 1e-11 UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomirag... 70 5e-11 UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 70 7e-11 UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 69 2e-10 UniRef50_C7NU23 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 69 2e-10 UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanoca... 69 2e-10 UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH 67 6e-10 UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermoco... 65 1e-09 UniRef50_A0LKF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 65 1e-09 UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Co... 65 1e-09 UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermo... 65 2e-09 UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=6... 64 3e-09 UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (... 64 3e-09 UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=... 64 4e-09 UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subuni... 62 2e-08 UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 60 5e-08 UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO 60 6e-08 UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 60 8e-08 UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Ta... 58 2e-07 UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=De... 57 7e-07 UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=De... 56 9e-07 UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 55 1e-06 UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein... 50 4e-05 Sequences not found previously or not previously below threshold: UniRef50_B8G3U7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 79 1e-13 UniRef50_A1SU83 Hydrogen dehydrogenase n=23 Tax=Proteobacteria R... 75 2e-12 UniRef50_Q21RP8 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 72 2e-11 UniRef50_Q0W6J6 Coenzyme F420-non-reducing hydrogenase (Methyl v... 71 2e-11 UniRef50_Q50782 F420-non-reducing hydrogenase subunit G n=15 Tax... 70 7e-11 UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria ... 69 2e-10 UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI 68 3e-10 UniRef50_B8ERX2 Hydrogen dehydrogenase n=1 Tax=Methylocella silv... 66 7e-10 UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subuni... 66 9e-10 UniRef50_D2REQ3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 66 1e-09 UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Ta... 64 3e-09 UniRef50_D1Z1F3 Coenzyme F420 hydrogenase subunit gamma n=1 Tax=... 64 4e-09 UniRef50_Q6ARY6 Related to periplasmic [NiFeSe] hydrogenase, sma... 64 4e-09 UniRef50_C1DUT4 Putative [NiFe] hydrogenase, delta subunit n=1 T... 62 2e-08 UniRef50_C3XGH6 Ni/Fe-hydrogenase small subunit n=8 Tax=Proteoba... 62 2e-08 UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clost... 62 2e-08 UniRef50_B1I576 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 61 3e-08 UniRef50_C8S807 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 60 4e-08 UniRef50_B5YFX1 F420-non-reducing hydrogenase subunit G n=1 Tax=... 60 4e-08 UniRef50_Q24VQ2 Ni,Fe-hydrogenase small subunit n=2 Tax=Desulfit... 60 7e-08 UniRef50_C9R9W3 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 60 7e-08 UniRef50_B9KFD7 Quinone-reactive Ni/Fe-hydrogenase, small subuni... 59 9e-08 UniRef50_Q06173 Periplasmic [NiFe] hydrogenase small subunit 1 n... 59 1e-07 UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 58 2e-07 UniRef50_C3XE47 Quinone-reactive Ni/Fe hydrogenase n=1 Tax=Helic... 57 4e-07 UniRef50_D2BG44 Ni/Fe hydrogenase, small subunit n=5 Tax=Dehaloc... 57 5e-07 UniRef50_B5EBV9 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 57 5e-07 UniRef50_Q2IH66 Methyl-viologen-reducing hydrogenase, delta subu... 57 6e-07 UniRef50_A8UU12 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 56 8e-07 UniRef50_B1L3Q1 Coenzyme F420-reducing hydrogenase, gamma subuni... 56 1e-06 UniRef50_B5IEA4 NADH ubiquinone oxidoreductase, 20 Kd subunit fa... 55 1e-06 UniRef50_P13063 Periplasmic [NiFeSe] hydrogenase small subunit n... 54 3e-06 UniRef50_O33405 Uptake hydrogenase small subunit n=221 Tax=Bacte... 54 4e-06 UniRef50_C5S9B0 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 54 5e-06 UniRef50_Q7VJP5 Putative uncharacterized protein n=3 Tax=Helicob... 54 5e-06 UniRef50_B9L9V0 Hydrogenase n=1 Tax=Nautilia profundicola AmH Re... 53 6e-06 UniRef50_A4YF94 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 53 6e-06 UniRef50_A5GFC8 Hydrogenase (NiFe) small subunit HydA n=6 Tax=Pr... 53 6e-06 UniRef50_B0TDW1 Uptake [ni/fe] hydrogenase small subunit n=11 Ta... 53 8e-06 UniRef50_A5I2W4 Hydrogenase small subunit n=13 Tax=Firmicutes Re... 53 8e-06 UniRef50_C0QP84 Putative [NiFe] hydrogenase, delta subunit n=1 T... 53 9e-06 UniRef50_UPI000197A0EB hypothetical protein HcinC1_01015 n=1 Tax... 52 1e-05 UniRef50_D2LGK5 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 52 1e-05 UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminiba... 52 2e-05 UniRef50_Q5HT18 Hydrogenase, (NiFe)/(NiFeSe) small subunit famil... 52 2e-05 UniRef50_C0GED7 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 51 3e-05 UniRef50_Q2J4E9 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 51 3e-05 UniRef50_Q31DZ5 Ni,Fe-hydrogenase small subunit n=4 Tax=Proteoba... 51 3e-05 UniRef50_P12635 Uptake hydrogenase small subunit n=8 Tax=Bacteri... 50 4e-05 UniRef50_C1SPM4 Hydrogenase (NiFe) small subunit HydA n=1 Tax=De... 50 6e-05 UniRef50_Q1NJF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 50 6e-05 UniRef50_Q1NM22 Ni-Fe hydrogenase, small subunit n=3 Tax=Deltapr... 50 7e-05 UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquifica... 50 7e-05 UniRef50_B5EQ53 NADH ubiquinone oxidoreductase 20 kDa subunit n=... 50 7e-05 UniRef50_D2RD73 Hydrogenase (NiFe) small subunit HydA n=3 Tax=Ar... 50 8e-05 UniRef50_A0L609 NADH ubiquinone oxidoreductase, 20 kDa subunit n... 49 8e-05 UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n... 49 1e-04 UniRef50_C2KSS0 Hydrogenase (Acceptor) n=3 Tax=Bacteria RepID=C2... 48 2e-04 UniRef50_Q30QL6 Ni-Fe hydrogenase, small subunit n=2 Tax=Campylo... 48 2e-04 UniRef50_Q0W6U0 Coenzyme F420-non-reducing hydrogenase (Methyl v... 48 2e-04 UniRef50_B2TM84 [Ni/Fe] hydrogenase, small subunit n=2 Tax=Clost... 48 2e-04 >UniRef50_Q492H7 NADH-quinone oxidoreductase subunit B n=225 Tax=Bacteria RepID=NUOB_BLOPB Length = 236 Score = 275 bits (704), Expect = 7e-73, Method: Composition-based stats. Identities = 166/224 (74%), Positives = 195/224 (87%), Gaps = 5/224 (2%) Query: 1 MDYTLTRI-DPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKL----NDMVNWGRKNSIW 55 M YTLT N E+++YPLQ+++IVTDPLE+ + +NVF GKL + +VNWGR NS+W Sbjct: 1 MKYTLTTARTDNSEDEQYPLQEKKIVTDPLEKNIQRNVFFGKLSAFLHKIVNWGRGNSLW 60 Query: 56 PYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYD 115 PYNFGLSCCYVEM T+FTA+HDVARFG+EVLRASPRQAD MV+AGT F KM PVIQRLYD Sbjct: 61 PYNFGLSCCYVEMTTAFTAIHDVARFGSEVLRASPRQADFMVIAGTPFLKMVPVIQRLYD 120 Query: 116 QMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 QMLEPKWVISMGACANSGGMYDIYSVVQGVDKF+PVD+YIPGCPPRPEAY+Q L+LL++S Sbjct: 121 QMLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDLYIPGCPPRPEAYIQGLLLLKKS 180 Query: 176 IGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDE 219 I +ERRPLSWV+GDQG+YR NM+SER+RKR RIA T L +PD+ Sbjct: 181 INEERRPLSWVLGDQGIYRKNMESERQRKRNTRIAETVLSSPDD 224 >UniRef50_B1KJU9 NADH-quinone oxidoreductase subunit B n=8 Tax=Proteobacteria RepID=NUOB_SHEWM Length = 213 Score = 246 bits (628), Expect = 4e-64, Method: Composition-based stats. Identities = 120/213 (56%), Positives = 160/213 (75%), Gaps = 7/213 (3%) Query: 15 DRYPLQKQEIV---TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTS 71 R+ L K EI+ T +++ V KN+ + +L D+V WGR NS+WP+NFGLSCCYVEM TS Sbjct: 1 MRWQLSKPEIIPTSTQTMQEVVEKNLLVTRLEDLVAWGRSNSLWPFNFGLSCCYVEMATS 60 Query: 72 FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN 131 FT+ HD+ARFG+EV+RA+PR+ADL+V++GT F KMAPVI+ LYDQMLEPKWVI MG+CAN Sbjct: 61 FTSRHDIARFGSEVIRATPREADLIVISGTVFLKMAPVIKHLYDQMLEPKWVICMGSCAN 120 Query: 132 SGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIG----KERRPLSWVV 187 SGGMYD+YSVVQG D+F+P+D+Y+PGCPPRPEA M L LLQE+I ++ RPL+ + Sbjct: 121 SGGMYDVYSVVQGADRFLPIDLYVPGCPPRPEALMYGLTLLQEAIKDGAPRQARPLNRTI 180 Query: 188 GDQGVYRANMQSERERKRGERIAVTNLRTPDEI 220 + + ++ R+ K +RI L PDE+ Sbjct: 181 TPEEIQAFACRNMRDEKHEQRIKADKLTPPDEV 213 >UniRef50_O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Eukaryota RepID=NDUS7_RECAM Length = 182 Score = 239 bits (609), Expect = 6e-62, Method: Composition-based stats. Identities = 81/167 (48%), Positives = 117/167 (70%), Gaps = 2/167 (1%) Query: 21 KQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVAR 80 K+EI ++ + K++++VNW RK S+WP FGL+CC VEM+ S + +D+ R Sbjct: 15 KKEIFMILNNKQNKTEFIVSKMDELVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLDR 74 Query: 81 FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IY 139 FG + R SPRQ+D+M+VAGT KMAP ++++YDQM EP+WV+SMG+CAN GG Y Y Sbjct: 75 FGI-IFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMSEPRWVVSMGSCANGGGYYHYSY 133 Query: 140 SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 SVV+G D+ +PVD+Y+PGCPP EA + L+ LQ+ I + R+ L W+ Sbjct: 134 SVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKRSRKTLYWL 180 >UniRef50_Q9DC70 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=57 Tax=cellular organisms RepID=NDUS7_MOUSE Length = 224 Score = 239 bits (609), Expect = 7e-62, Method: Composition-based stats. Identities = 77/151 (50%), Positives = 109/151 (72%), Gaps = 2/151 (1%) Query: 37 VFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLM 96 + KL+D++NW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQAD+M Sbjct: 73 YVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQADVM 131 Query: 97 VVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYI 155 +VAGT KMAP ++++YDQM EP++V+SMG+CAN GG Y YSVV+G D+ +PVD+Y+ Sbjct: 132 IVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYV 191 Query: 156 PGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 PGCPP EA + ++ LQ I +E++ W Sbjct: 192 PGCPPTAEALLYGILQLQRKIKREQKLKIWY 222 >UniRef50_A3PKI1 NADH-quinone oxidoreductase subunit B 2 n=6 Tax=Proteobacteria RepID=NUOB2_RHOS1 Length = 205 Score = 236 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 114/194 (58%), Positives = 143/194 (73%), Gaps = 1/194 (0%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 + E + + +L+D+V W RK+S+WP+NFGLSCCYVEM T+ T V+D ARFGAEV Sbjct: 10 AEAPEDRMAASHLFTRLDDLVAWSRKHSLWPFNFGLSCCYVEMATALTPVYDQARFGAEV 69 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGV 145 +R++PRQADL++V+GT F KMA + RLY QM EP+WVISMGACANSGGMYDIYSVVQGV Sbjct: 70 IRSTPRQADLLIVSGTVFRKMAVPLYRLYSQMREPRWVISMGACANSGGMYDIYSVVQGV 129 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVY-RANMQSERERK 204 D F+PVDVY+PGCPPRPEA M+AL+LLQ I E RPL +G+ G + R+ Sbjct: 130 DSFLPVDVYVPGCPPRPEALMEALVLLQSKIATEARPLQIRMGETGPARPFDPIPRRDAL 189 Query: 205 RGERIAVTNLRTPD 218 R R+AVT L P+ Sbjct: 190 REARMAVTRLADPE 203 >UniRef50_Q1IL91 NADH-quinone oxidoreductase subunit B 2 n=4 Tax=Bacteria RepID=NUOB2_ACIBL Length = 202 Score = 235 bits (600), Expect = 8e-61, Method: Composition-based stats. Identities = 89/191 (46%), Positives = 128/191 (67%), Gaps = 2/191 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E + KN + ++ + NW RK+S+WP FGL+CC +EM+T+ TA +D+ARFG+EV R Sbjct: 4 IENKFEKNFLLSSVDYVFNWARKSSVWPMTFGLACCAIEMITASTARYDIARFGSEVFRP 63 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 SPRQ+DLM+VAGT KMAPV+QR+Y+QM EPKWV++MGACA+ GG ++ Y+ +QGVDK Sbjct: 64 SPRQSDLMIVAGTVTLKMAPVVQRIYEQMPEPKWVMAMGACASVGGPFNTYATLQGVDKI 123 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESIGKE--RRPLSWVVGDQGVYRANMQSERERKRG 206 +PVDVY+ GCPPRPE L+ LQ+ I + + V D+ + +S R + G Sbjct: 124 VPVDVYVVGCPPRPENLFYGLLKLQDKIDHMTLAKRPTDVRLDETMLDEFRKSVRIAQAG 183 Query: 207 ERIAVTNLRTP 217 + + P Sbjct: 184 STVVIQPAAPP 194 >UniRef50_O75251 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=638 Tax=cellular organisms RepID=NDUS7_HUMAN Length = 213 Score = 235 bits (599), Expect = 1e-60, Method: Composition-based stats. Identities = 82/181 (45%), Positives = 113/181 (62%), Gaps = 6/181 (3%) Query: 11 NGENDRYPLQKQEIVTDPLEQEVNKN----VFMGKLNDMVNWGRKNSIWPYNFGLSCCYV 66 P Q + + + KL+D+VNW R++S+WP FGL+CC V Sbjct: 32 QSVATDGPSSTQPALPKARAVAPKPSSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAV 91 Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 EM+ +D+ RFG V RASPRQ+D+M+VAGT KMAP ++++YDQM EP++V+SM Sbjct: 92 EMMHMAAPRYDMDRFGV-VFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSM 150 Query: 127 GACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 G+CAN GG Y YSVV+G D+ +PVD+YIPGCPP EA + ++ LQ I +ERR W Sbjct: 151 GSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIW 210 Query: 186 V 186 Sbjct: 211 Y 211 >UniRef50_Q3A825 NADH-quinone oxidoreductase subunit B/C/D n=103 Tax=cellular organisms RepID=NUBCD_PELCD Length = 794 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 102/184 (55%), Positives = 135/184 (73%), Gaps = 4/184 (2%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 + + + KN+ + L+D +NWGRKNS+WP FGLSCC+VEM+ S T D+ARFGAEVLR Sbjct: 1 MSESIPKNIILTTLDDAINWGRKNSMWPMFFGLSCCFVEMMGSMTPRFDLARFGAEVLRG 60 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 +PR+ADLMV+AGT F KMA + R+Y++M PKWVI+MG+CANSGGMYD+YSV+QGV++ Sbjct: 61 TPREADLMVIAGTPFKKMAASMLRVYEEMANPKWVIAMGSCANSGGMYDVYSVMQGVNQV 120 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVV----GDQGVYRANMQSERERK 204 +PVDVYIPGCPPRPEA+MQ LM LQE I ++ P V+ G++G + + Sbjct: 121 LPVDVYIPGCPPRPEAFMQGLMTLQEKIARKESPARPVLNLRGGNEGTTVPILIDGSSKT 180 Query: 205 RGER 208 R R Sbjct: 181 RDTR 184 >UniRef50_Q1AVI4 NADH-quinone oxidoreductase subunit B n=15 Tax=Bacteria RepID=NUOB_RUBXD Length = 251 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 91/198 (45%), Positives = 127/198 (64%), Gaps = 10/198 (5%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +++ N+ + + NW RKNS+WP FGL+CC +EM+++ A +D+ RFGA Sbjct: 4 MQKFDEPNIITTSTDKLFNWARKNSLWPLQFGLACCAIEMMSTGMAHNDLERFGAGFFAG 63 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPRQAD+M+V+GT TKMA + RLY+QM EPKWVI+MGACA SGG + D YSV+ G D+ Sbjct: 64 SPRQADVMIVSGTVSTKMAERMTRLYEQMPEPKWVIAMGACAISGGPFLDGYSVLMGADR 123 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKE-----RRPLSWVVGDQGVYRANMQSERE 202 IPVDVY+PGCPPRPEA + +M LQ+ I +E +P +V ++G R + ERE Sbjct: 124 VIPVDVYVPGCPPRPEALIFGIMTLQKKIEREQQVGYEKPRPALVDEEGNIREYL-PERE 182 Query: 203 RKRGERIAVTNLRTPDEI 220 + +I+ P I Sbjct: 183 YR---QISEGKAHRPKGI 197 >UniRef50_A6LXQ4 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_CLOB8 Length = 169 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 86/152 (56%), Positives = 117/152 (76%), Gaps = 1/152 (0%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 +++++ KN+ + KL+D +N+ R +S WP FGL+CC +EM+ + A +D+ARFG EV Sbjct: 8 DKEIQEQIEKNIILTKLDDTLNYFRAHSFWPLTFGLACCAIEMMAAGGARYDIARFGYEV 67 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQG 144 RASPRQADLM+VAGT KMAP+++++YDQM EPKWVI+MG+CA SGG + D Y+VV G Sbjct: 68 FRASPRQADLMIVAGTITEKMAPIVKKIYDQMPEPKWVIAMGSCATSGGPFVDSYNVVPG 127 Query: 145 VDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 D F+PVDVYIPGCPPRPEA + L+ L+E I Sbjct: 128 ADTFLPVDVYIPGCPPRPEALIHGLLTLKEKI 159 >UniRef50_Q1IPE7 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_ACIBL Length = 213 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 88/164 (53%), Positives = 119/164 (72%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 ++ + + + L++ VNW RKNSIWP FGL+CC +EM++ + D+ARFGAEV R SP Sbjct: 50 EQPEEGIVLTTLDNAVNWIRKNSIWPMTFGLACCAIEMMSMGASRFDIARFGAEVFRPSP 109 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIP 150 RQ+DLM++AG KMAPVI+ LY QM EPKWVISMGACA SGG+++ Y++VQGV+++IP Sbjct: 110 RQSDLMIIAGRVSQKMAPVIRHLYLQMPEPKWVISMGACATSGGVFNNYALVQGVNQYIP 169 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 VD+Y+PGCPPRPE + A+ LLQE I ER + + V Sbjct: 170 VDIYVPGCPPRPEQLIYAITLLQEKIQAERGSFRRALNLEPVTP 213 >UniRef50_B5YKI3 NADH-quinone oxidoreductase subunit B 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=NUOB1_THEYD Length = 199 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 84/187 (44%), Positives = 125/187 (66%), Gaps = 6/187 (3%) Query: 25 VTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAE 84 + ++ N + L+ + +WGR +S+WP FGL+CC +EM+ + + +D+ RFG Sbjct: 14 IEQGIKIVPAANTIITTLDKIASWGRCSSLWPLTFGLACCAIEMMATAASHYDLDRFGI- 72 Query: 85 VLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQG 144 ++RA+PRQAD+M++AGT KMAPVI LY QM EP++VI+MG+CA SGG+++ YS VQG Sbjct: 73 IMRATPRQADVMIIAGTVTKKMAPVIVNLYHQMPEPRYVIAMGSCACSGGIFNTYSTVQG 132 Query: 145 VDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVG-----DQGVYRANMQS 199 VD+ +PVDVYIPGCPPRPEA ++ L+ LQE I E + + D+ R + +S Sbjct: 133 VDEILPVDVYIPGCPPRPEALIEGLLKLQEKIKTEPHKKTGCLSGVCLIDKSQRRCSYES 192 Query: 200 ERERKRG 206 R+ K+ Sbjct: 193 CRDNKKD 199 >UniRef50_B0TH78 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_HELMI Length = 175 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 81/154 (52%), Positives = 111/154 (72%), Gaps = 1/154 (0%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +++ + KN+ M L + NW R NS+WP + GL+CC +EM+ + + D+ARFG EV R Sbjct: 15 VDELIKKNIIMTSLEAVFNWARGNSLWPLSSGLACCAIEMMATGASRFDMARFGYEVFRP 74 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPRQADL+++AGT KMAP IQR+Y+QM EPKW+I+MG+CA +GG + D Y+VV GVDK Sbjct: 75 SPRQADLIIIAGTLTWKMAPAIQRVYEQMPEPKWIIAMGSCACTGGPFADSYAVVPGVDK 134 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 IPVDVY+PGCPPRPEA + + L+ I + Sbjct: 135 VIPVDVYVPGCPPRPEALLDGFLKLKAKIQNPAK 168 >UniRef50_A6L170 NADH-quinone oxidoreductase subunit B n=35 Tax=Bacteroidales RepID=NUOB_BACV8 Length = 198 Score = 229 bits (584), Expect = 4e-59, Method: Composition-based stats. Identities = 83/150 (55%), Positives = 108/150 (72%), Gaps = 1/150 (0%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 E V +G L+D++NWGR NS+WP F SCC +E + A +D ARFG EV RASPR Sbjct: 31 EGGTKVLVGCLDDLINWGRSNSLWPLTFATSCCGIEFMAVGAARYDFARFGFEVARASPR 90 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIP 150 QAD+++VAGT KMAPV++RLYDQM +PK+VI++G CA SGG + Y V+ GVDK +P Sbjct: 91 QADMIMVAGTITHKMAPVLKRLYDQMADPKYVIAVGGCAISGGPFKKSYHVLNGVDKILP 150 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VDVYIPGCPPRPEA + ++ LQ + E+ Sbjct: 151 VDVYIPGCPPRPEALLYGMIQLQRKVKLEK 180 >UniRef50_C1A8Z3 NADH-quinone oxidoreductase chain B n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8Z3_GEMAT Length = 212 Score = 229 bits (583), Expect = 7e-59, Method: Composition-based stats. Identities = 82/197 (41%), Positives = 119/197 (60%), Gaps = 7/197 (3%) Query: 27 DPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL 86 ++ + +L+ +VNWGR S+WP FG +CC +E + + + D++RFG E L Sbjct: 16 THVDAGGHDGWITTRLDFLVNWGRAGSLWPMPFGTACCAIEFMATAASRFDLSRFGMERL 75 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVD 146 SPRQAD+++ AG K+APV++R+Y QM +PKWVISMGACA++GGM+D Y+VVQG+D Sbjct: 76 SYSPRQADVLLCAGRVPLKLAPVLRRIYQQMPQPKWVISMGACASTGGMFDNYAVVQGID 135 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVY-------RANMQS 199 IPVDVY+PGCPPRPEA M A+++LQ+ + +ER S + + Sbjct: 136 TIIPVDVYVPGCPPRPEALMHAIIMLQKKVMQERLKDSTRHVEIDPDPTSQLYIPPSRID 195 Query: 200 ERERKRGERIAVTNLRT 216 E G + T Sbjct: 196 ELSEPFGNSVHQTRSAP 212 >UniRef50_C9RJJ6 NADH-quinone oxidoreductase, B subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJJ6_FIBSS Length = 211 Score = 226 bits (577), Expect = 4e-58, Method: Composition-based stats. Identities = 79/191 (41%), Positives = 123/191 (64%), Gaps = 4/191 (2%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 + N+ L+ +VNWGR NS+WP+ +G +CC +E +++ +D++R G+E +R + Sbjct: 3 NEAEKPNIITSSLDFLVNWGRSNSLWPFPYGTACCAIEFMSTEVGRYDLSRIGSEYVRFT 62 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQ+D+++VAGT K AP+++R+Y+QM EP+WVI+MGACA+SGG YD Y V G+D I Sbjct: 63 PRQSDVLLVAGTITYKQAPILKRIYEQMAEPRWVIAMGACASSGGFYDCYCTVPGIDHII 122 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKE----RRPLSWVVGDQGVYRANMQSERERKR 205 PVDVYI GCPPRPEA+ A+ LQ+ + E +R S + + +++RE Sbjct: 123 PVDVYIGGCPPRPEAFFDAMFDLQKKVKDESFMKQRAESVKEQLEMIKVKTAEAKREAAA 182 Query: 206 GERIAVTNLRT 216 R V +++ Sbjct: 183 CAREKVVDIKD 193 >UniRef50_Q8DKZ4 NAD(P)H-quinone oxidoreductase subunit K n=21 Tax=cellular organisms RepID=NDHK_THEEB Length = 237 Score = 226 bits (576), Expect = 4e-58, Method: Composition-based stats. Identities = 81/169 (47%), Positives = 110/169 (65%), Gaps = 3/169 (1%) Query: 13 ENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSF 72 N P I + QE+ +N+ + LND+ +W R +S+WP +G +CC++E Sbjct: 2 TNTTSPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMI 61 Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 + D RFG V R SPRQADL++ +GT KMAP + RLY+QM PK+VI+MGAC + Sbjct: 62 GSRFDFDRFGL-VPRNSPRQADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTIT 120 Query: 133 GGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 GGM+ D YS V+GVDK IPVDVY+PGCPPRPEA M A++ L++ I E Sbjct: 121 GGMFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIVKLRKKIANE 169 >UniRef50_D2R6Y4 NADH-quinone oxidoreductase, B subunit n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R6Y4_9PLAN Length = 227 Score = 226 bits (575), Expect = 5e-58, Method: Composition-based stats. Identities = 81/154 (52%), Positives = 108/154 (70%), Gaps = 2/154 (1%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 +E V +NVF + +NW R++SIWP FGL+CC +EM+ + + +D+ RFGA RA Sbjct: 26 IEARVEENVFTTSVEQAINWARQSSIWPMTFGLACCAIEMMAAGASRYDMDRFGAGAFRA 85 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVD 146 +PRQADLM+VAGT KMA ++RLY+ M +PK+VI+MGAC GG Y Y VV+GVD Sbjct: 86 TPRQADLMIVAGTVTYKMASRVRRLYNMMPDPKFVIAMGACTVGGGPYFKWGYHVVKGVD 145 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +PVDVYIPGCPPRPEA ++ LM +Q+ I R Sbjct: 146 LVVPVDVYIPGCPPRPEALLEGLMRIQDKIKGHR 179 >UniRef50_C9RKY2 NADH-quinone oxidoreductase, B subunit n=2 Tax=cellular organisms RepID=C9RKY2_FIBSS Length = 419 Score = 226 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 87/207 (42%), Positives = 122/207 (58%), Gaps = 10/207 (4%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFG 82 + L+ + ++ +VNW R NSIWP +G SCC +EM++S A +D+ARFG Sbjct: 5 NLAPKILDPIPGGKYVVNAIDYVVNWARANSIWPLTYGTSCCAIEMMSSSMARYDIARFG 64 Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYS 140 +EV R+SPRQADL ++AGT +MAP IQ L++Q+ PK+VI+MGAC SGG + D YS Sbjct: 65 SEVFRSSPRQADLFILAGTITRRMAPAIQMLWEQIPGPKYVIAMGACTISGGPFIYDNYS 124 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQG--------V 192 VV+G IPVDV++PGCPPRPEA L+ L+E I KE W G+ Sbjct: 125 VVRGAQNLIPVDVFVPGCPPRPEALFHGLLTLREKILKETCRNPWHEGEPKDVSTMDRYR 184 Query: 193 YRANMQSERERKRGERIAVTNLRTPDE 219 A + E + E++A + +E Sbjct: 185 EAAKTWAALEEMKDEQMAEARAKFKEE 211 >UniRef50_Q1IZX2 NADH-quinone oxidoreductase subunit B n=16 Tax=cellular organisms RepID=NUOB_DEIGD Length = 178 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 85/159 (53%), Positives = 119/159 (74%) Query: 21 KQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVAR 80 +E+ ++ ++ V L +V WGR NS+WP FGL+CC +EM++S +D++R Sbjct: 3 LKELFDRDWQELESEGVLFSTLEKLVAWGRSNSLWPATFGLACCAIEMMSSTDGRNDLSR 62 Query: 81 FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYS 140 FG+EV RASPRQAD+M+VAG KMAP+++R+YDQM +PKWVISMGACA+SGGM++ Y+ Sbjct: 63 FGSEVFRASPRQADVMIVAGRLSKKMAPIMRRVYDQMPDPKWVISMGACASSGGMFNNYA 122 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 VVQ VD +PVDV++PGCPPRPEA + A+M LQ+ + E Sbjct: 123 VVQNVDHVVPVDVFVPGCPPRPEALIYAVMQLQKKVRGE 161 >UniRef50_Q0BSK3 NADH-quinone oxidoreductase subunit B n=31 Tax=cellular organisms RepID=NUOB_GRABC Length = 194 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 83/163 (50%), Positives = 113/163 (69%), Gaps = 3/163 (1%) Query: 18 PLQKQEIVTDPLEQEV-NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVH 76 P