Job Description P37685 Confidence 15.24% Date Thu Jan 5 11:57:00 GMT 2012 Rank 73 Aligned Residues 137 % Identity 15% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	L	L	L	M	E	I	V	G	D	L	L	P	P	G	V	V	N	V	V	N	G	A	G	G	V	I	G	E	Y	L	A	T	S	K	R	I	A	K	V	A	F	T	G	S	T	E	V	G	Q	Q	I	M	Q	Y	A	T	Q	N	I	I	P	V	T	L	E	L	G	G	K	S	P	N	I	F	F	A	D
Query Conservation
Alig confidence																																						.																																						.	.	.	.	.	.
Template Conservation																																						.																																						.	.	.	.	.	.
Template Sequence		L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	R	A	A	A	L	R	L	Q	R	M	.	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	M	N	S	I	.	.	.	.	.	.
Template Known Secondary structure																	T	T									S											.	T		S						G	G	G	T	T										T	T		S							T	T				.	.	.	.	.	.
Template Predicted Secondary structure																																						.																																						.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.										.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		V	M	D	E	E	D	A	F	F	D	K	A	L	E	G	F	A	L	F	A	F	N	Q	G	E	V	C	T	C	P	S	R	A	L	V	Q	.	.	.	.	.	.	.	.	.	E	S	I	Y	E	R	F	M	E	R	A	I	R	R	V	E	S	I	R	S	G	N	P	L	D	S	V	T	Q	M	G	A	Q	V	S
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.														.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.																																			.
Template Conservation		.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																																																				.
Template Sequence		.	.	.	.	.	.	E	S	I	K	K	S	V	E	I	I	R	E	A	.	.	.	.	.	.	.	.	.	G	V	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D	A	I	I	G	L	S	D	H	T	L	D	N	Y	A	C	L	G	.
Template Known Secondary structure		.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	T												S	S								T	T										T	T	S								S	S	S	S						.
Template Predicted Secondary structure		.	.	.	.	.	.														.	.	.	.	.	.	.	.	.																																																				.
Template SS confidence
								161	.	.	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	Q	L	E	T	I	L	N	Y	I	D	I	G	K	K	E	G	A	D	V	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	L	G	G	S	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															225	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions