Reference sequence (query): batch____ Identities normalised by aligned length. Colored by: property
HSP processing: ranked Search cycle: 3
1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . ] 325
batch____ bits E-value N 100.0% 1:325 MDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKFFCIHYRRPRLKAPNDESKENPLPPSPAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR
1 UniRef50_Q52219 RepFIB replication protein ... 307 3e-82 1 99.7% 1:325 1:325 MDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKLFCIHYRRPRLKAPNDESKENPLPPSPAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR
2 UniRef50_Q46775 RepI n=11 Tax=Enterobacteri... 276 9e-73 1 93.0% 25:325 1:301 ------------------------MRLGVFVPTLKSLKNSKKNTLSRTDATEEVTRLSLARAEGFDKVEITGPRLDMDNDFNTWVGVIHSFARHKVIGDKVELPFVEFAKLCGIPSSQSSRKLRERISPSLKRIAGTVISFSRTTEKHTKEYITHLVQSAYYDTEKDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKLFCIHYRRPKLKPPHDESAENPQLPATTGDVSPEMAEKLKLLEKLGITLDDLEKLFKSR
3 UniRef50_Q934T6 Replication protein repA n=... 252 1e-65 1 63.9% 2:300 19:307 -DKKTGEVVTLVPNTNNTVQPVALMRLGLFVPTLKSTARGRKGQMVSMDASAELKQLSLAKAEGYEDIRISGVRLDMDNDFKTWVGIIHAFAKHKVVGDTVTLPFVEFVRLCGIPTARSSAKLRKRLDSSLTRIATNTISFRSKGSDEY--YVTHLVQTAKYSTKNDTVSLQADPKIFELYQFDKKVLLQLRAINELSRKESAQALYTFIESLPPDPAPISLARLRARLNLTSRTITQNATVRKAMEQLREIGYLDYTEVKRGSSVYFIIHYRRPKLRPA--------LPPTKAAPEEPE-------------------------
4 UniRef50_C8QB82 Initiator RepB protein n=1 ... 248 2e-64 1 42.9% 1:324 15:335 VNKKTGEVVHLNPSAAATVQPVALMRLGLFVptDHAKAKSSVNTVKsvDATEDLYHLEVVKREGYKDISIRSERLDMATDFRVWLGIIRSIYDNGTFAGKLKLPFTKFLQNCGFDSKRSNKDMKKRIDDSLMRLRGVTIQFRNDTG----SLTTGLVNSAHYNMAKNEVEIEGDHRLADLYQMDYKVYLRLKAIDHLPRKESAQALYTFIESLPRNPAPVSMKRLRERLRLKSRIAYQNHIVRKALEELKEINYLEYTETKRGRSVYFNITKRNPNLIP-DKSLKLDRSAEDEPQIVDEAMIAKISKLKDSGFSEEEIAKILIS-
5 UniRef50_Q19N91 RepH12 n=8 Tax=Enterobacter... 231 2e-59 1 50.2% 2:300 21:312 -EKESGKDIILRPNSNRTVQSIALMRLGLFVPSPKSVGRQNREYKTvfDATKELQTLSLMESEGFTNISIVGERLNMSVDFKTWMGIIRTYANHPINNDTISLKFTEFLKLCTPENYRSSTASRKRIDASLRRLASVTLSFTSNNS--SKVYTTHLVQSALLDPESDQVVLQVDPKIFELYQYDHKVLMQLKAIKELAKKESAQALYTFIESLPPNPIPISLTRLKNRLNLKTRANSQNATVRKALEELASIGYLKYTEIKKDGKVYFQIHKRDPDLNLNNTQ------PPLEVVEDEEE-------------------------
6 UniRef50_Q19NT3 RepA n=9 Tax=root RepID=Q19... 229 1e-58 1 41.7% 4:281 17:289 ---ESGKTYQLTPNSSKSVQPVALLRLSVFTPVGTKENRDRNFEV---DASDELSCMEIARSEGYDDIKITGVKLSMSTDFKCWLGIIMAFSKYGFTSEKITQTFNEFAKMCGISSTNINKRTRARFKESLMNLASVVLAFS--DSRSGRFTVTHLVQKAMIDPKSDTVELVGDPSMWELYRYDHKTLLSLQVLYILAKKEAAQSLYIYFEAMPAGTLFVNMKRLRERLLLTTPIRTQNQIIRKAMRELESIGYLDYQEVKKGRDIQFQIFKRSPKLALAK--------------------------------------------
7 UniRef50_P05833 Protein repA n=9 Tax=root R... 218 2e-55 1 44.6% 7:282 18:288 ------KQKPLTVNELNTIQPVAFMRLGLFVP----KPSRSSDYSPMIDVSELSSTFEFARLEGFTDIKITGERLDMDTDFKVWIGIVKAFSKYGISSNRIKLKFSEFAKDCGFPGKKLDKKLRAHIDESLRKIRGKSISFKRGKDSQSA-YHTGLIKIAYFNADTDVVELEADERLWELYYFDYRVVLQLHAIKALPRLEVAQALYTFLASLPSNPAPISFERLRERLSLISQVKEQNRIIKKAITKLIDIGNLDASMVKKGQENYLIIHKRSPKLSVINE-------------------------------------------
8 UniRef50_A6TIP8 DNA replication n=2 Tax=Ent... 218 2e-55 1 44.3% 4:276 16:284 ---EIDENKKLMPSRNATVQPVALMRLGLFLPSLK--RKGKDTENISIDASSELQSLELARAEGYTDIRITGPRLSMETDFKVWVGIILAFSKYGLNSSTIELPFSEFATFCGFSSKDKDKGLRTRLADSLIRLRSTTIKLASE--KDRNGVVSGLLSRGKWDEKDDIMELTADESLWELYQFDRQVLLQMFIIRQLANKGTAQALYTFIESLPERPIPLSFARIKRRLMLTSPNNQQNRVINKAIDELKAVGYLDGDVVKKDGEWHLIITRRTPR-------------------------------------------------
9 UniRef50_C8UR54 Probable replication protei... 210 8e-53 1 46.7% 4:275 17:294 ---NTGEIHSLKPNNNSTIQPIALLRLGVFVPTLKStrRGSSVTTNTTNATEELSSLKIVEQEGYEGIEIHGPRLDMDTDFKVWVGITSALFDYAPDDdiITLPFSEFADRCGYPRKRLSKAFRKSIDDSLTRIQQTVVKFRfaAKGHLNNINVNLLAYSSLNTELDVIEIQPQKQLSELYYVDYKRILKLKMLDKLGRKETAKVLYTFFEALPANPAPVSIERLRARLNLKSSVSVQNSVIRKAMKDLEAIEYLKFSEIKNGRKIGFQIHKRNP--------------------------------------------------
10 UniRef50_Q08088 Replication protein n=7 Tax... 206 6e-52 1 41.2% 3:276 17:292 --KDSGEVIQLFPTLKQTIQPKVLLRLGVFVPTLKSTDKGGRKS-HHIDATEPLSRLSIVEGEGYSQIQIYGPRLDMDTDFKSWCGIVYALSNRPLDSeqLELNFPEFAKFCGFDTKRIDKQLKERFDASLTRIARTNISfkIPGTDDQITINMHLVESTYYDSSTGKIIIKPNSKLNTLYRVDGKTRLYLKTLQKLARKESAQALYLYLAELPSTFYRIGFDRLRGRLQLSSHLGNQNATVKKALGQLKEIGFLEYSIDKENGDYVLNILKRNMK-------------------------------------------------
11 UniRef50_B5RKG1 Initiator replication prote... 205 2e-51 1 42.4% 1:278 15:299 INQTTGEVITLSSTSETSVQTVPLMRLGVFVPTLKSTNKakSNVGSNINASDDLRHLELAKSEGFERITISGPRLDMDTDFKVWTGIISVLTDNELESntISIRFTEFAMRCGFSRGRLKAEFREKIKDSLRKLMSNVVEFSKDRgnIEVTKFVQLIGESTVDIGNDKVILTPSKTLKDLYVGEYKILLKLRALKALARKESAQALYTFIEALPPNPIPVSIERFRKRLSLTSRPALQNSTVRKALKQLEDIGYLEYQELKEGNKIAFQIIKRNPSLK-----------------------------------------------
12 UniRef50_B4ABW5 Replication protein RepA n=... 204 5e-51 1 47.1% 1:278 15:295 VQKSTGEEITLVSTSESSVQVVPLMRLGVFVPTLKSTDKAKE-TRTVVNASKDLNQLSIYRAEGFDNVVIKGPRLDMDTDFKTWIGIISVLTDRAFpdGKITLPFSEFAKRCGFPRARMKAELRQKLKDSIVNIMSTVVEFSRDAGktEKTHFVQLMGESTIDIAKDIVVLTPSMSLRDLYASEYRVLLKLKALKELARKESAQALYLYLEALPADPFPVKMERLRERLNLTSRPALQNQVIRKAMKQLEDIGYLKYQELKNGRDIAFKIIERNPKLK-----------------------------------------------
13 UniRef50_C1ME85 RepA protein n=1 Tax=Citrob... 202 1e-50 1 39.0% 2:278 18:286 -QPSTGKLTV---TKNSSVQPVSLLRLGVFTPSCRTEATVT------LNVTEALSSLEIAKQEGYTDIKITGPMLNYFQDFRCWTAIVHSFspDALKGNRIKMPFSEFAKLCGYPSKRYSTKLRNEIADSLTKIRSKSIRFE-KNPGITKFKVAGLLKEAEFDGESDYIILEADERLWDLYRSDHLTLLRKKPLELLTRNETAQALYTFFEALPQHPAPITFDRLRQRLLLNGRIAEQNRKMRTALDVLASIGYLKFYYLVDTSVPTIQITDRNPKLT-----------------------------------------------
14 UniRef50_Q8E8A8 Plasmid replication protein... 198 2e-49 1 34.9% 2:282 16:289 -NLNSGK--LLTISSTTSVQPNVLLRTGVFTPVG---RRTNANDVKAQDLSNDLVNLDVCQKEGYDLVTVRGQRLNIETDFKVWCGIVLVFSKYGYSSNTVKLTFSEFAKFCSYPSRRFDKNLRKQIGDSLGRIQSQSLSFRRKNS--EKAVHTGMLLRAMYDGEEDIVELMADETLWDLYRLDYQVLVSLRVLEKLPRAEVAQCLYLYFTSLPENPHPVSFERLRERLRLETSKKEANRKIKTGIQKLESIGYLSGSFAVKNGEQYYLIDQRYKKLEAAIT-------------------------------------------
15 UniRef50_A4X0T0 Plasmid replication initiat... 198 2e-49 1 13.3% 14:306 6:305 -------------NERSPLLPDRHPQRDLFvaVPKGDMSSMEHPVFSLSTKPDMRPRRYERGGNWIEISPsgLATVHDRDVLIYcqCMGALNEGRKVARTLRFKAHDLLVATNRQT---SGRGYELLKDALRRLQGTQIETNLRQGGKEYFRVFGLIDSAEVVRETRdvEITLSDWVFDAIENNH--VLTLNRRYFFLRKPLERRLYELARKHCGQqwRIGLDTLREKCGSGSSSKEFKRLVGKIIDDDAQHDYMPDYALTLDGEIVVVR----PKKEAAQIPLPLASSVSLRINPDSYDKARQLA-------------------
16 UniRef50_Q3JEY8 TrfA-related protein n=2 Ta... 188 2e-46 1 15.8% 2:274 26:278 -EAETAKIilPCWGKGQRGVPNEMVRSALFSVKNKKQARA------------YLEGVPIV-VVGDGRISYRGQELRQD-DEDIWLQIMHE-AKARPLGKCVEFKPYALLKGVGWA---IKGQSYQRLQISLERMVATALTVSSH--RLGKSVTLPLIQKFERDHGRGPWKVWISSEMVVLFGDVHYTRLEWAMRHQLG--PIAKWLHGLYSSHAR-PYPMKVETLWKGSGsdGLLKTFKVNLKGALNELKAVDFLSDWRIEGNLVYVMRAEKKA---------------------------------------------------
17 UniRef50_C5ANI6 TrfA family protein n=1 Tax... 186 7e-46 1 17.8% 6:280 24:287 -----APVQLPLWAPRKRGLPNPLARCALFTASGKTEPR------------IDFKRSVIASLEGY-EIAYTGEELRQD-DQDVFLQLVHV-ARQEDLGTQLQVTVHSILVALGWGRAKD---AYERLHKSVARLREGTVWVTFSAGglSKGFTGNLIKALDWEG--DKWMLSLDQRMIALFGSDGYTAINWEERLALG--PLAKWLHSFYFTH-REPLPYTVRKLYELCGSKAklKHFRASLKKALDELVAVGFLVEWSLDPKSDKIFVKRRHTPALTAA---------------------------------------------
18 UniRef50_Q6AII2 Related to transcriptional ... 183 6e-45 1 14.7% 7:271 100:356 ------QLFLPNYGESYRHVPNEFTRSALFAVGAKKIPRRLFKNEVIPVIGDNVS------------ITYTGEELRQD-DEDVWLQLIflSDKAIDDSPTIEFTPRYFCKIVGWP---VSGYYYTKLEKVIERLKVTGLKVSARNGGDKVS-NLSLIRKYYIRKGAEewQVWLEPEIVRLFARNSYTTLEWDMRMSFK-SALSKWLHGYYKSH-QKPFPVKIETLMKGCGSKMtiRNFKKELLKSLEELKKAGFLAKWEVNPKTDIVTVTR------------------------------------------------------
19 UniRef50_C7RVT2 Putative uncharacterized pr... 183 6e-45 1 16.8% 8:286 35:300 -------VQLPLWEERVRGLPNSFARSALFTSANRSVER------------ENFKRRKIATLRG-AEIFYTGEELRQD-DGDVFLQIVH-LARQQPLGDVVEFSGYALLKDLEWTT---SKGSYERLRDSINRLSSTtvKTDGSAGHPEKGFGGSLVRKFEWNADAErwRIWLEPEIVVLFGRDTYTRIDWAQRLQLP--PLAKWLHQFYFTH-EKPIGYKVETIKTLCGSrgVLAKFRYKLREALALLVEVGFIVSYDIDSRTDILNVVRAPRRIAVTDVIEGKC---------------------------------------
20 UniRef50_Q07GE2 RB100 n=6 Tax=Rhodobacteral... 179 1e-43 1 14.5% 11:300 4:306 ----------ANPTGSAMGQPidFFVCDFFAAVPKHDLAAMEH--PLFSLSTRPDRRILNYTHNDAEITItgRATIFDADILIFcqLMAAINAGKKTARHLTLTAHDLLLATGRET---SGDGYKRLRDAFERLAGTRITTNITTGAQETTSGFGLIESWEIVRRTrsVSVTLSEWLYRAVLS--KSVLTLSRDYFSLRKPLERRLYELARKHCGRqwRVSVETLLKKSGSTSPRRVFRAMLREIITRDPLPEYTLVEEPGdrPQTLVDLPERAPQLSPEALEEARRLAPGADIYALEAD-------------------------
21 UniRef50_Q3SEY9 Putative uncharacterized pr... 179 1e-43 1 17.6% 9:303 41:317 --------QLPIWPEPTRGVPNVALRSALFGAIAKGKRR-------------YVEREQLA-ALGDIQILYTGQRLDQ-GDLDAYQSVLH-AARHQAMGEQCRVTSYALLKLMG---KTDSGKNRATLHNRLTRLRANAVEIKH----GRYNYIGGLINEAFRCEKTQEWVIVLTPKLRVLFAADEFTHIEWAVRHALDGQPLAQWLHGFYASHA-KPYPMKIETLHRLCGstADLWKFAQTLRKALNAVTEASAVHGERFNYTVRGDVVHIEKIAKGtaKKAAGSWKACAPTPLQQLGDTVLA----------------------
22 UniRef50_C7RW93 Putative uncharacterized pr... 179 1e-43 1 19.5% 5:276 26:274 ----TQPLQLPLWPEPKRGTPNSFIRSALFAAIQSKDR-------------VFLKEATLASQKGIA-VKFTGEQLNQE-DLSVWETLAH-LARQHPLGCMCEFTAHGLLKSLGQHTGQTQ---HKQLHSTIIRLTACAVEITH----EGKTYFGQLVKSGLKDELTSHYRIELNRELIRLFGENQWTALDWQQRQRLRGKLLAQALHAFYSSH-RQPFPIKLDTLRGYVGSRNVQRafKVKLRIALDELVTIGFLTSYDITGDTVTVSRTLAALPK-------------------------------------------------
23 UniRef50_A1VQ75 Putative uncharacterized pr... 178 2e-43 1 20.6% 1:252 28:256 VAEKSLEVQLPLWAEVCRGVPNSVLRSALFGVVRRGPRS-------------FQQRVQKASVEGI-KIIHTGPQLDQ-ADLDVWEQAL-QLARTGGLGCRIQFTASQFLKSIGRGNGKSQ---HEWLKGAFARLAASVVEIKDAH----RAYFGAILHHGGRDDKTGRYVIEMNPKIIELYGLDGWSSVEFDQRMALKKRPLAQWLHGYYSSHA-KPFPVKVETLHRLCGsnAAIKGFKQDLKSALEKLEEV-------------------------------------------------------------------------