QE V + E+ +K + L+ +VNW R S+WP FGL+CC VEM+ ++ + Sbjct: 26 PGPGQEAVLRGITGEMADKGFVVANLDKLVNWARTGSLWPMTFGLACCAVEMIHAYMPRY 85 Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG + RASPRQ+D+M+VAGT KMAP ++R+YDQM EP+WVISMG+CAN GG Y Sbjct: 86 DLDRFGV-IPRASPRQSDVMIVAGTLTNKMAPALRRVYDQMPEPRWVISMGSCANGGGYY 144 Query: 137 D-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 YSVV+G D+ +PVDVY+PGCPP EA + +M LQ+ I + Sbjct: 145 HYSYSVVRGCDRIVPVDVYVPGCPPTAEALVYGIMQLQKKIRR 187 >UniRef50_B6YR59 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteroidales RepID=NUOB_AZOPC Length = 191 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 78/145 (53%), Positives = 101/145 (69%), Gaps = 1/145 (0%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 N+ + KLND++NWGR NS+WP F SCC +E + A +D ARFG EV R SPRQA Sbjct: 23 GANIAIAKLNDLINWGRSNSVWPLTFATSCCGIEFMCLGAARYDFARFGWEVTRNSPRQA 82 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVD 152 D++ GT KMAPV++RLYDQM EPK+VI++G+CA SGG + Y + G+DK IPVD Sbjct: 83 DVVFCCGTIVHKMAPVLKRLYDQMSEPKYVIALGSCAISGGPFKSSYHTIMGIDKIIPVD 142 Query: 153 VYIPGCPPRPEAYMQALMLLQESIG 177 VYIPGCPPRP+A + ++ L I Sbjct: 143 VYIPGCPPRPDAMIYGMIQLARKIK 167 >UniRef50_D2R5G9 NADH-quinone oxidoreductase, B subunit n=2 Tax=Planctomycetaceae RepID=D2R5G9_9PLAN Length = 192 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 89/176 (50%), Positives = 126/176 (71%), Gaps = 6/176 (3%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 ++ +NV + KL+++ NW RKNS+WP F +CC +E++ + + HD+ARFGAEV R SPR Sbjct: 4 DLPENVMVTKLDELANWCRKNSLWPMPFATACCGIELMATGASRHDLARFGAEVFRFSPR 63 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPV 151 Q DLM+VAG KM PV+QR++ QM EPKW ISMGACA++GG++D Y+VVQG+D+FIPV Sbjct: 64 QCDLMIVAGRVVMKMLPVLQRIWQQMHEPKWCISMGACASTGGVFDTYAVVQGIDRFIPV 123 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGE 207 D+Y+PGCPPRPE QA++ LQ+ I +E + G++ + ER+R E Sbjct: 124 DMYVPGCPPRPEQLTQAIIDLQDKIQRE----GTITGEEF--ETAARQERKRALQE 173 >UniRef50_A5UXK1 NADH-quinone oxidoreductase subunit B 1 n=13 Tax=Bacteria RepID=NUOB1_ROSS1 Length = 268 Score = 221 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 90/165 (54%), Positives = 116/165 (70%), Gaps = 1/165 (0%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 + VF+ + NWGR++SIWP +FGL+CC +EM+ + A D+ARFGAE+ RASP Sbjct: 10 EAEKHGVFLTTMQRFYNWGRRSSIWPLSFGLACCAIEMMATGLARFDLARFGAEMFRASP 69 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFI 149 RQADLM+VAGT KMAP + RLY+QM EP++VISMGACA SGG + D Y+V++G+D I Sbjct: 70 RQADLMIVAGTVTKKMAPQVVRLYNQMPEPRYVISMGACATSGGPFRDGYNVLRGIDLLI 129 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 PVDVYIPGCPPRPEA + ALM LQ+ I +R G + Sbjct: 130 PVDVYIPGCPPRPEALLHALMTLQKQIDAQRLNQVRWYGKREAKE 174 >UniRef50_C1ZCK3 NADH dehydrogenase subunit B n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZCK3_PLALI Length = 225 Score = 218 bits (556), Expect = 9e-56, Method: Composition-based stats. Identities = 79/179 (44%), Positives = 114/179 (63%), Gaps = 2/179 (1%) Query: 20 QKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVA 79 + +E +N+ + L +NWG+ +S+WP FG++CC +EM+ + + +D+ Sbjct: 19 PLPSAGSPWIEGRFEENLIVTTLEQAMNWGQLSSVWPLTFGIACCAMEMMATGMSKYDLD 78 Query: 80 RFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY--D 137 RFG+ RA+PRQADLM+VAGT KMA I+RLYDQM +PK+VI+MGAC GG Y Sbjct: 79 RFGSGAFRATPRQADLMIVAGTVTYKMASRIRRLYDQMPDPKYVIAMGACTIGGGPYFKY 138 Query: 138 IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRAN 196 Y VV+GVD +PVDVYIPGCPPRPEA ++ +M +Q+ I + + V +R+ Sbjct: 139 GYHVVKGVDLVVPVDVYIPGCPPRPEALLEGVMRIQDKIRARKLGRNTVSQLPVPHRSG 197 >UniRef50_B1ZUJ0 NADH-quinone oxidoreductase subunit B 2 n=13 Tax=Bacteria RepID=NUOB2_OPITP Length = 191 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 89/187 (47%), Positives = 123/187 (65%), Gaps = 5/187 (2%) Query: 8 IDPNGENDRYPLQKQ--EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCY 65 + P+ + P T + EV++ KL+D++ GR NS+WP FGL+CC Sbjct: 5 LTPSAQPAPMPSLVAATGPSTPEIPPEVSQIARFAKLDDLLALGRANSLWPLTFGLACCA 64 Query: 66 VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVIS 125 +EM+ + A D++RFGAEV R SPRQAD+M+VAGT KMAP ++ LYDQMLEPKWVI+ Sbjct: 65 IEMMAAGMARFDISRFGAEVFRPSPRQADVMIVAGTVNKKMAPAVKLLYDQMLEPKWVIA 124 Query: 126 MGACANSGGMY---DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRP 182 MG CA SGG + Y+VV+GVD+ PVDVY+PGCPPRPEA ++ ++ L+E I +RR Sbjct: 125 MGQCAISGGPFKYPGQYAVVEGVDQLFPVDVYVPGCPPRPEALIEGILKLEEKITGKRRF 184 Query: 183 LSWVVGD 189 + + Sbjct: 185 PVAQLKE 191 >UniRef50_Q0RRW7 NADH-quinone oxidoreductase subunit B n=5 Tax=Bacteria RepID=NUOB_FRAAA Length = 281 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 82/167 (49%), Positives = 116/167 (69%) Query: 28 PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR 87 LE+++ V + + + NW R++S+WP FGL+CC +EM+++ +D++RFG EV R Sbjct: 2 GLEEKLPGGVLLASVEKLANWSRRSSLWPATFGLACCAIEMMSTGAGRYDLSRFGMEVFR 61 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDK 147 ASPRQADLM+VAG KMAPV++++YDQM EPKWV+SMG CA+SGGM++ Y++VQGVD Sbjct: 62 ASPRQADLMIVAGRVSQKMAPVLRQIYDQMPEPKWVLSMGVCASSGGMFNNYAIVQGVDH 121 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 +PVD+Y+PGCPPRPE M A++ L E I + G Sbjct: 122 IVPVDMYLPGCPPRPEMLMDAIIKLHEKILAGPVTGRTAHTESGSSP 168 >UniRef50_B1ZRT2 NADH-quinone oxidoreductase subunit B 1 n=4 Tax=Bacteria RepID=NUOB1_OPITP Length = 171 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 82/155 (52%), Positives = 109/155 (70%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 + + + K + ++NW R NS+WP GL+CC +E++ D+ARFGAEV+R S Sbjct: 11 SSAIEGGIVVSKADAVINWIRTNSMWPMPMGLACCAIELMQVGNGRFDIARFGAEVMRFS 70 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQ+D M+VAG+ KMAP I+R+YDQM+ PKWVI+MGACA+SGGMY Y+ +QGVD+ + Sbjct: 71 PRQSDCMIVAGSVTYKMAPQIRRIYDQMMSPKWVIAMGACASSGGMYRSYAHMQGVDRIL 130 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLS 184 PVDVYI GCPPRPE + ALM LQ I ER + Sbjct: 131 PVDVYISGCPPRPEGILDALMKLQAKIRTERAGQN 165 >UniRef50_B3QY47 NADH-quinone oxidoreductase subunit B 2 n=8 Tax=Bacteria RepID=NUOB2_CHLT3 Length = 195 Score = 217 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 80/181 (44%), Positives = 115/181 (63%), Gaps = 8/181 (4%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 ++ V + +++NW R +S+WP FGL+CC +EM+ + + +D+ RFG R+S Sbjct: 6 QKFDKGGVVITAAENVLNWARLSSLWPMGFGLACCAIEMMATNASNYDLERFGI-FPRSS 64 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD--IYSVVQGVDK 147 PRQ+DLM+VAGT KMA + RLY+QM EP++V+SMG+C+N GG Y Y VV+GVD+ Sbjct: 65 PRQSDLMIVAGTVTFKMAERVVRLYEQMPEPRYVLSMGSCSNCGGPYWEHGYHVVKGVDR 124 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKE-----RRPLSWVVGDQGVYRANMQSERE 202 IPVDVY+PGCPPRPEA + LM +QE I +E RR + + V ++ E Sbjct: 125 IIPVDVYVPGCPPRPEALIGGLMKVQELIREEKFAGDRREAIERLKPKKVKAEDVIVETS 184 Query: 203 R 203 Sbjct: 185 A 185 >UniRef50_Q3ZXS0 NADH-quinone oxidoreductase subunit B n=5 Tax=Dehalococcoides RepID=NUOB_DEHSC Length = 200 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 83/164 (50%), Positives = 111/164 (67%), Gaps = 1/164 (0%) Query: 18 PLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHD 77 + +E VF+ + ++NW R S+WP FGL+CC +EM+ + D Sbjct: 33 TSPYPDPADWLNGEEPPPGVFITSVEKVLNWSRHYSLWPVMFGLACCAIEMMCMAASRWD 92 Query: 78 VARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY- 136 +ARFG ++ RASPRQADLM+VAGT KMAP ++R+YDQM EPKWV++MGAC SGG++ Sbjct: 93 LARFGMDIFRASPRQADLMIVAGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGGLFR 152 Query: 137 DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 D YSVV G + +PVDVY+PGCPPRPEA M+A+M + E I K R Sbjct: 153 DSYSVVPGFNLVVPVDVYVPGCPPRPEALMRAIMDIHEKIDKTR 196 >UniRef50_B4U8H3 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_HYDS0 Length = 177 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 67/165 (40%), Positives = 108/165 (65%), Gaps = 1/165 (0%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 ++++++WGR+N++WP GL+CC +EM+ + + D+ R G + RASPRQA Sbjct: 7 GNGFITTTVDELLSWGRRNALWPVTIGLACCAIEMMHAAASRFDIDRLGM-IFRASPRQA 65 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 D+++VAGT K+AP+++ ++DQM EPKW ISMG CA++GG + YS +QG+D+ IPVDV Sbjct: 66 DVLIVAGTVVNKVAPMLKLVWDQMPEPKWCISMGGCASAGGPFPTYSTLQGIDRIIPVDV 125 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 YIPGCPP P+ + L+ LQ I +++ ++ + + Sbjct: 126 YIPGCPPTPQGLIYGLLELQRKIREKKVTRYEKAFEEFKKDLSPE 170 >UniRef50_C7PSH0 NADH-quinone oxidoreductase, B subunit n=4 Tax=Sphingobacteriales RepID=C7PSH0_CHIPD Length = 187 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 72/151 (47%), Positives = 108/151 (71%) Query: 29 LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRA 88 E + F + ++ RKNSIWP F SCC +E + + + +D++RFG+E + Sbjct: 17 PEGYSGEGFFATTFDQVIGLARKNSIWPLPFATSCCGIEFMATMASTYDMSRFGSERMAF 76 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF 148 +PRQ DL++V GT KMAPV++++Y QM EP+WV+++GACA+SGG++D YSV+QG+D+ Sbjct: 77 TPRQCDLLMVMGTISKKMAPVLRQVYLQMAEPRWVVAVGACASSGGVFDTYSVLQGIDQV 136 Query: 149 IPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 IPVDVY+PGCPPRPEA + M +Q+ +G+E Sbjct: 137 IPVDVYVPGCPPRPEAIIDGFMRVQDLVGQE 167 >UniRef50_B8HLE8 NAD(P)H-quinone oxidoreductase subunit K 2 n=94 Tax=cellular organisms RepID=NDHK2_CYAP4 Length = 259 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 73/163 (44%), Positives = 109/163 (66%), Gaps = 3/163 (1%) Query: 19 LQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDV 78 + I + + E+++N+ + L+D+ NW R +SI+P +G +CC++E + D+ Sbjct: 8 SIRNPISSAEVPPELSENIILTSLDDIYNWARISSIYPLMYGTACCFIEFAAMIASRFDM 67 Query: 79 ARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-- 136 RFG RASPRQADL+++AGT +MA +RLYDQM EPK+VI+MGAC +GGM+ Sbjct: 68 ERFGM-FPRASPRQADLIILAGTLTMQMAVPTRRLYDQMPEPKYVIAMGACMITGGMFSA 126 Query: 137 DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 D + ++G DK +P+DVYIPGCPPRPEA + A+ L++ I E Sbjct: 127 DSPTALRGADKLLPIDVYIPGCPPRPEAILDAVTKLRKKIANE 169 >UniRef50_A9GUX6 NADH-quinone oxidoreductase subunit B 1 n=10 Tax=Bacteria RepID=NUOB1_SORC5 Length = 194 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 112/190 (58%) Query: 21 KQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVAR 80 K + + + +++ ++NW +K S++ Y F +CC +E + + D+AR Sbjct: 5 KAGGPSTRVMEGSEHGFATTRVDALLNWAKKYSLFQYPFVTACCGMEYMAMASPRFDMAR 64 Query: 81 FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYS 140 FGAEV R SPRQADL+ V GT + AP ++R+Y+QM +PKWV++ G CA+ GG YD Y+ Sbjct: 65 FGAEVPRFSPRQADLLWVVGTISQRQAPALKRIYEQMADPKWVLAFGTCASCGGFYDNYT 124 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 V G+DK IP DVY+PGCPPRPEA + LMLLQ+ I + R + V + + Sbjct: 125 TVAGIDKVIPCDVYVPGCPPRPEAVLDGLMLLQDKIARGDRTPAIVKPREDPAQTTEHLV 184 Query: 201 RERKRGERIA 210 +++ + Sbjct: 185 TLQRKERSLP 194 >UniRef50_A3THJ2 NADH dehydrogenase beta subunit n=2 Tax=Bacteria RepID=A3THJ2_9MICO Length = 198 Score = 212 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 79/153 (51%), Positives = 108/153 (70%) Query: 28 PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR 87 LE+++ + L + + RK SIWP FGL+CC +EM+ T +D+ARFG E Sbjct: 2 GLEEKLPAGFVLTTLESVAGYMRKASIWPATFGLACCAIEMMAVGTPDYDIARFGMERFS 61 Query: 88 ASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDK 147 A+PRQADLM+VAG KMAPV++++YDQM PKWVISMG CA+SGGM++ Y++VQGVD Sbjct: 62 ATPRQADLMIVAGRVSNKMAPVVRQVYDQMPNPKWVISMGVCASSGGMFNNYAIVQGVDH 121 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 IPVD+Y+PGCPPRPE + A++ L + I + Sbjct: 122 IIPVDIYLPGCPPRPEMLLNAIIELHDQIQNSK 154 >UniRef50_B1W4V9 NADH-quinone oxidoreductase subunit B 2 n=27 Tax=Bacteria RepID=NUOB2_STRGG Length = 235 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 87/215 (40%), Positives = 121/215 (56%), Gaps = 7/215 (3%) Query: 5 LTRIDPNGENDRYPLQKQEIVTDPLEQ-EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSC 63 +R P P ++ ++ V + + ++NWGR+ S+W +NFGL+C Sbjct: 4 TSRPTPASRQPASPPPADPVLLPEPKRLGVLSRLAPEPMKVVLNWGRRYSLWVFNFGLAC 63 Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWV 123 C +E + + A HD R G PRQADLM+V+GT KMAP ++RLY+QM EPK+V Sbjct: 64 CAIEFIAASMARHDFIRLGVIPFAPGPRQADLMIVSGTVTDKMAPAVKRLYEQMPEPKYV 123 Query: 124 ISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRP 182 IS GAC+N GG Y D YSV +GVD+ IPVDVY+PGCPPRPEA +Q ++ LQE I +E Sbjct: 124 ISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIARESLA 183 Query: 183 LSWVVGDQGVYRANMQSERERKRGERIAVTNLRTP 217 + G G + + R +A P Sbjct: 184 ERYATGATGGGPS-----TDALRSGLVAAPTAPGP 213 >UniRef50_C1VB41 NADH dehydrogenase subunit B n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1VB41_9EURY Length = 236 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 121/196 (61%), Gaps = 8/196 (4%) Query: 7 RIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYV 66 R+ +G ++R+ + +E + K ++ +NW R +S++ FG++CC + Sbjct: 24 RMTGSGADNRFNSKLREAFGSSP-------FILTKFDNFMNWVRGSSMFMLQFGIACCSI 76 Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 EM+ +++ HD+ RF A V RASPRQAD+++V GT +K AP ++R+YDQM EPK+V+ M Sbjct: 77 EMMHTYSVKHDLDRFAAGVPRASPRQADVIIVPGTIVSKFAPRMKRVYDQMPEPKFVVGM 136 Query: 127 GACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 G+C SGG + + Y+V++G ++ IPVD+++PGCPPRPEA + + LQ+ I + Sbjct: 137 GSCTVSGGPFQEGYNVIKGAEEVIPVDIHVPGCPPRPEALIYGVAKLQQRIAEGESSPVT 196 Query: 186 VVGDQGVYRANMQSER 201 V + +++ + Sbjct: 197 VKPYELEQFGDLEQDE 212 >UniRef50_UPI00016C3AA7 NADH-quinone oxidoreductase, B subunit n=2 Tax=Bacteria RepID=UPI00016C3AA7 Length = 201 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 80/178 (44%), Positives = 118/178 (66%), Gaps = 4/178 (2%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 + + + L+ + N RK+S+WP F +CC +E++ + ++ +D+ARFG+E +R SP Sbjct: 4 TNMLPDFMIAPLDYLANMARKHSLWPMPFATACCGIELMATASSRYDIARFGSEAMRFSP 63 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIP 150 RQ D+M+VAG KM PV+QR++ QM EPKW ISMGACA+SGG++D Y+VVQG+D+FIP Sbjct: 64 RQCDVMIVAGRVAMKMVPVMQRIWLQMPEPKWCISMGACASSGGVFDTYAVVQGIDRFIP 123 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGK----ERRPLSWVVGDQGVYRANMQSERERK 204 VDVY+PGCPPRPE ++A++ LQE I K + R + +G + E Sbjct: 124 VDVYVPGCPPRPEQLIRAVLDLQEKIQKTGTIDAREFASRTAYEGPTALARELGAEEA 181 >UniRef50_C5GDP9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Ajellomyces dermatitidis RepID=C5GDP9_AJEDR Length = 245 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 78/165 (47%), Positives = 109/165 (66%), Gaps = 3/165 (1%) Query: 24 IVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGA 83 ++ E+ F+G ++ + NWGR+ S+WP + GL+CC +EM+ +D R G Sbjct: 80 LLPSQDEKTGTMGHFLGSIDAVANWGRQASLWPISLGLACCGLEMMAVSMPRYDQDRLG- 138 Query: 84 EVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVV 142 + RASPRQ+DL++VAGT KMAP ++ +YDQM +PKWVISMG+CAN GG Y YSVV Sbjct: 139 TIFRASPRQSDLLIVAGTVTNKMAPALRLVYDQMPDPKWVISMGSCANGGGYYHYSYSVV 198 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES-IGKERRPLSWV 186 +GVD+ +PVDVY+PGCPP EA M A+ +++ I K R W Sbjct: 199 RGVDRLLPVDVYLPGCPPTAEALMYAISVVRRKLIVKSRTTRIWY 243 >UniRef50_A9G9S9 NADH-quinone oxidoreductase subunit B 2 n=2 Tax=Myxococcales RepID=NUOB2_SORC5 Length = 182 Score = 209 bits (531), Expect = 6e-53, Method: Composition-based stats. Identities = 81/174 (46%), Positives = 113/174 (64%), Gaps = 11/174 (6%) Query: 10 PNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMV 69 P G +Y ++T ++Q VN ++NWGR NS+W FGL+CC +E++ Sbjct: 11 PRGWEAKYESDGGGVITTSVDQTVNW---------LLNWGRSNSVWYMLFGLACCAIELM 61 Query: 70 TSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGAC 129 + D+ RFGA R SPR +DL ++AGT KMA ++RLYDQM EP++VISMG+C Sbjct: 62 QTGGPRGDLERFGAA-PRPSPRSSDLFIIAGTLTYKMATRVKRLYDQMSEPRFVISMGSC 120 Query: 130 ANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRP 182 +N GG++ YSV +GVD+ IPVDVY+PGCPPRPEA ++ L+ +QE I ER Sbjct: 121 SNCGGLFQYAYSVCKGVDQIIPVDVYVPGCPPRPEALLEGLLKIQEKIKSERAL 174 >UniRef50_B0SFT5 NADH-quinone oxidoreductase subunit B n=13 Tax=cellular organisms RepID=NUOB_LEPBA Length = 186 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 78/163 (47%), Positives = 114/163 (69%), Gaps = 3/163 (1%) Query: 37 VFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLM 96 + L+++V WG+ S+WPY F +CC +E +++ A +D+ARFGAE SPRQAD++ Sbjct: 18 FQVATLDNVVQWGQSFSLWPYPFATACCGIEYMSTACADYDIARFGAERPSFSPRQADMI 77 Query: 97 VVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIP 156 +V GT KMAPV++++YDQ+ EPK+VIS+GACA+SGGM+ Y V+QGVD+ +PVDVY+P Sbjct: 78 LVLGTITYKMAPVLRQIYDQLAEPKFVISVGACASSGGMFHTYGVLQGVDRILPVDVYVP 137 Query: 157 GCPPRPEAYMQALMLLQESIGK---ERRPLSWVVGDQGVYRAN 196 GCPPRPEA + AL+ LQ+ + E R + + + N Sbjct: 138 GCPPRPEAILDALVKLQKKVQSQGLEARRQEVMRKIEEINERN 180 >UniRef50_B0R3U2 NADH dehydrogenase-like complex subunit B n=11 Tax=Halobacteriaceae RepID=B0R3U2_HALS3 Length = 235 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 74/193 (38%), Positives = 118/193 (61%), Gaps = 8/193 (4%) Query: 10 PNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMV 69 +G +DR+ + +E + K + +NW R +S++ FG++CC +EM+ Sbjct: 26 GDGVDDRFNSRLREAFGSTP-------FILTKFDKFMNWVRGSSMFMLQFGIACCSIEMM 78 Query: 70 TSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGAC 129 +++ HD+ RF A V RASPRQAD+M+V GT +K AP ++R+YDQM EPK+V++MG C Sbjct: 79 HTYSVKHDLDRFHAGVPRASPRQADVMIVPGTIVSKFAPRMKRVYDQMPEPKFVVNMGNC 138 Query: 130 ANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVG 188 + SGG + + Y+VV+G ++ IPVD++IPGCPPRPEA + + LQE I V Sbjct: 139 STSGGPFQEGYNVVKGAEEVIPVDIHIPGCPPRPEALVYGVAKLQERIANGESSPVTVKP 198 Query: 189 DQGVYRANMQSER 201 + +++ + Sbjct: 199 YELEEFGDLERDE 211 >UniRef50_A4J659 NADH-quinone oxidoreductase subunit B n=34 Tax=Firmicutes RepID=NUOB_DESRM Length = 196 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 85/166 (51%), Positives = 111/166 (66%), Gaps = 2/166 (1%) Query: 13 ENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVE-MVTS 71 + K+ + EV + V +G L ++N R NS+WP FGL+CC +E ++ + Sbjct: 19 YEETVKRLKKLGAEPAVIGEVARTVSVGPLEKLLNLARANSLWPMGFGLACCAIEGLMAA 78 Query: 72 FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN 131 A D+ARFG EV+RASPRQAD+M+V GT K AP + RLY+QM EPK+VI+MG+CA Sbjct: 79 NMARFDLARFGYEVMRASPRQADVMLVCGTVTKKAAPFVVRLYEQMAEPKYVIAMGSCAI 138 Query: 132 SGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 SGG + D YSVV GVDK IPVDVYIPGC PRP+A + M L+E I Sbjct: 139 SGGPFVDSYSVVPGVDKLIPVDVYIPGCAPRPDAVIHGFMKLKEKI 184 >UniRef50_Q1D8S3 NADH-quinone oxidoreductase subunit B n=2 Tax=Cystobacterineae RepID=NUOB_MYXXD Length = 187 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 76/161 (47%), Positives = 109/161 (67%), Gaps = 2/161 (1%) Query: 19 LQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDV 78 IVT ++ + ++ + W RK S++ Y + +CC +E ++ + HD+ Sbjct: 4 ADLANIVTTRRDESMGW--LQSIVSKGLGWARKYSLFTYPYATACCGMEYMSVAASRHDI 61 Query: 79 ARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI 138 +RFGAE R SPRQADL++V GT K AP+++R+Y+QM EPKWV++ G CA+SGG YD Sbjct: 62 SRFGAEFPRFSPRQADLLMVVGTINLKQAPILKRVYEQMAEPKWVVAFGVCASSGGFYDN 121 Query: 139 YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 Y+V+QG+D+ IPVDVYIPGCPPRPE + LMLLQ+ IG + Sbjct: 122 YAVLQGIDRIIPVDVYIPGCPPRPEQVLDGLMLLQDKIGNQ 162 >UniRef50_Q2S5J2 NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=NUOB_SALRD Length = 213 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 82/180 (45%), Positives = 114/180 (63%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS 89 + F +++ +NW R NS+ P GL+CC +EM+ +D ARFG+E +R S Sbjct: 5 SGTNGQGFFTTRVDTFLNWARSNSLMPMPMGLACCAIEMMGFAGPKYDSARFGSEAMRFS 64 Query: 90 PRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFI 149 PRQADLM+VAG C KM+ I+R++DQM +PKW I+MGACA++GGM+ Y VVQGVD F+ Sbjct: 65 PRQADLMIVAGWCSYKMSHAIRRVWDQMGDPKWCIAMGACASTGGMHRCYGVVQGVDNFL 124 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERI 209 PVDVYI GCPPRPE+ + ALM +QE I E + + RA + E + ++ Sbjct: 125 PVDVYISGCPPRPESVLHALMDIQEKIRNEYSVVQDYEFGKARERAPIMPENTNRFPGQL 184 >UniRef50_C0QR84 NADH-quinone oxidoreductase chain b (Nadh dehydrogenasei, chain b) (Ndh-1, chain b) n=1 Tax=Persephonella marina EX-H1 RepID=C0QR84_PERMH Length = 181 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 67/172 (38%), Positives = 114/172 (66%), Gaps = 3/172 (1%) Query: 34 NKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 N + + + ++++WGR+NS+WP + GL+CC +EM+ + + D R G + R SPRQ+ Sbjct: 6 NNGIILTTVEEVLSWGRRNSLWPASVGLACCAIEMMHTAASRFDTDRLGI-IFRGSPRQS 64 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDV 153 D+++VAGT K+AP+++ +YDQM +PKWVI+MG C+++GG + Y+ +QGVD+ IPVDV Sbjct: 65 DVLIVAGTVVNKVAPMLKLIYDQMPDPKWVIAMGGCSSAGGPFPTYATLQGVDRIIPVDV 124 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRPLSW--VVGDQGVYRANMQSERER 203 Y+PGCPP P+A + ++ LQ+ I ++ W + + + +E+ Sbjct: 125 YVPGCPPTPQALLWGILELQKKIKAKKEGKVWEEIPVREVPTASQPIPIKEK 176 >UniRef50_C6X0Z2 NADH-ubiquinone oxidoreductase chain B n=2 Tax=Flavobacteriaceae RepID=C6X0Z2_FLAB3 Length = 185 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 73/174 (41%), Positives = 108/174 (62%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV 85 +P E + F KL+ ++ RK S+WP F SCC +E + +D +RFG E Sbjct: 12 AEPPEGFEGEGFFATKLSSVIGMARKYSLWPLPFATSCCGIEFMAVLNPTYDASRFGMER 71 Query: 86 LRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGV 145 SPRQAD+++V GT K+ PV++++Y QM EP+WV+++GACA+SGG++D YSV+QG+ Sbjct: 72 NSFSPRQADMLMVCGTISKKLGPVLKQVYTQMAEPRWVVAVGACASSGGIFDTYSVLQGI 131 Query: 146 DKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQS 199 DK IPVDVY+PGCPPRPE ++ +M +Q E + Q + + S Sbjct: 132 DKIIPVDVYVPGCPPRPEQIIEGVMQVQALCEGESIRRRDMPEYQNLLASYGIS 185 >UniRef50_A9A345 NADH-quinone oxidoreductase, B subunit n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A345_NITMS Length = 174 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 71/151 (47%), Positives = 98/151 (64%), Gaps = 1/151 (0%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 ++ + L +NWGR S+WP + +CC VE + + +DV RFG S Sbjct: 19 GDILEKAIDKPLGYAINWGRIWSLWPVHIETACCSVEFGAASSPRYDVERFGIIEAFGSL 78 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFI 149 RQ DL+VV GT KMAP ++ +YDQM EPK+VI+MGACA +GG+ +D Y+V+ G+D I Sbjct: 79 RQCDLVVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGIDGVI 138 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 PVDVY+PGCPPRPE +Q +LLQE I + + Sbjct: 139 PVDVYVPGCPPRPETLIQGCILLQEKIKRMK 169 >UniRef50_A0RY66 NADH-ubiquinone oxidoreductase, subunit B n=3 Tax=Thaumarchaeota RepID=A0RY66_CENSY Length = 160 Score = 202 bits (513), Expect = 8e-51, Method: Composition-based stats. Identities = 72/156 (46%), Positives = 97/156 (62%), Gaps = 1/156 (0%) Query: 31 QEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP 90 ++ + L +NWGR S+WP + +CC VE + +DV RFG S Sbjct: 5 GDILEKAIDKPLGYAINWGRIWSLWPVHIETACCSVEFGAASGPKYDVERFGIIEAFGSL 64 Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFI 149 RQ DL+VV GT KMAP ++ +YDQM EPK+VI+MGACA +GG+ +D Y+V+ G+D + Sbjct: 65 RQCDLIVVQGTITRKMAPRLRLVYDQMPEPKYVIAMGACAITGGLYFDSYNVLPGIDGVL 124 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 PVDVY+PGCPPRPE +Q MLLQE I + R Sbjct: 125 PVDVYVPGCPPRPETLIQGCMLLQEKIKRMRARKEV 160 >UniRef50_A8M069 NADH-quinone oxidoreductase subunit B 1 n=6 Tax=Actinomycetales RepID=NUOB1_SALAI Length = 188 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 80/146 (54%), Positives = 101/146 (69%), Gaps = 1/146 (0%) Query: 35 KNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQAD 94 V + ++NWGR+ S+W +NFGL+CC +E + + + HD R G PRQAD Sbjct: 4 PAVLGEPIRFVLNWGRRYSLWVFNFGLACCAIEFIATSMSRHDFMRLGVIPFAHGPRQAD 63 Query: 95 LMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDV 153 LMVV+GT KMAP I+RLYDQM EPK+VIS GAC+N GG Y D YSV +GVD+ IPVDV Sbjct: 64 LMVVSGTVTDKMAPAIKRLYDQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQLIPVDV 123 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKE 179 Y+PGCPPRPEA + ++ LQE I E Sbjct: 124 YVPGCPPRPEALLHGILRLQEKIAAE 149 >UniRef50_A5TDF9 NADH-quinone oxidoreductase, B subunit n=2 Tax=pseudomallei group RepID=A5TDF9_BURMA Length = 293 Score = 200 bits (509), Expect = 2e-50, Method: Composition-based stats. Identities = 74/148 (50%), Positives = 100/148 (67%), Gaps = 2/148 (1%) Query: 33 VNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQ 92 + L+ + +KNS+W FGL+CC VEM+ + A +D+ RFG + RASPRQ Sbjct: 135 EKDGFIVTTLDAAMAAAQKNSLWYMTFGLACCAVEMMHAAGARYDMDRFGM-IPRASPRQ 193 Query: 93 ADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPV 151 DLM+VAGT KMAP ++R+YDQM EP++V+SMG+CAN GG Y YSVV+G D+ +PV Sbjct: 194 CDLMIVAGTLTNKMAPAMRRVYDQMAEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPV 253 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKE 179 DVY+PGCPP EA + LM LQ + + Sbjct: 254 DVYVPGCPPTAEALVYGLMQLQRKVAER 281 >UniRef50_A2BJ94 NAD(P)H-quinone oxidoreductase chain K n=10 Tax=Thermoprotei RepID=A2BJ94_HYPBU Length = 209 Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 2/192 (1%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFG 82 + + + + + + +++WG S+WP + SCC E + +D R G Sbjct: 14 GRLEEAAAKAMKWLLERKPIKSLLDWGISFSLWPVHLTTSCCGAEFAAVYDPKYDSERLG 73 Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVV 142 + PR ++++V GT KMA + +++QM PK+VI+MGACA +GG++ + Sbjct: 74 SLPFT-HPRNTNVLLVEGTLTRKMARAARLVWEQMPWPKFVIAMGACAITGGIFYNSYNI 132 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA-NMQSER 201 V++ +PVD Y+PGCPP PEA AL+ LQE + K + + + E+ Sbjct: 133 VRVNQILPVDYYVPGCPPTPEAVANALIKLQEKVRKGEWKPRDIEDKKFLEELMAPHYEK 192 Query: 202 ERKRGERIAVTN 213 R+ E +A T Sbjct: 193 ARRHLELLARTQ 204 >UniRef50_A0B811 F420H2 dehydrogenase subunit B n=6 Tax=Archaea RepID=A0B811_METTP Length = 190 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 67/178 (37%), Positives = 113/178 (63%), Gaps = 4/178 (2%) Query: 11 NGENDRYPLQKQEIVTD--PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEM 68 + E +++ + + ++ +++++ + MG + +++NWGRKNS+W + CC VEM Sbjct: 14 DEEIEKWTIWGRPVMDVWFTTTEKIHQIIQMGPIKNVLNWGRKNSLWFLMQPMGCCGVEM 73 Query: 69 VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 + +D RFG + RA+PRQAD+M+++G K P I+ L++QMLEPKW I++G Sbjct: 74 LVFGCPHYDCDRFGI-IPRATPRQADVMIISGYITRKYLPAIKNLWEQMLEPKWCIAVGE 132 Query: 129 CANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSW 185 CA SGG + D Y+++Q F P+DVY+PGCPPRPE +++ + LQE I + + + Sbjct: 133 CAISGGPFYDSYNIIQNTSDFFPIDVYVPGCPPRPEQFIKGFVELQEKIKQRKDKRGY 190 >UniRef50_D2EGC1 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGC1_9EURY Length = 172 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 66/142 (46%), Positives = 98/142 (69%), Gaps = 1/142 (0%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 +N ++NWGR NS+WP FG SCC +EM+T D R G SPRQ+DL++V+GT Sbjct: 24 INTVLNWGRSNSLWPLTFGTSCCAIEMMTFGATKVDADRLGVLFNGDSPRQSDLILVSGT 83 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 KMA + +Y+Q+ +PK+VI++GAC SGG+Y D Y+ ++G+D+ +PVD +IPGCPP Sbjct: 84 ITKKMARRLLNVYEQIPDPKYVIAVGACNVSGGLYHDSYNTIEGIDRIMPVDAFIPGCPP 143 Query: 161 RPEAYMQALMLLQESIGKERRP 182 RPE ++ A+ +LQ+ I + R Sbjct: 144 RPEEFLDAVRVLQKLIKENRSK 165 >UniRef50_B3TC56 Putative NADH ubiquinone oxidoreductase, 20 Kd subunit n=1 Tax=uncultured marine microorganism HF4000_APKG10H11 RepID=B3TC56_9ZZZZ Length = 182 Score = 199 bits (505), Expect = 6e-50, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 110/180 (61%), Gaps = 10/180 (5%) Query: 1 MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG 60 M+ ++ I P+G Q+IV D + + K + KL + WGRKNS+W + Sbjct: 1 MESSMKNILPDGTKT----IVQDIV-DGVNVAIKKVPLVKKL---ITWGRKNSLWVVHLT 52 Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP 120 CC E A +D+ RFG V+ A RQ D++++ G KMA V++R YDQM +P Sbjct: 53 TGCCSPEFAALAGAGYDMERFGPLVMAA-MRQCDILIIEGQVADKMAEVVKRTYDQMPDP 111 Query: 121 KWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 K+VI++G CA SGG Y D YS+V G+DK IPVDVY+PGCPPRPE ++ A+ L+Q + KE Sbjct: 112 KYVIAVGNCAISGGFYWDSYSMVMGIDKIIPVDVYVPGCPPRPEDWIDAIRLVQTRMDKE 171 >UniRef50_UPI0001C31273 NADH-quinone oxidoreductase, B subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31273 Length = 229 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%) Query: 2 DYTLTRIDPNGENDRYPLQKQ--------EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNS 53 L + G + + +Q+Q ++ LEQ V + V L+ + W R NS Sbjct: 5 RAKLGQPAAEGGGEEFRIQQQRARDMLRGDLTDRELEQYVEERVLTTTLDKVTAWARGNS 64 Query: 54 IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 ++P FGL+CC +EM++ A D+ RFG E RASPRQAD+++++G KMAP+++R+ Sbjct: 65 MFPATFGLACCAIEMMSLPGARLDIGRFGFEAFRASPRQADMLILSGRVSIKMAPIVRRI 124 Query: 114 YDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 YDQMLEP+W ISMGAC +S G+++ Y++V DKF+P+DV++PGCPPRPEA A++ L+ Sbjct: 125 YDQMLEPRWAISMGACCSSMGVFNNYALV-PADKFMPIDVHVPGCPPRPEALAHAILKLR 183 Query: 174 ESIGKERRPLSWVVGDQGVYRANMQSERERK 204 + P W + V + +R Sbjct: 184 SKVHGNP-PAGWRERYEAVGTEEVVGAADRP 213 >UniRef50_C7DI98 NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI98_9EURY Length = 206 Score = 191 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 5/162 (3%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 N +V W R NS+WP FGL+CC +E++ A D R G + R +PRQ D+M+VAG Sbjct: 48 NGVVKWSRSNSMWPMLFGLACCAIELMDFGAARIDAERKGYLLFRGTPRQCDVMIVAGWV 107 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPR 161 M P ++RLY+QM PK+V++ G CA +GG Y+ Y++V+G+D+ +PVDVY GCPP+ Sbjct: 108 TKSMVPRVKRLYEQMASPKYVVAYGECATAGGPWYESYNIVKGIDQVLPVDVYAIGCPPK 167 Query: 162 PEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERER 203 PE ALM LQE +G + ++ + ++E ER Sbjct: 168 PENLFAALMKLQEKVGGK----VAGSEERTIAENPRRAENER 205 >UniRef50_A7GWN3 HsdS n=9 Tax=Proteobacteria RepID=A7GWN3_CAMC5 Length = 274 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 3/161 (1%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQAD 94 N KL + N R S++ + G + C +E+ + T + D RFG +++ A+PR AD Sbjct: 14 NDLTAKLEHLKNIKRSFSVYRIDCGSCNGCEIEIFAAITPMWDPERFGFKLV-ANPRHAD 72 Query: 95 LMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDV 153 +++ +G +M + R Y+ +PK V++ GAC +SGG++ D YSV G+DK IPVDV Sbjct: 73 ILICSGPVTRQMYYPLLRAYEAAPDPKIVVAFGACGSSGGIFHDAYSVWGGIDKIIPVDV 132 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 YIPGCPP P + + L + I ++ S+ Sbjct: 133 YIPGCPPHPASVIYGLGMALGIIDQKLHKKSYEDDSTLPPP 173 >UniRef50_C7NUN9 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NUN9_HALUD Length = 183 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 15/182 (8%) Query: 42 LNDMVNWGRKNSIWPYNFGL---SCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 + +++W R S W + + C +E + + +DV RFG + + +PR AD++V Sbjct: 1 MGRIIDWARNRSPWILHMNCGSCNGCDIETLDALMPRYDVERFGIQQ-KDTPRHADVLVA 59 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPG 157 G +MAP ++R+Y+QM EPK VI+ G+CA +GG++ D Y+ +G+D IPVD+Y+PG Sbjct: 60 TGPVTKQMAPRLERIYEQMPEPKLVIAAGSCAATGGVFQDCYNCHEGIDDVIPVDMYVPG 119 Query: 158 CPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTP 217 CP PE + ++ L E G+E + + + G RI P Sbjct: 120 CPISPETLIDGIVALLEEAGQEAKAERLAAAKPEIVQG----------GTRIDEAVAADP 169 Query: 218 DE 219 ++ Sbjct: 170 EQ 171 >UniRef50_Q26783 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial n=7 Tax=Trypanosomatidae RepID=NDUS7_TRYBB Length = 202 Score = 187 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 66/138 (47%), Positives = 96/138 (69%), Gaps = 2/138 (1%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 L+D+ W S WP FGL+CC VEM+ ++ + +D+ RFG V R +PRQA++++V+G Sbjct: 55 TLHDLTEWCLAYSPWPLTFGLACCAVEMMHAYASRYDLDRFGI-VPRPTPRQAEIIIVSG 113 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCP 159 T KMAP+++ +Y QM+ PKWVISMG+CAN GG Y Y+V++G ++ IPVD +IPGCP Sbjct: 114 TVTNKMAPILRNIYVQMVNPKWVISMGSCANGGGYYHFSYAVLRGCERAIPVDFWIPGCP 173 Query: 160 PRPEAYMQALMLLQESIG 177 P E+ + L LQ+ I Sbjct: 174 PSAESLVFCLHTLQKKIR 191 >UniRef50_A1RZ48 NADH-quinone oxidoreductase, B subunit n=3 Tax=Thermoprotei RepID=A1RZ48_THEPD Length = 171 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 58/158 (36%), Positives = 83/158 (52%), Gaps = 1/158 (0%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFG 82 + + + V + + +W S+WP +F SCC E + D RFG Sbjct: 11 GRLEESARKAAQWLVEKTPIRSLRDWAITFSLWPVHFTTSCCGAEFAATSAPRFDAERFG 70 Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVV 142 SPRQ +LMV+ GT KM + +YDQM PK+VI+MGACA GG++ + Sbjct: 71 FLPF-NSPRQTNLMVIEGTLTKKMGEAAKIVYDQMPWPKFVIAMGACAIDGGLFYNSYNI 129 Query: 143 QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +PV+ +IPGCPPRPEA QA+++LQE + K Sbjct: 130 VRPKDILPVEYFIPGCPPRPEAVAQAIIMLQEKVRKGE 167 >UniRef50_C7MLM8 Ni,Fe-hydrogenase III small subunit n=20 Tax=Bacteria RepID=C7MLM8_CRYCD Length = 283 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 5/212 (2%) Query: 4 TLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LS 62 + G R Q++ + +++ + K + + R I+ + G + Sbjct: 11 STQSSIMQGYETRSTATAQKLQYQLEPKVLDQKIAEAKAALLNDIKRSVYIYRVDCGGCN 70 Query: 63 CCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKW 122 C +E+ + T V D RFG + + ASPR AD++V G M R Y+ +PK Sbjct: 71 GCEIEIFGTLTPVFDAERFGIKNM-ASPRHADILVYTGAVTRAMRLPALRAYEAAPDPKL 129 Query: 123 VISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE-- 179 ++S GAC +GG++ D Y V G DK PVDVYIPGCPP P + + +G++ Sbjct: 130 IVSYGACGCTGGIFHDNYCVWGGTDKLFPVDVYIPGCPPSPAQTIYGFAMALGLLGQKLH 189 Query: 180 RRPLSWVVGDQGVYRANMQSERERKRGERIAV 211 + L G+Q + R ER A Sbjct: 190 EKHLVEGEGEQAPIMFADIPYKLRCELEREAR 221 >UniRef50_A8MBS9 NADH-quinone oxidoreductase, B subunit n=5 Tax=Thermoproteaceae RepID=A8MBS9_CALMQ Length = 374 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 3/176 (1%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 + + +WG K SIWP + +CC VE + +D R+G + PRQ + +V+ GT Sbjct: 25 DSLASWGTKFSIWPAHLVTACCGVEFAHASAPGYDAERWGF-LPIFGPRQTNSIVIEGTV 83 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRP 162 KMA +++ Y+QM PK+VI+MG+CA GG++ V V++ +PVD ++ GCPP P Sbjct: 84 TRKMARIVKTAYEQMPYPKFVIAMGSCAMEGGVFWNSYHVVRVNEIVPVDAWVMGCPPTP 143 Query: 163 EAYMQALMLLQESIGKERRPLSWVVGDQGVYR--ANMQSERERKRGERIAVTNLRT 216 EA ++A+ ++Q I + + + + + +R RI ++ Sbjct: 144 EAVIRAIRMVQSKIEGKEVKPNIRPNPVDLSKVLKPDKPQRPPNPPHRIEFELIKD 199 >UniRef50_A0L9R6 Membrane bound protein complex subunit mbxJ n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9R6_MAGSM Length = 213 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 4/174 (2%) Query: 8 IDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVE 67 P+G+ ++ + V ++ + D+ NW R NSIW FG C +E Sbjct: 11 TGPDGQVFEVD-PLKDYFCEATPT-VQTGEYLQIVEDLFNWARSNSIWVLGFGTGCGAIE 68 Query: 68 MVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMG 127 M T D R+G + RA+PRQ++L +V+G K + R Y+QM PK+V+ +G Sbjct: 69 MRPLMTPRFDAYRYGVQ-WRATPRQSNLFIVSGYLSVKTLKRVVRAYEQMQSPKYVMGLG 127 Query: 128 ACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +C +GGMY D Y+ ++ +D ++PVD+Y+ GC PRPEA + + L++ I + R Sbjct: 128 SCTINGGMYWDSYNTIKQLDDYLPVDLYVTGCMPRPEALLSGIEALKKIIREGR 181 >UniRef50_A3DKH2 NADH-quinone oxidoreductase, B subunit n=5 Tax=cellular organisms RepID=A3DKH2_STAMF Length = 165 Score = 182 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 5/138 (3%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 + + W +F + C +E++ + T ++D RFG + L S R AD++VV G K A Sbjct: 28 RYTPWLIHFNTGACNGCDIEVLAAITPLYDPERFGIK-LAPSIRHADILVVTGAVTKKAA 86 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 ++RLY+QM +PK+V+++GACA SGG++ YSV+ G DK IPVD+Y+PGCPPRPEA + Sbjct: 87 ERLKRLYEQMPDPKFVVAVGACAISGGVFHNSYSVLAGTDKVIPVDIYVPGCPPRPEAIL 146 Query: 167 QALMLLQESIGKERRPLS 184 ++ L + + Sbjct: 147 DGIVKLLKRLESGETKAE 164 >UniRef50_B9L626 NADH-ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Epsilonproteobacteria RepID=B9L626_NAUPA Length = 157 Score = 182 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 86/141 (60%), Gaps = 2/141 (1%) Query: 41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 K+ D N+ R S W +F CC +EM+ + +D R+G ++ +PRQAD+M + G Sbjct: 3 KVLDFFNYARSKSPWIVHFCSGCCSLEMLAAMGPRYDWERYGY-IMTPTPRQADIMFITG 61 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCP 159 K+ P + R Y+QM EP++V+++GACA GG Y D SV++ + + +P DV++ GCP Sbjct: 62 LVSKKILPALLRTYEQMPEPRYVVAIGACAYDGGPYNDSVSVIKNMTEILPADVFVAGCP 121 Query: 160 PRPEAYMQALMLLQESIGKER 180 PRPEA + L L+E I + Sbjct: 122 PRPEAIIAGLEELKEKIKRGE 142 >UniRef50_B1L7S0 F420H2 dehydrogenase subunit n=3 Tax=Archaea RepID=B1L7S0_KORCO Length = 174 Score = 181 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 1/156 (0%) Query: 25 VTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAE 84 + + V + D+ +WG S+WP +F +CC E S +D R G Sbjct: 14 LERSARKAAAWLVNKRPIRDIRDWGIAFSLWPVHFTTACCGAEFAASAAPKYDAERLGFL 73 Query: 85 VLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQG 144 RQ +++ + GT KMA +Y+QM EPK+VI MGACA GG++ + Sbjct: 74 PFIGI-RQCNVLFIEGTLSKKMAEAAIWVYEQMPEPKFVIGMGACAIDGGIFWNSYNIVR 132 Query: 145 VDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 +PV+V+IPGCPPRPEA QA+++LQ I K Sbjct: 133 PMDILPVNVFIPGCPPRPEAVAQAIIMLQRKIRKGE 168 >UniRef50_B8J1E3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J1E3_DESDA Length = 185 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 103/185 (55%), Gaps = 10/185 (5%) Query: 39 MGKLNDMVNWGRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL 95 MG ++ M+ R S W +F + C +E++ T ++DV RFG V +P+ AD+ Sbjct: 1 MGFVDKMIKRSRLKSPWIVHFDCGSCNGCDIEVLACLTPMYDVERFGV-VNAGNPKHADV 59 Query: 96 MVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVY 154 ++V GT + V++++Y+QM PK VIS+GAC SGG++ D Y+V+ G IPVDV+ Sbjct: 60 LLVTGTVNHRNRHVLKQIYEQMPSPKAVISLGACNLSGGVFKDTYNVLNGAHNVIPVDVF 119 Query: 155 IPGCPPRPEAYMQALML----LQESIGKERRPL-SWVVGDQGVYRANMQSERERKRGERI 209 +PGCPP+PEA + ++ L+ +G P +++ GD+ A + E Sbjct: 120 VPGCPPKPEAIIDGVVEALGVLKAKMGMGPVPQATFMPGDEDGTPAGARDEEAPASEGDK 179 Query: 210 AVTNL 214 ++ N Sbjct: 180 SLQNA 184 >UniRef50_B1ZSE5 NADH ubiquinone oxidoreductase 20 kDa subunit n=14 Tax=Bacteria RepID=B1ZSE5_OPITP Length = 279 Score = 180 bits (456), Expect = 3e-44, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 6/172 (3%) Query: 10 PNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEM 68 P+G R ++ +I + E +++ ++ GR I + G + C VE+ Sbjct: 112 PDGTQARM-IEAPQISETGEKTEALGRELQNRIHSLL--GRSLHIREVDAGSCNGCEVEI 168 Query: 69 VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 ++D+ RFG ++ ASPR AD+++V G M +++ YD EP+ V+++GA Sbjct: 169 NALSGPIYDLERFGIHLV-ASPRHADMLLVTGPVTRNMELALRKTYDATPEPRLVVAVGA 227 Query: 129 CANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 C SGGM+ Y+ VD +PVDVYIPGCPP P A + ++L + K Sbjct: 228 CGCSGGMFGRNYATCGSVDSVLPVDVYIPGCPPNPFALLHGILLAVGRLEKR 279 >UniRef50_C7IG01 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IG01_9CLOT Length = 266 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 84/152 (55%), Gaps = 6/152 (3%) Query: 24 IVTDPLEQEVNKNVFMGKLNDMV--NWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVAR 80 ++ + + + + KLN+ V +GR +I + G + C E+ +D+ R Sbjct: 112 VIDEEINGT-DYELIGKKLNEKVAKKFGRSLNIREVDAGSCNGCDYEIQALNGPYNDIER 170 Query: 81 FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIY 139 FG + ASPR AD+++V G M + + Y+ PK V++ GACA SGG++ D Y Sbjct: 171 FGIHFV-ASPRHADMLLVTGCVSRNMEEALVKTYNATPSPKLVVAAGACACSGGLFKDSY 229 Query: 140 SVVQGVDKFIPVDVYIPGCPPRPEAYMQALML 171 + G+D +PVDVYIPGCPPRP+A + ++ Sbjct: 230 AGRNGIDTILPVDVYIPGCPPRPQALIYGILK 261 >UniRef50_Q0W2C0 Hydrogenase, small subunit-like protein (HycG-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2C0_UNCMA Length = 247 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 5/154 (3%) Query: 30 EQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRA 88 + E + K+ +GR +I + G + C VE+ + A++D+ RFG ++ A Sbjct: 97 DVESSGRELEKKIKKA--FGRSLAIREVDAGSCNGCEVEVNSLSNAIYDIERFGLHIV-A 153 Query: 89 SPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDK 147 SPR AD ++V G M + + Y+ +PK VI+MGACA +GG++ D Y+V GVD Sbjct: 154 SPRHADALLVTGPVTRNMERGLMQSYNATPDPKMVIAMGACAITGGIFRDSYAVYNGVDA 213 Query: 148 FIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 +PVDVYIPGCPPRP+A +Q +ML + ++R+ Sbjct: 214 LVPVDVYIPGCPPRPQAIIQGIMLAIDRWEEKRK 247 >UniRef50_B2IID4 NADH ubiquinone oxidoreductase 20 kDa subunit n=9 Tax=Bacteria RepID=B2IID4_BEII9 Length = 177 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 6/165 (3%) Query: 17 YPLQKQEIVTDPLEQEVNKNVFMGKLNDMVN--WGRKNSIWPYNFG-LSCCYVEMVTSFT 73 + + +T+ + +L+ + GR +I + G + C +E+ Sbjct: 6 FQGLAKPPLTEAGPTDGEIAALAAELDHLARSRLGRSLAIREVDAGSCNGCELEINALGN 65 Query: 74 AVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSG 133 A +D+ RFG + ASPR AD+++V G M + R YD PKWV++ G CA Sbjct: 66 AFYDLERFGLRFV-ASPRHADVLLVTGPVTHNMREALLRTYDATPNPKWVVAAGTCALGE 124 Query: 134 GMYDIYSVV--QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 G++ GV I VD+YIPGCPP P ++ L+ L Sbjct: 125 GVFAESYACQKGGVSAVIAVDLYIPGCPPTPTDLLKGLLALITKN 169 >UniRef50_P16433 Formate hydrogenlyase subunit 7 n=169 Tax=Bacteria RepID=HYCG_ECOLI Length = 255 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 20/212 (9%) Query: 22 QEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVAR 80 ++ P+ V++++ K + + R ++ + G + C +E+ + + + D R Sbjct: 8 RDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAER 67 Query: 81 FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIY 139 FG +V+ SPR AD+++ G M R + +PK IS GAC NSGG++ D+Y Sbjct: 68 FGIKVV-PSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLY 126 Query: 140 SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE----------RRPLSWVVGD 189 V G DK +PVDVYIPGCPP P A + + + ++ +P + GD Sbjct: 127 CVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGD 186 Query: 190 QGVYRANMQSERERKR------GERIAVTNLR 215 V ++ +RE +R G +IA L Sbjct: 187 M-VQPLRVKVDREARRLAGYRYGRQIADDYLT 217 >UniRef50_A4WJL4 NADH-quinone oxidoreductase, B subunit n=6 Tax=Thermoproteaceae RepID=A4WJL4_PYRAR Length = 196 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 1/145 (0%) Query: 40 GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 KL + NWG + S+WP + SCC VE+ + D R+G + RQ+++++V Sbjct: 20 AKLEKIFNWGVRWSLWPVHLVTSCCGVEVAHTSGPGFDAERWGVLPFH-TMRQSNVILVE 78 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCP 159 GT KMA V++ +Y+QM EPK+V++MGACA GG++ V VD +PVDVYI GCP Sbjct: 79 GTITRKMAKVLKMVYEQMPEPKFVLAMGACAVRGGLFWNSYHVVQVDTVVPVDVYIAGCP 138 Query: 160 PRPEAYMQALMLLQESIGKERRPLS 184 P PEA ++A ++L I + P Sbjct: 139 PTPEAVVRAFIMLHNKIKGKPGPFI 163 >UniRef50_B9L8U0 Hydrogenase-4 component I n=2 Tax=Epsilonproteobacteria RepID=B9L8U0_NAUPA Length = 164 Score = 177 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 53/162 (32%), Positives = 95/162 (58%), Gaps = 7/162 (4%) Query: 45 MVNWGRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + RK S W ++ G + C +E++ + +D+ RFG + R +P+Q+D+++V G Sbjct: 3 IFTKFRKKSPWILHYNTGGCNGCDIEILAALAPKYDIERFGM-LNRGNPKQSDILLVTGP 61 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 + V++RLY +M EPK V++MGACA+ GG++ D Y V GVD IPVDV+IPGC P Sbjct: 62 VTKRCRDVLRRLYLEMPEPKVVVAMGACAHGGGIFRDFYHVENGVDNIIPVDVWIPGCAP 121 Query: 161 RPEAYMQALMLLQESIGKERRPLSWV--VGDQGVYRANMQSE 200 R EA + ++ + K+ + ++ ++ + + +++ Sbjct: 122 RVEAVIDGMVEAVKIWEKKTKEKEFMRNHSNELLEKLGARND 163 >UniRef50_B6IT61 Hydrogenase-4 component I n=4 Tax=Bacteria RepID=B6IT61_RHOCS Length = 196 Score = 177 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 9/195 (4%) Query: 12 GENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDM--VNWGRKNSIWPYNFG-LSCCYVEM 68 G R L+ + P + +L+ GR +I + G + C +E+ Sbjct: 3 GVIARILLKGPRTIAGPAPADATVEALARRLDTASRRRLGRSLAIRQVDAGSCNACEMEI 62 Query: 69 VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 V+D+ RFG + ASPR AD+++V G T M + + ++ +PKWV+++G Sbjct: 63 HALNNPVYDLERFGFSFV-ASPRHADVLLVTGPVTTNMREALLKTWEATPDPKWVVALGQ 121 Query: 129 CANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVV 187 CA GG + D Y+VV GV+K +PVD+ IPGCPPRP + AL+ L I E RP S Sbjct: 122 CAIDGGPFADSYAVVGGVEKVVPVDLMIPGCPPRPVDILAALVAL---IEAEARPPS-RP 177 Query: 188 GDQGVYRANMQSERE 202 G + RE Sbjct: 178 AASGTPAGAPRERRE 192 >UniRef50_C5A4Q2 Membrane bound oxidoreductase, MbxJ subunit (MbxJ) n=11 Tax=cellular organisms RepID=C5A4Q2_THEGJ Length = 194 Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats. Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 10/173 (5%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + W RK S+W F C +EM TA +D RFG + +PR ADL ++ G Sbjct: 18 FEPLFRWARKKSLWIVAFCTGCGGIEMPPLATARYDFERFGI-MPNPAPRMADLFLITGY 76 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 K I Y+ M +PK+V++ G+C +GG+Y D Y+VV+ +DK+IP+DV I GC P Sbjct: 77 VTPKTLKRIIITYEMMQDPKYVLAHGSCPINGGVYWDSYNVVKQLDKYIPIDVAIAGCMP 136 Query: 161 RPEAYMQALMLLQESI--------GKERRPLSWVVGDQGVYRANMQSERERKR 205 RPEA M +M + I + R W +Q E++ KR Sbjct: 137 RPEAVMDGIMEIMRKIENGEADGWKRYRENYEWYRKNQDELFGEGWREKDAKR 189 >UniRef50_Q6C2Q1 YALI0F06050p n=1 Tax=Yarrowia lipolytica RepID=Q6C2Q1_YARLI Length = 216 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 8/148 (5%) Query: 5 LTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCC 64 R+ + +PL Q+ ++ + L+ + NW R+ S WP FGL+CC Sbjct: 33 TPRVSSSSMPTDFPLPSQQKPNSAVD------YTLTTLDAVANWARQGSFWPVTFGLACC 86 Query: 65 YVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVI 124 VEM+ +D R G + RASPRQ+D+M+VAGT KMAPV++++YDQM EP+WVI Sbjct: 87 AVEMMHVSAPRYDQDRLGI-IFRASPRQSDIMIVAGTLTNKMAPVLRQVYDQMPEPRWVI 145 Query: 125 SMGACANSGGMYD-IYSVVQGVDKFIPV 151 SMG+CAN GG Y YSVV+G D+ +PV Sbjct: 146 SMGSCANGGGYYHFSYSVVRGCDRIVPV 173 >UniRef50_A3DM92 NADH-quinone oxidoreductase, B subunit n=1 Tax=Staphylothermus marinus F1 RepID=A3DM92_STAMF Length = 179 Score = 174 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 3/170 (1%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 W R SIW ++ +C +E+ + A D R+G + SPRQAD++V+ G Sbjct: 11 FAEWVRSRSIWMIHYCSACGAIELPPNMMAPLDAERWGI-MPAPSPRQADVLVIMGYVTK 69 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 K V+ RLY QM EP++V+ C +GG+Y D YS V+ VD+F+PVDV++PGC PR E Sbjct: 70 KTLKVLMRLYHQMPEPRYVMVGCNCPATGGLYWDSYSTVKAVDEFLPVDVWVPGCMPRAE 129 Query: 164 AYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTN 213 ++Q + L++ I + R ++ ++ + R + +A Sbjct: 130 DWLQGFLKLRKKISEG-RIVNPRPVEEPGELEELIYREIEMREKMMAKVR 178 >UniRef50_Q64DY8 F420H2-quinone oxidoreductase 45 kD subunit n=8 Tax=Archaea RepID=Q64DY8_9ARCH Length = 788 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 4/174 (2%) Query: 30 EQEVNKNVFM---GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL 86 E E ++N+ + G + W K S+WP +F SCC VE+ + +D+ R G + Sbjct: 3 ETEKDRNIRILHSGVFTPLRRWATKWSLWPCHFLTSCCGVELAHTGACGYDMERLGTLNM 62 Query: 87 RASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVD 146 S RQA+ ++V GT KMA ++ +++QM +PK+V +G C GG++ + Sbjct: 63 GIS-RQANFIMVEGTITRKMARALRIVWEQMPDPKFVNVIGTCGQRGGIFWNSYNITRPS 121 Query: 147 KFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 +PVD +IPGCP PE+ ++ + +QE I + ++ Sbjct: 122 DIVPVDFFIPGCPITPESLLRGVRAVQEKIEGRDNTTIRFKHVELPSGDGEENR 175 >UniRef50_A9BJL8 NADH ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=cellular organisms RepID=A9BJL8_PETMO Length = 195 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 2/150 (1%) Query: 32 EVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 E + N + + N R S+W ++ C VE+ + TA D+ R G + A+PR Sbjct: 14 EEDLNDTITFWEKIKNIFRGKSLWMLHYCTGCGAVELPPTMTARFDMERLGMGPM-ATPR 72 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIP 150 QAD++++ G K + Y+QM+ PK+++ G+C +GG+ YD Y+V+ +D ++P Sbjct: 73 QADVLLITGYLSVKTLRRVIYTYEQMMTPKYLVGFGSCTINGGIYYDSYAVINRLDYYLP 132 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKER 180 VD+Y+ GC PRPEA M L+ I K Sbjct: 133 VDLYVAGCMPRPEAIMNTFKTLENMITKGE 162 >UniRef50_A9KS72 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=cellular organisms RepID=A9KS72_CLOPH Length = 144 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 88/135 (65%), Gaps = 5/135 (3%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S W ++ + C +E++ T ++DV RFG + +P+ AD++++ G+ + Sbjct: 5 KKSPWIIHYDGSSCNGCDIEVLACLTPLYDVERFGI-INTGNPKHADILLITGSVNEQNI 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 PV++++Y+QM EPK V+++G CANSGG++ + Y+V GVDK +PVDVY+PGC RPEA + Sbjct: 64 PVVKQIYEQMAEPKIVVAVGICANSGGIFAECYNVSGGVDKVLPVDVYVPGCAARPEAII 123 Query: 167 QALMLLQESIGKERR 181 ++ + ++++ Sbjct: 124 DGVVKGLAILEEKQK 138 >UniRef50_B2A054 NADH ubiquinone oxidoreductase 20 kDa subunit n=54 Tax=cellular organisms