289 c3dm5A_ Probab=97.94   E-value=0.00013  Score=45.54  Aligned_columns=149  Identities=12%

Q ss_pred             CHHHHHHHHHHHHH----------------HHHHHHHHHHHHHH------HHCCCCCEEEEECCCCCCHHHHHHHHH---
Q ss_conf             76779999999998----------------68999999999988------511369579998189889989999984---
Q batch____         3 NSEGLKSFQQSLAD----------------LPQWVSERLLQQIN------QLTNYEPVIGIMGKTGVGKSSLCNALF---   57 (287)
Q Consensus         3 ~~~~~~~~~~~l~~----------------l~~~~~~~~~~~~~------~~~~~~p~Ial~G~~~~GKSTLiNaL~---   57 (287)
                      +.+..+++.+++..                +...+.+.+.+.+.      .....+.+|+++|.+|+||||.+-.|.   
T Consensus        45 ~~~~v~~~~~~ik~~~~~~~~~~~~~~~~~i~~~v~~eL~~~l~~~~~~~~~~~~p~vI~~vG~~G~GKTTT~aKLA~~~  124 (416)
T c3dm5A_          45 NVRLVLQLTREIQRRALEEKPPAGISKKEHIIKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYF  124 (416)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCCTTCCHHHHHHHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             98999999999999962022577899899999999999998617764333346896499997058877346899999999


Q ss_pred             --------------------------CCCCCCCCCCCCCCCCCEEEEEE------ECCEEEEEEECCCCCCCCCHHHHHH
Q ss_conf             --------------------------76000235657764341899996------2893699984146566652148999
Q batch____        58 --------------------------AGDISPVSDVAACTREPLRFRLQ------VGDRYITLMDLPGVGESGARDTEYA  105 (287)
Q Consensus        58 --------------------------g~~~~~v~~~~~tt~~~~~~~~~------~~~~~i~l~d~pg~~~~~~~~~~~~  105 (287)
                                                +...-.......+..++......      ..+..+.++||+|........-...
T Consensus       125 ~~~g~kv~li~aDt~R~aA~eQL~~~a~~~~vp~~~~~~~~d~~~i~~~ai~~~~~~~~DvIlIDTaGR~~~d~~lm~EL  204 (416)
T c3dm5A_         125 QKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEM  204 (416)
T ss_dssp             HTTTCCEEEEECCCSSTHHHHHHHHHHGGGTCEEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHH
T ss_pred             HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHH
T ss_conf             95699189996188670169999999886099158548857889999999999996799899981888879988999999


Q ss_pred             HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHH
Q ss_conf             999984100791799983578899889999999987306995999840022
Q batch____       106 ALYREQLPRLDLVLWLIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSD  156 (287)
Q Consensus       106 ~~~~~~~~~~d~v~~vvd~~~~~~~~~~~~~~~~~~~~~~~~~i~V~nk~D  156 (287)
                      ........ +|.+++|+|++.+..  .......+.....-..+|+  ||.|
T Consensus       205 ~~i~~~~~-p~~vllV~dA~~gq~--a~~~a~~F~~~i~i~gvIl--TKlD  250 (416)
T c3dm5A_         205 KQISNVIH-PHEVILVIDGTIGQQ--AYNQALAFKEATPIGSIIV--TKLD  250 (416)
T ss_dssp             HHHHHHHC-CSEEEEEEEGGGGGG--HHHHHHHHHHSCTTEEEEE--ECCS
T ss_pred             HHHHHHCC-CCEEEEEECCCCCHH--HHHHHHHHHHCCCCCEEEE--ECCC
T ss_conf             99984148-421999822678788--9999999973089976999--7245