24 UniRef50_A0B4V8 TrfA family protein n=4 Tax... 178 2e-43 1 17.4% 1:270 21:276 VETQSHPTQIPLWPANVRGMPNALARSALFNVNKSNAPRSR------------MEKALIASVDG-VEISFSGEELRQD-DADVFLEVLH-LARDTQLNEKVEFTGYSVLKSLGWGT---SVKCYDRLVTTLERLQAGQVKVRFTGNKKG--FVGSLIRKFLWKEGTerWVAYVEPEIVALFSDDDYTRLAREQRQRL-RYELSKWLHTYYHTHA-VPFAHSVRFLHRQCGstKELFHFRANLKKALDELVKEGFLVSWTIDKSDLVHVVR-------------------------------------------------------
25 UniRef50_C7JJ87 Plasmid replication initiat... 177 6e-43 1 11.2% 10:303 22:322 ---------TPNVDGRSVLLPERYPTPDLFiaIPKDDMASMEHPIFSLATKPDRRIFRYEHNGNTVEisIKGLATIHDKDILIYcqLIAKMNQGELPNRTLHLTARDLLV---WTNRQTDGDGYKRLRSAFERLAGTRITTNIKADGEEVTEGFGLINEWRIVRKTneIKVTLSEWLFRMI--EGRSVLTLHRDYFRLRKPLERRIYELARKHCGAqwVVSIEILQKKTGASSHIRVFRSMLR----DLAINNHLPDYAVEINSNTVTFRNRETMDTVKVIEPKLQKPFVDPEGFHDARGVAP----------------------
26 UniRef50_B3E1G9 TrfA family protein n=3 Tax... 175 2e-42 1 15.6% 9:271 35:279 --------YLPEWPDTQRAMPNEILRSALFNCRNRNQAR-------------LFMKDAEIAVIGDGQVIYRGEELRQD-DELVWLHLMH-LAKKTRLGDCIDFTPYSFIKMLGWP---IKGQSYDRLRVCLSRMQATAIRFQSKRLdiSVSLILKFRSRNDNNETLSRWEVWVGEEMRLLFDEEFLTRVNWETRRALP-DGIASKLFGYWSSH-RKPFPVKTETLIKLCGSEMELRHFRIELRKALDVLVKVSFLESWEFREDLVSVTRRH------------------------------------------------------
27 UniRef50_P07676 TrfA transcriptional repres... 174 3e-42 1 17.9% 13:263 143:376 ------------WPDTMRAMPNDTARSALFTTRNKKIPR------------EALQNKVIFHVNKDVKITYTGVELRADDDELVWQQVL-EYAKRTPIGEPITFTFYELCQDLGWS---INGRYYTKAEECLSRLQATAMGFTSDRVGHLESVslHRFRVLDRGKKTSRCQVLIDEEIVVLFAGDHYTKFIWEKYRKL--SPTARRMFDYFSSH-REPYPLKLETFRLMCGSDsrVKKWREQVGEACEELRGSGLVEHAWVNDD--------------------------------------------------------------
28 UniRef50_C9Y5R6 RepFIB replication protein ... 174 4e-42 1 47.0% 2:203 15:211 -KKESGESYELTPNSNKTVQPVALLRLSVFTPVSPKEKGKRD---FLIDASEELSSLEVARQEGYTNIKIQGAKLGMSTDFKTWIGIISAFSKYGYTSDKICLPFSEFARMCGLRPTDINGRARNRLSESLFNLSSVTLSFRSQDGK--RSLVTHLVQRAQLDMETNEVEIVGDPSLWELYRYDHKVLLGLKALSALSRKESA--------------------------------------------------------------------------------------------------------------------------
29 UniRef50_B9TFM5 TrfA transcriptional repres... 174 5e-42 1 17.7% 9:274 45:298 --------QLPLWKDDIRAIPNEILRSALFNAKNRNEARRFFKNEEIGVIGE------------GVRITYTGEELRQ-NDESVWLQLIH-LAKAAPAGRPVEFTAYSMVQALRTAKSKPNPKHIERLCESLRRMQATSLSVYS--PRLGRGISLSMIPRFEWQDEAskWRVQIAPELVELFGDMHYTHLQWRQRLDLP-SGLATWLHGYFASH-RKPMPVKLTTLKKGAGCTttPRKFKQLIVAALTELQRVGFLKRWDVDDNLVSVERHRTTD---------------------------------------------------
30 UniRef50_Q120X5 TrfA n=2 Tax=Polaromonas Re... 173 7e-42 1 18.2% 1:285 74:340 IEQRVLQGVLPLWDDDNRGIPNPLVRSGLFTVGNSDKR-------------EYVPDMVIASLSNY-EIRYTGSELRQE-DLSVWMSLIN-LARKKPISEAIYFTGYQVVKDLGW---RMHSESYKRVQDCIERLKVTGLKIT--TRGHESAYSGSLIRDYGWTErnQKWMVRFEPRISALFMEDTTTLLEWEMRKKipRSTLALWLLSFYSTH-RDPEPNSLGKIYELCRSKDTLSSFRRNVRNALAKLVEKQFLKSFNMD-NDILQVEKLKADKRITPRLVRAK----------------------------------------
31 UniRef50_B4EE90 Putative plasmid replicatio... 172 2e-41 1 14.3% 17:309 26:325 ----------------SRLAPLRHRQCDFFVasPKDDLASMEHPLFALRAGDRRIR---VYERKETRVTVkgCATIHDKDLWIYcqLVAAKNRGREITRTVRFTAYDFLHSTNRDT---SGRAYIRMGEMLARLTGTRIETNIETAGKRERGFFGLIDSaeRDGGDRMVAVEVTLPDWLFRSVDAMQVKTLSPNYFRLRKPLDRRIYELACKHCGNqwKSSIATLHEKSGSADKLFKFRAAIKALAASGELPDYRMAYDPKADNVTFY---ANGPKGYRAEIAAIMKGLPHTSVKAREKAHARKRGRPK----------------
32 UniRef50_C7RW81 Plasmid replication initiat... 171 3e-41 1 11.6% 15:299 18:313 --------------ERSPLLPidFFVCDVFDAALKGDSASMEHPIFSLSKKPDMKTRRYENGASWAEVRpkGLATVFDRDILIYcqLMAAVNDSRPVSRTLRLRAHDLLIATNRDT---SGRGYLQLREALERLQGTQIATNIITGGKETFDLFSLIDRARIVRESReqEIEIVLSDWVFQAVEAHEVLTLDRQYFQLAKPLERRLYELARKHVGQqfKIGLEKLRAKCGAQSTLKEFRRLLQTIIDADQLHDHMPGYGFRLDGDMVEMRTkkLPSSTERGVFIRLSEDAYALGRNYAP--------------------------
33 UniRef50_A1WSW7 Putative uncharacterized pr... 169 1e-40 1 19.6% 7:287 26:288 ------QLQLPLWAETQRGVPNSLLRSALFAAIQRGKR-------------PFLKRQLMASVEN-ASITYTGIRLCQDY-LTVWECLVHV-AREQQLGNRCEVTTYQLLKLL---DKKDTGGNRQVLRRQLAELQATALEVRQ----GRYTYSGSLIDEAYHDEETGRAIIVLNQRIVALYQGDGYTKVSWQIRRDLRTS-LAKWLHGFYATH-RQPFPYTVAKLHELCGSNasLKDfeKTLATALEDLATveHFRYLVERCPGGKSLVHVTRNPDAKLPLNPQICG--------------------------------------
34 UniRef50_Q21QG5 Putative uncharacterized pr... 169 1e-40 1 22.1% 2:273 64:319 -EQIVLDLALPDWNDLFRGVPNGFLRSGLFTARSKSVR-------------EEIKGTRIASLSNF-DVHYTGCELRQD-DLSAWIALMT-RARLQPIGDKIYFVAYSLVKDLGWS---LNSASYARLKSCIERLKLTSLKIGSKD--QKSAYVGSLVRDFAYDELDDkwMIRVEPGIAKLFVDENTTFLEWEERKRltRNSLAQWLHGYYSSH-TIPIPISIGKLRELCESGqsLPNFKIRTRQALELLVENGCLLRYSITNDLVYVTKSPRR----------------------------------------------------
35 UniRef50_A1VX05 TrfA family protein n=1 Tax... 169 2e-40 1 17.0% 9:267 93:335 --------QLPLWPEVMRSLPNEILRSALFNARNRKNPRSMMKSEP-------------VAVIGDGRISYRGEELRQD-DETVWLQLVH-LARRHVAGQLVEFTAYSFCKDIDWS---INSKSYLRLKECLRRMQATSLDVYSK--RLERGVSLSMIPFFEYEDSeqRWRVRIAPELVELFGDNYFTRLEWAQRLQLP-DGLATWLHGYLATH-RVPHPIKIETIAFGAGLttSKPELRRLVKRALTNLVNCGFLTEFDVNEDLVTV----------------------------------------------------------
36 UniRef50_C4UAU7 Plasmid-related transcripti... 168 2e-40 1 15.8% 1:278 29:288 IKQNDRALSLPNIGESYRIMPNHIARSSLFAPVNSKNNLV-------YAGTTLVSRV-------DAVIKFWGEQLD-ESQADVWMQAMYEASKHS-LGEPIVISRSKFLRAIGRNT---SGANYEWLHRSMLCLEQAMFSIETNRFATGSQSPLHMIDKFEYDNEIKSHIFQIDPRWIRMYYNNEFSLINWSQRlfFHNQDIAKALQRLILTSNEQQQKHSLEWLKSKLIYTGRLRDFKNSIERAGAELKRVGIISDFCIEAGSKGKLQVSMTRLKQS-----------------------------------------------
37 UniRef50_B9KX96 Plasmid replication initiat... 168 3e-40 1 14.0% 23:293 51:323 ----------------------DFFICDILDALPKDDMASMEHPVFSLATRPDLRVLDYAH--NGVRITVtgLATLFDKDILIYcqLMAALNAGRAISRTLHLTAHDLMTATHRET---SGDGYQRLREAFERLAGTRITTNMEVGGREITTGFGLIESWQIVRRSrqVMVTLSEWLFQAVL--TKSVLTLSRDYFRLRKPLERRIYELARKHCGQqwRVSIATLAKKSGSASPLRVFRKMIRDMIAADSLPGYSLAEEPGD----LLCVTRRAAVLAPGLAPALRDTTLERV--------------------------------
38 UniRef50_C4GNC9 Putative uncharacterized pr... 164 4e-39 1 13.8% 21:281 58:326 --------------------PndFFVIDVFDASLKDDLASMEHPIFALKNGDTRNRF-YEHNGNTVTIMPSSFGCATIYDKDVWIYCISAlnNNEPINRVVRFTAYDFLVSTNRNT---SGRYYQLLREALFRLAGTRIITNVKTGNYRLESNFGLLDKVDidENSPIIAIEVTLPDWLFRSIEAKQVKTISADYFRLRKPLDRRIYELCAKHCGKqwHISLEILHRKSGSMATLRRFRQAIKELVASNDLPDYRLSYD-DKRDVLKVQNRDLSKFLSLKN--------------------------------------------
39 UniRef50_Q1H9T9 Trans-acting replication fa... 163 7e-39 1 12.4% 13:262 133:365 ------------WDDDMRAMPNDIARTALFTVRNKRKPR------------DALQSQPIYSYNQDVQITFSGIELRAEDDELVWQQVL-EYSKRFPIGSPITFTFYELCSDLAWP---INGKYYKKAEDSLTRLQTSALQF--QSRRLGNMVSLSLLRRfdRGKRTSRCQVELEDEMVYLFAGDHYSKFVWEKYRELT--PTTRRLFDYCASH-KQPYPLALEKFQKMCGstARAAKWKEQSKAACDELKKSGLVADAYVNG---------------------------------------------------------------
40 UniRef50_D1EBW3 TrfA family protein n=1 Tax... 163 7e-39 1 16.5% 14:267 50:290 -------------GSKHRAMPNDFARSCLFTARNHRVPRKTFSREKLFHISEKV------------EILYTGTELRSVDDELIWMQLVD-YCRRFPLGNYVEFDIRQLIKDIGWDT---SGAYYKRVRESLSRMKATEIYIK-NGNTYGVSGGISLIDNynIKGEPTRYKVSIDKKLIVLFAGNTFSNIPWSQYKKL--SPMARRLTDYVFSH-KHPNPIPIPAFLAMCGSdsPAKTQNQNAKKICAELTEAQLVKTAFVLSGKIIV----------------------------------------------------------
41 UniRef50_Q0AD11 TrfA family protein n=2 Tax... 163 8e-39 1 15.0% 14:266 80:317 -------------QKDMRHIPNDYARSSIFTARNKREPRKMLMHEKLFHYNEHIS------------ILYTGIELRAEDDEIVWLQIL-KYGESVPLGEPFEFSIKDLVRDMGWP---KNGRNYDRARECISRLKANEV-LALNTKAYGKSEAISLIQNydNECKPTQYRVWIDPNLIVLFAGNTFTNHVWKVYRDL--SPVARRLADYIGSH-QHPYPLNAEKFRQMCGSTdnARSWRQSVKKACAEVQEAKIATLVTLDSNDQI-----------------------------------------------------------
42 UniRef50_UPI00016C4D67 replication protein A n=1 T... 160 5e-38 1 13.3% 20:283 12:288 -------------------QPDLFA--GTFADIPIRDQRDTME-RPFFSLSKKPRLAPIEYQVGDVWVEVtgMASIWDADILIWaqVTEALDRGHAPSRVIHFHPYNLLKSVRRS---VGGDHYRRLREALNRLTHTAVSTNIRVQGKKKSASFHWLESWTEegETAHMTMTLPDWLYTGIVAKGGV-LTIHEDYFLLTGGIERWLYRVARKHAGTqwTFTMRQLYAKSGSAARFSDFALDVRKVVEADSLPEYALAVHRTAEDEVVTFLPraDPRFQPPRAR------------------------------------------
43 UniRef50_Q2Y567 Plasmid replication initiat... 158 3e-37 1 13.2% 7:272 117:400 ------EEDRSKKRERSKLLPARYTNQDFFVasLKDDHATMEAPVFSLKTQKDLTPWEWTSKDGTKHIEVsgRATQHDKDILIFvqMTEALNRERPdsRAVRFTVHNYLVATNKPTG---GVEYQRLERALDRLKGTTIKTDIKTGNKRVKEAFGILDSWAIIERsrMIAVEITLSKWLYNAIHAHEVLTIHPDYFRLRKPLERRLYELARKHCgsSWKIGLELLREKCGAQSHIRAFRNQVQEISNAHTLPEYHLIYEREADQVTFYVKNQ-----------------------------------------------------
44 UniRef50_A8IP54 Replication protein A n=67 ... 156 9e-37 1 15.0% 2:281 10:281 -ERGQLDLFRALPGDFAPRDAQDLMAYPFF-----SLSKTHRVAPIDFRTGNIAIRVEAVPDHGMATI--------WDADILIWaqIVEARDAGLRTSRLMAATPYEILTFVGRGT---SLRDYQRLKAALDRLQSTTVSTSIRQPAEGRRHRFSWINEWqrNGRPDGVDLILPDWFYRAVLDDALVLTIDRAYFGLTG-GLERWLYRLVRKHGGRqwRFDFRHLHQKSGSLSPFKRFAFELKDLIRRQPLPGYMLFVEVEVGGRLLLAFEPASPCGQPVD--------------------------------------------
45 UniRef50_A1VVJ9 Putative uncharacterized pr... 154 3e-36 1 17.6% 7:267 72:316 ------QLAFSKWDEDRRGVPNPLIRGGLFSTRTSKARLS-------------FKSAKIASLSN-ADILYTGEELRQD-DLSVWLAIVH-LGRNRVLGEPIYFTAYAIIKDMNW---RMHSDSYARLRNSIDRLKVTSIKITLRN--ERSGYAGSLIRDFLFDggKSSFVVRLEPPIASLFLHENTTLVEWAQRRQIGSKalTLWLHMFYSSH-REPIPYSVSKLREQCLseKDLSNFRARLRKSLETLISVGLLVSYAILDDMVHV----------------------------------------------------------
46 UniRef50_C5SIJ5 RepA n=1 Tax=Asticcacaulis ... 154 4e-36 1 13.8% 2:306 44:357 -ETERGHLDDANPVKRQALLPNRRPEDLLYfvVLKDDMASMESPIYSLSKSIDTTIIRYEHNGNWLEisVKGRATIYDKDLILYchIVRAVNEGRPVSPTIRFSAYDFLQ---FANRTKSGVAYNSLRDTLVRLNGTRITTNIVTGKERHESVFGLIesETRDGRMKEIEVKLSEWVFRGIANAE--VLTLHQDYFRLRRPLERRLYELARKHCgeEWAMSMELCMKKAGSKGPLKEFRRMVREIVEDNEQTDHFPDYSVAIEGDSIVFRRKARAKLGGRKEPAK---VAQPKLNPDSYAKARAVA-------------------
47 UniRef50_Q07GB5 RepA n=4 Tax=Rhodobacterace... 154 4e-36 1 15.1% 17:307 1:289 ----------------MSLLPDRHPQKDFFivVPKDDTASMEHPLFSLATKPDMRHLVYQNGENRLEisILGLPTIKDKDILIFcqLMHMKNRGEKIGKRVRFSARELSIATNRP---VGGDHYKRLEQAFKRLQGTQFTTTIRTGKKPGVKIFSLVDQAGFVMQEDTweVVLSDWLMRAI--EANEVVTITNDYFRLRRPLERRIYEIARKHCGEqwQIGLANLQNKTGSNAPLKKFRLNIRQIISD----DHMPFYRMELTSDDLVIFRPRKAKTTLA---------PSITLPDWAEEKARGIAR------------------