RepID=B2A054_OPITP Length = 338 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 48/144 (33%), Positives = 84/144 (58%), Gaps = 5/144 (3%) Query: 49 GRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTK 105 G + S W ++ + C +E + T ++DV R G + +P+ AD+ +V G + Sbjct: 3 GLRKSPWIIHYDASSCNGCDIETLACLTPLYDVERLGV-INTGNPKHADIFLVTGAVNEQ 61 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 VI+ +Y Q+ EPK V+++G CA+SGG++ D Y++ GVD+ IPVDVY+PGC RPEA Sbjct: 62 SKEVIRNIYHQLPEPKVVVAIGVCASSGGIFRDCYNIAGGVDRVIPVDVYVPGCAARPEA 121 Query: 165 YMQALMLLQESIGKERRPLSWVVG 188 + ++ + +++ +S + Sbjct: 122 IIDGVVQALGVLERKQSEMSALAN 145 >UniRef50_A1ASR2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=cellular organisms RepID=A1ASR2_PELPD Length = 179 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 5/157 (3%) Query: 42 LNDMVNWGRKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVV 98 L ++ S+W Y+ G + C +E++ T +DV RFG +++ SPR AD+M+ Sbjct: 2 LKNLCQKVFGRSLWVYHANSGGCNGCDIEVLNVLTPYYDVERFGIKLV-GSPRHADVMLC 60 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPG 157 G +QR Y M PK V ++G+CA GG+ +D Y+V V+K IPV+ Y+PG Sbjct: 61 QGPAMRSTGKALQRAYAAMPGPKLVFAIGSCACGGGIWHDSYAVHGPVEKLIPVNYYVPG 120 Query: 158 CPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 CPPRPEA + + + + K+ P+ + Sbjct: 121 CPPRPEAIIWGVAVAAGLVDKKTAPVEFKQVSDFPMP 157 >UniRef50_B6YU96 Membrane bound hydrogenase, NiFe-hydrogenase small subunit n=13 Tax=cellular organisms RepID=B6YU96_THEON Length = 175 Score = 167 bits (424), Expect = 2e-40, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 83/148 (56%), Gaps = 4/148 (2%) Query: 34 NKNVFMGKLNDMVNW-GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPR 91 + + ++ + + GR ++ N G + C +E++ + T +D RFG +++ SPR Sbjct: 18 EREMLEKRIAQLCRFIGRSPWVFHVNSGSCNGCDIEIIAALTPRYDAERFGVKLV-GSPR 76 Query: 92 QADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIP 150 AD+++V G + ++ +Y+Q +PK VI++G+C G ++ + + IP Sbjct: 77 HADVLLVTGPVTDQSLERVKLVYEQTPDPKIVIAVGSCPTGGSVFYESPFTNAPLSNIIP 136 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGK 178 VDVY+PGCPPRPEA + ++L E + K Sbjct: 137 VDVYVPGCPPRPEAILYGVVLALEKLAK 164 >UniRef50_A6UVJ5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=A6UVJ5_META3 Length = 246 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 3/129 (2%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +G+ + G + C ++ T V+D++RFG + + ASPR AD +V+ G M Sbjct: 119 FGKSVYLREVCAGGCNACDADINVLNTPVYDLSRFGIKFV-ASPRHADGLVITGPVTKNM 177 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 + + YD PK+VI++G CA SGG++ + VV GVDK +PVD+YIPGCPP P Sbjct: 178 ELALMKTYDATPSPKFVIAVGTCAISGGIFRENEEVVGGVDKILPVDLYIPGCPPHPFTN 237 Query: 166 MQALMLLQE 174 + A + + Sbjct: 238 LYAFVKFFK 246 >UniRef50_B6GAA3 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAA3_9ACTN Length = 228 Score = 166 bits (420), Expect = 5e-40, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 88/156 (56%), Gaps = 5/156 (3%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 S W ++ + C +E++ S ++D+ RFG + +P+ AD+ +V G+ + Sbjct: 5 SKSPWLIHYDGSSCNGCDIEVLDSMMPLYDIERFGI-INTGNPKHADIFLVTGSVNAQNI 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 V++ +YDQMLEPK V++ G CA +GG++ D Y+V+ GVDK IPVDVY PGC RPE + Sbjct: 64 EVVRHIYDQMLEPKVVVACGICACTGGVFRDCYNVIGGVDKAIPVDVYAPGCAVRPETII 123 Query: 167 QALMLLQESIGKERRPLSWVVGDQGVYRANMQSERE 202 A++ E + ++ + ++ R + + Sbjct: 124 DAVLKAVEILDEKAKLMAAGKDPATAPRKGLLPRKG 159 >UniRef50_C8W241 Hydrogenase, small subunit-like protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W241_DESAS Length = 236 Score = 165 bits (418), Expect = 9e-40, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 5/156 (3%) Query: 23 EIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARF 81 ++T P E K+ + + R I + G + C E+ + V+D+ ++ Sbjct: 84 PVLTAPASAEDLGRALREKIKKICH--RSLHIRYVDAGACNGCDFEINSMTNPVYDIQQY 141 Query: 82 GAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYS 140 G + + ASPR AD+++V G + + + Y+ P V+++GACA GG++ + Y+ Sbjct: 142 GVDFV-ASPRHADMLLVTGVVTRNLEIALHKTYEACPRPALVVAVGACACGGGVFKEAYA 200 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 GVDKF+PVDVY+PGCPP P ++ ++ + Sbjct: 201 SGGGVDKFLPVDVYVPGCPPTPAQIIKGILTAIGRL 236 >UniRef50_C6PUG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PUG1_9CLOT Length = 242 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 3/135 (2%) Query: 47 NWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTK 105 + R + + G + C +E+ + +D++R+G + ASPR AD +VV G Sbjct: 109 KFKRSLVLRSVDTGSCNGCMMEVSNTQNTYYDLSRYGIK-FAASPRHADGIVVTGPVTLN 167 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 M + + YD + +PK VI++G+CA SGG++ D YSV + +++ + V++ IPGCPP P+A Sbjct: 168 MKEALIKTYDAISDPKIVIAVGSCAYSGGIFKDGYSVCEDLNEILKVNLVIPGCPPSPQA 227 Query: 165 YMQALMLLQESIGKE 179 + ++ + + +E Sbjct: 228 ILYGMLKIINKLDEE 242 >UniRef50_Q9H3K5 My017 protein n=3 Tax=Eukaryota RepID=Q9H3K5_HUMAN Length = 214 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 7/182 (3%) Query: 11 NGENDRYPLQKQEIVTDPLEQEVNKN----VFMGKLNDMVNWGRKNSIWPYNFGLSCCYV 66 P Q + + + KL+D+VNW R++S+WP FGL+CC V Sbjct: 32 QSVATDGPSSTQPALPKARAVAPKPSSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAV 91 Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 EM+ +D+ RFG V RASPRQ+D+M+VAGT KMAP +++ + + + Sbjct: 92 EMMHMAAPRYDMDRFGV-VFRASPRQSDVMIVAGTLTNKMAPALRKSPPRPDAGAALRGL 150 Query: 127 -GACANSGGMYDIYSVVQ-GVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLS 184 G G + ++ + G+ P P EA + ++ LQ I +ERR Sbjct: 151 HGELRQRGRLLPLFLLGGEGLRPHRARGHLHPRLPTTAEALLYGILQLQRKIKRERRLQI 210 Query: 185 WV 186 W Sbjct: 211 WY 212 >UniRef50_Q39SF9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39SF9_GEOMG Length = 244 Score = 162 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 3/133 (2%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 +GR + G + C + T D+ RFG + + ASPR AD + V G M Sbjct: 113 FGRSLKFREVSAGGCNACEADTNVLSTIGWDLGRFGIQFV-ASPRHADGLWVTGPVTEHM 171 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAY 165 A + Y+ + +PK V++ GACA +GG Y D V GVD +PVD+YIPGCPP P Sbjct: 172 AKALLTTYEAIPDPKIVVACGACAINGGPYIDTPQVCNGVDSIVPVDLYIPGCPPHPATI 231 Query: 166 MQALMLLQESIGK 178 + L+ + I Sbjct: 232 LDGLLRILNKIKG 244 >UniRef50_A5FW47 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW47_ACICJ Length = 264 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 2/135 (1%) Query: 48 WGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 + R + + G + C E+ +++ R G SPR ADL++V G M Sbjct: 124 FRRSLHVRHVDAGSCNGCESELQALNNPFYNLHRLGI-FFTPSPRFADLLLVTGPVTRAM 182 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 ++R ++ M P+WV++ G CA SGG+ + G+++ +PVD+Y+PGCPP P A + Sbjct: 183 LEPLRRTWEAMPAPRWVMASGTCAVSGGIAPGGPCLSGLEEALPVDLYLPGCPPNPAAII 242 Query: 167 QALMLLQESIGKERR 181 +AL++ + R Sbjct: 243 EALLMFLGRRAQRVR 257 >UniRef50_UPI0000EC9F96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 20 kDa subunit) (Complex I-20kD) (CI-20kD) (PSST subunit). n=1 Tax=Gallus gallus RepID=UPI0000EC9F96 Length = 176 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 4/154 (2%) Query: 35 KNVFMGKLNDMVNWGRKNS-IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQA 93 + KL+D++NW R+ + W F C M H+ + FG L A + Sbjct: 23 GEYIVTKLDDLINWARRRACFWTECF--HCVASNMGYLLWKSHERSSFGLIQLTAHMPMS 80 Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVD 152 + A ++P + E + +CAN GG Y YSVV+G D+ +PVD Sbjct: 81 TACLPARPHENHLSPHLTSAAGLGPELCFTNIFCSCANGGGYYHYSYSVVRGCDRIVPVD 140 Query: 153 VYIPGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 +Y+PGCPP EA + ++ LQ+ I +ER+ W Sbjct: 141 IYVPGCPPTAEALLYGILQLQKKIKRERKLQIWY 174 >UniRef50_Q57936 Uncharacterized protein MJ0516 n=21 Tax=Euryarchaeota RepID=Y516_METJA Length = 148 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 49/140 (35%), Positives = 81/140 (57%), Gaps = 6/140 (4%) Query: 50 RKNSIWPY---NFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 RK SI G + C +E+V +D+ ++G + +PR+AD+++V G + Sbjct: 7 RKRSIHVCVVNTGGCNGCDIEIVACLAPRYDIEQYGI-YVHNNPREADVLLVTGPVTLQW 65 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 A ++ +Y++ EPK V+++GACA SGG++ VV GVDK IPVD IPGCPPRP + Sbjct: 66 AERLKEIYEKTPEPKIVVAVGACALSGGIFKEGHVVGGVDKVIPVDAKIPGCPPRPSEII 125 Query: 167 QALMLLQES--IGKERRPLS 184 + ++ + +E+R + Sbjct: 126 ETILKVAPKAIAMREKRLKN 145 >UniRef50_A7I7C9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=cellular organisms RepID=A7I7C9_METB6 Length = 172 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 10/170 (5%) Query: 12 GENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGL-SCCYVEMVT 70 G+ PL ++ + + +E+ + + +GR +I + G + +E+ Sbjct: 10 GKKVTGPLPVRDEELERIGREIRREIN-------ARFGRSLAIRELDAGSDNAAEIEINN 62 Query: 71 SFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACA 130 A +DV RFG + ASPR AD+++V G MA Q+ YD M PK+V+++G A Sbjct: 63 LSNAYYDVERFGISFV-ASPRHADVLLVTGAITCNMAIAAQKTYDAMPSPKFVVAVGDDA 121 Query: 131 NSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 GG+Y Y+V+ G D PVD+ IPG PP P + L+ L S GK Sbjct: 122 CDGGIYKGTYAVLGGADAIFPVDLKIPGNPPAPIQILTGLLALMRSAGKR 171 >UniRef50_C6ANV6 Hydrogenase-4 component I n=6 Tax=Gammaproteobacteria RepID=C6ANV6_AGGAN Length = 258 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%) Query: 13 ENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTS 71 N + P+ I T +++N+ K + N R ++ + G + C +E+ ++ Sbjct: 1 MNTQIPMPVNGISTPF---SIDENIAKMKQALLKNIQRSAYVYRVDCGGCNGCEIEIFST 57 Query: 72 FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN 131 T V D RFG +V+ ASPR AD+++ G+ M R Y +PK I+ GAC Sbjct: 58 ITPVFDAERFGIKVV-ASPRHADILLFTGSVTRAMRTPAMRAYQAAPDPKICIAYGACGC 116 Query: 132 SGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALML----LQESIGKERRPLSWV 186 GG++ D+Y V G D+ +PVDVYIPGCPP P A + + L + + ++ Sbjct: 117 GGGIFHDLYCVWGGSDQIVPVDVYIPGCPPTPAATIYGFAMALGLLDQKLKGKQEKADPN 176 Query: 187 VGDQGVYRANMQS-----ERERKR 205 + + ERE +R Sbjct: 177 AEAKLRFPTIPLDLRISLEREARR 200 >UniRef50_B2V8R1 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Aquificales RepID=B2V8R1_SULSY Length = 173 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 85/165 (51%), Gaps = 6/165 (3%) Query: 21 KQEIVTDPLEQEVNKNVFMGK-LNDMVN--WGRKNSIWPYNFG-LSCCYVEMVTSFTAVH 76 K+ I + ++ +GK L + ++ + +I + G + C E+ + Sbjct: 10 KEGIKAEEIKIRDENVEILGKQLKEKIDKYFQGSFAIREVDSGSCNACEYEISALSNPYY 69 Query: 77 DVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY 136 D+ RFG + + ASP+ AD +++ G M + + Y+ + PK++I++G CA GG + Sbjct: 70 DIERFGVKFV-ASPKHADAIMITGCLTRNMYEAVMKAYENVPNPKFIIAVGDCALDGGTF 128 Query: 137 -DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 Y+V+ G+ +P+D++I GCPP P + L++L ++R Sbjct: 129 KGSYAVMDGIKDKLPIDIWIKGCPPEPIDIISGLLILLNKKFEDR 173 >UniRef50_B8D5A0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5A0_DESK1 Length = 337 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 11/183 (6%) Query: 42 LNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 L + W S+W ++ +C VE A D R+G + SPRQ+DL + G Sbjct: 2 LERIARWAYARSLWMIHYCSACGAVEFPPLVMAPLDWERYGY-MPTPSPRQSDLYIGMGY 60 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPP 160 K ++ +Y QM EPK V++ C ++GG Y D Y+ + +D FI V+ ++PGC P Sbjct: 61 LTKKTVKLVLNMYRQMPEPKLVLAGCNCTSTGGPYWDSYATYKRLDDFIEVEGWVPGCMP 120 Query: 161 RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERER-------KRGERIAVTN 213 P+ Y+ + +++ + +RPL+ V SE E + E+I + Sbjct: 121 MPDDYLSMIEYVRKDL--GKRPLNAYVSKIKPDAFKKISEWEELEKQWRKEYEEKIKEDS 178 Query: 214 LRT 216 + Sbjct: 179 SKP 181 >UniRef50_A4EBM2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBM2_9ACTN Length = 195 Score = 159 bits (401), Expect = 9e-38, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 82/134 (61%), Gaps = 5/134 (3%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 S W ++ + C +E++ S T + D RFG V +P+ AD+ +V G+ + Sbjct: 6 SRSPWVIHYDGSSCNGCDIEVLASLTPLFDAERFGV-VNTGNPKHADIFLVTGSVNAQNL 64 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 PV++++Y+QMLEPK V++ G CA SGG++ D Y+V+ GVD+ IPVDVY PGC RPE + Sbjct: 65 PVVRQIYNQMLEPKCVVACGICACSGGVFRDAYNVIGGVDRAIPVDVYAPGCAIRPETVI 124 Query: 167 QALMLLQESIGKER 180 A++ + ++ Sbjct: 125 DAIVEACGILDQKE 138 >UniRef50_A8A9X3 NADH-quinone oxidoreductase, B subunit n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9X3_IGNH4 Length = 207 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 17/190 (8%) Query: 40 GKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVA 99 + + + W R+NS+W + G+ CC +EM+ + A HD R G + RA+PRQ D++++ Sbjct: 18 APVKEALKWSRRNSLWLLHLGIMCCAIEMMQAAFAFHDFERLGV-LARATPRQVDVILIN 76 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIY-SVVQGVDKFIP-------V 151 G K+A ++RL+ Q P++VI MG CA +GG + V+ G+ + I Sbjct: 77 GPVNRKLAERLRRLFMQTPGPRFVIVMGECAINGGPWWQSDYVLDGIHEVIESLPEEYRK 136 Query: 152 DVYI---PGCPPRPEAYMQALMLLQESIGKE-----RRPLSWVVGDQGVYRANMQSERER 203 DV++ GCPPRPE ++A++ ++E I + + ++G + + Sbjct: 137 DVHVVNLAGCPPRPEGLLRAILKMEELINEGDLARAPLTRYRLHDEEGSDKKVVDPMLRY 196 Query: 204 KRGERIAVTN 213 R A Sbjct: 197 AYNNRKAGEK 206 >UniRef50_C7IWD0 Os01g0791600 protein n=3 Tax=Oryza sativa Japonica Group RepID=C7IWD0_ORYSJ Length = 379 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 61/104 (58%), Positives = 76/104 (73%), Gaps = 3/104 (2%) Query: 73 TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANS 132 + D R+G V R+SPRQADL++ AGT KMAP + RLY+QM EPK+VI+MGAC + Sbjct: 150 GSRFDFDRYGL-VPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTIT 208 Query: 133 GGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 GGM+ D YS V+GVDK IPVDVY+PGCPP+PEA + AL L Sbjct: 209 GGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDALTKLLG 252 >UniRef50_B6YT72 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=3 Tax=cellular organisms RepID=B6YT72_THEON Length = 266 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 25/176 (14%) Query: 52 NSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 S+W ++ + C +E++ T +D R G +++ SPR AD ++V+G + Sbjct: 5 KSVWVFHVDSGSCNGCDIEILDVLTPYYDAERLGIKLV-PSPRHADALLVSGPLTRQTYY 63 Query: 109 VIQRLYDQML-EPKWVISMGACANSGGMY-DIYSVVQGVDKF---------IPV------ 151 ++ Y+ M +P+ V+++G CA+SGG++ + Y + + I V Sbjct: 64 AVKAAYEAMPPKPRIVVAIGTCASSGGIFYNGYPIYNPNPERGSDRLRTGGIEVLLAEYG 123 Query: 152 ---DVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD-QGVYRANMQSERER 203 D+YIPGCPP PE + L L K+ + + + + V ER Sbjct: 124 KKPDMYIPGCPPSPEEILYGLAQLLGLKEKKMKGEYYYADEIEFVLPERPIEERIY 179 >UniRef50_D2RET0 NADH-quinone oxidoreductase, B subunit n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RET0_ARCPR Length = 709 Score = 156 bits (394), Expect = 5e-37, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 6/167 (3%) Query: 45 MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 + WG K S+WP + +CC VE+ ++ +D R G + RQ +L++V G Sbjct: 2 LKEWGTKWSLWPVHLVTACCGVELAHAYACGYDAERIG-SLNYGICRQTNLIIVEGAITR 60 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 KMA V++ ++QM PK+VI MGAC GG++ + Y +V+ D V++PGCPP PE Sbjct: 61 KMARVLRITWEQMPNPKFVIVMGACGIKGGLFKNSYHMVRPWDVVPVD-VFVPGCPPTPE 119 Query: 164 AYMQALMLLQESIGKER---RPLSWVVGDQGVYRANMQSERERKRGE 207 A ++ ++ LQ+ I + + + + + +E + Sbjct: 120 ALIRGIVALQKKIEGKEDFDKFEEVSIEVEKGKVRKLPPLKEFRVEN 166 >UniRef50_Q12F15 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Proteobacteria RepID=Q12F15_POLSJ Length = 181 Score = 155 bits (393), Expect = 7e-37, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 10/184 (5%) Query: 13 ENDRYPLQKQEIVTDPLEQEVN-KNVFMGKL--NDMVNWGRKNSIWPYNFG-LSCCYVEM 68 + + + I+T+P + + + ++ + ++ G+ +I + G + C +E+ Sbjct: 2 WHILKQIARTGIITEPAPGIDDAQRTAIERIHRDILLILGQALTIRAVDAGSCNGCELEI 61 Query: 69 VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 +++ G + + ASPR AD+++V G M ++R YD EPK V+++G Sbjct: 62 HALNNPYYNIEGLGIKFV-ASPRHADMLLVTGPVSRHMDEALRRTYDATPEPKLVVAVGD 120 Query: 129 CANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVV 187 C +GG++ D Y+ V IPVDV +PGCPP P ++ ++ ++RRP + Sbjct: 121 CGCTGGIFGDSYASCGRVANVIPVDVTVPGCPPPPIEILRGILTAV----RQRRPGTAGD 176 Query: 188 GDQG 191 G Sbjct: 177 NPAG 180 >UniRef50_Q0W6T1 [NiFe]-hydrogenase, small subunit (EchC-like) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W6T1_UNCMA Length = 135 Score = 155 bits (392), Expect = 1e-36, Method: Composition-based stats. Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 7/130 (5%) Query: 51 KNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S W Y+ G C +E+V S +D+ R G ++ SPR AD+++V G Sbjct: 5 KRSPWVYHAHAGGCVGCDIELVASMGPRYDLERLGVRLV-PSPRYADVLLVTGPVPLHTK 63 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY---DIYSVVQGVDKFIPVDVYIPGCPPRPEA 164 P ++R+Y Q EPK VI++GAC S G++ + YS+ VDK IPVDV IPGCPP+PEA Sbjct: 64 PFLERVYAQTPEPKRVIAIGACGCSCGVFIDDENYSIAGPVDKIIPVDVKIPGCPPKPEA 123 Query: 165 YMQALMLLQE 174 M+ ++ + Sbjct: 124 IMEGIIKVLR 133 >UniRef50_C5CEV5 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=C5CEV5_KOSOT Length = 137 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 5/130 (3%) Query: 51 KNSIWPYNFG---LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 K S+W ++ + C +E++ T +D+ RFG +++ S R AD+++V G K++ Sbjct: 9 KRSLWVFHVSASPCNNCDIEILDMLTPRYDLERFGIKLV-GSVRHADVLLVTGMGGCKVS 67 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 + R+Y+Q +P +VI++G C +G + + Y+ +D+F+PVD+YIPGCPP+PE + Sbjct: 68 ERVIRIYNQAPKPVFVIAVGTCPVAGATFKESYTRCGPLDRFVPVDLYIPGCPPKPETMI 127 Query: 167 QALMLLQESI 176 L L + Sbjct: 128 AGLSELLGRL 137 >UniRef50_Q978D5 Formate hydrogenlyase subunit 2 n=2 Tax=Thermoplasmatales RepID=Q978D5_THEVO Length = 222 Score = 154 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Query: 8 IDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYV 66 I P+G + + + D + + K D + R ++P + G C + Sbjct: 47 ITPDGWVMEKCIFCRRCLPDYKPTGDQRIFTIKKTED--TFRRSFHVFPIDSGACGACNM 104 Query: 67 EMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISM 126 E ++ F+ +D R G + +PR AD ++V G M + R Y+ M EPK VI+M Sbjct: 105 EFLSIFSPQYDANRLGI-FMVNTPRYADALIVMGVMTPGMKEALDRAYEAMPEPKLVIAM 163 Query: 127 GACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 GACA +GG+ +D+ +V I GCPP P + AL + Sbjct: 164 GACAVTGGIMGE----NPLDRE-KYNVEIAGCPPSPYTLIAALNAAMK 206 >UniRef50_B6YWP9 NADH dehydrogenase (Ubiquinone), 20 kDa subunit n=4 Tax=Archaea RepID=B6YWP9_THEON Length = 191 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 21/175 (12%) Query: 51 KNSIWPYNFG---LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 KNS+W ++ + C +E++ F +DV R G +++ SPR AD + G + Sbjct: 3 KNSLWVFHLNSGSCNGCDIEILNIFAPRNDVERLGIKLV-GSPRHADAIAFTGPITRECL 61 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFI-----------PVDVYI 155 P + + EPK V+++GACA GG+ YD YSV+ GV + P V+I Sbjct: 62 PKVIDALKAVPEPKVVLAIGACACGGGIWYDTYSVIGGVKELYRILKEEYNMEPPATVFI 121 Query: 156 PGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRA-----NMQSERERKR 205 PGCPP+PEA + + + + +++ +V ++ V + SE E+ R Sbjct: 122 PGCPPKPEAIIYGVAVASGMLESKQKKTVYVEPEESVANEKLMIAELISETEKTR 176 >UniRef50_Q2T5T7 Formate hydrogenlyase subunit 7 n=21 Tax=Bacteria RepID=Q2T5T7_BURTA Length = 174 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 6/168 (3%) Query: 16 RYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTA 74 + +P Q + + L+ + GR I + G + C +E+ Sbjct: 11 TGRPDEPAPAGEPAWQRDAQPIRQEILDIL---GRALCIRAIDAGSCNGCELELNALGNP 67 Query: 75 VHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGG 134 +++ G + + ASPR AD++++ G M ++ YD PK V++ G CA +GG Sbjct: 68 YYNIEGLGIKFV-ASPRHADMLLITGPLTLNMRDAVRLAYDATPAPKLVVAAGDCACTGG 126 Query: 135 MY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 ++ Y+V V+ +PVDV I GCPPRP ++ + E + R Sbjct: 127 VFAGSYAVCGPVETLVPVDVAIAGCPPRPIDLLRGIRGALERVRTGPR 174 >UniRef50_Q2WGH7 NADH dehydrogenase subunit K (Fragment) n=1 Tax=Selaginella uncinata RepID=Q2WGH7_SELUN Length = 215 Score = 152 bits (384), Expect = 8e-36, Method: Composition-based stats. Identities = 68/174 (39%), Positives = 91/174 (52%), Gaps = 4/174 (2%) Query: 8 IDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVE 67 I + N + + ++ ND N R S P +G SCC+ E Sbjct: 14 IGNDSVNPVVNSMGRPTPGVDRAATPD-SIIPTTPNDFTNRARLPSSRPPPYGTSCCFTE 72 Query: 68 MVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMG 127 + D R G V R+SPRQADL++ AGT TKMAP + R Y+Q EPK I+MG Sbjct: 73 FAPLIGSRSDSDRHG-SVPRSSPRQADLIITAGTATTKMAPSLVRSYEQTPEPKHAIAMG 131 Query: 128 ACANSGGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 AC +GGM D +S V+GVDK IP D Y PG PP+PEA + A + +E + +E Sbjct: 132 ACTVTGGMLSTDPHSTVRGVDKSIPADTYPPGRPPKPEAIVDATIKPREKVSRE 185 >UniRef50_A6Q6W5 Ni-Fe hydrogenase, small subunit HycG n=3 Tax=Epsilonproteobacteria RepID=A6Q6W5_SULNB Length = 168 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 3/153 (1%) Query: 26 TDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAE 84 L++E+ K N + +I + G + C E +D+ R G Sbjct: 17 DTALDKELEAIKREIKENVKKKFAGSLAIRMVDSGSCNACEAECNALSNPYYDLERLGI- 75 Query: 85 VLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQ 143 ASPR AD+M++ G M P + Y Q+ EPKWVI++GAC ++ ++V Sbjct: 76 YFVASPRHADVMLLNGLMTFNMTPHVLDAYKQIPEPKWVITLGACPVMEAPFEKTFAVKA 135 Query: 144 GVDKFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 +PV +IPGCPP P ++ L+ + I Sbjct: 136 PAADHLPVAHHIPGCPPEPLEIIRGLLEFLKKI 168 >UniRef50_Q2H7B9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2H7B9_CHAGB Length = 189 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 47/182 (25%) Query: 2 DYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVN--KNVFMGKLNDMVNWGRKNSIWPYNF 59 Y+ + P R P + + E+ N + L+ ++NW R+ S+WP +F Sbjct: 45 RYSTEQTSP-ARQPRIPPPVRPTLAVSTEKRPNSVTEYALSTLDGLINWARQGSLWPMSF 103 Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 GL+CC +EM+ +D R G + RASPRQ+D+M+VAG Sbjct: 104 GLACCAIEMMHLSMPRYDNDRQGI-IFRASPRQSDVMIVAG------------------- 143 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 GVD+ +PVD+Y+PGCPP EA + LQ+ + Sbjct: 144 ------------------------GVDRIVPVDIYVPGCPPTAEALQYGIFQLQKKMAAG 179 Query: 180 RR 181 +R Sbjct: 180 QR 181 >UniRef50_Q24ST9 Formate hydrogenlyase subunit 7 n=2 Tax=Desulfitobacterium hafniense RepID=Q24ST9_DESHY Length = 155 Score = 149 bits (376), Expect = 6e-35, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%) Query: 51 KNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPV 109 I + G + C EM ++D+ RFG + + ASPR AD+++ G T + Sbjct: 32 SWHIRHLDCGSCNGCDWEMSALLNPIYDLQRFGLDFV-ASPRHADILMCTGPMSTHLIQA 90 Query: 110 IQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQA 168 Y+ PK +I++G CA GGM+ + Y+ GV + +PVD+ IPGCPP P+ ++ Sbjct: 91 ALATYEGTPNPKRIIAVGDCALDGGMFKEAYAAHNGVGEALPVDIKIPGCPPSPDELLKV 150 Query: 169 LMLLQ 173 L+ L+ Sbjct: 151 LLQLK 155 >UniRef50_D0L1N9 NADH ubiquinone oxidoreductase 20 kDa subunit n=3 Tax=Proteobacteria RepID=D0L1N9_HALNC Length = 274 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 8/148 (5%) Query: 43 NDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGT 101 + +GR I + G + C E+ +++ R G SPR ADL++V G Sbjct: 129 KSLAGFGRSLHIRHVDAGSCNGCESEISALLNPFYNLHRLGV-FFTPSPRFADLLLVTGP 187 Query: 102 CFTKMAPVIQRLYDQMLEPKWVISM-GACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP 160 M + R ++ M EP+WV+++ G Y+ QG+D +PVD+++PGCPP Sbjct: 188 VTEVMREPLLRTFEAMPEPRWVMALGTCATGGGTNGGGYACHQGLDGILPVDIWLPGCPP 247 Query: 161 RPEAYMQALMLLQESIGKERRPLSWVVG 188 P A ++AL++L + RRP G Sbjct: 248 NPAAIIEALLVLLD-----RRPQQVHGG 270 >UniRef50_UPI000194DF39 PREDICTED: similar to NADH-ubiquinone oxidoreductase Fe-S protein 7 n=1 Tax=Taeniopygia guttata RepID=UPI000194DF39 Length = 183 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 39/152 (25%) Query: 35 KNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQAD 94 + KL+D+VNW R++S+WP FGL+CC VEM+ +D+ RFG V RASPRQAD Sbjct: 69 GEYVIAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGV-VFRASPRQAD 127 Query: 95 LMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVY 154 +M+VAGT KMAP +++ +P G Sbjct: 128 VMIVAGTLTNKMAPALRK------KP---------PCRG--------------------- 151 Query: 155 IPGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 CPP EA + ++ LQ I +E+R W Sbjct: 152 --RCPPTAEALLYGILQLQRKIKREKRMQIWY 181 >UniRef50_C1XWY8 Ni,Fe-hydrogenase III small subunit n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWY8_9DEIN Length = 290 Score = 143 bits (361), Expect = 4e-33, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 12/165 (7%) Query: 52 NSIWPYNFGLSCCY-VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVI 110 + + G + E+ + HD++RFG V+ ASPR AD ++V G M + Sbjct: 128 LAFREVSAGNTGLDDTEVALAGNPFHDMSRFGFSVV-ASPRHADALLVTGPVSQNMREAL 186 Query: 111 QRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 R Y EPK V+++G A G ++ + +VV GVD+ +PVDVY+PG P RP + + L Sbjct: 187 WRTYQATPEPKGVVAVGNEAIGGEIFAESAAVVGGVDQVVPVDVYVPGSPARPASILHGL 246 Query: 170 MLLQESIGK--------ERRPLSWVVGDQGVYRANMQSERERKRG 206 +LL + E R V + GV ++ ++ER + G Sbjct: 247 LLLSGQTQQVLVGGRLHEERTQ-VVSSEAGVEASSRRAERGEEHG 290 >UniRef50_B8IYV4 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Desulfovibrio RepID=B8IYV4_DESDA Length = 254 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 3/133 (2%) Query: 44 DMVNWGRKNSIWPYNF-GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC 102 + R + + G + C + T V D+ RFG + + ASPR AD +V+ G Sbjct: 123 KFAIFRRSLKLRQVSAAGCNACEADCNVLGTLVFDLPRFGIDFV-ASPRHADGIVLTGPV 181 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPR 161 M Y+ EP+ V+++GACA SGG++ D G+ +PVD+++PGCPP Sbjct: 182 SENMRLAAIDTYNATPEPRLVVAVGACAISGGLFRDAPQCNNGIADILPVDLFVPGCPPN 241 Query: 162 PEAYMQALMLLQE 174 P + L++L+E Sbjct: 242 PWTILDGLLMLRE 254 >UniRef50_A1RWL1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWL1_THEPD Length = 245 Score = 142 bits (359), Expect = 7e-33, Method: Composition-based stats. Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 3/153 (1%) Query: 50 RKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 R + + G + C +E+ + T DV R G +++ SPR AD+++V G + P Sbjct: 15 RSVYLLRVDSGSCNGCDIEVFDALTPYFDVERLGVKLVL-SPRMADVILVTGPVTRQFLP 73 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGM-YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 V++ Y+ +P V++ GACA GG+ YD Y GVDK IPVDVYIPGCPPRP A + Sbjct: 74 VLKATYEAAPKPCVVVACGACACGGGIWYDTYGTAGGVDKVIPVDVYIPGCPPRPHAILH 133 Query: 168 ALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 + + + + ++ + + A E Sbjct: 134 GVAVALDILEQKVKRSETKADAESFKPALPSLE 166 >UniRef50_Q21TB3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Proteobacteria RepID=Q21TB3_RHOFD Length = 254 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 5/132 (3%) Query: 46 VNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFT 104 +GR + + G S C +E+ D+ R+G +++ ASPR AD +V++G Sbjct: 122 KRFGRSLKLRSVSAGGCSGCEMEINALSNVNFDLGRYGIDIV-ASPRHADALVLSGPITR 180 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVV--QGVDKFIPVDVYIPGCPPRP 162 MA +Q +D + EPK VI++GACA SGG++ + Q +D F P +Y+PGCP P Sbjct: 181 NMAQALQICWDAIPEPKLVIAVGACAISGGVFADSDALDRQFLDNFKPA-LYVPGCPAHP 239 Query: 163 EAYMQALMLLQE 174 ++ +M L Sbjct: 240 LTFISGIMDLLG 251 >UniRef50_D2PJN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=9 Tax=Sulfolobus RepID=D2PJN5_SULIS Length = 201 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 11/164 (6%) Query: 13 ENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTS 71 + + + + + K + + R ++P + G C +E+ Sbjct: 48 WIKERCVFCRRCYPNYRPNLNPRIYTINKTQPL--FKRSFYLYPIDSGTCGGCNMELKLI 105 Query: 72 FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN 131 + +D+ RF +PR AD +VV G KM V+++ Y+ M EPK VI +GACA Sbjct: 106 SSPEYDMTRFSI-FFTNTPRHADALVVMGVMTEKMKEVLKKAYEAMPEPKVVILLGACAI 164 Query: 132 SGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 SGG+ ++ + I GCPP P ++ALM ++ Sbjct: 165 SGGIIGEG---VPLEAVVE----ISGCPPNPFTILEALMKVKGK 201 >UniRef50_B6YTX0 Hydrogenase 4, component I or formate hydrogen lyase, subunit 7 n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTX0_THEON Length = 273 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 79/193 (40%), Gaps = 34/193 (17%) Query: 52 NSIWPYNFG---LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 SIW ++ + C +E++ T +DV RFG +++ SPR A ++V+G + Sbjct: 8 RSIWVFHLNTGSCNGCDIEIIDVLTPFYDVERFGIKLV-GSPRHAHALLVSGPLTRQAYY 66 Query: 109 VIQRLYDQML-EPKWVISMGACANSGGMYDI----------------YSVVQGVDKFI-- 149 + M EP+ ++++G C SGG++ Y G+ + I Sbjct: 67 GAKETIKAMPPEPRVIVAIGTCTCSGGIFYNGYPVYRRPESGREGSEYPRRGGIAELIAD 126 Query: 150 ---------PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 PV +YIPGCPPRPE + + L + K+ + + ++ Sbjct: 127 LRDEGEKVGPV-IYIPGCPPRPEEIIYGIAQLVGLVEKKLSYQEY-SDELVPFKLPEGPL 184 Query: 201 RERKRGERIAVTN 213 ER R + Sbjct: 185 EERIRLTLMERLR 197 >UniRef50_Q58758 Uncharacterized protein MJ1363 n=17 Tax=Euryarchaeota RepID=Y1363_METJA Length = 151 Score = 140 bits (353), Expect = 3e-32, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 13/148 (8%) Query: 45 MVNWGRKNSIWPY---NFGLSCCYVEM-VTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 + RK I G + C +E+ F+ +D ++ L +PR+AD++VV G Sbjct: 5 IKKIARKKCIHVMLVYTGGCNACDIEVVNAIFSPFYDAEQYNV-FLTFNPREADILVVTG 63 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI--------YSVVQGVDKFIPVD 152 +A ++++Y+++ EPK V+++GACA GG+Y V V+ IPVD Sbjct: 64 CVTKVVAESLRKIYEKIPEPKAVVAVGACALMGGVYKNIGGDLGTSDFVAGPVENIIPVD 123 Query: 153 VYIPGCPPRPEAYMQALMLLQESIGKER 180 V +PGC PRPE + ++ + + + Sbjct: 124 VKVPGCAPRPEDIIAGIVKALPKVIEGK 151 >UniRef50_A4YGN5 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGN5_METS5 Length = 203 Score = 139 bits (351), Expect = 6e-32, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 11/170 (6%) Query: 6 TRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LSCC 64 T + + + + + V + R ++P + G C Sbjct: 40 TDAIGEEWKQERCIFCRACEPVFSPTGETLTPRVERSD--VTFKRSFYLYPLDAGSCGGC 97 Query: 65 YVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVI 124 +E+ + +D+ RFG +P+ AD +++ G +M VI+R YD + PK VI Sbjct: 98 NLELRLISSPQYDMTRFGI-FFTNTPKHADALLIMGNLGKRMEEVIRRAYDVIPSPKLVI 156 Query: 125 SMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 +G CA SGG+ I ++G DV +PGCPP P + + AL+ + Sbjct: 157 LLGTCAISGGVTGIPPDIRG-------DVIVPGCPPTPASILDALIKAKG 199 >UniRef50_B5E8B5 NADH ubiquinone oxidoreductase 20 kDa subunit n=13 Tax=Bacteria RepID=B5E8B5_GEOBB Length = 332 Score = 139 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 73/162 (45%), Gaps = 3/162 (1%) Query: 54 IWPYNFGLSCCYVEMVTSFT-AVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQR 112 + C VE+ + DV + G P +AD++++ G + R Sbjct: 16 FRINTGSCNGCDVELAVTAAVDEFDVEQLGCRY-TEEPHEADILLITGPLTVRARNEALR 74 Query: 113 LYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALML 171 LY + E K +++G C SGG++ D Y+V V +++PVD+ +PGCPPRP+A + + Sbjct: 75 LYAEAPETKVTVAVGVCPVSGGVFRDSYAVDGPVQRYLPVDLNVPGCPPRPQALLAGIAQ 134 Query: 172 LQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTN 213 ++ + + V + + + ++ R++ Sbjct: 135 ARDLWRARSKGVDAVFAAPPLAKPADEPAQQFPIRGRMSFDP 176 >UniRef50_C5A2Q7 Formate hydrogenlyase II subunit H (Mhy2H) n=3 Tax=Thermococcus RepID=C5A2Q7_THEGJ Length = 283 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 33/185 (17%) Query: 50 RKNSIWPYNF---GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKM 106 R S++ ++ + C +E+ T +D R G L ASPR A M G + Sbjct: 2 RLRSLYVFHLDTGACNGCEIELFDILTPYYDAERLGVR-LAASPRHAHAMAATGPLTRQA 60 Query: 107 APVIQRLYDQML-EPKWVISMGACANSGGMYDI----------------YSVVQGVDKFI 149 + M +P+ ++++G CA SGG++ Y G+ + + Sbjct: 61 YYAAKEAIKAMPPKPRIIVAIGTCACSGGIFYNGYPIYRRPESGREGQEYPRRGGIFELV 120 Query: 150 -----------PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 PV VYIPGCPPRPE + + L + K+ + + Sbjct: 121 QDLRDEGEYVGPV-VYIPGCPPRPEEILYGVALALGLVEKQVKGEYYTEEVGFELPEYPI 179 Query: 199 SERER 203 ER R Sbjct: 180 EERIR 184 >UniRef50_C5U7Y6 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Euryarchaeota RepID=C5U7Y6_9EURY Length = 154 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 10/125 (8%) Query: 56 PYNFGLSCCYVE-MVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLY 114 Y G + C +E + F+ +D ++ L +PR+ D+++V+G + ++++Y Sbjct: 23 VYTGGCNGCDIEAVNAVFSPYYDAEQYNV-FLTFNPRETDILIVSGCVTKFVKESLRKIY 81 Query: 115 DQMLEPKWVISMGACANSGGMYDI--------YSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 +++ EPK V+++G+CA +GG+Y V V+ IPVDV +PGC PRPE + Sbjct: 82 EKIPEPKAVVAIGSCALTGGVYKNIGGDLGTSDFVAGPVENIIPVDVKVPGCAPRPEDII 141 Query: 167 QALML 171 ++ Sbjct: 142 SGIVK 146 >UniRef50_C7JEU9 NADH-ubiquinone oxidoreductase 20 kDa subunit n=8 Tax=Acetobacter pasteurianus RepID=C7JEU9_ACEP3 Length = 165 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 8/128 (6%) Query: 55 WPY------NFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 WP G C +E+ A +D+ G + SPR AD++++ G MAP Sbjct: 26 WPLLLFHVDTGGCGGCGMELQALRYAPYDMEGAGFGFVT-SPRNADVLLITGALTRAMAP 84 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQ 167 V++ + M PK +I++G+CA GGM+ Y+V+ G+++ + +D+ IPGCPP P+ + Sbjct: 85 VLEAAWQAMPTPKGLIAVGSCALDGGMFPENYTVLGGLERRVSIDLKIPGCPPAPQDVLN 144 Query: 168 ALMLLQES 175 L L Sbjct: 145 GLCSLFGK 152 >UniRef50_A1SQ82 NADH ubiquinone oxidoreductase, 20 kDa subunit n=15 Tax=Actinomycetales RepID=A1SQ82_NOCSJ Length = 162 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 I + G + C +E+ +F V+D R+GA ++ ASPR AD+++V G M Sbjct: 35 AGSVQIRHVDAGSCNGCEIEVGGAFGPVYDAERYGARLV-ASPRHADVVLVTGVVTHNML 93 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 ++R + P+ V+++G CA + G + Y V V + VD+ +PGCPP P A + Sbjct: 94 EPLRRTVEATPRPRLVLAVGDCARNCGAFKGGYGVAGAVHDAVDVDLEVPGCPPEPAAIV 153 Query: 167 QALMLLQES 175 AL + Sbjct: 154 DALRRVTGR 162 >UniRef50_A3ETD3 Putative hydrogenase-3 (HycG) n=3 Tax=Leptospirillum RepID=A3ETD3_9BACT Length = 169 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 3/128 (2%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 G SI + G + C +E+ + + R G + ASPR ADL++V G +M Sbjct: 33 GGSLSIRHVDAGSCNACELELHAMNGSYYAPERDGIRFV-ASPRHADLLLVTGPVSCQME 91 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 + ++ M PK V+++G CA GG++ +V GVD P +PGCPP P + Sbjct: 92 QPLLDTHEAMASPKTVLAVGDCACQGGVFRGSPAVRNGVDGLFPEARKVPGCPPSPSDIL 151 Query: 167 QALMLLQE 174 +AL L Sbjct: 152 RALRGLSR 159 >UniRef50_Q6L0U2 Formate hydrogenlyase subunit 7 n=1 Tax=Picrophilus torridus RepID=Q6L0U2_PICTO Length = 202 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 73/171 (42%), Gaps = 12/171 (7%) Query: 5 LTRIDPNGENDRYPLQKQEIVTDP-LEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFG-LS 62 I N + R + + + + + ++ G ++ + + +I+ + G Sbjct: 41 TNAISNNTWDSRRCIYCRRCYPEYNINGNDDISIISGSIDK--KFRKSLNIYSIDSGTCG 98 Query: 63 CCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKW 122 C E+ + +D+ R+ +PR AD ++++G M VI M +P + Sbjct: 99 ACNSELFSISIPEYDLTRYHI-FFTNTPRHADAIILSGIYNESMKDVIDNALGAMPKPGY 157 Query: 123 VISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 +I +GACA SGG+ ++ V + IPGCPP P ++ L L Sbjct: 158 LILLGACALSGGIIGSGHEIKAV-------LEIPGCPPNPYTILKGLRRLM 201 >UniRef50_B5ZJ00 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZJ00_GLUDA Length = 166 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 3/129 (2%) Query: 49 GRKNSIWPY-NFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 R +++ G C +E+ A + + G + A+PR A++++V G MA Sbjct: 22 ARPLAVFHVETGGCEGCAMEVAALDGAAYGLPATGIAFV-ATPRLAEVLLVTGPLTRAMA 80 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 PV++ + M EP+ ++++GACA GG + Y+V+ G++ +D+ +PGCPP P A + Sbjct: 81 PVLEAAWHAMPEPRALVAVGACAIDGGPFPENYAVLGGLEGRATLDMTVPGCPPSPAAIL 140 Query: 167 QALMLLQES 175 L + E Sbjct: 141 AGLARVLER 149 >UniRef50_B1ZSE7 NADH ubiquinone oxidoreductase 20 kDa subunit n=19 Tax=Bacteria RepID=B1ZSE7_OPITP Length = 285 Score = 130 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 4/155 (2%) Query: 14 NDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVN-WGRKNSIWPYNFGLSCCY-VEMVTS 71 + R ++++E + + + + +GR + + G S ++ Sbjct: 115 DHRMAVRRREDLVLGAPGQEEVRLAAALDEKLRKMFGRSLRLRQVSAGGSGAEEADLNVL 174 Query: 72 FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACAN 131 T D+ RFG + + ASPR AD +VV G M +++ ++ M PK VI++GA A Sbjct: 175 GTIGWDLGRFGIQFV-ASPRHADGLVVTGPVSKGMELALRKTWEAMPAPKIVIAVGAEAI 233 Query: 132 SGGMYDIYSVVQ-GVDKFIPVDVYIPGCPPRPEAY 165 SGG++ + V+ GVD +PVD+YIPG PP P Sbjct: 234 SGGVFAGHPQVRNGVDAIVPVDLYIPGWPPHPLTI 268 >UniRef50_A5FW77 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FW77_ACICJ Length = 164 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 3/135 (2%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 GR ++ + G C +E+ +A G ++ R AD+++V G +A Sbjct: 23 GRSLAVRHVDAGSCGGCEIEIAACRRLRGGMAAHGIAMVE-DLRAADILLVTGVATRNLA 81 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 +++ M P++V++ G CA GG++ +V+ GV IPVD+ I GCPP P + Sbjct: 82 EAVRKSLAGMAPPRFVVAAGDCALDGGVFKGVPAVLGGVQAVIPVDLLIAGCPPAPRQIL 141 Query: 167 QALMLLQESIGKERR 181 L+ L E+ +E R Sbjct: 142 AGLVALVEANAREPR 156 >UniRef50_B5ICA0 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICA0_9EURY Length = 179 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 13/136 (9%) Query: 42 LNDMVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAG 100 + + + + I+ + G S C E+ + +D+ R G PR AD+++V G Sbjct: 54 VRRKIPFNKSVHIFVLDVGSCSSCNREISLLNSPQYDLHRLGF-FFTPVPRHADILLVIG 112 Query: 101 TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP 160 KM PV++ Y+QM EPK V++ GACAN + ++K I VD + GCPP Sbjct: 113 EPTEKMIPVLKEAYEQMPEPKIVMTAGACAN-----------EKIEKIIKVDARVSGCPP 161 Query: 161 RPEAYMQALMLLQESI 176 +P A ++AL++L Sbjct: 162 QPIAILKALLMLTGRW 177 >UniRef50_D1B297 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B297_SULD5 Length = 138 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 3/121 (2%) Query: 61 LSCCYVEMVTS-FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 + C VE++ S G V P A++++V G + P +Q Q+ Sbjct: 15 CNGCDVEILASVLLPKFGFDALGC-VYTNDPTLANILLVTGAITARSTPYLQAALKQLPS 73 Query: 120 PKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGK 178 K V+++G C SGG++ D Y++ +D F+ VDV I GCPP P+ Q L E + Sbjct: 74 KKIVVALGICPISGGVFRDSYAITGPLDTFVDVDVNISGCPPSPKEIAQGLAQACELWRE 133 Query: 179 E 179 Sbjct: 134 R 134 >UniRef50_A6DAC3 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DAC3_9PROT Length = 140 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 3/128 (2%) Query: 54 IWPYNFGLSCCYVEMVTS-FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQR 112 + C VE+ S ++ D+ + G E + S AD+ ++ G + P ++ Sbjct: 10 FRINTGSCNGCDVEIAASVMSSRFDLQKLGCEYIETS-EDADIFMITGPVTARSLPFLKE 68 Query: 113 LYDQMLEPKWVISMGACANSGGMY-DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALML 171 + +P VIS+G C+ + G++ D Y ++ VD ++ VDV + GCPPRP+A ++ + Sbjct: 69 VIKNHKKPYVVISLGTCSVTCGIFRDSYPILGPVDSYVNVDVNVAGCPPRPQAILEGVKT 128 Query: 172 LQESIGKE 179 + + ++ Sbjct: 129 AIDILKRK 136 >UniRef50_UPI0000E81815 PREDICTED: hypothetical protein n=1 Tax=Gallus gallus RepID=UPI0000E81815 Length = 187 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 42/153 (27%), Positives = 62/153 (40%), Gaps = 48/153 (31%) Query: 35 KNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQAD 94 + KL+D++NW R+ S+WP C++ Sbjct: 80 GEYIVTKLDDLINWARRTSLWPSMLAQQNCHLH--------------------------- 112 Query: 95 LMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDV 153 P + L E CAN GG Y YSVV+G D+ +PVD+ Sbjct: 113 -------------PALLGLSAAEPE-------DGCANGGGYYHYSYSVVRGCDRIVPVDI 152 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 Y+PGCPP EA + ++ LQ+ I +ER+ W Sbjct: 153 YVPGCPPTAEALLYGILQLQKKIKRERKLQIWY 185 >UniRef50_Q5FU78 Putative uncharacterized protein n=1 Tax=Gluconobacter oxydans RepID=Q5FU78_GLUOX Length = 161 Score = 113 bits (282), Expect = 5e-24, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 2/114 (1%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G C++E+ + + + + G V + P AD +++ G A ++ R++ M Sbjct: 46 GCEGCFMEIESLNGSAFALEQAGF-VCVSDPADADWLLLTGAVTRVCAEMVDRVWRAMPP 104 Query: 120 PKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 + +I++GACA GG + Y+ + G++ PV I GCPP P+ ++AL L Sbjct: 105 GRSLIAVGACAVDGGPFPAGYATLGGLEALTPVRRSIAGCPPSPDDILRALQEL 158 >UniRef50_B9SD17 NADH-ubiquinone oxidoreductase I subunit j, putative n=1 Tax=Ricinus communis RepID=B9SD17_RICCO Length = 188 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 41/76 (53%), Positives = 58/76 (76%), Gaps = 2/76 (2%) Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMY--DIYSVVQGVDKFIPVDVYIPGCPPRPE 163 MAP + RLY+Q+ EPK+VI+MGAC +GGM+ D YS ++GVDK IPVD Y+ GCPP+PE Sbjct: 1 MAPSLVRLYEQIPEPKYVIAMGACTITGGMFSTDSYSTIRGVDKLIPVDAYLSGCPPKPE 60 Query: 164 AYMQALMLLQESIGKE 179 A + A+ L++ + +E Sbjct: 61 AVIDAITKLRKKLSRE 76 >UniRef50_C1GND6 NADH-ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GND6_PARBA Length = 159 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 4/98 (4%) Query: 19 LQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDV 78 +++ E ++ + + KN G ++ +VNW R+ S+WP +FGL+CC +EM+ +D Sbjct: 22 IREAERISSLISLQEEKN---GSIDKVVNWAREGSLWPLSFGLACCNMEMMAVSMPRYDQ 78 Query: 79 ARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQ 116 R G + RASPRQ+D+++VA + P + Q Sbjct: 79 DRLG-TIFRASPRQSDVIIVADAVTKQDGPRLAVTRGQ 115 >UniRef50_B0SCU6 Metal (Ni/Fe) hydrogenase, small subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SCU6_LEPBA Length = 273 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 7/116 (6%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + E+ SF +V D R G + ASP+ AD +V +G +M +Q +D + E Sbjct: 148 GNNTVESELNASFNSVFDSEREGIRCV-ASPKHADTIVFSGPISEQMEGPLQTAWDVLSE 206 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 P+ +I+ G A SGG++ + + D+YI G PPRP+ +Q LL Sbjct: 207 PRALIACGTEAVSGGLFPKGKIPK------EPDLYISGDPPRPDVILQGFRLLIGR 256 >UniRef50_UPI0001B52F0A hydrogenase 4, Fe-S subunit n=1 Tax=Shigella sp. D9 RepID=UPI0001B52F0A Length = 173 Score = 106 bits (265), Expect = 5e-22, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 23 EIVTDPLEQEVNKNVFMGKLND--MVNWGRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVA 79 ++T + Q + + K+ + + R ++ + G + C +E+ + T V D Sbjct: 3 PVLTQHVSQPITLDEQTQKMKQHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAE 62 Query: 80 RFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM 135 RFG +V+ +SPR AD+++ G M R Y+ + K +S GAC GG Sbjct: 63 RFGIKVI-SSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGAGGGF 117 >UniRef50_Q0BPG7 Formate hydrogenlyase subunit 7 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG7_GRABC Length = 174 Score = 106 bits (264), Expect = 6e-22, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 1/119 (0%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 + + G S C +E+ A +AR G + SP AD++++ G + I + Sbjct: 49 LHVESGGGSACLLELEALRAAPGLLARHGLRFVT-SPLHADILLITGDGCHNLTSAIHQA 107 Query: 114 YDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 ++ M P+W I++G A G+ G + IP D+ IPG PP + + L L Sbjct: 108 WEAMPGPRWAIAVGDGAAGDGLLRGSYASTGNMEEIPFDLVIPGSPPAADTILSGLRAL 166 >UniRef50_A0LSU0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSU0_ACIC1 Length = 269 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 21/132 (15%) Query: 51 KNSIWPYNFGLSCCY-VEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPV 109 + + G E++ V+D+ R G ASPR AD+++V G MA Sbjct: 124 SIHVRHVDAGSDGADEWEVLALLNPVYDIHRLGI-FFTASPRHADVLLVTGVGSRGMAAP 182 Query: 110 IQRLYDQMLEPKWVISMGACANSGG-MYDIYSVVQGVDKFIP------------------ 150 + R P VI+ G A SGG ++ Y+ G+ I Sbjct: 183 LARTLQAAPRPLVVIAAGTDAISGGLVHPTYATSGGIGDLIAATPDSAGATGAADGDPVR 242 Query: 151 VDVYIPGCPPRP 162 VD+++PG PP P Sbjct: 243 VDIWVPGSPPTP 254 >UniRef50_Q04P25 Metal (Ni/Fe) hydrogenase, small subunit n=4 Tax=Leptospira RepID=Q04P25_LEPBJ Length = 273 Score = 102 bits (255), Expect = 8e-21, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLE 119 G + E+ SF A+ D V+ ASP+ AD +V +G M + ++ M Sbjct: 145 GNNTTEAEINASFNALFDSEASKIRVV-ASPKHADALVYSGPVGPNMEEPLNTAWETMPS 203 Query: 120 PKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 PK +++ G+ A SGG++ + + + D++I G PPRP+ + A L Sbjct: 204 PKALVACGSEAVSGGLFKLGKLPK------EPDLFIGGDPPRPDVIISAFRYLMG 252 >UniRef50_Q58591 F420-non-reducing hydrogenase vhu subunit G n=13 Tax=Methanococcales RepID=VHUG_METJA Length = 288 Score = 96.3 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 46/197 (23%) Query: 59 FGLSCCYVEMVTS------FTAVHDVARFGAE-VLRASPRQADLMVVAGTCFTKMAPVIQ 111 G S C++ ++ ++ + P D+ +V G + + Sbjct: 14 CGCSGCHISLLDLHDKLLEVLPNLEIVYAPIIADPKEIPEGIDVFLVEGGIRNEHDEHL- 72 Query: 112 RLYDQMLEPKWVISMGACANSGGMYDIYSV------------------------------ 141 +++ + K VI+ G CA GG+ + ++ Sbjct: 73 -IHEIREKSKIVIAWGTCAAYGGIPGLGNLYKKEELLNYVYSTDSTENKGEIPSEEIPPL 131 Query: 142 ---VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRAN-M 197 V+ + FI VD IPGCPP P+ A++ L G+E + + +V D+ + + Sbjct: 132 EEYVKPIKDFIKVDYTIPGCPPTPKMIADAIIALLN--GEEPKLPTKIVCDECPRKKENV 189 Query: 198 QSER-ERKRGERIAVTN 213 E +R R Sbjct: 190 FPETFKRTHEGRPDPER 206 >UniRef50_C5A2R7 Coenzyme F420 hydrogenase subunit gamma (FrhG) n=1 Tax=Thermococcus gammatolerans EJ3 RepID=C5A2R7_THEGJ Length = 229 Score = 94.7 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 64/164 (39%), Gaps = 14/164 (8%) Query: 51 KNSIWPYNF-GLSCCYVEMVTSFTAVHDVARFGAEVLR-ASPR--QADLMVVAGTCFTKM 106 K + +F G C V ++ ++ + + LR S + + D+ ++ G Sbjct: 6 KLKVLHVDFAGCEGCNVSIIRAYPKLMNEIDLDISYLRDGSCQYGEYDVALITGGACMNE 65 Query: 107 APVIQRLYDQMLEPKWVISMGACANSGGMY----------DIYSVVQGVDKFIPVDVYIP 156 +++ L + + + V++ G+CA+ GG+ + Q ++ IPVD IP Sbjct: 66 PRILEELKEIREKARVVVAFGSCASLGGILRFARGGQEPRPDHRNFQPINSVIPVDYSIP 125 Query: 157 GCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 GCPP P+ R G + + ++ + Sbjct: 126 GCPPTPQMLQSFFKFFMAGNESRLRLFKVTAGLKKLSGFDLIDD 169 >UniRef50_B6YTV9 Coenzyme F420 hydrogenase gamma subunit n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YTV9_THEON Length = 225 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 13/154 (8%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLR---ASPRQADLMVVAGTCFTKMAPVIQRLYDQ 116 G C V ++ ++ + D+ LR + D+ ++ G +++ L + Sbjct: 13 GCEGCNVSIIRAYPKLMDLIELDISYLRKDECKLDEYDVAIITGGACMNEPRILEELKEI 72 Query: 117 MLEPKWVISMGACA--------NSGG--MYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYM 166 + V++ G+CA GG + Q ++ I VD IPGCPP P+ Sbjct: 73 REKAHTVVAFGSCATFSGILRFCRGGQEPRPDHRNFQPINSVIKVDYSIPGCPPTPQMLQ 132 Query: 167 QALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 + R + + ++ + Sbjct: 133 SFFKFYINGDERRLRLFKVSADIKKLSGFDLIDD 166 >UniRef50_Q6A6I9 NADH dehydrogenase subunit n=2 Tax=Propionibacterium acnes RepID=Q6A6I9_PROAC Length = 132 Score = 94.3 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 10/135 (7%) Query: 44 DMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCF 103 ++W S++ + L+CC VE S AV A E+ +P +++V+GT Sbjct: 2 KFIDWFADGSVYVVDLALACCGVE---SGAAVLANAPVREEIPDGAPI---VVLVSGTVT 55 Query: 104 TKMAPVIQRLYDQMLE--PKWVISMGACANSGGMYDIYS-VVQGV-DKFIPVDVYIPGCP 159 T +APV+ ++ P V++ GACA +GG Y + VV G+ D + D +IPGCP Sbjct: 56 TGLAPVVSDTVHELKRNHPVDVVAFGACACAGGPYWDSAGVVAGLPDAGVDADHWIPGCP 115 Query: 160 PRPEAYMQALMLLQE 174 P PE L +E Sbjct: 116 PGPETLTGLLASSRE 130 >UniRef50_Q8TYW2 Coenzyme F420-reducing hydrogenase, gamma subunit n=2 Tax=Methanopyrus kandleri RepID=Q8TYW2_METKA Length = 305 Score = 90.5 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 49/201 (24%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEV--------LRASPRQADLMVVAGTCFTKMAPVIQR 112 C+V ++ + D+ E+ + P ++ V+ G+ + ++ Sbjct: 14 CVGCHVSLLDLHEKLLDLLEDAIEIEYCYVLVDQKEIPEHVNVAVIEGSI--RNEEDLEV 71 Query: 113 LYDQMLEPKWVISMGACANSGGMYDIYSV------------------------------- 141 + V+++G CA GG++ + ++ Sbjct: 72 AEELREAADIVVAVGTCACYGGVHGLANLYQLDDILEWVFKETPTTDDEGETPEEVVPEL 131 Query: 142 ---VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 V+ + + I VD +PGCPP+PE+ + + + E +E + + ++ Sbjct: 132 FGYVRPLPEVIDVDYMLPGCPPKPESIAEVITAILE--DREPELPTTNLCEECPREKEDI 189 Query: 199 SERERKRGERIAVTNLRTPDE 219 E K PD+ Sbjct: 190 PIEEIKFRT---GQGRPDPDK 207 >UniRef50_P80491 Coenzyme F420 hydrogenase subunit gamma n=27 Tax=Euryarchaeota RepID=FRHG_METBF Length = 259 Score = 89.7 bits (221), Expect = 6e-17, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 19/145 (13%) Query: 56 PYNFGLSCCYVEMVTSFTAVH----DVARFGAEVLRASPRQ---ADLMVVAGTCFTKMAP 108 + G + C V + + + D A + A R D+ +V G+ + Sbjct: 10 VHMSGCTGCLVSLADNNLGLIKILDDYADLVYCLTLADVRHIPEMDVALVEGSVCLQDHE 