296 c3ly5A_ Probab=96.87   E-value=0.0067  Score=35.10  Aligned_columns=143  Identities=15%

Q ss_pred             HHHHHHHCCCCCEEEEECCCCCHHHH-------------------------------HHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf             99998711458759982898758999-------------------------------99999985055566527899833
Q batch____       185 ETILKRLTIKKNIILQGPPGVGKTFV-------------------------------ARRLAYLLTGEKAPQRVNMVQFH  233 (459)
Q Consensus       185 ~~~~~~l~~~~~ilL~GppGtGKT~l-------------------------------a~~lA~~l~~~~~~~~~~~v~~~  233 (459)
                      ...+..+..++++++.+|+|+|||..                               |..++..+..-.....+......
T Consensus        32 ~~ai~~ll~g~~viv~a~tgsGKT~~~~l~~l~~l~~~~~~~~~~~~~iii~P~~~L~~q~~~~~~~~~~~~~~~~~~~~  111 (211)
T c3ly5A_          32 HKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIM  111 (211)
T ss_dssp             HHHHHHHHHTCCCEECCCTTSCHHHHHHHHHHHHHHHTTCCGGGCCCEEEECSSHHHHHHHHHHHHHHTTTCCSCEEEEC
T ss_pred             HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             99999996799799997799722589999999999730000135874279715303289999999998645396068887


Q ss_pred             CCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH-CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             78862576520006786237738769999999871-34688699981011128554467889862334444321100001
Q batch____       234 QSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKE-QPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTY  312 (459)
Q Consensus       234 ~~~~~~~~i~g~~~~~~~~~~~~g~~~~~~~~a~~-~~~~~~vlilDEin~a~~~~~f~~~l~lle~~~~~~~~~~~~~~  312 (459)
                      ......+...............++.+...+..... ....-..+++||.++..-.....++..+++.             
T Consensus       112 ~~~~~~~~~~~~~~~~~i~i~tp~~l~~~l~~~~~~~~~~l~~iViDE~~~l~~~~~~~~~~~i~~~-------------  178 (211)
T c3ly5A_         112 GGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL-------------  178 (211)
T ss_dssp             SSSCHHHHHHHHHHCCSEEEECHHHHHHHHHHCTTCCCTTCCEEEECSHHHHHHTTCHHHHHHHHHH-------------
T ss_pred             ECCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHH-------------
T ss_conf             3377158888402788279846689999996125320054218997305883245869999999997-------------


Q ss_pred             CCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHHHC
Q ss_conf             3465545568898699983170011233464778612
Q batch____       313 SENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRR  349 (459)
Q Consensus       313 ~~~~~~~~~ip~Nl~IIgT~N~~d~s~~~ld~Al~RR  349 (459)
                               +|++..+++++-|.......+-+.+.++
T Consensus       179 ---------l~~~~q~v~~SAT~~~~~~~l~~~~l~~  206 (211)
T c3ly5A_         179 ---------LPTRRQTMLFSATQTRKVEDLARISLKK  206 (211)
T ss_dssp             ---------SCSSSEEEEECSSCCHHHHHHHHHHCSS
T ss_pred             ---------CCCCCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf             ---------5999979999867998999999986089