48 UniRef50_A1VX58 Plasmid replication initiat... 154 5e-36 1 14.7% 23:254 61:298 ----------------------DFFIADIFDTAIKDDMASMEHPLFALKAGDMRVR---VYERNGNSVTIkgCATIHDKDVWIYcqLIEAMNRGRDdsRTVRFTAYNFLVTTNRP---VDGDSYKRMGDALARLRGTSIETNIITDGQRERAGFGLIDSWRVIEKtrMVAVEVTLSDWLYRSIKAKQVLTLSPDYFRIRKPADRRMYELARKHCgrQWQCTIKTLYEKSGSTANLREFRRTVKTLVESDELPDY-----------------------------------------------------------------------
49 UniRef50_C6XRZ9 Plasmid replication initiat... 154 6e-36 1 13.3% 7:300 41:344 ------EMLDPNPKH-SPLLPERYPMGDLFVcvLKSDMASLEYPFYSLTKKPDRNPRRFEHDGRWIEFriKGLPTIYDKDLLIYahIMREKQRSGKTPKTIVIDPYHFLSYTNRPTG---GRDYEALVDSIERLEGTRYRTNVKTGGFEHDEWFGLFERVKMKTRreRLEVTISDWTMEAIRADE--VLTLHRDYWRLRRPIERRVYEIIRKHCGQqwSIGVDKLHRKSGSQATRREFRRKLHEVVNDNHLPDYDVYIE---NDILHATSRQDFLDSHSASNKIATGRAKKNDLQSSSEE-------------------------
50 UniRef50_A7IJQ2 Replication protein A n=14 ... 153 7e-36 1 16.7% 2:306 24:323 -ERGQLDLFRALPGEFAARDAQDLMAYPFF-----SLSKSHRTAPIDFNAGGVSIRVEAVADHGMATI--------WDADILIWaqIVEARDTGLRTSRLMVATPYEILKFIGRGT---SLRDYQRLKAALDRLQSTTICTSIRQPAEGRRHRFSWINEwdRSGKPDGIELIVPDWFYRAVLDDALVLTIDRAYFDLTG-GLDRWLYRIVRKHGGRqwRFDFRHLHQKSGALSPFKRFAFELRDIIRRQPLPGYRLFLEIEAGGRTLLAFEPAPACGKPVGGFVprRPVPSGTAPSCQREPKPALT-------------------
51 UniRef50_Q934F3 Replication initiation prot... 151 4e-35 1 11.2% 16:284 15:297 ---------------PVRGQHKPYTQTELFAANmkDDLASMEFPLFSLSKRRDTTVREYVSPSTQKRvsVLGAATVFDKDLLLYmqIIEARQAGLPISRTVKIDTYAFLTGTERDPG---GKAYDNMLDMLRRLKGTTIETNIATGGEEETRGFGWIEDYTITRRTkeVVVIVAEWLYKAFL--HYEVLTIDRRYFLLSQPLERRLYELARKHAGDkwKCDIEIMRQKSGSIQSLRHFRADVRDIIKRDALPDYRVALDSSKKPHRIVFYSRDSRALTKELQRI-----------------------------------------
52 UniRef50_B9ZQ39 RepA n=1 Tax=Thioalkalivibr... 149 2e-34 1 14.0% 16:322 3:318 ---------------ESRLEPERYPTSDFFVaiPKVVPKSDMPSMPhfFALKKGDHEPRFYENKGTKVTVTPSYYGMAtdKDLWLYAISQIVAGEDSGHpiRFSAHEFMRATNRPAG---GKSYSLLRQAIRRMDGTRVETNIQTGGeeKTDWFGLigKVDGRGTERLIEFTIPPWLYKSIQS--RDVLTISRDYFRLKKALDRRIYEIARKMCGNqmTIGLENLAARVGGKYPMRRLRFELKQIQERQEMPEYHLILDATKN---VVRFKNRDPGARRAPAYARARG----KLSGYSEDHLRKMALPGEA--TLEDVARRL---
53 UniRef50_B4YK20 RepA n=1 Tax=Tetrathiobacte... 146 1e-33 1 13.9% 79:287 39:250 ------------------------------------------------------------------------------FDKDVWIYCVSKlfKNLPISRNIRFSTYDFLISTNRQTG---GSQYEQFKQSLERLSGTRISTEIETGGLRQADFVGLIDNARvdIQGRTVAVEITLPNWLYRSVEHNEVLAISKDYFRLRKPIDRRIYEIARKHCGneWKISLELLHKKTGITDVLRNFRVAINSLAKADVLPDYHVKFEKESDSVIF---SNRDPDIGAKVMLKRAN--------------------------------------
54 UniRef50_B0T9B3 Plasmid replication initiat... 142 1e-32 1 13.0% 28:274 12:274 ---------------------------DLFIPllKDQRETMERPFFSLQKRKRLKPIEYKSADGEVSVKVegMATIWDGDILIWAA--SALNRLKAEGrsLKVTAYDLLRSIQRDTG---GKGYNDLKAALDRLATTTIFTSIRA-KKGRDRRFSWLDGWDVedKPIALKITLSDWVWEGI-MNEKSVLTMHPDYFQISGGLEKAIYRIARKHAGDqwTCRVSVLHEKTGSDSEPKEFSRMLRKIVEVNELPEYDMAFVTTGDGSQGVRFIRRS---------------------------------------------------
55 UniRef50_A1WDJ5 Putative uncharacterized pr... 142 2e-32 1 11.5% 25:284 23:296 ------------------------AQADLFVVMepIKDDVSTMEFPIFSLSKKPDTQIRTYSRAGKTVRVigAATLFDKDLLIYchIVKAADAGMKVGRRLKLSSHPFLVSTKRSTG---GTAYEGIVDMCRRLKGTTIETNVKTNEQERIEGFGLIEDYKVTQYTkeLEVTLSDWLYR--AAIASDILTLHPGYFSLGQALERRLYELGRKHCGQQAwiSLPLLQEKAGSVQEARYFKQEIKGILKVNRLPDFKLYLDTSTKPNQLVYVTRDSRKLMLEATQK-----------------------------------------
56 UniRef50_A4G755 Putative uncharacterized pr... 141 4e-32 1 17.0% 3:272 82:359 --RRGAETYLPTLSDVAQVLPNALLRCALFSSSRKV--PTLNDQVLSGDTSLLVVNKTIASFNN-VTVTLNGYELCQF-DRIVYATCLDYYRERPLSPEtvGTTFYEFAKRMGRS---YSVRLHRSIRASLLRLSFAQLRIRRDRLNLekFLSVSFEDSEQGDggSDRLWLRVSESVAELFGPGAWTALE---RKAMDYSGLQGWLASFYATHQG-PLWLSVKKLHEMSGYESRFSNFRKGLCDALDKLKapSCRIAEYHFSNDGTKIQVHR-----------------------------------------------------
57 UniRef50_A3T343 RepA n=2 Tax=Rhodobacterace... 140 7e-32 1 11.8% 46:300 4:274 ---------------------------------------------PLFSLSVKKDMAAFQYEQGNVKVKItgRANVFDRDILIYvqLMAAKNEGQEIGRRVRISAHDLLKATNRHT---TGQAYATLRRALTRLQFTQIETNIHDHGLGEWRSISFITDARidSTGRLLSVELEMGDWLVKAIENKNVLTLHKAYFQLRKPLERRLYELARKHCGKqwRIGLDKLQHKTGSTSTSKEFKRLVKAICRADEQLSHMPDYRFRLLHDILEVSPKpdAPASSLVDTVRLSAEAYEKAREAAPT-------------------------
58 UniRef50_A4XET8 Plasmid replication initiat... 137 3e-31 1 15.8% 28:299 14:308 ---------------------------DLFLPymRDQREMMERPFFSLAKSKRVKPIDYTSPDGKLWVHVSgmATIWDADILIYCavLADMARRgdVPRKLHLMPYDLLRAIGRPT---TGRAYELLGQALDRLVATTIKTNIRAEN-RREATFSWLDGweKTERSRGMTIELSNWFWEGVMMKGGVLSIDRAYFDITG-GRERWLYKVARKHAgeGFAISMPVLFEKSGAEGEYRRFKFEILKLAEKNALPGYGLSVETARGGEPMLRMRraDRALPEAGRQGAEARTVASTAPDVSP--------------------------
59 UniRef50_B6IXW9 Putative uncharacterized pr... 137 4e-31 1 15.8% 32:272 17:272 -------------------------------PLIGSVKNERSIMVYNFFALTKEKRlpIRYQDGKVTIEVKgiATIYDKEFLIYIamVDKMNRGEPVSQVFSFSGHDFFRVCRVSAG---GKSYDRISGALERLQGTQIKTNIETGGEGTDEWFSWLKSAKAEYRkkRITVELCDWLYRAILKDNRMLTYDPAYFDLP--PLEKRLYEMARAHCGNqfKINLEKLRLRVGAETDLRQFRYKLAKIAEklPEYGFKLINDPNSEGGTKGQRTQ-----------------------------------------------------
60 UniRef50_A9H5J3 Putative replication protei... 137 4e-31 1 16.1% 11:271 1:263 ----------MMPAADSWRQPDRR-----FVVTGSARPRDIRDLmpFFALGHVARLEPLRYRSRQMEIVVegMATIRDADILLWlqIVDALNHDLWVSRHVRFTPWRLFQDLGWADGTHQ---YRRLHGALARLAETRVTTSLRQGPEWREKPFAWISDVRISRE-DGVALTLPDWLMEMACDRSHVLSVDPAYFRLYG-GLERWLYRLARRHAGRqwRFDLRDLHARSGTLSPWRNFVIDVAGIARRQVVPGYDCKVIYGGKQPVLRISP------------------------------------------------------
61 UniRef50_A9M4U4 Trans replication factor Tr... 137 5e-31 1 15.7% 7:267 4:260 ------KLIEKPWAKAVRCLPNELARYALFTVGTSQERRYYTKPVLLGLIDGSHAPMEL---------QFVGPELRQD-DLDVFLELLH-YARDADLSGKLKFKRAELMKSLGWARTPF---YYERLLQCMRRLGQSNLetRRDNGDLIQHRffNLVDSFEYKDVNGawHYRLPVELVKFFTASGFARIDLKRRQALKNNHIAKWLQFYFAShaNNKYAVSVEKVMHSCGSksDLKTFRQKLKAALKLLKAAGIVDAYIDKDSDRIL----------------------------------------------------------
62 UniRef50_Q21QH1 Putative uncharacterized pr... 137 6e-31 1 15.6% 24:293 1:268 -----------------------MAVSCLFTA-ARGERK-------------IYGKLTPVYCEANLEVYFKGEELREDTDKLVWLQLMH-MARGRTFNEevTFTANRFLNDLGWDN---SGACYKRLSDALDRLQNAQIKVMGKRNGRKTGWIthIAGKAMNKVGPnrWTVRMDHFAAHMYQAGMIEIKSDQQYKELRT--MSRKILDMVLASPTDLISIHRDDFIKFLGLntNIRSAKQNIKVALEELRSPGYIHHFAFDAANVLHINRTAEAprGTPPNIRIHKAPEMENN--------------------------------
63 UniRef50_Q6NDW1 Replication protein n=4 Tax... 136 1e-30 1 12.3% 12:287 94:398 -----------MPQRVLREPPTDDAQLMFFVPtaPIKDDVNLMDVAPFTLGKNVRQGVITYEMKDCLITIEgvGLATVFDYDIFLNMVSYLakGLRPSLPPKMYRPTAAHLLKFSRRASGGRQYQEIEAALRRLSKTSITITNLAGGKRRQVDthTIISSTNTGKVDQIEIRIPDWVYSSvsDKALPLLTLHPDYFLITSGLGRFIYRLARKAAgdEARYSVAELHKRSGSSREPRKFLFDLKEFvqTFPMPDFDLALEQGKGGPILLMKRRPAMPTTPEVIQLAAN--------------------------------------
64 UniRef50_Q1N8B2 Possible replication protei... 136 1e-30 1 12.6% 8:325 4:338 -------ETSPTVLGGRRVQFEMFFTLPDFSDilRDYQETMQRPFFSLSKKKRIKPIEYVSPDKSVTVHVsgMATIWDADIMIYLAslNELRERgdLSPTIRLQPGDLLKRVCW---GISGRAYERLIGALDRLQATTIKTNIRANSKSRETTFSWIDSYThdERTQrmEITLSKWFFDGV-MDKRNVLAISPLYFEITSGLGKWLYRASRKHAgeGFTIGFETLHQKSGSESSLPSFKNKILELARANSLPEISLEvaDTPRPKLKMVMRRHLEEQSAKALEVAQSALPPPQAARPAPTRAKPAavPEPASFVNASLTRGLIAK
65 UniRef50_C5A9D3 TrfA family protein n=1 Tax... 136 1e-30 1 14.1% 3:299 21:320 --TTGGEETVAWPSPFT---PNALLRFALFGA--QRERMAAAKIFPRQSSTTD-GRFLIAETAHY-RIEYDGDEALNADDLMVLLVCFAIARNAGDMGAYVPISLSECNRYLWKSR---SGKNTLLFRQALMRLYKGYIKITVDGVGIKRQRFLANYDNDDTDSNNPVYWIRIDKGMAPLFEADATEI--DVVRMAHLNSYLAKWLHGFYSTHDGK-KDYSVGELQELSGSSypLFKFRAKLREAVKELMepLFGEGTTITKGDRLHVVKVSRSMMIGPAKKAAEAEAVPVTVNGHPTR--------------------------
66 UniRef50_Q2QCS5 Rep n=1 Tax=Pseudomonas sp.... 133 8e-30 1 13.9% 32:283 105:363 -------------------------------AIPKDERPTMEHPIY---AVEDGDTRQITYEHNGNKIEItgRATQHDKDIVLFCvlVAAINAGIAVSPTIETTAHELLSFT---RSSTSERGYELLSKAFDRLTGTRmtFESTKDRDGSRRWVGLLDDVEIITrnRMCAIRIKVSDTTFNAAKAMDVLTIPGDYFGLRSAIAKRIYELCRKHCGdqWKIGLALLQKKVGSAQAEKKFRAKVKELAEAGSLLDYFMTYLPDEDAVLFFNKSDAGKAALLKATR------------------------------------------
67 UniRef50_B0URA6 Putative uncharacterized pr... 133 9e-30 1 12.3% 28:303 12:308 ---------------------------DLFLPylRDQRETMERPFFSLSKNKRLKPIEYTSPDGKVFVSvfGMATIWDADVLIWAatLSRLKKAgdIPRTLHCQPYDILKTIGRATG---GQEYRLLREALGRLQSTTIITNIRAErkTKKRQFSWIESfeETQQSRGMSITLADWFYEGVVMDGG-ILSIDPAYFTISGGRERWLYRVARKHAgeGFAIPLRTLFEKSGAEGEYRRFKFELQAIVRRNNVPEFvrLEEDERGGEPLLRMVRRDLIGDIAdpKAPRRRKAKTPATSPAPSVSK----------------------
68 UniRef50_B0KMB8 Putative uncharacterized pr... 132 1e-29 1 16.8% 68:258 1:185 -------------------------------------------------------------------MVYTGAILDQ-GDLNVWGAVLHQAQEQE-LGSECKVTAYRLLKLLG---KTDSGKNRKDLEACISRLKATALQIEVGGYSYEGSLI-HEVYRGQSERSKRLYVIRLNSKLHVLFNGKQYTNVNWSVRQALHGKPLAQWLHGFYSSHA-KPYDYKVETLHQLCRSRasLSDFKKDLRRSLECVVSASAAEGQ-------------------------------------------------------------------
69 UniRef50_B2TGW7 Putative uncharacterized pr... 132 2e-29 1 12.6% 32:278 35:297 -------------------------------VTPKDDLASME--IPLYSLSKHSDTEQRVYQRGNRTVRvvGAATVFDKDLILYvqLVERLNRNLPVSRTVQVESFDFLKATSRDTSRSG---YESIFNMLRRLRGTTIETNIPTGGKIQTDGFSIITDYsyNKKKDEhtVTLSDWLYN--GLLELEVLTLNRQYFQLGKAIERKLYEVGRKHCGTewAVGIDLLMEKIGFRRDRANFRAELREIIRADSLPDYRIALDHSKRPDMVVFCTRNAALLS-----------------------------------------------
70 UniRef50_A9AU55 Putative uncharacterized pr... 131 3e-29 1 14.3% 34:313 73:367 ---------------------------------PREDLHSLEFPLFSLQKGKDTRVRVYRNGEQIVRIIPSGVGAafDKDLLVYAaiCKAADSDIPVSRRIRFKVRDFLKYTRRSTG---GASYERIVDSCRRLKGTIIETNFDTTRPGAnrGYGLIQEYSVITYTaeVELVLSSWTYDLLLSRR--ILTLHPGYFDLGQGLERRLYDLAKKHCGDkfKIGLEKLYGKSGSAQALKYFRRDLIAAMKADKLPEFHIALDDDKAMVVFFRCDRDNRRQDEQLTASIHRELLAKKLSKWYYALRRWDSDARDVGQ------------
71 UniRef50_Q210T9 Replication protein A n=10 ... 129 1e-28 1 12.6% 3:271 2:277 --RDLDEPRRPAPCESER------TRLDPFVVIGGDASPRDQRDlpFFSLSKSPRTKPILYRANDVEVQVFGMptIWDADVLIWaqIVRAENLGLTTSRFFRFTPYQLLRGVGRPTGN---QQYLLLKAALARLQSTVIATTIRNGEHWRRRQFSWINEWehSGRVEGIEFVLPDWFYNGV-IDRSLVLTIDPAYFRLTGGIERWLYRVARKHAGHqwVFEVAHLHAKSGSLARASDFALDIRRIAARQPLPGYRVLIEREGRSELLRILP------------------------------------------------------
72 UniRef50_B1G3S5 Putative uncharacterized pr... 128 3e-28 1 14.4% 3:252 88:334 --RVGAEVYLPGWSATARALPNVFLRSALFAATRGVQADSADLLAG---GSTGPVAEEKIGTFKDTTMMFSGYRLCQF-DRLVYSTCLEYYRDLPICPEEsrTTFYEFASRLG---NSYSVKAHRAIRASLLRLSFAHVRIRQERMNIerLLSVKFEGSESVEggRDALLLRVTTSVAELFGPGAWTAVENDAARY---DGLRGWLANFYAGHAQ-PKPLPAELLHQLCGYGPSKSNFRASLVRALEKLKDP-------------------------------------------------------------------------
73 UniRef50_P60119 Putative replication protei... 128 3e-28 1 14.0% 33:254 29:258 --------------------------------SFRNEIMSMEHPIFSLKGGDTRIRI-YEYGNVIIKIKPTADGIANIFDKDIWIYSISKLqnNSKISKAICFTPYDFFISTKR---NKSGRSYEELRKALSRLKGTIIETNiySKNKKKSLSFGLIDSWKILEEkgMIEIILPEWLYVAL--KNKRILKISEDYFKIRKSIDRRIYEIARKHCGNqfKISTKKLYLKTGSTSLLKMFKHNLKRLVRKNNLPDY-----------------------------------------------------------------------
74 UniRef50_Q8RNX4 Replication protein RepA1 n... 126 1e-27 1 50.0% 11:148 22:157 ----------LTPNSNSTVQPVALMRLGLFVPSLK--RKGKNVESVTIDASEELSKLEIAQAEGYSNITISGPRLSMETDFKVWVAVILSFSKYGRDTNTIELPFSEFASFAGYPDKEKTRVLRERISGSLTRIRSTTLSLSSKNKDK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
75 UniRef50_A9I2G9 TrfA-related protein n=1 Ta... 125 2e-27 1 14.3% 10:267 49:295 ---------LPGINETARAIPNYIARSAIFAPVRRGWRTLHDDTVFLEGSNILLKG--------------SGKQLSEDH-ADIWMHAMY-LQTTALLGEAPTINRADFLRGMGRPTG---GSAYEWLHEGMKDLARFTlsVKYSYGKHPSTRVLAMLGGFDYHEPTGSYTLYADPRWAQIFGNREYALVDWTKRLQM-RHDLSKSLQRLIGTSADIQQKYSLDILKQRAQYTGRMRDFRTSLERSLTELEALQVIAEPHIETATRGH----------------------------------------------------------
76 UniRef50_A1WSX7 Putative uncharacterized pr... 125 3e-27 1 15.8% 8:292 37:273 -------VQLPLWPEPVRAVPNGFLRSALFGAIRKGRRR-------------FVKGEQLAALDGI-EIHYTGERLDQ-GDLDVYESVLH-AVRLQELGSQCRVTSYALLKLMG---KTDTGKNRATLLTRIERLRANAIRIKQ----ERYSFIGGLVDEAYKDEETQEWVIVLNPKLRALYGADQFT-----------------------------PFPFKVETLLKLCGSeaSPTSGRQKLRKALDAVTEASAAhfSYEIRGDLVHVEKKASGTQRLHLAKKAAQRRKPRA---------------------------------
77 UniRef50_A4MFD9 Putative uncharacterized pr... 124 4e-27 1 15.9% 67:261 2:197 ------------------------------------------------------------------KIKFTGVQLD-ESQADVWMQLMHVASAS-PLGEPFNVHSASILEAMGR---QVGGAEYRWLRRAMEALYKATLIIdrIGDGDSNGDGIRMIDRFRYDASRKQYTLVIDPRWVAMYSNQEFARIDWEKRLAIKrqDMAKTLQRLVATSADKVQRYGLDWLKDKLQYTSPLRKFRVALRAALAELERVEVIAAAHIG----------------------------------------------------------------
78 UniRef50_B0U9K2 Replication protein n=3 Tax... 124 4e-27 1 14.3% 3:303 107:425 --PEARRITRPPPDTDAQLM---FWVPAVFDAPIKDDMNLMD--VAPFALSKTAGEGIIRYELKDAIITIEgvGLATAYDYDIVINMISHLarPSLPGRVYRPAAAEILKFCRRD---LGGKQYIDLERALDRLQATRVKITNLHGGKRrtQSFPLIGRYKVVSRtdQIEIEIPNWVYEGIvdGKPTILTLNADYFLINRPIAKFIYRLARKAAGeeARYSLPELHKRSGSKLPPHKFRQAVEDIVQDAQLSPLPDYDLILEKSERSTVLRMRRRAARREGAESSGRESPARESPAREAAPAR----------------------
79 UniRef50_A8ZRM1 Plasmid replication initiat... 123 8e-27 1 14.1% 30:305 22:313 -----------------------------FALIPSQKTLPPSKLVWTRQVAGASGKMLTVTCRGMPDI-----GLPRGIDGDILVSLLNAYVEAgpEDGVIYVTPYAVLTGPGLA---VTKAYYERLAKSLARMKSATYSITDGWFDLErtVTFNLLTDVEYtdERSTLRIQLSERITKSIRDGYVKPLNLSLYRQLSSSG-ARTLYRMLdsKAPYHLTVSLLDWGAQCglDTAPDKIRRALEPMHASLLNEGYLHSVSygRRTSILYVYGERSALAEPEHVEALKRYGvpTQAEKYARELGSKV--------------------
80 UniRef50_C7LHK5 RepA-related protein n=21 T... 122 2e-26 1 12.1% 19:274 75:344 ------------------AQP-DFFAPSLYDVGGRDNRSVMDVAVFRLSKKDKRAGELIRYddGYVEVSAGAHGMASVWDYDIVLMMVSHLtkGGKPGRVFRLHVSDILRFARRGNGSSQVKG---VEAALDRLRGTTIKTVRESGRFRATEAEGLIARYRVLSRTDtvEIEAPEWIyeVTEGKRPEVLTVHRDYFLIEPGIGRFIYRLAraAGRDSAKWAFKTLYERSGSGGSFKKFCFFLRGIIKADDLPEYALCEEAGKDGPLLVMRHRNS---------------------------------------------------
81 UniRef50_Q1MP07 NA n=2 Tax=Lawsonia intrace... 120 8e-26 1 17.7% 21:269 78:332 --------------------PTDLTRCSPFFPMNPKEL-----------GNREFLRDFIITSANWGEITYTGPKLseEDTLMALLAILNGVSHHRKPTetYKGPALPLLKLLGY--TKPSKKDYNRLIRGLKLLTVAGVELTLAGGKtkKRYMTSMLSAVFWDDDKKELAVTVNPFFYEAYYAKTITMIDVLKRVGLKGS-IAKALYRFVQSHKKdvFTGHFLTLADALNmeQPLWKTRQMLKLALAELIKHQLLTKKSRFVEQDIILI--------------------------------------------------------
82 UniRef50_Q21TW5 Putative uncharacterized pr... 120 9e-26 1 16.5% 17:295 64:326 ----------------TRRVPAGMA----FLPT-ELTRAGLIRSPANSNDRPELVKQELAMGRGIQSLVYTGPELGP-KEETAWLAVL-MLARTQMLGTRIYFKIAELLKICGL---NDSADNFVAMRMRLSRLSQAHFSIDYTRKVAGKSRKFHVEThfEIEQETGDTVVWLDPSGVQLYSNLSYQP--WDVRLGLA-TGISQQLLTYVSGHAQdqQTIKVEELQALFGYNGPTSRFVRACKSALKELEVGGIIVEGTSK-------VATARDPDTRQPIQRFVWRRTAKKQSN------------------------------
83 UniRef50_B1J370 Putative uncharacterized pr... 119 1e-25 1 15.4% 26:297 14:281 -------------------------ALDGFVKVPKSFLVTP--FFNSVRSGDSYNKVKIAKYFQYKDLEFTSESLSIFNDFDVFLFIVTETVKQK--SNVIEFWFDDLADFLGIEPNHKDT-YFKRYCETISKLEQIHVAFFLDNVR----YSLRFLELSPAQDKSKKLRLKVddSVNELYGVQRKTIKSLKSDYQ-------RILYLMyrANAENHFSVDLLKFRFQVPDTMAERKFVYNIRKANEALKLKGLIEDFSEVKKgtVSFKVKYTYANLHPKKEKKTDISGFENQGEDE----------------------------
84 UniRef50_D2L841 Putative uncharacterized pr... 116 2e-24 1 15.0% 26:271 43:269 -------------------------ASDLFAARNPGPRL-------------WLEGVELATCWEGAAIRFCGERLDQD-DLDAFLGCALLAFRDGGRTGAARFHLRDLMRLIRPRGRRFATR---RLERSLWRLASARLEIEDEAGDI--HIQARLLNTLLCDRAAGICAVDVSPRIMEGLRGAPGVERLLAIRTPLASSAFHRWLAALL-AHGPACLRLELPALRRLSGLtqPMPAFRIRAIAALQDFLDLGAIAAIEPAGPDRLVIERP------------------------------------------------------
85 UniRef50_A9HQY5 Putative replication protei... 115 3e-24 1 14.1% 39:279 6:246 --------------------------------------PRLLMSGPFFGLAKRPASTAVVFTLGDLAVRVTSEHTnwDADILIWaaLKATRYRNDLPPGRFRETRHALLAFLGR---TASGGQYERLPAALDRLATTRVTI---TPGTASSRAVSFTWLSEWSHRGGVIELRIADWLRDA-ALAPRAVLALDPRYFALKGGLERRLYLLARRHAGRqwSFDLAHLRRKTGIAPSVRDFPAAVARIVRRQSLPGYRLTLE-GRDARVRLHFRPETAWLPA----------------------------------------------
86 UniRef50_A1VBN8 Putative uncharacterized pr... 114 4e-24 1 14.2% 5:272 35:276 ----TGGLAAWNPADERslMPALFLASDLFAATYLRGARAGCRRVNPLVPSAAVAC--------------EGPWLDQ-GDLDVYLACVSLALRQGARTSRLRCHVEEAARLAGMGGRTGAVRFANRLK----RLHEARMEC----GDDRFTAQVQLLSSVVHDVAAGGLRIDFGHEFFDALRLSSGTARFIADRAALGRDALGKWLLGVVWTL-RDTCLIDLQRLRAL-----AANDKGRDIQQLLQEFARRGYIRDMVTRSDGLVIIRPGR-----------------------------------------------------
87 UniRef50_Q1MNR9 NA n=1 Tax=Lawsonia intrace... 114 6e-24 1 13.9% 21:287 131:450 --------------------PTSISRVSPFFPMNNKEKGRRDIIVKNLKASIQDKSkeLVSSGPWGEIIYTGPKLSIE-EEDALMALLAIIEMGkpLSFTYRGPVLPILRLMG--HKRPGANHYEKLITSLKSLALGSMQLFVREKGEDLQYDLsiISNLRLRPKDREISVTVNPFFYQMYLANSLTWINITKRFQIRGS-IAKAMYRFCQSHRDNpfRGNIMTLALALNMDppLKETRRQIREAIAELVEKKVLESTSLLSRTNLVLL--NRTAEALPSKKRISSQ--------------------------------------
88 UniRef50_A0R862 Plasmid encoded RepA protei... 113 8e-24 1 15.4% 82:276 75:280 ---------------------------------------------------------------------------------LLLAWIVTEAVQTKSRTLTLGHSLSDFLKELGLSRQGGERGDITRLRQQMRRLFSCSIRCEYQDGKHDAGIGfsLWWHPQEEKQAGLWelTLSEKFYQEITA-APIPLDMRALKALKRSPMSLDLytFRNSYLKTPTVISWQQLQQQFGAenRTRAFREAFRDAMRKVLVVYPTAQVTDVDNGLMLNPSPTHVPR-------------------------------------------------
89 UniRef50_C1XVJ4 Plasmid replication initiat... 112 2e-23 1 16.6% 80:314 68:299 -------------------------------------------------------------------------------DNDVSLALITLYQEAgpEDGTIVTTAYRILSVIGWDT---SGHYYQALKESLDRLTTATFTASEAwgKKWTTVKFRYIDRLEYTSEDDKlkIKLAREIVESIRAKYLKPLDLEFLTSLDR-PLTRALYRLLDAQRVApfRTNIVEWAKAciVDQTPSRVRRTLEGAHAELVERGYLAAVEYQG----------RGPKQEVIYTFAKQATLP--------EEAREVVARLSRYGVS-----------
90 UniRef50_C4KBK1 Putative uncharacterized pr... 110 6e-23 1 11.3% 3:276 84:353 --QRDKALYLPVSRSDTVALPNVLLRSALW---------------SSANAAALFVTDQNVPTQGDASIRLTGRMMRG-YDRRVLAACLSCMPADQPlpNWICVSVWQLSQKLQVAFGR---NVHAAVLESLGRLDDAWLRVRLKGNddDDTRALVLSDNHSAQRGSDLVTFRIPAELAALFGPASWSAVSEAALHDHSGLPA--WLASYYSTHA-VPYPLSIVALRSWSGSVCDLREFRRRLKRALAQlvPEGFRVAAFELTDSHVTVYLARWQPR-------------------------------------------------
91 UniRef50_C5V6F2 Putative uncharacterized pr... 109 2e-22 1 15.5% 32:282 46:304 -------------------------------AVYREKRKELIANLPYRTtpGDMNARRIEYKGKFLEIFPSPTGLPTLRDLDILLYCESWidRDNDIYRVFQFEVEDFLEFSGRS---MGGDRDDRLIQALDRLAGSKITTNTIPFGQNYSTSFSYIPKYRlnGKIKTVTLKITYRIFYLIQND---IFDYYHPDFLRLSPIRRAIYMVAMCHKDELFslSFAKLHQMTGTTSPLRKLKQTLRDLMD-NPIPG--HSFEINEADETVTFTQRRDVDVEARYV-------------------------------------------
92 UniRef50_Q1J3K3 Plasmid replication initiat... 108 3e-22 1 16.1% 80:315 61:308 -------------------------------------------------------------------------------DTDISAALVNLYIDQgpADGSVTCTPYQLLQMAGLDT---SGRYYAALDESLKRLLTTNYFIAEGWRDHPrnVNFRYIDRLerLDASSVLKITLPQEIARSVRSGYLKPLDLSFMQTLKRPPT-RALYRLLDSQRRDpyEVGLMEWAEAciVTDRPSLAQRTLDAAHEELLEKGFLKSVEYLGRGKKKILHYTFGEAFIPPD------PLLVQSLAEIGITHTRALQLVREHGEAN----------
93 UniRef50_Q9RZI3 Putative uncharacterized pr... 106 1e-21 1 13.1% 21:317 38:345 --------------------PNNflNFARFGVISMHSRIDREVTSWKSEFTINGRTFRI------EAITPEGRPHGIDTDTLVAVETLFVAS-SCPEDNWVHTTAYEMRELMGLGN---NGDSYHRLRQSLRRLYLTSVIVGRKtrVTWDNVGVRFLEGIRYRDAEdtLSIRLGEQLAASIRNGVSQVLDGQLLHQLEQPP-ARALYRTLQAHRrdQLRVPLAEWRLATGLTtrTDLVRRALEAAHDELLANRYLEAVSIEGRGKKAYASYTFA-------ERGAADPALVVLLRHAGVTVSRATALAAQHPERVEE--------
94 UniRef50_C1D2L5 Putative Plasmid replicatio... 104 4e-21 1 16.8% 80:323 49:309 -------------------------------------------------------------------------------DGDIATAIMDLYVESgpDDGLLHTTAYQILKRAGLD---DSGRYYTNLKQTLYRLRTATYSASEAWRDHRrtVTFNYLQGLenLSRSSALRIRLAEPIVRSVRSQYTKPLDIEFLTSLDR-PLTRALYRLLDArpRMTYSVNLIDWAAAciIDQRSNKIRSTLQGAHDELIERQYLESVEYDGRGKKQV-ITYRFVEVGGRKAELDLQSSpeLVGHKVSISVARRL--MEEFG--EDHIRERLQ--