69 Query: 109 VIQRLYDQMLEPKWVISMGACANSGGMY----------DIYSVVQGVDKFIPVDVYIPGC 158 ++ + + + K V+++G+CA G + + + I VDVYIPGC Sbjct: 70 SVEDIKETRKKSKIVVALGSCACYGNITRFSRGGQHNQPQHESYLPIGDLIDVDVYIPGC 129 Query: 159 PPRPEAY--MQALMLLQESIGKERR 181 PP PE + + L +E++ Sbjct: 130 PPSPELIRNVAVMAYLLLEGNEEQK 154 >UniRef50_A0LLU1 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLU1_SYNFM Length = 184 Score = 88.9 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 48/170 (28%) Query: 47 NWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP--------RQADLMVV 98 N R + W G + C++ ++ + DV G + SP D+ +V Sbjct: 7 NKVRLATAWF--GGCAGCHMSLLDLDERLIDV--VGLVDIVYSPVADIKVFPEGVDVTLV 62 Query: 99 AGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-----------------YDIY-- 139 G C + ++ K VI+ G CA +G + ++ Sbjct: 63 EGACCN--DENVHLAHEVRERSKIVIAFGDCAVTGNVPSMRNRLDRDQMINSVYFEGPGK 120 Query: 140 ---------------SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 V + + IPVD+++PGCPP PE A++ L + Sbjct: 121 PPPTSVLGHFLPTLIPKVLPLHQVIPVDIFLPGCPPDPERIWAAIVALLK 170 >UniRef50_O28898 Methylviologen-reducing hydrogenase, subunit gamma (VhuG) n=1 Tax=Archaeoglobus fulgidus RepID=O28898_ARCFU Length = 293 Score = 88.9 bits (219), Expect = 1e-16, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 71/190 (37%), Gaps = 51/190 (26%) Query: 53 SIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP----------RQADLMVVAGTC 102 + + + G S C + M+ ++D F V A+P + D + G Sbjct: 5 AFYIAH-GCSGCTMSMLDLGERMND---FRMRVAWAAPTLGDGKYDRIPEVDYAFIEGGI 60 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSV--------------------- 141 ++ ++ + + + + +++ G CA+ GG+ + ++ Sbjct: 61 --GLSEHVEIVRELREKSETLVAFGICASCGGIMGLANLHSKEEILEDVFGSAKSSVGDL 118 Query: 142 --------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVY 193 V+ +D + VD YI GCPP PE A ++I + R W+ + V Sbjct: 119 RIPEMLEFVKPLDSVVEVDCYIGGCPPTPEQIYNAF----KAIFEGER--GWITSGKSVC 172 Query: 194 RANMQSERER 203 ++ E+ Sbjct: 173 EFCSRNLSEK 182 >UniRef50_A6UVU9 Coenzyme F420 hydrogenase n=2 Tax=Euryarchaeota RepID=A6UVU9_META3 Length = 227 Score = 88.2 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 20/132 (15%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRAS--------PRQADLMVVAGTCFTKMAPVIQR 112 C V + ++ + DV GA L S +AD+++V G+ ++ Sbjct: 12 CCGCLVSLTDTYEKLLDV--LGAIDLVYSQTIADAREIPEADIILVEGSVCLDDHHAMEI 69 Query: 113 LYDQMLEPKWVISMGACANSGGMY----------DIYSVVQGVDKFIPVDVYIPGCPPRP 162 D + K ++++GACA +GG+ I+S + + + D+ IPGCPP P Sbjct: 70 AQDVGKKAKILVALGACAATGGITRFCRGGQMSKPIHSSFSPITEVVKCDLAIPGCPPSP 129 Query: 163 EAYMQALMLLQE 174 E + + E Sbjct: 130 EIIVGLITAAIE 141 >UniRef50_B5YB68 NAD-reducing hydrogenase HoxS delta subunit n=2 Tax=Dictyoglomus RepID=B5YB68_DICT6 Length = 180 Score = 83.9 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 60/165 (36%), Gaps = 49/165 (29%) Query: 53 SIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP--------RQADLMVVAGTC-F 103 S+W G S C++ + + ++ G E+ A+P D+ ++ G Sbjct: 8 SVW--CEGCSGCHMSFLDMDERLVELINKGLEI-NATPITDLKIPDEGTDIGIIEGAVAT 64 Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGM--YDIY---------------------- 139 ++ + ++ K ++++G CA GG+ Y Sbjct: 65 DHHEEEVKMMRERC---KIIVALGDCAVFGGIPTMRNYIPREELLERGYITTESTVDGKI 121 Query: 140 ----------SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + V++ I VD+Y+PGCPP +A L + E Sbjct: 122 PTSPEIGKHLPKTKAVNEVIKVDLYVPGCPPSADAIYYVLKEVLE 166 >UniRef50_C8X546 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X546_DESRD Length = 334 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 63/219 (28%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEV------------LRASPRQA-DLMVVAGTC-FTK 105 C V ++ + + ++ V L A P ++ D+ + G ++ Sbjct: 14 ACGGCDVSLLDTQGKLLELTAVADVVYWPVALDYKRSDLEALPEKSVDIGLFNGVVRTSE 73 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMYDI--------------------------- 138 A +RL ++ + +++ GACA GG+ + Sbjct: 74 QAEDARRLRERC---RVLVAYGACACHGGIPGLANQSDREEIFRVAYQDTVSTDNPDQIR 130 Query: 139 -----------------YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 + V+ + + + VD ++PGCPP PE + L ++Q + Sbjct: 131 PQQRTPVPGGEVTLPAFHDSVRALHQVVDVDYFLPGCPPTPERILDLLGVVQAYNAGDDL 190 Query: 182 PLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI 220 P + + E +R R+ L P EI Sbjct: 191 PPAGSILAPEATLCQECPRAETRRAGRMP--RLYRPHEI 227 >UniRef50_Q39QE2 F420-non-reducing hydrogenase subunit G n=5 Tax=Geobacter RepID=Q39QE2_GEOMG Length = 316 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 59/198 (29%), Gaps = 48/198 (24%) Query: 61 LSCCYVEMVTSFTAVHD------VARFGAEVLRASPRQADLMVVAGTC-FTKMAPVIQRL 113 S C+V +V + + R +A L +V+G + Sbjct: 14 CSGCHVAIVDLHEKILAVLESVTIQRCPVLTDVKDYPKAKLGLVSGAIRTEHDRHAAIEM 73 Query: 114 YDQMLEPKWVISMGACANSGGMYDIYSV-------------------------------- 141 +I+ G+CA GG+ +V Sbjct: 74 RKSCD---LIIAWGSCAVYGGIAGAGNVHSRQEIIDAVYIGNKTTATHAPPTKEVSALEP 130 Query: 142 -VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 V +D I VD+Y+PGC P P AL+ L E R G+ R + E Sbjct: 131 SVSPLDSVIDVDLYLPGCAPHPAFVFDALLALL-----EGRSPRTATGESVCARCRRKME 185 Query: 201 RERKRGERIAVTNLRTPD 218 + R + PD Sbjct: 186 KTEVDRIRKNSEGVPDPD 203 >UniRef50_Q8TXX1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Methanopyrus kandleri RepID=Q8TXX1_METKA Length = 238 Score = 80.1 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 10/109 (9%) Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGG----------MYDIYS 140 AD++ V G A +++L + V+S+G+CA +GG + Sbjct: 41 PDADILFVEGAVDFADAETLEKLEEAASAVSTVVSLGSCAATGGFERHVIGMRDPDRYHF 100 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD 189 V KF+ D I GCPP + L L+E E RP + GD Sbjct: 101 TVFPAAKFVETDYAINGCPPTTDVIASFLRALEEENEDELRPYEVLSGD 149 >UniRef50_B4U5S1 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5S1_HYDS0 Length = 320 Score = 79.7 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 34/177 (19%) Query: 33 VNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVH-DVARF---------- 81 +N N +N + R +W + +CC ++ S + V D+ Sbjct: 31 INPNEINDIINALKQKPRIPVLWFHGLECTCCSESLMRSSSPVFSDMVSLISLEYDDLIS 90 Query: 82 ---GAEVLRASPRQAD------LMVVAGTCFTKMAPVI---------QRLYDQMLEPKWV 123 G +L + + ++ + G+ + L + K + Sbjct: 91 ASCGENLLNYKKKIIEQYKGNYILAIEGSITEFEDGACCMVGGRSFNEELLEAAEGAKAI 150 Query: 124 ISMGACANSGGM---YDIYSVVQGVDKFIP--VDVYIPGCPPRPEAYMQALMLLQES 175 I+ G+CA+ G + Y + VD I V +PGCPP PE ++ + Sbjct: 151 IAWGSCASFGCVQVAYPNPTKSSSVDTIIKNKPIVKVPGCPPIPEVMASVIVYMLLK 207 >UniRef50_Q3M430 NADH ubiquinone oxidoreductase, 20 kDa subunit n=46 Tax=Bacteria RepID=Q3M430_ANAVT Length = 181 Score = 79.7 bits (195), Expect = 7e-14, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 43/156 (27%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRAS------PRQADLMVVAGTCFTKMAPVIQRL 113 G S C++ + + D+A V P D+++V G + + Sbjct: 13 GCSGCHMSFLDLDEWLIDLAAQADVVFSPFADIKEYPEGVDVVLVEGAIAN--EEHLTTI 70 Query: 114 YDQMLEPKWVISMGACANSGGMY-----------------------------------DI 138 + +IS G CA +G + + Sbjct: 71 KIVRERSQILISFGDCAVTGNVTALRNPLGSAEPVLQRCYIQAVDINPQIPQEPGIVPPL 130 Query: 139 YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 V V +PVD+Y+PGCPP AL L + Sbjct: 131 LDRVTPVHSIVPVDIYLPGCPPSATRIRAALEPLLQ 166 >UniRef50_B8G3U7 NADH ubiquinone oxidoreductase 20 kDa subunit n=6 Tax=Bacteria RepID=B8G3U7_CHLAD Length = 177 Score = 78.9 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 49/178 (27%) Query: 50 RKNSIWPYNFGLSCCYVEMVTS------FTAVHDVARFGAEVLRASPRQADLMVVAGTCF 103 R +IW G S C++ ++ A D+ ++ P D+ ++ G Sbjct: 5 RIATIWL--GGCSGCHMSLLDLDEWLIELAAQADLVYSPIADVKRFPSHVDVTLIEGAIA 62 Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYS----------------------- 140 ++ + K ++S G CA SG + + + Sbjct: 63 NN--EHLELAHIARRNSKIIVSFGDCAVSGNVTALRNPLGSPEQLLQQVYIEHSDPRGKI 120 Query: 141 ------------VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWV 186 V V + IPVD Y+ GCPP L E++ R+P + Sbjct: 121 PHEPGIVPVLLDKVMPVHQVIPVDYYLSGCPPSAPRI----RALLEALLTGRKPEVDI 174 >UniRef50_A5UM99 Coenzyme F420-reducing hydrogenase, gamma subunit, FrhG n=3 Tax=Methanobacteriaceae RepID=A5UM99_METS3 Length = 276 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 21/179 (11%) Query: 12 GENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMV-- 69 G KQ+I + P +E V K N R + + G + + + Sbjct: 11 GSEKPKAETKQKIESAPEVEETAAPVAETKQETATNKPRIG--YIHLSGCTGDGMSLTEN 68 Query: 70 -----TSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVI 124 T + D+ V + DL ++ G+ + + L + + + Sbjct: 69 YDILDVVLTEMVDIVYGQTLVDLWEMPEMDLCLIEGSVCLQDEHSVHELLEAREKSALIC 128 Query: 125 SMGACANSGGMYDIYSVVQ-----------GVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 + G+CA +G + Y+ + + VDV +PGCP PE + ++ L Sbjct: 129 AFGSCALNG-CFTTYARGGQQAQPKHESFLPISSLVKVDVALPGCPVAPEMIAKTVVAL 186 >UniRef50_Q00393 Coenzyme F420 hydrogenase subunit gamma n=3 Tax=Methanococcus RepID=FRHG_METVO Length = 243 Score = 77.8 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 36/153 (23%) Query: 56 PYNFGLSCCYVEMVTSFTAVHDVARFG-----------------------AEVLRASPRQ 92 + G + C + + ++ + D+ G + R P Sbjct: 7 IHMSGCTGCLISLTDTYEKLLDI--LGSVELVYALTLTGEKTEITETDDKILIERDIPGG 64 Query: 93 ADLMVVAGTCFTKMAPVIQRLYDQMLEPK-WVISMGACANSGGMY----------DIYSV 141 D+ +V G+ + + K ++++GACA SGG+ ++ Sbjct: 65 IDIALVEGSVCLDDHHSMDDILTTRKNSKKSLVALGACAASGGVTRFRRVGQMSQPSHAS 124 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + I VD+ +PGCPP E+ ++ L E Sbjct: 125 FVPIGDVIKVDLALPGCPPSTESIVKLLTAALE 157 >UniRef50_UPI0001C420D3 coenzyme F420 hydrogenase gamma subunit FrhG n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420D3 Length = 319 Score = 77.0 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 19/138 (13%) Query: 55 WPYNFGLSCCYVEM-------VTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMA 107 + + G + + + T T + D+ V + DL +V G+ + Sbjct: 95 YIHMSGCTGDGMSLTENYDILSTLLTDMVDIVYGTTLVDLWEMPEMDLALVEGSVCLQDE 154 Query: 108 PVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQ-----------GVDKFIPVDVYIP 156 ++ L + + V + G+CA +G + Y+ + + VD IP Sbjct: 155 HSVKELMEVREKAGLVCAFGSCAMTG-CFTRYARGGQLAQPKHESFVPISDLVKVDCAIP 213 Query: 157 GCPPRPEAYMQALMLLQE 174 GCP PE + ++ L Sbjct: 214 GCPASPEIIAKVVVALIN 231 >UniRef50_C8QXK1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXK1_9DELT Length = 178 Score = 77.0 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 41/154 (26%) Query: 60 GLSCCYVEMVTSF------TAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 G S C++ + ++A + P + DL ++ G T RL Sbjct: 14 GCSGCHMSFLDMDELLLELAPRLELAYSPLVDRKEFPDRVDLALLEGAVSTPEDEAKARL 73 Query: 114 YDQMLEPKWVISMGACANSG---------------------------------GMYDIYS 140 + V+++G CA G + + + Sbjct: 74 VRAH--SRLVVALGDCACQGNVPALRNRLDNEQLLDLVYRQQADGPAAAPPDRNVPPLLT 131 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + + I VD+++PGCPP P A ++AL + + Sbjct: 132 HSLPLHRVIAVDLFLPGCPPPPAAIVRALTAVLD 165 >UniRef50_B7QG38 NADH-plastoquinone oxidoreductase, putative n=1 Tax=Ixodes scapularis RepID=B7QG38_IXOSC Length = 162 Score = 75.1 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 32/48 (66%), Positives = 41/48 (85%), Gaps = 1/48 (2%) Query: 111 QRLYDQMLEPKWVISMGACANSGGMYD-IYSVVQGVDKFIPVDVYIPG 157 +++YDQMLEP+WVISMG+CAN GG Y YSVV+G D+ IPVD+Y+PG Sbjct: 78 RKVYDQMLEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPG 125 >UniRef50_A1SU83 Hydrogen dehydrogenase n=23 Tax=Proteobacteria RepID=A1SU83_PSYIN Length = 433 Score = 74.7 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 42/156 (26%) Query: 59 FGLSCCYVEMVTSFTA------VHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQR 112 G C++ + +++R ++ DL ++ G + R Sbjct: 266 AGCFGCHMSFLDMDERLIELLERVELSRSPLNDIKTCAPDCDLGLIEGAVCNTENIAVLR 325 Query: 113 LYDQMLEPKWVISMGACANSGGMYDIYSV------------------------------- 141 K +I++G+CA +GG+ + + Sbjct: 326 --HFRESCKIIIAVGSCAINGGVPSLRNNIDVKDCLDEAYLNGIGLVNPKVPIDKELPYL 383 Query: 142 ---VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 V + + I VD ++PGCPP +A+ + L L + Sbjct: 384 LEKVYPIHEVIKVDYFLPGCPPPADAFWKILNDLLD 419 >UniRef50_A5UWN9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=2 Tax=Roseiflexus RepID=A5UWN9_ROSS1 Length = 127 Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 14/115 (12%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEP 120 C +E++ + A A+P +AD++++ G T L ++ Sbjct: 12 CGGCDLEVIAALAAA------ADIDWAATPHEADVLLLTGPLTTDTKKAFMALLQELDHR 65 Query: 121 KWVISMGACANSGGMYDIYSVVQGVDKFIP---VDVYIPGCPPRPEAYMQALMLL 172 +I++G CA G + V IP V + + GCPP P ++A+ + Sbjct: 66 APIIAVGRCAIDGHPFGRGGVA-----VIPNLTVHLSLDGCPPTPTQIVEAIRTI 115 >UniRef50_D2BHA4 Nickel-dependent hydrogenase, group 3, small subunit n=5 Tax=Dehalococcoides RepID=D2BHA4_DEHSV Length = 312 Score = 72.0 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 56/165 (33%), Gaps = 55/165 (33%) Query: 61 LSCCYVEMVTSFTAVHD------------------VARFGAEVLRASPRQADLMVVAGTC 102 C + ++ + D + + G + P +ADL ++ G Sbjct: 12 CGGCELSILDIGEPLLDVLPNLKIVHMPVLMDHKLLGQKGDGIKYEIP-EADLGIITGGI 70 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSV--------------------- 141 + + + + K ++++G CA GG+ + ++ Sbjct: 71 RNEENREL--ALEMRKKCKLIVALGTCACFGGIPALANLSTTEDMLKQVFSKEKGTDPAS 128 Query: 142 -------------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 V VD+ I VD+++PGCPP P ++ L + Sbjct: 129 PPGDKSLPKMLDRVYAVDEIITVDIHLPGCPPTPAHIVELLTAVL 173 >UniRef50_Q21RP8 NADH ubiquinone oxidoreductase, 20 kDa subunit n=4 Tax=Proteobacteria RepID=Q21RP8_RHOFD Length = 188 Score = 71.6 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 46/157 (29%) Query: 59 FGLSCCYVEMVTSFTAVHDVARFGAEVLRASP----RQ---ADLMVVAGTCFTKMAPVIQ 111 G C++ + + D+ SP +Q D+ ++ G A +Q Sbjct: 21 AGCFGCHMSFLDIDERLFDLIEH--IEFDRSPLTDIKQVGACDIGLIEGGLCN--AENVQ 76 Query: 112 RLYDQMLEPKWVISMGACANSGG----------------MYDIY---------------- 139 L + K ++++GACA +GG +Y Sbjct: 77 VLREFRAHCKTLVAVGACAITGGLPAQRNHLDLGQLLTEVYRSRPGLSAGGAIPNDPELP 136 Query: 140 ---SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 + V + + + VD +PGCPP +A+ L L Sbjct: 137 LLLNKVHPIREVVHVDYSLPGCPPSADAFWHFLSDLM 173 >UniRef50_Q0W6J6 Coenzyme F420-non-reducing hydrogenase (Methyl viologen-reducing hydrogenase), gamma subunit n=2 Tax=Euryarchaeota RepID=Q0W6J6_UNCMA Length = 305 Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 64/188 (34%), Gaps = 46/188 (24%) Query: 60 GLSCCYVEMVTS---FTAVHDVARF---GAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 + C + ++ + + D F + +A + +V+G + L Sbjct: 13 ACAGCEISVLDTHEALLPILDKIEFVYIPVLMDTKHIPKATVGIVSGCVRNSD--NLHEL 70 Query: 114 YDQMLEPKWVISMGACANSG---GMYDIY------------------------------- 139 + ++++G+CA G GM ++Y Sbjct: 71 LEMRKNVDILVALGSCACFGGTPGMANLYTPEQLLEEVYVTTKSTKNEIQRHPYMDGLPT 130 Query: 140 --SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANM 197 + + ++ VD IPGC PRP QA++ L E + + V D+ + Sbjct: 131 LLPDAKPLSDYVKVDAMIPGCGPRPAMIAQAILSLLG--AAEYKLSTKSVCDECAREKSE 188 Query: 198 QSERERKR 205 ++ ++ R Sbjct: 189 RNLKKILR 196 >UniRef50_C6YT65 Predicted protein n=2 Tax=Francisella philomiragia RepID=C6YT65_9GAMM Length = 268 Score = 70.1 bits (170), Expect = 5e-11, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 39/174 (22%) Query: 43 NDMVNWGRKNSIWPYNFG-LSCCYVEMVT------SFTAVHDVARFGAEVLRASPRQADL 95 + + N + I + F C + ++ + + D+ F D+ Sbjct: 5 DKLKNLAPRPKIAVHKFSSCDGCQLALINDAVSLLTLAEMVDIVHFAEAGPLDEFADVDI 64 Query: 96 MVVAGTC-FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM--YDIY------------- 139 + G+ P +Q++ + + K+VI++GACA +GG+ Y Sbjct: 65 AFIEGSVNTHHDIPRLQKIRE---KAKYVIAIGACAVAGGIQALRNYTNAAELLEWQKAV 121 Query: 140 -------------SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 S + + +++ VD I GCP E ++A+ L + E+ Sbjct: 122 YPQDTDVIIKEDLSTAKAIKEYVNVDFEISGCPITTEQILKAIRQLLFGVEPEK 175 >UniRef50_A0LP54 NADH ubiquinone oxidoreductase, 20 kDa subunit n=7 Tax=Deltaproteobacteria RepID=A0LP54_SYNFM Length = 324 Score = 69.7 bits (169), Expect = 7e-11, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 57/209 (27%) Query: 61 LSCCYVEMVTSFTAVHDV------------------ARFGAEVLRASPRQADLMVVAGTC 102 + C + M+ ++ + G E P +AD+ +V+G Sbjct: 13 CAGCEISMLNMGGLFLELLKEIRIVHMPLLFDHKYFGQAGEENFIGIP-EADIGIVSGGI 71 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGM------------YDIYS-------VVQ 143 + ++ + + ++++G CA GG+ + Y Sbjct: 72 --RNEEQLEVALKVRAQCRILVALGTCATHGGIPALMNRYSDEDLFRRYYRTSETTEAAA 129 Query: 144 GVDKFIP--------------VDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGD 189 ++ +P VDVY+ GCPP P+ L + G+ + V D Sbjct: 130 PPNEVVPRFLDRTYALDEKARVDVYMAGCPPHPDYLGAMFRTLLD--GQWPEMPTKSVCD 187 Query: 190 QGVYRANMQ-SERERKRGERIAVTNLRTP 217 R + + ++ +R R A P Sbjct: 188 TCPTRREGKGNVQKIRRFTRSARFQNEKP 216 >UniRef50_Q50782 F420-non-reducing hydrogenase subunit G n=15 Tax=Euryarchaeota RepID=MVHG_METTH Length = 308 Score = 69.7 bits (169), Expect = 7e-11, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 61/184 (33%), Gaps = 51/184 (27%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAEVLRASP----------RQADLMVVAGTCFTKMAPV 109 G S C++ + + DV SP + D++++ G Sbjct: 14 GCSGCHLSIADFHEKIIDVMEH--ADFEFSPVLMDTKYDEIPELDVVIIEGGIVN--DEN 69 Query: 110 IQRLYDQMLEPKWVISMGACANSGGMYDIYSV---------------------------- 141 + + + K+VIS G CA GG+ + ++ Sbjct: 70 REFAEELREKAKFVISYGTCAVYGGIPGLRNLWDKDEVIEEAYINSITTPNEEGVIPSED 129 Query: 142 -------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 V+ + + I VD +PGCPPR + +A+M L G+E + + Sbjct: 130 VPHLEGRVKPLGEVIDVDFEVPGCPPRSDVAAEAVMALL--TGEEIELPETNLCEVCPRE 187 Query: 195 ANMQ 198 + Sbjct: 188 KPPE 191 >UniRef50_B9L8N0 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Nautilia profundicola AmH RepID=B9L8N0_NAUPA Length = 288 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 29/145 (20%) Query: 52 NSIWPYNFGLSCCYVEMVTS--FTAVHDVARFGAEVLRAS----PRQADLMVVAGTCFTK 105 N IW C + +++ + F L S +Q DL++V G Sbjct: 6 NVIWIDAVTCYGCTHSFLNYKEISSLFEKVNFEYHPLFLSNDLEIKQCDLLIVEGAL-KN 64 Query: 106 MAPVIQRLYDQML-----EPKWVISMGACANSGGMYDI-----------YSVVQGVDKFI 149 P + ++++ + K V+++G CA GGM+ Y + DK I Sbjct: 65 NYPRLGYSLNELISKLFFKAKKVLALGTCAVYGGMFGEGLMYNKEQKGHYYKCR--DKII 122 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQE 174 +PGCPP P+ L ++ E Sbjct: 123 ----NLPGCPPHPDWIAFVLDMISE 143 >UniRef50_C7NU23 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NU23_HALUD Length = 191 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 43/156 (27%) Query: 60 GLSCCYVEMVTS------FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 G S C++E + D+ V +AD+ + G + + Sbjct: 24 GCSGCHMEFLNVDHGLVDLVEEVDIVASHMIVDEKGVPEADVGIAEGVVTNEENVEVAEE 83 Query: 114 YDQMLEPKWVISMGACANSGGMY--DIYS------------------------------- 140 + + V++ G CA G+ Y Sbjct: 84 LRENCD--TVVAWGDCAALRGIMSLRNYQDRDEMLEETFMGEADDESEVPFGDDEGVPKL 141 Query: 141 --VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQE 174 + +D++I VDVY+PGCPP E ++L L Sbjct: 142 LEDARPLDEYIDVDVYVPGCPPDAEVMKESLEALAR 177 >UniRef50_Q59113 Hydrogenase small beta subunit n=2 Tax=Bacteria RepID=Q59113_9BACT Length = 179 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 42/154 (27%) Query: 60 GLSCCYVEMVTSFTAVHDVAR-----FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLY 114 + C++ + + D+ + F V D+ V++G ++ Sbjct: 13 ACAGCHMSFLDLDERLIDLFQNVEILFSPIVDAKDIPNIDVGVLSGGLGN--VEEVELAK 70 Query: 115 DQMLEPKWVISMGACANSGGM-----------------YDIYSVVQ-------------- 143 K++++ G CA GG+ + S V Sbjct: 71 KMRERCKYLVAWGDCAVFGGINCMRNFIPKDVVLREGYIETASTVNPQGIVPSEDIPELL 130 Query: 144 ----GVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 +D + VDVY+PGCPP + L Sbjct: 131 PRALPIDYEVKVDVYVPGCPPDADTIYYVFKELL 164 >UniRef50_Q58136 Uncharacterized protein MJ0726 n=3 Tax=Methanocaldococcus RepID=Y726_METJA Length = 216 Score = 68.5 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 18/120 (15%) Query: 91 RQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM----------YDIYS 140 ++ D+++V G ++++ + K +I++G+CA SGG + Sbjct: 23 KEKDIVLVGGAVNLDDEEEVKKIMEIRKNSKVLIAVGSCAVSGGFQRMLIGLENGFPQRF 82 Query: 141 VVQGVDKFIPVDVYIPGCPP---RPEAYMQALMLLQESIGKE---RRPLSWVVGDQGVYR 194 V G + VD I GCPP E ++A++ + I +P + G + Sbjct: 83 VRIG--DVVKVDYAIIGCPPDEEEVERIVKAVIEKDKEIVDSYLILKPYEVIAGKPIIDA 140 >UniRef50_Q2KJQ3 HoxY n=4 Tax=Proteobacteria RepID=Q2KJQ3_CHRVI Length = 180 Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 40/151 (26%) Query: 60 GLSCCYVEMVTSFTAVHDVARF------GAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 G S C++ + + ++ + P + D+ ++ G+ ++ RL Sbjct: 16 GCSGCHMSFLDLDERLIELVEHVEIVYSPLVDTKELPARVDVGILEGSISSEDDLEKARL 75 Query: 114 YDQMLEPKWVISMGACANSGG------------MYDIYSV-------------------- 141 + + ++S+G CA +G ++D Sbjct: 76 FRERCTR--LVSLGDCAVTGNVPAMRNHFKLADVFDRAYRENVTLQPQIPTRRVPALLTP 133 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLL 172 V+ V + VDV++PGCPP +A L L Sbjct: 134 VKPVHGEVKVDVFVPGCPPSADAIWHVLSEL 164 >UniRef50_C0QEJ1 HynB n=4 Tax=Deltaproteobacteria RepID=C0QEJ1_DESAH Length = 330 Score = 66.6 bits (161), Expect = 6e-10, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 42/208 (20%) Query: 36 NVFMGKLNDMVNWGRKNSIWPYNFG-LSCCYVEMVTS---FTAVHDVAR--FGAEVLRAS 89 + + R + +W +FG + C + + + + + ++ AS Sbjct: 58 GQVASSIEKAASGTRPSVVW-LHFGECTGCSEAFLRTPNVGAIILETISVEYHETIMAAS 116 Query: 90 PRQAD--------------LMVVAGTCFTKM---------APVIQRLYDQMLEPKWVISM 126 QA+ + VV G+ T ++ D + + I++ Sbjct: 117 GHQAEKSLEQAIKTHKGKFICVVEGSIATAYNGAYGKVGGRTFLEIANDVIPKAAVTIAL 176 Query: 127 GACANSGGMY---DIYSVVQGVDKFIPVD-VYIPGCPPRPEAYMQALMLLQESIGKERRP 182 G CA GG+ +GV I V + I GCPP P + ++ Sbjct: 177 GTCAAYGGIPSAAPNPGGYKGVKDAIGVATINISGCPPNPLNLLSTIVKYLNK------- 229 Query: 183 LSWVVGDQGVYRANMQSERERKRGERIA 210 + D+ +E R R+ Sbjct: 230 -ETIELDELGRPLFAYAETVHDRCPRLK 256 >UniRef50_B8ERX2 Hydrogen dehydrogenase n=1 Tax=Methylocella silvestris BL2 RepID=B8ERX2_METSB Length = 190 Score = 66.2 bits (160), Expect = 7e-10, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 54/155 (34%), Gaps = 43/155 (27%) Query: 60 GLSCCYVEMVTSFTA------VHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 G C++ ++ + D+ + ++ R D+ V G C ++ L Sbjct: 23 GCFGCHMSLLDIDERILELIDLVDLDVSPFDDKKSFDRPVDVGFVEGGCSN--EYNVKEL 80 Query: 114 YDQMLEPKWVISMGACANSGGMYDIYSVVQ------------------------------ 143 + + ++S+GACA +GG+ + + V Sbjct: 81 IEFRKHCRILVSVGACAINGGVPAMRNTVGLRECLEAVYLHGVSLEGGGMIPNDEDLPLL 140 Query: 144 -----GVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 + + +D ++PGCPP +A AL L Sbjct: 141 LDRVYPSHEVVKIDYFLPGCPPSGDAIWAALKALL 175 >UniRef50_Q0W2X8 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2X8_UNCMA Length = 232 Score = 65.8 bits (159), Expect = 9e-10, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 16/136 (11%) Query: 55 WPYNFGLSCCYVEMVTSFTAVHDV------ARFGAEVLRASPRQADLMVVAGTCFTKMAP 108 + + S C + + +F V D+ + DL+ V G + Sbjct: 8 YVHLAACSGCEISFLDNFERVLDMMDMVDIDYMTLIADATEIPKVDLLFVDGAACLQSKE 67 Query: 109 VIQRLYDQMLEPKWVISMGACANS--------GG--MYDIYSVVQGVDKFIPVDVYIPGC 158 ++ L ++++ G C+++ GG + + + + VD ++PG Sbjct: 68 SVESLKKARENTGFLVAWGGCSSTATINNFSRGGQSPQPQHESFPQISRLVKVDAFVPGS 127 Query: 159 PPRPEAYMQALMLLQE 174 PP PE + E Sbjct: 128 PPGPEMAYNVIRAFVE 143 >UniRef50_D2REQ3 NADH ubiquinone oxidoreductase 20 kDa subunit n=2 Tax=cellular organisms RepID=D2REQ3_ARCPR Length = 321 Score = 65.8 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 70/224 (31%), Gaps = 68/224 (30%) Query: 60 GLSCCYVEMVTSFTAVHD-VARFGAEVLRAS------------PRQA-DLMVVAGTCFTK 105 G C + +V + D + + P Q+ DL +++G K Sbjct: 12 GCGGCDMAVVDLSEKLVDALEHLEIVFWAPTVADVKYKDLEAMPDQSIDLGLISGMVRNK 71 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGM------------YDIYSV------------ 141 + ++ Q + K +++ G CA GG+ ++ + Sbjct: 72 ENEHLVKVMRQ--KCKIIVAFGICAALGGIPGMANMHKNEELFENAYIKSPSTDNPNNVI 129 Query: 142 --------------------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 V+ +D+ I VD Y+ GCPP + + + + G Sbjct: 130 PQPVSKEGEFELTLPEFLDRVKPIDEVIEVDYYVGGCPPHHDHVAKVVEAV--ITGNLPP 187 Query: 182 PLSWVVGDQGVYRANMQS------ERERKRGERIAVTNLRTPDE 219 SW+ + V ++ RE + + + +E Sbjct: 188 KGSWITNGKAVCDVCARNPAVKGKTREFVKEVKRMHEGIPDEEE 231 >UniRef50_B6YSK0 Sulfhydrogenase II, delta chain n=6 Tax=Thermococcaceae RepID=B6YSK0_THEON Length = 246 