282 c1tndA_ Probab=98.12   E-value=6.4e-05  Score=47.41  Aligned_columns=174  Identities=10%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCC-------------------------------------------
Q ss_conf             3695799981898899899999847600023565776-------------------------------------------
Q batch____        34 NYEPVIGIMGKTGVGKSSLCNALFAGDISPVSDVAAC-------------------------------------------   70 (287)
Q Consensus        34 ~~~p~Ial~G~~~~GKSTLiNaL~g~~~~~v~~~~~t-------------------------------------------   70 (287)
                      .++.+|.++|..+|||||+++-+-=-.....+...-.                                           
T Consensus         1 ~~~ikiLlLG~~eSGKST~~KQ~k~i~~~~f~~~E~~~~~~~I~~Nii~~~~~ll~~~~~~~i~~~~~~~~~~~~~~~~~   80 (323)
T c1tndA_           1 ARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHM   80 (323)
T ss_dssp             CEEEEEEEECSTTSSHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTHHHHHHHHHHH
T ss_pred             CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf             95489999738988888999999999678999899998799999999999999999998709998882136879998730


Q ss_pred             ----------------------------------------------------------------------CCCCEEEEEE
Q ss_conf             ----------------------------------------------------------------------4341899996
Q batch____        71 ----------------------------------------------------------------------TREPLRFRLQ   80 (287)
Q Consensus        71 ----------------------------------------------------------------------t~~~~~~~~~   80 (287)
                                                                                            |.....+.+.
T Consensus        81 ~~~~~~~~~~~e~~~~I~~LW~d~~iq~~~~r~~e~~l~d~~~YFl~~i~RI~~~~Y~Pt~~Dil~~r~~T~Gi~~~~f~  160 (323)
T c1tndA_          81 ADTIEEGTMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFS  160 (323)
T ss_dssp             TTTSCTTCCCHHHHHHHHHHHHSHHHHHHHTTGGGSCCCTTHHHHHTTHHHHTSTTCCCCHHHHHHCCCCCCSEEEEEEE
T ss_pred             CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEE
T ss_conf             13456222598999999998569899999873541042222456676678741545477864458985350241799997


Q ss_pred             ECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC-----------HHHHHHHHHHHH--HHCCCC
Q ss_conf             2893699984146566652148999999984100791799983578899-----------889999999987--306995
Q batch____        81 VGDRYITLMDLPGVGESGARDTEYAALYREQLPRLDLVLWLIKADDRAL-----------TVDEHFYHQVIG--EVYRHK  147 (287)
Q Consensus        81 ~~~~~i~l~d~pg~~~~~~~~~~~~~~~~~~~~~~d~v~~vvd~~~~~~-----------~~~~~~~~~~~~--~~~~~~  147 (287)
                      +++..+.++|+.|-       ......+......+++|+||++.++...           .....+++.+..  ...+.|
T Consensus       161 ~~~~~~~~~DvgGq-------~~~R~kW~~~f~~v~~iifvv~lsd~d~~~~e~~~~nrl~esl~~f~~i~~~~~~~~~~  233 (323)
T c1tndA_         161 FKDLNFRMFDVGGQ-------RSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTS  233 (323)
T ss_dssp             ETTEEEEEEEECCS-------HHHHGGGGGGCTTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCSGGGSCE
T ss_pred             ECCEEEEEEECCCC-------CCCCHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCC
T ss_conf             35704889977898-------74332368873699889999781141442225674035899999999982796877997


Q ss_pred             EEEECCHHHCCCCC-------------CHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHC
Q ss_conf             99984002236642-------------00110578989979999976764116885289751588488788999999842
Q batch____       148 VLFVISQSDKAEPT-------------SGGGQLSTAQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCL  214 (287)
Q Consensus       148 ~i~V~nk~D~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~l~~L~~~l~~~l  214 (287)
                      +++++||.|.....             ...........--....................++|....+++.+++.+.+.+
T Consensus       234 iil~lNK~Dif~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~~~~~~t~a~d~~~i~~v~~~v~~~i  313 (323)
T c1tndA_         234 IVLFLNKKDVFSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDII  313 (323)
T ss_dssp             EEEEEECHHHHHHHHTTSCGGGTCTTCCSCCCHHHHHHHHHHHHHTTCTTBTTBCCEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred             EEEEECCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHH
T ss_conf             89993255899876044883440678899789899999999999985237789738999985110689999999999999