95 UniRef50_B1BD48 Putative uncharacterized pr... 103 8e-21 1 18.4% 79:323 115:393 ------------------------------------------------------------------------------YEYDVLLALFRILLRNhmINNTVNFTFRELAKEMGY--KNFGGTIKAKLDKAIERLCDTNisFGGLYNPITKEYIlqDYTAYQYVEDKDGILKlaSVTFHEFFLSngKGKFSNKKLRLSLKSDVAKRMYLILNKwnRHEMFITYEKLYERIPLDSsvSYRNKRIHQACDELIKNGYLEDIDRTSRGINFIF------KLSKKQLECSCDSLNDTNNndKYVSYGELLDGFKRFGLENEDIDKYFK--
96 UniRef50_Q53W40 Putative uncharacterized pr... 101 3e-20 1 13.6% 80:307 78:321 -------------------------------------------------------------------------------DNEVSLALIALynAGSPPDGTFTTTAYQILKLMGFDT---SGYYYRALKESLLRLTTATYVLSEAWRADGRwvSFRYIDKLEFtdRSSVIRITLAKEIVRSLQNRYTKPIDIEFMASLKR-PLSRALYRLLDAQRLSPErvGLMEWAAAciVHKRPDKVRRTLEPAHRELIERRYLRSVEYVGRGKNQTIVYVFGEEAGgpDAEAVNLLMAEGLSFTSAYSLARRYSL------------------
97 UniRef50_C1D1V8 Putative plasmid replicatio... 99 2e-19 1 12.6% 14:323 9:326 -------------PSDLRIFEMDLTRSGI-ISVQRDMPTELTSWVSDYSISGNHYRVEATARYGRP----------HGTDNDVMVALQSLFLRNgpEHNRVSLTANQLL---LQSYGRNTSKDYQNLRASLMRLAGTNWttDPKTRRTKGITTTNFMFTLEMedDSSHIIVKFADTFAQSIRLGFFQMLDVHLMQRL-GHTNARSLYRVIQGHRIQplDLRLADWMSACGLEtrLDNARRILDAAHRRLLDEDFLQDVELTGRGRNATL---HYAFQGVPEPSQVEQLMAHRVTRPVAETLAA--DYPERVTPAISVIEERLK--
98 UniRef50_C4XGA9 Putative uncharacterized pr... 99 2e-19 1 15.6% 25:281 42:275 ------------------------LASDLFAARTGSPRQSRQN-------------VPVAACWPGAAIAVSGEALDQD-DLDAFLGCLLLALRSPLRGSA-RFSLRDLARLIRPKARRFDVR---RLERSLWRLAACRL--NVEEAGGGYALQMRLLDAVLCDRRAGLCAVDVGPRVLAACGDPERMERLIAARAPLA-DGFARWLAGFL-SYGPAALRLDFAALRRLSgsRQPMAAFRVRAVAALQDFLDLGAIAAIESAGPDRLIV--TRPAARGEEPA--------------------------------------------
99 UniRef50_C9PL99 IncW-like replication prote... 98 3e-19 1 15.7% 81:278 101:325 --------------------------------------------------------------------------------LLVWVSTQAVRNKSRLDSGFIthSQRRFMEELGLGSTGGENGTIGPFREQMRRLFKTTISVSYTELNDESGYIchIWWSTKQPDQDSLwwVELSPKFFQLI-TDKPVPLDMRVLRLIKRSPMALDIytYRVSYLKRATIIPWSGLMEQMGSnaNVKSFKQRFKDGLKKVQQAWPELDATPTEKGLLLKPSAPQVPRQT-----------------------------------------------
100 UniRef50_A4JVF1 Putative uncharacterized pr... 98 3e-19 1 15.0% 11:290 183:463 ----------PFHSDTVRIMATDLNKTSLFHVASNNTARRFCRDEPLGRIGETVSAV------------YRGEELRHD-DELVLMQLM-QVARGKYPYEWFSIFSVPFFKGSRGVTRRASSKDIDSVMESLARMRGGYLVVKSRSNYITVNLIKDLAGSGSN------HHVQIDPALIILYSS----FTALDTDHLFKTSGVARQLLKYISTIpeDTRPIKITSLFELcaMSKKLSDFRRklPAGLDNLKEMNIIRSYKLDESTDKVVI--NRNPDASP--VRVLAGPSA-----------------------------------
101 UniRef50_B6AQX9 Replication protein C n=1 T... 98 4e-19 1 13.6% 45:309 37:323 --------------------------------------------LFHSVRGKNRPKVQIDHQLKDRTVRYLCWEVLGELEQSVFLAILELAARNGKpgKGVLTTYRELLMML---KKTDGKKNYLLLKDALERLSRVRVE----EVRGEAWVGGMNLISVVTDGEN--IGIGVNWRIAEILDGGRFVKIDRNENLSL-NSDIARIIHVRLSSwpPHSRTVGLDTLAEWvgTNSDSKRqrTRIRKALSELMQK--TKWKVDFRGETAVIERPDQSVLSVTPNPYLLSQKPVPSVTNHRTDCHAPVLDLQE----------------
102 UniRef50_Q30VH2 Putative uncharacterized pr... 98 6e-19 1 16.4% 21:245 42:248 --------------------PSALLASDLFQAVYARKRPV-------------VSRLPLASTDSARTMLYSGERLDQF-DLDVLLACMESSAHTGRrgTCVGMMTGGIARAMKRP---DDRATRRKTALSLQRMACGLLEVS----NGRLHYTLRIINRLLLDSTQDRCVVEFSPQVFAALRSLPDMRSFTRSRFALRARSLERWLHGMVYVSSEMCIPFdlGPLSGGcgSRTALHATVRQLCTA--------------------------------------------------------------------------------
103 UniRef50_C9M9S4 TrfA-related protein n=1 Ta... 97 6e-19 1 16.8% 2:138 74:191 -EPQLGKITLPKIAEGHCATPIQILRTSLFGLVRPGRRKVLQKTC---------------YKKNGCEVSYIGIELDQ-KDLDIWMGFMHFYREQADHNGCVSVSIYEFLKQLGLSN---SGSNHKILKESLKRLTSGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
104 UniRef50_C1A4Q4 Putative uncharacterized pr... 97 7e-19 1 16.3% 37:257 17:261 ------------------------------------DRSLEELPLFRLSDSADDVPVSFTTENgwRVIPAPGDRLPGTFDQDVYVELLHRYHEAgpADGAITFTLHAFLRSMGR---RADGRTYEQLRAALSRLERTTLeiGAYWSAQSAHADTSFTVLSTVSVQRRRvrVTLSGTLRANLAARHVVTISAARYHALS-SPVARRLYRIlrADGRLSWRIPLERLAEQLPLTQrpSHLQRVLQPAHEMLLSAGLVRD--------------------------------------------------------------------
105 UniRef50_Q9RYE9 Putative uncharacterized pr... 96 2e-18 1 15.3% 80:314 16:266 -------------------------------------------------------------------------------DNDVLLGLVNAVvqGMPQDDTVRLTTRELLQLSGI---TPSARAYRNLQASLRRLQHTAYDVTDSWYDgwRSVSFSLIVRLGAEDNttLLAIRLDDSLISNIRAGHILPLDFEMLARLS-QPLTRNLFRTLSFQRDQvfAVPLNTWATHLGmeMRLDTVMRALKPAHEELIAIGFLREVEYRGRGKTRMVHYTF-----ASTKSAAVDPEAIAVLARYGVSGGRALTLAQAYGSE-----------
106 UniRef50_C1D404 Putative plasmid replicatio... 96 2e-18 1 14.7% 80:324 55:320 -------------------------------------------------------------------------------DADVLLALQTVFFRAgpDSNAIELTAAQLLALSGHAR---NGKNYAFLRASLLRLSSVKwqFDEKKGRhgETTTTGIIAEMQVTdeTSPIRISFVPSFAASIRDGFFQILDGELMSRL-GQPQARSLYRVLQAHraGELVYKLSDWFGACGLEgrIDNAKRTLDQAHERLKTEGYLHTVEYQGRGRAGKITYTFSA---APEPELVDQLMERGVTRPVAETLAA--DHPQRVVPALKMVDERLGS-
107 UniRef50_Q1MXJ2 Putative uncharacterized pr... 94 8e-18 1 17.3% 48:267 4:236 -----------------------------------------------YDTKDWDDNSEFTYKTPFGSVSRFGPGLNIF-DEDTLIGLMHIARDKKLDGHPTKMPatSALELNRFLRRGVSEPELEATRASVSRLSKTTLQIYSSTTDVEG--DTKFFDYVGQRNVKGKFLVQFRPEVVKLF--EQYVVLDFDLRTAL--SDTGKAVHRFLCSINKNRFSIKLDDLATAISYSGRKTDFKNTlpSQLEMMQKKGFIVDYELQGTGRKI----------------------------------------------------------
108 UniRef50_Q39PQ4 Putative uncharacterized pr... 93 1e-17 1 14.5% 41:282 122:365 ----------------------------------------HRDPKTPYYRCDSGKYSLIITADPDHGIPytYPRL-----ITCWleIVRTNSRRIVLGKC----FSDFLRSIGV---GLDSRTRKQVEQQIKRLFSADIKLKYNSKESWQFQRCNVATKawWDTKNPD-QFTLDESffYAMALNAPFPIDLRALAALKQSPMALDIytLRMCHLAAPYPLSWPQLKSQFgeTSDLDNFRTKFKDALKKVRVVYPHAKLSVNAKELTLFPSPTHVQKAVKRVA-------------------------------------------
109 UniRef50_D0MKS8 Plasmid encoded RepA protei... 93 1e-17 1 15.4% 82:276 87:292 ---------------------------------------------------------------------------------LILLWITTEVVRTRNRTLKLGNSLSEFMHELGLVPTGGQWGTISRLRDQMNRLFRARISISSVGPGKSLMQDITPvqRLWWDPKRPEEPLLFDSEItdFYQmdRPVPVDVRVLKDLTRSPLAIDLytYRVSYLKHETAISWKQLQEQFGAesDTRAFARKARQVLKLIQVVWPSLRYATPKGRLVLYPCTPHVLK-------------------------------------------------
110 UniRef50_C6CR33 Replication C family protei... 93 1e-17 1 14.5% 25:266 17:272 ------------------------LAPGLFRAISPGQRRRDKLEV-------------IYRLDNGNQIEFSGPEPLGADDLRVLQGLVALasQGGKIGPVASGETREILRDLLQLRGIANQQDVLVVKSSLRKLAKEiwKVSVIAKVAGLRSGFRLLANYTNDALTDGLVVALNPLLTNAigNGRYTYIDLAEVRQLRNS-TARILHQRLCAwcGRSKPVGLDKLVSYasSAATDRKRQSRIRQALDELAELGWSISEHAKGRFTI-----------------------------------------------------------
111 UniRef50_Q1LJH8 Plasmid encoded RepA protei... 92 3e-17 1 14.9% 58:279 74:319 ---------------------------------------------------------RYTRRNGTLTVSItgAGLPysYPRLLLIWLTTEACRTKNRQLELGPSLSSFMAELGLMSTGGRWGTIPRLKDQMARLFSAAISATSTSGESTaaDDFDLWWSPHSPDQTTLWRSTVTLSEALFQqiDRPVPVDLRAVKLLKKSPMALDLytYRVSYLRRSTLIPWESMMLSLGTGYpkADFKRKFVQALRKVSTVYPALRASPNERGLLLQPSTTHIPRQSR----------------------------------------------
112 UniRef50_C5ANU2 Putative RepA replicase pro... 91 4e-17 1 17.3% 81:277 110:320 --------------------------------------------------------------------------------LLAWLG--TEAVRTKERQLVLGKSLSSFMDALGISSHTGGkgSITRVREMMKRLFASDMAidFATRKFSIADETALWWDPQAPDQAGLWqvTLSEKFFKEI-LESPVPIDLRALKALRQSPMAIDLytYRYFSLRAPTTVPWEALKLQFGSGASekKFRETVRRALLQVLEVYPAANVDPTKAGLHLVPSKTSVPRL------------------------------------------------
113 UniRef50_UPI00016AFE57 hypothetical protein Bpse38... 91 4e-17 1 14.7% 15:252 22:250 --------------NNNLVTAHALARSAIF---------STRFYRSHAERPLYRERTRLPSTSDIEVFQTAGHQLDQ-GDADVFYELLRRVFVSGNETCrvVFSRAELPRALERSAG---GKTRKLLDESLDRLYRAEFEFSVHGLLSGKSriLKMHQLDKTTAAGEDYDILLDVELARLFDGNQWTILRRSQRRLLDGKPLAKGLHALFSTWS-TPYPMLPETLLPLVGrgMQQSKWLDVLLPALAAVKLV-------------------------------------------------------------------------
114 UniRef50_A8A306 Plasmid encoded RepA protei... 91 4e-17 1 16.3% 81:252 80:278 --------------------------------------------------------------------------------LLVWISTQAIRNKSKLDKGIITesQRRFMEALGLRSSGGKNGSIVPLREQMRRLFKTTISIMLAEINEEDGYIchIWWSANYPERnsQSWVELSPKFFQLI-IDKPVPLDMRVLRLIKRSPMALDIytYRVSYLKRVTIIPWSGLMEQMGSnaDVKDFKRRFNDGLEKVQLA-------------------------------------------------------------------------
115 UniRef50_Q63WD6 Putative replication protei... 91 6e-17 1 13.0% 8:284 1:283 -------MTRTSPTHAKLAQPIVHA-PGLFHSLAPGERKRD--------------KLDVTHVAGDTTVRFVGFEPLDSTDLRVLQGLIALATAGLRNIRRlrFTLASLADMAGFDRGGFGCR---QMRASLQRLSNVTVLVDRPEFEG----AFRLVSGYRLDKHTGELVVSISpgTTAILGRQGYLRLNMDEVRRIHG-EVAHLIhrLHWVNQGDRRPVNMDTLCsgVRTGSALRKRRMAVRQALKELMDVGW--TVTEKYPGTYLIGRPRRASDQGELVTRA-----------------------------------------
116 UniRef50_Q332L1 Putative uncharacterized pr... 91 8e-17 1 12.2% 29:322 52:359 ----------------------------PFVAEYKGDRQTLMEYIWYTKENNQLIKRGIEVSGHGE----FGVPTLREYDVLVSLQRL-FLNEKTDHGRciNFTIYQLAKEMGY--KSPNSLVLNNLRRSIKILLATTVTGKYSGgyVEDEISFHLLESaeYEETENNELIEVNNKliKLSRFTYNQMINDYKLFYNKGLYlaRKLYHLawKGSNNFAWANINTLMEKIPmeNQEKYRKRYIKKALKILNDKKILKIKYDDQNKDLVYFIFND----SEETGFLLTKYNKFSEIR----------DAFYNLGFTLDEVDEYL---
117 UniRef50_B1A4L1 Plasmid replication-like pr... 91 8e-17 1 17.2% 8:304 1:326 -------MSRSKPAVYAKMDPAHLF-DGLFVPMNGVKrrRPRLLVGMRdaGDQSLLLAIAYQLGTDGLLISSSRTQGktSMDLwmGLKSENAPDKPIGAK-KTTLHSLLIDAGYNPNKGTAK----IKESLNRLANAQVR-EKAAGWDRRS---NLISTVFKD--SGETYVAANPRLTKAIFEGQHVKISLFERNQLT-SEVSKILHAWLCSNIRQGKsvKIDTlrNALNDdrRVSNKRAQLRDALAEieLKGLHMGYGWVVDQTSSGIVQVSRPKDLPMIEAGAAGYSAPSEVQSAQEADAAR---------------------
118 UniRef50_A4VG61 Putative uncharacterized pr... 89 2e-16 1 19.1% 88:265 35:215 ---------------------------------------------------------------------------------------LIAFAQPFPLGDPVLLNRKQLLRKIKRGAIGSS--QYEWLYRSMKRLREATLFLEALKPDggRMESFNILKSLSYDSETYRY--TLDPHWILMFGNREYSLIDWEKRLQIRRgdMAKTLQRLIATSSDRVQRYALERLRAQMAYGGRLRDFRDSLGRAVCELERLEIIARGCIQESSR------------------------------------------------------------
