 |
| Job Description | Q57154 | | Confidence | 32.42% | Date | Thu Jan 5 12:37:14 GMT 2012 |
| Rank | 48 | Aligned Residues | 46 |
| % Identity | 20% | Template | c2k4bA_ |
| PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:transcriptional regulator; |
PDBTitle: copr repressor structure
|
| Resolution | UNK |
|
|   |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | I | S | L | A | R | L | R | A | R | L | N | L | K | S | P | V | F | S | Q | N | Q | T | V | R | R | A | M | E | Q | L | R | E | I | G | Y | L | D | Y | T | E | I | Q | R | G | R | T | K | F | F |
| Query Conservation |   |
|
|
|   |   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   | . | . |   |
|
|
|   |
|   |
|   |
|
|   |   |
|
|   |
|   |   |   | . | . |
|   |
|
|   |   |   |
|
| Template Sequence |   |
E | A | R | V | D | E | I | Y | A | Q | I | P | Q | E | L | E | W | S | . |
. |
L | A | T | V | K | T | L | L | G | R | L | V | K | K | E | M | L | S | T | E | . |
. |
K | E | G | R | K | F | V | Y |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T |
|
| G | G | G |
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  | . | . |  |  | T | T |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |
|
|
|
|  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
|
. | . | . | 90 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|