65 d1in4a2 Probab=99.21   E-value=2.4e-09  Score=72.04  Aligned_columns=144  Identities=22%

Q ss_pred             HHHHCCCHHHHHHHHHHH-------CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCC
Q ss_conf             433235888999999871-------1458759982898758999999999850555665278998337886257652000
Q batch____       174 LNDLFIPETTIETILKRL-------TIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYR  246 (459)
Q Consensus       174 ~~~~~~~~~~~~~~~~~l-------~~~~~ilL~GppGtGKT~la~~lA~~l~~~~~~~~~~~v~~~~~~~~~~~i~g~~  246 (459)
                      .+.+..++...+.+...+       ...+++||+||||||||++|+.+|..++..     +..+..+.............
T Consensus         8 ~~~iiG~~~~~~~l~~~i~~~~~~~~~~~~iLl~GppG~GKT~la~~ia~~l~~~-----~~~~~~~~~~~~~~~~~~~~   82 (223)
T d1in4a2           8 LDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTN-----IHVTSGPVLVKQGDMAAILT   82 (223)
T ss_dssp             GGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCC-----EEEEETTTCCSHHHHHHHHH
T ss_pred             HHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-----EEEEEECCEEEECCCHHHHH
T ss_conf             8780360999999999999987368757738997589978647999999984898-----79984100011000012355


Q ss_pred             CCCCCEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             67862377387699999998713468869998101112855446788986233444432110000134655455688986
Q batch____       247 PNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENV  326 (459)
Q Consensus       247 ~~~~~~~~~~g~~~~~~~~a~~~~~~~~vlilDEin~a~~~~~f~~~l~lle~~~~~~~~~~~~~~~~~~~~~~~ip~Nl  326 (459)
                                            ......++++||++....+ ..+.++..++......                   ..+
T Consensus        83 ----------------------~~~~~~~~~~D~~~~~~~~-~~~~~~~~l~~~~~~~-------------------~~~  120 (223)
T d1in4a2          83 ----------------------SLERGDVLFIDEIHRLNKA-VEELLYSAIEDFQIDI-------------------QPF  120 (223)
T ss_dssp             ----------------------HCCTTCEEEEETGGGCCHH-HHHHHHHHHHTSCCCC-------------------CCC
T ss_pred             ----------------------HHCCCCCEECCCCCCCCHH-HHHHHHHHHHCCCCCC-------------------CCE
T ss_conf             ----------------------5303550110000024888-9999999984010022-------------------780


Q ss_pred             EEEEEECCHHHCCCCCCHHHHHCCCEEECCCCHHHHHHHHHH
Q ss_conf             999831700112334647786124368625861234455431
Q batch____       327 YIIGLMNTADRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFL  368 (459)
Q Consensus       327 ~IIgT~N~~d~s~~~ld~Al~RRF~~i~i~p~~~~~~~~~~~  368 (459)
                      .++++++..+.    ...+..+|+.....-+.+..+....+.
T Consensus       121 ~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~il  158 (223)
T d1in4a2         121 TLVGATTRSGL----LSSPLRSRFGIILELDFYTVKELKEII  158 (223)
T ss_dssp             EEEEEESCGGG----SCHHHHTTCSEEEECCCCCHHHHHHHH
T ss_pred             EEEEECCCCCC----CCCHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             69996068532----340233210000224699989999999