96 c1vrdA_ Probab=56.63   E-value=14  Score=16.76  Aligned_columns=204  Identities=27%

Q ss_pred             CCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCE-EEECCC
Q ss_conf             5556788999988626928941388877675138456705899610277656689999999999999729955-651123
Q batch____       194 LPENITAEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADT-VMDLST  272 (631)
Q Consensus       194 i~e~i~pE~VR~~VA~G~~VIP~N~~h~~~~p~~IG~~~rtKVNANIGtS~~~~~i~~EieK~~~A~~~GADt-VMDLSt  272 (631)
                      ++...++|.+...+...+-..+.....+.......++.+   ++++++.+..      ..+++..+++.|+|. ..+.+.
T Consensus        66 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~  136 (321)
T c1vrdA_          66 IHKNLTPDEQARQVSIVKKTIMSVIEHPNAARDEKGRLL---VGAAVGTSPE------TMERVEKLVKAGVDVIVIDTAH  136 (321)
T ss_dssp             ECSSSCHHHHHHHHHHHHTCCHHHHTCTTCCBCTTSCBC---CEEEECSSTT------HHHHHHHHHHTTCSEEEECCSC
T ss_pred             ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE---ECCCCCCCHH------HHHHHHHHHHCCCCEEEECCCC
T ss_conf             326799899999999889766765532012553445202---1142678975------8999999973499848971788


Q ss_pred             CCCHH--HHHHHHHHH---CCCCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCEEEE--EHHHHHHHHHHHH
Q ss_conf             57789--999999973---7997234028999987148622289999999999998609857983--1244588877653
Q batch____       273 GRYIH--ETREWILRN---SPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTI--HAGVLLRYVPMTA  345 (631)
Q Consensus       273 Ggdl~--~iR~~il~~---spvPiGTVPIYqa~~~~~g~~~~lt~d~~~~~ie~qa~~GVDf~TI--H~Gi~~~~~~~~~  345 (631)
                      |....  +..+++-+.   .|+-++.|.-++.+.+.                   .+-|||++.|  |.|-.....+   
T Consensus       137 ~~~~~~~~~i~~l~~~~~~~pvivk~v~s~~~A~~a-------------------~~~Gad~I~v~g~gG~~~~~~~---  194 (321)
T c1vrdA_         137 GHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEAL-------------------IKAGADAVKVGVGPGSICTTRV---  194 (321)
T ss_dssp             CSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHH-------------------HHTTCSEEEECSSCSTTCHHHH---
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH-------------------HHCCCCEEEEECCCCCCCCCCC---
T ss_conf             882026889999997189106997577999999999-------------------9769989998077887666543---


Q ss_pred             HCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH--------
Q ss_conf             012231103089999999845888812765999999998719489941534888646788688899999999--------
Q batch____       346 KRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLG--------  417 (631)
Q Consensus       346 ~R~~gIVSRGGSi~a~WMl~~~~ENPly~~fD~ileI~~~yDVtlSLGDglRPG~i~Da~D~aQ~aEl~tlG--------  417 (631)
                                         ....--|..+-..++.+....+++.+=-.-|+|-|        .+++..+.||        
T Consensus       195 -------------------~~~~g~p~~~~l~~v~~~~~~~~ipIia~GGI~~g--------~dv~kaLalGAdaV~iG~  247 (321)
T c1vrdA_         195 -------------------VAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYS--------GDIVKALAAGAESVMVGS  247 (321)
T ss_dssp             -------------------HHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSH--------HHHHHHHHTTCSEEEESH
T ss_pred             -------------------CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCH--------HHHHHHHHCCCCEEEECH
T ss_conf             -------------------35656773899999999830189589996786899--------999999973888767681


Q ss_pred             -----------------HHHHHHHHHCCEEEEECCCCC--CHHHHHHHHHHHHHHHC
Q ss_conf             -----------------999999980993999489867--67788896999999738
Q batch____       418 -----------------ELTKIAWEYDVQVMIEGPGHV--PMQMIRRNMTEELEHCH  455 (631)
Q Consensus       418 -----------------eL~~rA~e~gVQvMIEGPGHV--Pl~~I~~nv~l~k~lc~  455 (631)
                                       .+.+.-|..+++-+++++++|  -++++...++....+|+
T Consensus       248 ~fl~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~elr~~m~~~G  304 (321)
T c1vrdA_         248 IFAGTEEAPGETILYQGRKYKAYRGMGIEGMVPYKGTVKDVVHQLVGGLRSGMGYIG  304 (321)
T ss_dssp             HHHTBTTSSSEEEEETTEEEEECBCCCCBCCEECCBCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             876202465310012672000003543343113601499999999999999999808