119 UniRef50_D0MKR3 Putative uncharacterized pr... 88 5e-16 1 13.2% 67:308 44:300 ------------------------------------------------------------------EFIIEAPRIAGEYAEQVFIALLyqREKGHDLPSCVTVNQSDLFNIMHWPS---TGRYSSRLKDSLDYYMSVKITTnyRQRRELRVLSTHVLAGYEIYTQGRRKRvwAPDFLAQIQEGDH--LYSNVNDYFSLSTPTSRRCFRLLQAlgGKPYVADLKHFAegMGSTRVFAHVARRLENALEELRAKKLGIGFITENPERIILARYPKDsfAELPDRIKNQLPPPRLPGLAGQYEQREQVSRL-----------------
120 UniRef50_C1D2K0 Putative plasmid replicatio... 88 6e-16 1 13.9% 32:305 5:298 -------------------------------PSRFDELNLSRLNLISAVDQAEVSEWDVTFEAHGRIVHVRCEALphGLDSDVTAALINLYIegEPEDGRFSVSATTLLKLCGWHN---TGKYHGILRVCLERLHTSSYSVSGGWRDHPKGRwfHFIESLDFSSSDgiIAGRLADVIVASIRSGYVKPLDTEFMLSLSR-PRTRALYRILDGARYDplEFNLIQWADQCKIPSTIpnIRRALASPHEELIKRGYLRAATLSGRGKDQRVRYEFVREFVAMDAVLARRF----RSYGVADGVARKL--------------------
121 UniRef50_C5B575 Putative uncharacterized pr... 87 9e-16 1 12.0% 35:300 2:262 ----------------------------------PAVPSTRGARAAQTYDRTFPKAIEAVTAKPMGDLNIADQKL---FDYLLWLA------HDALTSRPVhvAVRDVLQYLG------SGVRLADLEDSLRRLGNVNVEITYKNDGQEHTVFVHFLSADLCRAENGELRYAFDPILLTFlqPSVYAAINMMHVRSFRRIG-AKRLYelYVKRYHPVWQVPLDDLRRVCDVSdrFDNFRKklEPAVAEVNAigflEYKEVTAGDSRKVTHIRFEPRLKTKDELTQIRQGVALSGPRRARD-------------------------
122 UniRef50_A4XE01 Plasmid encoded RepA protei... 86 1e-15 1 16.7% 83:303 115:348 ----------------------------------------------------------------------------------ALIYLLSQAVTKRSRDVYLGRNFTEWMRRLGYQTVSYGPRGTANlrEQVDRLLACEWQIRWEGNEGGDNAfvKISNEYAGSLEKNGaeIRMSEAFY-SHLLDHAVPLNEVAIRELKGTPTALDLYTYLAYrsDRGQVISWDQLAKHLGNDADSKRFRQTVRETM-QLVSAVYPNADVDFSGRKVVL-RPSPApkLVGPHLRVIGAPALETAPRSSVPKMAR----------------------
123 UniRef50_UPI00016C4454 hypothetical protein GobsU_... 86 1e-15 1 15.4% 31:297 15:290 ------------------------------VADNQKTLEFTDTIEDSSTGKDVVRTLVITAADKFG--------LPTALDDELLLGLIKLSVEQGFTDPKVYFSRYELIKKLGW---RDESKSYRRIEDGLNRWTGVTLQYRKSweKSWVTETFHVLNSVTVYDRERIARRRmsDQVFQSFKAGYIKQLDFDFYKSLT-SAISKRMFRFLDkyNTGRWEFDLQVFaeHIGLSKNYSnlKRKLAPAISELETNGFLAPLSDDERFVRERCGKWRAVFVKAT---KKLAVLPRTDAEHD----------------------------
124 UniRef50_D1AS05 Putative uncharacterized pr... 84 5e-15 1 15.8% 77:266 82:295 ----------------------------------------------------------------------------HEFDERIFHGLMSLLRDQKY-NRKVYF-YYKLL--MEKSGIKYNGRTLKAVKESLNRLATTSYTFNnvTFEEAIKVSNNLSEYFYHHKIKELIEVTFDEKIFDNIISKGFLYFN-AADLQLIEYDIARSLYTMITKWRNKALYIKRYslASRIPLSWKKENINKSVkkAFDELKEKKLISGYHFEKNKKY-----------------------------------------------------------
125 UniRef50_D1UGN7 Putative uncharacterized pr... 84 9e-15 1 16.5% 15:250 123:341 --------------SGHGAVPTSFVRTAVFADTT--------------------VGLKIFAVLGMPEVAvrGEKPLNLTHLKVLIYLSSMvsYDAVLGANVTFNPRAVIKAVGWSNNNIS---LRRLYDALEALAATTIRIREynVEEAASLVGRRVTSLATPKRGKrwQVQILATLMNAMQ-RFHTFVDFRTLAVLPN-GAASHLYLLLKSEAIRETEWPVARLAEIAGLTSRSRnvKAKLTEALDVLV---------------------------------------------------------------------------
126 UniRef50_B9NXY2 RepA n=1 Tax=Rhodobacterace... 84 9e-15 1 15.6% 32:159 4:132 -------------------------------AILKDLIPSMEHPFYSLSKKPDLSVRRYEHDDKWVEItvKGQATIYDKDLLIYvqIMHKLNRGEKVDRRMRFNPRDLLIFVNRGT---SGRDYYAFCDALDRLMGTVIKTNISTAQEGDDVPVGKVEK----------------------------------------------------------------------------------------------------------------------------------------------------------------------
127 UniRef50_C5B2B1 Plasmid replication protein... 83 1e-14 1 13.0% 82:281 144:351 ---------------------------------------------------------------------------------LVLLHLCTEAVRQRSPTIEVADSLSGFMKAMGFAVTGGERGTIGAFKEQLNRLAACSMQLGL-WDGEGQASTLnfRQLELWRRGDDGLVWQRTVSFhdFYDSLIRHALPVDIRAARAFSGSARKLDLLFWtaLQRPLRLTWDNLHRQFGAeaSLRSFRQAFKADLAGLLEV-FPRLRIDLDEGGMLLHPADPGSLLVPPK--------------------------------------------
128 UniRef50_D1PMT8 Putative replication initia... 83 1e-14 1 17.9% 87:242 12:178 --------------------------------------------------------------------------------------MLHIFAMIKPSdpRYEMSIYEFLKLCGVDP--HNGSMYNQVKKNISDIASTPVQWIRIEGTQKIT-MFRWIDGSTIDKRTGKITLTLSPFLkhLIQLKEFYTTMDVTYIMLMKSQYSVRIYELCKSYqgKPLVWDIDNLRKQvcSATNWAHIRRTV-----------------------------------------------------------------------------------
129 UniRef50_Q1QGT1 Putative uncharacterized pr... 83 2e-14 1 15.7% 18:247 93:361 -----------------RAVAPDDAQRDFFIpaLKDDVHLMEMTPFTLDRRKEVRTELVYTTRQGVTIRVksLPTIDDYDlqTWLADLANQYRSQlpPRMFDISISEVVK---FKRRKWGGAISEDILGSLDRLWNAEVVVDPMKGTKYRGGKFRLVGSAynTGAATRIRVAVPDWIYAGIVERapMLKTFNRDYMILSQPLHRALYRFLskVPKdpYSLSLVELAERFQAKQQQKYFNRDLKKAVA------------------------------------------------------------------------------
130 UniRef50_Q8GN72 Replicase n=1 Tax=Bifidobac... 82 3e-14 1 13.0% 104:319 96:314 -------------------------------------------------------------------------------------------------------SFRDFLKMLNVP---VGGRQLRTIKPQLENYFATAIAISNNTSRETEMAGFTIATKVHIEWLDDKawVRFSQEYID-YLKDKPVPVDLPTVAKLS-SPMALDIyrYYKMH--DRVDITWKQLYDQFGSDSEMKKFKQNFKKAVDSVLAV-YPQARITCGRN---YVTLWPSEVSVPTVSQVRRVEKSAEQRREAEEGHWTSVAGYGDVFTTTELFD------
131 UniRef50_C8CH58 RepA n=1 Tax=Burkholderia p... 81 7e-14 1 14.8% 73:301 126:336 ------------------------------------------------------------------------PRLGM-----AWVS--TYAVRNKEREVPIGDSAAEFLRLMGMD---DQGGNYKALRLQMHAMAACRMQLGFKGRTYNGQPVQQF-DAWVSNKETKQRALwvLSEDYYGSLIASAVPLDNRALHHLKGSALAlwLAHRLHRIQGKGLMLHWKALREQFayTGPnkNFKDSFLPALKKVLTV-------------------YPQARVKPVNGGVLLIGSPPPIAYKGGPTV------------------------
132 UniRef50_Q2RMM0 Plasmid encoded RepA protei... 79 3e-13 1 14.4% 82:275 97:301 ---------------------------------------------------------------------------------MILLYLQTEAIKTNSPEVELGSSMAAWMTRMGVS---VGGKSYRLIDEQATRLSLCSLTFFWDEKRGEAFRNSTFVEGGLCLTELGeeTARLSDDFFRSLQ-NHAVPVLEAAVRALANRSLALDIYVwyRLHVLNKapVSWPALRGQFGakAPMSQFRRTFLESLR-LALAAYPEAKVSVDGATGITLHPSRPP--------------------------------------------------
133 UniRef50_A8C9U4 Plasmid replication protein... 77 1e-12 1 16.0% 101:250 92:247 ----------------------------------------------------------------------------------------------------LGTTFREFLRLLNIE---IGGRQLKTIKPQLDNLFRCAYTISNDTDSTSNGVAFTVATRWQIDWLRNenWVQFSQEYIDYLR-DSPVPVDLSIVAKL-NSPMSLDVYWWlySYLHERQSITWQQLYSQFGSTNILPAFKQSFRKAVYDVE---------------------------------------------------------------------------
134 UniRef50_Q52874 RepA protein n=1 Tax=Rhodot... 74 8e-12 1 14.0% 82:288 78:305 ---------------------------------------------------------------------------------LLLAWMCTEAVKTRSRKLYLGASLSEFMDKLGLVPSGGRWGTIPRLRDQAKRLFFSRWFVdmEAKGWRAWWDLGfrSTLLWDVKdeHSYVELTQEFFEAVLLR-PVPLDARALRALKQSPLALDLYAWLssYAQKDLAVTWQQLHAQFGAdeNVDEFARKVKQAIAKIHLlpDLRVQYPKGRLVLKATTQVHVPRAIGSNDKGSASR-------------------------------------
135 UniRef50_UPI0001C42A69 hypothetical protein BpOF4_... 71 5e-11 1 15.1% 31:262 107:334 ------------------------------APIFSVTNRSARALVKLQNKNGEI----VESRKGYRKIEYYGKNDLTTMDFKVFAGLQ-KLWDVKGHNKKFSLKFAELCEVLDLA---LEGGNYKLVGDSIFKLSTTSIVMEDYNDPLLKKSItnLIQSAEINRDLNSADIVFNDYLQSGLELGNRIDLD-ALIFNDLGSLTTKLLYPLLSSLLTETKTLDLDKIIQSLNIQNKERKAvkQLRESFDDLKNKDLIEEYTFIK---------------------------------------------------------------
136 UniRef50_Q7X181 Lfe211p1 (Fragment) n=1 Tax... 71 5e-11 1 14.9% 101:254 27:183 ----------------------------------------------------------------------------------------------------ITIDPYEIWKKVG-----DTSSNLEYLYELLEDMRLAKVTIRYKDGGDSLGGIVSVIDrgGCVLERYLWQVTISPPWMKLYDTEIKVRCKPALALILrrSGYSQAMARLFLTHKQN-MTMKFFDVLNALGIEREARQVRRDVKPDLDLLAQIGI-----------------------------------------------------------------------
137 UniRef50_Q47035 Rep protein (Fragment) n=2 ... 67 7e-10 1 98.5% 261:325 2:66 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QRGRTKFFCIHYRRPRLKAPNDESKENPLPPSSAEKVSPEMAEKLALLEKLGITLDDLEKLFKSR
138 UniRef50_O46329 Plasmid Gle4293, complete s... 64 7e-09 1 15.5% 79:246 197:379 ------------------------------------------------------------------------------FDLTVLIAILYQYNHLLVRSDIFKINVASVLNVIGYDT----GYSRKKFLNSLKKLSTTtiKFDSDNTKVTEDYFYSflLSFENLSTTklVNVQLSIPLIRIfsNNYYALVNWQSFVNLPNTKL--RLFYFYFGLNVkeFFVkvNKLYHGSATSSNSRVYTKDIRQML-------------------------------------------------------------------------------
139 UniRef50_Q5HXY9 Plasmid replication protein... 64 9e-09 1 16.1% 104:246 160:311 -------------------------------------------------------------------------------------------------------SPASLLKRMGLSRG---GPISKKLVEQIERLATCTVDFKFGNDREGVVVNERLVESFRYVGE-------VDPRTKRNTRMIETVVLSEAFYRELRRHPiyLWLAFRLHALQGDT-PVGWGSLWKQFGTekTLKSFKAEFKEPL-------------------------------------------------------------------------------
140 UniRef50_D2Q9V8 Replicase n=2 Tax=Bifidobac... 63 1e-08 1 17.8% 172:300 2:138 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLSSEYVDMLR-DNPVPVDLKVISALK-KPMAIDIYWWLTknLHEPATISWQQLYQQFGSDSELKNFKRKFKRALGDVLevGPQRVTVFPSQTSVPTVAQTRSAEKQARLERVRDSRSASVKAADPEDT-------------------------
141 UniRef50_C6BQ37 Plasmid encoded RepA protei... 89 3e-16 1 12.8% 82:276 123:331 ---------------------------------------------------------------------------------LILAWIATEVAKTGDRELVLGNSLSEFMSNIGRDtsGGSRGNLTLMRNQMQRLFAANIAVTSDPDAvwQTDGFRIVDNANIedQGSLwrLRLTERFHETLS-KSPVPVDLRIVKALSRSAMAIDIytYRYAIMDKSTKIPWEALMLQFGSESSPHKFKENFLKNLRDVKEVYRDAKLDYDKSGILLLPSRPSVPK-------------------------------------------------
142 UniRef50_Q83YK3 RepB n=3 Tax=Bifidobacteriu... 86 1e-15 1 19.4% 101:275 96:275 ----------------------------------------------------------------------------------------------------LGTTFREFLRMI---DVQVGGRQLKSIKPQLERLFACSYHISNNTENETNMRNFVVAEKSRIDWLRNenWVQLSQGYVDMLR-DHPVPVDLKVIARL-RKPMAIDVYWWLTknLHEPVTIAWQQLYQQFGSDSELKEFKRKFKLAVAEVVEV-YPCRLTLGPQRVTVFPNRTSVP--------------------------------------------------
143 UniRef50_A1RQE5 Plasmid encoded RepA protei... 78 4e-13 1 12.9% 82:275 107:316 ---------------------------------------------------------------------------------LVMAYLNTQALRSKSPEIDVGNSASAFLKQLGKESSGGKNGSYTNFRKQLLALSACSITLGFSTADKAFTYDGkwIGNSDNQGQGALwvITFSHEYFTTLS-EHAVPLDLRALNQLNSSALAMDIYAMLsrISGRPVVLYWRNLREQFGQedADRNFKKVFLPALKRVLTVYPDAKVKKVTGGILMMSSPPPIP--------------------------------------------------
