10 c1jalA_ Probab=99.96   E-value=1.7e-28  Score=198.79  Aligned_columns=162  Identities=34%

Q ss_pred             EEECCCCCCCHHHHHHHHHCCCCEECCCCCCCEEEEEEEEEECCCE----------------EEEEEECCCCCCCCHHHH
Q ss_conf             2431499888999999984898222475765242368999968913----------------899997776303400100
Q batch____       162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK----------------SFVVADIPGLIEGAAEGA  225 (390)
Q Consensus       162 VgLVG~PNaGKSSLln~Lt~~k~~Ia~~pfTTl~p~~g~i~~~~~~----------------~i~l~DtPGli~~a~~~~  225 (390)
                      |||||+||||||||+|+||+      ++||||+.|+.|++.+.+.+                ++.++|||||+++++.++
T Consensus         5 iglvG~pn~GKSTl~n~LT~------~~pf~Ti~pn~g~v~v~d~~~~~~~~~~~~~~~~~~~i~liD~pGl~~~a~~g~   78 (348)
T c1jalA_           5 CGIVGLPNVGKSTLFNALTK------AGPFCTIEPNTGVVPMPDPRLDALAEIVKPERILPTTMEFVDIAGLVAGASKGE   78 (348)
T ss_dssp             EEEECCTTSSHHHHHHHHHH------TCCCCCCCCCSSEEECCCHHHHHHHHHHCCSEEECCEEEEEECCSCCTTHHHHG
T ss_pred             EEEEECCCCCHHHHHHHHHC------CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCH
T ss_conf             99963889889899999957------898643366206999568675200012355545780599997576557864210


Q ss_pred             HHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----------------------------
Q ss_conf             699999998753888999804888778048999999998645311232101-----------------------------
Q batch____       226 GLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK-----------------------------  276 (390)
Q Consensus       226 ~lg~~flrhier~~~il~viD~~~~~~~~~~~~~~~l~~el~~~~~~l~~k-----------------------------  276 (390)
                      +++..||.++++||+++||+|++..  .+|.+++..+..|+...+.....+                             
T Consensus        79 ~~~~~~l~~ir~aD~ii~Vvd~~~~--~dp~~d~~~i~~EL~~~d~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~~i~~~  156 (348)
T c1jalA_          79 GLGNKFLANIRETDAIGHVVRCFEN--IDPLDDIDTINTELALADLDSCERAIQRLQKRAKGGDKEAKFELSVMEKILPV  156 (348)
T ss_dssp             GGTCCHHHHHHTCSEEEEEEECSCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCEEEEEECCCCC--CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             3799999999748989999505889--98789999999999860888763127888642102566521368999999973


Q ss_pred             -----------------------------CCHHCCCCCCC-CCCCCHHHHHHHHHHHHCCCCEEEEEECC----------
Q ss_conf             -----------------------------22001443100-15211699999999972899749998678----------
Q batch____       277 -----------------------------PRWLVFNKIDL-LDKVEAEEKAKAIAEALGWEDKYYLISAA----------  316 (390)
Q Consensus       277 -----------------------------~~ivvlNK~Dl-~~~~~~~~~~~~l~~~~~~~~~ii~iSA~----------  316 (390)
                                                   |.++++||.|. .......+.+..+.+..  ..+++++||+          
T Consensus       157 l~~~~~~~~~~l~~~e~~~l~~~~~l~~KP~i~v~Nk~d~~~~~~~~~~~i~~~~~~~--~~~vi~vsa~~E~el~~l~~  234 (348)
T c1jalA_         157 LENAGMIRSVGLDKEELQAIKSYNFLTLKPTMYIANVNEDGFENNPYLDRVREIAAKE--GAVVVPVCAAIESEIAELDD  234 (348)
T ss_dssp             HHTTCCGGGSCCCHHHHHHHGGGCCSTTSCEEEEEECCTTCSSSCHHHHHHHHHHHHT--TCEEEEECHHHHHHGGGSCS
T ss_pred             HCCCCCCCCCCCCHHHHHHHHHCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCC--CCCEEEECHHHHHHHHHCCH
T ss_conf             1024433334689889999864331100788999971103655323789999985137--98299973899998873375


Q ss_pred             ------------CCCCHHHHHHHHHHHHH
Q ss_conf             ------------88899999999999743
Q batch____       317 ------------SGLGVKDLCWDVMTFII  333 (390)
Q Consensus       317 ------------~g~Gid~L~~~I~~~L~  333 (390)
                                  ++.+++.|...+++.|.
T Consensus       235 ~e~~~~l~~~~i~~~~l~~l~~~~~~~L~  263 (348)
T c1jalA_         235 EEKVEFLQDLGIEEPGLNRVIRAGYALLN  263 (348)
T ss_dssp             STTHHHHTTSSCCSCTTHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf             56688776708762148999999985218