Phyre 2 alignment of P15005 with c1yj5B_

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Job Description | P15005
Confidence | 96.68% | Date | Thu Jan 5 11:34:08 GMT 2012
Rank | 322 | Aligned Residues | 23
% Identity | 22% | Template | c1yj5B_
PDB info | PDB header:transferase | Chain: B: PDB Molecule:5' polynucleotide kinase-3' phosphatase catalytic domain; | PDBTitle: molecular architecture of mammalian polynucleotide kinase, a dna2 repair enzyme
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | .
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Query Sequence |  | I | I | L | Q | G | P | P | G | V | G | K | T | F | V | A | R | R | L | A | Y | L | L | T
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Template Sequence |  | V | V | A | V | G | F | P | G | A | G | K | S | T | F | I | Q | E | H | L | V | S | A | G
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  | T | G | G | G | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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