Score = 65.4 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 31/145 (21%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVLRASPR-------QADLMVVAGTCFTKMAPVIQRL 113 C + ++ + + D+ F E+ D+ +V GT ++ + + Sbjct: 15 CGGCALNILFLYEKLFDLLEF-YEITEFHMATSLSEGSHYDVALVTGTVSSQRDLALLK- 72 Query: 114 YDQMLEPKWVISMGACANSGGM----------------YDIYSVVQGVD-----KFIPVD 152 + ++I++G CA G + D + ++ +D +++ VD Sbjct: 73 -EARNHSDYLIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALDSKPVVEYVAVD 131 Query: 153 VYIPGCPPRPEAYMQALMLLQESIG 177 +PGCP Q LM + + I Sbjct: 132 FALPGCPYDKNEVYQVLMDIAKGIE 156 >UniRef50_A0LKF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKF2_SYNFM Length = 300 Score = 65.4 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 53/186 (28%) Query: 61 LSCCYVEMVTSFTAVHD-VARF-----------------GAEVLRASPRQADLMVVAGTC 102 + C V ++ + D + R G + + PR AD+ +V+G Sbjct: 14 CAGCEVAILDQGELLLDILERISIVHAPILMDSKYRDPAGDSDVVSIPR-ADVGIVSGGI 72 Query: 103 FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQG------------------ 144 + + +I+ G+CA GG+ + ++V Sbjct: 73 --RTEHGLAVAKAVRESCDILIANGSCACMGGIPSLANLVPPDVLKQGVPNLEHGVEDGD 130 Query: 145 ------------VDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGV 192 +++ +PVD+++PGCPP + AL + E G+ V ++ Sbjct: 131 FELPPLTARVAAINEVVPVDIFLPGCPPPTHLFAAALQAVLE--GRSFDLPEDTVCNECS 188 Query: 193 YRANMQ 198 + Sbjct: 189 KTKEKR 194 >UniRef50_C7MNR7 Hydrogenase (NiFe) small subunit HydA n=4 Tax=Coriobacteriaceae RepID=C7MNR7_CRYCD Length = 439 Score = 65.4 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 44/184 (23%) Query: 27 DPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCY-----VEMVTSFTAVHDVARF 81 + + K+V K + IW + C VE T V ++ Sbjct: 43 PQVADALEKSVIGAKEGKLY-----PVIWIEGASCTGCTEAFAQVETPDPATIVLEMISL 97 Query: 82 GAEV-----LRASPRQAD---------LMVVAGTCFTKM---------APVIQRLYDQML 118 S +A +++ G K P + L + Sbjct: 98 NYSETLSAAAGYSMEEAKEQTIEAGNYILIYEGAVLEKWGGEALRVAGKPGTEHLLEAAP 157 Query: 119 EPKWVISMGACANSGGMY---DIYSVVQGVDKF-------IPVDVYIPGCPPRPEAYMQA 168 V+++G+CA +GG + GV+KF +PV V IPGCP PE + Sbjct: 158 SANAVVALGSCAVNGGWMGANPNSAGAVGVEKFLKESGINVPV-VNIPGCPANPEWLVAV 216 Query: 169 LMLL 172 L+ + Sbjct: 217 LVDV 220 >UniRef50_C6A155 NiFe hydrogenase I, subunit delta n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A155_THESM Length = 267 Score = 65.1 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 30/141 (21%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVL----RASP--RQADLMVVAGTCFTKMAPVIQRLY 114 C ++ + + + E R S ++ D+ + G+ T+ ++ + Sbjct: 21 CYGCQLQFAMMDEVLQLLDKANIECWFMLERGSDEDKEVDIAFIEGSVSTQ--EEVELVK 78 Query: 115 DQMLEPKWVISMGACANSGGM----------------YDIYSV------VQGVDKFIPVD 152 + K VI++G+CA GG+ Y V + V+K+I VD Sbjct: 79 KIREKAKIVIAVGSCAVHGGVQSWDKDKEFNELWKTVYGDAHVKFEPKMAEPVEKYIKVD 138 Query: 153 VYIPGCPPRPEAYMQALMLLQ 173 + GCPP + ++ AL L Sbjct: 139 YKLYGCPPEKKDFLYALGTLL 159 >UniRef50_Q2LYD8 Nickel-dependent hydrogenase, small chain n=2 Tax=Bacteria RepID=Q2LYD8_SYNAS Length = 253 Score = 64.3 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 31/136 (22%) Query: 59 FGLSCCYVEMVTSFTAVHD-VARFGAEVLRASP-----RQADLMVVAGTCFTKMAPVIQR 112 C +++ A+ D + R + D+ +V G+ + A QR Sbjct: 16 ACCEGCQLQVANLGEALLDILGAIDVVEFREVMSEKWDKNYDVAIVEGSITDEHAE--QR 73 Query: 113 LYDQMLEPKWVISMGACANSGGM--YDIYSVV--------------------QGVDKFIP 150 + +I+ G+CA GG+ V+ + + + + Sbjct: 74 IRKIRDRSAVLIAYGSCATIGGVNGMKNSFVLDEIRQSVYGKDYQLFDSKKTRPIHQVVK 133 Query: 151 VDVYIPGCPP-RPEAY 165 VD +I GCP PE Sbjct: 134 VDYFINGCPVYHPEVI 149 >UniRef50_P13061 Periplasmic [NiFe] hydrogenase small subunit n=63 Tax=Proteobacteria RepID=PHNS_DESDA Length = 315 Score = 64.3 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 37/163 (22%) Query: 49 GRKNSIWPYNFG-LSCCYVEMVTSFTAVHDVARFGAEVLRASP----------------- 90 GR+ S+ + + C ++ ++ D L Sbjct: 53 GRRPSVVYLHAAECTGCSEALLRTYQPFIDTLILDTISLDYHETIMAAAGEAAEEALQAA 112 Query: 91 ---RQADLMVVAGTCFTKM-----APVIQRLYDQM----LEPKWVISMGACANSGGMY-- 136 + +V G T M +YD + K V+S+G CA GG+ Sbjct: 113 VNGPDGFICLVEGAIPTGMDNKYGYIAGHTMYDICKNILPKAKAVVSIGTCACYGGIQAA 172 Query: 137 -DIYSVVQGVDKFIP----VDVYIPGCPPRPEAYMQALMLLQE 174 + +G++ + +PGCPP P + L+ + Sbjct: 173 KPNPTAAKGINDCYADLGVKAINVPGCPPNPLNMVGTLVAFLK 215 >UniRef50_C1DUF2 Quinone-reactive Ni/Fe-hydrogenase small chain (Membrane-bound hydrogenase small subunit) (Hydrogen:quinoneoxidoreductase) n=3 Tax=Bacteria RepID=C1DUF2_SULAA Length = 416 Score = 63.9 bits (154), Expect = 3e-09, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 17/92 (18%) Query: 95 LMVVAGTCFTKMAPV----------IQRLYDQMLEPKWVISMGACANSGGM---YDIYSV 141 L+ V G+ KM +QR+ + K VI++GACA+ GG+ Y + Sbjct: 166 LLFVEGSIPVKMEYAFTTGRHPETGVQRVRRLAKDAKAVIAVGACASFGGVPAAYPNPTG 225 Query: 142 VQGVDKF---IPVDVYIPGCPPRPEAYMQALM 170 GV +PV V IP CP P + +M Sbjct: 226 AVGVMDVVSGVPV-VNIPACPANPVNIVGVIM 256 >UniRef50_D1Z1F3 Coenzyme F420 hydrogenase subunit gamma n=1 Tax=Methanocella paludicola SANAE RepID=D1Z1F3_METPS Length = 235 Score = 63.9 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 16/136 (11%) Query: 55 WPYNFGLSCCYVEMVTSFTAVHDV-ARFGAEVLR-----ASPRQADLMVVAGTCFTKMAP 108 + + S C + + +F + D+ E + + D++ V G + Sbjct: 8 YVHLAACSGCEISFLDNFERLLDMMDMVDIEYMTLIKDATDIPKVDIVFVDGAACLQSED 67 Query: 109 VIQRLYDQMLEPKWVISMGACANS--------GG--MYDIYSVVQGVDKFIPVDVYIPGC 158 ++ L ++++ G C+++ GG + + + + VD +PG Sbjct: 68 AVETLKKARENATYLVAWGGCSSTATINNFSRGGQLPQPQHESFPPIKRLVKVDASVPGS 127 Query: 159 PPRPEAYMQALMLLQE 174 PP P + E Sbjct: 128 PPGPGMAYNVIRAFVE 143 >UniRef50_Q6ARY6 Related to periplasmic [NiFeSe] hydrogenase, small subunit [Precursor] n=1 Tax=Desulfotalea psychrophila RepID=Q6ARY6_DESPS Length = 300 Score = 63.9 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 36/160 (22%) Query: 49 GRKNSIWPYNFGLSCCYVEMVTSFTA-------VHDVARFG-----------AEVLRASP 90 GR +W S C + M+ S + + F ++R S Sbjct: 40 GRSKVLWLQAQSCSGCSISMLDSESPGPAELLTQYISLLFHHTLSAATGESCMHIVRKSV 99 Query: 91 RQAD-LMVVAGTCFTKMAPVIQR--------LYDQMLEPKWVISMGACANSGGMY---DI 138 +Q ++VV G+ M + +VI++G CA GG+ Sbjct: 100 QQGGYILVVEGSIPAGMPEACMMGGIPVGELIKQAAERADYVIALGTCAAFGGIPAAEGN 159 Query: 139 YSVVQGVDKFIPVD------VYIPGCPPRPEAYMQALMLL 172 + + F+ + + IPGCP P+ + L+ L Sbjct: 160 PTGAVPLGPFLQANKIKTPIINIPGCPSHPDWLVGTLVHL 199 >UniRef50_C7J5D7 Os07g0116900 protein n=3 Tax=Oryza sativa RepID=C7J5D7_ORYSJ Length = 114 Score = 63.5 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 64 CYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 C VEM+ + + +D RF + R SPRQ+D M++ GT KM P + + Sbjct: 61 CAVEMMHAGASCYDFDRFRV-IFRPSPRQSDCMIIVGTLTNKMGPALGKT 109 >UniRef50_C1DUT4 Putative [NiFe] hydrogenase, delta subunit n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DUT4_SULAA Length = 249 Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 31/165 (18%) Query: 61 LSCCYVEMVTSFTAVHDVARFGAEVL-----RASPRQADLMVVAGTCFTKMAPVIQRLYD 115 C + + + ++ F + + D V G+ T I+R+ D Sbjct: 11 CDGCQLSFINLSGELAELENFSIDYFLEGQSVNNYEYFDFSFVEGSVST--TEEIERIKD 68 Query: 116 QMLEPKWVISMGACANSGGM-----YDI-------YSVVQ----------GVDKFIPVDV 153 K ++ +GACA SGG+ + Y+ V + + + VD Sbjct: 69 IRERSKVLVGIGACAVSGGVQSIRNFRNIDDIKTVYNTVDITKNVLENALPISQVVKVDF 128 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 I GCP + + + IGK ++ V + R N+ Sbjct: 129 EIRGCPVSTDVVKDFINSIL--IGKSPHNYNYPVCLECKRRGNIC 171 >UniRef50_B1L5Y5 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L5Y5_KORCO Length = 319 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 51/173 (29%), Gaps = 59/173 (34%) Query: 58 NFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQ-------------ADLMVVAGTCFT 104 C V + D+ VL D+ ++ G T Sbjct: 11 CASCGGCEEAQVDLADKLFDLIEAADIVLWPVAMDFKKEDVEKVGDGSIDVAIINGGIRT 70 Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGM----------------YDIYSVVQ----- 143 + +L + + K VI+ G+CA+ GG+ Y+ V Sbjct: 71 SEHEEMVKLLRR--KSKLVIAYGSCAHMGGIPALANAYTRESILKYVYEEAPTVTNPEGK 128 Query: 144 -----------------------GVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 +D I VD YIPGCPP PE +A+ + Sbjct: 129 RPKTRVSVDGMDFELPEFLEYLDPLDAVIDVDYYIPGCPPTPEITWEAVSSIL 181 >UniRef50_C3XGH6 Ni/Fe-hydrogenase small subunit n=8 Tax=Proteobacteria RepID=C3XGH6_9HELI Length = 425 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 48/157 (30%), Gaps = 35/157 (22%) Query: 50 RKNSIWPYNFGLSCCYVEMVTSFTAVHDVA-------RFGAEVLRASPRQAD-------- 94 R IW + + C ++ S D + ++ AS QA+ Sbjct: 119 RVPIIWLHMAECTGCSESLLRSEDPCIDSIIFDYVSMEYHETIMAASGYQAEKSLEDAVK 178 Query: 95 ------LMVVAGTCFTKMAPVIQ----------RLYDQMLEPKWVISMGACANSGGMY-- 136 +M+V G + + ++G C++ GG+ Sbjct: 179 KYDGRYVMMVEGGIPKDTEYFLTIGASGRTGAEECRHVAKHAAAIFAIGTCSSFGGVQAA 238 Query: 137 -DIYSVVQGVDKFIPVDV-YIPGCPPRPEAYMQALML 171 + + I V +PGCPP + + LM Sbjct: 239 APNPTNAHPLSDIIDKKVINVPGCPPNEKNIVGTLMQ 275 >UniRef50_Q3ABV6 [Ni/Fe] hydrogenase, small subunit n=3 Tax=Clostridia RepID=Q3ABV6_CARHZ Length = 354 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 54/165 (32%), Gaps = 40/165 (24%) Query: 49 GRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL------------- 95 G+ IW + C V ++ S L+ P + Sbjct: 39 GQPPVIWIQGASCTGCSVSLLNSVHPDIKEILLEIINLKFHPNISAATGHVAVEAFLGEA 98 Query: 96 --------MVVAGTCFTKM--------APVIQRLY------DQMLEPKWVISMGACANSG 133 +VV G TK + LY + + K VI++G CA G Sbjct: 99 EKNKGKFFLVVEGAVPTKDNGVYCSIGEKDGRELYFSEVVKELGEKAKAVIAIGTCAAFG 158 Query: 134 GMY---DIYSVVQGVDKFI--PVDVYIPGCPPRPEAYMQALMLLQ 173 G+ + V + I + IPGCPP P+ ++ +L + Sbjct: 159 GIPAADPNPTGCVPVTEVIDPKKVLNIPGCPPHPDWFVGSLAHVL 203 >UniRef50_B1I576 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I576_DESAP Length = 317 Score = 60.8 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 49/174 (28%), Gaps = 61/174 (35%) Query: 53 SIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP---RQADL----------MVVA 99 S W C V ++ + DVA V + AD+ + Sbjct: 8 SYWA--AACGGCDVAILDIHEKIVDVAAVADIVFWPIAVDFKYADVEGYEDGFIDVCLFH 65 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI--------------------- 138 G + +L + K +++ G+CA SGG+ + Sbjct: 66 GAIRNSEGEHVAKLL--RKKSKVMVAFGSCAISGGIPGLANFKQKNDIFYRVYIESQSTQ 123 Query: 139 -----------------------YSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 Y V+ + + VD ++PGCPP + Sbjct: 124 NPEKVYPQTHYAVPEGVLELPEFYKEVKSLSDVVDVDYFMPGCPPTSAQIWAVI 177 >UniRef50_C8S807 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S807_FERPL Length = 299 Score = 60.4 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 50/158 (31%) Query: 60 GLSCCYVEMVTSFTAVHDVARFGAE---VLRASP-------RQADLMVVAGTCFTKMAPV 109 G S C + RF + S + DL + G+ Sbjct: 13 GCSGCILSFFDLEEFFLSSERFSVVWAPMFTNSKLEDLEKIERIDLTFIEGSIRLSEHEE 72 Query: 110 IQRLYDQMLEPKWVISMGACANSGGMYDIYS----------------------------- 140 I ++ + + V+++G CA GG+ + + Sbjct: 73 IVKIL--REKSEKVVALGTCAVFGGVPGLSNFYSDEEILSDVFDSDENAPKPRTLLDGKY 130 Query: 141 ---------VVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 ++ V++ I VD ++PGCPP ++ + Sbjct: 131 ELTLPEFKDEMKRVEEVIEVDHFVPGCPPSKNQLLKII 168 >UniRef50_B5YFX1 F420-non-reducing hydrogenase subunit G n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YFX1_THEYD Length = 318 Score = 60.4 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 63/204 (30%), Gaps = 64/204 (31%) Query: 55 WPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADL---------------MVVA 99 + G C + +V + DVA +++ +P AD+ + Sbjct: 8 YYLAGGCGGCDIAVVDISEMLVDVA-LAVDIVFWAPTVADVKYKDLEAMPDGSIDVGLFT 66 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVV----------------- 142 G I ++ + K +I+ G CA GG+ + ++ Sbjct: 67 GNVRNSEHEHIAKVLRN--KCKVLIAFGICAACGGIKGLVNLHTTDELLDKAYVNTFSTD 124 Query: 143 ---------------------------QGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 + +D+ + VD YI GCPP E A L Sbjct: 125 NPNKELPQTTCVVDGKYELTLPTLMYARPLDEVVKVDYYIGGCPPHYEHVKAAFTALLS- 183 Query: 176 IGKERRPLSWVVGDQGVYRANMQS 199 G+ P SW+ + V ++ Sbjct: 184 -GQLPPPGSWITMGKAVCEVCDRN 206 >UniRef50_A9B2V8 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B2V8_HERA2 Length = 124 Score = 60.4 bits (145), Expect = 5e-08, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 14/126 (11%) Query: 53 SIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEV-LRASPRQADLMVVAGTCFTKMAPVIQ 111 +++ N G + V ++ + R + A+P AD+ V+ G + P + Sbjct: 3 AVYHLNAGSTGIEVRILA------EAIRSARNLTWAATPAHADIFVLTGPIPLLLRPALS 56 Query: 112 RLY-DQMLEPKWVISMGACANSGGMYDIYSVVQGVDKF--IPVDVYIPGCPPRPEAYMQA 168 ++ D + + +I++G + G + G+ + I V I G PP A Sbjct: 57 NVWRDFIADRAPLIALGRASIDGHPFG----RGGLAELPEIQVAAKIDGDPPTVAAIQAG 112 Query: 169 LMLLQE 174 ++ Sbjct: 113 IVQALN 118 >UniRef50_Q85WY3 ORF82a n=1 Tax=Pinus koraiensis RepID=Q85WY3_PINKO Length = 82 Score = 60.1 bits (144), Expect = 6e-08, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 8/55 (14%) Query: 129 CANSGGMY--------DIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 C+ G MY D YS V VDK IPVDVY P CP PE + A+ L+E Sbjct: 21 CSCPGSMYYHIEMFGTDSYSTVHEVDKLIPVDVYSPDCPTEPEVIIDAITKLRER 75 >UniRef50_Q24VQ2 Ni,Fe-hydrogenase small subunit n=2 Tax=Desulfitobacterium hafniense RepID=Q24VQ2_DESHY Length = 319 Score = 59.7 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 32/159 (20%) Query: 46 VNWGRKNSIWPYNFGLSCCYVEMVTSFTAV-----HDV--ARFGAEVLRASPRQA----- 93 N +K IW G + C +++S D+ R+ ++ AS QA Sbjct: 55 ANLSKKPVIWMQGQGCTGCSESLLSSVDPGPEEIILDLLSVRYHPTLMAASGEQAVQSLE 114 Query: 94 D-------LMVVAGTCFTKM--------APVIQRLYDQMLEPKWVISMGACANSGGM--- 135 D ++V+ G+ T P I++ + + VI++G+CA GG+ Sbjct: 115 DCIAQGHYILVLEGSIPTADSRYCFVEGKPFIEQFKLAAEKAEAVIAVGSCACYGGIPRA 174 Query: 136 -YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 + + Q V + + V V +P CP +P+ + L+ Sbjct: 175 GFTGAAGAQEVLEGVKV-VNLPSCPVKPDRLVGLLLYYL 212 >UniRef50_C9R9W3 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Ammonifex degensii KC4 RepID=C9R9W3_AMMDK Length = 319 Score = 59.7 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 58/223 (26%), Gaps = 61/223 (27%) Query: 53 SIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVL------------RASPRQA-DLMVVA 99 S W + C V ++ + D+ + V A P D+ Sbjct: 9 SYWAAD--CGGCDVAILDTHEKFLDIVQAADIVFMPIAVDIKEKDVEAFPDGYIDVCFFH 66 Query: 100 GTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-----------------YDIYSVV 142 G + +L + + K +++ G+CA GG+ ++ S Sbjct: 67 GAIRNSENEHMAKLLRR--KSKVLVAFGSCAMMGGVPGLANFKDREGILSRVYFESPSTD 124 Query: 143 QG---------------------------VDKFIPVDVYIPGCPPRPEAYMQALMLLQES 175 + + VD ++PGCPP + + Sbjct: 125 NPDKVLPQTETQVREGVLTLPAFYEEVKTLADVVDVDYFMPGCPPASHQIVNVFQAIVAG 184 Query: 176 IGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD 218 + + + E + + + P+ Sbjct: 185 NLPPKGSIVGASTKSVCEECSRIKENKTIKRFYRVHEIIPDPE 227 >UniRef50_B4SFA2 NADH ubiquinone oxidoreductase 20 kDa subunit n=10 Tax=Chlorobiaceae RepID=B4SFA2_PELPB Length = 258 Score = 59.7 bits (143), Expect = 8e-08, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 27/125 (21%) Query: 60 GLSCCYVEMVTSFTAVHD-VARFGAEVLRA-SPRQ---ADLMVVAGTCFTKMAPVIQRLY 114 C +++ + + D + R S Q D+ ++ G+ + ++RL Sbjct: 24 CCEGCQLQLANRESTLADFLNLLDIRNFRELSSEQHDDYDIALIEGSISRQDE--VERLL 81 Query: 115 DQMLEPKWVISMGACANSGGM----------------YDIYSV----VQGVDKFIPVDVY 154 + K +++ G CA GG+ Y + V+ + + VD+ Sbjct: 82 KIRQQAKILVAFGTCACFGGINSLKNRFPAREMIDAVYPGMPIETLPVRKISDVVKVDLS 141 Query: 155 IPGCP 159 IPGCP Sbjct: 142 IPGCP 146 >UniRef50_B9KFD7 Quinone-reactive Ni/Fe-hydrogenase, small subunit n=2 Tax=Campylobacter RepID=B9KFD7_CAMLR Length = 544 Score = 59.3 bits (142), Expect = 9e-08, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 39/152 (25%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVH-DVA------RFGAEVLRASPRQA-----------DL 95 IW + + C ++ + D+ + + AS QA D Sbjct: 64 IWLHLSECTGCSESLLRTSLPDFLDLIFDFISLEYHETFMSASGHQAESHLEEVLEKKDF 123 Query: 96 MV-VAGTCF-------------TKMAPVIQRLYDQMLEPKWVISMGACANSGGM---YDI 138 ++ V G ++Q+ K + +MG C++ GG+ + Sbjct: 124 LLAVEGGVCAIDPFYLTIGAHGENGYEILQKC---AKNAKTIFAMGTCSSFGGIQAAHPN 180 Query: 139 YSVVQGVDKFIPVDV-YIPGCPPRPEAYMQAL 169 + G+ K + V IPGCPP + AL Sbjct: 181 PTKSIGISKVLEEKVINIPGCPPSDANIIAAL 212 >UniRef50_Q06173 Periplasmic [NiFe] hydrogenase small subunit 1 n=17 Tax=Bacteria RepID=PHNS1_DESVH Length = 317 Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 36/187 (19%) Query: 24 IVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGA 83 + + + R + ++ +N + C ++ +F D Sbjct: 30 CTAIAVTMGMGPAFAPEVARALTGSRRPSVVYLHNAECTGCSESVLRAFQPYLDELILDT 89 Query: 84 EVLRAS--------------PRQA----D--LMVVAGTCFTKM---------APVIQRLY 114 L QA D + +V G T ++ Sbjct: 90 ISLDYHETIMAAAGDAAEAALHQAVANPDGFICIVEGAIPTADNGIYGKVANHTMLSICS 149 Query: 115 DQMLEPKWVISMGACANSGGMY---DIYSVVQGVDKFIP---VD-VYIPGCPPRPEAYMQ 167 D + + K VI+ G CA GG+ + +G++ + V+ + + GCPP P + Sbjct: 150 DIVPKAKAVIAYGTCATFGGVQAAKPNPTGAKGLNDALKHLGVNAINLAGCPPNPYNLVG 209 Query: 168 ALMLLQE 174 L+ + Sbjct: 210 TLVYYLK 216 >UniRef50_C7NPL1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Halorhabdus utahensis DSM 12940 RepID=C7NPL1_HALUD Length = 266 Score = 58.1 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 28/145 (19%) Query: 84 EVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM-------- 135 E + + ++ V G T +RL D V+++G+CA GG+ Sbjct: 45 EAMTEHSDEYEIAFVEGGVATAHDE--RRLTDIRDNADVVVALGSCAAFGGINALRNHQD 102 Query: 136 YD---------------IYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKER 180 ++ Y + + ++ I V+ IPGCP E ++ A+ L G E Sbjct: 103 FETVKERVYGEDADSITSYPIARPIEDVIEVEYEIPGCPIDREEFLGAVTALVN--GAEP 160 Query: 181 RPLSWVVGDQGVYRANMQS-ERERK 204 ++ V + + N + ER Sbjct: 161 SIPNYPVCLECKFAENTCAFERGET 185 >UniRef50_B6YU80 Cytosolic NiFe-hydrogenase, delta subunit n=9 Tax=Thermococcaceae RepID=B6YU80_THEON Length = 265 Score = 58.1 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 24/103 (23%) Query: 93 ADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM----------------Y 136 D+ + G+ T ++ + K V+++GACA GG+ Y Sbjct: 53 VDIAFIEGSVST--EEEVELVKKIRENAKIVVAVGACATQGGVQSWEKDKSLEELWKAVY 110 Query: 137 DIYSV------VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQ 173 V + ++ +I VD I GCPP + ++ A+ Sbjct: 111 GDGKVKFEPKMAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFL 153 >UniRef50_C3XE47 Quinone-reactive Ni/Fe hydrogenase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XE47_9HELI Length = 593 Score = 57.0 bits (136), Expect = 4e-07, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 54/150 (36%), Gaps = 32/150 (21%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRAS--------------PRQAD----- 94 +W + + C ++ + T +V F + A+ Sbjct: 68 VWLHLQECTGCSESLLRTETPSFEVLLFDIFKIVYHDLVMVSSGHGAVAALEHANSHEKY 127 Query: 95 LMVVAGTCFTKMAPVIQRL-----YDQML----EPKWVISMGACANSGGM---YDIYSVV 142 +++V G+ A L YD++ + V ++G C++ GG+ Y + Sbjct: 128 VLLVEGSIPMGFAKDYITLGDRNGYDEISHLIHNAEAVFAIGTCSSFGGIQSAYPNPTNG 187 Query: 143 QGVDKFIPVDV-YIPGCPPRPEAYMQALML 171 + + ++ +PGCPP + + L+ Sbjct: 188 HALSEIFEREIINVPGCPPSDKNIVATLLY 217 >UniRef50_D2BG44 Ni/Fe hydrogenase, small subunit n=5 Tax=Dehalococcoides RepID=D2BG44_DEHSV Length = 354 Score = 57.0 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 54/171 (31%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVH---------------------------DVARFGAEVL 86 IW G + C + + + D+A Sbjct: 46 IWLQGAGCNGCTISTINVVSPTIQDLLLTSVVPGTHVSMQYHPTIMAAQGDLAMSTITDT 105 Query: 87 RASPRQADLMVVAGTCFTKMA--------------PVIQRLYDQMLEPKWVISMGACANS 132 A ++V+ G+ K +++ + + + V++ G C+ Sbjct: 106 AAKGPF--VLVIEGSVPLKDDGVYAEIGEKDGEGITMLEHVLNLAPKALAVVAAGTCSAF 163 Query: 133 GGMY---DIYSVVQGVDKFI-------PVDVYIPGCPPRPEAYMQALMLLQ 173 GG+ + + V + + PV V +PGCPP P+ + L + Sbjct: 164 GGITASAPNPTGAKAVSEILKEHNITTPV-VNLPGCPPHPDWVVGTLATVL 213 >UniRef50_B5EBV9 NADH ubiquinone oxidoreductase 20 kDa subunit n=5 Tax=Geobacter RepID=B5EBV9_GEOBB Length = 251 Score = 57.0 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 53/174 (30%), Gaps = 33/174 (18%) Query: 60 GLSCCYVEMVTS------FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRL 113 S C + ++ A D+ F D +V G T + L Sbjct: 13 ACSGCQLTLLNCEDELAQVAARFDLVSFPMAESVEGGAPFDAAIVEGAVSTPGD--LANL 70 Query: 114 YDQMLEPKWVISMGACANSGGMYD-----------------------IYSVVQGVDKFIP 150 + + ++++G CA GG+ + F+ Sbjct: 71 FRLRNSSRLLVALGTCAIFGGVAAMNNGVSTREELVAAVYGDGEKTVESFAPAPLTNFVS 130 Query: 151 VDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERK 204 VD I GCPP + M L L G ++ V + R N+ ERK Sbjct: 131 VDFSITGCPPEKQEVMALLCALLN--GTLPPLATYPVCTECRSRENLCLLLERK 182 >UniRef50_Q2IH66 Methyl-viologen-reducing hydrogenase, delta subunit n=4 Tax=Anaeromyxobacter RepID=Q2IH66_ANADE Length = 491 Score = 56.6 bits (135), Expect = 6e-07, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 50/171 (29%), Gaps = 48/171 (28%) Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQG--------- 144 DL V G RL + + + V++ GACA+ GG+ + ++ + Sbjct: 225 DLAFVNGAVRLDEQEEWARLLRR--KARTVVAFGACAHLGGVVGLGNLSEPEALLEAAYR 282 Query: 145 -----------------------------------VDKFIPVDVYIPGCPPRPEAYMQAL 169 + + VD IPGCPP P AL Sbjct: 283 APPSVSNPEAPLPGGPVRADGATLSLPVLLPRTLTLADVVSVDYTIPGCPPSPAVVQAAL 342 Query: 170 MLLQESI--GKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD 218 L + V + R + ER R T+ P+ Sbjct: 343 DALLGDAPPPRGAVLAPDVSLCEDCPRKGSRPERIELHALRRLATSAVDPE 393 >UniRef50_B8FWY3 Hydrogenase (NiFe) small subunit HydA n=2 Tax=Desulfitobacterium hafniense RepID=B8FWY3_DESHD Length = 375 Score = 56.6 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 110 IQRLYDQMLEPKWVISMGACANSGGM---YDIYSVVQGVDKFIP--VDVYIPGCPPRPEA 164 + + L+ K+V+++G CA GG Y + GV +P + + GCP P+ Sbjct: 134 LDLVRRLGLKAKYVVAVGHCATYGGPVAGYPNPTQSTGVQNILPERRVINVSGCPAHPDW 193 Query: 165 YMQALMLL 172 M L+ L Sbjct: 194 IMGTLLHL 201 >UniRef50_A8UU12 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UU12_9AQUI Length = 252 Score = 56.2 bits (134), Expect = 8e-07, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 28/140 (20%) Query: 61 LSCCYVEMVTS--FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQML 118 C + D + D+ V G+ T+ + + + Sbjct: 15 CDGCQAIFLDLPSLWEHLDFRYWFLGKSENKLEPIDIAFVEGSVSTQ--EEAEFIKEVRE 72 Query: 119 EPKWVISMGACANSGGM-----YDI-------YSVVQ---------GVDKFIPVDVYIPG 157 + + ++++GACA SGG+ + Y + + + + VD I G Sbjct: 73 KARLLVTIGACATSGGIQALRNFGSLEEFSSVYPKPEFIKVLKRSTPISEHVKVDYEIYG 132 Query: 158 CPPRP---EAYMQALMLLQE 174 CP P E +++AL+ + Sbjct: 133 CPINPHILENFVKALLHSRR 152 >UniRef50_D1U6F3 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6F3_9DELT Length = 328 Score = 55.8 bits (133), Expect = 9e-07, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 39/165 (23%) Query: 50 RKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQAD--------------- 94 R + +W +N + C ++ + D L Sbjct: 56 RPDVVWLHNAECTGCSESILRTVEPYIDALILDYISLNYHETLMAAAGHAAEKALWDTVA 115 Query: 95 ----LMVVAGTCFTKMA---------------PVIQRLYDQMLEPKWVISMGACANSGGM 135 + V+ G T A +++ + + I+ G CA+ GG+ Sbjct: 116 AGKYVAVIEGGVPTAPAGTANEPGGHGKVGGHTMLENTTKVVEKALATITYGTCASYGGV 175 Query: 136 Y---DIYSVVQGVDKFIP--VDVYIPGCPPRPEAYMQALMLLQES 175 + +GVD+ P + +PGCPP P + + ++ Sbjct: 176 QKAAPNPTACKGVDELFPGKPIINVPGCPPNPYSLVGTIVYYVTK 220 >UniRef50_B1L3Q1 Coenzyme F420-reducing hydrogenase, gamma subunit n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3Q1_KORCO Length = 258 Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 36/182 (19%) Query: 54 IWPYNFGLSCCYVEMVTSFT---------AVHDVARFGAEVLRASPRQADLMVVAGTC-F 103 + + L+ C E +T ++ D+A F + + D+ V G+ Sbjct: 4 LRAAFYSLTGCQGEYLTILGMEDILLDLLSLVDIAEFKLASSKEYDGKVDIAFVEGSVST 63 Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGM-----------------------YDIYS 140 + I+R+ K ++++G CA GG+ Y Sbjct: 64 ERDLEYIKRIRG---NSKILVALGDCAVWGGIQASTSGQDPKELMRSVYKTEKNLYGFLG 120 Query: 141 VVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 +G+ + +PVD I GCP + + + L+ L + E + + + E Sbjct: 121 EHKGISEVVPVDYEIQGCPIEGKEFARVLIDLVRDVKPELPDYPVCIECKVREIPCLIVE 180 Query: 201 RE 202 R Sbjct: 181 RG 182 >UniRef50_B5IEA4 NADH ubiquinone oxidoreductase, 20 Kd subunit family n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IEA4_9EURY Length = 248 Score = 55.4 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 29/168 (17%) Query: 60 GLSCCYVEMVTSFTAVHDVARF-GAEVLRASPRQ----ADLMVVAGTCFTKMAPVIQRLY 