144 UniRef50_A1A2T9 Replicase n=1 Tax=Bifidobac... 76 1e-12 1 13.6% 57:292 45:305 --------------------------------------------------------RKIVKRNGNVEVTFTALGECMPynLDAIVATLILTNDSSWDTsvIGKSFYEFAE--HRLGITRGGNQYRRLRNQFNYWLRTAYTITNLGEDqaEAWHVPWVDAEEwhPEDKECWIQFSEMFVKKVVKENPVPVDFRVLREliKSPLSLDIYLWlmSYLRQPSLVTWEQLRGQFGSsqTMKKFKQTFKAALVHVRDadGLDLTVSDSNGVTLFPSSTHVPTLAETRKKERNEEFARR---------------------------------
145 UniRef50_C6HZD5 Putative uncharacterized pr... 74 7e-12 1 10.3% 42:275 103:343 -----------------------------------------EFPFFKLDRKKDLSVRIFEYKDIKIELIPSVLGHPTAWDEPLYLFAVreFGKTGRVPEWVEFHVLDYLRWIEKADKEITGERARAIEGGLKRMKGLQVVSTIKYGTEQKLVQggIITGWKFGKrsGMAAIRLADWTRIHIQSNRIIHLPED---FFCLPPIERKIYQILHKhrQKQFIIGIENLRTKSGYERDLRRFRYDIKGIIPSCLDIG-VEFLEYGNIRVKRIQTKNEKP--------------------------------------------------
146 UniRef50_D2LJV7 Plasmid encoded RepA protei... 73 1e-11 1 12.4% 82:251 131:310 ---------------------------------------------------------------------------------LILMHLCSEAIRQKSPTIEIADTLTGFVRDMGFPKSGGKKGPLTAFKEQLNALAACTMKLTVWNGERVRTRSITPIDepTHPDQRSLwtVTFSPAMYESLQ-KHALPINTHVVRAFAGSARKLDLYFwyRIHneEPVTISWEALKDQFGSgkRDRDFRANLARELNEIKE--------------------------------------------------------------------------
147 UniRef50_C7JI89 Plasmid replication initiat... 70 1e-10 1 11.9% 82:275 98:298 ---------------------------------------------------------------------------------LILLYLQTQAVRNKSRQIELGASMNAWLSAMNLS---IGGKTYNLVREQSRRISRCRLTFFRSDAGNQYVSNGAFVRDasNSDQQSLwvVTLDESFYNSL-IQHPLPLREVAIRQISGRSMAIDLYIwyRLhlPGPVKVSWAALKSQFGPDYrlRFFRRDIIPSL-NLALSVYPEAVVTIDDRQGLTLFPSPAP--------------------------------------------------
148 UniRef50_B8F0E5 Plasmid encoded RepA protei... 69 2e-10 1 12.3% 82:244 153:326 ---------------------------------------------------------------------------------LVLAWLNTQAVRTRSPIIPVGDSATEFLRMLGKETTGGRNGTLTSFKKQIQALAACHMTLGFNAAGRAYTYNGQPVRQFerDSQQRPLwvTFSDDYFQSL-MDHAVPQDVRAMYALKGSALAMDIyeRLHRISGRPVTLHWKSLREQFGQEYRGAEADKDFKK---------------------------------------------------------------------------------
149 UniRef50_B1M9Q1 Plasmid encoded RepA protei... 69 2e-10 1 12.4% 82:275 196:403 ---------------------------------------------------------------------------------LLLTWVCSEAVRTKEPVLSLGTSLASYLRELGLKNTGGKRGDITRLKHAMTTMFSAIISCRYEGRESWALQNVLLADRVEwrDEAGEwrLLLSRPFFQEC-VDHPVPINMIAMKALRHSPLALDIYVWlmSYLSKRTTIPWISLSAQFGADYalRDFRRAFLRELKHVLTIYNTAKVSNSDNGLVLYPSPTHVP--------------------------------------------------
150 UniRef50_A1W4A5 Plasmid encoded RepA protei... 67 6e-10 1 15.5% 82:275 84:284 ---------------------------------------------------------------------------------LALIWISTIARRSNSREIFLGRSAAEFLGMLGFDQ---QGRRYCTLRQQLHALAACRIQLGFRGRTINESVIKrwLPSAHNQRATWPGTLVLETEFFDEL-VQHSVPLDARALHVLRGSALAiwLAHRLYRLNHRPLWLPWHTLKDQFGHEYVGKhfCTSFKTALDKVLMVYPTARACIQRGGIELRQSPPPVP--------------------------------------------------
151 UniRef50_C7HYV3 Putative replication protei... 67 9e-10 1 15.9% 101:314 93:304 ----------------------------------------------------------------------------------------------------LQTTLAAICREIGRDPN--DGRAHAAIRKSIKRLQGFVIEARSGD----RLATTHLidTAGRSKGAGAVSVALSYRLARaiGEGSYGRVRMGEWREL--SPTAQCLYHFLACWrgQCPTIGLDTIARHvaTGAVLRDRRRMLRAALSELPREEWEISEAEADRSMVRIERKNIDPQPEPVFSPTPTRVSAHAPHS----EKPARISLPHERGRE-----------
152 UniRef50_B3EBU8 Plasmid encoded RepA protei... 67 9e-10 1 10.3% 38:280 124:369 -------------------------------------RGTNGLPVTEYSKTNGRATLTIMTPSIYGGIPF-GVVPRQ-----LLMWLTTEAVRTKQKEIFLGDSLTAFMKDIGIAVTGGKEGSLTRFKKQSDRLFNSFiaTNAPRSNLKITSSNKSFSFWKTDGKPteSHIVLDTEFYESL-IQNPVPIDKRAIRALSGNAFALDLytWRMYSVRKYTKIPWEYLQLQFGAnkDLRFFRRRFAEVLNQVLAV-YPASVSVEKDCLILQPSSTSIRKITPR---------------------------------------------
153 UniRef50_Q84GE3 RepA n=1 Tax=Corynebacteriu... 66 1e-09 1 11.2% 81:276 83:300 --------------------------------------------------------------------------------IMCWLTREALRRQNLPIDepLNSSLSGFMREVGIGRATGGErtITALKKQMRSLFSTSIGIDIKGDDDLKLLDL---DESVIAERTEMWwiRLSATFYSDL-IKSAVPLDTRILRSLKKSPMAIDVytYRVSYLRYPTVIKWDQIQGQLGAGYpmRNFRKKFLIALNKVIDVWPTDSISIVKNGILLTPGSPSVPR-------------------------------------------------
154 UniRef50_Q1LB00 Plasmid encoded RepA protei... 63 1e-08 1 12.3% 82:276 135:361 ---------------------------------------------------------------------------------LAWIgiMAKKKRGEFTgrRISlsLSEFMYNLGIPMATGGKRGTMTlrQQMIRLFSATIAisIDRVGYLLADQLSTWWDPMQPGQGSMFevVLSEPFFNEL-VNRPVPVDMRALKALKQSPFALDVYSWLTYriQRRTEIPWEALQMQFGTEtsERKFRALFRKALKDVLVVYPGAKVDADSSKALILQPSRTSVR-------------------------------------------------
155 UniRef50_Q63PV2 Putative plasmid replicatio... 63 1e-08 1 13.5% 82:273 99:305 ---------------------------------------------------------------------------------LISAWLTREVKRTKSRELTLGRSLNEFAGKLGLSNSGGRRGDTTRLKIQATKLFSTFVTLKANRGNdsLSDSGMLLWNPNKPHEQSMWevTLSEAFYREC-MDIAVPFDLRVLHAL-RAPLAIDLYLWLTwlRGRARIIPWEALRMQFGAGYAlaHFRAEFNRCLKDVCTLYPAAKVSSGRDGLSLFPSPPH----------------------------------------------------
156 UniRef50_C5T1J6 Putative uncharacterized pr... 58 4e-07 1 14.4% 101:274 161:339 ----------------------------------------------------------------------------------------------------VEVTIPSLARGIGM---TATGPNTEVVRNSVRRLLRTTCEASLYYAGSGSHWGttLLSAVLTGKAPARLFVFLNPELSAGCLSRSGVniNMREQRLLQSKP-ARRLHAWLSAWagEVRKIKLETLLPHvcTASAKKSRIRTLKEAVQAI--AGLPGWVCWLNDADRMVRVRKPR---------------------------------------------------
157 UniRef50_A0P4E7 Replication protein A n=1 T... 58 4e-07 1 11.6% 12:252 80:325 -----------LSTDNLRYMPTPLAICGLPYKALPDGETEFERKQGRMAVTVTAGKLRSPDGQRVQQPIPYGPKAR-----LIMAHLSTEALRNNSPIVETSETLSGFMRDMGFEPRGGRNGNIEPFKEQLRALAACRMEISTWDGKRSGQVDVKPLNKveNANQKSLwtIAFSEDFYRELK-NHALPIDVRVLRALSNS--ARRLDLMLwtRLQTKLVLDWKPLKSQFGEgtRDRAFKAAMIDDVAALKEI-------------------------------------------------------------------------
158 UniRef50_Q6I6A6 RepA protein n=4 Tax=root R... 58 5e-07 1 14.9% 52:292 48:323 ---------------------------------------------------TDPKTSYFERTNGIVTLSIMGKPssMPRTLLAW--ICTEAVRTKDPVLNLGRSQSEFLQRLGMHT---DGRYTATLRNQAQRLFSSMISLAGEQggIENVVIAklFWNPKRPEDRALwtLTLTGDFFEEV-TRSPVPIRIDYLHALRQSPLAMDIYtlLRAKGRPFVQIPWVALQAQFGSsaALASFKYNFKKRLREV-LIVYPEASDCIEDDGECLRIKSTRLHVTRAPGKGARIGPPPT---------------------------------
159 UniRef50_B9BC29 Replication protein n=3 Tax... 57 7e-07 1 14.1% 82:230 115:267 ---------------------------------------------------------------------------------LALAWVSTYAKRHKTREIPIGDSAAEFLRLVGMDS---QGNRYATLRKQMHALAACRLQLGYKGRTFNGQPVEQF-DAWLGNRDARQRSLwlSESYFQELMEKG-VPLDNRALMALKGSALAlwLAYRLHQIQGRPPIVHWRSLREQFG-----------------------------------------------------------------------------------------------
160 UniRef50_Q9FB52 RepA n=3 Tax=Corynebacteriu... 56 2e-06 1 15.4% 123:284 137:315 --------------------------------------------------------------------------------------------------------------------------NLKNIREQLLRIAGSFITVQSDDGVHARGRNTQILEDwwFDPRDpeSELVLTPQFFKHIA-EAPIPIDLNVLREL-NKPRSMDIyyWLAKNNREAYTFTWDMIAANFasTTQMRDFRRRTKEAIEEVSKVWPNSGIEANTDGVTVT-RTAPSVHQKPPRPEL-----------------------------------------
161 UniRef50_B1F975 Plasmid replication initiat... 55 3e-06 1 16.4% 94:307 38:266 ---------------------------------------------------------------------------------------------GRKLSNVLLLNAYdlLKkvGIMSegFDSKNTTALKEALKKISTTPIEFDihAAGDEEWGVTTLLSSANI--RNGIVTYEYSSTLakLANPEIYLLININVQKQFSG-AYALALYelRFKRTGSTGWISVDIWRKLLGAEAsfKHFNSeiKKAVKEVNTVSNILITPEYERQNRRVAKIRFLVEDNPQRSMYDESDSEEQAAIRDSETYRRLVKL------------------
162 UniRef50_Q93MJ1 RepW n=1 Tax=Corynebacteriu... 54 7e-06 1 17.5% 22:244 21:253 ---------------------NRIFVQALF-PYRKSD-------EYRRAITQGSKEVIISSPNGLPYGKY--PRLIMAYIITTAVARAHQVEQGLMDSdpLGESLNEFFRRIGVVARGTGggTVTRIREQLVRLASSSIVVRSRIKKGrnHPIAGEWEPWFDADNPDQAAIQLTDRFFQLIA-DAPIPIDLDILHKL-GKPRAMDIYVwlNYQNRPSFTFSWKQmhQFSPKELTTWAQRANFRK---------------------------------------------------------------------------------
163 UniRef50_B9TQS5 Putative uncharacterized pr... 54 8e-06 1 13.3% 131:273 1:168 ----------------------------------------------------------------------------------------------------------------------------------MKRLFGSLVTAQYTGSSEGKGFTVRNvdEFELDEeaGAWrvRLSNNFYKEC-IDRPVPVDLRAYKALRGSPLAMDVYIwyRMScrRTRPIRWEALMAQFgsDQAARDFKKGFLKALKLVQLVYPSARVLLVDNGLVLLPSPPH----------------------------------------------------
164 UniRef50_A1K753 Protein kinase n=1 Tax=Azoa... 54 1e-05 1 13.8% 165:273 29:147 --------------------------------------------------------------------------------------------------------------------------------------------------------------------EAGRWqvRLSHGFFREC-IENPVPIDLRAYKALRGSPLatWlyRMSYTH-RRSRPIRWEPLMMQFgtGQAVRDFRKAFLKALK-LVLVVYPQAQIEVGDTGLLLLPSRH----------------------------------------------------
165 UniRef50_Q6QW75 Plasmid replication protein... 53 1e-05 1 7.7% 82:275 102:303 ---------------------------------------------------------------------------------MILLYLQTRALQTDSREVELGRSMHDWLDRMGLS---VGGQTYRDIREQASRIAACNLTFAWEDANSLGFEKDSIvsSEHNSPQGTLWevLLSEAFFRELKA-HPVPIWEPALRHIQNNSTSIDIYIwyRLHstKSTTITWPAVFEQFGAgsRLRDFRKRFIEALQLAIAVYPEARVDVEDHGLLLHPSPPPIP--------------------------------------------------
166 UniRef50_Q7WZM5 Putative replication protei... 52 3e-05 1 13.7% 83:272 106:310 ----------------------------------------------------------------------------------LLAWICTEAVRTQNKQLDLGRSQAEFLKRIGLHS---NGSDIARFRKQAMSLFRSVISIEYEDDDLSEnlPISTSEKVFWHHNPDVQSLWVsdEFFREV-TERPVPMDLRVFHSISKSPLAMDIYTWLtrHSRKpvKIPWLGLKGQIGSNYavRSFRYYFLKRLDEV-LVFYPEARGHITDDRDNLVLTP-----------------------------------------------------
