357 d1skye3 Probab=96.39   E-value=0.022  Score=32.12  Aligned_columns=125  Identities=18%

Q ss_pred             HHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEEC----------
Q ss_conf             9998711458759982898758999999999850555665278998337886257652000678623773----------
Q batch____       186 TILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRK----------  255 (459)
Q Consensus       186 ~~~~~l~~~~~ilL~GppGtGKT~la~~lA~~l~~~~~~~~~~~v~~~~~~~~~~~i~g~~~~~~~~~~~----------  255 (459)
                      ..+..+....-+++.|+||+|||.++..+|.....+.....+..---...-...+++......+.-.+..          
T Consensus        61 D~l~Pig~GQr~~I~g~~g~GKt~L~~~i~~~~~~~~~~~~V~~liGer~~Ev~e~~~~~~~~~~~~~tvvv~st~d~~~  140 (274)
T d1skye3          61 DLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPP  140 (274)
T ss_dssp             HHHSCEETTCEEEEECCSSSCHHHHHHHHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHHHTSGGGGEEEEEECTTSCH
T ss_pred             HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCH
T ss_conf             87510035872768658888988999999998853079749999238987789999999750882131399991778999


Q ss_pred             ------CCHHHHHHHHHHHCCCCCEEEEEECCC-------------------CCCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             ------876999999987134688699981011-------------------1285544678898623344443211000
Q batch____       256 ------DGIFYNFCQQAKEQPEKKYIFIIDEIN-------------------RANLSKVFGEVMMLMEHDKRGENWSVPL  310 (459)
Q Consensus       256 ------~g~~~~~~~~a~~~~~~~~vlilDEin-------------------~a~~~~~f~~~l~lle~~~~~~~~~~~~  310 (459)
                            .-.-...++.-..+..+..++++|-+.                   .+-+..+|..+-.++|...+.+..+.+.
T Consensus       141 ~~r~~~~~~a~~~AE~~r~e~G~~Vlli~Dsltr~A~A~rei~~~~ge~p~~~g~p~~~~~~~~~l~erag~~~~GSiT~  220 (274)
T d1skye3         141 GARMRVALTGLTMAEYFRDEQGQDGLLFIDNIFRFTQAGSEVSALLGRMPSAIGYQPTLATEMGQLQERITSTAKGSITS  220 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCEEEEEEECTHHHHHHHHHHHHHHTCCCCGGGCCTTHHHHHHHHHTTSSCBSSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             99999999999999998750898299997490799999987644237865333350566544789998613689984899