280 c1vmaA_ Probab=98.23   E-value=2e-05  Score=50.39  Aligned_columns=150  Identities=19%

Q ss_pred             CHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCC-------------------------CCCEEEEECCCCCCHHHHHHH
Q ss_conf             767799999999--98689999999999885113-------------------------695799981898899899999
Q batch____         3 NSEGLKSFQQSL--ADLPQWVSERLLQQINQLTN-------------------------YEPVIGIMGKTGVGKSSLCNA   55 (287)
Q Consensus         3 ~~~~~~~~~~~l--~~l~~~~~~~~~~~~~~~~~-------------------------~~p~Ial~G~~~~GKSTLiNa   55 (287)
                      +.+.+.++.+.|  ..+.....+++.+++.....                         .+-+|+++|.+|+||||.+-.
T Consensus        32 ~~~~~~eL~~~Ll~~~v~~~la~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vi~~~Gp~G~GKTTt~ak  111 (294)
T c1vmaA_          32 DDETREELEELLIQADVGVETTEYILERLEEKDGDALESLKEIILEILNFDTKLNVPPEPPFVIMVVGVNGTGKTTSCGK  111 (294)
T ss_dssp             CHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHTCSCCCCCCCSSSCEEEEEECCTTSSHHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH
T ss_conf             88999999999997699989999999973413155899999999985043210023578966999980688760248999


Q ss_pred             HH------CCCCCCCCCCC----------------CCCCCCEEEEEE-------------ECCEEEEEEECCCCCCCCCH
Q ss_conf             84------76000235657----------------764341899996-------------28936999841465666521
Q batch____        56 LF------AGDISPVSDVA----------------ACTREPLRFRLQ-------------VGDRYITLMDLPGVGESGAR  100 (287)
Q Consensus        56 L~------g~~~~~v~~~~----------------~tt~~~~~~~~~-------------~~~~~i~l~d~pg~~~~~~~  100 (287)
                      |.      |..++.++.-.                +.........-+             ..+..+.++||+|.......
T Consensus       112 lA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~  191 (294)
T c1vmaA_         112 LAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKN  191 (294)
T ss_dssp             HHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHHHHTTCSEEEEEECCCCSCHHH
T ss_pred             HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
T ss_conf             99999967994899975876864799999999761982897488369899999999999977998999818889878579


Q ss_pred             HHHHHHHHHHHHHC-----CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHH
Q ss_conf             48999999984100-----791799983578899889999999987306995999840022
Q batch____       101 DTEYAALYREQLPR-----LDLVLWLIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSD  156 (287)
Q Consensus       101 ~~~~~~~~~~~~~~-----~d~v~~vvd~~~~~~~~~~~~~~~~~~~~~~~~~i~V~nk~D  156 (287)
                      .-.....+......     .|.+++|++++.+ ...-.++..........   -+++||.|
T Consensus       192 ~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~-~~~~~~~~~~~~~~~~~---~iIlTKlD  248 (294)
T c1vmaA_         192 LMEELRKVHRVVKKKIPDAPHETLLVIDATTG-QNGLVQAKIFKEAVNVT---GIILTKLD  248 (294)
T ss_dssp             HHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGH-HHHHHHHHHHHHHSCCC---EEEEECGG
T ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHCCCCC---EEEEECCC
T ss_conf             99999999999630356688539998114687-89999999996308997---69997444