167 UniRef50_Q97TD7 Replication protein, repA n... 52 4e-05 1 12.1% 118:323 56:264 ---------------------------------------------------------------------------------------------------------------------SGSTNVYRDIKKATKDLFTKHNKFIIKDKTAGKEFYFTWFSMLNYNDKDGSIYFEIGETLKAAL-LEMKKRIYYELQYTLnrSIYSKRIYYMLKSFSDTGWRIdiDELQYKLNCPPSYKNynKVLVQAQKEINGSDISFDFTPIKTGKKVTGIKFLIKDSNTVKVKNEVAVTGATQSENDEATKVQKI--FKNHKITNKEAESILK--
168 UniRef50_B2JUN4 Initiator RepB protein n=1 ... 51 6e-05 1 15.4% 87:255 39:207 --------------------------------------------------------------------------------------LLHSY-DNLLTTRTHRLPVRTLMLVLGW----TESENTEKLREALRQLATTAVEFNVMDDGRERWSVMPILSFAEI--RTGVCSYRYDEALAelYDPSIYATVNLGVQRKFSKSH-ALTLYelRFQKVGSTGWIELPVLRKLLGATQeyDDFRrvIQKAVKEINDVSDI----------------------------------------------------------------------
169 UniRef50_A7H3G1 Putative uncharacterized pr... 51 7e-05 1 14.6% 26:251 28:238 -------------------------RLPVFAPIKRYTPSSAIYKDFLKNKRTRTINTQ------WGNVTIRGSLLTQIhdLIILNNTKIQILKDQRIS--VDFCISNVLKSYG-----DAGFNYKWFKNILEDIMGAVIKIKLENQTE---FYFHIISAMGYNEKGDFGGIILSKEYLDFYQ--KTIAINYNKEIqlIENSLIKSIIRFFLSH--NQINITLENLLIALGLEINTKN--RYFRKIKQEIKE--------------------------------------------------------------------------
170 UniRef50_B2UKE3 Initiator RepB protein n=2 ... 50 9e-05 1 16.1% 100:273 64:241 ---------------------------------------------------------------------------------------------------RVRLSAAEYAEAFGVDANT----AYEQLQGASDSLFNRYVRTVRETRRGPEEFKFRWVGSAKYHKGEGWIevWFQEVVPHLFGLreFTTYKLRQAAAL-RSVYAWRLFECFKSWAATgyTPTIEEFHRAmaSESQRKNfrRVIEPAVKELREkgLHIEWEPETAGRKVVKLDFR----------------------------------------------------
171 UniRef50_Q46146 RepA n=3 Tax=root RepID=Q46... 50 1e-04 1 15.8% 82:239 25:185 ---------------------------------------------------------------------------------RIMLGCITQVRRDQPLTDEvsVSVADYAALVG----TDSHSTYKELADAALRLKRREVWLREYPNGQgkTLVTSWVQSIAYVESEGRVELRFTKDmyLTQLTEQFTRYALE-DVAKMTSGHAMRLYELLCQWRGAGErvPVAWLREAFQLDGKYPAIK--------------------------------------------------------------------------------------
172 UniRef50_D0V0D3 RepA n=1 Tax=Moraxella bovi... 50 1e-04 1 14.7% 66:323 10:280 -----------------------------------------------------------------NDLVVAGYELTANEQRLILTAIAKISPTQLDPNTGYEITAKEFSKRFNIHPKT----AYRELREAASRLYERSIVIKTKEQTLKARWADMIieDVMKDEDWKRVVIWFSPQVIPFLIneNFTKYKLSEIAEFSSS-YSFRIYEFMMQFQSTGykISIKDLRERLQLGDKYPASKdvIETAVKEINEKsyKVDYNLIKTGKKFTHLELRFKQKEKPKPLDQKDpiFDNLTDKERDIIAQKNAYADQIGATAEHRENLIR--
173 UniRef50_A1BC50 Initiator RepB protein n=1 ... 49 2e-04 1 11.3% 79:273 36:232 ------------------------------------------------------------------------------NDRRIYNQLLENAWEAIDKPVT-----HVIAKSALRGSHNSN----DRVGESLERLMSAIVKVAVIWDGEPAIERVQLLGGNLESGRSdlLEYEIPARLRKIIRNSQVFARLQREVMFALSSKYALTLYEMVQKRGNLRwrFTLEALRGIMGVpsSWSNLkrAIDPAVAEvaLSDYMVEISPIKTGRAVTHVEMR----------------------------------------------------
174 UniRef50_D2U1L9 Phage transcriptional regul... 49 2e-04 1 14.9% 97:271 13:188 ------------------------------------------------------------------------------------------------PERTFQITANEF--YMSFPDMGRKHAER-RLQEAIDRLAERWIRIYWKDNKEEIRWIQR---KAKYFTGEGKIEISFSDYIIPYllHDQFTKIVVKNVSKLK-STYSIRVYELLmkAIGDR-VIKIDDFRSMLGLDDKYSDfrAVIKPSLKEINAKSDivSIDLVKQGRKVVALH------------------------------------------------------
175 UniRef50_C0VLN3 Replication protein n=6 Tax... 48 4e-04 1 13.2% 82:270 41:229 ---------------------------------------------------------------------------------RIVLAAISRIPKNQPidDELYPVSVDELKQLGVHEKT----AYRDLKEGINRLYERSINLSIDD----KSIKMRWVQEIQFLDSQSVIGIRFSKPILPFISNLSREFTKYAldIAGINSGYGIRIYELLVQYRQIGKriSVESLRTMLELGKKYPLfkRVIDTAIDQINEYSPLktYEQKKTGRKVTHI-------------------------------------------------------
176 UniRef50_UPI00016C5BA2 putative replication protei... 47 7e-04 1 16.3% 82:253 26:211 ---------------------------------------------------------------------------------KLFYKILFNAQKQQNSSYVTTISKEELKVFM----KNNNDYEHKNIKEILNMFQQSVLEFDyeTTGKLKTFGSGLINTYELDHTDQIYTIMMHEVLYNHITdnGYTAINLSVLFNFRG-AYTQRLYTLFRLWSReeIKYKLDELRFYLKLKDNvkYFKQnlKRAMNEINKKG------------------------------------------------------------------------
177 UniRef50_Q8GN68 RepB n=6 Tax=Bifidobacteriu... 47 8e-04 1 11.4% 81:299 25:250 --------------------------------------------------------------------------------LDVLMAIASRVREKG--TATVEFSFEELRGLMRLRKNLTNKQLADKIVQTNARL----LALNYMFEDSGKIIQFALFTKFVTDPQEATLAVGVNEEFAFLLNdsQFTRFELAEFADLKSK-YAKEFYRRAKQYRSSgwKISRDEFCRLLSVPKSTAEqkRVLKPIIEelLGLKIERQYVKRRLSGFVFTFARETpdARPVEARKAEDAGHWTSVAGYGE--------------------------
178 UniRef50_Q2VZZ5 Putative uncharacterized pr... 47 9e-04 1 16.7% 171:296 49:179 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVLGEAFFRAITSN-PVPVDRRALKALRRSPLALDLYAWayELGSEGAFIPWSGLRRQIGAasDPKNFQKAAKQALRKVASVYlfRYSCELGGIRILLGSTTAVPSNKSGKSSHIHGETVPRPTAA-----------------------------
179 UniRef50_B7UYC9 RepA n=2 Tax=root RepID=B7U... 47 0.001 1 14.1% 82:251 102:291 ---------------------------------------------------------------------------------LLLAWMCTEARRTSSPELNLGRNQNEFLKKLQLPS---DGRYIKALHAQTVALIRSQLSVEVSKTSVLAFESIQIAKnfWNPKKPDEetLTLGSDFYDAI-TKAPVPLKMEALQALRQSPLAMDIYTWlrSGRNKEAKIPWVGLKCQFgtPQGVRSFKANFLKQLRGVLL--------------------------------------------------------------------------
180 UniRef50_O69393 Replication protein n=1 Tax... 46 0.002 1 16.9% 82:312 8:260 ---------------------------------------------------------------------------------LLFIAIAQVVHDDKDF-KTYTTTVPELATFMEIDENSL----YRDLEGICTSLCSQVVKigENAKKGKKWKIFHWVSSAMYD--NGKLTLRLSDDI-------KPYLLELEAHYAQprSYYATRLYQYLLADIGaeWNFTCEQLRDLFqyPRNYDLVRFTIKPALEELGASDFAYVWDYEEHRAKTRGRPLQSVSFKAILFENKEKKDFYLkaAQYNAERSAAIATQEPAG-------------
181 UniRef50_D1XZR3 Initiator RepB protein n=2 ... 46 0.002 1 14.6% 122:272 85:234 -------------------------------------------------------------------------------------------------------------------------RTYKTVR-SLA--QKAIVQFHENEDKQLVVDYFHWIDAFRWNTSTNDYTVRVSPELYDYVInkSFTVLNLHT-AILLESKYSQKFYEICCLYSGDFRYIDPTMlyKKRVLKMSVETFRFTF--GLSELHDPKTGELLEKEKYQRFKTMVEK-----------------------------------------------------
182 UniRef50_B5A7F5 RepA n=2 Tax=Bacteroides Re... 45 0.003 1 13.0% 92:253 52:211 -------------------------------------------------------------------------------------------RRDLFDDLIITIHEEE-LKKCGDNTKM------QNIYDALKRLRNRDIEINNEKM----WLSIGFVNYVKHIKNKSYFEVQVSKEVLPYYVELAQNFTSYSMTVAilKSTFSQRFYELCCQYRNAGFFftVEKLREMFMLEKKYkdFKRRvqKELRELYNAG------------------------------------------------------------------------
183 UniRef50_D2QW11 Initiator RepB protein n=2 ... 45 0.004 1 12.6% 41:318 1:279 ----------------------------------------MNININKSDSLQMSQSVSIRQHNAITTARYEYSELQ----LDLFFYLLSILRKDKTDG-VYEIVVKDLSTLTGKEYK------YGYLKKATEEMGSRMFEVSTPKSYEQLW----MFQRVKYVIGEGRIEVRLSDDiyLFDLKDNFTSFELYAALRL-GSKYAKRLYTLCSQWNDKGEtyKIPELKKMLSLLDDKGnfKrvLDEAKKQINeiDYTLYKRGRSFQSVSFTIKRQPLAIVLPVEDKSIKGGATLAGVSDAQYQNARL-LLEKWNIKRADV-------
184 UniRef50_Q6TF94 Putative replication protei... 44 0.006 1 14.9% 94:207 20:126 ---------------------------------------------------------------------------------------------SQDQGIVFETTRREILLAAGLS---DAGDNYCRLADSLYRLSQVGCRVKKATVDWSMnlSYRLIKNPGCDN----IHIAMNSRFASALMGGQKVIINLAERRKLTG-DVTQLLH----------------------------------------------------------------------------------------------------------------------
185 UniRef50_A6WB38 Plasmid encoded RepA protei... 44 0.007 1 16.2% 171:281 169:285 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTLSAELYEEV-THRPVPVDIGALRLLRGSPLRLDVYTWlmSYLRKPVVVTWEQLRFQFGTQVStrHFRADFSEALRWVLAIYREAKVDEVGNGIRLRPSPPHVGRGKRPA--------------------------------------------
186 UniRef50_Q6R586 Replication protein A n=1 T... 42 0.031 1 12.9% 119:281 71:237 ----------------------------------------------------------------------------------------------------------------------DNANHYDRVKDAFLRLNDKKFEF----QDDDSWSIIRIIESPEIVggNSIVRFRLHKRIFDAFLdkGYRKYEIKVAMEFK-SEYSMRFYELFSG-KKEPIIYDIEELKKMfgKYQKSSDfkRVIDTAQKELTEKAPYSFKYETIKTGRRFTHIKFKPFSIPKN--------------------------------------------
187 UniRef50_B5ZM92 Initiator RepB protein n=1 ... 41 0.042 1 17.1% 125:317 17:222 ----------------------------------------------------------------------------------------------------------------------------ERIEASLLRLMGTIAIVTIRKDGKSYKRRVQLLgsDESLEKDGFLHYRIPEELIEILQneVYARLKTQVMYCFESKYT-LCLYEMTERRIGLEYkfTIEELRGLLNvdGKLERfkYCLKVATEEINkpFYVDFSPIKKGRKVERIAFHWFPKTSSGKRDAQILIDQHRIvrAKLRGLAAELPLLLDFGTEPPE--------
consensus/100% .....................................................................................................................................................................................................................................................................................................................................
consensus/90% .........................................................................................................thh..............h..h..th.th....h.h...............h.............h.h...hh..h.......h.............t..lh.hh.........h.h..h.............t..h...h.....................................................................
consensus/80% ............................................................................hh..h...h.tt......htht..thht.hth.....t.t.ht.lttthtcl.ts.htht....t......hthhtt..h..ttt.h.l.hs..hh..h..t....hpht..h.h.tt.hth.la.hh.th.tt.h.hthttlht.hs.tt..tthpt.htthhtt.......................................................
consensus/70% ......................................................................lhh.hht.h.ptt..s..lthsh.phhp.hsh.....ttt.hptlppslpRLtsstlphp.tttt.ttth.hthlpphthttptt.htltls.thhphh..pthh.lphphhh.h.tpshshtlathhtph.tp.h.hshtpLttthu.ptthpphcttlpthhppl....h.......tt..............................
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