09/01/2012 02:25:23 : INFO  : Run start: Mon Jan  9 02:25:23 GMT 2012
09/01/2012 02:25:25 : INFO  : Initialised job
09/01/2012 02:25:25 : INFO  : Renaming log file 'phyre2_20120109_022523.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/phyre_20120109_022523.log'
09/01/2012 02:25:26 : INFO  : Initialised job:
Sequence
>batch____
MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGK
VRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESN
KKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQ
KLLK

09/01/2012 02:25:26 : INFO  : Checked sequence
09/01/2012 02:25:27 : INFO  : Finding homologues with PSI-BLAST
09/01/2012 02:25:27 : INFO  : PSI-BLAST 3 iterations
09/01/2012 02:26:16 : INFO  : PSI-BLAST 5 iterations
09/01/2012 02:26:55 : INFO  : Finished PSI-BLAST
09/01/2012 02:26:55 : INFO  : Running Buildali to generate a3m file
09/01/2012 02:28:32 : INFO  : Converting to HMM
09/01/2012 02:28:32 : INFO  : Calibrating HMM
09/01/2012 02:28:39 : INFO  : Searching HMM database
09/01/2012 02:32:27 : INFO  : Finished buildali
09/01/2012 02:32:28 : INFO  : Predicting secondary structure
09/01/2012 02:32:30 : INFO  : Predicted secondary structure (PSI-Pred)
09/01/2012 02:32:31 : INFO  : Predicting Disordered regions
09/01/2012 02:32:32 : INFO  : Predicted Disorder (Disopred)
09/01/2012 02:32:32 : INFO  : Running memsat_svm check
09/01/2012 02:34:27 : INFO  : Globular protein
09/01/2012 02:34:27 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a9ebe462ba25bd39'
09/01/2012 02:34:28 : INFO  : Initialising fold library search
09/01/2012 02:34:29 : INFO  : Initialised search input
09/01/2012 02:34:29 : INFO  : Building Ensemble models
09/01/2012 02:34:31 : INFO  : Building hh.d1st9a_.model.1.pdb
09/01/2012 02:34:35 : INFO  : Building hh.c3kh7A_.model.2.pdb
09/01/2012 02:34:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/hh.c3kh7A_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/c3kh7A_.2.pdb
09/01/2012 02:34:40 : INFO  : Building hh.c2hyxA_.model.3.pdb
09/01/2012 02:34:44 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/hh.c2hyxA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/c2hyxA_.3.pdb
09/01/2012 02:34:45 : INFO  : Building hh.c3hdcA_.model.4.pdb
09/01/2012 02:34:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/hh.c3hdcA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/c3hdcA_.4.pdb
09/01/2012 02:34:50 : INFO  : Building hh.c3lorB_.model.5.pdb
09/01/2012 02:34:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/hh.c3lorB_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/c3lorB_.5.pdb
09/01/2012 02:34:55 : INFO  : Building hh.d1knga_.model.6.pdb
09/01/2012 02:34:58 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/hh.d1knga_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a9ebe462ba25bd39/d1knga_.7.pdb
09/01/2012 02:34:59 : INFO  : Building d1st9a_.1.pdb
09/01/2012 02:35:04 : INFO  : Building c3kh7A_.2.pdb
09/01/2012 02:35:08 : INFO  : Building c2hyxA_.3.pdb
09/01/2012 02:35:12 : INFO  : Building c3hdcA_.4.pdb
09/01/2012 02:35:17 : INFO  : Building c3lorB_.5.pdb
09/01/2012 02:35:21 : INFO  : Building d2cvba1.6.pdb
09/01/2012 02:35:25 : INFO  : Building d1knga_.7.pdb
09/01/2012 02:35:29 : INFO  : Building c3gl3D_.8.pdb
09/01/2012 02:35:34 : INFO  : Building c3kcmC_.9.pdb
09/01/2012 02:35:38 : INFO  : Building c3drnB_.10.pdb
09/01/2012 02:35:42 : INFO  : Building c3hczA_.11.pdb
09/01/2012 02:35:47 : INFO  : Building d2b5xa1.12.pdb
09/01/2012 02:35:51 : INFO  : Building c3ha9A_.13.pdb
09/01/2012 02:35:55 : INFO  : Building c2l5oA_.14.pdb
09/01/2012 02:35:59 : INFO  : Building c3lwaA_.15.pdb
09/01/2012 02:36:04 : INFO  : Building d1e2ya_.16.pdb
09/01/2012 02:36:08 : INFO  : Building c2b1kA_.17.pdb
09/01/2012 02:36:12 : INFO  : Building c3fkfC_.18.pdb
09/01/2012 02:36:17 : INFO  : Building d2fy6a1.19.pdb
09/01/2012 02:36:21 : INFO  : Building d1jfua_.20.pdb
09/01/2012 02:37:00 : INFO  : Finished HH model building
09/01/2012 02:37:00 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
09/01/2012 02:37:58 : INFO  : html domain output complete ID 'a9ebe462ba25bd39'
09/01/2012 03:12:00 : INFO  : Run end  : Mon Jan  9 03:12:00 GMT 2012