114 C V+ + + ++ ++ G R + ++ V GT + I +L Sbjct: 10 CCEGCSVQFLNLENEILEILKYMGINNFRLAKEINEWPVEIAFVEGTPTNRDE--IIKLL 67 Query: 115 DQMLEPKWVISMGACANSGGM------------YDIYSVVQG--------VDKFIPVDVY 154 K ++++G CA +GG+ IY+ V + ++ VD Sbjct: 68 KIRKYSKILVALGTCAATGGVPAIVNTLEKKEAMKIYNGVPPKIPIDAKQLKYYVDVDYI 127 Query: 155 IPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERE 202 + GCP E + + + +GK R + V + R N E Sbjct: 128 LYGCPFSKEELKELITSVL--LGKGFRNKRYSVCVECTLRENGCLLEE 173 >UniRef50_B1ZXG1 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZXG1_OPITP Length = 334 Score = 55.4 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 67/219 (30%), Gaps = 66/219 (30%) Query: 58 NFGLSCCY-------------VEMVTSFTAVHDVARFGAEVLRASPRQ-ADLMVVAGTCF 103 C +E V + F + + A P Q + G Sbjct: 11 CAACGGCEEAIVDFAEDILGVIEAVDIVFWPVAMD-FKKKDVDALPDQGITATFLNGAIR 69 Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIY------------------------ 139 T + +L + + +++I+ GACA+ GG+ + Sbjct: 70 TSEQEEMAQLLRR--KSQFLIAYGACAHLGGIPGLANQFDREQLLSYVYEQTPTIDNPTH 127 Query: 140 --------------------SVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKE 179 V+ +D+ + VD YIPGCPP P+ A+ L E Sbjct: 128 VRPQPAHQNNGHSLTLPEFRHTVRSLDQVVAVDYYIPGCPPTPKITKAAITALLE----G 183 Query: 180 RRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD 218 + P V V N + + K ++ T + P Sbjct: 184 KLPPRGSVLAPDVALCNECARKPSKPAT-LSFTEFKRPH 221 >UniRef50_P13063 Periplasmic [NiFeSe] hydrogenase small subunit n=10 Tax=Deltaproteobacteria RepID=PHSS_DESBA Length = 315 Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 49/167 (29%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASP------------RQADL------ 95 IW G + C V ++ + L P ++ Sbjct: 43 IWVQGQGCTGCSVSLLNAVHPRIKEILLDVISLEFHPTVMASEGEMALAHMYEIAEKFNG 102 Query: 96 ---MVVAGTCF-------------------TKMAPVIQRLYDQMLEPKWVISMGACANSG 133 ++V G +++ + D + +++G C+ G Sbjct: 103 NFFLLVEGAIPTAKEGRYCIVGETLDAKGHHHEVTMMELIRDLAPKSLATVAVGTCSAYG 162 Query: 134 GMYDIYSVVQGV---------DKFIPVDVYIPGCPPRPEAYMQALML 171 G+ V G +K + V +PGCPP P+ + L+ Sbjct: 163 GIPAAEGNVTGSKSVRDFFADEKIEKLLVNVPGCPPHPDWMVGTLVA 209 >UniRef50_O33405 Uptake hydrogenase small subunit n=221 Tax=Bacteria RepID=MBHS_OLICO Length = 360 Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 38/191 (19%) Query: 50 RKNSIWPYNFGLSCCYVEMVTSFTAV------------HDVARFGAEVLRASPRQAD--- 94 R +W + +CC + S + +D A +A AD Sbjct: 51 RTPVLWLHGLECTCCSESFIRSAHPLVKDVVLSMISLDYDDTLMAAAGHQAEAALADTIE 110 Query: 95 ------LMVVAGTCFTKMA---------PVIQRLYDQMLEPKWVISMGACANSGGMY--- 136 ++ V G P + +L K +IS G+CA+ G + Sbjct: 111 RYKGNYILAVEGNPPLNEDGMFCIIGGKPFVDQLRYAAKHAKAIISWGSCASHGCVQAAR 170 Query: 137 DIYSVVQGVDKFI--PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYR 194 + V + I + +PGCPP E + + + P G ++ Sbjct: 171 PNPTRATPVHQVITDKPIIKVPGCPPIAEVMTGVITYML---TFGKLPELDRTGRPKMFY 227 Query: 195 ANMQSERERKR 205 + ++ +R Sbjct: 228 SQRIHDKCYRR 238 >UniRef50_C5S9B0 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S9B0_CHRVI Length = 251 Score = 53.5 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 55/152 (36%), Gaps = 35/152 (23%) Query: 61 LSCCYVEMVTSFTAVHDV-ARFGAEVLRASP--RQAD--LMVVAGTCFTKMAPVIQRLYD 115 C + ++ + ++ R + R D + + G+C ++ + Sbjct: 13 CEGCQLTVLDTLQRHPELLEVIEIVQFREAMSERGEDYQIAFIEGSCTRPSDEA--KIRE 70 Query: 116 QMLEPKWVISMGACANSGGM-----------------------YDIYSVVQGVDKFIPVD 152 + + V+++GACA+ GG+ ++ Y + + I VD Sbjct: 71 IREQAQIVVALGACAHLGGINAIRNRMPLEQTREYVYGDKKDWFETYP-ARPLSAVIEVD 129 Query: 153 VYIPGCPPRPEAYMQALMLLQESIGKERRPLS 184 IPGCP + + A+ L + R+P Sbjct: 130 AVIPGCPIDRKEFATAVTHLL----QGRKPAI 157 >UniRef50_Q7VJP5 Putative uncharacterized protein n=3 Tax=Helicobacter RepID=Q7VJP5_HELHP Length = 552 Score = 53.5 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 41/202 (20%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLR------------ASPRQA-----D-- 94 +W + + C + D+ E + S +++ D Sbjct: 63 VWLHLAECTGCSSSFLRLDKP--DIESVLLEYITLEYHETIMGAVGFSAKKSLHNTLDKE 120 Query: 95 -LMVVAGTCFTKMAPVIQ-----------RLYDQMLEPKWVISMGACANSGGM---YDIY 139 ++V+ G + + + + ++G C++ GG+ Y Sbjct: 121 FILVIEGGVSLGNHAHFLTSGADSITGEEECKEVAQKAQAIFAVGTCSSFGGVQAAYPNP 180 Query: 140 SVVQGVDKFIP-VDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 + G+D F+ + IPGCPP + +++ + +E P + Y N+ Sbjct: 181 TQSIGIDSFLSQRIINIPGCPPSEANIIGSILYY--ILLQELPPTDSLHRPIWSYGKNLH 238 Query: 199 S--ERERKRGERIAVTNLRTPD 218 ER+ K V + P Sbjct: 239 DMCERKAKFESGDFVQSFDDPH 260 >UniRef50_B9L9V0 Hydrogenase n=1 Tax=Nautilia profundicola AmH RepID=B9L9V0_NAUPA Length = 306 Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 62/183 (33%), Gaps = 39/183 (21%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVHD-VARFGAEVLRASPRQAD----------------LM 96 IW C V + + V + + RF V + +D ++ Sbjct: 41 IWLQALSCDGCSVNFLNAEIPVTEILNRFANIVFHPTIMASDGKEAMDILMNYKSDNMIL 100 Query: 97 VVAGTCFTKMAPVIQR--------LYDQMLEPKWVISMGACANSGGMYD---IYSVVQGV 145 VV G T M + + E K +++ G CA G+ D +Y+ V Sbjct: 101 VVEGAIPTAMPHACMMGEMFVNDIILKKAKEAKAIVAAGTCATFAGICDMKNMYTKAGSV 160 Query: 146 DKFI-------PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 F+ PV V +P CP +P+ + L I + P + + +N Sbjct: 161 KYFLETNNINTPV-VNLPTCPMKPKHLLYTLFY---YIKHKSLPPLDMSHRPIKFFSNTI 216 Query: 199 SER 201 ER Sbjct: 217 HER 219 >UniRef50_A4YF94 NADH ubiquinone oxidoreductase, 20 kDa subunit n=8 Tax=cellular organisms RepID=A4YF94_METS5 Length = 322 Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 44/157 (28%) Query: 94 DLMVVAGTC--------FTKM---APVIQRLYDQMLEPKWVISMGACANSGGMY---DIY 139 D+++ G+ M P++ + + + +++++G CA+ GG+ Sbjct: 67 DILLFEGSIVRGPAGKGTFNMFAGKPMMWWVREIAPQANYIVAVGDCASFGGIPAADPNP 126 Query: 140 SVVQGVDKF-----------------IPVDVYIPGCPPRPEAYMQALMLL------QESI 176 + G+ +PV + + GCP PE + L L+ QE + Sbjct: 127 TESTGLQFHRKEMSGFLGKDFRCKSGLPV-INLSGCPVHPEWLITTLTLILRGEMNQEML 185 Query: 177 GKERRPLSWVV------GDQGVYRANMQSERERKRGE 207 + RP + + Y S +E E Sbjct: 186 DEFNRPRIFYATTTQFGCPRQPYFTYKISTKEFGHKE 222 >UniRef50_A5GFC8 Hydrogenase (NiFe) small subunit HydA n=6 Tax=Proteobacteria RepID=A5GFC8_GEOUR Length = 378 Score = 53.1 bits (126), Expect = 6e-06, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 62/190 (32%), Gaps = 44/190 (23%) Query: 54 IWPYNFGLSCCYVEMVTSFTAV-----HDVAR--FGAEVLRASPRQAD------------ 94 IW + + C ++ S D+ + ++ S QA+ Sbjct: 56 IWLHFQECTGCSESLLRSTHPTISTLILDMISLDYHETLMAGSGAQAEKSLHDSMLANKG 115 Query: 95 --LMVVAGTCFTKM---------APVIQRLYDQMLEPKWVISMGACANSGGM---YDIYS 140 L+VV G TK ++ L +IS+G CA+ GG+ + Sbjct: 116 KYLLVVEGAIPTKESGIYCKVGGKTALESLQHAASNAAAIISIGTCASYGGIQSVGPNPT 175 Query: 141 VVQGVDKFIPVD---VYIPGCPPRPEAYMQALMLLQ--ESIGKERRPLSWVVGDQGVYRA 195 GV + D + IPGCPP P + +M + I P +G Sbjct: 176 GAVGVRDIVK-DKPIINIPGCPPSPYNLLSTVMYYLTFKKI-----PELDALGRPKFAYG 229 Query: 196 NMQSERERKR 205 E +R Sbjct: 230 RKIHEHCERR 239 >UniRef50_B0TDW1 Uptake [ni/fe] hydrogenase small subunit n=11 Tax=Bacteria RepID=B0TDW1_HELMI Length = 395 Score = 52.7 bits (125), Expect = 8e-06, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 63/214 (29%), Gaps = 40/214 (18%) Query: 28 PLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAV-HDVA------R 80 + + R IW +CC + + D+ Sbjct: 53 AASLGLEPGAAGAIAEALETKRRMPVIWRNFQECTCCTESFIRTQHPKASDIIMTMISLD 112 Query: 81 FGAEVLRASPRQAD--------------LMVVAGTCFTKM---------APVIQRLYDQM 117 + ++ A+ QA+ ++ V G K + L ++ Sbjct: 113 YHETLMVAAGHQAEEAVAKAIEDNRGNYILAVEGAIPVKDGGIYCCIAGRTAVDMLKEEA 172 Query: 118 LEPKWVISMGACANSGGMY---DIYSVVQGVDKFIPVD---VYIPGCPPRPEAYMQALML 171 K +I+ G+CA +G + + V I D + +PGCP E + Sbjct: 173 KHAKAIIAWGSCAVNGCVQAANPNPTGAVPVQDIIK-DKPIINVPGCPAIAEVMAGVITH 231 Query: 172 LQESIGKERRPLSWVVGDQGVYRANMQSERERKR 205 + ER P G + + ++ +R Sbjct: 232 VL---TFERLPELDSQGRPKAFYGHRIHDKCNRR 262 >UniRef50_A5I2W4 Hydrogenase small subunit n=13 Tax=Firmicutes RepID=A5I2W4_CLOBH Length = 290 Score = 52.7 bits (125), Expect = 8e-06, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 36/157 (22%) Query: 52 NSIWPYNFGLSCCYVEMVTSFTAVH------------------DVARFGAEVLRASPRQA 93 N+IW G S + ++ + F E + Sbjct: 36 NAIWLEVTGCSGNIISLLNAENPGLIYILRNIVNLTFNNSLMGAEGEFAYEQFLNTLDTE 95 Query: 94 DLMVVAGTCFTKMA--------------PVIQRLYDQMLEPKWVISMGACANSGGMY--- 136 +++V G TK ++ + + K+V+++G C++ GG+ Sbjct: 96 FILLVDGAVSTKENGYYNIIANYRGRPVTALEAIKMAGEKAKYVVTVGTCSSYGGISAAK 155 Query: 137 DIYSVVQGVDKFIPVDV-YIPGCPPRPEAYMQALMLL 172 S + VD I +V +PGCP P+ + L L Sbjct: 156 PNPSGSKSVDAVINKEVIKLPGCPCHPDWVVGTLAHL 192 >UniRef50_C0QP84 Putative [NiFe] hydrogenase, delta subunit n=1 Tax=Persephonella marina EX-H1 RepID=C0QP84_PERMH Length = 249 Score = 52.7 bits (125), Expect = 9e-06, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 61/167 (36%), Gaps = 34/167 (20%) Query: 61 LSCCYVEMVTSF-TAVHDVARFGAEVL-----RASPRQADLMVVAGTC-FTKMAPVIQRL 113 C + H + + R + D+ + G+ + ++++ Sbjct: 12 CDGCQISFFDISEMLSHLEEKVRIKYFIEGQDRNEFERFDISFIEGSVSTPEQEEKVKKI 71 Query: 114 YDQMLEPKWVISMGACANSGGM-----YDIYSVV-----------------QGVDKFIPV 151 D ++V+++GAC++SGG+ + Y + + V +I V Sbjct: 72 RDV---SEYVVTIGACSSSGGIQSVRNFSDYKDIVCSVYPKPEMIKSLERSRPVSDYIDV 128 Query: 152 DVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQ 198 D I GCP EA ++ + + +GK+ + V + + N Sbjct: 129 DFEIRGCPINKEALLEVIYSV--ILGKKPYNPEYPVCMECKRKGNPC 173 >UniRef50_UPI000197A0EB hypothetical protein HcinC1_01015 n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI000197A0EB Length = 554 Score = 52.3 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 37/159 (23%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVHD---VARFGAEV-------LRASPRQA--D------L 95 +W + + C + + + E + + +Q D + Sbjct: 63 VWLHMAECTGCSESFLRLDKPGVESLLLEYISLEYHETIMGAVGFNAKQCLHDTLKEEFI 122 Query: 96 MVVAGTCFT-KMAPVIQ----------RLYDQMLEPKWVISMGACANSGGM---YDIYSV 141 +V+ G + A + + + + ++G C++ GG+ Y + Sbjct: 123 LVIEGGVSLGENAYFLTSGADSTNGENECLEVARHAQAIFAIGTCSSFGGVQAAYPNPTQ 182 Query: 142 VQGVDKFI--PVDVYIPGCPPRPEAYMQALML--LQESI 176 QG+ F+ P+ V IPGCPP + +LM L + I Sbjct: 183 SQGISTFLRQPI-VNIPGCPPSEANMIGSLMYYILLQEI 220 >UniRef50_D2LGK5 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LGK5_RHOVA Length = 358 Score = 52.3 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 52/183 (28%), Gaps = 64/183 (34%) Query: 49 GRKNSIWPYNFGLSCCYVEMVTSFTA-VHDVARFGAEVLRASPR---------QA----- 93 R + +W + G C + ++ + + + G + A P A Sbjct: 22 ARLSLLWLQSGGCGGCSMSLLNADSPDLFAALDLGRIDVLAHPSLSEASGEDYHALIARI 81 Query: 94 -------DLMVVAGTCFTK-------------MAPVIQRLYDQMLEPKWVISMGACANSG 133 D++ V G PV+Q + + VI++G+C G Sbjct: 82 LSGQQPLDILCVEGAILRGPNGTGRFHLQPGTGKPVMQLVAELAACAGHVIAIGSCTAYG 141 Query: 134 GM------------------------YDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169 G+ + G+ I GCP P ++ L Sbjct: 142 GVSAAGDNVTEACGLAFEGAEPGGLLGPGFRSHSGLPAI-----NIAGCPTHPGWIVETL 196 Query: 170 MLL 172 + L Sbjct: 197 VQL 199 >UniRef50_A6DCC1 NI/FE-HYDROGENASE SMALL SUBUNIT n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCC1_9PROT Length = 369 Score = 51.6 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 7/95 (7%) Query: 83 AEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVV 142 + S AD V GT L + K +I++G CA+ GG+ Sbjct: 131 LLFVEGSIPLADNG-VYGTIGPSGETYKDHLLRLASKAKAIIAVGNCASFGGVVAANPNP 189 Query: 143 QGVDKFIPVD------VYIPGCPPRPEAYMQALML 171 G + VD + +P CP PE + L++ Sbjct: 190 TGATGVMGVDGINVPIINLPACPVNPETMIGVLIM 224 >UniRef50_Q5HT18 Hydrogenase, (NiFe)/(NiFeSe) small subunit family n=14 Tax=Campylobacter RepID=Q5HT18_CAMJR Length = 497 Score = 51.6 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 38/186 (20%) Query: 54 IWPYNFGLSCCYVEMVTSFTAVHD-------VARFGAEVLRASPRQA----------D-L 95 +W + + C ++ + D + ++ A+ +A D + Sbjct: 66 VWLHLCECTGCSESLLRADLPSFDELVFDFFSLEYHETLMAANGTKAEELLEYVLEEDFI 125 Query: 96 MVVAG----------TCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGM---YDIYSVV 142 + V G T + + L + K + ++G C++ GG+ Y S Sbjct: 126 LAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKT 185 Query: 143 QGVDKFIP-VDVYIPGCPPRPEAYMQ-----ALMLLQESIGKERRPLSWVVGDQGVYRAN 196 G+ + + V IPGCPP + AL + + ++ RP W G Sbjct: 186 CGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRP-VWAYGKCLHDICE 244 Query: 197 MQSERE 202 +++ E Sbjct: 245 RKAKFE 250 >UniRef50_C0GED7 NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GED7_9FIRM Length = 254 Score = 51.2 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 29/149 (19%) Query: 61 LSCCYVEMVTS------FTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLY 114 S C +E + + D+ F P D+ V G+ I+RL Sbjct: 15 CSGCQLEFLNLEPVLLDLLGLVDLTHFVMARRENKPGPYDIGFVEGSIVNP--EDIERLK 72 Query: 115 DQMLEPKWVISMGACANSGG----------------MYDIYSVVQ-----GVDKFIPVDV 153 + ++++GACA GG +Y+ + V VD+++ +D Sbjct: 73 QARRDCGLLVAIGACACHGGLQSLNNGTPQREVEARVYEHPAEVSSLKSYPVDEYVDIDA 132 Query: 154 YIPGCPPRPEAYMQALMLLQESIGKERRP 182 + GCP ++ + + RP Sbjct: 133 KLSGCPINKNELVEFVKSALLGVTPRIRP 161 >UniRef50_Q2J4E9 NADH ubiquinone oxidoreductase, 20 kDa subunit n=29 Tax=Bacteria RepID=Q2J4E9_FRASC Length = 278 Score = 51.2 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 37/163 (22%) Query: 51 KNSIWPYNFGLSC------CYVEMVTSFTAVHDVARFGAEVLRASPRQ-ADLMVVAGTCF 103 + ++W + C C E+++ DV+ F E A+ DL +V G+ Sbjct: 19 RLAVWKFASCDGCQLTLLDCEDELLSLAG-EIDVSYF-LEASSATVDGPYDLSLVEGSVT 76 Query: 104 TKMAPVIQRLYDQMLEPKWVISMGACANSGGM------------------YDIY----SV 141 T+ ++R++ + ++++GACA +GG+ Y + Sbjct: 77 TEQD--VERIHQVRAASRRLVTIGACATAGGIQALRNFADVGDFLAAVYATPAYVSTLAT 134 Query: 142 VQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLS 184 + + VD + GCP P ++ + RRP Sbjct: 135 STPISTHVRVDFELQGCPINPRQLLEVISAFL----ARRRPNI 173 >UniRef50_Q31DZ5 Ni,Fe-hydrogenase small subunit n=4 Tax=Proteobacteria RepID=Q31DZ5_THICR Length = 813 Score = 50.8 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 16/92 (17%) Query: 95 LMVVAGTCFTKMAPVIQRLYDQML-----------EPKWVISMGACANSGGM---YDIYS 140 +++V G M R+ Q V+++G+CA GG+ + Sbjct: 606 ILIVEGAVPLGMGGNFLRIGPQGETGEALLKRVAQHASAVMAVGSCAFDGGVVAAAPNPT 665 Query: 141 VVQGVDKFIPVD--VYIPGCPPRPEAYMQALM 170 GV + + D + +PGCP P + L+ Sbjct: 666 GAVGVSEALGRDDIINLPGCPVNPINVVGTLL 697 >UniRef50_A7IHL6 Ni Fe-hydrogenase III large subunit-like protein n=4 Tax=Proteobacteria RepID=A7IHL6_XANP2 Length = 110 Score = 50.4 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 71 SFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGA 128 + A D++R G PRQA++++V M Y QM P+ V+ +G Sbjct: 41 ALAAGLDLSRAGLTEADG-PRQANVLLVMLPLPAPMLKAATVAYAQMPRPRTVLVLGE 97 >UniRef50_P12635 Uptake hydrogenase small subunit n=8 Tax=Bacteria RepID=MBHS_BRAJA Length = 363 Score = 50.4 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 35/158 (22%) Query: 43 NDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAV------------HD---VARFG----- 82 N + R IW + +CC + S + +D +A G Sbjct: 45 NALETKPRVPVIWMHGLECTCCSESFIRSAHPLVKDAVLSMISLDYDDTIMAAAGHQAEA 104 Query: 83 -AEVLRASPRQADLMVVAGTCFTKM---------APVIQRLYDQMLEPKWVISMGACANS 132 E RA + ++ V G P +++L + +I+ GACA+ Sbjct: 105 ILEETRAKHKGQYILAVEGNPPLNEGGMFCIDGGKPFVEKLKMMAEDAMAIIAWGACASW 164 Query: 133 GGMY---DIYSVVQGVDKFI--PVDVYIPGCPPRPEAY 165 G + + +DK I + +PGCPP E Sbjct: 165 GCVQAAKPNPTQATPIDKVITNKPIIKVPGCPPIAEVM 202 >UniRef50_C1SPM4 Hydrogenase (NiFe) small subunit HydA n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPM4_9BACT Length = 310 Score = 50.0 bits (118), Expect = 6e-05, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 17/98 (17%) Query: 94 DLMVVAGTCFTKMAPVIQR----LYDQM----LEPKWVISMGACANSGGMYDIYSVVQGV 145 ++V+ G+ +M LYD + + V++ G+C+ GG+ + G Sbjct: 103 HILVLEGSIPAEMKKACMLGEEPLYDALKKHLEKASAVVASGSCSCFGGIPASGANETGA 162 Query: 146 DKFI---------PVDVYIPGCPPRPEAYMQALMLLQE 174 + + IPGCP P+ M + + Sbjct: 163 IDIVQYMRETGISKPLIKIPGCPVHPDRLMGTVAYILG 200 >UniRef50_Q1NJF2 NADH ubiquinone oxidoreductase, 20 kDa subunit n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NJF2_9DELT Length = 366 Score = 50.0 bits (118), Expect = 6e-05, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 62/223 (27%), Gaps = 69/223 (30%) Query: 59 FGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQ---------AD----LMVVAGTCFTK 105 C + +V + ++ AD + + G T Sbjct: 13 AACGGCEIAVVNLHEKILELDAAFELFFCPCLLDTKKGDIEALADGEIAVTLFNGAIRTS 72 Query: 106 MAPVIQRLYDQMLEPKWVISMGACANSGGMYDI--------------------------- 138 + +L + + + +I+ G+CA G + + Sbjct: 73 ENEEMAQLLRR--KSQTLIAFGSCAVEGCIPGLANLYDRTAIFNTVYLDNPSLDNPAGIL 130 Query: 139 -----------------YSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERR 181 Y VQ + + VD +IPGCPP P QA+ L + Sbjct: 131 PQTRSQVPEGELRLPEFYDRVQTLADVVAVDFFIPGCPPEPPRIWQAVESLLN---GDPP 187 Query: 182 PLSWVVGDQGVYRANMQSERERK-------RGERIAVTNLRTP 217 P V+G + + + + R ++ + P Sbjct: 188 PPDQVLGAGKLAVCHECPRKIEEKKIKRFYRNHQMISDHRVPP 230 >UniRef50_Q1NM22 Ni-Fe hydrogenase, small subunit n=3 Tax=Deltaproteobacteria RepID=Q1NM22_9DELT Length = 343 Score = 49.7 bits (117), Expect = 7e-05, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 39/161 (24%) Query: 48 WGRKNSIWPYNFGLSCCYVEMVTSFTA-VHDV-ARFGAEVLRASPRQAD----------- 94 + R N +W S C + ++ + V D+ RF + + QA Sbjct: 53 FPRPNLVWLQGASCSGCSLSLLNTEEITVLDLLTRFSRLLYHPTLAQATGNQVTDLLTKL 112 Query: 95 -------LMVVAGTCFTKMAPVIQRLYDQMLE--------PKWVISMGACANSGGMYDIY 139 L+V+ G M + E +++G CA GG+ + Sbjct: 113 TTGVEPYLLVLEGGIPAGMPHACLLAHRPFEEWVSRLAQGADACVAVGTCAAFGGVAAMP 172 Query: 140 SVVQGV----------DKFIPVDVYIPGCPPRPEAYMQALM 170 + GV D +P+ V +P CP +PE + L+ Sbjct: 173 GTLTGVVSLDRHLATRDIAVPL-VNLPSCPMKPEHLVYTLL 212 >UniRef50_A7BI79 Ni,Fe-hydrogenase small subunit n=2 Tax=Aquificaceae RepID=A7BI79_HYDTH Length = 345 Score = 49.7 bits (117), Expect = 7e-05, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 17/125 (13%) Query: 95 LMVVAGTCFTKMAPV---------IQRLYDQMLEPKWVISMGACANSGGMY---DIYSVV 142 +++V G+ + V ++ L + VI++G+CA+ GG+ + Sbjct: 114 ILIVEGSVSPRNKGVYCTVSGKSNVELLKEAAQNAGLVIAVGSCASWGGIPHAEPNPTGA 173 Query: 143 QGVDKFI--PVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSE 200 V + + V IPGCPP + + + + + P +G + + Sbjct: 174 VPVSQILGDRQVVNIPGCPPISDVMVAVIAGF---VITGKPPELDSMGRPKTFYGQTIHD 230 Query: 201 RERKR 205 R +R Sbjct: 231 RCYRR 235 >UniRef50_B5EQ53 NADH ubiquinone oxidoreductase 20 kDa subunit n=10 Tax=Proteobacteria RepID=B5EQ53_ACIF5 Length = 265 Score = 49.7 bits (117), Expect = 7e-05, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 36/144 (25%) Query: 61 LSCCYVEMVTSFTAVHDVARFG-----AEVLRASP--RQA--DLMVVAGTCFTKMAPVIQ 111 C + + D+ R A P A D+ V G+ T + Sbjct: 16 CDGCQLAFLNLGE---DLLRLAELVEIVHFAEAGPVDPDAVVDIAFVEGSVSTPEDE--E 70 Query: 112 RLYDQMLEPKWVISMGACANSGGM----------------------YDIYSVVQGVDKFI 149 R+ + +IS+GACA +GG+ + + + Sbjct: 71 RIQKIRKNSRHLISIGACATAGGLQALRNLADGPGWIAEIYAQPEHIHSLATSTPIAAHV 130 Query: 150 PVDVYIPGCPPRPEAYMQALMLLQ 173 PVD+ + GCP + A+ L Sbjct: 131 PVDLELWGCPVNGRQVLGAVRALL 154 >UniRef50_D2RD73 Hydrogenase (NiFe) small subunit HydA n=3 Tax=Archaeoglobaceae RepID=D2RD73_ARCPR Length = 352 Score = 49.7 bits (117), Expect = 8e-05, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 20/103 (19%) Query: 91 RQADLMVVAGTC------FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMY-------- 136 ++A +++V G + L + ++I++G CA GG+ Sbjct: 108 KRAKILIVEGAVQDEGFCTIHGKDFREHLKEAAEVADYIIAVGQCATYGGIPGAKPWDGE 167 Query: 137 DIYSVVQGVDKFI------PVDVYIPGCPPRPEAYMQALMLLQ 173 + +GV F+ + IP CP P+ + L L Sbjct: 168 PNPTGAKGVQDFLYEVGINKTVINIPCCPAHPDHIIVTLASLM 210 >UniRef50_A0L609 NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L609_MAGSM Length = 282 Score = 49.3 bits (116), Expect = 8e-05, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 25/107 (23%) Query: 94 DLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGG------------------- 134 DL +V G+ ++ Q + ++++G CA GG Sbjct: 63 DLAIVEGSICSEQERTALEKLRQRSDA--LMALGTCAVWGGLPAMNAKTIPIHTMKEQVY 120 Query: 135 ----MYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIG 177 ++ + + +F+ VD + GCP + + Q + + + Sbjct: 121 GDSTVFPGAREAEPLSRFVKVDYAVTGCPIEIDEFAQVVTAILNGVR 167 >UniRef50_P61429 Periplasmic [NiFe] hydrogenase small subunit 2 n=9 Tax=Desulfovibrio RepID=PHNS2_DESVH Length = 324 Score = 48.9 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 39/208 (18%) Query: 5 LTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCC 64 L R +G R + + + + GR + ++ + + C Sbjct: 12 LARQAEDGRMTR-REFMKFCGIVAVAMGMGPGFAPAVAEALQAKGRPSVVYMHGAECTGC 70 Query: 65 YVEMVTSFTAVHDV---------------------ARFGAEVLRASPRQADLMVVAGTCF 103 ++ S D+ A E +P + + G Sbjct: 71 TEGLLRSIDPFIDILMMEVISLDYCETVMAAAGRAAHHALEDALRNPAGY-VCTIEGAIP 129 Query: 104 TK---------MAPVIQRLYDQMLEPKWVISMGACANSGGMY---DIYSVVQGVDKFIPV 151 T+ ++ K VI+MG CA+ GG+ S GV + + Sbjct: 130 TRKGGVYGQVGGETMLSLFSRVASGAKAVIAMGTCASFGGIQAAAPNPSGAIGVREALAP 189 Query: 152 ----DVYIPGCPPRPEAYMQALMLLQES 175 + I GCPP P Y+ ++ L Sbjct: 190 FGIQPINIAGCPPNPVNYIGTVVHLLTK 217 >UniRef50_C2KSS0 Hydrogenase (Acceptor) n=3 Tax=Bacteria RepID=C2KSS0_9ACTO Length = 423 Score = 48.5 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 16/99 (16%) Query: 92 QADLMVVAGTCFTKM---------APVIQRLYDQMLEPKWVISMGACANSGGMY---DIY 139 Q ++VV G+ K Q L + ++++GACA G + Sbjct: 142 QDHILVVNGSIPVKDGGIYCTIGGKSAQQVLEESAENASMILAVGACAVYGSVQAARPNP 201 Query: 140 SVVQGVDKFI---PVDVYIPGCPPRPEAYMQALMLLQES 175 + GVD+ I PV + + GCPP E L + Sbjct: 202 TGAVGVDEIIKDKPV-INVAGCPPIGEVITATLAYILTK 239 >UniRef50_Q30QL6 Ni-Fe hydrogenase, small subunit n=2 Tax=Campylobacterales RepID=Q30QL6_SULDN Length = 293 Score = 48.5 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 17/102 (16%) Query: 92 QADLMVVAGTCFTKM----APVIQRLYDQMLEPKWVISMGACANSGGMYDI--YSVVQGV 145 + +++++ G + P+ + + + + ++++G CA GG++ Y G+ Sbjct: 58 ECEVLIIEGAISEEFQRGGVPIFEIIKNYSKRVQKILTVGTCATFGGIFRESDYKDTAGM 117 Query: 146 D-----------KFIPVDVYIPGCPPRPEAYMQALMLLQESI 176 F+ + I GCP PE + L +++S+ Sbjct: 118 HFDQDRALHNFSDFLDKTISISGCPIHPEVLVNTLYAIKKSV 159 >UniRef50_Q0W6U0 Coenzyme F420-non-reducing hydrogenase (Methyl viologen-reducing hydrogenase), gamma subunit n=3 Tax=Euryarchaeota RepID=Q0W6U0_UNCMA Length = 306 Score = 48.1 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 45/135 (33%), Gaps = 35/135 (25%) Query: 105 KMAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-------------YSVVQG------- 144 + ++R+ K VI+ G CA GG+ + Y+ QG Sbjct: 61 RNKENMERVKKLRQRAKTVIAFGTCACYGGVSGLSILHSRDEILNGVYTNRQGTTTNVIP 120 Query: 145 -------------VDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQG 191 V I VD YI GCPP+ Q L+ L E G+ V + Sbjct: 121 NQDIPDLLYRGYAVGDVIKVDYYITGCPPKEFFLRQILLPLIE--GRIPDLQKKSVCSEC 178 Query: 192 VYRANMQSERERKRG 206 + + + KR Sbjct: 179 DREMVLVKDWKIKRR 193 >UniRef50_B2TM84 [Ni/Fe] hydrogenase, small subunit n=2 Tax=Clostridium botulinum RepID=B2TM84_CLOBB Length = 313 Score = 48.1 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 45/187 (24%) Query: 44 DMVNWGRKNSIWPYNFGLSCCYVEMVTSFTA--------VHDVARFG------------- 82 N + N+IW G + ++ S + ++ FG Sbjct: 44 KARNKEKINAIWLETSGCFGEVISLLNSEMPDLPFVLKNLVNMTFFGSICGDQGEKAYER 103 Query: 83 AEVLRASPRQADLMVVAGTCFTKMA--------------PVIQRLYDQMLEPKWVISMGA 128 S ++ +++V G ++ + + K++IS+G Sbjct: 104 ILDTLNSDKEY-ILLVCGAIPINADGLYTVLATYQGRKITAMELVKQAAQKAKYIISIGT 162 Query: 129 CANSGGMY---DIYSVVQGVDKFIPVD--VYIPGCPPRPEAYMQALMLLQE----SIGKE 179 CA GG S V +++ + + IPGCP P + + L + +E Sbjct: 163 CACYGGPTAAKPNVSQALSVKEYLMRNDIINIPGCPANPVWTLGTVGYLINYGTIDLDEE 222 Query: 180 RRPLSWV 186 RP+++ Sbjct: 223 GRPVAFY 229 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.136 0.396 Lambda K H 0.267 0.0419 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,273,915,000 Number of Sequences: 3077464 Number of extensions: 51729643 Number of successful extensions: 139770 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 495 Number of HSP's successfully gapped in prelim test: 153 Number of HSP's that attempted gapping in prelim test: 138357 Number of HSP's gapped (non-prelim): 737 length of query: 220 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 96 effective length of database: 658,790,820 effective search space: 63243918720 effective search space used: 63243918720 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 90 (39.2 bits)